Diff of the two buildlogs: -- --- b1/build.log 2021-07-24 23:12:46.729071363 +0000 +++ b2/build.log 2021-07-24 23:45:39.066202835 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Fri Aug 26 17:32:39 -12 2022 -I: pbuilder-time-stamp: 1661578359 +I: Current time: Sun Jul 25 13:12:51 +14 2021 +I: pbuilder-time-stamp: 1627168372 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bullseye-reproducible-base.tgz] I: copying local configuration @@ -17,8 +17,8 @@ I: copying [./cmtk_3.3.1p1+dfsg-2.debian.tar.xz] I: Extracting source gpgv: unknown type of key resource 'trustedkeys.kbx' -gpgv: keyblock resource '/tmp/dpkg-verify-sig.JavJ5vPe/trustedkeys.kbx': General error -gpgv: Signature made Mon Nov 11 00:17:21 2019 -12 +gpgv: keyblock resource '/tmp/dpkg-verify-sig.mw_YFhnu/trustedkeys.kbx': General error +gpgv: Signature made Tue Nov 12 02:17:21 2019 +14 gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key @@ -33,137 +33,171 @@ dpkg-source: info: applying dcmtk-3.6.1-compatibility I: using fakeroot in build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/28914/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/703/tmp/hooks/D01_modify_environment starting +debug: Running on ionos12-i386. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +Removing 'diversion of /bin/sh to /bin/sh.distrib by dash' +Adding 'diversion of /bin/sh to /bin/sh.distrib by bash' +Removing 'diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by dash' +Adding 'diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by bash' +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/703/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/703/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='i386' - DEBIAN_FRONTEND='noninteractive' - DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all,-fixfilepath parallel=16' - DISTRIBUTION='' - HOME='/root' - HOST_ARCH='i386' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:hostcomplete:interactive_comments:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="1" [2]="4" [3]="1" [4]="release" [5]="i686-pc-linux-gnu") + BASH_VERSION='5.1.4(1)-release' + BUILDDIR=/build + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=i386 + DEBIAN_FRONTEND=noninteractive + DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all,-fixfilepath parallel=7' + DIRSTACK=() + DISTRIBUTION= + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=i686 + HOST_ARCH=i386 IFS=' ' - INVOCATION_ID='6681a35673e647ef9de14a8560bedf55' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - LD_LIBRARY_PATH='/usr/lib/libeatmydata' - LD_PRELOAD='libeatmydata.so' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='28914' - PS1='# ' - PS2='> ' + INVOCATION_ID=d142469c197e44e39a3174039867ee5b + LANG=C + LANGUAGE=de_CH:de + LC_ALL=C + LD_LIBRARY_PATH=/usr/lib/libeatmydata + LD_PRELOAD=libeatmydata.so + MACHTYPE=i686-pc-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=703 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/tmp.h5wwv4vIbH/pbuilderrc_znYH --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bullseye-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/tmp.h5wwv4vIbH/b1 --logfile b1/build.log cmtk_3.3.1p1+dfsg-2.dsc' - SUDO_GID='112' - SUDO_UID='107' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://85.184.249.68:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/tmp.h5wwv4vIbH/pbuilderrc_MHx2 --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bullseye-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/tmp.h5wwv4vIbH/b2 --logfile b2/build.log --extrapackages usrmerge cmtk_3.3.1p1+dfsg-2.dsc' + SUDO_GID=112 + SUDO_UID=107 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://78.137.99.97:3128 I: uname -a - Linux ionos16-i386 4.19.0-17-amd64 #1 SMP Debian 4.19.194-3 (2021-07-18) x86_64 GNU/Linux + Linux i-capture-the-hostname 4.19.0-17-686-pae #1 SMP Debian 4.19.194-3 (2021-07-18) i686 GNU/Linux I: ls -l /bin total 5776 - -rwxr-xr-x 1 root root 1367848 Jun 21 2021 bash - -rwxr-xr-x 3 root root 38280 Jul 20 2020 bunzip2 - -rwxr-xr-x 3 root root 38280 Jul 20 2020 bzcat - lrwxrwxrwx 1 root root 6 Jul 20 2020 bzcmp -> bzdiff - -rwxr-xr-x 1 root root 2225 Jul 20 2020 bzdiff - lrwxrwxrwx 1 root root 6 Jul 20 2020 bzegrep -> bzgrep - -rwxr-xr-x 1 root root 4877 Sep 4 2019 bzexe - lrwxrwxrwx 1 root root 6 Jul 20 2020 bzfgrep -> bzgrep - -rwxr-xr-x 1 root root 3775 Jul 20 2020 bzgrep - -rwxr-xr-x 3 root root 38280 Jul 20 2020 bzip2 - -rwxr-xr-x 1 root root 17768 Jul 20 2020 bzip2recover - lrwxrwxrwx 1 root root 6 Jul 20 2020 bzless -> bzmore - -rwxr-xr-x 1 root root 1297 Jul 20 2020 bzmore - -rwxr-xr-x 1 root root 38824 Sep 22 2020 cat - -rwxr-xr-x 1 root root 71624 Sep 22 2020 chgrp - -rwxr-xr-x 1 root root 67528 Sep 22 2020 chmod - -rwxr-xr-x 1 root root 75752 Sep 22 2020 chown - -rwxr-xr-x 1 root root 157960 Sep 22 2020 cp - -rwxr-xr-x 1 root root 128724 Dec 10 2020 dash - -rwxr-xr-x 1 root root 124904 Sep 22 2020 date - -rwxr-xr-x 1 root root 92172 Sep 22 2020 dd - -rwxr-xr-x 1 root root 100752 Sep 22 2020 df - -rwxr-xr-x 1 root root 153964 Sep 22 2020 dir - -rwxr-xr-x 1 root root 83644 Feb 7 2021 dmesg - lrwxrwxrwx 1 root root 8 Nov 6 2019 dnsdomainname -> hostname - lrwxrwxrwx 1 root root 8 Nov 6 2019 domainname -> hostname - -rwxr-xr-x 1 root root 34664 Sep 22 2020 echo - -rwxr-xr-x 1 root root 28 Nov 9 2020 egrep - -rwxr-xr-x 1 root root 34664 Sep 22 2020 false - -rwxr-xr-x 1 root root 28 Nov 9 2020 fgrep - -rwxr-xr-x 1 root root 71928 Feb 7 2021 findmnt - -rwsr-xr-x 1 root root 30112 Feb 26 2021 fusermount - -rwxr-xr-x 1 root root 210488 Nov 9 2020 grep - -rwxr-xr-x 2 root root 2346 Mar 2 2021 gunzip - -rwxr-xr-x 1 root root 6376 Mar 2 2021 gzexe - -rwxr-xr-x 1 root root 100952 Mar 2 2021 gzip - -rwxr-xr-x 1 root root 21916 Nov 6 2019 hostname - -rwxr-xr-x 1 root root 83980 Sep 22 2020 ln - -rwxr-xr-x 1 root root 55572 Feb 7 2020 login - -rwxr-xr-x 1 root root 153964 Sep 22 2020 ls - -rwxr-xr-x 1 root root 153124 Feb 7 2021 lsblk - -rwxr-xr-x 1 root root 96328 Sep 22 2020 mkdir - -rwxr-xr-x 1 root root 79912 Sep 22 2020 mknod - -rwxr-xr-x 1 root root 47048 Sep 22 2020 mktemp - -rwxr-xr-x 1 root root 58920 Feb 7 2021 more - -rwsr-xr-x 1 root root 50720 Feb 7 2021 mount - -rwxr-xr-x 1 root root 13856 Feb 7 2021 mountpoint - -rwxr-xr-x 1 root root 157996 Sep 22 2020 mv - lrwxrwxrwx 1 root root 8 Nov 6 2019 nisdomainname -> hostname - lrwxrwxrwx 1 root root 14 Apr 18 2021 pidof -> /sbin/killall5 - -rwxr-xr-x 1 root root 38824 Sep 22 2020 pwd - lrwxrwxrwx 1 root root 4 Jun 21 2021 rbash -> bash - -rwxr-xr-x 1 root root 46984 Sep 22 2020 readlink - -rwxr-xr-x 1 root root 75720 Sep 22 2020 rm - -rwxr-xr-x 1 root root 46984 Sep 22 2020 rmdir - -rwxr-xr-x 1 root root 22292 Sep 27 2020 run-parts - -rwxr-xr-x 1 root root 125036 Dec 22 2018 sed - lrwxrwxrwx 1 root root 4 Aug 26 03:46 sh -> dash - -rwxr-xr-x 1 root root 34696 Sep 22 2020 sleep - -rwxr-xr-x 1 root root 83880 Sep 22 2020 stty - -rwsr-xr-x 1 root root 79396 Feb 7 2021 su - -rwxr-xr-x 1 root root 34696 Sep 22 2020 sync - -rwxr-xr-x 1 root root 602584 Feb 16 2021 tar - -rwxr-xr-x 1 root root 13860 Sep 27 2020 tempfile - -rwxr-xr-x 1 root root 108520 Sep 22 2020 touch - -rwxr-xr-x 1 root root 34664 Sep 22 2020 true - -rwxr-xr-x 1 root root 17768 Feb 26 2021 ulockmgr_server - -rwsr-xr-x 1 root root 30236 Feb 7 2021 umount - -rwxr-xr-x 1 root root 34664 Sep 22 2020 uname - -rwxr-xr-x 2 root root 2346 Mar 2 2021 uncompress - -rwxr-xr-x 1 root root 153964 Sep 22 2020 vdir - -rwxr-xr-x 1 root root 63024 Feb 7 2021 wdctl - lrwxrwxrwx 1 root root 8 Nov 6 2019 ypdomainname -> hostname - -rwxr-xr-x 1 root root 1984 Mar 2 2021 zcat - -rwxr-xr-x 1 root root 1678 Mar 2 2021 zcmp - -rwxr-xr-x 1 root root 5880 Mar 2 2021 zdiff - -rwxr-xr-x 1 root root 29 Mar 2 2021 zegrep - -rwxr-xr-x 1 root root 29 Mar 2 2021 zfgrep - -rwxr-xr-x 1 root root 2081 Mar 2 2021 zforce - -rwxr-xr-x 1 root root 7585 Mar 2 2021 zgrep - -rwxr-xr-x 1 root root 2206 Mar 2 2021 zless - -rwxr-xr-x 1 root root 1842 Mar 2 2021 zmore - -rwxr-xr-x 1 root root 4553 Mar 2 2021 znew -I: user script /srv/workspace/pbuilder/28914/tmp/hooks/D02_print_environment finished + -rwxr-xr-x 1 root root 1367848 Jun 22 16:25 bash + -rwxr-xr-x 3 root root 38280 Jul 21 2020 bunzip2 + -rwxr-xr-x 3 root root 38280 Jul 21 2020 bzcat + lrwxrwxrwx 1 root root 6 Jul 21 2020 bzcmp -> bzdiff + -rwxr-xr-x 1 root root 2225 Jul 21 2020 bzdiff + lrwxrwxrwx 1 root root 6 Jul 21 2020 bzegrep -> bzgrep + -rwxr-xr-x 1 root root 4877 Sep 5 2019 bzexe + lrwxrwxrwx 1 root root 6 Jul 21 2020 bzfgrep -> bzgrep + -rwxr-xr-x 1 root root 3775 Jul 21 2020 bzgrep + -rwxr-xr-x 3 root root 38280 Jul 21 2020 bzip2 + -rwxr-xr-x 1 root root 17768 Jul 21 2020 bzip2recover + lrwxrwxrwx 1 root root 6 Jul 21 2020 bzless -> bzmore + -rwxr-xr-x 1 root root 1297 Jul 21 2020 bzmore + -rwxr-xr-x 1 root root 38824 Sep 23 2020 cat + -rwxr-xr-x 1 root root 71624 Sep 23 2020 chgrp + -rwxr-xr-x 1 root root 67528 Sep 23 2020 chmod + -rwxr-xr-x 1 root root 75752 Sep 23 2020 chown + -rwxr-xr-x 1 root root 157960 Sep 23 2020 cp + -rwxr-xr-x 1 root root 128724 Dec 11 2020 dash + -rwxr-xr-x 1 root root 124904 Sep 23 2020 date + -rwxr-xr-x 1 root root 92172 Sep 23 2020 dd + -rwxr-xr-x 1 root root 100752 Sep 23 2020 df + -rwxr-xr-x 1 root root 153964 Sep 23 2020 dir + -rwxr-xr-x 1 root root 83644 Feb 8 04:38 dmesg + lrwxrwxrwx 1 root root 8 Nov 8 2019 dnsdomainname -> hostname + lrwxrwxrwx 1 root root 8 Nov 8 2019 domainname -> hostname + -rwxr-xr-x 1 root root 34664 Sep 23 2020 echo + -rwxr-xr-x 1 root root 28 Nov 10 2020 egrep + -rwxr-xr-x 1 root root 34664 Sep 23 2020 false + -rwxr-xr-x 1 root root 28 Nov 10 2020 fgrep + -rwxr-xr-x 1 root root 71928 Feb 8 04:38 findmnt + -rwsr-xr-x 1 root root 30112 Feb 27 06:12 fusermount + -rwxr-xr-x 1 root root 210488 Nov 10 2020 grep + -rwxr-xr-x 2 root root 2346 Mar 3 13:30 gunzip + -rwxr-xr-x 1 root root 6376 Mar 3 13:30 gzexe + -rwxr-xr-x 1 root root 100952 Mar 3 13:30 gzip + -rwxr-xr-x 1 root root 21916 Nov 8 2019 hostname + -rwxr-xr-x 1 root root 83980 Sep 23 2020 ln + -rwxr-xr-x 1 root root 55572 Feb 8 2020 login + -rwxr-xr-x 1 root root 153964 Sep 23 2020 ls + -rwxr-xr-x 1 root root 153124 Feb 8 04:38 lsblk + -rwxr-xr-x 1 root root 96328 Sep 23 2020 mkdir + -rwxr-xr-x 1 root root 79912 Sep 23 2020 mknod + -rwxr-xr-x 1 root root 47048 Sep 23 2020 mktemp + -rwxr-xr-x 1 root root 58920 Feb 8 04:38 more + -rwsr-xr-x 1 root root 50720 Feb 8 04:38 mount + -rwxr-xr-x 1 root root 13856 Feb 8 04:38 mountpoint + -rwxr-xr-x 1 root root 157996 Sep 23 2020 mv + lrwxrwxrwx 1 root root 8 Nov 8 2019 nisdomainname -> hostname + lrwxrwxrwx 1 root root 14 Apr 19 05:38 pidof -> /sbin/killall5 + -rwxr-xr-x 1 root root 38824 Sep 23 2020 pwd + lrwxrwxrwx 1 root root 4 Jun 22 16:25 rbash -> bash + -rwxr-xr-x 1 root root 46984 Sep 23 2020 readlink + -rwxr-xr-x 1 root root 75720 Sep 23 2020 rm + -rwxr-xr-x 1 root root 46984 Sep 23 2020 rmdir + -rwxr-xr-x 1 root root 22292 Sep 28 2020 run-parts + -rwxr-xr-x 1 root root 125036 Dec 23 2018 sed + lrwxrwxrwx 1 root root 4 Jul 25 13:15 sh -> bash + lrwxrwxrwx 1 root root 4 Jul 24 23:25 sh.distrib -> dash + -rwxr-xr-x 1 root root 34696 Sep 23 2020 sleep + -rwxr-xr-x 1 root root 83880 Sep 23 2020 stty + -rwsr-xr-x 1 root root 79396 Feb 8 04:38 su + -rwxr-xr-x 1 root root 34696 Sep 23 2020 sync + -rwxr-xr-x 1 root root 602584 Feb 17 23:55 tar + -rwxr-xr-x 1 root root 13860 Sep 28 2020 tempfile + -rwxr-xr-x 1 root root 108520 Sep 23 2020 touch + -rwxr-xr-x 1 root root 34664 Sep 23 2020 true + -rwxr-xr-x 1 root root 17768 Feb 27 06:12 ulockmgr_server + -rwsr-xr-x 1 root root 30236 Feb 8 04:38 umount + -rwxr-xr-x 1 root root 34664 Sep 23 2020 uname + -rwxr-xr-x 2 root root 2346 Mar 3 13:30 uncompress + -rwxr-xr-x 1 root root 153964 Sep 23 2020 vdir + -rwxr-xr-x 1 root root 63024 Feb 8 04:38 wdctl + lrwxrwxrwx 1 root root 8 Nov 8 2019 ypdomainname -> hostname + -rwxr-xr-x 1 root root 1984 Mar 3 13:30 zcat + -rwxr-xr-x 1 root root 1678 Mar 3 13:30 zcmp + -rwxr-xr-x 1 root root 5880 Mar 3 13:30 zdiff + -rwxr-xr-x 1 root root 29 Mar 3 13:30 zegrep + -rwxr-xr-x 1 root root 29 Mar 3 13:30 zfgrep + -rwxr-xr-x 1 root root 2081 Mar 3 13:30 zforce + -rwxr-xr-x 1 root root 7585 Mar 3 13:30 zgrep + -rwxr-xr-x 1 root root 2206 Mar 3 13:30 zless + -rwxr-xr-x 1 root root 1842 Mar 3 13:30 zmore + -rwxr-xr-x 1 root root 4553 Mar 3 13:30 znew +I: user script /srv/workspace/pbuilder/703/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -387,7 +421,7 @@ Get: 145 http://deb.debian.org/debian bullseye/main i386 libglx0 i386 1.3.2-1 [39.1 kB] Get: 146 http://deb.debian.org/debian bullseye/main i386 libgl1 i386 1.3.2-1 [83.6 kB] Get: 147 http://deb.debian.org/debian bullseye/main i386 xvfb i386 2:1.20.11-1 [3099 kB] -Fetched 108 MB in 1s (96.7 MB/s) +Fetched 108 MB in 8s (13.4 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package bsdextrautils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19675 files and directories currently installed.) @@ -996,9 +1030,41 @@ Building dependency tree... Reading state information... fakeroot is already the newest version (1.25.3-1.1). -0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. +The following additional packages will be installed: + libfile-find-rule-perl libnumber-compare-perl libtext-glob-perl +The following NEW packages will be installed: + libfile-find-rule-perl libnumber-compare-perl libtext-glob-perl usrmerge +0 upgraded, 4 newly installed, 0 to remove and 0 not upgraded. +Need to get 59.5 kB of archives. +After this operation, 157 kB of additional disk space will be used. +Get:1 http://deb.debian.org/debian bullseye/main i386 libnumber-compare-perl all 0.03-1.1 [6956 B] +Get:2 http://deb.debian.org/debian bullseye/main i386 libtext-glob-perl all 0.11-1 [8888 B] +Get:3 http://deb.debian.org/debian bullseye/main i386 libfile-find-rule-perl all 0.34-1 [30.6 kB] +Get:4 http://deb.debian.org/debian bullseye/main i386 usrmerge all 25 [13.0 kB] +debconf: delaying package configuration, since apt-utils is not installed +Fetched 59.5 kB in 0s (323 kB/s) +Selecting previously unselected package libnumber-compare-perl. +(Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 27733 files and directories currently installed.) +Preparing to unpack .../libnumber-compare-perl_0.03-1.1_all.deb ... +Unpacking libnumber-compare-perl (0.03-1.1) ... +Selecting previously unselected package libtext-glob-perl. +Preparing to unpack .../libtext-glob-perl_0.11-1_all.deb ... +Unpacking libtext-glob-perl (0.11-1) ... +Selecting previously unselected package libfile-find-rule-perl. +Preparing to unpack .../libfile-find-rule-perl_0.34-1_all.deb ... +Unpacking libfile-find-rule-perl (0.34-1) ... +Selecting previously unselected package usrmerge. +Preparing to unpack .../archives/usrmerge_25_all.deb ... +Unpacking usrmerge (25) ... +Setting up libtext-glob-perl (0.11-1) ... +Setting up libnumber-compare-perl (0.03-1.1) ... +Setting up libfile-find-rule-perl (0.34-1) ... +Setting up usrmerge (25) ... +The system has been successfully converted. +Processing triggers for man-db (2.9.4-2) ... +Not building database; man-db/auto-update is not 'true'. I: Building the package -I: Running cd /build/cmtk-3.3.1p1+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b +I: Running cd /build/cmtk-3.3.1p1+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b dpkg-buildpackage: info: source package cmtk dpkg-buildpackage: info: source version 3.3.1p1+dfsg-2 dpkg-buildpackage: info: source distribution unstable @@ -1123,7 +1189,7 @@ -- Check for ANSI scope - found -- Check for sstream -- Check for sstream - found --- System is Linux-4.19.0-17-amd64 +-- System is Linux-4.19.0-17-686-pae -- Looking for include file dirent.h -- Looking for include file dirent.h - found -- Looking for include file execinfo.h @@ -1223,7 +1289,7 @@ -- Build files have been written to: /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu make[1]: Leaving directory '/build/cmtk-3.3.1p1+dfsg' dh_auto_build - cd obj-i686-linux-gnu && make -j16 "INSTALL=install --strip-program=true" VERBOSE=1 + cd obj-i686-linux-gnu && make -j7 "INSTALL=install --strip-program=true" VERBOSE=1 make[1]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' /usr/bin/cmake -S/build/cmtk-3.3.1p1+dfsg -B/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/CMakeFiles /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu//CMakeFiles/progress.marks @@ -1233,10 +1299,10 @@ make -f Utilities/mxml/CMakeFiles/cmtkMxml.dir/build.make Utilities/mxml/CMakeFiles/cmtkMxml.dir/depend make -f libs/Numerics/CMakeFiles/cmtkNumerics.dir/build.make libs/Numerics/CMakeFiles/cmtkNumerics.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/Utilities/mxml /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/mxml /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/mxml/CMakeFiles/cmtkMxml.dir/DependInfo.cmake --color= -make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/Utilities/mxml /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/mxml /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/mxml/CMakeFiles/cmtkMxml.dir/DependInfo.cmake --color= +make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/libs/Numerics /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Numerics /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Numerics/CMakeFiles/cmtkNumerics.dir/DependInfo.cmake --color= Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/mxml/CMakeFiles/cmtkMxml.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/mxml/CMakeFiles/cmtkMxml.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/mxml/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/mxml/CMakeFiles/cmtkMxml.dir/depend.internal". @@ -1251,296 +1317,296 @@ Scanning dependencies of target NrrdIO make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/build.make Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/build +[ 0%] Building C object Utilities/mxml/CMakeFiles/cmtkMxml.dir/mxml-attr.c.o make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +[ 0%] Building C object Utilities/mxml/CMakeFiles/cmtkMxml.dir/mxml-index.c.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/mxml && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkMxml_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/mxml -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/cmtkMxml.dir/mxml-attr.c.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/mxml/mxml-attr.c +[ 1%] Building C object Utilities/mxml/CMakeFiles/cmtkMxml.dir/mxml-entity.c.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/mxml && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkMxml_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/mxml -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/cmtkMxml.dir/mxml-index.c.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/mxml/mxml-index.c Scanning dependencies of target cmtkNumerics -[ 0%] Building C object Utilities/mxml/CMakeFiles/cmtkMxml.dir/mxml-get.c.o make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make -f libs/Numerics/CMakeFiles/cmtkNumerics.dir/build.make libs/Numerics/CMakeFiles/cmtkNumerics.dir/build -[ 0%] Building C object Utilities/mxml/CMakeFiles/cmtkMxml.dir/mxml-set.c.o -[ 0%] Building C object Utilities/mxml/CMakeFiles/cmtkMxml.dir/mxml-node.c.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/mxml && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkMxml_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/mxml -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/cmtkMxml.dir/mxml-get.c.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/mxml/mxml-get.c -[ 1%] Building C object Utilities/mxml/CMakeFiles/cmtkMxml.dir/mxml-entity.c.o -[ 1%] Building C object Utilities/mxml/CMakeFiles/cmtkMxml.dir/mxml-attr.c.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/mxml && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkMxml_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/mxml -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/cmtkMxml.dir/mxml-set.c.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/mxml/mxml-set.c -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/mxml && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkMxml_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/mxml -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/cmtkMxml.dir/mxml-node.c.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/mxml/mxml-node.c -[ 1%] Building C object Utilities/mxml/CMakeFiles/cmtkMxml.dir/mxml-index.c.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/mxml && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkMxml_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/mxml -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/cmtkMxml.dir/mxml-entity.c.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/mxml/mxml-entity.c +make -f libs/Numerics/CMakeFiles/cmtkNumerics.dir/build.make libs/Numerics/CMakeFiles/cmtkNumerics.dir/build [ 1%] Building C object Utilities/mxml/CMakeFiles/cmtkMxml.dir/mxml-private.c.o -make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/mxml && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkMxml_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/mxml -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/cmtkMxml.dir/mxml-attr.c.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/mxml/mxml-attr.c -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/mxml && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkMxml_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/mxml -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/cmtkMxml.dir/mxml-index.c.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/mxml/mxml-index.c -[ 2%] Building C object Utilities/mxml/CMakeFiles/cmtkMxml.dir/mxml-file.c.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/mxml && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkMxml_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/mxml -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/cmtkMxml.dir/mxml-private.c.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/mxml/mxml-private.c -[ 2%] Building C object Utilities/mxml/CMakeFiles/cmtkMxml.dir/mxml-search.c.o -[ 2%] Building C object Utilities/mxml/CMakeFiles/cmtkMxml.dir/mxml-string.c.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/mxml && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkMxml_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/mxml -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/cmtkMxml.dir/mxml-file.c.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/mxml/mxml-file.c -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/mxml && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkMxml_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/mxml -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/cmtkMxml.dir/mxml-search.c.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/mxml/mxml-search.c -[ 2%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/comment.o +[ 1%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/comment.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/comment.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/comment.c -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/mxml && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkMxml_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/mxml -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/cmtkMxml.dir/mxml-string.c.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/mxml/mxml-string.c +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/mxml && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkMxml_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/mxml -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/cmtkMxml.dir/mxml-private.c.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/mxml/mxml-private.c +make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +[ 1%] Building C object Utilities/mxml/CMakeFiles/cmtkMxml.dir/mxml-get.c.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/mxml && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkMxml_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/mxml -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/cmtkMxml.dir/mxml-get.c.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/mxml/mxml-get.c +[ 2%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/ap.cxx.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/ap.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Numerics/ap.cxx +[ 2%] Building C object Utilities/mxml/CMakeFiles/cmtkMxml.dir/mxml-set.c.o [ 2%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/enumsNrrd.o -[ 2%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/754.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/enumsNrrd.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/enumsNrrd.c -[ 2%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/mop.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/754.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/754.c -[ 2%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/string.o +[ 2%] Building C object Utilities/mxml/CMakeFiles/cmtkMxml.dir/mxml-node.c.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/mxml && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkMxml_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/mxml -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/cmtkMxml.dir/mxml-node.c.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/mxml/mxml-node.c +[ 3%] Building C object Utilities/mxml/CMakeFiles/cmtkMxml.dir/mxml-file.c.o +[ 3%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/bdsvd.cxx.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/bdsvd.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Numerics/bdsvd.cxx +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/mxml && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkMxml_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/mxml -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/cmtkMxml.dir/mxml-set.c.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/mxml/mxml-set.c +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/mxml && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkMxml_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/mxml -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/cmtkMxml.dir/mxml-file.c.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/mxml/mxml-file.c +[ 3%] Building C object Utilities/mxml/CMakeFiles/cmtkMxml.dir/mxml-search.c.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/mxml && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkMxml_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/mxml -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/cmtkMxml.dir/mxml-search.c.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/mxml/mxml-search.c +[ 3%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/mop.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/mop.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/mop.c +[ 3%] Building C object Utilities/mxml/CMakeFiles/cmtkMxml.dir/mxml-string.c.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/mxml && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkMxml_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/mxml -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/cmtkMxml.dir/mxml-string.c.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/mxml/mxml-string.c +[ 3%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/string.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/string.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/string.c -[ 3%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/ap.cxx.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/ap.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Numerics/ap.cxx -[ 3%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/parseAir.o +[ 3%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/754.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/754.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/754.c [ 4%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/defaultsNrrd.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/parseAir.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/parseAir.c cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/defaultsNrrd.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/defaultsNrrd.c +[ 4%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/parseAir.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/parseAir.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/parseAir.c [ 4%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/dio.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/dio.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/dio.c [ 4%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/format.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/format.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/format.c -[ 4%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/bdsvd.cxx.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/bdsvd.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Numerics/bdsvd.cxx [ 4%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/parseNrrd.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/parseNrrd.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/parseNrrd.c -[ 4%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/bidiagonal.cxx.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/bidiagonal.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Numerics/bidiagonal.cxx [ 5%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/formatEPS.o -[ 5%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/blas.cxx.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/blas.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Numerics/blas.cxx cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/formatEPS.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/formatEPS.c [ 5%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/encoding.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/encoding.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/encoding.c -[ 5%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/encodingAscii.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/encodingAscii.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/encodingAscii.c [ 5%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/formatNRRD.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/formatNRRD.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/formatNRRD.c +[ 5%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/encodingAscii.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/encodingAscii.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/encodingAscii.c [ 5%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/formatPNG.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/formatPNG.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/formatPNG.c [ 6%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/encodingBzip2.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/encodingBzip2.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/encodingBzip2.c +[ 6%] Linking C shared library ../../bin/libcmtkMxml.so [ 6%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/formatPNM.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/mxml && /usr/bin/cmake -E cmake_link_script CMakeFiles/cmtkMxml.dir/link.txt --verbose=1 cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/formatPNM.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/formatPNM.c +/usr/bin/cc -fPIC -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -shared -Wl,-soname,libcmtkMxml.so -o ../../bin/libcmtkMxml.so CMakeFiles/cmtkMxml.dir/mxml-attr.c.o CMakeFiles/cmtkMxml.dir/mxml-entity.c.o CMakeFiles/cmtkMxml.dir/mxml-index.c.o CMakeFiles/cmtkMxml.dir/mxml-private.c.o CMakeFiles/cmtkMxml.dir/mxml-get.c.o CMakeFiles/cmtkMxml.dir/mxml-set.c.o CMakeFiles/cmtkMxml.dir/mxml-file.c.o CMakeFiles/cmtkMxml.dir/mxml-node.c.o CMakeFiles/cmtkMxml.dir/mxml-search.c.o CMakeFiles/cmtkMxml.dir/mxml-string.c.o [ 6%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/accessors.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/accessors.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/accessors.c [ 6%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/encodingGzip.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/encodingGzip.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/encodingGzip.c [ 6%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/formatText.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/formatText.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/formatText.c +make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +[ 6%] Built target cmtkMxml +make -f libs/System/CMakeFiles/cmtkSystem.dir/build.make libs/System/CMakeFiles/cmtkSystem.dir/depend [ 7%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/array.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/array.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/array.c +make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/libs/System /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/System /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/System/CMakeFiles/cmtkSystem.dir/DependInfo.cmake --color= +Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/System/CMakeFiles/cmtkSystem.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/System/CMakeFiles/cmtkSystem.dir/depend.internal". +Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/System/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/System/CMakeFiles/cmtkSystem.dir/depend.internal". +[ 7%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/bidiagonal.cxx.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/bidiagonal.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Numerics/bidiagonal.cxx [ 7%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/encodingHex.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/encodingHex.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/encodingHex.c [ 7%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/formatVTK.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/formatVTK.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/formatVTK.c [ 7%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/read.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/read.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/read.c +Scanning dependencies of target cmtkSystem +make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +make -f libs/System/CMakeFiles/cmtkSystem.dir/build.make libs/System/CMakeFiles/cmtkSystem.dir/build +make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +[ 7%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLine.cxx.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCommandLine.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.cxx [ 7%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/arraysNrrd.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/arraysNrrd.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/arraysNrrd.c [ 8%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/encodingRaw.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/encodingRaw.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/encodingRaw.c [ 8%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/gzio.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/gzio.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/gzio.c -[ 8%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/cholesky.cxx.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/cholesky.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Numerics/cholesky.cxx [ 8%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/reorder.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/reorder.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/reorder.c -[ 8%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/axis.o [ 8%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/write.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/axis.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/axis.c cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/write.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/write.c +[ 8%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/axis.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/axis.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/axis.c +[ 8%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/blas.cxx.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/blas.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Numerics/blas.cxx [ 9%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/endianAir.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/endianAir.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/endianAir.c +In file included from /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.cxx:33: +/build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] + 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); + | ^~~~~ [ 9%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/keyvalue.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/keyvalue.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/keyvalue.c [ 9%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/biffbiff.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/biffbiff.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/biffbiff.c +/build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.cxx:123:58: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] + 123 | CommandLine::Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ) + | ^~~~~ [ 9%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/biffmsg.o +[ 9%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/cholesky.cxx.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/cholesky.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Numerics/cholesky.cxx cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/biffmsg.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/biffmsg.c -[ 10%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/det.cxx.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/det.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Numerics/det.cxx -[ 10%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/endianNrrd.o -[ 10%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/gammaf.cxx.o +[ 9%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/endianNrrd.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/endianNrrd.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/endianNrrd.c -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/gammaf.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Numerics/gammaf.cxx -[ 11%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/methodsNrrd.o +[ 10%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/methodsNrrd.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/methodsNrrd.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/methodsNrrd.c -[ 11%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/sane.o +[ 10%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/sane.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/sane.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/sane.c -[ 11%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/enum.o +[ 10%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/enum.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/enum.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/enum.c -[ 11%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/hessenberg.cxx.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/hessenberg.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Numerics/hessenberg.cxx -[ 11%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/miscAir.o +[ 10%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/miscAir.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/miscAir.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/miscAir.c -[ 11%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/simple.o +[ 10%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/simple.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/simple.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/simple.c -[ 11%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/hsschur.cxx.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/hsschur.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Numerics/hsschur.cxx -[ 11%] Linking C shared library ../../bin/libcmtkMxml.so -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/mxml && /usr/bin/cmake -E cmake_link_script CMakeFiles/cmtkMxml.dir/link.txt --verbose=1 -/usr/bin/cc -fPIC -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -shared -Wl,-soname,libcmtkMxml.so -o ../../bin/libcmtkMxml.so CMakeFiles/cmtkMxml.dir/mxml-attr.c.o CMakeFiles/cmtkMxml.dir/mxml-entity.c.o CMakeFiles/cmtkMxml.dir/mxml-index.c.o CMakeFiles/cmtkMxml.dir/mxml-private.c.o CMakeFiles/cmtkMxml.dir/mxml-get.c.o CMakeFiles/cmtkMxml.dir/mxml-set.c.o CMakeFiles/cmtkMxml.dir/mxml-file.c.o CMakeFiles/cmtkMxml.dir/mxml-node.c.o CMakeFiles/cmtkMxml.dir/mxml-search.c.o CMakeFiles/cmtkMxml.dir/mxml-string.c.o -[ 11%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/ibetaf.cxx.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/ibetaf.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Numerics/ibetaf.cxx -[ 12%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/lbfgsb.cxx.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/lbfgsb.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Numerics/lbfgsb.cxx -[ 12%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/lu.cxx.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/lu.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Numerics/lu.cxx -[ 12%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/lq.cxx.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/lq.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Numerics/lq.cxx -make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[ 12%] Built target cmtkMxml -[ 12%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/nsevd.cxx.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/nsevd.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Numerics/nsevd.cxx -[ 12%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/normaldistr.cxx.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/normaldistr.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Numerics/normaldistr.cxx -[ 13%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/qr.cxx.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/qr.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Numerics/qr.cxx -make -f libs/System/CMakeFiles/cmtkSystem.dir/build.make libs/System/CMakeFiles/cmtkSystem.dir/depend -make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/libs/System /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/System /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/System/CMakeFiles/cmtkSystem.dir/DependInfo.cmake --color= -[ 13%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/reflections.cxx.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/reflections.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Numerics/reflections.cxx -[ 13%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/rotations.cxx.o -Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/System/CMakeFiles/cmtkSystem.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/System/CMakeFiles/cmtkSystem.dir/depend.internal". -Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/System/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/System/CMakeFiles/cmtkSystem.dir/depend.internal". -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/rotations.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Numerics/rotations.cxx -[ 13%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/sblas.cxx.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/sblas.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Numerics/sblas.cxx -Scanning dependencies of target cmtkSystem -make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make -f libs/System/CMakeFiles/cmtkSystem.dir/build.make libs/System/CMakeFiles/cmtkSystem.dir/build -make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[ 13%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLine.cxx.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCommandLine.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.cxx -[ 13%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/sevd.cxx.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/sevd.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Numerics/sevd.cxx -[ 13%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/spddet.cxx.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/spddet.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Numerics/spddet.cxx -[ 14%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/studenttdistr.cxx.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/studenttdistr.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Numerics/studenttdistr.cxx -[ 14%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/studentttests.cxx.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/studentttests.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Numerics/studentttests.cxx -[ 14%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/svd.cxx.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/svd.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Numerics/svd.cxx -[ 15%] Linking C shared library ../../bin/libNrrdIO.so -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO && /usr/bin/cmake -E cmake_link_script CMakeFiles/NrrdIO.dir/link.txt --verbose=1 -/usr/bin/cc -fPIC -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -shared -Wl,-soname,libNrrdIO.so -o ../../bin/libNrrdIO.so CMakeFiles/NrrdIO.dir/comment.o CMakeFiles/NrrdIO.dir/enumsNrrd.o CMakeFiles/NrrdIO.dir/mop.o CMakeFiles/NrrdIO.dir/string.o CMakeFiles/NrrdIO.dir/754.o CMakeFiles/NrrdIO.dir/defaultsNrrd.o CMakeFiles/NrrdIO.dir/parseAir.o CMakeFiles/NrrdIO.dir/dio.o CMakeFiles/NrrdIO.dir/format.o CMakeFiles/NrrdIO.dir/parseNrrd.o CMakeFiles/NrrdIO.dir/formatEPS.o CMakeFiles/NrrdIO.dir/encoding.o CMakeFiles/NrrdIO.dir/formatNRRD.o CMakeFiles/NrrdIO.dir/encodingAscii.o CMakeFiles/NrrdIO.dir/formatPNG.o CMakeFiles/NrrdIO.dir/encodingBzip2.o CMakeFiles/NrrdIO.dir/formatPNM.o CMakeFiles/NrrdIO.dir/accessors.o CMakeFiles/NrrdIO.dir/encodingGzip.o CMakeFiles/NrrdIO.dir/formatText.o CMakeFiles/NrrdIO.dir/array.o CMakeFiles/NrrdIO.dir/encodingHex.o CMakeFiles/NrrdIO.dir/formatVTK.o CMakeFiles/NrrdIO.dir/read.o CMakeFiles/NrrdIO.dir/arraysNrrd.o CMakeFiles/NrrdIO.dir/encodingRaw.o CMakeFiles/NrrdIO.dir/gzio.o CMakeFiles/NrrdIO.dir/reorder.o CMakeFiles/NrrdIO.dir/write.o CMakeFiles/NrrdIO.dir/axis.o CMakeFiles/NrrdIO.dir/endianAir.o CMakeFiles/NrrdIO.dir/keyvalue.o CMakeFiles/NrrdIO.dir/biffbiff.o CMakeFiles/NrrdIO.dir/biffmsg.o CMakeFiles/NrrdIO.dir/endianNrrd.o CMakeFiles/NrrdIO.dir/methodsNrrd.o CMakeFiles/NrrdIO.dir/sane.o CMakeFiles/NrrdIO.dir/enum.o CMakeFiles/NrrdIO.dir/miscAir.o CMakeFiles/NrrdIO.dir/simple.o -lz -[ 15%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/tdevd.cxx.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/tdevd.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Numerics/tdevd.cxx -make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[ 15%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/tridiagonal.cxx.o -[ 15%] Built target NrrdIO -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/tridiagonal.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Numerics/tridiagonal.cxx -[ 16%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/mersenne.cxx.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/mersenne.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Numerics/mersenne.cxx -[ 16%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineCallback.cxx.o +[ 10%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineCallback.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCommandLineCallback.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineCallback.cxx -[ 17%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineItem.cxx.o +[ 11%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/det.cxx.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/det.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Numerics/det.cxx +[ 12%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineItem.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCommandLineItem.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineItem.cxx -[ 17%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineKeyToAction.cxx.o +[ 12%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/gammaf.cxx.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/gammaf.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Numerics/gammaf.cxx +[ 12%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/hessenberg.cxx.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/hessenberg.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Numerics/hessenberg.cxx +[ 13%] Linking C shared library ../../bin/libNrrdIO.so +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO && /usr/bin/cmake -E cmake_link_script CMakeFiles/NrrdIO.dir/link.txt --verbose=1 +/usr/bin/cc -fPIC -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -shared -Wl,-soname,libNrrdIO.so -o ../../bin/libNrrdIO.so CMakeFiles/NrrdIO.dir/comment.o CMakeFiles/NrrdIO.dir/enumsNrrd.o CMakeFiles/NrrdIO.dir/mop.o CMakeFiles/NrrdIO.dir/string.o CMakeFiles/NrrdIO.dir/754.o CMakeFiles/NrrdIO.dir/defaultsNrrd.o CMakeFiles/NrrdIO.dir/parseAir.o CMakeFiles/NrrdIO.dir/dio.o CMakeFiles/NrrdIO.dir/format.o CMakeFiles/NrrdIO.dir/parseNrrd.o CMakeFiles/NrrdIO.dir/formatEPS.o CMakeFiles/NrrdIO.dir/encoding.o CMakeFiles/NrrdIO.dir/formatNRRD.o CMakeFiles/NrrdIO.dir/encodingAscii.o CMakeFiles/NrrdIO.dir/formatPNG.o CMakeFiles/NrrdIO.dir/encodingBzip2.o CMakeFiles/NrrdIO.dir/formatPNM.o CMakeFiles/NrrdIO.dir/accessors.o CMakeFiles/NrrdIO.dir/encodingGzip.o CMakeFiles/NrrdIO.dir/formatText.o CMakeFiles/NrrdIO.dir/array.o CMakeFiles/NrrdIO.dir/encodingHex.o CMakeFiles/NrrdIO.dir/formatVTK.o CMakeFiles/NrrdIO.dir/read.o CMakeFiles/NrrdIO.dir/arraysNrrd.o CMakeFiles/NrrdIO.dir/encodingRaw.o CMakeFiles/NrrdIO.dir/gzio.o CMakeFiles/NrrdIO.dir/reorder.o CMakeFiles/NrrdIO.dir/write.o CMakeFiles/NrrdIO.dir/axis.o CMakeFiles/NrrdIO.dir/endianAir.o CMakeFiles/NrrdIO.dir/keyvalue.o CMakeFiles/NrrdIO.dir/biffbiff.o CMakeFiles/NrrdIO.dir/biffmsg.o CMakeFiles/NrrdIO.dir/endianNrrd.o CMakeFiles/NrrdIO.dir/methodsNrrd.o CMakeFiles/NrrdIO.dir/sane.o CMakeFiles/NrrdIO.dir/enum.o CMakeFiles/NrrdIO.dir/miscAir.o CMakeFiles/NrrdIO.dir/simple.o -lz +[ 13%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/hsschur.cxx.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/hsschur.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Numerics/hsschur.cxx +[ 13%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineKeyToAction.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCommandLineKeyToAction.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineKeyToAction.cxx -[ 17%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineKeyToActionEnum.cxx.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCommandLineKeyToActionEnum.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineKeyToActionEnum.cxx -In file included from /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.cxx:33: +In file included from /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineCallback.cxx:33: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ -[ 17%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineKeyToActionSingle.cxx.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCommandLineKeyToActionSingle.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineKeyToActionSingle.cxx -/build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.cxx:123:58: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] - 123 | CommandLine::Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ) - | ^~~~~ -[ 17%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineNonOptionParameter.cxx.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCommandLineNonOptionParameter.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineNonOptionParameter.cxx -[ 18%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineNonOptionParameterVector.cxx.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCommandLineNonOptionParameterVector.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineNonOptionParameterVector.cxx -[ 18%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineHelp.cxx.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCommandLineHelp.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineHelp.cxx -[ 18%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineMan.cxx.o -In file included from /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineCallback.cxx:33: +In file included from /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineItem.cxx:35: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCommandLineMan.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineMan.cxx +make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +[ 13%] Built target NrrdIO +[ 13%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/ibetaf.cxx.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/ibetaf.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Numerics/ibetaf.cxx +[ 14%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/lbfgsb.cxx.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/lbfgsb.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Numerics/lbfgsb.cxx In file included from /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineKeyToAction.cxx:33: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ -[ 18%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineXML.cxx.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCommandLineXML.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineXML.cxx -/build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineMan.cxx:61:45: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] - 61 | StdOut << ".TH " << cmd << " \"1\" \"" << __DATE__ << "\" \"CMTK " << ppit->second << "\" \"The Computational Morphometry Toolkit\"\n"; - | ^~~~~~~~ -[ 18%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineWiki.cxx.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCommandLineWiki.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineWiki.cxx -In file included from /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineItem.cxx:35: +[ 14%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineKeyToActionEnum.cxx.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCommandLineKeyToActionEnum.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineKeyToActionEnum.cxx +[ 14%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/lq.cxx.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/lq.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Numerics/lq.cxx +[ 14%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineKeyToActionSingle.cxx.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCommandLineKeyToActionSingle.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineKeyToActionSingle.cxx +In file included from /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineKeyToActionEnum.cxx:33: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ +[ 14%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineNonOptionParameter.cxx.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCommandLineNonOptionParameter.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineNonOptionParameter.cxx +[ 15%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineNonOptionParameterVector.cxx.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCommandLineNonOptionParameterVector.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineNonOptionParameterVector.cxx +[ 15%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/lu.cxx.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/lu.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Numerics/lu.cxx In file included from /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineKeyToActionSingle.cxx:33: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ -In file included from /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineKeyToActionEnum.cxx:33: +[ 15%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/normaldistr.cxx.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/normaldistr.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Numerics/normaldistr.cxx +In file included from /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineNonOptionParameterVector.cxx:31: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ -[ 19%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCompressedStream.cxx.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCompressedStream.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCompressedStream.cxx In file included from /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineNonOptionParameter.cxx:31: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ -In file included from /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineNonOptionParameterVector.cxx:31: -/build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] - 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); - | ^~~~~ +[ 16%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/qr.cxx.o +[ 16%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/nsevd.cxx.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/nsevd.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Numerics/nsevd.cxx +[ 16%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineHelp.cxx.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCommandLineHelp.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineHelp.cxx +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/qr.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Numerics/qr.cxx +[ 16%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineMan.cxx.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCommandLineMan.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineMan.cxx +/build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineMan.cxx:61:45: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] + 61 | StdOut << ".TH " << cmd << " \"1\" \"" << __DATE__ << "\" \"CMTK " << ppit->second << "\" \"The Computational Morphometry Toolkit\"\n"; + | ^~~~~~~~ In file included from /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineHelp.cxx:34: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ +[ 16%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineXML.cxx.o +[ 16%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/reflections.cxx.o +[ 16%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineWiki.cxx.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/reflections.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Numerics/reflections.cxx +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCommandLineXML.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineXML.cxx +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCommandLineWiki.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineWiki.cxx In file included from /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineMan.cxx:34: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ -[ 19%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamFile.cxx.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamFile.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCompressedStreamFile.cxx In file included from /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineXML.cxx:34: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ -[ 19%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamPipe.cxx.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamPipe.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCompressedStreamPipe.cxx In file included from /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineWiki.cxx:34: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ -[ 19%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamReaderBase.cxx.o +[ 16%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/rotations.cxx.o +[ 16%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/sblas.cxx.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/rotations.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Numerics/rotations.cxx +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/sblas.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Numerics/sblas.cxx +[ 16%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamFile.cxx.o +[ 17%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCompressedStream.cxx.o +[ 17%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamPipe.cxx.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamFile.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCompressedStreamFile.cxx +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCompressedStream.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCompressedStream.cxx +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamPipe.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCompressedStreamPipe.cxx +[ 17%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/sevd.cxx.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/sevd.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Numerics/sevd.cxx +[ 17%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamReaderBase.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamReaderBase.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCompressedStreamReaderBase.cxx -[ 19%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamZlib.cxx.o +[ 17%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamZlib.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamZlib.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCompressedStreamZlib.cxx -[ 19%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkConsole.cxx.o +[ 17%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/spddet.cxx.o +[ 17%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkConsole.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkConsole.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkConsole.cxx -[ 20%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkFileUtils.cxx.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/spddet.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Numerics/spddet.cxx +[ 18%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/studenttdistr.cxx.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/studenttdistr.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Numerics/studenttdistr.cxx +[ 19%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkFileUtils.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkFileUtils.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkFileUtils.cxx -[ 20%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkMemory.cxx.o +[ 19%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkMemory.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkMemory.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkMemory.cxx -[ 20%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkMountPoints.cxx.o +[ 19%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/studentttests.cxx.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/studentttests.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Numerics/studentttests.cxx +[ 19%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/svd.cxx.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/svd.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Numerics/svd.cxx +[ 19%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkMountPoints.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkMountPoints.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkMountPoints.cxx -[ 20%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkProgress.cxx.o +[ 19%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkProgress.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkProgress.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkProgress.cxx -[ 20%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkProgressConsole.cxx.o +[ 19%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/tdevd.cxx.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/tdevd.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Numerics/tdevd.cxx +[ 19%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkProgressConsole.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkProgressConsole.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkProgressConsole.cxx -[ 21%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkRegressionTracker.cxx.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkRegressionTracker.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkRegressionTracker.cxx -[ 21%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkStackBacktrace.cxx.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkStackBacktrace.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkStackBacktrace.cxx -[ 21%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkThreads.cxx.o -[ 21%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkStrUtility.cxx.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkThreads.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkThreads.cxx -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkStrUtility.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkStrUtility.cxx /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkFileUtils.cxx: In function 'std::string cmtk::FileUtils::GetAbsolutePath(const string&)': /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkFileUtils.cxx:147:11: warning: ignoring return value of 'char* getcwd(char*, size_t)' declared with attribute 'warn_unused_result' [-Wunused-result] 147 | getcwd( absPath, PATH_MAX ); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~ +[ 19%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/tridiagonal.cxx.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/tridiagonal.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Numerics/tridiagonal.cxx +[ 20%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkRegressionTracker.cxx.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkRegressionTracker.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkRegressionTracker.cxx +[ 20%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkStackBacktrace.cxx.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkStackBacktrace.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkStackBacktrace.cxx +[ 21%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/mersenne.cxx.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/mersenne.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Numerics/mersenne.cxx +[ 21%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkStrUtility.cxx.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkStrUtility.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkStrUtility.cxx +[ 21%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkThreads.cxx.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkThreads.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkThreads.cxx [ 21%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkThreadPoolThreads.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkThreadPoolThreads.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkThreadPoolThreads.cxx [ 22%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkThreadSemaphore.cxx.o @@ -1552,12 +1618,12 @@ [ 22%] Linking CXX shared library ../../bin/libcmtkNumerics.so cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Numerics && /usr/bin/cmake -E cmake_link_script CMakeFiles/cmtkNumerics.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -shared -Wl,-soname,libcmtkNumerics.so -o ../../bin/libcmtkNumerics.so CMakeFiles/cmtkNumerics.dir/ap.cxx.o CMakeFiles/cmtkNumerics.dir/bdsvd.cxx.o CMakeFiles/cmtkNumerics.dir/bidiagonal.cxx.o CMakeFiles/cmtkNumerics.dir/blas.cxx.o CMakeFiles/cmtkNumerics.dir/cholesky.cxx.o CMakeFiles/cmtkNumerics.dir/det.cxx.o CMakeFiles/cmtkNumerics.dir/gammaf.cxx.o CMakeFiles/cmtkNumerics.dir/hessenberg.cxx.o CMakeFiles/cmtkNumerics.dir/hsschur.cxx.o CMakeFiles/cmtkNumerics.dir/ibetaf.cxx.o CMakeFiles/cmtkNumerics.dir/lbfgsb.cxx.o CMakeFiles/cmtkNumerics.dir/lq.cxx.o CMakeFiles/cmtkNumerics.dir/lu.cxx.o CMakeFiles/cmtkNumerics.dir/normaldistr.cxx.o CMakeFiles/cmtkNumerics.dir/nsevd.cxx.o CMakeFiles/cmtkNumerics.dir/qr.cxx.o CMakeFiles/cmtkNumerics.dir/reflections.cxx.o CMakeFiles/cmtkNumerics.dir/rotations.cxx.o CMakeFiles/cmtkNumerics.dir/sblas.cxx.o CMakeFiles/cmtkNumerics.dir/sevd.cxx.o CMakeFiles/cmtkNumerics.dir/spddet.cxx.o CMakeFiles/cmtkNumerics.dir/studenttdistr.cxx.o CMakeFiles/cmtkNumerics.dir/studentttests.cxx.o CMakeFiles/cmtkNumerics.dir/svd.cxx.o CMakeFiles/cmtkNumerics.dir/tdevd.cxx.o CMakeFiles/cmtkNumerics.dir/tridiagonal.cxx.o CMakeFiles/cmtkNumerics.dir/mersenne.cxx.o -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,::::::::::::: -make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[ 22%] Built target cmtkNumerics [ 22%] Linking CXX shared library ../../bin/libcmtkSystem.so cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/System && /usr/bin/cmake -E cmake_link_script CMakeFiles/cmtkSystem.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -shared -Wl,-soname,libcmtkSystem.so -o ../../bin/libcmtkSystem.so CMakeFiles/cmtkSystem.dir/cmtkCommandLine.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCommandLineCallback.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCommandLineItem.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCommandLineKeyToAction.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCommandLineKeyToActionEnum.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCommandLineKeyToActionSingle.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCommandLineNonOptionParameter.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCommandLineNonOptionParameterVector.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCommandLineHelp.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCommandLineMan.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCommandLineXML.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCommandLineWiki.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCompressedStream.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamFile.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamPipe.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamReaderBase.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamZlib.cxx.o CMakeFiles/cmtkSystem.dir/cmtkConsole.cxx.o CMakeFiles/cmtkSystem.dir/cmtkFileUtils.cxx.o CMakeFiles/cmtkSystem.dir/cmtkMemory.cxx.o CMakeFiles/cmtkSystem.dir/cmtkMountPoints.cxx.o CMakeFiles/cmtkSystem.dir/cmtkProgress.cxx.o CMakeFiles/cmtkSystem.dir/cmtkProgressConsole.cxx.o CMakeFiles/cmtkSystem.dir/cmtkRegressionTracker.cxx.o CMakeFiles/cmtkSystem.dir/cmtkStackBacktrace.cxx.o CMakeFiles/cmtkSystem.dir/cmtkStrUtility.cxx.o CMakeFiles/cmtkSystem.dir/cmtkThreads.cxx.o CMakeFiles/cmtkSystem.dir/cmtkThreadPoolThreads.cxx.o CMakeFiles/cmtkSystem.dir/cmtkThreadSemaphore.cxx.o CMakeFiles/cmtkSystem.dir/cmtkTimers.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamBZip2.cxx.o -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: -lbz2 -lz ../../bin/libcmtkMxml.so -lfftw3_omp -lfftw3 -lfftw3_threads make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +[ 22%] Built target cmtkNumerics +make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 22%] Built target cmtkSystem make -f libs/Base/CMakeFiles/cmtkBase.dir/build.make libs/Base/CMakeFiles/cmtkBase.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' @@ -1569,34 +1635,34 @@ make -f libs/Base/CMakeFiles/cmtkBase.dir/build.make libs/Base/CMakeFiles/cmtkBase.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 22%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkActiveDeformationModel.cxx.o +[ 22%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkAffineXformUniformVolume.cxx.o +[ 22%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkActiveShapeModel.cxx.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkActiveDeformationModel.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkActiveDeformationModel.cxx [ 23%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkAffineXform.cxx.o -[ 23%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkActiveShapeModel.cxx.o -[ 23%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkAffineXformUniformVolume.cxx.o [ 23%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkAnatomicalOrientation.cxx.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkActiveDeformationModel.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkActiveDeformationModel.cxx [ 23%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkAnatomicalOrientationBase.cxx.o +[ 23%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkAnatomicalOrientationPermutationMatrix.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkActiveShapeModel.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkActiveShapeModel.cxx -[ 24%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkDataGridLocalCorrelation.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkAffineXform.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkAffineXform.cxx cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkAffineXformUniformVolume.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkAffineXformUniformVolume.cxx cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkAnatomicalOrientation.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkAnatomicalOrientation.cxx -[ 24%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkAnatomicalOrientationPermutationMatrix.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkAnatomicalOrientationBase.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkAnatomicalOrientationBase.cxx -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkDataGridLocalCorrelation.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkDataGridLocalCorrelation.cxx -[ 24%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkBitVector.cxx.o -[ 25%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkCompatibilityMatrix4x4.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkAnatomicalOrientationPermutationMatrix.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkAnatomicalOrientationPermutationMatrix.cxx -[ 25%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkDataGrid.cxx.o -[ 25%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkDataGridConnectedComponents.cxx.o -[ 25%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkDataGridFilter.cxx.o +[ 23%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkBitVector.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkBitVector.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkBitVector.cxx -[ 25%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkDataGrid_Crop.cxx.o +[ 24%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkCompatibilityMatrix4x4.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkCompatibilityMatrix4x4.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkCompatibilityMatrix4x4.cxx -[ 25%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkDataGridMorphologicalOperators.cxx.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkDataGrid.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkDataGrid.cxx +[ 24%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkDataGrid_Crop.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkDataGrid_Crop.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkDataGrid_Crop.cxx +[ 24%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkDataGrid.cxx.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkDataGrid.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkDataGrid.cxx +[ 24%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkDataGridFilter.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkDataGridFilter.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkDataGridFilter.cxx +[ 24%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkDataGridConnectedComponents.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkDataGridConnectedComponents.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkDataGridConnectedComponents.cxx +[ 25%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkDataGridLocalCorrelation.cxx.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkDataGridLocalCorrelation.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkDataGridLocalCorrelation.cxx +[ 25%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkDataGridMorphologicalOperators.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkDataGridMorphologicalOperators.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkDataGridMorphologicalOperators.cxx [ 25%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkDeformationField.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkDeformationField.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkDeformationField.cxx @@ -1612,42 +1678,37 @@ cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkFitAffineToWarpXform.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkFitAffineToWarpXform.cxx [ 26%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkFitAffineToXformList.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkFitAffineToXformList.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkFitAffineToXformList.cxx -[ 27%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkFitPolynomialToLandmarks.cxx.o -[ 27%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkFitSplineWarpToDeformationField.cxx.o -[ 27%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkFitRigidToLandmarks.cxx.o +[ 26%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkFitPolynomialToLandmarks.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkFitPolynomialToLandmarks.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkFitPolynomialToLandmarks.cxx +[ 26%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkFitSplineWarpToDeformationField.cxx.o +[ 27%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkFitRigidToLandmarks.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkFitRigidToLandmarks.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkFitRigidToLandmarks.cxx cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkFitSplineWarpToDeformationField.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkFitSplineWarpToDeformationField.cxx [ 27%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkFitSplineWarpToLandmarks.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkFitSplineWarpToLandmarks.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkFitSplineWarpToLandmarks.cxx [ 27%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkFitSplineWarpToXformList.cxx.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkFitSplineWarpToXformList.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkFitSplineWarpToXformList.cxx [ 27%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkFitToXformListBase.cxx.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkFitSplineWarpToXformList.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkFitSplineWarpToXformList.cxx cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkFitToXformListBase.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkFitToXformListBase.cxx [ 28%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkFunctional.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkFunctional.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkFunctional.cxx [ 28%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkGeneralLinearModel.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkGeneralLinearModel.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkGeneralLinearModel.cxx [ 28%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkHistogram.cxx.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkHistogram.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkHistogram.cxx [ 28%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkHypothesisTests.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkHypothesisTests.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkHypothesisTests.cxx +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkHistogram.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkHistogram.cxx [ 28%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperation.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkImageOperation.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperation.cxx +[ 28%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationCropThreshold.cxx.o [ 29%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationCropRegion.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkImageOperationCropRegion.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationCropRegion.cxx -[ 29%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationCropThreshold.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkImageOperationCropThreshold.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationCropThreshold.cxx [ 29%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationDistanceMap.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkImageOperationDistanceMap.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationDistanceMap.cxx [ 29%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationDownsample.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkImageOperationDownsample.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationDownsample.cxx [ 29%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationHistogramEqualization.cxx.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkImageOperationHistogramEqualization.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationHistogramEqualization.cxx -[ 30%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationMapValues.cxx.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkImageOperationMapValues.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationMapValues.cxx -[ 30%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationRegionFilter.cxx.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkImageOperationRegionFilter.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationRegionFilter.cxx /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationCropThreshold.cxx: In member function 'virtual cmtk::UniformVolume::SmartPtr cmtk::ImageOperationCropThreshold::Apply(cmtk::UniformVolume::SmartPtr&)': /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationCropThreshold.cxx:41:24: warning: format '%d' expects argument of type 'int', but argument 2 has type 'long long int' [-Wformat=] 41 | printf( "AutoCrop %d,%d,%d,%d,%d,%d\n", cropRegion.From()[0], cropRegion.From()[1], cropRegion.From()[2], cropRegion.To()[0], cropRegion.To()[1], cropRegion.To()[2] ); @@ -1685,16 +1746,15 @@ | | | int | %lld +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkImageOperationHistogramEqualization.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationHistogramEqualization.cxx +[ 30%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationMapValues.cxx.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkImageOperationMapValues.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationMapValues.cxx +[ 30%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationRegionFilter.cxx.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkImageOperationRegionFilter.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationRegionFilter.cxx [ 30%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationResampleIsotropic.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkImageOperationResampleIsotropic.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationResampleIsotropic.cxx [ 30%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationScaleToRange.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkImageOperationScaleToRange.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationScaleToRange.cxx -[ 30%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationThreshold.cxx.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkImageOperationThreshold.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationThreshold.cxx -[ 31%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationOtsuThreshold.cxx.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkImageOperationOtsuThreshold.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationOtsuThreshold.cxx -[ 31%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationPruneHistogram.cxx.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkImageOperationPruneHistogram.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationPruneHistogram.cxx /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationDownsample.cxx: In static member function 'static void cmtk::ImageOperationDownsample::NewGeneric(bool, const char*)': /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationDownsample.cxx:54:43: warning: format '%d' expects argument of type 'int*', but argument 3 has type 'cmtk::Types::GridIndexType*' {aka 'long long int*'} [-Wformat=] 54 | const size_t nFactors = sscanf( arg, "%5d,%5d,%5d", &factorsX, &factorsY, &factorsZ ); @@ -1714,13 +1774,23 @@ | | | | int* cmtk::Types::GridIndexType* {aka long long int*} | %5lld -[ 31%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationRevert.cxx.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkImageOperationRevert.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationRevert.cxx In file included from /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationHistogramEqualization.cxx:34: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ +[ 31%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationOtsuThreshold.cxx.o +[ 30%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationThreshold.cxx.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkImageOperationOtsuThreshold.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationOtsuThreshold.cxx +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkImageOperationThreshold.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationThreshold.cxx +[ 31%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationPruneHistogram.cxx.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkImageOperationPruneHistogram.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationPruneHistogram.cxx +In file included from /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationScaleToRange.cxx:33: +/build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] + 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); + | ^~~~~ [ 31%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkJointHistogram.cxx.o +[ 31%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationRevert.cxx.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkImageOperationRevert.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationRevert.cxx cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkJointHistogram.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkJointHistogram.cxx [ 31%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkJointHistogramBase.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkJointHistogramBase.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkJointHistogramBase.cxx @@ -1730,17 +1800,13 @@ cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkLandmarkPair.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkLandmarkPair.cxx [ 32%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkLandmarkList.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkLandmarkList.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkLandmarkList.cxx -[ 32%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkLandmarkPairList.cxx.o +[ 33%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkMagphanEMR051.cxx.o +[ 33%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkLandmarkPairList.cxx.o +[ 32%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkMathFunctionWrappers.cxx.o +[ 33%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkMagphanEMR051_GetPhantomImage.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkLandmarkPairList.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkLandmarkPairList.cxx -In file included from /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationScaleToRange.cxx:33: -/build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] - 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); - | ^~~~~ -[ 32%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkMagphanEMR051.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkMagphanEMR051.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMagphanEMR051.cxx -[ 33%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkMagphanEMR051_GetPhantomImage.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkMagphanEMR051_GetPhantomImage.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMagphanEMR051_GetPhantomImage.cxx -[ 33%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkMathFunctionWrappers.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkMathFunctionWrappers.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMathFunctionWrappers.cxx [ 33%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkMathUtil_LinAlg.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkMathUtil_LinAlg.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMathUtil_LinAlg.cxx @@ -1748,31 +1814,31 @@ cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkMathUtil_Random.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMathUtil_Random.cxx [ 33%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkMathUtil_Statistics.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkMathUtil_Statistics.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMathUtil_Statistics.cxx +[ 33%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkMatrix4x4.cxx.o +[ 34%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkMetaInformationObject.cxx.o [ 34%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkMatrix3x3.cxx.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkMetaInformationObject.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMetaInformationObject.cxx cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkMatrix3x3.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMatrix3x3.cxx -[ 34%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkMatrix4x4.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkMatrix4x4.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMatrix4x4.cxx -[ 34%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkMetaInformationObject.cxx.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkMetaInformationObject.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMetaInformationObject.cxx [ 34%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkParametricPlane.cxx.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkParametricPlane.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkParametricPlane.cxx [ 34%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkPolynomialXform.cxx.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkParametricPlane.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkParametricPlane.cxx cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkPolynomialXform.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkPolynomialXform.cxx [ 34%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkScalarImage.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkScalarImage.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkScalarImage.cxx -[ 35%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkSegmentationLabel.cxx.o [ 35%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkScalarImageGradientField.cxx.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkSegmentationLabel.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkSegmentationLabel.cxx cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkScalarImageGradientField.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkScalarImageGradientField.cxx +[ 35%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkSegmentationLabel.cxx.o [ 35%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkSplineWarpXform.cxx.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkSegmentationLabel.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkSegmentationLabel.cxx cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkSplineWarpXform.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkSplineWarpXform.cxx [ 35%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkSplineWarpXform_Inverse.cxx.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkSplineWarpXform_Inverse.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkSplineWarpXform_Inverse.cxx [ 35%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkSplineWarpXform_Jacobian.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkSplineWarpXform_Jacobian.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkSplineWarpXform_Jacobian.cxx +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkSplineWarpXform_Inverse.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkSplineWarpXform_Inverse.cxx [ 36%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkSplineWarpXform_Rigidity.cxx.o +[ 35%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkSplineWarpXformUniformVolume.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkSplineWarpXform_Rigidity.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkSplineWarpXform_Rigidity.cxx -[ 36%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkSplineWarpXformUniformVolume.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkSplineWarpXformUniformVolume.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkSplineWarpXformUniformVolume.cxx [ 36%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkTransformChangeToSpaceAffine.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkTransformChangeToSpaceAffine.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkTransformChangeToSpaceAffine.cxx @@ -1782,21 +1848,21 @@ cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkTransformedVolumeAxes.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkTransformedVolumeAxes.cxx [ 37%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkTypedArray.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkTypedArray.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkTypedArray.cxx -[ 37%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkTypedArrayFunctionHistogramMatching.cxx.o [ 37%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkTypedArray_Statistics.cxx.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkTypedArrayFunctionHistogramMatching.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkTypedArrayFunctionHistogramMatching.cxx cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkTypedArray_Statistics.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkTypedArray_Statistics.cxx +[ 37%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkTypedArrayFunctionHistogramMatching.cxx.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkTypedArrayFunctionHistogramMatching.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkTypedArrayFunctionHistogramMatching.cxx [ 37%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkTypedArrayFunctionHistogramEqualization.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkTypedArrayFunctionHistogramEqualization.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkTypedArrayFunctionHistogramEqualization.cxx [ 37%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkTypedArrayNoiseEstimatorNaiveGaussian.cxx.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkTypedArrayNoiseEstimatorNaiveGaussian.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkTypedArrayNoiseEstimatorNaiveGaussian.cxx [ 38%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkTypes.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkTypes.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkTypes.cxx +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkTypedArrayNoiseEstimatorNaiveGaussian.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkTypedArrayNoiseEstimatorNaiveGaussian.cxx +[ 38%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformVolume.cxx.o +[ 38%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformVolume_Crop.cxx.o [ 38%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformDistanceMap.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkUniformDistanceMap.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkUniformDistanceMap.cxx -[ 38%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformVolume.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkUniformVolume.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkUniformVolume.cxx -[ 38%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformVolume_Crop.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkUniformVolume_Crop.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkUniformVolume_Crop.cxx [ 38%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformVolume_Differential.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkUniformVolume_Differential.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkUniformVolume_Differential.cxx @@ -1826,9 +1892,9 @@ cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkWarpXform.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkWarpXform.cxx [ 41%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkXform.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkXform.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkXform.cxx -[ 41%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkXformList.cxx.o [ 41%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkXform_Inverse.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkXform_Inverse.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkXform_Inverse.cxx +[ 41%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkXformList.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkXformList.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkXformList.cxx [ 42%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkXformListEntry.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkXformListEntry.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkXformListEntry.cxx @@ -1846,44 +1912,36 @@ make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f libs/IO/CMakeFiles/cmtkIO.dir/build.make libs/IO/CMakeFiles/cmtkIO.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[ 42%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkClassStreamStudyList.cxx.o -[ 42%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkAffineXformITKIO.cxx.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkClassStreamStudyList.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkClassStreamStudyList.cxx -[ 42%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkSplineWarpXformITKIO.cxx.o -[ 42%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkClassStreamAffineXform.cxx.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkAffineXformITKIO.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkAffineXformITKIO.cxx [ 43%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkClassStreamParametricPlane.cxx.o +[ 43%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkClassStreamStudyList.cxx.o +[ 43%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkClassStreamAffineXform.cxx.o +[ 43%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkAffineXformITKIO.cxx.o [ 43%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkClassStreamPolynomialXform.cxx.o +[ 43%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkSplineWarpXformITKIO.cxx.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkAffineXformITKIO.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkAffineXformITKIO.cxx +[ 43%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkClassStreamWarpXform.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkSplineWarpXformITKIO.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkSplineWarpXformITKIO.cxx cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkClassStreamAffineXform.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkClassStreamAffineXform.cxx cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkClassStreamParametricPlane.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkClassStreamParametricPlane.cxx -[ 43%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkPhantomIO_MagphanEMR051.cxx.o -[ 43%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkClassStreamWarpXform.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkClassStreamPolynomialXform.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkClassStreamPolynomialXform.cxx -[ 43%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkFileFormat.cxx.o -[ 43%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkImageOperationMatchIntensities.cxx.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkPhantomIO_MagphanEMR051.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkPhantomIO_MagphanEMR051.cxx -[ 44%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkGroupwiseRegistrationFunctionalIO.cxx.o -[ 44%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkImageOperationApplyMask.cxx.o -[ 44%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkImageStackDICOM.cxx.o -[ 44%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkImageFileDICOM.cxx.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkClassStreamStudyList.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkClassStreamStudyList.cxx cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkClassStreamWarpXform.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkClassStreamWarpXform.cxx +[ 44%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkImageFileDICOM.cxx.o +[ 44%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkGroupwiseRegistrationFunctionalIO.cxx.o +[ 44%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkFileFormat.cxx.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkImageFileDICOM.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.cxx cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkFileFormat.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkFileFormat.cxx cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkGroupwiseRegistrationFunctionalIO.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkGroupwiseRegistrationFunctionalIO.cxx -[ 45%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkLandmarkIO.cxx.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkImageFileDICOM.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.cxx +[ 44%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkImageOperationApplyMask.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkImageOperationApplyMask.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageOperationApplyMask.cxx +[ 44%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkImageOperationMatchIntensities.cxx.o +[ 44%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkImageStackDICOM.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkImageOperationMatchIntensities.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageOperationMatchIntensities.cxx cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkImageStackDICOM.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageStackDICOM.cxx +[ 45%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkLandmarkIO.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkLandmarkIO.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkLandmarkIO.cxx [ 45%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkLandmarkListIO.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkLandmarkListIO.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkLandmarkListIO.cxx -[ 45%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkSegmentationLabelIO.cxx.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkSegmentationLabelIO.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkSegmentationLabelIO.cxx -[ 45%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkSiemensCSAHeader.cxx.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkSiemensCSAHeader.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkSiemensCSAHeader.cxx -[ 45%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkStudy.cxx.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkStudy.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkStudy.cxx In file included from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.cxx:33: /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h:179:8: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] 179 | std::auto_ptr m_Dataset; @@ -1945,10 +2003,11 @@ /usr/include/c++/10/bits/unique_ptr.h:57:28: note: declared here 57 | template class auto_ptr; | ^~~~~~~~ -In file included from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageStackDICOM.h:38, - from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageStackDICOM.cxx:33: -/build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h:179:8: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] - 179 | std::auto_ptr m_Dataset; +[ 45%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkPhantomIO_MagphanEMR051.cxx.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkPhantomIO_MagphanEMR051.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkPhantomIO_MagphanEMR051.cxx +/build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.cxx: In constructor 'cmtk::ImageFileDICOM::ImageFileDICOM(const string&)': +/build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.cxx:155:8: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] + 155 | std::auto_ptr fileformat( new DcmFileFormat ); | ^~~~~~~~ In file included from /usr/include/c++/10/bits/locale_conv.h:41, from /usr/include/c++/10/locale:43, @@ -1962,16 +2021,13 @@ from /usr/include/dcmtk/dcmdata/dctypes.h:27, from /usr/include/dcmtk/dcmdata/dctk.h:28, from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h:43, - from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageStackDICOM.h:38, - from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageStackDICOM.cxx:33: + from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.cxx:33: /usr/include/c++/10/bits/unique_ptr.h:57:28: note: declared here 57 | template class auto_ptr; | ^~~~~~~~ -In file included from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageStackDICOM.h:38, - from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageStackDICOM.cxx:33: -/build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h:182:8: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] - 182 | std::auto_ptr m_Document; - | ^~~~~~~~ +/build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.cxx:164:26: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] + 164 | this->m_Dataset = std::auto_ptr( fileformat->getAndRemoveDataset() ); + | ^~~~~~~~ In file included from /usr/include/c++/10/bits/locale_conv.h:41, from /usr/include/c++/10/locale:43, from /usr/include/c++/10/iomanip:43, @@ -1984,17 +2040,13 @@ from /usr/include/dcmtk/dcmdata/dctypes.h:27, from /usr/include/dcmtk/dcmdata/dctk.h:28, from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h:43, - from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageStackDICOM.h:38, - from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageStackDICOM.cxx:33: + from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.cxx:33: /usr/include/c++/10/bits/unique_ptr.h:57:28: note: declared here 57 | template class auto_ptr; | ^~~~~~~~ -In file included from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageStackDICOM.h:38, - from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageStackDICOM.cxx:33: -/build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h: In member function 'void cmtk::ImageFileDICOM::ReleaseDocument()': -/build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h:164:29: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] - 164 | this->m_Document = std::auto_ptr( NULL ); - | ^~~~~~~~ +/build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.cxx:170:27: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] + 170 | this->m_Document = std::auto_ptr( new DiDocument( this->m_Dataset.get(), this->m_Dataset->getOriginalXfer(), CIF_AcrNemaCompatibility ) ); + | ^~~~~~~~ In file included from /usr/include/c++/10/bits/locale_conv.h:41, from /usr/include/c++/10/locale:43, from /usr/include/c++/10/iomanip:43, @@ -2007,14 +2059,18 @@ from /usr/include/dcmtk/dcmdata/dctypes.h:27, from /usr/include/dcmtk/dcmdata/dctk.h:28, from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h:43, - from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageStackDICOM.h:38, - from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageStackDICOM.cxx:33: + from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.cxx:33: /usr/include/c++/10/bits/unique_ptr.h:57:28: note: declared here 57 | template class auto_ptr; | ^~~~~~~~ -/build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.cxx: In constructor 'cmtk::ImageFileDICOM::ImageFileDICOM(const string&)': -/build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.cxx:155:8: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] - 155 | std::auto_ptr fileformat( new DcmFileFormat ); +[ 45%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkSegmentationLabelIO.cxx.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkSegmentationLabelIO.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkSegmentationLabelIO.cxx +[ 45%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkSiemensCSAHeader.cxx.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkSiemensCSAHeader.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkSiemensCSAHeader.cxx +In file included from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageStackDICOM.h:38, + from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageStackDICOM.cxx:33: +/build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h:179:8: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] + 179 | std::auto_ptr m_Dataset; | ^~~~~~~~ In file included from /usr/include/c++/10/bits/locale_conv.h:41, from /usr/include/c++/10/locale:43, @@ -2028,13 +2084,16 @@ from /usr/include/dcmtk/dcmdata/dctypes.h:27, from /usr/include/dcmtk/dcmdata/dctk.h:28, from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h:43, - from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.cxx:33: + from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageStackDICOM.h:38, + from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageStackDICOM.cxx:33: /usr/include/c++/10/bits/unique_ptr.h:57:28: note: declared here 57 | template class auto_ptr; | ^~~~~~~~ -/build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.cxx:164:26: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] - 164 | this->m_Dataset = std::auto_ptr( fileformat->getAndRemoveDataset() ); - | ^~~~~~~~ +In file included from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageStackDICOM.h:38, + from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageStackDICOM.cxx:33: +/build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h:182:8: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] + 182 | std::auto_ptr m_Document; + | ^~~~~~~~ In file included from /usr/include/c++/10/bits/locale_conv.h:41, from /usr/include/c++/10/locale:43, from /usr/include/c++/10/iomanip:43, @@ -2047,13 +2106,17 @@ from /usr/include/dcmtk/dcmdata/dctypes.h:27, from /usr/include/dcmtk/dcmdata/dctk.h:28, from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h:43, - from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.cxx:33: + from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageStackDICOM.h:38, + from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageStackDICOM.cxx:33: /usr/include/c++/10/bits/unique_ptr.h:57:28: note: declared here 57 | template class auto_ptr; | ^~~~~~~~ -/build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.cxx:170:27: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] - 170 | this->m_Document = std::auto_ptr( new DiDocument( this->m_Dataset.get(), this->m_Dataset->getOriginalXfer(), CIF_AcrNemaCompatibility ) ); - | ^~~~~~~~ +In file included from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageStackDICOM.h:38, + from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageStackDICOM.cxx:33: +/build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h: In member function 'void cmtk::ImageFileDICOM::ReleaseDocument()': +/build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h:164:29: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] + 164 | this->m_Document = std::auto_ptr( NULL ); + | ^~~~~~~~ In file included from /usr/include/c++/10/bits/locale_conv.h:41, from /usr/include/c++/10/locale:43, from /usr/include/c++/10/iomanip:43, @@ -2066,47 +2129,42 @@ from /usr/include/dcmtk/dcmdata/dctypes.h:27, from /usr/include/dcmtk/dcmdata/dctk.h:28, from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h:43, - from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.cxx:33: + from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageStackDICOM.h:38, + from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageStackDICOM.cxx:33: /usr/include/c++/10/bits/unique_ptr.h:57:28: note: declared here 57 | template class auto_ptr; | ^~~~~~~~ +[ 45%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkStudy.cxx.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkStudy.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkStudy.cxx [ 46%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkStudyList.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkStudyList.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkStudyList.cxx +[ 46%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkTypedStreamInput.cxx.o [ 46%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkTypedStream.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkTypedStream.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkTypedStream.cxx -[ 46%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkTypedStreamInput.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkTypedStreamInput.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkTypedStreamInput.cxx [ 46%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkTypedStreamOutput.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkTypedStreamOutput.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkTypedStreamOutput.cxx +/build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkTypedStreamOutput.cxx: In member function 'cmtk::TypedStream::Condition cmtk::TypedStreamOutput::WriteIntArray(const char*, const long long int*, int, int)': +/build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkTypedStreamOutput.cxx:564:25: warning: format '%ld' expects argument of type 'long int', but argument 3 has type 'long long int' [-Wformat=] + 564 | fprintf( File, "%ld ", array[i] ); + | ~~^ ~~~~~~~~ + | | | + | long int long long int + | %lld [ 46%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkTypedStreamStudylist.cxx.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkTypedStreamStudylist.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkTypedStreamStudylist.cxx +[ 46%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileAnalyze.cxx.o [ 47%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeFromFile.cxx.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkTypedStreamStudylist.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkTypedStreamStudylist.cxx cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFile.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkVolumeFromFile.cxx -[ 47%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileAnalyze.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileAnalyze.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkVolumeFromFileAnalyze.cxx [ 47%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileBioRad.cxx.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileBioRad.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkVolumeFromFileBioRad.cxx +[ 47%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileNRRD.cxx.o [ 47%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileMetaFile.cxx.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileBioRad.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkVolumeFromFileBioRad.cxx cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileMetaFile.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkVolumeFromFileMetaFile.cxx -[ 47%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileNRRD.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileNRRD.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkVolumeFromFileNRRD.cxx [ 48%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileNifti.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileNifti.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkVolumeFromFileNifti.cxx -[ 48%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileVanderbilt.cxx.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileVanderbilt.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkVolumeFromFileVanderbilt.cxx -/build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkTypedStreamOutput.cxx: In member function 'cmtk::TypedStream::Condition cmtk::TypedStreamOutput::WriteIntArray(const char*, const long long int*, int, int)': -/build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkTypedStreamOutput.cxx:564:25: warning: format '%ld' expects argument of type 'long int', but argument 3 has type 'long long int' [-Wformat=] - 564 | fprintf( File, "%ld ", array[i] ); - | ~~^ ~~~~~~~~ - | | | - | long int long long int - | %lld -[ 48%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeFromSlices.cxx.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkVolumeFromSlices.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkVolumeFromSlices.cxx -[ 48%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeIO.cxx.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkVolumeIO.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkVolumeIO.cxx -[ 48%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkXformIO.cxx.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkXformIO.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkXformIO.cxx /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkVolumeFromFileMetaFile.cxx: In static member function 'static void cmtk::VolumeFromFile::WriteMetaImage(const string&, const cmtk::UniformVolume&)': /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkVolumeFromFileMetaFile.cxx:87:33: warning: format '%d' expects argument of type 'int', but argument 3 has type 'long long int' [-Wformat=] 87 | fprintf( outfile, "DimSize = %d %d %d\n", volume.m_Dims[AXIS_X], volume.m_Dims[AXIS_Y], volume.m_Dims[AXIS_Z] ); @@ -2126,25 +2184,33 @@ | | | int | %lld -[ 49%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkXformListIO.cxx.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkXformListIO.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkXformListIO.cxx -[ 49%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkXformIONifti.cxx.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkXformIONifti.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkXformIONifti.cxx -[ 49%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkXformIONrrd.cxx.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkXformIONrrd.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkXformIONrrd.cxx +[ 48%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileVanderbilt.cxx.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileVanderbilt.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkVolumeFromFileVanderbilt.cxx +[ 48%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeFromSlices.cxx.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkVolumeFromSlices.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkVolumeFromSlices.cxx +[ 48%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeIO.cxx.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkVolumeIO.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkVolumeIO.cxx +[ 48%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkXformIO.cxx.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkXformIO.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkXformIO.cxx /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkVolumeFromFileVanderbilt.cxx: In static member function 'static const SmartPtr cmtk::VolumeFromFile::ReadVanderbilt(const string&)': /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkVolumeFromFileVanderbilt.cxx:58:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 58 | fgets( line, 96, fp ); | ~~~~~^~~~~~~~~~~~~~~~ +[ 49%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkXformListIO.cxx.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkXformListIO.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkXformListIO.cxx +[ 49%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkXformIONrrd.cxx.o +[ 49%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkXformIONifti.cxx.o [ 49%] Building C object libs/IO/CMakeFiles/cmtkIO.dir/nifti1_io_math.c.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkXformIONifti.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkXformIONifti.cxx +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkXformIONrrd.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkXformIONrrd.cxx cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/IO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/cmtkIO.dir/nifti1_io_math.c.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/nifti1_io_math.c [ 49%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkDICOM.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkDICOM.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkDICOM.cxx [ 50%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeFromStudy.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkVolumeFromStudy.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkVolumeFromStudy.cxx [ 50%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileDICOM.cxx.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileDICOM.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkVolumeFromFileDICOM.cxx [ 50%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkSQLite.cxx.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileDICOM.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkVolumeFromFileDICOM.cxx cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkSQLite.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkSQLite.cxx In file included from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkDICOM.cxx:35: /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkDICOM.h:137:8: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] @@ -2190,7 +2256,7 @@ /usr/include/c++/10/bits/unique_ptr.h:57:28: note: declared here 57 | template class auto_ptr; | ^~~~~~~~ -In file included from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkVolumeFromFileDICOM.cxx:37: +In file included from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkVolumeFromStudy.cxx:43: /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkDICOM.h:137:8: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] 137 | std::auto_ptr m_Document; | ^~~~~~~~ @@ -2201,11 +2267,11 @@ from /usr/include/dcmtk/dcmdata/dctagkey.h:27, from /usr/include/dcmtk/dcmdata/dcdeftag.h:18, from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkDICOM.h:40, - from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkVolumeFromFileDICOM.cxx:37: + from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkVolumeFromStudy.cxx:43: /usr/include/c++/10/bits/unique_ptr.h:57:28: note: declared here 57 | template class auto_ptr; | ^~~~~~~~ -In file included from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkVolumeFromStudy.cxx:43: +In file included from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkVolumeFromFileDICOM.cxx:37: /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkDICOM.h:137:8: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] 137 | std::auto_ptr m_Document; | ^~~~~~~~ @@ -2216,7 +2282,7 @@ from /usr/include/dcmtk/dcmdata/dctagkey.h:27, from /usr/include/dcmtk/dcmdata/dcdeftag.h:18, from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkDICOM.h:40, - from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkVolumeFromStudy.cxx:43: + from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkVolumeFromFileDICOM.cxx:37: /usr/include/c++/10/bits/unique_ptr.h:57:28: note: declared here 57 | template class auto_ptr; | ^~~~~~~~ @@ -2234,40 +2300,20 @@ make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f libs/Registration/CMakeFiles/cmtkRegistration.dir/build.make libs/Registration/CMakeFiles/cmtkRegistration.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +[ 50%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkAffineRegistration.cxx.o +[ 50%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkBestNeighbourOptimizer.cxx.o +[ 50%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkBestDirectionOptimizer.cxx.o +[ 50%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkElasticRegistrationCommandLine.cxx.o +[ 50%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkCongealingFunctional.cxx.o [ 51%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkAffineRegistrationCommandLine.cxx.o -[ 51%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkAffineRegistration.cxx.o -[ 51%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkBestDirectionOptimizer.cxx.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkAffineRegistrationCommandLine.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkAffineRegistrationCommandLine.cxx -[ 51%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkBestNeighbourOptimizer.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkAffineRegistration.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkAffineRegistration.cxx +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkAffineRegistrationCommandLine.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkAffineRegistrationCommandLine.cxx +[ 52%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkEchoPlanarUnwarpFunctional.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkBestDirectionOptimizer.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkBestDirectionOptimizer.cxx -[ 51%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkCongealingFunctional.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkBestNeighbourOptimizer.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkBestNeighbourOptimizer.cxx -[ 52%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkEchoPlanarUnwarpFunctional.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkCongealingFunctional.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkCongealingFunctional.cxx -[ 52%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkElasticRegistrationCommandLine.cxx.o -[ 52%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkElasticRegistration.cxx.o -[ 52%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalAffineInitializer.cxx.o -[ 52%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplate_SplineWarp_IO.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkEchoPlanarUnwarpFunctional.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkEchoPlanarUnwarpFunctional.cxx cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkElasticRegistrationCommandLine.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkElasticRegistrationCommandLine.cxx -[ 52%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalBase.cxx.o -[ 53%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplate.cxx.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalAffineInitializer.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkGroupwiseRegistrationFunctionalAffineInitializer.cxx -[ 53%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplate_Affine_IO.cxx.o -[ 53%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplate_SplineWarp.cxx.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkElasticRegistration.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkElasticRegistration.cxx -[ 54%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationOutput.cxx.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalBase.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkGroupwiseRegistrationFunctionalBase.cxx -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplate.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkGroupwiseRegistrationFunctionalXformTemplate.cxx -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplate_Affine_IO.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkGroupwiseRegistrationFunctionalXformTemplate_Affine_IO.cxx -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplate_SplineWarp.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkGroupwiseRegistrationFunctionalXformTemplate_SplineWarp.cxx -[ 54%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplateBase.cxx.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplate_SplineWarp_IO.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkGroupwiseRegistrationFunctionalXformTemplate_SplineWarp_IO.cxx -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationOutput.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkGroupwiseRegistrationOutput.cxx -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplateBase.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkGroupwiseRegistrationFunctionalXformTemplateBase.cxx -[ 54%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationRMIFunctional.cxx.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationRMIFunctional.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkGroupwiseRegistrationRMIFunctional.cxx In file included from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelRegistration.h:52, from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkAffineRegistration.h:38, from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkAffineRegistration.cxx:33: @@ -2275,8 +2321,9 @@ 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelRegistration.h:52, - from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkElasticRegistration.h:38, - from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkElasticRegistration.cxx:33: + from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkAffineRegistration.h:38, + from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkAffineRegistrationCommandLine.h:38, + from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkAffineRegistrationCommandLine.cxx:33: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ @@ -2287,74 +2334,81 @@ /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ +[ 52%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkElasticRegistration.cxx.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkElasticRegistration.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkElasticRegistration.cxx +[ 52%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalAffineInitializer.cxx.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalAffineInitializer.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkGroupwiseRegistrationFunctionalAffineInitializer.cxx +[ 52%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalBase.cxx.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalBase.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkGroupwiseRegistrationFunctionalBase.cxx In file included from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelRegistration.h:52, - from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkAffineRegistration.h:38, - from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkAffineRegistrationCommandLine.h:38, - from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkAffineRegistrationCommandLine.cxx:33: + from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkElasticRegistration.h:38, + from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkElasticRegistration.cxx:33: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ +[ 53%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplate.cxx.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplate.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkGroupwiseRegistrationFunctionalXformTemplate.cxx +[ 53%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplate_Affine_IO.cxx.o +[ 53%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplate_SplineWarp.cxx.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplate_SplineWarp.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkGroupwiseRegistrationFunctionalXformTemplate_SplineWarp.cxx +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplate_Affine_IO.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkGroupwiseRegistrationFunctionalXformTemplate_Affine_IO.cxx +[ 53%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplate_SplineWarp_IO.cxx.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplate_SplineWarp_IO.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkGroupwiseRegistrationFunctionalXformTemplate_SplineWarp_IO.cxx +[ 53%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplateBase.cxx.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplateBase.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkGroupwiseRegistrationFunctionalXformTemplateBase.cxx +[ 54%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationOutput.cxx.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationOutput.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkGroupwiseRegistrationOutput.cxx +[ 54%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationRMIFunctional.cxx.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationRMIFunctional.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkGroupwiseRegistrationRMIFunctional.cxx +[ 54%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairRegistration.cxx.o [ 54%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkHausdorffDistance.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkHausdorffDistance.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkHausdorffDistance.cxx -[ 54%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairRegistration.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairRegistration.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairRegistration.cxx -[ 54%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairRegistrationFunctional.cxx.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairRegistrationFunctional.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairRegistrationFunctional.cxx [ 55%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairRegistrationImagePreprocessor.cxx.o +[ 55%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairRegistrationFunctional.cxx.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairRegistrationFunctional.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairRegistrationFunctional.cxx cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairRegistrationImagePreprocessor.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairRegistrationImagePreprocessor.cxx -[ 55%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairAffineRegistration.cxx.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairAffineRegistration.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairAffineRegistration.cxx -[ 55%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairAffineRegistrationCommandLine.cxx.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairAffineRegistrationCommandLine.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairAffineRegistrationCommandLine.cxx In file included from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairRegistration.h:39, from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairRegistration.cxx:33: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ +[ 55%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairAffineRegistration.cxx.o +[ 55%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairAffineRegistrationCommandLine.cxx.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairAffineRegistrationCommandLine.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairAffineRegistrationCommandLine.cxx +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairAffineRegistration.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairAffineRegistration.cxx In file included from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairRegistration.h:39, from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairRegistrationImagePreprocessor.cxx:33: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ +[ 55%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairNonrigidRegistration.cxx.o [ 55%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairAffineRegistrationFunctional.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairAffineRegistrationFunctional.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairAffineRegistrationFunctional.cxx -[ 55%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairNonrigidRegistration.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairNonrigidRegistration.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairNonrigidRegistration.cxx -[ 56%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairNonrigidRegistrationCommandLine.cxx.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairNonrigidRegistrationCommandLine.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairNonrigidRegistrationCommandLine.cxx -[ 56%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairNonrigidRegistrationFunctional.cxx.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairNonrigidRegistrationFunctional.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairNonrigidRegistrationFunctional.cxx -[ 56%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityJointHistogram.cxx.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityJointHistogram.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairSimilarityJointHistogram.cxx -[ 56%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasure.cxx.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasure.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairSimilarityMeasure.cxx In file included from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairRegistration.h:39, from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairAffineRegistration.h:41, - from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairAffineRegistration.cxx:33: + from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairAffineRegistrationCommandLine.h:38, + from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairAffineRegistrationCommandLine.cxx:33: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairRegistration.h:39, from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairAffineRegistration.h:41, - from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairAffineRegistrationCommandLine.h:38, - from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairAffineRegistrationCommandLine.cxx:33: + from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairAffineRegistration.cxx:33: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ -[ 56%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasureCR.cxx.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasureCR.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairSimilarityMeasureCR.cxx +[ 56%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairNonrigidRegistrationCommandLine.cxx.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairNonrigidRegistrationCommandLine.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairNonrigidRegistrationCommandLine.cxx In file included from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairRegistration.h:39, from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairNonrigidRegistration.h:40, from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairNonrigidRegistration.cxx:33: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ -[ 57%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasureMSD.cxx.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasureMSD.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairSimilarityMeasureMSD.cxx -[ 57%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasureNCC.cxx.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasureNCC.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairSimilarityMeasureNCC.cxx -[ 57%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasureRMS.cxx.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasureRMS.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairSimilarityMeasureRMS.cxx +[ 56%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairNonrigidRegistrationFunctional.cxx.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairNonrigidRegistrationFunctional.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairNonrigidRegistrationFunctional.cxx In file included from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairRegistration.h:39, from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairNonrigidRegistration.h:40, from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairNonrigidRegistrationCommandLine.h:38, @@ -2362,6 +2416,18 @@ /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ +[ 56%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityJointHistogram.cxx.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityJointHistogram.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairSimilarityJointHistogram.cxx +[ 56%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasure.cxx.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasure.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairSimilarityMeasure.cxx +[ 56%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasureCR.cxx.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasureCR.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairSimilarityMeasureCR.cxx +[ 57%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasureMSD.cxx.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasureMSD.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairSimilarityMeasureMSD.cxx +[ 57%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasureNCC.cxx.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasureNCC.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairSimilarityMeasureNCC.cxx +[ 57%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasureRMS.cxx.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasureRMS.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairSimilarityMeasureRMS.cxx [ 57%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairSymmetricAffineRegistrationFunctional.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairSymmetricAffineRegistrationFunctional.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairSymmetricAffineRegistrationFunctional.cxx [ 57%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairSymmetricNonrigidRegistrationFunctional.cxx.o @@ -2372,6 +2438,11 @@ cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImageSymmetryPlaneFunctional.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImageSymmetryPlaneFunctional.cxx [ 58%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImageSymmetryPlaneFunctionalBase.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImageSymmetryPlaneFunctionalBase.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImageSymmetryPlaneFunctionalBase.cxx +In file included from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImageSymmetryPlaneCommandLineBase.h:43, + from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImageSymmetryPlaneCommandLineBase.cxx:33: +/build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] + 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); + | ^~~~~ [ 58%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkMakeInitialAffineTransformation.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkMakeInitialAffineTransformation.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkMakeInitialAffineTransformation.cxx [ 58%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkMultiChannelRegistrationFunctionalBase.cxx.o @@ -2380,11 +2451,6 @@ cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkProtocolCallback.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkProtocolCallback.cxx [ 59%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkReformatVolume.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkReformatVolume.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkReformatVolume.cxx -In file included from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImageSymmetryPlaneCommandLineBase.h:43, - from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImageSymmetryPlaneCommandLineBase.cxx:33: -/build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] - 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); - | ^~~~~ [ 59%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkRegistrationCallback.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkRegistrationCallback.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkRegistrationCallback.cxx [ 59%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkRegistrationJointHistogram.cxx.o @@ -2418,20 +2484,20 @@ [ 62%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingMeanSquaredDifference.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingMeanSquaredDifference.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelMatchingMeanSquaredDifference.cxx [ 62%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingMetric.cxx.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingMetric.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelMatchingMetric.cxx [ 62%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingMetric_Type.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingMetric_Type.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelMatchingMetric_Type.cxx +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingMetric.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelMatchingMetric.cxx [ 62%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkVoxelRegistration.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkVoxelRegistration.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelRegistration.cxx [ 63%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkVoxelRegistrationImagePreprocessor.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkVoxelRegistrationImagePreprocessor.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelRegistrationImagePreprocessor.cxx -[ 63%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImageXformDB.cxx.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImageXformDB.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImageXformDB.cxx In file included from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelRegistration.h:52, from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelRegistration.cxx:33: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ +[ 63%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImageXformDB.cxx.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImageXformDB.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImageXformDB.cxx In file included from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelRegistration.h:52, from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelRegistrationImagePreprocessor.cxx:33: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] @@ -2464,75 +2530,75 @@ make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/build.make libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[ 63%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalBinaryShapeBasedAveraging.cxx.o -[ 63%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalVoting.cxx.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalBinaryShapeBasedAveraging.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkLabelCombinationLocalBinaryShapeBasedAveraging.cxx -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalVoting.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkLabelCombinationLocalVoting.cxx -[ 63%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkAtlasSegmentation.cxx.o [ 63%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkEntropyMinimizationIntensityCorrectionFunctionalBase.cxx.o [ 64%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkEntropyMinimizationIntensityCorrectionFunctional.cxx.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkAtlasSegmentation.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkAtlasSegmentation.cxx +[ 64%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkAtlasSegmentation.cxx.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkEntropyMinimizationIntensityCorrectionFunctional.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkEntropyMinimizationIntensityCorrectionFunctional.cxx +[ 64%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalBinaryShapeBasedAveraging.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkEntropyMinimizationIntensityCorrectionFunctionalBase.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkEntropyMinimizationIntensityCorrectionFunctionalBase.cxx +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkAtlasSegmentation.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkAtlasSegmentation.cxx [ 64%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalShapeBasedAveraging.cxx.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkEntropyMinimizationIntensityCorrectionFunctional.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkEntropyMinimizationIntensityCorrectionFunctional.cxx -[ 64%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalWeighting.cxx.o -[ 65%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationMultiClassSTAPLE.cxx.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalBinaryShapeBasedAveraging.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkLabelCombinationLocalBinaryShapeBasedAveraging.cxx cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalShapeBasedAveraging.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkLabelCombinationLocalShapeBasedAveraging.cxx -[ 65%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationSTAPLE.cxx.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalWeighting.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkLabelCombinationLocalWeighting.cxx -[ 65%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationVoting.cxx.o -[ 65%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationShapeBasedAveraging.cxx.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationMultiClassSTAPLE.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkLabelCombinationMultiClassSTAPLE.cxx -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationVoting.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkLabelCombinationVoting.cxx -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationSTAPLE.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkLabelCombinationSTAPLE.cxx -[ 66%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkLeastSquaresPolynomialIntensityBiasField.cxx.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationShapeBasedAveraging.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkLabelCombinationShapeBasedAveraging.cxx -[ 66%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationShapeBasedAveragingInterpolation.cxx.o -[ 66%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkOverlapMeasures.cxx.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkLeastSquaresPolynomialIntensityBiasField.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkLeastSquaresPolynomialIntensityBiasField.cxx -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationShapeBasedAveragingInterpolation.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkLabelCombinationShapeBasedAveragingInterpolation.cxx -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkOverlapMeasures.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkOverlapMeasures.cxx -[ 66%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkSimpleLevelset.cxx.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkSimpleLevelset.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkSimpleLevelset.cxx In file included from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelRegistration.h:52, from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkAffineRegistration.h:38, from /build/cmtk-3.3.1p1+dfsg/libs/Recon/cmtkVolumeInjectionReconstruction.h:40, - from /build/cmtk-3.3.1p1+dfsg/libs/Recon/cmtkInverseInterpolationVolumeReconstructionBase.h:40, - from /build/cmtk-3.3.1p1+dfsg/libs/Recon/cmtkInverseInterpolationVolumeReconstructionBase.cxx:37: + from /build/cmtk-3.3.1p1+dfsg/libs/Recon/cmtkVolumeInjectionReconstruction.cxx:35: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ -[ 66%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkSimpleLevelsetCommandLineBase.cxx.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkSimpleLevelsetCommandLineBase.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkSimpleLevelsetCommandLineBase.cxx In file included from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelRegistration.h:52, from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkAffineRegistration.h:38, - from /build/cmtk-3.3.1p1+dfsg/libs/Recon/cmtkVolumeInjectionReconstruction.h:40, - from /build/cmtk-3.3.1p1+dfsg/libs/Recon/cmtkVolumeInjectionReconstruction.cxx:35: + from /build/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkAtlasSegmentation.cxx:36: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelRegistration.h:52, from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkAffineRegistration.h:38, - from /build/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkAtlasSegmentation.cxx:36: + from /build/cmtk-3.3.1p1+dfsg/libs/Recon/cmtkVolumeInjectionReconstruction.h:40, + from /build/cmtk-3.3.1p1+dfsg/libs/Recon/cmtkInverseInterpolationVolumeReconstructionBase.h:40, + from /build/cmtk-3.3.1p1+dfsg/libs/Recon/cmtkInverseInterpolationVolumeReconstructionBase.cxx:37: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ -[ 66%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkDetectPhantomMagphanEMR051.cxx.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkDetectPhantomMagphanEMR051.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkDetectPhantomMagphanEMR051.cxx -[ 67%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkSphereDetectionBipolarMatchedFilterFFT.cxx.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkSphereDetectionBipolarMatchedFilterFFT.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkSphereDetectionBipolarMatchedFilterFFT.cxx -[ 67%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkSphereDetectionNormalizedBipolarMatchedFilterFFT.cxx.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkSphereDetectionNormalizedBipolarMatchedFilterFFT.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkSphereDetectionNormalizedBipolarMatchedFilterFFT.cxx +[ 64%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalVoting.cxx.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalVoting.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkLabelCombinationLocalVoting.cxx +[ 64%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalWeighting.cxx.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalWeighting.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkLabelCombinationLocalWeighting.cxx +[ 65%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationMultiClassSTAPLE.cxx.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationMultiClassSTAPLE.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkLabelCombinationMultiClassSTAPLE.cxx +[ 65%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationSTAPLE.cxx.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationSTAPLE.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkLabelCombinationSTAPLE.cxx +[ 65%] Linking CXX shared library ../../bin/libcmtkRecon.so +[ 65%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationVoting.cxx.o +[ 65%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationShapeBasedAveraging.cxx.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationVoting.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkLabelCombinationVoting.cxx +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Recon && /usr/bin/cmake -E cmake_link_script CMakeFiles/cmtkRecon.dir/link.txt --verbose=1 +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationShapeBasedAveraging.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkLabelCombinationShapeBasedAveraging.cxx +/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -shared -Wl,-soname,libcmtkRecon.so -o ../../bin/libcmtkRecon.so CMakeFiles/cmtkRecon.dir/cmtkInverseInterpolationVolumeReconstructionBase.cxx.o CMakeFiles/cmtkRecon.dir/cmtkVolumeInjectionReconstruction.cxx.o -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../../bin/libcmtkRegistration.so ../../bin/libcmtkIO.so ../../bin/libcmtkBase.so ../../bin/libcmtkSystem.so -lbz2 ../../bin/libcmtkMxml.so -lfftw3_omp -lfftw3 -lfftw3_threads ../../bin/libcmtkNumerics.so ../../bin/libNrrdIO.so -lz -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd +make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +[ 65%] Built target cmtkRecon +[ 65%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationShapeBasedAveragingInterpolation.cxx.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationShapeBasedAveragingInterpolation.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkLabelCombinationShapeBasedAveragingInterpolation.cxx +[ 66%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkLeastSquaresPolynomialIntensityBiasField.cxx.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkLeastSquaresPolynomialIntensityBiasField.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkLeastSquaresPolynomialIntensityBiasField.cxx +[ 66%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkOverlapMeasures.cxx.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkOverlapMeasures.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkOverlapMeasures.cxx +[ 66%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkSimpleLevelset.cxx.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkSimpleLevelset.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkSimpleLevelset.cxx +[ 66%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkSimpleLevelsetCommandLineBase.cxx.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkSimpleLevelsetCommandLineBase.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkSimpleLevelsetCommandLineBase.cxx In file included from /build/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkSimpleLevelsetCommandLineBase.h:40, from /build/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkSimpleLevelsetCommandLineBase.cxx:33: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ -[ 67%] Linking CXX shared library ../../bin/libcmtkRecon.so -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Recon && /usr/bin/cmake -E cmake_link_script CMakeFiles/cmtkRecon.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -shared -Wl,-soname,libcmtkRecon.so -o ../../bin/libcmtkRecon.so CMakeFiles/cmtkRecon.dir/cmtkInverseInterpolationVolumeReconstructionBase.cxx.o CMakeFiles/cmtkRecon.dir/cmtkVolumeInjectionReconstruction.cxx.o -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../../bin/libcmtkRegistration.so ../../bin/libcmtkIO.so ../../bin/libcmtkBase.so ../../bin/libcmtkSystem.so -lbz2 ../../bin/libcmtkMxml.so -lfftw3_omp -lfftw3 -lfftw3_threads ../../bin/libcmtkNumerics.so ../../bin/libNrrdIO.so -lz -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[ 67%] Built target cmtkRecon +[ 66%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkDetectPhantomMagphanEMR051.cxx.o +[ 67%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkSphereDetectionBipolarMatchedFilterFFT.cxx.o +[ 67%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkSphereDetectionNormalizedBipolarMatchedFilterFFT.cxx.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkDetectPhantomMagphanEMR051.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkDetectPhantomMagphanEMR051.cxx +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkSphereDetectionBipolarMatchedFilterFFT.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkSphereDetectionBipolarMatchedFilterFFT.cxx +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkSphereDetectionNormalizedBipolarMatchedFilterFFT.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkSphereDetectionNormalizedBipolarMatchedFilterFFT.cxx [ 67%] Linking CXX shared library ../../bin/libcmtkSegmentation.so cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Segmentation && /usr/bin/cmake -E cmake_link_script CMakeFiles/cmtkSegmentation.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -shared -Wl,-soname,libcmtkSegmentation.so -o ../../bin/libcmtkSegmentation.so CMakeFiles/cmtkSegmentation.dir/cmtkAtlasSegmentation.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkEntropyMinimizationIntensityCorrectionFunctionalBase.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkEntropyMinimizationIntensityCorrectionFunctional.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalBinaryShapeBasedAveraging.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalShapeBasedAveraging.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalVoting.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalWeighting.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationMultiClassSTAPLE.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationSTAPLE.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationVoting.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationShapeBasedAveraging.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationShapeBasedAveragingInterpolation.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkLeastSquaresPolynomialIntensityBiasField.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkOverlapMeasures.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkSimpleLevelset.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkSimpleLevelsetCommandLineBase.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkDetectPhantomMagphanEMR051.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkSphereDetectionBipolarMatchedFilterFFT.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkSphereDetectionNormalizedBipolarMatchedFilterFFT.cxx.o -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../../bin/libcmtkRegistration.so -lfftw3_omp -lfftw3 -lfftw3_threads ../../bin/libcmtkIO.so ../../bin/libcmtkBase.so ../../bin/libcmtkSystem.so -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads ../../bin/libcmtkMxml.so ../../bin/libcmtkNumerics.so ../../bin/libNrrdIO.so -lz -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd @@ -2542,235 +2608,96 @@ make -f apps/CMakeFiles/dcm2image.dir/build.make apps/CMakeFiles/dcm2image.dir/depend make -f apps/CMakeFiles/asegment_sri24.dir/build.make apps/CMakeFiles/asegment_sri24.dir/depend make -f apps/CMakeFiles/dbtool.dir/build.make apps/CMakeFiles/dbtool.dir/depend -make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/detect_spheres_matched_filter.dir/DependInfo.cmake --color= make -f apps/CMakeFiles/warp.dir/build.make apps/CMakeFiles/warp.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/dcm2image.dir/DependInfo.cmake --color= -make -f apps/CMakeFiles/volume_reconstruction.dir/build.make apps/CMakeFiles/volume_reconstruction.dir/depend +make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/detect_spheres_matched_filter.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/asegment_sri24.dir/DependInfo.cmake --color= -make -f apps/CMakeFiles/volume_injection.dir/build.make apps/CMakeFiles/volume_injection.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/dbtool.dir/DependInfo.cmake --color= -make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/warp.dir/DependInfo.cmake --color= -make -f apps/CMakeFiles/unwarp_image_phantom.dir/build.make apps/CMakeFiles/unwarp_image_phantom.dir/depend -make -f apps/CMakeFiles/ttest.dir/build.make apps/CMakeFiles/ttest.dir/depend +make -f apps/CMakeFiles/volume_reconstruction.dir/build.make apps/CMakeFiles/volume_reconstruction.dir/depend +make -f apps/CMakeFiles/volume_injection.dir/build.make apps/CMakeFiles/volume_injection.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/volume_reconstruction.dir/DependInfo.cmake --color= -make -f apps/CMakeFiles/sympl.dir/build.make apps/CMakeFiles/sympl.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/volume_injection.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/unwarp_image_phantom.dir/DependInfo.cmake --color= -make -f apps/CMakeFiles/streamxform.dir/build.make apps/CMakeFiles/streamxform.dir/depend -make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/ttest.dir/DependInfo.cmake --color= -make -f apps/CMakeFiles/stream_pixels.dir/build.make apps/CMakeFiles/stream_pixels.dir/depend -make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/sympl.dir/DependInfo.cmake --color= -make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/streamxform.dir/DependInfo.cmake --color= -make -f apps/CMakeFiles/xform2scalar.dir/build.make apps/CMakeFiles/xform2scalar.dir/depend -make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/stream_pixels.dir/DependInfo.cmake --color= -make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/xform2scalar.dir/DependInfo.cmake --color= -make -f apps/CMakeFiles/filter.dir/build.make apps/CMakeFiles/filter.dir/depend -make -f apps/CMakeFiles/asegment.dir/build.make apps/CMakeFiles/asegment.dir/depend -Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/volume_reconstruction.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/volume_reconstruction.dir/depend.internal". -Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/volume_reconstruction.dir/depend.internal". -make -f apps/CMakeFiles/fit_spline_xform.dir/build.make apps/CMakeFiles/fit_spline_xform.dir/depend +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/warp.dir/DependInfo.cmake --color= +Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/asegment_sri24.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/asegment_sri24.dir/depend.internal". +Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/asegment_sri24.dir/depend.internal". +Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/detect_spheres_matched_filter.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/detect_spheres_matched_filter.dir/depend.internal". +Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/detect_spheres_matched_filter.dir/depend.internal". +Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/dcm2image.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/dcm2image.dir/depend.internal". +Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/dcm2image.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/dbtool.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/dbtool.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/dbtool.dir/depend.internal". -make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/filter.dir/DependInfo.cmake --color= Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/volume_injection.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/volume_injection.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/volume_injection.dir/depend.internal". -Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/dcm2image.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/dcm2image.dir/depend.internal". -Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/dcm2image.dir/depend.internal". -make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/asegment.dir/DependInfo.cmake --color= -Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/detect_spheres_matched_filter.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/detect_spheres_matched_filter.dir/depend.internal". -Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/detect_spheres_matched_filter.dir/depend.internal". -Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/asegment_sri24.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/asegment_sri24.dir/depend.internal". -Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/asegment_sri24.dir/depend.internal". -Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/sympl.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/sympl.dir/depend.internal". -Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/sympl.dir/depend.internal". -make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/fit_spline_xform.dir/DependInfo.cmake --color= Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/warp.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/warp.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/warp.dir/depend.internal". -Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/unwarp_image_phantom.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/unwarp_image_phantom.dir/depend.internal". -Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/unwarp_image_phantom.dir/depend.internal". -Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/stream_pixels.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/stream_pixels.dir/depend.internal". -Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/stream_pixels.dir/depend.internal". -Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/ttest.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/ttest.dir/depend.internal". -Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/ttest.dir/depend.internal". +Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/volume_reconstruction.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/volume_reconstruction.dir/depend.internal". +Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/volume_reconstruction.dir/depend.internal". Scanning dependencies of target dbtool -Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/streamxform.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/streamxform.dir/depend.internal". -Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/streamxform.dir/depend.internal". make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/dbtool.dir/build.make apps/CMakeFiles/dbtool.dir/build -Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/xform2scalar.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/xform2scalar.dir/depend.internal". -Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/xform2scalar.dir/depend.internal". make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -Scanning dependencies of target stream_pixels -Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/filter.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/filter.dir/depend.internal". -Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/filter.dir/depend.internal". -Scanning dependencies of target sympl -make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/asegment.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/asegment.dir/depend.internal". -Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/asegment.dir/depend.internal". -make -f apps/CMakeFiles/stream_pixels.dir/build.make apps/CMakeFiles/stream_pixels.dir/build -make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +Scanning dependencies of target asegment_sri24 +Scanning dependencies of target volume_injection Scanning dependencies of target dcm2image Scanning dependencies of target detect_spheres_matched_filter -make -f apps/CMakeFiles/sympl.dir/build.make apps/CMakeFiles/sympl.dir/build -make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -Scanning dependencies of target volume_reconstruction make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make -f apps/CMakeFiles/dcm2image.dir/build.make apps/CMakeFiles/dcm2image.dir/build -make -f apps/CMakeFiles/detect_spheres_matched_filter.dir/build.make apps/CMakeFiles/detect_spheres_matched_filter.dir/build -Scanning dependencies of target asegment_sri24 +make -f apps/CMakeFiles/volume_injection.dir/build.make apps/CMakeFiles/volume_injection.dir/build make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make -f apps/CMakeFiles/volume_reconstruction.dir/build.make apps/CMakeFiles/volume_reconstruction.dir/build -make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make -f apps/CMakeFiles/asegment_sri24.dir/build.make apps/CMakeFiles/asegment_sri24.dir/build -make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -Scanning dependencies of target volume_injection -Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/fit_spline_xform.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/fit_spline_xform.dir/depend.internal". -Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/fit_spline_xform.dir/depend.internal". -Scanning dependencies of target ttest -Scanning dependencies of target unwarp_image_phantom -make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -Scanning dependencies of target streamxform -make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' Scanning dependencies of target warp make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make -f apps/CMakeFiles/ttest.dir/build.make apps/CMakeFiles/ttest.dir/build -make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make -f apps/CMakeFiles/volume_injection.dir/build.make apps/CMakeFiles/volume_injection.dir/build +Scanning dependencies of target volume_reconstruction make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make -f apps/CMakeFiles/unwarp_image_phantom.dir/build.make apps/CMakeFiles/unwarp_image_phantom.dir/build -[ 68%] Building CXX object apps/CMakeFiles/dbtool.dir/dbtool.cxx.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/dbtool.dir/dbtool.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/dbtool.cxx -make -f apps/CMakeFiles/streamxform.dir/build.make apps/CMakeFiles/streamxform.dir/build -make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +make -f apps/CMakeFiles/detect_spheres_matched_filter.dir/build.make apps/CMakeFiles/detect_spheres_matched_filter.dir/build +make -f apps/CMakeFiles/dcm2image.dir/build.make apps/CMakeFiles/dcm2image.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make -f apps/CMakeFiles/warp.dir/build.make apps/CMakeFiles/warp.dir/build -Scanning dependencies of target xform2scalar make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make -f apps/CMakeFiles/xform2scalar.dir/build.make apps/CMakeFiles/xform2scalar.dir/build +make -f apps/CMakeFiles/asegment_sri24.dir/build.make apps/CMakeFiles/asegment_sri24.dir/build +make -f apps/CMakeFiles/warp.dir/build.make apps/CMakeFiles/warp.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[ 68%] Building CXX object apps/CMakeFiles/stream_pixels.dir/stream_pixels.cxx.o make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -Scanning dependencies of target asegment +make -f apps/CMakeFiles/volume_reconstruction.dir/build.make apps/CMakeFiles/volume_reconstruction.dir/build +[ 67%] Building CXX object apps/CMakeFiles/volume_injection.dir/volume_injection.cxx.o +[ 68%] Building CXX object apps/CMakeFiles/dbtool.dir/dbtool.cxx.o +[ 68%] Building CXX object apps/CMakeFiles/dcm2image.dir/dcm2image.cxx.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/volume_injection.dir/volume_injection.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/volume_injection.cxx +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/dbtool.dir/dbtool.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/dbtool.cxx +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/dcm2image.dir/dcm2image.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/dcm2image.cxx [ 69%] Building CXX object apps/CMakeFiles/detect_spheres_matched_filter.dir/detect_spheres_matched_filter.cxx.o -Scanning dependencies of target filter -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/stream_pixels.dir/stream_pixels.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/stream_pixels.cxx -make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make -f apps/CMakeFiles/asegment.dir/build.make apps/CMakeFiles/asegment.dir/build cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/detect_spheres_matched_filter.dir/detect_spheres_matched_filter.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/detect_spheres_matched_filter.cxx -make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make -f apps/CMakeFiles/filter.dir/build.make apps/CMakeFiles/filter.dir/build -[ 69%] Building CXX object apps/CMakeFiles/dcm2image.dir/dcm2image.cxx.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/dcm2image.dir/dcm2image.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/dcm2image.cxx -make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[ 70%] Building CXX object apps/CMakeFiles/volume_reconstruction.dir/volume_reconstruction.cxx.o make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[ 70%] Building CXX object apps/CMakeFiles/sympl.dir/sympl.cxx.o -[ 70%] Building CXX object apps/CMakeFiles/asegment_sri24.dir/asegment_sri24.cxx.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/sympl.dir/sympl.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/sympl.cxx -Scanning dependencies of target fit_spline_xform +[ 69%] Building CXX object apps/CMakeFiles/asegment_sri24.dir/asegment_sri24.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/asegment_sri24.dir/asegment_sri24.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/asegment_sri24.cxx +[ 70%] Building CXX object apps/CMakeFiles/volume_reconstruction.dir/volume_reconstruction.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/volume_reconstruction.dir/volume_reconstruction.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/volume_reconstruction.cxx -[ 70%] Building CXX object apps/CMakeFiles/volume_injection.dir/volume_injection.cxx.o -make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make -f apps/CMakeFiles/fit_spline_xform.dir/build.make apps/CMakeFiles/fit_spline_xform.dir/build -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/volume_injection.dir/volume_injection.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/volume_injection.cxx -[ 71%] Building CXX object apps/CMakeFiles/ttest.dir/ttest.cxx.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/ttest.dir/ttest.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/ttest.cxx -[ 71%] Building CXX object apps/CMakeFiles/unwarp_image_phantom.dir/unwarp_image_phantom.cxx.o -[ 71%] Building CXX object apps/CMakeFiles/warp.dir/warp.cxx.o -make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +[ 70%] Building CXX object apps/CMakeFiles/warp.dir/warp.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/warp.dir/warp.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/warp.cxx -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/unwarp_image_phantom.dir/unwarp_image_phantom.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/unwarp_image_phantom.cxx -[ 71%] Building CXX object apps/CMakeFiles/streamxform.dir/streamxform.cxx.o -[ 71%] Building CXX object apps/CMakeFiles/xform2scalar.dir/xform2scalar.cxx.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/streamxform.dir/streamxform.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/streamxform.cxx -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/xform2scalar.dir/xform2scalar.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/xform2scalar.cxx -[ 71%] Building CXX object apps/CMakeFiles/asegment.dir/asegment.cxx.o -[ 71%] Building CXX object apps/CMakeFiles/filter.dir/filter.cxx.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/asegment.dir/asegment.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/asegment.cxx -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/filter.dir/filter.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/filter.cxx -[ 71%] Building CXX object apps/CMakeFiles/fit_spline_xform.dir/fit_spline_xform.cxx.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/fit_spline_xform.dir/fit_spline_xform.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/fit_spline_xform.cxx -In file included from /build/cmtk-3.3.1p1+dfsg/apps/dbtool.cxx:33: -/build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] - 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); - | ^~~~~ In file included from /build/cmtk-3.3.1p1+dfsg/apps/volume_injection.cxx:35: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ -In file included from /build/cmtk-3.3.1p1+dfsg/apps/stream_pixels.cxx:35: -/build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] - 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); - | ^~~~~ -In file included from /build/cmtk-3.3.1p1+dfsg/apps/ttest.cxx:37: -/build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] - 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); - | ^~~~~ In file included from /build/cmtk-3.3.1p1+dfsg/apps/asegment_sri24.cxx:35: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ -In file included from /build/cmtk-3.3.1p1+dfsg/apps/detect_spheres_matched_filter.cxx:35: -/build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] - 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); - | ^~~~~ -In file included from /build/cmtk-3.3.1p1+dfsg/apps/xform2scalar.cxx:36: -/build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] - 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); - | ^~~~~ -In file included from /build/cmtk-3.3.1p1+dfsg/apps/sympl.cxx:35: -/build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] - 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); - | ^~~~~ In file included from /build/cmtk-3.3.1p1+dfsg/apps/volume_reconstruction.cxx:35: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ -In file included from /build/cmtk-3.3.1p1+dfsg/apps/unwarp_image_phantom.cxx:36: -/build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] - 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); - | ^~~~~ -In file included from /build/cmtk-3.3.1p1+dfsg/apps/streamxform.cxx:37: -/build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] - 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); - | ^~~~~ -In file included from /build/cmtk-3.3.1p1+dfsg/apps/fit_spline_xform.cxx:36: -/build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] - 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); - | ^~~~~ -In file included from /build/cmtk-3.3.1p1+dfsg/apps/asegment.cxx:35: -/build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] - 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); - | ^~~~~ -In file included from /build/cmtk-3.3.1p1+dfsg/apps/filter.cxx:36: +In file included from /build/cmtk-3.3.1p1+dfsg/apps/detect_spheres_matched_filter.cxx:35: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ -In file included from /build/cmtk-3.3.1p1+dfsg/apps/dcm2image.cxx:39: +In file included from /build/cmtk-3.3.1p1+dfsg/apps/dbtool.cxx:33: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ @@ -2781,6 +2708,10 @@ /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ +In file included from /build/cmtk-3.3.1p1+dfsg/apps/dcm2image.cxx:39: +/build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] + 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); + | ^~~~~ In file included from /build/cmtk-3.3.1p1+dfsg/apps/dcm2image.cxx:45: /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h:179:8: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] 179 | std::auto_ptr m_Dataset; @@ -2842,68 +2773,244 @@ /usr/include/c++/10/bits/unique_ptr.h:57:28: note: declared here 57 | template class auto_ptr; | ^~~~~~~~ -[ 72%] Linking CXX executable ../bin/warp +[ 71%] Linking CXX executable ../bin/warp cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/warp.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/warp.dir/warp.cxx.o -o ../bin/warp -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[ 72%] Built target warp +[ 71%] Built target warp +make -f apps/CMakeFiles/unwarp_image_phantom.dir/build.make apps/CMakeFiles/unwarp_image_phantom.dir/depend +make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/unwarp_image_phantom.dir/DependInfo.cmake --color= +Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/unwarp_image_phantom.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/unwarp_image_phantom.dir/depend.internal". +Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/unwarp_image_phantom.dir/depend.internal". +Scanning dependencies of target unwarp_image_phantom +make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +make -f apps/CMakeFiles/unwarp_image_phantom.dir/build.make apps/CMakeFiles/unwarp_image_phantom.dir/build +make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +[ 71%] Building CXX object apps/CMakeFiles/unwarp_image_phantom.dir/unwarp_image_phantom.cxx.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/unwarp_image_phantom.dir/unwarp_image_phantom.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/unwarp_image_phantom.cxx +[ 71%] Linking CXX executable ../bin/dbtool +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/dbtool.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/dbtool.dir/dbtool.cxx.o -o ../bin/dbtool -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so +[ 71%] Linking CXX executable ../bin/asegment_sri24 +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/asegment_sri24.dir/link.txt --verbose=1 +make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +[ 71%] Built target dbtool +[ 71%] Linking CXX executable ../bin/detect_spheres_matched_filter +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/detect_spheres_matched_filter.dir/link.txt --verbose=1 +make -f apps/CMakeFiles/ttest.dir/build.make apps/CMakeFiles/ttest.dir/depend +/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/asegment_sri24.dir/asegment_sri24.cxx.o -o ../bin/asegment_sri24 -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so +make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/ttest.dir/DependInfo.cmake --color= +/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/detect_spheres_matched_filter.dir/detect_spheres_matched_filter.cxx.o -o ../bin/detect_spheres_matched_filter -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so +Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/ttest.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/ttest.dir/depend.internal". +Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/ttest.dir/depend.internal". +In file included from /build/cmtk-3.3.1p1+dfsg/apps/unwarp_image_phantom.cxx:36: +/build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] + 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); + | ^~~~~ +Scanning dependencies of target ttest +make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +make -f apps/CMakeFiles/ttest.dir/build.make apps/CMakeFiles/ttest.dir/build +make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +[ 72%] Building CXX object apps/CMakeFiles/ttest.dir/ttest.cxx.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/ttest.dir/ttest.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/ttest.cxx +make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +[ 72%] Built target detect_spheres_matched_filter +make -f apps/CMakeFiles/sympl.dir/build.make apps/CMakeFiles/sympl.dir/depend +make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/sympl.dir/DependInfo.cmake --color= +make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/sympl.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/sympl.dir/depend.internal". +Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/sympl.dir/depend.internal". +[ 72%] Built target asegment_sri24 +make -f apps/CMakeFiles/streamxform.dir/build.make apps/CMakeFiles/streamxform.dir/depend +make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/streamxform.dir/DependInfo.cmake --color= +Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/streamxform.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/streamxform.dir/depend.internal". +Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/streamxform.dir/depend.internal". +Scanning dependencies of target streamxform +make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +make -f apps/CMakeFiles/streamxform.dir/build.make apps/CMakeFiles/streamxform.dir/build +make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +Scanning dependencies of target sympl +make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +make -f apps/CMakeFiles/sympl.dir/build.make apps/CMakeFiles/sympl.dir/build +make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +[ 72%] Building CXX object apps/CMakeFiles/streamxform.dir/streamxform.cxx.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/streamxform.dir/streamxform.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/streamxform.cxx +[ 72%] Building CXX object apps/CMakeFiles/sympl.dir/sympl.cxx.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/sympl.dir/sympl.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/sympl.cxx +In file included from /build/cmtk-3.3.1p1+dfsg/apps/ttest.cxx:37: +/build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] + 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); + | ^~~~~ +In file included from /build/cmtk-3.3.1p1+dfsg/apps/streamxform.cxx:37: +/build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] + 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); + | ^~~~~ +In file included from /build/cmtk-3.3.1p1+dfsg/apps/sympl.cxx:35: +/build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] + 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); + | ^~~~~ +[ 72%] Linking CXX executable ../bin/volume_injection +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/volume_injection.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/volume_injection.dir/volume_injection.cxx.o -o ../bin/volume_injection -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so +[ 72%] Linking CXX executable ../bin/dcm2image +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/dcm2image.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/dcm2image.dir/dcm2image.cxx.o -o ../bin/dcm2image -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so +make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +[ 72%] Built target volume_injection +make -f apps/CMakeFiles/stream_pixels.dir/build.make apps/CMakeFiles/stream_pixels.dir/depend +make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/stream_pixels.dir/DependInfo.cmake --color= +Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/stream_pixels.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/stream_pixels.dir/depend.internal". +Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/stream_pixels.dir/depend.internal". +make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +[ 72%] Built target dcm2image +make -f apps/CMakeFiles/xform2scalar.dir/build.make apps/CMakeFiles/xform2scalar.dir/depend +make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/xform2scalar.dir/DependInfo.cmake --color= +Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/xform2scalar.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/xform2scalar.dir/depend.internal". +Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/xform2scalar.dir/depend.internal". +Scanning dependencies of target stream_pixels +Scanning dependencies of target xform2scalar +make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +make -f apps/CMakeFiles/xform2scalar.dir/build.make apps/CMakeFiles/xform2scalar.dir/build +make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +make -f apps/CMakeFiles/stream_pixels.dir/build.make apps/CMakeFiles/stream_pixels.dir/build +make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +[ 72%] Building CXX object apps/CMakeFiles/xform2scalar.dir/xform2scalar.cxx.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/xform2scalar.dir/xform2scalar.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/xform2scalar.cxx +[ 72%] Building CXX object apps/CMakeFiles/stream_pixels.dir/stream_pixels.cxx.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/stream_pixels.dir/stream_pixels.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/stream_pixels.cxx +In file included from /build/cmtk-3.3.1p1+dfsg/apps/xform2scalar.cxx:36: +/build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] + 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); + | ^~~~~ +In file included from /build/cmtk-3.3.1p1+dfsg/apps/stream_pixels.cxx:35: +/build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] + 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); + | ^~~~~ +[ 74%] Linking CXX executable ../bin/ttest +[ 74%] Linking CXX executable ../bin/streamxform +[ 74%] Linking CXX executable ../bin/unwarp_image_phantom +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/ttest.dir/link.txt --verbose=1 +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/unwarp_image_phantom.dir/link.txt --verbose=1 +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/streamxform.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/streamxform.dir/streamxform.cxx.o -o ../bin/streamxform -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so +/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/ttest.dir/ttest.cxx.o -o ../bin/ttest -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so +/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/unwarp_image_phantom.dir/unwarp_image_phantom.cxx.o -o ../bin/unwarp_image_phantom -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so +make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +[ 74%] Built target ttest +make -f apps/CMakeFiles/filter.dir/build.make apps/CMakeFiles/filter.dir/depend +make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/filter.dir/DependInfo.cmake --color= +make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/filter.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/filter.dir/depend.internal". +Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/filter.dir/depend.internal". +[ 74%] Built target streamxform +make -f apps/CMakeFiles/asegment.dir/build.make apps/CMakeFiles/asegment.dir/depend +[ 74%] Built target unwarp_image_phantom +make -f apps/CMakeFiles/fit_spline_xform.dir/build.make apps/CMakeFiles/fit_spline_xform.dir/depend +make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/asegment.dir/DependInfo.cmake --color= +make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/fit_spline_xform.dir/DependInfo.cmake --color= +Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/asegment.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/asegment.dir/depend.internal". +Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/asegment.dir/depend.internal". +Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/fit_spline_xform.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/fit_spline_xform.dir/depend.internal". +Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/fit_spline_xform.dir/depend.internal". +Scanning dependencies of target filter +make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +make -f apps/CMakeFiles/filter.dir/build.make apps/CMakeFiles/filter.dir/build +Scanning dependencies of target asegment +Scanning dependencies of target fit_spline_xform +make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +make -f apps/CMakeFiles/asegment.dir/build.make apps/CMakeFiles/asegment.dir/build +make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +make -f apps/CMakeFiles/fit_spline_xform.dir/build.make apps/CMakeFiles/fit_spline_xform.dir/build +make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +[ 74%] Building CXX object apps/CMakeFiles/asegment.dir/asegment.cxx.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/asegment.dir/asegment.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/asegment.cxx +[ 74%] Building CXX object apps/CMakeFiles/filter.dir/filter.cxx.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/filter.dir/filter.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/filter.cxx +[ 74%] Building CXX object apps/CMakeFiles/fit_spline_xform.dir/fit_spline_xform.cxx.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/fit_spline_xform.dir/fit_spline_xform.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/fit_spline_xform.cxx +[ 74%] Linking CXX executable ../bin/volume_reconstruction +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/volume_reconstruction.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/volume_reconstruction.dir/volume_reconstruction.cxx.o -o ../bin/volume_reconstruction -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so +make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +In file included from /build/cmtk-3.3.1p1+dfsg/apps/fit_spline_xform.cxx:36: +/build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] + 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); + | ^~~~~ +[ 74%] Built target volume_reconstruction make -f apps/CMakeFiles/fit_affine_dfield.dir/build.make apps/CMakeFiles/fit_affine_dfield.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/fit_affine_dfield.dir/DependInfo.cmake --color= +In file included from /build/cmtk-3.3.1p1+dfsg/apps/asegment.cxx:35: +/build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] + 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); + | ^~~~~ Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/fit_affine_dfield.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/fit_affine_dfield.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/fit_affine_dfield.dir/depend.internal". Scanning dependencies of target fit_affine_dfield make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/fit_affine_dfield.dir/build.make apps/CMakeFiles/fit_affine_dfield.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[ 72%] Building CXX object apps/CMakeFiles/fit_affine_dfield.dir/fit_affine_dfield.cxx.o +[ 74%] Building CXX object apps/CMakeFiles/fit_affine_dfield.dir/fit_affine_dfield.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/fit_affine_dfield.dir/fit_affine_dfield.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/fit_affine_dfield.cxx -[ 72%] Linking CXX executable ../bin/dbtool -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/dbtool.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/dbtool.dir/dbtool.cxx.o -o ../bin/dbtool -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so +In file included from /build/cmtk-3.3.1p1+dfsg/apps/filter.cxx:36: +/build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] + 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); + | ^~~~~ +In file included from /build/cmtk-3.3.1p1+dfsg/apps/fit_affine_dfield.cxx:36: +/build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] + 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); + | ^~~~~ +[ 74%] Linking CXX executable ../bin/stream_pixels +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/stream_pixels.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/stream_pixels.dir/stream_pixels.cxx.o -o ../bin/stream_pixels -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[ 72%] Built target dbtool +[ 74%] Linking CXX executable ../bin/sympl +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/sympl.dir/link.txt --verbose=1 +[ 74%] Built target stream_pixels make -f apps/CMakeFiles/fibxform.dir/build.make apps/CMakeFiles/fibxform.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/fibxform.dir/DependInfo.cmake --color= +/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/sympl.dir/sympl.cxx.o -o ../bin/sympl -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/fibxform.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/fibxform.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/fibxform.dir/depend.internal". +[ 75%] Linking CXX executable ../bin/xform2scalar +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/xform2scalar.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/xform2scalar.dir/xform2scalar.cxx.o -o ../bin/xform2scalar -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so Scanning dependencies of target fibxform make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/fibxform.dir/build.make apps/CMakeFiles/fibxform.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[ 73%] Building CXX object apps/CMakeFiles/fibxform.dir/fibxform.cxx.o +[ 76%] Building CXX object apps/CMakeFiles/fibxform.dir/fibxform.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/fibxform.dir/fibxform.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/fibxform.cxx -In file included from /build/cmtk-3.3.1p1+dfsg/apps/fit_affine_dfield.cxx:36: -/build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] - 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); - | ^~~~~ -In file included from /build/cmtk-3.3.1p1+dfsg/apps/fibxform.cxx:35: -/build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] - 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); - | ^~~~~ -[ 73%] Linking CXX executable ../bin/asegment -[ 73%] Linking CXX executable ../bin/stream_pixels +[ 76%] Linking CXX executable ../bin/fit_affine_dfield +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/fit_affine_dfield.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/fit_affine_dfield.dir/fit_affine_dfield.cxx.o -o ../bin/fit_affine_dfield -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so +make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +[ 76%] Linking CXX executable ../bin/asegment cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/asegment.dir/link.txt --verbose=1 -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/stream_pixels.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/asegment.dir/asegment.cxx.o -o ../bin/asegment -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so -/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/stream_pixels.dir/stream_pixels.cxx.o -o ../bin/stream_pixels -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so +[ 76%] Built target xform2scalar make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[ 73%] Built target asegment make -f apps/CMakeFiles/groupwise_affine.dir/build.make apps/CMakeFiles/groupwise_affine.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/groupwise_affine.dir/DependInfo.cmake --color= +/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/asegment.dir/asegment.cxx.o -o ../bin/asegment -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so +[ 76%] Built target sympl +make -f apps/CMakeFiles/dwi_mask_bad_slices.dir/build.make apps/CMakeFiles/dwi_mask_bad_slices.dir/depend Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/groupwise_affine.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/groupwise_affine.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/groupwise_affine.dir/depend.internal". -Scanning dependencies of target groupwise_affine -make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make -f apps/CMakeFiles/groupwise_affine.dir/build.make apps/CMakeFiles/groupwise_affine.dir/build -make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[ 73%] Building CXX object apps/CMakeFiles/groupwise_affine.dir/groupwise_affine.cxx.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/groupwise_affine.dir/groupwise_affine.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/groupwise_affine.cxx -make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[ 73%] Built target stream_pixels -make -f apps/CMakeFiles/dwi_mask_bad_slices.dir/build.make apps/CMakeFiles/dwi_mask_bad_slices.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/dwi_mask_bad_slices.dir/DependInfo.cmake --color= Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/dwi_mask_bad_slices.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/dwi_mask_bad_slices.dir/depend.internal". @@ -2912,20 +3019,16 @@ make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/dwi_mask_bad_slices.dir/build.make apps/CMakeFiles/dwi_mask_bad_slices.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[ 73%] Building CXX object apps/CMakeFiles/dwi_mask_bad_slices.dir/dwi_mask_bad_slices.cxx.o +[ 76%] Building CXX object apps/CMakeFiles/dwi_mask_bad_slices.dir/dwi_mask_bad_slices.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/dwi_mask_bad_slices.dir/dwi_mask_bad_slices.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/dwi_mask_bad_slices.cxx -[ 73%] Linking CXX executable ../bin/detect_spheres_matched_filter -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/detect_spheres_matched_filter.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/detect_spheres_matched_filter.dir/detect_spheres_matched_filter.cxx.o -o ../bin/detect_spheres_matched_filter -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so -[ 73%] Linking CXX executable ../bin/asegment_sri24 -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/asegment_sri24.dir/link.txt --verbose=1 -In file included from /build/cmtk-3.3.1p1+dfsg/apps/groupwise_affine.cxx:39: -/build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] - 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); - | ^~~~~ -/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/asegment_sri24.dir/asegment_sri24.cxx.o -o ../bin/asegment_sri24 -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so +Scanning dependencies of target groupwise_affine +make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +make -f apps/CMakeFiles/groupwise_affine.dir/build.make apps/CMakeFiles/groupwise_affine.dir/build +make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +[ 76%] Building CXX object apps/CMakeFiles/groupwise_affine.dir/groupwise_affine.cxx.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/groupwise_affine.dir/groupwise_affine.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/groupwise_affine.cxx make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[ 73%] Built target detect_spheres_matched_filter +[ 76%] Built target fit_affine_dfield make -f apps/CMakeFiles/film.dir/build.make apps/CMakeFiles/film.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/film.dir/DependInfo.cmake --color= @@ -2935,10 +3038,10 @@ make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/film.dir/build.make apps/CMakeFiles/film.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[ 73%] Building CXX object apps/CMakeFiles/film.dir/film.cxx.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/film.dir/film.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/film.cxx make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[ 73%] Built target asegment_sri24 +[ 76%] Building CXX object apps/CMakeFiles/film.dir/film.cxx.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/film.dir/film.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/film.cxx +[ 76%] Built target asegment make -f apps/CMakeFiles/destripe.dir/build.make apps/CMakeFiles/destripe.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/destripe.dir/DependInfo.cmake --color= @@ -2948,20 +3051,33 @@ make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/destripe.dir/build.make apps/CMakeFiles/destripe.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[ 73%] Building CXX object apps/CMakeFiles/destripe.dir/destripe.cxx.o +[ 76%] Building CXX object apps/CMakeFiles/destripe.dir/destripe.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/destripe.dir/destripe.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/destripe.cxx -[ 74%] Linking CXX executable ../bin/filter -[ 74%] Linking CXX executable ../bin/fit_affine_dfield -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/filter.dir/link.txt --verbose=1 -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/fit_affine_dfield.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/filter.dir/filter.cxx.o -o ../bin/filter -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so -/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/fit_affine_dfield.dir/fit_affine_dfield.cxx.o -o ../bin/fit_affine_dfield -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so +In file included from /build/cmtk-3.3.1p1+dfsg/apps/groupwise_affine.cxx:39: +/build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] + 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); + | ^~~~~ +In file included from /build/cmtk-3.3.1p1+dfsg/apps/fibxform.cxx:35: +/build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] + 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); + | ^~~~~ In file included from /build/cmtk-3.3.1p1+dfsg/apps/dwi_mask_bad_slices.cxx:35: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ +In file included from /build/cmtk-3.3.1p1+dfsg/apps/destripe.cxx:33: +/build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] + 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); + | ^~~~~ +In file included from /build/cmtk-3.3.1p1+dfsg/apps/film.cxx:35: +/build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] + 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); + | ^~~~~ +[ 77%] Linking CXX executable ../bin/filter +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/filter.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/filter.dir/filter.cxx.o -o ../bin/filter -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[ 74%] Built target fit_affine_dfield +[ 77%] Built target filter make -f apps/CMakeFiles/mcaffine.dir/build.make apps/CMakeFiles/mcaffine.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/mcaffine.dir/DependInfo.cmake --color= @@ -2969,28 +3085,39 @@ Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/mcaffine.dir/depend.internal". Scanning dependencies of target mcaffine make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/mcaffine.dir/build.make apps/CMakeFiles/mcaffine.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[ 74%] Building CXX object apps/CMakeFiles/mcaffine.dir/mcaffine.cxx.o -[ 74%] Built target filter +[ 77%] Building CXX object apps/CMakeFiles/mcaffine.dir/mcaffine.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/mcaffine.dir/mcaffine.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/mcaffine.cxx +[ 77%] Linking CXX executable ../bin/fit_spline_xform +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/fit_spline_xform.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/fit_spline_xform.dir/fit_spline_xform.cxx.o -o ../bin/fit_spline_xform -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so +In file included from /build/cmtk-3.3.1p1+dfsg/apps/mcaffine.cxx:37: +/build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] + 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); + | ^~~~~ +make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +[ 77%] Built target fit_spline_xform make -f apps/CMakeFiles/sba.dir/build.make apps/CMakeFiles/sba.dir/depend -[ 75%] Linking CXX executable ../bin/xform2scalar -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/xform2scalar.dir/link.txt --verbose=1 make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/sba.dir/DependInfo.cmake --color= -/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/xform2scalar.dir/xform2scalar.cxx.o -o ../bin/xform2scalar -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/sba.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/sba.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/sba.dir/depend.internal". Scanning dependencies of target sba make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/sba.dir/build.make apps/CMakeFiles/sba.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[ 76%] Building CXX object apps/CMakeFiles/sba.dir/sba.cxx.o +[ 78%] Building CXX object apps/CMakeFiles/sba.dir/sba.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/sba.dir/sba.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/sba.cxx +In file included from /build/cmtk-3.3.1p1+dfsg/apps/sba.cxx:37: +/build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] + 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); + | ^~~~~ +[ 78%] Linking CXX executable ../bin/fibxform +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/fibxform.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/fibxform.dir/fibxform.cxx.o -o ../bin/fibxform -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[ 76%] Built target xform2scalar +[ 78%] Built target fibxform make -f apps/CMakeFiles/dof2mat.dir/build.make apps/CMakeFiles/dof2mat.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/dof2mat.dir/DependInfo.cmake --color= @@ -3000,30 +3127,17 @@ make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/dof2mat.dir/build.make apps/CMakeFiles/dof2mat.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[ 76%] Building CXX object apps/CMakeFiles/dof2mat.dir/dof2mat.cxx.o +[ 78%] Building CXX object apps/CMakeFiles/dof2mat.dir/dof2mat.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/dof2mat.dir/dof2mat.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/dof2mat.cxx -In file included from /build/cmtk-3.3.1p1+dfsg/apps/film.cxx:35: -/build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] - 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); - | ^~~~~ -[ 76%] Linking CXX executable ../bin/ttest -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/ttest.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/ttest.dir/ttest.cxx.o -o ../bin/ttest -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so -In file included from /build/cmtk-3.3.1p1+dfsg/apps/destripe.cxx:33: +In file included from /build/cmtk-3.3.1p1+dfsg/apps/dof2mat.cxx:36: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ -[ 76%] Linking CXX executable ../bin/fit_spline_xform -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/fit_spline_xform.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/fit_spline_xform.dir/fit_spline_xform.cxx.o -o ../bin/fit_spline_xform -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so -[ 77%] Linking CXX executable ../bin/streamxform -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/streamxform.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/streamxform.dir/streamxform.cxx.o -o ../bin/streamxform -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so -[ 77%] Linking CXX executable ../bin/volume_injection -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/volume_injection.dir/link.txt --verbose=1 +[ 78%] Linking CXX executable ../bin/destripe +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/destripe.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/destripe.dir/destripe.cxx.o -o ../bin/destripe -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/volume_injection.dir/volume_injection.cxx.o -o ../bin/volume_injection -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so -[ 77%] Built target ttest +[ 78%] Built target destripe make -f apps/CMakeFiles/histogram.dir/build.make apps/CMakeFiles/histogram.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/histogram.dir/DependInfo.cmake --color= @@ -3033,44 +3147,49 @@ make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/histogram.dir/build.make apps/CMakeFiles/histogram.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -In file included from /build/cmtk-3.3.1p1+dfsg/apps/sba.cxx:37: -/build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] - 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); - | ^~~~~ -[ 77%] Building CXX object apps/CMakeFiles/histogram.dir/histogram.cxx.o +[ 78%] Building CXX object apps/CMakeFiles/histogram.dir/histogram.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/histogram.dir/histogram.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/histogram.cxx -make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -In file included from /build/cmtk-3.3.1p1+dfsg/apps/mcaffine.cxx:37: +[ 78%] Linking CXX executable ../bin/dof2mat +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/dof2mat.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/dof2mat.dir/dof2mat.cxx.o -o ../bin/dof2mat -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so +[ 79%] Linking CXX executable ../bin/dwi_mask_bad_slices +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/dwi_mask_bad_slices.dir/link.txt --verbose=1 +In file included from /build/cmtk-3.3.1p1+dfsg/apps/histogram.cxx:37: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ +/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/dwi_mask_bad_slices.dir/dwi_mask_bad_slices.cxx.o -o ../bin/dwi_mask_bad_slices -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[ 77%] Built target streamxform +[ 79%] Built target dof2mat make -f apps/CMakeFiles/groupwise_init.dir/build.make apps/CMakeFiles/groupwise_init.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/groupwise_init.dir/DependInfo.cmake --color= -[ 77%] Built target fit_spline_xform +Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/groupwise_init.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/groupwise_init.dir/depend.internal". +Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/groupwise_init.dir/depend.internal". +make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +[ 79%] Built target dwi_mask_bad_slices make -f apps/CMakeFiles/mk_phantom_3d.dir/build.make apps/CMakeFiles/mk_phantom_3d.dir/depend +[ 79%] Linking CXX executable ../bin/sba make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/mk_phantom_3d.dir/DependInfo.cmake --color= -Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/groupwise_init.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/groupwise_init.dir/depend.internal". -Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/groupwise_init.dir/depend.internal". -Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/mk_phantom_3d.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/mk_phantom_3d.dir/depend.internal". -Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/mk_phantom_3d.dir/depend.internal". Scanning dependencies of target groupwise_init +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/sba.dir/link.txt --verbose=1 make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/groupwise_init.dir/build.make apps/CMakeFiles/groupwise_init.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +[ 80%] Building CXX object apps/CMakeFiles/groupwise_init.dir/groupwise_init.cxx.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/groupwise_init.dir/groupwise_init.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/groupwise_init.cxx +/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/sba.dir/sba.cxx.o -o ../bin/sba -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so +Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/mk_phantom_3d.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/mk_phantom_3d.dir/depend.internal". +Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/mk_phantom_3d.dir/depend.internal". Scanning dependencies of target mk_phantom_3d make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/mk_phantom_3d.dir/build.make apps/CMakeFiles/mk_phantom_3d.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[ 78%] Building CXX object apps/CMakeFiles/groupwise_init.dir/groupwise_init.cxx.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/groupwise_init.dir/groupwise_init.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/groupwise_init.cxx -[ 78%] Building CXX object apps/CMakeFiles/mk_phantom_3d.dir/mk_phantom_3d.cxx.o +[ 80%] Building CXX object apps/CMakeFiles/mk_phantom_3d.dir/mk_phantom_3d.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/mk_phantom_3d.dir/mk_phantom_3d.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/mk_phantom_3d.cxx make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[ 78%] Built target volume_injection +[ 80%] Built target sba make -f apps/CMakeFiles/glm.dir/build.make apps/CMakeFiles/glm.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/glm.dir/DependInfo.cmake --color= @@ -3080,17 +3199,29 @@ make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/glm.dir/build.make apps/CMakeFiles/glm.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[ 78%] Building CXX object apps/CMakeFiles/glm.dir/glm.cxx.o +[ 80%] Building CXX object apps/CMakeFiles/glm.dir/glm.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/glm.dir/glm.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/glm.cxx -In file included from /build/cmtk-3.3.1p1+dfsg/apps/dof2mat.cxx:36: -/build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] - 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); - | ^~~~~ -In file included from /build/cmtk-3.3.1p1+dfsg/apps/histogram.cxx:37: +[ 80%] Linking CXX executable ../bin/groupwise_affine +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/groupwise_affine.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/groupwise_affine.dir/groupwise_affine.cxx.o -o ../bin/groupwise_affine -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so +make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +[ 80%] Built target groupwise_affine +make -f apps/CMakeFiles/avg_adm.dir/build.make apps/CMakeFiles/avg_adm.dir/depend +make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/avg_adm.dir/DependInfo.cmake --color= +Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/avg_adm.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/avg_adm.dir/depend.internal". +Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/avg_adm.dir/depend.internal". +In file included from /build/cmtk-3.3.1p1+dfsg/apps/groupwise_init.cxx:39: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ -In file included from /build/cmtk-3.3.1p1+dfsg/apps/groupwise_init.cxx:39: +Scanning dependencies of target avg_adm +make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +make -f apps/CMakeFiles/avg_adm.dir/build.make apps/CMakeFiles/avg_adm.dir/build +make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +[ 80%] Building CXX object apps/CMakeFiles/avg_adm.dir/avg_adm.cxx.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/avg_adm.dir/avg_adm.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/avg_adm.cxx +In file included from /build/cmtk-3.3.1p1+dfsg/apps/glm.cxx:37: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ @@ -3098,29 +3229,10 @@ /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ -In file included from /build/cmtk-3.3.1p1+dfsg/apps/glm.cxx:37: +In file included from /build/cmtk-3.3.1p1+dfsg/apps/avg_adm.cxx:35: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ -[ 79%] Linking CXX executable ../bin/unwarp_image_phantom -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/unwarp_image_phantom.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/unwarp_image_phantom.dir/unwarp_image_phantom.cxx.o -o ../bin/unwarp_image_phantom -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so -make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[ 79%] Built target unwarp_image_phantom -make -f apps/CMakeFiles/avg_adm.dir/build.make apps/CMakeFiles/avg_adm.dir/depend -make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/avg_adm.dir/DependInfo.cmake --color= -Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/avg_adm.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/avg_adm.dir/depend.internal". -Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/avg_adm.dir/depend.internal". -Scanning dependencies of target avg_adm -make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make -f apps/CMakeFiles/avg_adm.dir/build.make apps/CMakeFiles/avg_adm.dir/build -make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[ 79%] Building CXX object apps/CMakeFiles/avg_adm.dir/avg_adm.cxx.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/avg_adm.dir/avg_adm.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/avg_adm.cxx -[ 79%] Linking CXX executable ../bin/fibxform -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/fibxform.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/fibxform.dir/fibxform.cxx.o -o ../bin/fibxform -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so /build/cmtk-3.3.1p1+dfsg/apps/mk_phantom_3d.cxx: In function 'int doMain(int, const char**)': /build/cmtk-3.3.1p1+dfsg/apps/mk_phantom_3d.cxx:192:7: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] 192 | std::auto_ptr fileformat( new DcmFileFormat ); @@ -3130,128 +3242,131 @@ /usr/include/c++/10/bits/unique_ptr.h:57:28: note: declared here 57 | template class auto_ptr; | ^~~~~~~~ -[ 79%] Linking CXX executable ../bin/dof2mat -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/dof2mat.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/dof2mat.dir/dof2mat.cxx.o -o ../bin/dof2mat -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so +[ 80%] Linking CXX executable ../bin/film +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/film.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/film.dir/film.cxx.o -o ../bin/film -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so +[ 80%] Linking CXX executable ../bin/histogram +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/histogram.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/histogram.dir/histogram.cxx.o -o ../bin/histogram -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so +make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[ 79%] Built target fibxform +[ 80%] Built target film make -f apps/CMakeFiles/lsba.dir/build.make apps/CMakeFiles/lsba.dir/depend +[ 80%] Built target histogram +make -f apps/CMakeFiles/pxsearch.dir/build.make apps/CMakeFiles/pxsearch.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/lsba.dir/DependInfo.cmake --color= -Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/lsba.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/lsba.dir/depend.internal". -Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/lsba.dir/depend.internal". -Scanning dependencies of target lsba -make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make -f apps/CMakeFiles/lsba.dir/build.make apps/CMakeFiles/lsba.dir/build -make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[ 79%] Building CXX object apps/CMakeFiles/lsba.dir/lsba.cxx.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/lsba.dir/lsba.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/lsba.cxx -make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[ 79%] Built target dof2mat -make -f apps/CMakeFiles/pxsearch.dir/build.make apps/CMakeFiles/pxsearch.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/pxsearch.dir/DependInfo.cmake --color= Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/pxsearch.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/pxsearch.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/pxsearch.dir/depend.internal". +Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/lsba.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/lsba.dir/depend.internal". +Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/lsba.dir/depend.internal". +Scanning dependencies of target lsba Scanning dependencies of target pxsearch make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/pxsearch.dir/build.make apps/CMakeFiles/pxsearch.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[ 79%] Building CXX object apps/CMakeFiles/pxsearch.dir/pxsearch.cxx.o +make -f apps/CMakeFiles/lsba.dir/build.make apps/CMakeFiles/lsba.dir/build +make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +[ 80%] Building CXX object apps/CMakeFiles/pxsearch.dir/pxsearch.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/pxsearch.dir/pxsearch.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/pxsearch.cxx -In file included from /build/cmtk-3.3.1p1+dfsg/apps/avg_adm.cxx:35: +[ 80%] Building CXX object apps/CMakeFiles/lsba.dir/lsba.cxx.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/lsba.dir/lsba.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/lsba.cxx +In file included from /build/cmtk-3.3.1p1+dfsg/apps/pxsearch.cxx:37: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ -[ 79%] Linking CXX executable ../bin/sympl -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/sympl.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/sympl.dir/sympl.cxx.o -o ../bin/sympl -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so In file included from /build/cmtk-3.3.1p1+dfsg/apps/lsba.cxx:35: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ -In file included from /build/cmtk-3.3.1p1+dfsg/apps/pxsearch.cxx:37: -/build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] - 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); - | ^~~~~ -[ 79%] Linking CXX executable ../bin/dcm2image -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/dcm2image.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/dcm2image.dir/dcm2image.cxx.o -o ../bin/dcm2image -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so +[ 80%] Linking CXX executable ../bin/mcaffine +[ 80%] Linking CXX executable ../bin/glm +[ 80%] Linking CXX executable ../bin/groupwise_init +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/mcaffine.dir/link.txt --verbose=1 +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/glm.dir/link.txt --verbose=1 +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/groupwise_init.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/mcaffine.dir/mcaffine.cxx.o -o ../bin/mcaffine -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so +/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/groupwise_init.dir/groupwise_init.cxx.o -o ../bin/groupwise_init -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so +/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/glm.dir/glm.cxx.o -o ../bin/glm -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so +[ 80%] Linking CXX executable ../bin/mk_phantom_3d +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/mk_phantom_3d.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/mk_phantom_3d.dir/mk_phantom_3d.cxx.o -o ../bin/mk_phantom_3d -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so +make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[ 79%] Built target sympl +make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +[ 80%] Built target groupwise_init make -f apps/CMakeFiles/split.dir/build.make apps/CMakeFiles/split.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/split.dir/DependInfo.cmake --color= -Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/split.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/split.dir/depend.internal". -Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/split.dir/depend.internal". -Scanning dependencies of target split -make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make -f apps/CMakeFiles/split.dir/build.make apps/CMakeFiles/split.dir/build -make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[ 79%] Building CXX object apps/CMakeFiles/split.dir/split.cxx.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/split.dir/split.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/split.cxx -make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[ 79%] Built target dcm2image +[ 80%] Built target mk_phantom_3d make -f apps/CMakeFiles/gmm.dir/build.make apps/CMakeFiles/gmm.dir/depend +[ 80%] Built target glm +make -f apps/CMakeFiles/vtkxform.dir/build.make apps/CMakeFiles/vtkxform.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/gmm.dir/DependInfo.cmake --color= +make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/vtkxform.dir/DependInfo.cmake --color= +make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/vtkxform.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/vtkxform.dir/depend.internal". +Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/vtkxform.dir/depend.internal". +Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/split.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/split.dir/depend.internal". +Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/split.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/gmm.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/gmm.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/gmm.dir/depend.internal". +[ 80%] Built target mcaffine +make -f apps/CMakeFiles/fit_affine_xform.dir/build.make apps/CMakeFiles/fit_affine_xform.dir/depend +make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/fit_affine_xform.dir/DependInfo.cmake --color= +Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/fit_affine_xform.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/fit_affine_xform.dir/depend.internal". +Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/fit_affine_xform.dir/depend.internal". +Scanning dependencies of target vtkxform +make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' Scanning dependencies of target gmm +make -f apps/CMakeFiles/vtkxform.dir/build.make apps/CMakeFiles/vtkxform.dir/build make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +Scanning dependencies of target split make -f apps/CMakeFiles/gmm.dir/build.make apps/CMakeFiles/gmm.dir/build +make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +Scanning dependencies of target fit_affine_xform +make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +make -f apps/CMakeFiles/split.dir/build.make apps/CMakeFiles/split.dir/build +make -f apps/CMakeFiles/fit_affine_xform.dir/build.make apps/CMakeFiles/fit_affine_xform.dir/build +make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[ 79%] Building CXX object apps/CMakeFiles/gmm.dir/gmm.cxx.o +[ 80%] Building CXX object apps/CMakeFiles/vtkxform.dir/vtkxform.cxx.o +[ 80%] Building CXX object apps/CMakeFiles/gmm.dir/gmm.cxx.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/vtkxform.dir/vtkxform.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/vtkxform.cxx cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/gmm.dir/gmm.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/gmm.cxx -[ 80%] Linking CXX executable ../bin/dwi_mask_bad_slices -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/dwi_mask_bad_slices.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/dwi_mask_bad_slices.dir/dwi_mask_bad_slices.cxx.o -o ../bin/dwi_mask_bad_slices -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so -In file included from /build/cmtk-3.3.1p1+dfsg/apps/split.cxx:35: +[ 80%] Building CXX object apps/CMakeFiles/fit_affine_xform.dir/fit_affine_xform.cxx.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/fit_affine_xform.dir/fit_affine_xform.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/fit_affine_xform.cxx +[ 80%] Building CXX object apps/CMakeFiles/split.dir/split.cxx.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/split.dir/split.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/split.cxx +In file included from /build/cmtk-3.3.1p1+dfsg/apps/fit_affine_xform.cxx:36: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ -make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[ 80%] Built target dwi_mask_bad_slices -make -f apps/CMakeFiles/vtkxform.dir/build.make apps/CMakeFiles/vtkxform.dir/depend -make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/vtkxform.dir/DependInfo.cmake --color= -Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/vtkxform.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/vtkxform.dir/depend.internal". -Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/vtkxform.dir/depend.internal". +[ 80%] Linking CXX executable ../bin/avg_adm +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/avg_adm.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/avg_adm.dir/avg_adm.cxx.o -o ../bin/avg_adm -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so In file included from /build/cmtk-3.3.1p1+dfsg/apps/gmm.cxx:35: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ -Scanning dependencies of target vtkxform -make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make -f apps/CMakeFiles/vtkxform.dir/build.make apps/CMakeFiles/vtkxform.dir/build -make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[ 80%] Building CXX object apps/CMakeFiles/vtkxform.dir/vtkxform.cxx.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/vtkxform.dir/vtkxform.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/vtkxform.cxx -[ 80%] Linking CXX executable ../bin/sba -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/sba.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/sba.dir/sba.cxx.o -o ../bin/sba -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so +In file included from /build/cmtk-3.3.1p1+dfsg/apps/split.cxx:35: +/build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] + 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); + | ^~~~~ In file included from /build/cmtk-3.3.1p1+dfsg/apps/vtkxform.cxx:35: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ -[ 80%] Linking CXX executable ../bin/destripe -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/destripe.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/destripe.dir/destripe.cxx.o -o ../bin/destripe -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[ 80%] Built target sba -make -f apps/CMakeFiles/fit_affine_xform.dir/build.make apps/CMakeFiles/fit_affine_xform.dir/depend -make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/fit_affine_xform.dir/DependInfo.cmake --color= -Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/fit_affine_xform.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/fit_affine_xform.dir/depend.internal". -Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/fit_affine_xform.dir/depend.internal". -Scanning dependencies of target fit_affine_xform -make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make -f apps/CMakeFiles/fit_affine_xform.dir/build.make apps/CMakeFiles/fit_affine_xform.dir/build -make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[ 80%] Building CXX object apps/CMakeFiles/fit_affine_xform.dir/fit_affine_xform.cxx.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/fit_affine_xform.dir/fit_affine_xform.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/fit_affine_xform.cxx -make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[ 80%] Built target destripe +[ 80%] Built target avg_adm make -f apps/CMakeFiles/detect_adni_phantom.dir/build.make apps/CMakeFiles/detect_adni_phantom.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/detect_adni_phantom.dir/DependInfo.cmake --color= @@ -3269,11 +3384,11 @@ | ^ /build/cmtk-3.3.1p1+dfsg/apps/vtkxform.cxx:190:47: warning: narrowing conversion of 'xyz.cmtk::FixedVector<3, double>::.cmtk::FixedArray<3, double>::operator[](1)' from 'double' to 'float' [-Wnarrowing] /build/cmtk-3.3.1p1+dfsg/apps/vtkxform.cxx:190:47: warning: narrowing conversion of 'xyz.cmtk::FixedVector<3, double>::.cmtk::FixedArray<3, double>::operator[](2)' from 'double' to 'float' [-Wnarrowing] -[ 80%] Linking CXX executable ../bin/mk_phantom_3d -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/mk_phantom_3d.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/mk_phantom_3d.dir/mk_phantom_3d.cxx.o -o ../bin/mk_phantom_3d -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so +[ 80%] Linking CXX executable ../bin/pxsearch +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/pxsearch.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/pxsearch.dir/pxsearch.cxx.o -o ../bin/pxsearch -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[ 80%] Built target mk_phantom_3d +[ 80%] Built target pxsearch make -f apps/CMakeFiles/average_images.dir/build.make apps/CMakeFiles/average_images.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/average_images.dir/DependInfo.cmake --color= @@ -3284,20 +3399,20 @@ make -f apps/CMakeFiles/average_images.dir/build.make apps/CMakeFiles/average_images.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 80%] Building CXX object apps/CMakeFiles/average_images.dir/average_images.cxx.o -In file included from /build/cmtk-3.3.1p1+dfsg/apps/fit_affine_xform.cxx:36: +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/average_images.dir/average_images.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/average_images.cxx +[ 80%] Linking CXX executable ../bin/lsba +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/lsba.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/lsba.dir/lsba.cxx.o -o ../bin/lsba -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so +In file included from /build/cmtk-3.3.1p1+dfsg/apps/detect_adni_phantom.cxx:36: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/average_images.dir/average_images.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/average_images.cxx -[ 80%] Linking CXX executable ../bin/groupwise_init -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/groupwise_init.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/groupwise_init.dir/groupwise_init.cxx.o -o ../bin/groupwise_init -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so -In file included from /build/cmtk-3.3.1p1+dfsg/apps/detect_adni_phantom.cxx:36: +In file included from /build/cmtk-3.3.1p1+dfsg/apps/average_images.cxx:35: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[ 80%] Built target groupwise_init +[ 80%] Built target lsba make -f apps/CMakeFiles/geomatch.dir/build.make apps/CMakeFiles/geomatch.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/geomatch.dir/DependInfo.cmake --color= @@ -3309,156 +3424,156 @@ make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 81%] Building CXX object apps/CMakeFiles/geomatch.dir/geomatch.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/geomatch.dir/geomatch.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/geomatch.cxx -[ 81%] Linking CXX executable ../bin/pxsearch -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/pxsearch.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/pxsearch.dir/pxsearch.cxx.o -o ../bin/pxsearch -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so -In file included from /build/cmtk-3.3.1p1+dfsg/apps/average_images.cxx:35: +In file included from /build/cmtk-3.3.1p1+dfsg/apps/geomatch.cxx:35: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ +[ 81%] Linking CXX executable ../bin/vtkxform +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/vtkxform.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/vtkxform.dir/vtkxform.cxx.o -o ../bin/vtkxform -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so +[ 81%] Linking CXX executable ../bin/fit_affine_xform +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/fit_affine_xform.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/fit_affine_xform.dir/fit_affine_xform.cxx.o -o ../bin/fit_affine_xform -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[ 81%] Built target pxsearch +[ 81%] Built target vtkxform make -f apps/CMakeFiles/vol2csv.dir/build.make apps/CMakeFiles/vol2csv.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/vol2csv.dir/DependInfo.cmake --color= Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/vol2csv.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/vol2csv.dir/depend.internal". 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Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/imagemath.dir/depend.internal". +[ 81%] Building CXX object apps/CMakeFiles/vol2csv.dir/vol2csv.cxx.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/vol2csv.dir/vol2csv.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/vol2csv.cxx Scanning dependencies of target imagemath make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/imagemath.dir/build.make apps/CMakeFiles/imagemath.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 81%] Building CXX object apps/CMakeFiles/imagemath.dir/imagemath.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/imagemath.dir/imagemath.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/imagemath.cxx -make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[ 81%] Built target glm -make -f apps/CMakeFiles/groupwise_warp.dir/build.make apps/CMakeFiles/groupwise_warp.dir/depend -make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/groupwise_warp.dir/DependInfo.cmake --color= -Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/groupwise_warp.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/groupwise_warp.dir/depend.internal". -Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/groupwise_warp.dir/depend.internal". -Scanning dependencies of target groupwise_warp -make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make -f apps/CMakeFiles/groupwise_warp.dir/build.make apps/CMakeFiles/groupwise_warp.dir/build -make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[ 81%] Linking CXX executable ../bin/lsba -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/lsba.dir/link.txt --verbose=1 -[ 81%] Building CXX object apps/CMakeFiles/groupwise_warp.dir/groupwise_warp.cxx.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/groupwise_warp.dir/groupwise_warp.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/groupwise_warp.cxx -/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/lsba.dir/lsba.cxx.o -o ../bin/lsba -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so -[ 81%] Linking CXX executable ../bin/groupwise_affine -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/groupwise_affine.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/groupwise_affine.dir/groupwise_affine.cxx.o -o ../bin/groupwise_affine -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so -make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +[ 81%] Linking CXX executable ../bin/split +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/split.dir/link.txt --verbose=1 +[ 81%] Linking CXX executable ../bin/detect_adni_phantom +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/detect_adni_phantom.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/split.dir/split.cxx.o -o ../bin/split -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so +/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/detect_adni_phantom.dir/detect_adni_phantom.cxx.o -o ../bin/detect_adni_phantom -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so +[ 82%] Linking CXX executable ../bin/gmm +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/gmm.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/gmm.dir/gmm.cxx.o -o ../bin/gmm -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so +In file included from /build/cmtk-3.3.1p1+dfsg/apps/imagemath.cxx:35: +/build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] + 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); + | ^~~~~ In file included from /build/cmtk-3.3.1p1+dfsg/apps/vol2csv.cxx:35: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ -[ 81%] Linking CXX executable ../bin/volume_reconstruction -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/volume_reconstruction.dir/link.txt --verbose=1 -[ 81%] Built target lsba +make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +[ 82%] Built target gmm +make -f apps/CMakeFiles/groupwise_warp.dir/build.make apps/CMakeFiles/groupwise_warp.dir/depend +[ 82%] Built target detect_adni_phantom +make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/groupwise_warp.dir/DependInfo.cmake --color= make -f apps/CMakeFiles/lvote.dir/build.make apps/CMakeFiles/lvote.dir/depend +[ 82%] Built target split +make -f apps/CMakeFiles/convertx.dir/build.make apps/CMakeFiles/convertx.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/lvote.dir/DependInfo.cmake --color= -/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/volume_reconstruction.dir/volume_reconstruction.cxx.o -o ../bin/volume_reconstruction -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so +make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/convertx.dir/DependInfo.cmake --color= +Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/groupwise_warp.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/groupwise_warp.dir/depend.internal". +Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/groupwise_warp.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/lvote.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/lvote.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/lvote.dir/depend.internal". +Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/convertx.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/convertx.dir/depend.internal". +Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/convertx.dir/depend.internal". Scanning dependencies of target lvote make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/lvote.dir/build.make apps/CMakeFiles/lvote.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[ 82%] Building CXX object apps/CMakeFiles/lvote.dir/lvote.cxx.o +[ 83%] Building CXX object apps/CMakeFiles/lvote.dir/lvote.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/lvote.dir/lvote.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/lvote.cxx -make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[ 82%] Built target groupwise_affine -make -f apps/CMakeFiles/convertx.dir/build.make apps/CMakeFiles/convertx.dir/depend -make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/convertx.dir/DependInfo.cmake --color= -Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/convertx.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/convertx.dir/depend.internal". -Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/convertx.dir/depend.internal". Scanning dependencies of target convertx make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/convertx.dir/build.make apps/CMakeFiles/convertx.dir/build -make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[ 82%] Building CXX object apps/CMakeFiles/convertx.dir/convertx.cxx.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/convertx.dir/convertx.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/convertx.cxx -In file included from /build/cmtk-3.3.1p1+dfsg/apps/imagemath.cxx:35: -/build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] - 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); - | ^~~~~ +Scanning dependencies of target groupwise_warp make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[ 82%] Built target volume_reconstruction -make -f apps/CMakeFiles/symplx.dir/build.make apps/CMakeFiles/symplx.dir/depend +make -f apps/CMakeFiles/groupwise_warp.dir/build.make apps/CMakeFiles/groupwise_warp.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/symplx.dir/DependInfo.cmake --color= -Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/symplx.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/symplx.dir/depend.internal". -Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/symplx.dir/depend.internal". -Scanning dependencies of target symplx -make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make -f apps/CMakeFiles/symplx.dir/build.make apps/CMakeFiles/symplx.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[ 82%] Building CXX object apps/CMakeFiles/symplx.dir/symplx.cxx.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/symplx.dir/symplx.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/symplx.cxx +[ 83%] Building CXX object apps/CMakeFiles/convertx.dir/convertx.cxx.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/convertx.dir/convertx.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/convertx.cxx +[ 83%] Building CXX object apps/CMakeFiles/groupwise_warp.dir/groupwise_warp.cxx.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/groupwise_warp.dir/groupwise_warp.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/groupwise_warp.cxx In file included from /build/cmtk-3.3.1p1+dfsg/apps/groupwise_warp.cxx:39: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ -In file included from /build/cmtk-3.3.1p1+dfsg/apps/lvote.cxx:35: -/build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] - 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); - | ^~~~~ In file included from /build/cmtk-3.3.1p1+dfsg/apps/convertx.cxx:35: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ -[ 82%] Linking CXX executable ../bin/vtkxform -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/vtkxform.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/vtkxform.dir/vtkxform.cxx.o -o ../bin/vtkxform -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so -[ 82%] Linking CXX executable ../bin/split -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/split.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/split.dir/split.cxx.o -o ../bin/split -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so -In file included from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImageSymmetryPlaneCommandLineBase.h:43, - from /build/cmtk-3.3.1p1+dfsg/apps/symplx.cxx:35: +[ 83%] Linking CXX executable ../bin/average_images +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/average_images.dir/link.txt --verbose=1 +In file included from /build/cmtk-3.3.1p1+dfsg/apps/lvote.cxx:35: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ +/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/average_images.dir/average_images.cxx.o -o ../bin/average_images -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so +[ 83%] Linking CXX executable ../bin/geomatch +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/geomatch.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/geomatch.dir/geomatch.cxx.o -o ../bin/geomatch -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so +make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[ 82%] Built target vtkxform +[ 83%] Built target average_images +make -f apps/CMakeFiles/symplx.dir/build.make apps/CMakeFiles/symplx.dir/depend +[ 83%] Built target geomatch make -f apps/CMakeFiles/average_affine.dir/build.make apps/CMakeFiles/average_affine.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/symplx.dir/DependInfo.cmake --color= +make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/average_affine.dir/DependInfo.cmake --color= +Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/symplx.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/symplx.dir/depend.internal". +Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/symplx.dir/depend.internal". +Scanning dependencies of target symplx +make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +make -f apps/CMakeFiles/symplx.dir/build.make apps/CMakeFiles/symplx.dir/build +make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/average_affine.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/average_affine.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/average_affine.dir/depend.internal". Scanning dependencies of target average_affine make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/average_affine.dir/build.make apps/CMakeFiles/average_affine.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[ 83%] Building CXX object apps/CMakeFiles/average_affine.dir/average_affine.cxx.o +[ 83%] Building CXX object apps/CMakeFiles/symplx.dir/symplx.cxx.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/symplx.dir/symplx.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/symplx.cxx +[ 84%] Building CXX object apps/CMakeFiles/average_affine.dir/average_affine.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/average_affine.dir/average_affine.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/average_affine.cxx +In file included from /build/cmtk-3.3.1p1+dfsg/apps/average_affine.cxx:36: +/build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] + 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); + | ^~~~~ +In file included from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImageSymmetryPlaneCommandLineBase.h:43, + from /build/cmtk-3.3.1p1+dfsg/apps/symplx.cxx:35: +/build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] + 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); + | ^~~~~ +[ 84%] Linking CXX executable ../bin/symplx +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/symplx.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/symplx.dir/symplx.cxx.o -o ../bin/symplx -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[ 83%] Built target split +[ 84%] Built target symplx make -f apps/CMakeFiles/mcwarp.dir/build.make apps/CMakeFiles/mcwarp.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/mcwarp.dir/DependInfo.cmake --color= @@ -3468,26 +3583,17 @@ make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/mcwarp.dir/build.make apps/CMakeFiles/mcwarp.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[ 83%] Building CXX object apps/CMakeFiles/mcwarp.dir/mcwarp.cxx.o +[ 84%] Building CXX object apps/CMakeFiles/mcwarp.dir/mcwarp.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/mcwarp.dir/mcwarp.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/mcwarp.cxx -[ 84%] Linking CXX executable ../bin/gmm -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/gmm.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/gmm.dir/gmm.cxx.o -o ../bin/gmm -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so -[ 84%] Linking CXX executable ../bin/symplx -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/symplx.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/symplx.dir/symplx.cxx.o -o ../bin/symplx -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so -[ 84%] Linking CXX executable ../bin/fit_affine_xform -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/fit_affine_xform.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/fit_affine_xform.dir/fit_affine_xform.cxx.o -o ../bin/fit_affine_xform -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so -[ 84%] Linking CXX executable ../bin/avg_adm -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/avg_adm.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/avg_adm.dir/avg_adm.cxx.o -o ../bin/avg_adm -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so +[ 84%] Linking CXX executable ../bin/vol2csv +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/vol2csv.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/vol2csv.dir/vol2csv.cxx.o -o ../bin/vol2csv -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so In file included from /build/cmtk-3.3.1p1+dfsg/apps/mcwarp.cxx:37: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[ 84%] Built target gmm +[ 84%] Built target vol2csv make -f apps/CMakeFiles/average_labels.dir/build.make apps/CMakeFiles/average_labels.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/average_labels.dir/DependInfo.cmake --color= @@ -3499,117 +3605,142 @@ make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 84%] Building CXX object apps/CMakeFiles/average_labels.dir/average_labels.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/average_labels.dir/average_labels.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/average_labels.cxx -In file included from /build/cmtk-3.3.1p1+dfsg/apps/average_affine.cxx:36: -/build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] - 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); - | ^~~~~ +[ 84%] Linking CXX executable ../bin/average_affine +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/average_affine.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/average_affine.dir/average_affine.cxx.o -o ../bin/average_affine -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so +[ 84%] Linking CXX executable ../bin/lvote +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/lvote.dir/link.txt --verbose=1 make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[ 84%] Built target symplx +/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/lvote.dir/lvote.cxx.o -o ../bin/lvote -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so +[ 84%] Built target average_affine make -f apps/CMakeFiles/convert_warp.dir/build.make apps/CMakeFiles/convert_warp.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/convert_warp.dir/DependInfo.cmake --color= Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/convert_warp.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/convert_warp.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/convert_warp.dir/depend.internal". -make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' Scanning dependencies of target convert_warp -[ 84%] Built target fit_affine_xform make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/convert_warp.dir/build.make apps/CMakeFiles/convert_warp.dir/build +make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +[ 84%] Building CXX object apps/CMakeFiles/convert_warp.dir/convert_warp.cxx.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/convert_warp.dir/convert_warp.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/convert_warp.cxx +make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +[ 84%] Built target lvote make -f apps/CMakeFiles/make_initial_affine.dir/build.make apps/CMakeFiles/make_initial_affine.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/make_initial_affine.dir/DependInfo.cmake --color= -make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[ 84%] Building CXX object apps/CMakeFiles/convert_warp.dir/convert_warp.cxx.o Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/make_initial_affine.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/make_initial_affine.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/make_initial_affine.dir/depend.internal". -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/convert_warp.dir/convert_warp.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/convert_warp.cxx -make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' Scanning dependencies of target make_initial_affine make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/make_initial_affine.dir/build.make apps/CMakeFiles/make_initial_affine.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[ 84%] Built target avg_adm +In file included from /build/cmtk-3.3.1p1+dfsg/apps/average_labels.cxx:37: +/build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] + 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); + | ^~~~~ +[ 84%] Building CXX object apps/CMakeFiles/make_initial_affine.dir/make_initial_affine.cxx.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/make_initial_affine.dir/make_initial_affine.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/make_initial_affine.cxx +In file included from /build/cmtk-3.3.1p1+dfsg/apps/convert_warp.cxx:35: +/build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] + 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); + | ^~~~~ +In file included from /build/cmtk-3.3.1p1+dfsg/apps/make_initial_affine.cxx:36: +/build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] + 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); + | ^~~~~ +[ 84%] Linking CXX executable ../bin/imagemath +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/imagemath.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/imagemath.dir/imagemath.cxx.o -o ../bin/imagemath -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so +[ 84%] Linking CXX executable ../bin/convert_warp +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/convert_warp.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/convert_warp.dir/convert_warp.cxx.o -o ../bin/convert_warp -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so +[ 85%] Linking CXX executable ../bin/average_labels +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/average_labels.dir/link.txt --verbose=1 +make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/average_labels.dir/average_labels.cxx.o -o ../bin/average_labels -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so +[ 85%] Built target imagemath make -f apps/CMakeFiles/hausdorff.dir/build.make apps/CMakeFiles/hausdorff.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/hausdorff.dir/DependInfo.cmake --color= -[ 84%] Building CXX object apps/CMakeFiles/make_initial_affine.dir/make_initial_affine.cxx.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/make_initial_affine.dir/make_initial_affine.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/make_initial_affine.cxx -[ 84%] Linking CXX executable ../bin/geomatch -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/geomatch.dir/link.txt --verbose=1 Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/hausdorff.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/hausdorff.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/hausdorff.dir/depend.internal". -/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/geomatch.dir/geomatch.cxx.o -o ../bin/geomatch -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so Scanning dependencies of target hausdorff make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/hausdorff.dir/build.make apps/CMakeFiles/hausdorff.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[ 84%] Building CXX object apps/CMakeFiles/hausdorff.dir/hausdorff.cxx.o +[ 85%] Building CXX object apps/CMakeFiles/hausdorff.dir/hausdorff.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/hausdorff.dir/hausdorff.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/hausdorff.cxx make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[ 84%] Built target geomatch +[ 85%] Built target convert_warp make -f apps/CMakeFiles/describe.dir/build.make apps/CMakeFiles/describe.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/describe.dir/DependInfo.cmake --color= Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/describe.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/describe.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/describe.dir/depend.internal". +make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' Scanning dependencies of target describe make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/describe.dir/build.make apps/CMakeFiles/describe.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[ 84%] Building CXX object apps/CMakeFiles/describe.dir/describe.cxx.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/describe.dir/describe.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/describe.cxx -In file included from /build/cmtk-3.3.1p1+dfsg/apps/average_labels.cxx:37: -/build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] - 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); - | ^~~~~ -In file included from /build/cmtk-3.3.1p1+dfsg/apps/hausdorff.cxx:33: -/build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] - 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); - | ^~~~~ -[ 84%] Linking CXX executable ../bin/film -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/film.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/film.dir/film.cxx.o -o ../bin/film -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so -In file included from /build/cmtk-3.3.1p1+dfsg/apps/convert_warp.cxx:35: -/build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] - 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); - | ^~~~~ -In file included from /build/cmtk-3.3.1p1+dfsg/apps/make_initial_affine.cxx:36: -/build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] - 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); - | ^~~~~ -make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[ 84%] Built target film +[ 85%] Built target average_labels make -f apps/CMakeFiles/jidb.dir/build.make apps/CMakeFiles/jidb.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/jidb.dir/DependInfo.cmake --color= +[ 85%] Building CXX object apps/CMakeFiles/describe.dir/describe.cxx.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/describe.dir/describe.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/describe.cxx +[ 85%] Linking CXX executable ../bin/groupwise_warp +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/groupwise_warp.dir/link.txt --verbose=1 Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/jidb.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/jidb.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/jidb.dir/depend.internal". -[ 84%] Linking CXX executable ../bin/detect_adni_phantom -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/detect_adni_phantom.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/detect_adni_phantom.dir/detect_adni_phantom.cxx.o -o ../bin/detect_adni_phantom -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so +/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/groupwise_warp.dir/groupwise_warp.cxx.o -o ../bin/groupwise_warp -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so Scanning dependencies of target jidb make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/jidb.dir/build.make apps/CMakeFiles/jidb.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[ 84%] Building CXX object apps/CMakeFiles/jidb.dir/jidb.cxx.o +[ 85%] Building CXX object apps/CMakeFiles/jidb.dir/jidb.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/jidb.dir/jidb.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/jidb.cxx -In file included from /build/cmtk-3.3.1p1+dfsg/apps/describe.cxx:35: -/build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] - 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); - | ^~~~~ +[ 85%] Linking CXX executable ../bin/convertx +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/convertx.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/convertx.dir/convertx.cxx.o -o ../bin/convertx -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so +make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[ 84%] Built target detect_adni_phantom +[ 85%] Built target groupwise_warp make -f apps/CMakeFiles/mk_nifti_hdr.dir/build.make apps/CMakeFiles/mk_nifti_hdr.dir/depend +[ 85%] Built target convertx +make -f apps/CMakeFiles/levelset.dir/build.make apps/CMakeFiles/levelset.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/mk_nifti_hdr.dir/DependInfo.cmake --color= +make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/levelset.dir/DependInfo.cmake --color= Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/mk_nifti_hdr.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/mk_nifti_hdr.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/mk_nifti_hdr.dir/depend.internal". +Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/levelset.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/levelset.dir/depend.internal". +Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/levelset.dir/depend.internal". Scanning dependencies of target mk_nifti_hdr make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/mk_nifti_hdr.dir/build.make apps/CMakeFiles/mk_nifti_hdr.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[ 84%] Building CXX object apps/CMakeFiles/mk_nifti_hdr.dir/mk_nifti_hdr.cxx.o +Scanning dependencies of target levelset +make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +[ 85%] Building CXX object apps/CMakeFiles/mk_nifti_hdr.dir/mk_nifti_hdr.cxx.o +make -f apps/CMakeFiles/levelset.dir/build.make apps/CMakeFiles/levelset.dir/build cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/mk_nifti_hdr.dir/mk_nifti_hdr.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/mk_nifti_hdr.cxx +make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +[ 85%] Building CXX object apps/CMakeFiles/levelset.dir/levelset.cxx.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/levelset.dir/levelset.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/levelset.cxx +In file included from /build/cmtk-3.3.1p1+dfsg/apps/hausdorff.cxx:33: +/build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] + 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); + | ^~~~~ +In file included from /build/cmtk-3.3.1p1+dfsg/apps/describe.cxx:35: +/build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] + 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); + | ^~~~~ +In file included from /build/cmtk-3.3.1p1+dfsg/apps/jidb.cxx:35: +/build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] + 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); + | ^~~~~ /build/cmtk-3.3.1p1+dfsg/apps/describe.cxx: In function 'void DescribeImage(const char*)': /build/cmtk-3.3.1p1+dfsg/apps/describe.cxx:88:30: warning: format '%d' expects argument of type 'int', but argument 3 has type 'long long int' [-Wformat=] 88 | fprintf( stdout, "XDIM\t%d\nYDIM\t%d\nZDIM\t%d\n", volume->GetDims()[cmtk::AXIS_X], volume->GetDims()[cmtk::AXIS_Y], volume->GetDims()[cmtk::AXIS_Z] ); @@ -3647,36 +3778,22 @@ | | | int | %lld -[ 84%] Linking CXX executable ../bin/mcaffine -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/mcaffine.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/mcaffine.dir/mcaffine.cxx.o -o ../bin/mcaffine -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so -In file included from /build/cmtk-3.3.1p1+dfsg/apps/jidb.cxx:35: +[ 85%] Linking CXX executable ../bin/make_initial_affine +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/make_initial_affine.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/make_initial_affine.dir/make_initial_affine.cxx.o -o ../bin/make_initial_affine -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so +In file included from /build/cmtk-3.3.1p1+dfsg/apps/mk_nifti_hdr.cxx:35: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[ 84%] Built target mcaffine -make -f apps/CMakeFiles/levelset.dir/build.make apps/CMakeFiles/levelset.dir/depend -make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/levelset.dir/DependInfo.cmake --color= -Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/levelset.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/levelset.dir/depend.internal". -Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/levelset.dir/depend.internal". -Scanning dependencies of target levelset -make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make -f apps/CMakeFiles/levelset.dir/build.make apps/CMakeFiles/levelset.dir/build -make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[ 84%] Building CXX object apps/CMakeFiles/levelset.dir/levelset.cxx.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/levelset.dir/levelset.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/levelset.cxx -In file included from /build/cmtk-3.3.1p1+dfsg/apps/mk_nifti_hdr.cxx:35: +[ 85%] Built target make_initial_affine +make -f apps/CMakeFiles/warpx.dir/build.make apps/CMakeFiles/warpx.dir/depend +In file included from /build/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkSimpleLevelsetCommandLineBase.h:40, + from /build/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkSimpleLevelsetCommandLine.h:41, + from /build/cmtk-3.3.1p1+dfsg/apps/levelset.cxx:37: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ -[ 84%] Linking CXX executable ../bin/average_images -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/average_images.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/average_images.dir/average_images.cxx.o -o ../bin/average_images -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so -make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[ 84%] Built target average_images -make -f apps/CMakeFiles/warpx.dir/build.make apps/CMakeFiles/warpx.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/warpx.dir/DependInfo.cmake --color= Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/warpx.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/warpx.dir/depend.internal". @@ -3685,78 +3802,80 @@ make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/warpx.dir/build.make apps/CMakeFiles/warpx.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[ 84%] Building CXX object apps/CMakeFiles/warpx.dir/warpx.cxx.o +[ 85%] Building CXX object apps/CMakeFiles/warpx.dir/warpx.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/warpx.dir/warpx.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/warpx.cxx -[ 84%] Linking CXX executable ../bin/vol2csv -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/vol2csv.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/vol2csv.dir/vol2csv.cxx.o -o ../bin/vol2csv -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so +In file included from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairRegistration.h:39, + from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairNonrigidRegistration.h:40, + from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairNonrigidRegistrationCommandLine.h:38, + from /build/cmtk-3.3.1p1+dfsg/apps/warpx.cxx:35: +/build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] + 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); + | ^~~~~ +[ 86%] Linking CXX executable ../bin/levelset +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/levelset.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/levelset.dir/levelset.cxx.o -o ../bin/levelset -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so +[ 87%] Linking CXX executable ../bin/hausdorff +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/hausdorff.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/hausdorff.dir/hausdorff.cxx.o -o ../bin/hausdorff -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[ 84%] Built target vol2csv +[ 87%] Built target levelset make -f apps/CMakeFiles/unsplit.dir/build.make apps/CMakeFiles/unsplit.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/unsplit.dir/DependInfo.cmake --color= -[ 85%] Linking CXX executable ../bin/hausdorff -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/hausdorff.dir/link.txt --verbose=1 +make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/unsplit.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/unsplit.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/unsplit.dir/depend.internal". -/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/hausdorff.dir/hausdorff.cxx.o -o ../bin/hausdorff -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so +[ 87%] Built target hausdorff Scanning dependencies of target unsplit make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/unsplit.dir/build.make apps/CMakeFiles/unsplit.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[ 85%] Building CXX object apps/CMakeFiles/unsplit.dir/unsplit.cxx.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/unsplit.dir/unsplit.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/unsplit.cxx -[ 85%] Linking CXX executable ../bin/lvote -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/lvote.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/lvote.dir/lvote.cxx.o -o ../bin/lvote -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so -make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[ 85%] Built target hausdorff make -f apps/CMakeFiles/lmsba.dir/build.make apps/CMakeFiles/lmsba.dir/depend +[ 87%] Linking CXX executable ../bin/warpx +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/warpx.dir/link.txt --verbose=1 make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/lmsba.dir/DependInfo.cmake --color= +[ 87%] Building CXX object apps/CMakeFiles/unsplit.dir/unsplit.cxx.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/unsplit.dir/unsplit.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/unsplit.cxx +/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/warpx.dir/warpx.cxx.o -o ../bin/warpx -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/lmsba.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/lmsba.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/lmsba.dir/depend.internal". Scanning dependencies of target lmsba make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/lmsba.dir/build.make apps/CMakeFiles/lmsba.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[ 85%] Building CXX object apps/CMakeFiles/lmsba.dir/lmsba.cxx.o +[ 87%] Building CXX object apps/CMakeFiles/lmsba.dir/lmsba.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/lmsba.dir/lmsba.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/lmsba.cxx -In file included from /build/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkSimpleLevelsetCommandLineBase.h:40, - from /build/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkSimpleLevelsetCommandLine.h:41, - from /build/cmtk-3.3.1p1+dfsg/apps/levelset.cxx:37: -/build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] - 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); - | ^~~~~ make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[ 85%] Built target lvote +[ 87%] Built target warpx make -f apps/CMakeFiles/similarity.dir/build.make apps/CMakeFiles/similarity.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/similarity.dir/DependInfo.cmake --color= Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/similarity.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/similarity.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/similarity.dir/depend.internal". +In file included from /build/cmtk-3.3.1p1+dfsg/apps/unsplit.cxx:35: +/build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] + 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); + | ^~~~~ Scanning dependencies of target similarity make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/similarity.dir/build.make apps/CMakeFiles/similarity.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[ 85%] Building CXX object apps/CMakeFiles/similarity.dir/similarity.cxx.o +[ 87%] Building CXX object apps/CMakeFiles/similarity.dir/similarity.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/similarity.dir/similarity.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/similarity.cxx -[ 85%] Linking CXX executable ../bin/average_affine -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/average_affine.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/average_affine.dir/average_affine.cxx.o -o ../bin/average_affine -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so -In file included from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairRegistration.h:39, - from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairNonrigidRegistration.h:40, - from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairNonrigidRegistrationCommandLine.h:38, - from /build/cmtk-3.3.1p1+dfsg/apps/warpx.cxx:35: +In file included from /build/cmtk-3.3.1p1+dfsg/apps/lmsba.cxx:35: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ -make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -In file included from /build/cmtk-3.3.1p1+dfsg/apps/unsplit.cxx:35: +In file included from /build/cmtk-3.3.1p1+dfsg/apps/similarity.cxx:35: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ -[ 85%] Built target average_affine +[ 88%] Linking CXX executable ../bin/mk_nifti_hdr +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/mk_nifti_hdr.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/mk_nifti_hdr.dir/mk_nifti_hdr.cxx.o -o ../bin/mk_nifti_hdr -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so +make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +[ 88%] Built target mk_nifti_hdr make -f apps/CMakeFiles/sequence.dir/build.make apps/CMakeFiles/sequence.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/sequence.dir/DependInfo.cmake --color= @@ -3766,24 +3885,13 @@ make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/sequence.dir/build.make apps/CMakeFiles/sequence.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[ 85%] Building CXX object apps/CMakeFiles/sequence.dir/sequence.cxx.o +[ 88%] Building CXX object apps/CMakeFiles/sequence.dir/sequence.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/sequence.dir/sequence.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/sequence.cxx -[ 85%] Linking CXX executable ../bin/convert_warp -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/convert_warp.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/convert_warp.dir/convert_warp.cxx.o -o ../bin/convert_warp -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so -In file included from /build/cmtk-3.3.1p1+dfsg/apps/lmsba.cxx:35: -/build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] - 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); - | ^~~~~ -In file included from /build/cmtk-3.3.1p1+dfsg/apps/similarity.cxx:35: -/build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] - 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); - | ^~~~~ -[ 86%] Linking CXX executable ../bin/average_labels -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/average_labels.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/average_labels.dir/average_labels.cxx.o -o ../bin/average_labels -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so +[ 89%] Linking CXX executable ../bin/describe +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/describe.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/describe.dir/describe.cxx.o -o ../bin/describe -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[ 86%] Built target convert_warp +[ 89%] Built target describe make -f apps/CMakeFiles/mat2dof.dir/build.make apps/CMakeFiles/mat2dof.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/mat2dof.dir/DependInfo.cmake --color= @@ -3793,66 +3901,87 @@ make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/mat2dof.dir/build.make apps/CMakeFiles/mat2dof.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[ 86%] Building CXX object apps/CMakeFiles/mat2dof.dir/mat2dof.cxx.o +[ 89%] Building CXX object apps/CMakeFiles/mat2dof.dir/mat2dof.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/mat2dof.dir/mat2dof.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/mat2dof.cxx -[ 87%] Linking CXX executable ../bin/levelset -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/levelset.dir/link.txt --verbose=1 +In file included from /build/cmtk-3.3.1p1+dfsg/apps/sequence.cxx:35: +/build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] + 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); + | ^~~~~ +In file included from /build/cmtk-3.3.1p1+dfsg/apps/mat2dof.cxx:36: +/build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] + 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); + | ^~~~~ +[ 89%] Linking CXX executable ../bin/unsplit +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/unsplit.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/unsplit.dir/unsplit.cxx.o -o ../bin/unsplit -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[ 87%] Linking CXX executable ../bin/warpx -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/warpx.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/levelset.dir/levelset.cxx.o -o ../bin/levelset -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so -[ 87%] Built target average_labels +[ 89%] Built target unsplit make -f apps/CMakeFiles/mk_adni_phantom.dir/build.make apps/CMakeFiles/mk_adni_phantom.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/mk_adni_phantom.dir/DependInfo.cmake --color= -/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/warpx.dir/warpx.cxx.o -o ../bin/warpx -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/mk_adni_phantom.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/mk_adni_phantom.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/mk_adni_phantom.dir/depend.internal". Scanning dependencies of target mk_adni_phantom make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/mk_adni_phantom.dir/build.make apps/CMakeFiles/mk_adni_phantom.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[ 88%] Building CXX object apps/CMakeFiles/mk_adni_phantom.dir/mk_adni_phantom.cxx.o +[ 90%] Building CXX object apps/CMakeFiles/mk_adni_phantom.dir/mk_adni_phantom.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/mk_adni_phantom.dir/mk_adni_phantom.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/mk_adni_phantom.cxx -In file included from /build/cmtk-3.3.1p1+dfsg/apps/sequence.cxx:35: +[ 90%] Linking CXX executable ../bin/lmsba +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/lmsba.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/lmsba.dir/lmsba.cxx.o -o ../bin/lmsba -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so +[ 90%] Linking CXX executable ../bin/similarity +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/similarity.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/similarity.dir/similarity.cxx.o -o ../bin/similarity -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so +In file included from /build/cmtk-3.3.1p1+dfsg/apps/mk_adni_phantom.cxx:35: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[ 88%] Built target warpx +[ 90%] Built target lmsba make -f apps/CMakeFiles/registrationx.dir/build.make apps/CMakeFiles/registrationx.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/registrationx.dir/DependInfo.cmake --color= -[ 88%] Built target levelset +Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/registrationx.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/registrationx.dir/depend.internal". +Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/registrationx.dir/depend.internal". +make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +Scanning dependencies of target registrationx +make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +make -f apps/CMakeFiles/registrationx.dir/build.make apps/CMakeFiles/registrationx.dir/build +[ 90%] Built target similarity +make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/mk_analyze_hdr.dir/build.make apps/CMakeFiles/mk_analyze_hdr.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/mk_analyze_hdr.dir/DependInfo.cmake --color= -Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/registrationx.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/registrationx.dir/depend.internal". -Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/registrationx.dir/depend.internal". +[ 90%] Building CXX object apps/CMakeFiles/registrationx.dir/registrationx.cxx.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/registrationx.dir/registrationx.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/registrationx.cxx Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/mk_analyze_hdr.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/mk_analyze_hdr.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/mk_analyze_hdr.dir/depend.internal". -[ 88%] Linking CXX executable ../bin/make_initial_affine -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/make_initial_affine.dir/link.txt --verbose=1 Scanning dependencies of target mk_analyze_hdr make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/mk_analyze_hdr.dir/build.make apps/CMakeFiles/mk_analyze_hdr.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -Scanning dependencies of target registrationx -/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/make_initial_affine.dir/make_initial_affine.cxx.o -o ../bin/make_initial_affine -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so -make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make -f apps/CMakeFiles/registrationx.dir/build.make apps/CMakeFiles/registrationx.dir/build -make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[ 88%] Building CXX object apps/CMakeFiles/mk_analyze_hdr.dir/mk_analyze_hdr.cxx.o +[ 90%] Building CXX object apps/CMakeFiles/mk_analyze_hdr.dir/mk_analyze_hdr.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/mk_analyze_hdr.dir/mk_analyze_hdr.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/mk_analyze_hdr.cxx -[ 88%] Building CXX object apps/CMakeFiles/registrationx.dir/registrationx.cxx.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/registrationx.dir/registrationx.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/registrationx.cxx -In file included from /build/cmtk-3.3.1p1+dfsg/apps/mat2dof.cxx:36: +[ 90%] Linking CXX executable ../bin/jidb +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/jidb.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/jidb.dir/jidb.cxx.o -o ../bin/jidb -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so +[ 91%] Linking CXX executable ../bin/sequence +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/sequence.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/sequence.dir/sequence.cxx.o -o ../bin/sequence -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so +In file included from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairRegistration.h:39, + from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairAffineRegistration.h:41, + from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairAffineRegistrationCommandLine.h:38, + from /build/cmtk-3.3.1p1+dfsg/apps/registrationx.cxx:40: +/build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] + 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); + | ^~~~~ +In file included from /build/cmtk-3.3.1p1+dfsg/apps/mk_analyze_hdr.cxx:35: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[ 88%] Built target make_initial_affine +[ 91%] Built target jidb make -f apps/CMakeFiles/fib2image.dir/build.make apps/CMakeFiles/fib2image.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/fib2image.dir/DependInfo.cmake --color= @@ -3862,20 +3991,10 @@ make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/fib2image.dir/build.make apps/CMakeFiles/fib2image.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[ 88%] Building CXX object apps/CMakeFiles/fib2image.dir/fib2image.cxx.o +[ 91%] Building CXX object apps/CMakeFiles/fib2image.dir/fib2image.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/fib2image.dir/fib2image.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/fib2image.cxx -[ 88%] Linking CXX executable ../bin/imagemath -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/imagemath.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/imagemath.dir/imagemath.cxx.o -o ../bin/imagemath -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so -In file included from /build/cmtk-3.3.1p1+dfsg/apps/mk_adni_phantom.cxx:35: -/build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] - 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); - | ^~~~~ -[ 89%] Linking CXX executable ../bin/describe -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/describe.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/describe.dir/describe.cxx.o -o ../bin/describe -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[ 89%] Built target imagemath +[ 91%] Built target sequence make -f apps/CMakeFiles/mrbias.dir/build.make apps/CMakeFiles/mrbias.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/mrbias.dir/DependInfo.cmake --color= @@ -3885,14 +4004,24 @@ make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/mrbias.dir/build.make apps/CMakeFiles/mrbias.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[ 89%] Building CXX object apps/CMakeFiles/mrbias.dir/mrbias.cxx.o +[ 91%] Building CXX object apps/CMakeFiles/mrbias.dir/mrbias.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/mrbias.dir/mrbias.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/mrbias.cxx -In file included from /build/cmtk-3.3.1p1+dfsg/apps/mk_analyze_hdr.cxx:35: +[ 92%] Linking CXX executable ../bin/registrationx +In file included from /build/cmtk-3.3.1p1+dfsg/apps/fib2image.cxx:35: +/build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] + 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); + | ^~~~~ +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/registrationx.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/registrationx.dir/registrationx.cxx.o -o ../bin/registrationx -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so +[ 93%] Linking CXX executable ../bin/mat2dof +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/mat2dof.dir/link.txt --verbose=1 +In file included from /build/cmtk-3.3.1p1+dfsg/apps/mrbias.cxx:35: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ +/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/mat2dof.dir/mat2dof.cxx.o -o ../bin/mat2dof -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[ 89%] Built target describe +[ 93%] Built target registrationx make -f apps/CMakeFiles/overlap.dir/build.make apps/CMakeFiles/overlap.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/overlap.dir/DependInfo.cmake --color= @@ -3902,28 +4031,10 @@ make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/overlap.dir/build.make apps/CMakeFiles/overlap.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[ 90%] Building CXX object apps/CMakeFiles/overlap.dir/overlap.cxx.o +[ 94%] Building CXX object apps/CMakeFiles/overlap.dir/overlap.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/overlap.dir/overlap.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/overlap.cxx -In file included from /build/cmtk-3.3.1p1+dfsg/apps/fib2image.cxx:35: -/build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] - 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); - | ^~~~~ -In file included from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairRegistration.h:39, - from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairAffineRegistration.h:41, - from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairAffineRegistrationCommandLine.h:38, - from /build/cmtk-3.3.1p1+dfsg/apps/registrationx.cxx:40: -/build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] - 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); - | ^~~~~ -In file included from /build/cmtk-3.3.1p1+dfsg/apps/mrbias.cxx:35: -/build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] - 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); - | ^~~~~ -[ 91%] Linking CXX executable ../bin/mk_nifti_hdr -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/mk_nifti_hdr.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/mk_nifti_hdr.dir/mk_nifti_hdr.cxx.o -o ../bin/mk_nifti_hdr -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[ 91%] Built target mk_nifti_hdr +[ 94%] Built target mat2dof make -f apps/CMakeFiles/xform2dfield.dir/build.make apps/CMakeFiles/xform2dfield.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/xform2dfield.dir/DependInfo.cmake --color= @@ -3933,74 +4044,99 @@ make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/xform2dfield.dir/build.make apps/CMakeFiles/xform2dfield.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[ 92%] Building CXX object apps/CMakeFiles/xform2dfield.dir/xform2dfield.cxx.o +[ 95%] Building CXX object apps/CMakeFiles/xform2dfield.dir/xform2dfield.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/xform2dfield.dir/xform2dfield.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/xform2dfield.cxx In file included from /build/cmtk-3.3.1p1+dfsg/apps/overlap.cxx:36: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ -[ 92%] Linking CXX executable ../bin/groupwise_warp -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/groupwise_warp.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/groupwise_warp.dir/groupwise_warp.cxx.o -o ../bin/groupwise_warp -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so -[ 93%] Linking CXX executable ../bin/registrationx -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/registrationx.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/registrationx.dir/registrationx.cxx.o -o ../bin/registrationx -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so +In file included from /usr/include/string.h:495, + from /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:49, + from /build/cmtk-3.3.1p1+dfsg/apps/mk_analyze_hdr.cxx:35: +In function 'char* strncpy(char*, const char*, size_t)', + inlined from 'void cmtk::FileHeader::StoreFieldString(size_t, const char*, size_t)' at /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkFileHeader.h:74:14, + inlined from 'void cmtk::FileHeader::StoreFieldString(size_t, const char*, size_t)' at /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkFileHeader.h:71:8, + inlined from 'int doMain(int, const char**)' at /build/cmtk-3.3.1p1+dfsg/apps/mk_analyze_hdr.cxx:275:28: +/usr/include/i386-linux-gnu/bits/string_fortified.h:106:34: warning: 'char* __builtin_strncpy(char*, const char*, unsigned int)' specified bound depends on the length of the source argument [-Wstringop-overflow=] + 106 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); + | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/cmtk-3.3.1p1+dfsg/apps/mk_analyze_hdr.cxx: In function 'int doMain(int, const char**)': +/build/cmtk-3.3.1p1+dfsg/apps/mk_analyze_hdr.cxx:275:72: note: length computed here + 275 | header.StoreFieldString( 148, Description, std::min( strlen( Description )+1, 80 ) ); + | ~~~~~~^~~~~~~~~~~~~~~ +In file included from /build/cmtk-3.3.1p1+dfsg/apps/xform2dfield.cxx:38: +/build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] + 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); + | ^~~~~ +[ 95%] Linking CXX executable ../bin/mk_adni_phantom +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/mk_adni_phantom.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/mk_adni_phantom.dir/mk_adni_phantom.cxx.o -o ../bin/mk_adni_phantom -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[ 93%] Built target registrationx +[ 95%] Built target mk_adni_phantom make -f apps/CMakeFiles/concat_affine.dir/build.make apps/CMakeFiles/concat_affine.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/concat_affine.dir/DependInfo.cmake --color= -make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/concat_affine.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/concat_affine.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/concat_affine.dir/depend.internal". -[ 93%] Built target groupwise_warp -make -f apps/CMakeFiles/probe.dir/build.make apps/CMakeFiles/probe.dir/depend Scanning dependencies of target concat_affine -make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/probe.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/concat_affine.dir/build.make apps/CMakeFiles/concat_affine.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +[ 95%] Building CXX object apps/CMakeFiles/concat_affine.dir/concat_affine.cxx.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/concat_affine.dir/concat_affine.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/concat_affine.cxx +[ 95%] Linking CXX executable ../bin/mk_analyze_hdr +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/mk_analyze_hdr.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/mk_analyze_hdr.dir/mk_analyze_hdr.cxx.o -o ../bin/mk_analyze_hdr -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so +In file included from /build/cmtk-3.3.1p1+dfsg/apps/concat_affine.cxx:36: +/build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] + 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); + | ^~~~~ +make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +[ 95%] Built target mk_analyze_hdr +make -f apps/CMakeFiles/probe.dir/build.make apps/CMakeFiles/probe.dir/depend +make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/probe.dir/DependInfo.cmake --color= Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/probe.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/probe.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/probe.dir/depend.internal". -[ 93%] Building CXX object apps/CMakeFiles/concat_affine.dir/concat_affine.cxx.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/concat_affine.dir/concat_affine.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/concat_affine.cxx Scanning dependencies of target probe make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/probe.dir/build.make apps/CMakeFiles/probe.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[ 93%] Building CXX object apps/CMakeFiles/probe.dir/probe.cxx.o +[ 95%] Linking CXX executable ../bin/fib2image +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/fib2image.dir/link.txt --verbose=1 +[ 95%] Building CXX object apps/CMakeFiles/probe.dir/probe.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/probe.dir/probe.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/probe.cxx -[ 93%] Linking CXX executable ../bin/convertx -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/convertx.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/convertx.dir/convertx.cxx.o -o ../bin/convertx -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so -In file included from /build/cmtk-3.3.1p1+dfsg/apps/xform2dfield.cxx:38: -/build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] - 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); - | ^~~~~ +/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/fib2image.dir/fib2image.cxx.o -o ../bin/fib2image -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[ 93%] Built target convertx +[ 95%] Built target fib2image make -f apps/CMakeFiles/reformatx.dir/build.make apps/CMakeFiles/reformatx.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/reformatx.dir/DependInfo.cmake --color= -[ 93%] Linking CXX executable ../bin/unsplit -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/unsplit.dir/link.txt --verbose=1 Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/reformatx.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/reformatx.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/reformatx.dir/depend.internal". -/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/unsplit.dir/unsplit.cxx.o -o ../bin/unsplit -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so Scanning dependencies of target reformatx make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/reformatx.dir/build.make apps/CMakeFiles/reformatx.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[ 94%] Building CXX object apps/CMakeFiles/reformatx.dir/reformatx.cxx.o +[ 96%] Building CXX object apps/CMakeFiles/reformatx.dir/reformatx.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/reformatx.dir/reformatx.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/reformatx.cxx -make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -In file included from /build/cmtk-3.3.1p1+dfsg/apps/concat_affine.cxx:36: +In file included from /build/cmtk-3.3.1p1+dfsg/apps/probe.cxx:35: +/build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] + 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); + | ^~~~~ +In file included from /build/cmtk-3.3.1p1+dfsg/apps/reformatx.cxx:37: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ -[ 94%] Built target unsplit +[ 96%] Linking CXX executable ../bin/mcwarp +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/mcwarp.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/mcwarp.dir/mcwarp.cxx.o -o ../bin/mcwarp -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so +[ 96%] Linking CXX executable ../bin/overlap +make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/overlap.dir/link.txt --verbose=1 +[ 96%] Built target mcwarp make -f apps/CMakeFiles/xform2itk.dir/build.make apps/CMakeFiles/xform2itk.dir/depend +/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/overlap.dir/overlap.cxx.o -o ../bin/overlap -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/xform2itk.dir/DependInfo.cmake --color= Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/xform2itk.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/xform2itk.dir/depend.internal". @@ -4009,55 +4145,30 @@ make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/xform2itk.dir/build.make apps/CMakeFiles/xform2itk.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -In file included from /usr/include/string.h:495, - from /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:49, - from /build/cmtk-3.3.1p1+dfsg/apps/mk_analyze_hdr.cxx:35: -In function 'char* strncpy(char*, const char*, size_t)', - inlined from 'void cmtk::FileHeader::StoreFieldString(size_t, const char*, size_t)' at /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkFileHeader.h:74:14, - inlined from 'void cmtk::FileHeader::StoreFieldString(size_t, const char*, size_t)' at /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkFileHeader.h:71:8, - inlined from 'int doMain(int, const char**)' at /build/cmtk-3.3.1p1+dfsg/apps/mk_analyze_hdr.cxx:275:28: -/usr/include/i386-linux-gnu/bits/string_fortified.h:106:34: warning: 'char* __builtin_strncpy(char*, const char*, unsigned int)' specified bound depends on the length of the source argument [-Wstringop-overflow=] - 106 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); - | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/cmtk-3.3.1p1+dfsg/apps/mk_analyze_hdr.cxx: In function 'int doMain(int, const char**)': -/build/cmtk-3.3.1p1+dfsg/apps/mk_analyze_hdr.cxx:275:72: note: length computed here - 275 | header.StoreFieldString( 148, Description, std::min( strlen( Description )+1, 80 ) ); - | ~~~~~~^~~~~~~~~~~~~~~ -[ 94%] Building CXX object apps/CMakeFiles/xform2itk.dir/xform2itk.cxx.o +[ 96%] Building CXX object apps/CMakeFiles/xform2itk.dir/xform2itk.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/xform2itk.dir/xform2itk.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/xform2itk.cxx -In file included from /build/cmtk-3.3.1p1+dfsg/apps/probe.cxx:35: -/build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] - 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); - | ^~~~~ -[ 94%] Linking CXX executable ../bin/lmsba -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/lmsba.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/lmsba.dir/lmsba.cxx.o -o ../bin/lmsba -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[ 94%] Built target lmsba +[ 96%] Built target overlap make -f apps/CMakeFiles/registration.dir/build.make apps/CMakeFiles/registration.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/registration.dir/DependInfo.cmake --color= Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/registration.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/registration.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/registration.dir/depend.internal". -In file included from /build/cmtk-3.3.1p1+dfsg/apps/reformatx.cxx:37: -/build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] - 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); - | ^~~~~ Scanning dependencies of target registration make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/registration.dir/build.make apps/CMakeFiles/registration.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[ 94%] Building CXX object apps/CMakeFiles/registration.dir/registration.cxx.o +[ 96%] Building CXX object apps/CMakeFiles/registration.dir/registration.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/registration.dir/registration.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/registration.cxx In file included from /build/cmtk-3.3.1p1+dfsg/apps/xform2itk.cxx:36: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ -[ 95%] Linking CXX executable ../bin/sequence -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/sequence.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/sequence.dir/sequence.cxx.o -o ../bin/sequence -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so +[ 96%] Linking CXX executable ../bin/xform2dfield +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/xform2dfield.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/xform2dfield.dir/xform2dfield.cxx.o -o ../bin/xform2dfield -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[ 95%] Built target sequence +[ 96%] Built target xform2dfield make -f apps/CMakeFiles/warp2ps.dir/build.make apps/CMakeFiles/warp2ps.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/warp2ps.dir/DependInfo.cmake --color= @@ -4067,12 +4178,8 @@ make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/warp2ps.dir/build.make apps/CMakeFiles/warp2ps.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[ 95%] Building CXX object apps/CMakeFiles/warp2ps.dir/warp2ps.cxx.o +[ 96%] Building CXX object apps/CMakeFiles/warp2ps.dir/warp2ps.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/warp2ps.dir/warp2ps.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/warp2ps.cxx -[ 95%] Linking CXX executable ../bin/mk_adni_phantom -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/mk_adni_phantom.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/mk_adni_phantom.dir/mk_adni_phantom.cxx.o -o ../bin/mk_adni_phantom -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so -make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' In file included from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelRegistration.h:52, from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkAffineRegistration.h:38, from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkAffineRegistrationCommandLine.h:38, @@ -4080,82 +4187,99 @@ /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ -[ 95%] Built target mk_adni_phantom +[ 97%] Linking CXX executable ../bin/concat_affine +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/concat_affine.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/concat_affine.dir/concat_affine.cxx.o -o ../bin/concat_affine -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so +make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +[ 97%] Built target concat_affine make -f apps/CMakeFiles/fit_spline_dfield.dir/build.make apps/CMakeFiles/fit_spline_dfield.dir/depend +[ 97%] Linking CXX executable ../bin/registration +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/registration.dir/link.txt --verbose=1 make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/fit_spline_dfield.dir/DependInfo.cmake --color= +/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/registration.dir/registration.cxx.o -o ../bin/registration -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/fit_spline_dfield.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/fit_spline_dfield.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/fit_spline_dfield.dir/depend.internal". Scanning dependencies of target fit_spline_dfield make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/fit_spline_dfield.dir/build.make apps/CMakeFiles/fit_spline_dfield.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[ 95%] Building CXX object apps/CMakeFiles/fit_spline_dfield.dir/fit_spline_dfield.cxx.o +[ 97%] Building CXX object apps/CMakeFiles/fit_spline_dfield.dir/fit_spline_dfield.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/fit_spline_dfield.dir/fit_spline_dfield.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/fit_spline_dfield.cxx -[ 95%] Linking CXX executable ../bin/similarity -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/similarity.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/similarity.dir/similarity.cxx.o -o ../bin/similarity -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so -[ 96%] Linking CXX executable ../bin/mat2dof -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/mat2dof.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/mat2dof.dir/mat2dof.cxx.o -o ../bin/mat2dof -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so +In file included from /build/cmtk-3.3.1p1+dfsg/apps/warp2ps.cxx:37: +/build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] + 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); + | ^~~~~ make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[ 96%] Linking CXX executable ../bin/fib2image -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/fib2image.dir/link.txt --verbose=1 -[ 96%] Built target similarity -/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/fib2image.dir/fib2image.cxx.o -o ../bin/fib2image -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so +[ 97%] Built target registration make -f apps/CMakeFiles/regress.dir/build.make apps/CMakeFiles/regress.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/regress.dir/DependInfo.cmake --color= -make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/regress.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/regress.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/regress.dir/depend.internal". -[ 96%] Built target mat2dof -make -f apps/CMakeFiles/gregxform.dir/build.make apps/CMakeFiles/gregxform.dir/depend Scanning dependencies of target regress -make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/gregxform.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/regress.dir/build.make apps/CMakeFiles/regress.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +[ 97%] Building CXX object apps/CMakeFiles/regress.dir/regress.cxx.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/regress.dir/regress.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/regress.cxx +[ 97%] Linking CXX executable ../bin/mrbias +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/mrbias.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/mrbias.dir/mrbias.cxx.o -o ../bin/mrbias -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so +In file included from /build/cmtk-3.3.1p1+dfsg/apps/fit_spline_dfield.cxx:36: +/build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] + 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); + | ^~~~~ +make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +[ 97%] Built target mrbias +make -f apps/CMakeFiles/gregxform.dir/build.make apps/CMakeFiles/gregxform.dir/depend +make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/gregxform.dir/DependInfo.cmake --color= Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/gregxform.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/gregxform.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/gregxform.dir/depend.internal". -[ 96%] Building CXX object apps/CMakeFiles/regress.dir/regress.cxx.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/regress.dir/regress.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/regress.cxx Scanning dependencies of target gregxform make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/gregxform.dir/build.make apps/CMakeFiles/gregxform.dir/build -[ 96%] Linking CXX executable ../bin/mk_analyze_hdr -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/mk_analyze_hdr.dir/link.txt --verbose=1 make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/mk_analyze_hdr.dir/mk_analyze_hdr.cxx.o -o ../bin/mk_analyze_hdr -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so -[ 96%] Building CXX object apps/CMakeFiles/gregxform.dir/gregxform.cxx.o +[ 97%] Building CXX object apps/CMakeFiles/gregxform.dir/gregxform.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/gregxform.dir/gregxform.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/gregxform.cxx -In file included from /build/cmtk-3.3.1p1+dfsg/apps/warp2ps.cxx:37: +In file included from /build/cmtk-3.3.1p1+dfsg/apps/regress.cxx:37: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ -[ 96%] Linking CXX executable ../bin/registration -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/registration.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/registration.dir/registration.cxx.o -o ../bin/registration -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so -In file included from /build/cmtk-3.3.1p1+dfsg/apps/fit_spline_dfield.cxx:36: +In file included from /build/cmtk-3.3.1p1+dfsg/apps/gregxform.cxx:35: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ +/build/cmtk-3.3.1p1+dfsg/apps/gregxform.cxx: In function 'int doMain(int, const char**)': +/build/cmtk-3.3.1p1+dfsg/apps/gregxform.cxx:191:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] + 191 | fgets( line, 80, infile ); + | ~~~~~^~~~~~~~~~~~~~~~~~~~ +[ 97%] Linking CXX executable ../bin/xform2itk +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/xform2itk.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/xform2itk.dir/xform2itk.cxx.o -o ../bin/xform2itk -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[ 96%] Built target fib2image +[ 97%] Built target xform2itk make -f apps/CMakeFiles/epiunwarp.dir/build.make apps/CMakeFiles/epiunwarp.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/epiunwarp.dir/DependInfo.cmake --color= Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/epiunwarp.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/epiunwarp.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/epiunwarp.dir/depend.internal". -make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' Scanning dependencies of target epiunwarp make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/epiunwarp.dir/build.make apps/CMakeFiles/epiunwarp.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[ 96%] Building CXX object apps/CMakeFiles/epiunwarp.dir/epiunwarp.cxx.o +[ 97%] Building CXX object apps/CMakeFiles/epiunwarp.dir/epiunwarp.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/epiunwarp.dir/epiunwarp.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/epiunwarp.cxx -[ 96%] Built target mk_analyze_hdr +In file included from /build/cmtk-3.3.1p1+dfsg/apps/epiunwarp.cxx:35: +/build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] + 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); + | ^~~~~ +[ 97%] Linking CXX executable ../bin/probe +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/probe.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/probe.dir/probe.cxx.o -o ../bin/probe -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so +make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +[ 97%] Built target probe make -f apps/CMakeFiles/sbai.dir/build.make apps/CMakeFiles/sbai.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/sbai.dir/DependInfo.cmake --color= @@ -4165,10 +4289,20 @@ make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/sbai.dir/build.make apps/CMakeFiles/sbai.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[ 96%] Building CXX object apps/CMakeFiles/sbai.dir/sbai.cxx.o +[ 97%] Building CXX object apps/CMakeFiles/sbai.dir/sbai.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/sbai.dir/sbai.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/sbai.cxx +In file included from /build/cmtk-3.3.1p1+dfsg/apps/sbai.cxx:37: +/build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] + 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); + | ^~~~~ +[ 97%] Linking CXX executable ../bin/fit_spline_dfield +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/fit_spline_dfield.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/fit_spline_dfield.dir/fit_spline_dfield.cxx.o -o ../bin/fit_spline_dfield -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so +[ 97%] Linking CXX executable ../bin/regress +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/regress.dir/link.txt --verbose=1 make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[ 96%] Built target registration +/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/regress.dir/regress.cxx.o -o ../bin/regress -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so +[ 97%] Built target fit_spline_dfield make -f apps/CMakeFiles/reorient.dir/build.make apps/CMakeFiles/reorient.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/reorient.dir/DependInfo.cmake --color= @@ -4178,26 +4312,17 @@ make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/reorient.dir/build.make apps/CMakeFiles/reorient.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[ 96%] Building CXX object apps/CMakeFiles/reorient.dir/reorient.cxx.o +[ 97%] Building CXX object apps/CMakeFiles/reorient.dir/reorient.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/reorient.dir/reorient.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/reorient.cxx -[ 96%] Linking CXX executable ../bin/jidb -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/jidb.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/jidb.dir/jidb.cxx.o -o ../bin/jidb -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so -In file included from /build/cmtk-3.3.1p1+dfsg/apps/gregxform.cxx:35: -/build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] - 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); - | ^~~~~ -In file included from /build/cmtk-3.3.1p1+dfsg/apps/epiunwarp.cxx:35: -/build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] - 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); - | ^~~~~ -In file included from /build/cmtk-3.3.1p1+dfsg/apps/regress.cxx:37: -/build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] - 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); - | ^~~~~ +[ 97%] Linking CXX executable ../bin/gregxform +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/gregxform.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/gregxform.dir/gregxform.cxx.o -o ../bin/gregxform -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[ 96%] Built target jidb +[ 97%] Linking CXX executable ../bin/warp2ps +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/warp2ps.dir/link.txt --verbose=1 +[ 97%] Built target regress make -f apps/CMakeFiles/fit_affine_xform_landmarks.dir/build.make apps/CMakeFiles/fit_affine_xform_landmarks.dir/depend +/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/warp2ps.dir/warp2ps.cxx.o -o ../bin/warp2ps -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/fit_affine_xform_landmarks.dir/DependInfo.cmake --color= Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/fit_affine_xform_landmarks.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/fit_affine_xform_landmarks.dir/depend.internal". @@ -4206,46 +4331,32 @@ make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/fit_affine_xform_landmarks.dir/build.make apps/CMakeFiles/fit_affine_xform_landmarks.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[ 97%] Building CXX object apps/CMakeFiles/fit_affine_xform_landmarks.dir/fit_affine_xform_landmarks.cxx.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/fit_affine_xform_landmarks.dir/fit_affine_xform_landmarks.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/fit_affine_xform_landmarks.cxx -In file included from /build/cmtk-3.3.1p1+dfsg/apps/sbai.cxx:37: +In file included from /build/cmtk-3.3.1p1+dfsg/apps/reorient.cxx:35: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ -[ 97%] Linking CXX executable ../bin/overlap -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/overlap.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/overlap.dir/overlap.cxx.o -o ../bin/overlap -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so +[ 98%] Building CXX object apps/CMakeFiles/fit_affine_xform_landmarks.dir/fit_affine_xform_landmarks.cxx.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/fit_affine_xform_landmarks.dir/fit_affine_xform_landmarks.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/fit_affine_xform_landmarks.cxx make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[ 97%] Built target overlap +[ 98%] Built target gregxform make -f apps/CMakeFiles/interleaved_bad_slices.dir/build.make apps/CMakeFiles/interleaved_bad_slices.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/interleaved_bad_slices.dir/DependInfo.cmake --color= +make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/interleaved_bad_slices.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/interleaved_bad_slices.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/interleaved_bad_slices.dir/depend.internal". -In file included from /build/cmtk-3.3.1p1+dfsg/apps/reorient.cxx:35: -/build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] - 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); - | ^~~~~ +[ 98%] Built target warp2ps +make -f apps/CMakeFiles/statistics.dir/build.make apps/CMakeFiles/statistics.dir/depend +make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/statistics.dir/DependInfo.cmake --color= Scanning dependencies of target interleaved_bad_slices make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/interleaved_bad_slices.dir/build.make apps/CMakeFiles/interleaved_bad_slices.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[ 98%] Building CXX object apps/CMakeFiles/interleaved_bad_slices.dir/interleaved_bad_slices.cxx.o -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/interleaved_bad_slices.dir/interleaved_bad_slices.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/interleaved_bad_slices.cxx -[ 99%] Linking CXX executable ../bin/concat_affine -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/concat_affine.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/concat_affine.dir/concat_affine.cxx.o -o ../bin/concat_affine -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so -/build/cmtk-3.3.1p1+dfsg/apps/gregxform.cxx: In function 'int doMain(int, const char**)': -/build/cmtk-3.3.1p1+dfsg/apps/gregxform.cxx:191:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] - 191 | fgets( line, 80, infile ); - | ~~~~~^~~~~~~~~~~~~~~~~~~~ -make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[ 99%] Built target concat_affine -make -f apps/CMakeFiles/statistics.dir/build.make apps/CMakeFiles/statistics.dir/depend -make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/statistics.dir/DependInfo.cmake --color= Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/statistics.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/statistics.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/statistics.dir/depend.internal". +[ 99%] Building CXX object apps/CMakeFiles/interleaved_bad_slices.dir/interleaved_bad_slices.cxx.o +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/interleaved_bad_slices.dir/interleaved_bad_slices.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/interleaved_bad_slices.cxx Scanning dependencies of target statistics make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/statistics.dir/build.make apps/CMakeFiles/statistics.dir/build @@ -4264,86 +4375,41 @@ /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ -[100%] Linking CXX executable ../bin/xform2dfield -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/xform2dfield.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/xform2dfield.dir/xform2dfield.cxx.o -o ../bin/xform2dfield -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so -[100%] Linking CXX executable ../bin/xform2itk -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/xform2itk.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/xform2itk.dir/xform2itk.cxx.o -o ../bin/xform2itk -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so -make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[100%] Built target xform2dfield -[100%] Built target xform2itk -[100%] Linking CXX executable ../bin/probe -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/probe.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/probe.dir/probe.cxx.o -o ../bin/probe -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so -[100%] Linking CXX executable ../bin/mrbias -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/mrbias.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/mrbias.dir/mrbias.cxx.o -o ../bin/mrbias -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so -make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[100%] Built target probe -make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[100%] Built target mrbias +[100%] Linking CXX executable ../bin/epiunwarp +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/epiunwarp.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/epiunwarp.dir/epiunwarp.cxx.o -o ../bin/epiunwarp -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so [100%] Linking CXX executable ../bin/fit_affine_xform_landmarks cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/fit_affine_xform_landmarks.dir/link.txt --verbose=1 -[100%] Linking CXX executable ../bin/reorient -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/reorient.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/fit_affine_xform_landmarks.dir/fit_affine_xform_landmarks.cxx.o -o ../bin/fit_affine_xform_landmarks -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so -/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/reorient.dir/reorient.cxx.o -o ../bin/reorient -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so -[100%] Linking CXX executable ../bin/fit_spline_dfield -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/fit_spline_dfield.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/fit_spline_dfield.dir/fit_spline_dfield.cxx.o -o ../bin/fit_spline_dfield -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[100%] Built target reorient +[100%] Built target epiunwarp make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [100%] Built target fit_affine_xform_landmarks +[100%] Linking CXX executable ../bin/reorient +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/reorient.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/reorient.dir/reorient.cxx.o -o ../bin/reorient -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[100%] Built target fit_spline_dfield -[100%] Linking CXX executable ../bin/gregxform -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/gregxform.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/gregxform.dir/gregxform.cxx.o -o ../bin/gregxform -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so -make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[100%] Built target gregxform -[100%] Linking CXX executable ../bin/warp2ps -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/warp2ps.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/warp2ps.dir/warp2ps.cxx.o -o ../bin/warp2ps -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so -[100%] Linking CXX executable ../bin/interleaved_bad_slices -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/interleaved_bad_slices.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/interleaved_bad_slices.dir/interleaved_bad_slices.cxx.o -o ../bin/interleaved_bad_slices -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so -make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[100%] Built target warp2ps -make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[100%] Built target interleaved_bad_slices -[100%] Linking CXX executable ../bin/regress -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/regress.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/regress.dir/regress.cxx.o -o ../bin/regress -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so +[100%] Built target reorient [100%] Linking CXX executable ../bin/sbai cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/sbai.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/sbai.dir/sbai.cxx.o -o ../bin/sbai -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[100%] Built target regress -[100%] Linking CXX executable ../bin/epiunwarp -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/epiunwarp.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/epiunwarp.dir/epiunwarp.cxx.o -o ../bin/epiunwarp -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so -make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [100%] Built target sbai +[100%] Linking CXX executable ../bin/reformatx +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/reformatx.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/reformatx.dir/reformatx.cxx.o -o ../bin/reformatx -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[100%] Built target epiunwarp +[100%] Built target reformatx [100%] Linking CXX executable ../bin/statistics cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/statistics.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/statistics.dir/statistics.cxx.o -o ../bin/statistics -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [100%] Built target statistics -[100%] Linking CXX executable ../bin/mcwarp -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/mcwarp.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/mcwarp.dir/mcwarp.cxx.o -o ../bin/mcwarp -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so -make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[100%] Built target mcwarp -[100%] Linking CXX executable ../bin/reformatx -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/reformatx.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/reformatx.dir/reformatx.cxx.o -o ../bin/reformatx -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so +[100%] Linking CXX executable ../bin/interleaved_bad_slices +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/interleaved_bad_slices.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/interleaved_bad_slices.dir/interleaved_bad_slices.cxx.o -o ../bin/interleaved_bad_slices -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[100%] Built target reformatx +[100%] Built target interleaved_bad_slices make[2]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_start /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/CMakeFiles 0 make[1]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' @@ -4352,10 +4418,10 @@ make[1]: Entering directory '/build/cmtk-3.3.1p1+dfsg' ARGS=--verbose xvfb-run --auto-servernum --server-num=20 \ dh_auto_test - cd obj-i686-linux-gnu && make -j16 test ARGS\+=-j16 + cd obj-i686-linux-gnu && make -j7 test ARGS\+=-j7 make[2]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' Running tests... -/usr/bin/ctest --force-new-ctest-process --auto-servernum --server-num '20' -- 'dh_auto_test' -j16 +/usr/bin/ctest --force-new-ctest-process --auto-servernum --server-num '20' -- 'dh_auto_test' -j7 Test project /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu No tests were found!!! make[2]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' @@ -4375,7 +4441,7 @@ debian/rules override_dh_auto_install make[1]: Entering directory '/build/cmtk-3.3.1p1+dfsg' dh_auto_install - cd obj-i686-linux-gnu && make -j16 install DESTDIR=/build/cmtk-3.3.1p1\+dfsg/debian/cmtk AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" + cd obj-i686-linux-gnu && make -j7 install DESTDIR=/build/cmtk-3.3.1p1\+dfsg/debian/cmtk AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[2]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' /usr/bin/cmake -S/build/cmtk-3.3.1p1+dfsg -B/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/CMakeFiles /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu//CMakeFiles/progress.marks @@ -4385,10 +4451,10 @@ make -f Utilities/mxml/CMakeFiles/cmtkMxml.dir/build.make Utilities/mxml/CMakeFiles/cmtkMxml.dir/depend make -f libs/Numerics/CMakeFiles/cmtkNumerics.dir/build.make libs/Numerics/CMakeFiles/cmtkNumerics.dir/depend make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/Utilities/mxml /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/mxml /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/mxml/CMakeFiles/cmtkMxml.dir/DependInfo.cmake --color= -make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/Utilities/mxml /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/mxml /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/mxml/CMakeFiles/cmtkMxml.dir/DependInfo.cmake --color= +make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/libs/Numerics /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Numerics /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Numerics/CMakeFiles/cmtkNumerics.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f Utilities/mxml/CMakeFiles/cmtkMxml.dir/build.make Utilities/mxml/CMakeFiles/cmtkMxml.dir/build @@ -4399,18 +4465,18 @@ make -f Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/build.make Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/build make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f libs/Numerics/CMakeFiles/cmtkNumerics.dir/build.make libs/Numerics/CMakeFiles/cmtkNumerics.dir/build +[ 2%] Built target cmtkMxml make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Nothing to be done for 'libs/Numerics/CMakeFiles/cmtkNumerics.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Nothing to be done for 'Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[ 2%] Built target cmtkMxml make -f libs/System/CMakeFiles/cmtkSystem.dir/build.make libs/System/CMakeFiles/cmtkSystem.dir/depend make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/libs/System /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/System /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/System/CMakeFiles/cmtkSystem.dir/DependInfo.cmake --color= -[ 8%] Built target cmtkNumerics [ 16%] Built target NrrdIO +[ 16%] Built target cmtkNumerics make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f libs/System/CMakeFiles/cmtkSystem.dir/build.make libs/System/CMakeFiles/cmtkSystem.dir/build make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' @@ -4466,32 +4532,52 @@ make -f apps/CMakeFiles/dcm2image.dir/build.make apps/CMakeFiles/dcm2image.dir/depend make -f apps/CMakeFiles/asegment_sri24.dir/build.make apps/CMakeFiles/asegment_sri24.dir/depend make -f apps/CMakeFiles/dbtool.dir/build.make apps/CMakeFiles/dbtool.dir/depend -make -f apps/CMakeFiles/warp.dir/build.make apps/CMakeFiles/warp.dir/depend -make -f apps/CMakeFiles/volume_reconstruction.dir/build.make apps/CMakeFiles/volume_reconstruction.dir/depend make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/detect_spheres_matched_filter.dir/DependInfo.cmake --color= -make -f apps/CMakeFiles/volume_injection.dir/build.make apps/CMakeFiles/volume_injection.dir/depend +make -f apps/CMakeFiles/warp.dir/build.make apps/CMakeFiles/warp.dir/depend +make -f apps/CMakeFiles/volume_reconstruction.dir/build.make apps/CMakeFiles/volume_reconstruction.dir/depend make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/dcm2image.dir/DependInfo.cmake --color= -make -f apps/CMakeFiles/unwarp_image_phantom.dir/build.make apps/CMakeFiles/unwarp_image_phantom.dir/depend make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/asegment_sri24.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/dbtool.dir/DependInfo.cmake --color= -make -f apps/CMakeFiles/ttest.dir/build.make apps/CMakeFiles/ttest.dir/depend +make -f apps/CMakeFiles/volume_injection.dir/build.make apps/CMakeFiles/volume_injection.dir/depend make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/warp.dir/DependInfo.cmake --color= -make -f apps/CMakeFiles/sympl.dir/build.make apps/CMakeFiles/sympl.dir/depend -make -f apps/CMakeFiles/streamxform.dir/build.make apps/CMakeFiles/streamxform.dir/depend -make -f apps/CMakeFiles/stream_pixels.dir/build.make apps/CMakeFiles/stream_pixels.dir/depend -make -f apps/CMakeFiles/xform2scalar.dir/build.make apps/CMakeFiles/xform2scalar.dir/depend -make -f apps/CMakeFiles/filter.dir/build.make apps/CMakeFiles/filter.dir/depend -make -f apps/CMakeFiles/asegment.dir/build.make apps/CMakeFiles/asegment.dir/depend -make -f apps/CMakeFiles/fit_spline_xform.dir/build.make apps/CMakeFiles/fit_spline_xform.dir/depend make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/volume_reconstruction.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/volume_injection.dir/DependInfo.cmake --color= +make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +make -f apps/CMakeFiles/dbtool.dir/build.make apps/CMakeFiles/dbtool.dir/build +make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +make -f apps/CMakeFiles/detect_spheres_matched_filter.dir/build.make apps/CMakeFiles/detect_spheres_matched_filter.dir/build +make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +make[4]: Nothing to be done for 'apps/CMakeFiles/dbtool.dir/build'. +make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +make -f apps/CMakeFiles/dcm2image.dir/build.make apps/CMakeFiles/dcm2image.dir/build +make -f apps/CMakeFiles/asegment_sri24.dir/build.make apps/CMakeFiles/asegment_sri24.dir/build +make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +make[4]: Nothing to be done for 'apps/CMakeFiles/detect_spheres_matched_filter.dir/build'. +make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +make[4]: Nothing to be done for 'apps/CMakeFiles/dcm2image.dir/build'. +make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +make -f apps/CMakeFiles/warp.dir/build.make apps/CMakeFiles/warp.dir/build +make -f apps/CMakeFiles/volume_reconstruction.dir/build.make apps/CMakeFiles/volume_reconstruction.dir/build +make -f apps/CMakeFiles/volume_injection.dir/build.make apps/CMakeFiles/volume_injection.dir/build +[ 68%] Built target dbtool +[ 67%] Built target dcm2image +make -f apps/CMakeFiles/unwarp_image_phantom.dir/build.make apps/CMakeFiles/unwarp_image_phantom.dir/depend +make -f apps/CMakeFiles/ttest.dir/build.make apps/CMakeFiles/ttest.dir/depend +[ 69%] Built target detect_spheres_matched_filter +make -f apps/CMakeFiles/sympl.dir/build.make apps/CMakeFiles/sympl.dir/depend make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/unwarp_image_phantom.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' @@ -4499,9 +4585,45 @@ make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/sympl.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +make[4]: Nothing to be done for 'apps/CMakeFiles/asegment_sri24.dir/build'. +make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +make -f apps/CMakeFiles/ttest.dir/build.make apps/CMakeFiles/ttest.dir/build +[ 69%] Built target asegment_sri24 +make -f apps/CMakeFiles/streamxform.dir/build.make apps/CMakeFiles/streamxform.dir/depend +make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +make -f apps/CMakeFiles/unwarp_image_phantom.dir/build.make apps/CMakeFiles/unwarp_image_phantom.dir/build +make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +make[4]: Nothing to be done for 'apps/CMakeFiles/warp.dir/build'. +make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +make[4]: Nothing to be done for 'apps/CMakeFiles/volume_injection.dir/build'. +make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/streamxform.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +make[4]: Nothing to be done for 'apps/CMakeFiles/volume_reconstruction.dir/build'. +make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +make[4]: Nothing to be done for 'apps/CMakeFiles/ttest.dir/build'. +make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +make[4]: Nothing to be done for 'apps/CMakeFiles/unwarp_image_phantom.dir/build'. +make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +make -f apps/CMakeFiles/sympl.dir/build.make apps/CMakeFiles/sympl.dir/build +[ 70%] Built target warp +make -f apps/CMakeFiles/stream_pixels.dir/build.make apps/CMakeFiles/stream_pixels.dir/depend +[ 71%] Built target volume_reconstruction +make -f apps/CMakeFiles/xform2scalar.dir/build.make apps/CMakeFiles/xform2scalar.dir/depend +[ 71%] Built target volume_injection +make -f apps/CMakeFiles/filter.dir/build.make apps/CMakeFiles/filter.dir/depend +[ 72%] Built target ttest +make -f apps/CMakeFiles/asegment.dir/build.make apps/CMakeFiles/asegment.dir/depend +make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/stream_pixels.dir/DependInfo.cmake --color= +[ 73%] Built target unwarp_image_phantom +make -f apps/CMakeFiles/fit_spline_xform.dir/build.make apps/CMakeFiles/fit_spline_xform.dir/depend make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/xform2scalar.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' @@ -4510,704 +4632,648 @@ cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/asegment.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/fit_spline_xform.dir/DependInfo.cmake --color= -make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make -f apps/CMakeFiles/dbtool.dir/build.make apps/CMakeFiles/dbtool.dir/build -make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make -f apps/CMakeFiles/dcm2image.dir/build.make apps/CMakeFiles/dcm2image.dir/build -make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make -f apps/CMakeFiles/detect_spheres_matched_filter.dir/build.make apps/CMakeFiles/detect_spheres_matched_filter.dir/build -make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make -f apps/CMakeFiles/asegment_sri24.dir/build.make apps/CMakeFiles/asegment_sri24.dir/build make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make[4]: Nothing to be done for 'apps/CMakeFiles/dbtool.dir/build'. +make[4]: Nothing to be done for 'apps/CMakeFiles/sympl.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make -f apps/CMakeFiles/unwarp_image_phantom.dir/build.make apps/CMakeFiles/unwarp_image_phantom.dir/build +make -f apps/CMakeFiles/streamxform.dir/build.make apps/CMakeFiles/streamxform.dir/build make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make -f apps/CMakeFiles/warp.dir/build.make apps/CMakeFiles/warp.dir/build make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make -f apps/CMakeFiles/ttest.dir/build.make apps/CMakeFiles/ttest.dir/build -make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make -f apps/CMakeFiles/volume_injection.dir/build.make apps/CMakeFiles/volume_injection.dir/build make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/stream_pixels.dir/build.make apps/CMakeFiles/stream_pixels.dir/build -[ 68%] Built target dbtool -make -f apps/CMakeFiles/filter.dir/build.make apps/CMakeFiles/filter.dir/build make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make -f apps/CMakeFiles/fit_affine_dfield.dir/build.make apps/CMakeFiles/fit_affine_dfield.dir/depend make -f apps/CMakeFiles/xform2scalar.dir/build.make apps/CMakeFiles/xform2scalar.dir/build -make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +make -f apps/CMakeFiles/filter.dir/build.make apps/CMakeFiles/filter.dir/build make -f apps/CMakeFiles/asegment.dir/build.make apps/CMakeFiles/asegment.dir/build -make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make -f apps/CMakeFiles/volume_reconstruction.dir/build.make apps/CMakeFiles/volume_reconstruction.dir/build -make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make -f apps/CMakeFiles/streamxform.dir/build.make apps/CMakeFiles/streamxform.dir/build -make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/fit_spline_xform.dir/build.make apps/CMakeFiles/fit_spline_xform.dir/build +[ 73%] Built target sympl +make -f apps/CMakeFiles/fit_affine_dfield.dir/build.make apps/CMakeFiles/fit_affine_dfield.dir/depend make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/fit_affine_dfield.dir/DependInfo.cmake --color= -make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make -f apps/CMakeFiles/sympl.dir/build.make apps/CMakeFiles/sympl.dir/build make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make[4]: Nothing to be done for 'apps/CMakeFiles/dcm2image.dir/build'. +make[4]: Nothing to be done for 'apps/CMakeFiles/streamxform.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make[4]: Nothing to be done for 'apps/CMakeFiles/detect_spheres_matched_filter.dir/build'. +make[4]: Nothing to be done for 'apps/CMakeFiles/stream_pixels.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make[4]: Nothing to be done for 'apps/CMakeFiles/asegment_sri24.dir/build'. +make[4]: Nothing to be done for 'apps/CMakeFiles/xform2scalar.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make[4]: Nothing to be done for 'apps/CMakeFiles/ttest.dir/build'. +make[4]: Nothing to be done for 'apps/CMakeFiles/filter.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[ 68%] Built target dcm2image -make -f apps/CMakeFiles/fibxform.dir/build.make apps/CMakeFiles/fibxform.dir/depend make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make[4]: Nothing to be done for 'apps/CMakeFiles/unwarp_image_phantom.dir/build'. +make[4]: Nothing to be done for 'apps/CMakeFiles/asegment.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[ 69%] Built target detect_spheres_matched_filter -make -f apps/CMakeFiles/groupwise_affine.dir/build.make apps/CMakeFiles/groupwise_affine.dir/depend make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make[4]: Nothing to be done for 'apps/CMakeFiles/warp.dir/build'. +make[4]: Nothing to be done for 'apps/CMakeFiles/fit_spline_xform.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make[4]: Nothing to be done for 'apps/CMakeFiles/stream_pixels.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +make -f apps/CMakeFiles/fit_affine_dfield.dir/build.make apps/CMakeFiles/fit_affine_dfield.dir/build +[ 74%] Built target streamxform +make -f apps/CMakeFiles/fibxform.dir/build.make apps/CMakeFiles/fibxform.dir/depend +[ 74%] Built target stream_pixels +make -f apps/CMakeFiles/groupwise_affine.dir/build.make apps/CMakeFiles/groupwise_affine.dir/depend +[ 75%] Built target xform2scalar +make -f apps/CMakeFiles/dwi_mask_bad_slices.dir/build.make apps/CMakeFiles/dwi_mask_bad_slices.dir/depend +[ 75%] Built target asegment +make -f apps/CMakeFiles/film.dir/build.make apps/CMakeFiles/film.dir/depend +[ 75%] Built target fit_spline_xform +make -f apps/CMakeFiles/destripe.dir/build.make apps/CMakeFiles/destripe.dir/depend +[ 76%] Built target filter +make -f apps/CMakeFiles/mcaffine.dir/build.make apps/CMakeFiles/mcaffine.dir/depend make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/fibxform.dir/DependInfo.cmake --color= -[ 69%] Built target asegment_sri24 -make -f apps/CMakeFiles/dwi_mask_bad_slices.dir/build.make apps/CMakeFiles/dwi_mask_bad_slices.dir/depend make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/groupwise_affine.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make[4]: Nothing to be done for 'apps/CMakeFiles/filter.dir/build'. -make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/film.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make[4]: Nothing to be done for 'apps/CMakeFiles/asegment.dir/build'. +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/dwi_mask_bad_slices.dir/DependInfo.cmake --color= +make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/destripe.dir/DependInfo.cmake --color= +make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/mcaffine.dir/DependInfo.cmake --color= +make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +make[4]: Nothing to be done for 'apps/CMakeFiles/fit_affine_dfield.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +[ 76%] Built target fit_affine_dfield +make -f apps/CMakeFiles/sba.dir/build.make apps/CMakeFiles/sba.dir/depend make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make[4]: Nothing to be done for 'apps/CMakeFiles/volume_injection.dir/build'. +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/sba.dir/DependInfo.cmake --color= +make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +make -f apps/CMakeFiles/dwi_mask_bad_slices.dir/build.make apps/CMakeFiles/dwi_mask_bad_slices.dir/build +make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make[4]: Nothing to be done for 'apps/CMakeFiles/xform2scalar.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make -f apps/CMakeFiles/fit_affine_dfield.dir/build.make apps/CMakeFiles/fit_affine_dfield.dir/build -make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make[4]: Nothing to be done for 'apps/CMakeFiles/streamxform.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +make -f apps/CMakeFiles/fibxform.dir/build.make apps/CMakeFiles/fibxform.dir/build +make -f apps/CMakeFiles/groupwise_affine.dir/build.make apps/CMakeFiles/groupwise_affine.dir/build +make -f apps/CMakeFiles/film.dir/build.make apps/CMakeFiles/film.dir/build +make -f apps/CMakeFiles/destripe.dir/build.make apps/CMakeFiles/destripe.dir/build +make -f apps/CMakeFiles/mcaffine.dir/build.make apps/CMakeFiles/mcaffine.dir/build +make -f apps/CMakeFiles/sba.dir/build.make apps/CMakeFiles/sba.dir/build make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/dwi_mask_bad_slices.dir/DependInfo.cmake --color= -[ 70%] Built target ttest -[ 72%] Built target warp -[ 72%] Built target unwarp_image_phantom -make -f apps/CMakeFiles/film.dir/build.make apps/CMakeFiles/film.dir/depend -make -f apps/CMakeFiles/destripe.dir/build.make apps/CMakeFiles/destripe.dir/depend -make -f apps/CMakeFiles/mcaffine.dir/build.make apps/CMakeFiles/mcaffine.dir/depend +make[4]: Nothing to be done for 'apps/CMakeFiles/dwi_mask_bad_slices.dir/build'. +make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make[4]: Nothing to be done for 'apps/CMakeFiles/fit_spline_xform.dir/build'. +make[4]: Nothing to be done for 'apps/CMakeFiles/fibxform.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[ 72%] Built target stream_pixels -make -f apps/CMakeFiles/sba.dir/build.make apps/CMakeFiles/sba.dir/depend make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/film.dir/DependInfo.cmake --color= +make[4]: Nothing to be done for 'apps/CMakeFiles/sba.dir/build'. +make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/destripe.dir/DependInfo.cmake --color= +make[4]: Nothing to be done for 'apps/CMakeFiles/destripe.dir/build'. +make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/mcaffine.dir/DependInfo.cmake --color= +make[4]: Nothing to be done for 'apps/CMakeFiles/film.dir/build'. +make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make[4]: Nothing to be done for 'apps/CMakeFiles/volume_reconstruction.dir/build'. +make[4]: Nothing to be done for 'apps/CMakeFiles/groupwise_affine.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/sba.dir/DependInfo.cmake --color= -[ 73%] Built target filter +make[4]: Nothing to be done for 'apps/CMakeFiles/mcaffine.dir/build'. +make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +[ 77%] Built target dwi_mask_bad_slices make -f apps/CMakeFiles/dof2mat.dir/build.make apps/CMakeFiles/dof2mat.dir/depend -[ 73%] Built target volume_injection +[ 78%] Built target fibxform make -f apps/CMakeFiles/histogram.dir/build.make apps/CMakeFiles/histogram.dir/depend -[ 74%] Built target xform2scalar -[ 74%] Built target asegment +[ 78%] Built target groupwise_affine make -f apps/CMakeFiles/groupwise_init.dir/build.make apps/CMakeFiles/groupwise_init.dir/depend -make -f apps/CMakeFiles/mk_phantom_3d.dir/build.make apps/CMakeFiles/mk_phantom_3d.dir/depend -[ 75%] Built target streamxform -make -f apps/CMakeFiles/glm.dir/build.make apps/CMakeFiles/glm.dir/depend -[ 75%] Built target fit_spline_xform -make -f apps/CMakeFiles/avg_adm.dir/build.make apps/CMakeFiles/avg_adm.dir/depend make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/dof2mat.dir/DependInfo.cmake --color= +[ 78%] Built target film +make -f apps/CMakeFiles/mk_phantom_3d.dir/build.make apps/CMakeFiles/mk_phantom_3d.dir/depend +[ 79%] Built target sba +[ 79%] Built target destripe make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/histogram.dir/DependInfo.cmake --color= -[ 76%] Built target volume_reconstruction +[ 79%] Built target mcaffine +make -f apps/CMakeFiles/glm.dir/build.make apps/CMakeFiles/glm.dir/depend +make -f apps/CMakeFiles/avg_adm.dir/build.make apps/CMakeFiles/avg_adm.dir/depend make -f apps/CMakeFiles/lsba.dir/build.make apps/CMakeFiles/lsba.dir/depend make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/mk_phantom_3d.dir/DependInfo.cmake --color= -make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/groupwise_init.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/glm.dir/DependInfo.cmake --color= +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/mk_phantom_3d.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/avg_adm.dir/DependInfo.cmake --color= +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/glm.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/lsba.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make[4]: Nothing to be done for 'apps/CMakeFiles/sympl.dir/build'. -make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[ 76%] Built target sympl -make -f apps/CMakeFiles/pxsearch.dir/build.make apps/CMakeFiles/pxsearch.dir/depend -make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/pxsearch.dir/DependInfo.cmake --color= -make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make -f apps/CMakeFiles/fibxform.dir/build.make apps/CMakeFiles/fibxform.dir/build -make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make[4]: Nothing to be done for 'apps/CMakeFiles/fit_affine_dfield.dir/build'. -make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make -f apps/CMakeFiles/dwi_mask_bad_slices.dir/build.make apps/CMakeFiles/dwi_mask_bad_slices.dir/build -make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make -f apps/CMakeFiles/destripe.dir/build.make apps/CMakeFiles/destripe.dir/build -make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make -f apps/CMakeFiles/sba.dir/build.make apps/CMakeFiles/sba.dir/build +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/avg_adm.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/dof2mat.dir/build.make apps/CMakeFiles/dof2mat.dir/build -[ 76%] Built target fit_affine_dfield -make -f apps/CMakeFiles/split.dir/build.make apps/CMakeFiles/split.dir/depend make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make -f apps/CMakeFiles/groupwise_affine.dir/build.make apps/CMakeFiles/groupwise_affine.dir/build +make -f apps/CMakeFiles/histogram.dir/build.make apps/CMakeFiles/histogram.dir/build make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make -f apps/CMakeFiles/film.dir/build.make apps/CMakeFiles/film.dir/build -make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/split.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make -f apps/CMakeFiles/histogram.dir/build.make apps/CMakeFiles/histogram.dir/build make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/mk_phantom_3d.dir/build.make apps/CMakeFiles/mk_phantom_3d.dir/build make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make -f apps/CMakeFiles/glm.dir/build.make apps/CMakeFiles/glm.dir/build make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make -f apps/CMakeFiles/mcaffine.dir/build.make apps/CMakeFiles/mcaffine.dir/build +make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +make[4]: Nothing to be done for 'apps/CMakeFiles/dof2mat.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +make[4]: Nothing to be done for 'apps/CMakeFiles/histogram.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/groupwise_init.dir/build.make apps/CMakeFiles/groupwise_init.dir/build -make -f apps/CMakeFiles/lsba.dir/build.make apps/CMakeFiles/lsba.dir/build -make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +make -f apps/CMakeFiles/glm.dir/build.make apps/CMakeFiles/glm.dir/build make -f apps/CMakeFiles/avg_adm.dir/build.make apps/CMakeFiles/avg_adm.dir/build -make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make -f apps/CMakeFiles/pxsearch.dir/build.make apps/CMakeFiles/pxsearch.dir/build +make -f apps/CMakeFiles/lsba.dir/build.make apps/CMakeFiles/lsba.dir/build +[ 79%] Built target dof2mat +[ 79%] Built target histogram +make -f apps/CMakeFiles/pxsearch.dir/build.make apps/CMakeFiles/pxsearch.dir/depend +make -f apps/CMakeFiles/split.dir/build.make apps/CMakeFiles/split.dir/depend make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make[4]: Nothing to be done for 'apps/CMakeFiles/fibxform.dir/build'. +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/pxsearch.dir/DependInfo.cmake --color= +make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/split.dir/DependInfo.cmake --color= +make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +make[4]: Nothing to be done for 'apps/CMakeFiles/mk_phantom_3d.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make[4]: Nothing to be done for 'apps/CMakeFiles/dwi_mask_bad_slices.dir/build'. +make[4]: Nothing to be done for 'apps/CMakeFiles/lsba.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make[4]: Nothing to be done for 'apps/CMakeFiles/destripe.dir/build'. +make[4]: Nothing to be done for 'apps/CMakeFiles/groupwise_init.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make[4]: Nothing to be done for 'apps/CMakeFiles/dof2mat.dir/build'. +make[4]: Nothing to be done for 'apps/CMakeFiles/glm.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[ 77%] Built target fibxform make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make[4]: Nothing to be done for 'apps/CMakeFiles/sba.dir/build'. +make[4]: Nothing to be done for 'apps/CMakeFiles/avg_adm.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +[ 79%] Built target mk_phantom_3d make -f apps/CMakeFiles/gmm.dir/build.make apps/CMakeFiles/gmm.dir/depend -make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/gmm.dir/DependInfo.cmake --color= -[ 78%] Built target dwi_mask_bad_slices +[ 79%] Built target lsba make -f apps/CMakeFiles/vtkxform.dir/build.make apps/CMakeFiles/vtkxform.dir/depend -[ 78%] Built target destripe +[ 80%] Built target groupwise_init make -f apps/CMakeFiles/fit_affine_xform.dir/build.make apps/CMakeFiles/fit_affine_xform.dir/depend -make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[ 78%] Built target dof2mat -make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make[4]: Nothing to be done for 'apps/CMakeFiles/histogram.dir/build'. -make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make -f apps/CMakeFiles/split.dir/build.make apps/CMakeFiles/split.dir/build -[ 79%] Built target sba -make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/vtkxform.dir/DependInfo.cmake --color= +[ 80%] Built target glm make -f apps/CMakeFiles/detect_adni_phantom.dir/build.make apps/CMakeFiles/detect_adni_phantom.dir/depend +[ 80%] Built target avg_adm make -f apps/CMakeFiles/average_images.dir/build.make apps/CMakeFiles/average_images.dir/depend make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make[4]: Nothing to be done for 'apps/CMakeFiles/mk_phantom_3d.dir/build'. -make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/fit_affine_xform.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/average_images.dir/DependInfo.cmake --color= +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/vtkxform.dir/DependInfo.cmake --color= +make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/gmm.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/detect_adni_phantom.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make[4]: Nothing to be done for 'apps/CMakeFiles/glm.dir/build'. +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/average_images.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make[4]: Nothing to be done for 'apps/CMakeFiles/film.dir/build'. +make -f apps/CMakeFiles/pxsearch.dir/build.make apps/CMakeFiles/pxsearch.dir/build make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make[4]: Nothing to be done for 'apps/CMakeFiles/lsba.dir/build'. +make -f apps/CMakeFiles/split.dir/build.make apps/CMakeFiles/split.dir/build +make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +make -f apps/CMakeFiles/gmm.dir/build.make apps/CMakeFiles/gmm.dir/build +make -f apps/CMakeFiles/detect_adni_phantom.dir/build.make apps/CMakeFiles/detect_adni_phantom.dir/build +make -f apps/CMakeFiles/average_images.dir/build.make apps/CMakeFiles/average_images.dir/build make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +make -f apps/CMakeFiles/vtkxform.dir/build.make apps/CMakeFiles/vtkxform.dir/build +make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +make -f apps/CMakeFiles/fit_affine_xform.dir/build.make apps/CMakeFiles/fit_affine_xform.dir/build make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make[4]: Nothing to be done for 'apps/CMakeFiles/groupwise_affine.dir/build'. +make[4]: Nothing to be done for 'apps/CMakeFiles/pxsearch.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[ 79%] Built target histogram -[ 79%] Built target mk_phantom_3d -make -f apps/CMakeFiles/geomatch.dir/build.make apps/CMakeFiles/geomatch.dir/depend -make -f apps/CMakeFiles/vol2csv.dir/build.make apps/CMakeFiles/vol2csv.dir/depend make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make[4]: Nothing to be done for 'apps/CMakeFiles/groupwise_init.dir/build'. +make[4]: Nothing to be done for 'apps/CMakeFiles/gmm.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/geomatch.dir/DependInfo.cmake --color= +make[4]: Nothing to be done for 'apps/CMakeFiles/average_images.dir/build'. +make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/vol2csv.dir/DependInfo.cmake --color= +make[4]: Nothing to be done for 'apps/CMakeFiles/detect_adni_phantom.dir/build'. +make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make[4]: Nothing to be done for 'apps/CMakeFiles/pxsearch.dir/build'. +make[4]: Nothing to be done for 'apps/CMakeFiles/split.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[ 79%] Built target glm -[ 79%] Built target film +[ 81%] Built target average_images +[ 81%] Built target gmm +[ 81%] Built target detect_adni_phantom +[ 80%] Built target pxsearch +make -f apps/CMakeFiles/geomatch.dir/build.make apps/CMakeFiles/geomatch.dir/depend +make -f apps/CMakeFiles/vol2csv.dir/build.make apps/CMakeFiles/vol2csv.dir/depend make -f apps/CMakeFiles/imagemath.dir/build.make apps/CMakeFiles/imagemath.dir/depend make -f apps/CMakeFiles/groupwise_warp.dir/build.make apps/CMakeFiles/groupwise_warp.dir/depend -[ 79%] Built target lsba +[ 81%] Built target split make -f apps/CMakeFiles/lvote.dir/build.make apps/CMakeFiles/lvote.dir/depend make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make[4]: Nothing to be done for 'apps/CMakeFiles/mcaffine.dir/build'. -make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/geomatch.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/imagemath.dir/DependInfo.cmake --color= +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/vol2csv.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/groupwise_warp.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make[4]: Nothing to be done for 'apps/CMakeFiles/avg_adm.dir/build'. -make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[ 79%] Built target groupwise_affine -make -f apps/CMakeFiles/convertx.dir/build.make apps/CMakeFiles/convertx.dir/depend +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/imagemath.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/lvote.dir/DependInfo.cmake --color= -[ 80%] Built target groupwise_init -make -f apps/CMakeFiles/symplx.dir/build.make apps/CMakeFiles/symplx.dir/depend make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/convertx.dir/DependInfo.cmake --color= -[ 80%] Built target pxsearch -make -f apps/CMakeFiles/average_affine.dir/build.make apps/CMakeFiles/average_affine.dir/depend -make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/symplx.dir/DependInfo.cmake --color= -[ 80%] Built target mcaffine -make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/average_affine.dir/DependInfo.cmake --color= -[ 80%] Built target avg_adm -make -f apps/CMakeFiles/mcwarp.dir/build.make apps/CMakeFiles/mcwarp.dir/depend +make[4]: Nothing to be done for 'apps/CMakeFiles/vtkxform.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make -f apps/CMakeFiles/gmm.dir/build.make apps/CMakeFiles/gmm.dir/build -make -f apps/CMakeFiles/average_labels.dir/build.make apps/CMakeFiles/average_labels.dir/depend make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/mcwarp.dir/DependInfo.cmake --color= +make[4]: Nothing to be done for 'apps/CMakeFiles/fit_affine_xform.dir/build'. +make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +[ 81%] Built target vtkxform +make -f apps/CMakeFiles/convertx.dir/build.make apps/CMakeFiles/convertx.dir/depend +[ 81%] Built target fit_affine_xform +make -f apps/CMakeFiles/symplx.dir/build.make apps/CMakeFiles/symplx.dir/depend make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/average_labels.dir/DependInfo.cmake --color= +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/convertx.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make[4]: Nothing to be done for 'apps/CMakeFiles/split.dir/build'. +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/symplx.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make -f apps/CMakeFiles/vtkxform.dir/build.make apps/CMakeFiles/vtkxform.dir/build +make -f apps/CMakeFiles/geomatch.dir/build.make apps/CMakeFiles/geomatch.dir/build make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make -f apps/CMakeFiles/average_images.dir/build.make apps/CMakeFiles/average_images.dir/build make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make -f apps/CMakeFiles/fit_affine_xform.dir/build.make apps/CMakeFiles/fit_affine_xform.dir/build make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make -f apps/CMakeFiles/detect_adni_phantom.dir/build.make apps/CMakeFiles/detect_adni_phantom.dir/build -[ 80%] Built target split -make -f apps/CMakeFiles/convert_warp.dir/build.make apps/CMakeFiles/convert_warp.dir/depend -make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/convert_warp.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/vol2csv.dir/build.make apps/CMakeFiles/vol2csv.dir/build make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make -f apps/CMakeFiles/geomatch.dir/build.make apps/CMakeFiles/geomatch.dir/build -make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/imagemath.dir/build.make apps/CMakeFiles/imagemath.dir/build -make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +make -f apps/CMakeFiles/groupwise_warp.dir/build.make apps/CMakeFiles/groupwise_warp.dir/build make -f apps/CMakeFiles/lvote.dir/build.make apps/CMakeFiles/lvote.dir/build -make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +make -f apps/CMakeFiles/convertx.dir/build.make apps/CMakeFiles/convertx.dir/build make -f apps/CMakeFiles/symplx.dir/build.make apps/CMakeFiles/symplx.dir/build make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make[4]: Nothing to be done for 'apps/CMakeFiles/gmm.dir/build'. +make[4]: Nothing to be done for 'apps/CMakeFiles/geomatch.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +make[4]: Nothing to be done for 'apps/CMakeFiles/convertx.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make -f apps/CMakeFiles/average_affine.dir/build.make apps/CMakeFiles/average_affine.dir/build +make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +make[4]: Nothing to be done for 'apps/CMakeFiles/symplx.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make -f apps/CMakeFiles/groupwise_warp.dir/build.make apps/CMakeFiles/groupwise_warp.dir/build +make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +make[4]: Nothing to be done for 'apps/CMakeFiles/imagemath.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make -f apps/CMakeFiles/average_labels.dir/build.make apps/CMakeFiles/average_labels.dir/build +make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +make[4]: Nothing to be done for 'apps/CMakeFiles/lvote.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make -f apps/CMakeFiles/convertx.dir/build.make apps/CMakeFiles/convertx.dir/build -[ 81%] Built target gmm -make -f apps/CMakeFiles/make_initial_affine.dir/build.make apps/CMakeFiles/make_initial_affine.dir/depend make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make[4]: Nothing to be done for 'apps/CMakeFiles/vtkxform.dir/build'. +make[4]: Nothing to be done for 'apps/CMakeFiles/vol2csv.dir/build'. +make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +make[4]: Nothing to be done for 'apps/CMakeFiles/groupwise_warp.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +[ 81%] Built target convertx +[ 81%] Built target symplx +[ 81%] Built target imagemath +[ 81%] Built target vol2csv +[ 81%] Built target groupwise_warp +[ 82%] Built target lvote +[ 83%] Built target geomatch +make -f apps/CMakeFiles/average_affine.dir/build.make apps/CMakeFiles/average_affine.dir/depend +make -f apps/CMakeFiles/mcwarp.dir/build.make apps/CMakeFiles/mcwarp.dir/depend +make -f apps/CMakeFiles/average_labels.dir/build.make apps/CMakeFiles/average_labels.dir/depend +make -f apps/CMakeFiles/convert_warp.dir/build.make apps/CMakeFiles/convert_warp.dir/depend +make -f apps/CMakeFiles/make_initial_affine.dir/build.make apps/CMakeFiles/make_initial_affine.dir/depend +make -f apps/CMakeFiles/hausdorff.dir/build.make apps/CMakeFiles/hausdorff.dir/depend +make -f apps/CMakeFiles/describe.dir/build.make apps/CMakeFiles/describe.dir/depend +make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/average_affine.dir/DependInfo.cmake --color= +make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/mcwarp.dir/DependInfo.cmake --color= +make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/average_labels.dir/DependInfo.cmake --color= +make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/convert_warp.dir/DependInfo.cmake --color= +make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/hausdorff.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/make_initial_affine.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make[4]: Nothing to be done for 'apps/CMakeFiles/average_images.dir/build'. +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/describe.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make[4]: Nothing to be done for 'apps/CMakeFiles/fit_affine_xform.dir/build'. +make -f apps/CMakeFiles/hausdorff.dir/build.make apps/CMakeFiles/hausdorff.dir/build make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make[4]: Nothing to be done for 'apps/CMakeFiles/detect_adni_phantom.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +make -f apps/CMakeFiles/average_affine.dir/build.make apps/CMakeFiles/average_affine.dir/build make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make -f apps/CMakeFiles/mcwarp.dir/build.make apps/CMakeFiles/mcwarp.dir/build -[ 81%] Built target vtkxform -make -f apps/CMakeFiles/hausdorff.dir/build.make apps/CMakeFiles/hausdorff.dir/depend -[ 81%] Built target average_images make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +make -f apps/CMakeFiles/average_labels.dir/build.make apps/CMakeFiles/average_labels.dir/build +make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +make -f apps/CMakeFiles/mcwarp.dir/build.make apps/CMakeFiles/mcwarp.dir/build make -f apps/CMakeFiles/convert_warp.dir/build.make apps/CMakeFiles/convert_warp.dir/build -make -f apps/CMakeFiles/describe.dir/build.make apps/CMakeFiles/describe.dir/depend -[ 81%] Built target fit_affine_xform +make -f apps/CMakeFiles/make_initial_affine.dir/build.make apps/CMakeFiles/make_initial_affine.dir/build make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/hausdorff.dir/DependInfo.cmake --color= -make -f apps/CMakeFiles/jidb.dir/build.make apps/CMakeFiles/jidb.dir/depend +make[4]: Nothing to be done for 'apps/CMakeFiles/hausdorff.dir/build'. +make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make[4]: Nothing to be done for 'apps/CMakeFiles/vol2csv.dir/build'. +make[4]: Nothing to be done for 'apps/CMakeFiles/average_affine.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[ 81%] Built target detect_adni_phantom +make -f apps/CMakeFiles/describe.dir/build.make apps/CMakeFiles/describe.dir/build make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make[4]: Nothing to be done for 'apps/CMakeFiles/geomatch.dir/build'. +make[4]: Nothing to be done for 'apps/CMakeFiles/average_labels.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make -f apps/CMakeFiles/mk_nifti_hdr.dir/build.make apps/CMakeFiles/mk_nifti_hdr.dir/depend make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/describe.dir/DependInfo.cmake --color= +make[4]: Nothing to be done for 'apps/CMakeFiles/mcwarp.dir/build'. +make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/jidb.dir/DependInfo.cmake --color= +make[4]: Nothing to be done for 'apps/CMakeFiles/convert_warp.dir/build'. +make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/mk_nifti_hdr.dir/DependInfo.cmake --color= -[ 81%] Built target vol2csv +make[4]: Nothing to be done for 'apps/CMakeFiles/make_initial_affine.dir/build'. +make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make[4]: Nothing to be done for 'apps/CMakeFiles/lvote.dir/build'. +make[4]: Nothing to be done for 'apps/CMakeFiles/describe.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +[ 84%] Built target average_labels +make -f apps/CMakeFiles/jidb.dir/build.make apps/CMakeFiles/jidb.dir/depend +[ 85%] Built target hausdorff +make -f apps/CMakeFiles/mk_nifti_hdr.dir/build.make apps/CMakeFiles/mk_nifti_hdr.dir/depend +[ 86%] Built target average_affine +[ 86%] Built target mcwarp +[ 86%] Built target convert_warp +[ 86%] Built target make_initial_affine +[ 87%] Built target describe make -f apps/CMakeFiles/levelset.dir/build.make apps/CMakeFiles/levelset.dir/depend make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make[4]: Nothing to be done for 'apps/CMakeFiles/imagemath.dir/build'. -make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[ 82%] Built target geomatch +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/jidb.dir/DependInfo.cmake --color= make -f apps/CMakeFiles/warpx.dir/build.make apps/CMakeFiles/warpx.dir/depend +make -f apps/CMakeFiles/unsplit.dir/build.make apps/CMakeFiles/unsplit.dir/depend +make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/mk_nifti_hdr.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/levelset.dir/DependInfo.cmake --color= +make -f apps/CMakeFiles/lmsba.dir/build.make apps/CMakeFiles/lmsba.dir/depend +make -f apps/CMakeFiles/similarity.dir/build.make apps/CMakeFiles/similarity.dir/depend make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/warpx.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make[4]: Nothing to be done for 'apps/CMakeFiles/symplx.dir/build'. -make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[ 83%] Built target lvote -make -f apps/CMakeFiles/unsplit.dir/build.make apps/CMakeFiles/unsplit.dir/depend -[ 83%] Built target imagemath -make -f apps/CMakeFiles/lmsba.dir/build.make apps/CMakeFiles/lmsba.dir/depend -make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/unsplit.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make[4]: Nothing to be done for 'apps/CMakeFiles/average_affine.dir/build'. -make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/lmsba.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make[4]: Nothing to be done for 'apps/CMakeFiles/average_labels.dir/build'. +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/similarity.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/lmsba.dir/DependInfo.cmake --color= -[ 83%] Built target symplx -make -f apps/CMakeFiles/similarity.dir/build.make apps/CMakeFiles/similarity.dir/depend +make -f apps/CMakeFiles/mk_nifti_hdr.dir/build.make apps/CMakeFiles/mk_nifti_hdr.dir/build make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make -f apps/CMakeFiles/make_initial_affine.dir/build.make apps/CMakeFiles/make_initial_affine.dir/build +make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +make -f apps/CMakeFiles/levelset.dir/build.make apps/CMakeFiles/levelset.dir/build +make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +make -f apps/CMakeFiles/jidb.dir/build.make apps/CMakeFiles/jidb.dir/build +make -f apps/CMakeFiles/warpx.dir/build.make apps/CMakeFiles/warpx.dir/build +make -f apps/CMakeFiles/unsplit.dir/build.make apps/CMakeFiles/unsplit.dir/build +make -f apps/CMakeFiles/lmsba.dir/build.make apps/CMakeFiles/lmsba.dir/build +make -f apps/CMakeFiles/similarity.dir/build.make apps/CMakeFiles/similarity.dir/build make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/similarity.dir/DependInfo.cmake --color= -[ 84%] Built target average_affine -[ 85%] Built target average_labels +make[4]: Nothing to be done for 'apps/CMakeFiles/mk_nifti_hdr.dir/build'. +make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +[ 88%] Built target mk_nifti_hdr make -f apps/CMakeFiles/sequence.dir/build.make apps/CMakeFiles/sequence.dir/depend -make -f apps/CMakeFiles/mat2dof.dir/build.make apps/CMakeFiles/mat2dof.dir/depend make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/sequence.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/mat2dof.dir/DependInfo.cmake --color= -make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make[4]: Nothing to be done for 'apps/CMakeFiles/groupwise_warp.dir/build'. +make[4]: Nothing to be done for 'apps/CMakeFiles/levelset.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make[4]: Nothing to be done for 'apps/CMakeFiles/convertx.dir/build'. +make[4]: Nothing to be done for 'apps/CMakeFiles/unsplit.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +make[4]: Nothing to be done for 'apps/CMakeFiles/lmsba.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +make[4]: Nothing to be done for 'apps/CMakeFiles/similarity.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make -f apps/CMakeFiles/mk_nifti_hdr.dir/build.make apps/CMakeFiles/mk_nifti_hdr.dir/build -make -f apps/CMakeFiles/hausdorff.dir/build.make apps/CMakeFiles/hausdorff.dir/build make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make[4]: Nothing to be done for 'apps/CMakeFiles/convert_warp.dir/build'. +make[4]: Nothing to be done for 'apps/CMakeFiles/warpx.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +make[4]: Nothing to be done for 'apps/CMakeFiles/jidb.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make -f apps/CMakeFiles/describe.dir/build.make apps/CMakeFiles/describe.dir/build -[ 85%] Built target groupwise_warp +[ 89%] Built target levelset +make -f apps/CMakeFiles/mat2dof.dir/build.make apps/CMakeFiles/mat2dof.dir/depend +[ 89%] Built target jidb make -f apps/CMakeFiles/mk_adni_phantom.dir/build.make apps/CMakeFiles/mk_adni_phantom.dir/depend -[ 85%] Built target convertx +[ 89%] Built target unsplit make -f apps/CMakeFiles/registrationx.dir/build.make apps/CMakeFiles/registrationx.dir/depend +[ 89%] Built target warpx +make -f apps/CMakeFiles/mk_analyze_hdr.dir/build.make apps/CMakeFiles/mk_analyze_hdr.dir/depend +[ 89%] Built target lmsba +make -f apps/CMakeFiles/fib2image.dir/build.make apps/CMakeFiles/fib2image.dir/depend +[ 89%] Built target similarity +make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/mat2dof.dir/DependInfo.cmake --color= +make -f apps/CMakeFiles/mrbias.dir/build.make apps/CMakeFiles/mrbias.dir/depend make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/mk_adni_phantom.dir/DependInfo.cmake --color= -[ 85%] Built target convert_warp -make -f apps/CMakeFiles/mk_analyze_hdr.dir/build.make apps/CMakeFiles/mk_analyze_hdr.dir/depend make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/registrationx.dir/DependInfo.cmake --color= -make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make -f apps/CMakeFiles/jidb.dir/build.make apps/CMakeFiles/jidb.dir/build make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/mk_analyze_hdr.dir/DependInfo.cmake --color= -make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make[4]: Nothing to be done for 'apps/CMakeFiles/mcwarp.dir/build'. -make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make -f apps/CMakeFiles/levelset.dir/build.make apps/CMakeFiles/levelset.dir/build -make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make -f apps/CMakeFiles/warpx.dir/build.make apps/CMakeFiles/warpx.dir/build make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/sequence.dir/build.make apps/CMakeFiles/sequence.dir/build -make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make -f apps/CMakeFiles/unsplit.dir/build.make apps/CMakeFiles/unsplit.dir/build -[ 85%] Built target mcwarp -make -f apps/CMakeFiles/fib2image.dir/build.make apps/CMakeFiles/fib2image.dir/depend -make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make -f apps/CMakeFiles/lmsba.dir/build.make apps/CMakeFiles/lmsba.dir/build make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/fib2image.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make[4]: Nothing to be done for 'apps/CMakeFiles/make_initial_affine.dir/build'. -make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/mrbias.dir/DependInfo.cmake --color= +make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +make[4]: Nothing to be done for 'apps/CMakeFiles/sequence.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make -f apps/CMakeFiles/similarity.dir/build.make apps/CMakeFiles/similarity.dir/build +[ 90%] Built target sequence +make -f apps/CMakeFiles/overlap.dir/build.make apps/CMakeFiles/overlap.dir/depend make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make[4]: Nothing to be done for 'apps/CMakeFiles/mk_nifti_hdr.dir/build'. +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/overlap.dir/DependInfo.cmake --color= +make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +make -f apps/CMakeFiles/mk_analyze_hdr.dir/build.make apps/CMakeFiles/mk_analyze_hdr.dir/build make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +make -f apps/CMakeFiles/mk_adni_phantom.dir/build.make apps/CMakeFiles/mk_adni_phantom.dir/build make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/mat2dof.dir/build.make apps/CMakeFiles/mat2dof.dir/build -[ 85%] Built target make_initial_affine make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make -f apps/CMakeFiles/mk_analyze_hdr.dir/build.make apps/CMakeFiles/mk_analyze_hdr.dir/build -make -f apps/CMakeFiles/mrbias.dir/build.make apps/CMakeFiles/mrbias.dir/depend -make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make[4]: Nothing to be done for 'apps/CMakeFiles/hausdorff.dir/build'. +make -f apps/CMakeFiles/fib2image.dir/build.make apps/CMakeFiles/fib2image.dir/build make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make[4]: Nothing to be done for 'apps/CMakeFiles/describe.dir/build'. +make -f apps/CMakeFiles/registrationx.dir/build.make apps/CMakeFiles/registrationx.dir/build make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/mrbias.dir/DependInfo.cmake --color= -[ 86%] Built target mk_nifti_hdr -make -f apps/CMakeFiles/overlap.dir/build.make apps/CMakeFiles/overlap.dir/depend +make -f apps/CMakeFiles/overlap.dir/build.make apps/CMakeFiles/overlap.dir/build make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make -f apps/CMakeFiles/mk_adni_phantom.dir/build.make apps/CMakeFiles/mk_adni_phantom.dir/build -[ 87%] Built target hausdorff -make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/overlap.dir/DependInfo.cmake --color= +make -f apps/CMakeFiles/mrbias.dir/build.make apps/CMakeFiles/mrbias.dir/build make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make[4]: Nothing to be done for 'apps/CMakeFiles/sequence.dir/build'. +make[4]: Nothing to be done for 'apps/CMakeFiles/mk_analyze_hdr.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +[ 90%] Built target mk_analyze_hdr make -f apps/CMakeFiles/xform2dfield.dir/build.make apps/CMakeFiles/xform2dfield.dir/depend -[ 88%] Built target describe make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/xform2dfield.dir/DependInfo.cmake --color= -make -f apps/CMakeFiles/concat_affine.dir/build.make apps/CMakeFiles/concat_affine.dir/depend -make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make -f apps/CMakeFiles/registrationx.dir/build.make apps/CMakeFiles/registrationx.dir/build -make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/concat_affine.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make[4]: Nothing to be done for 'apps/CMakeFiles/levelset.dir/build'. +make[4]: Nothing to be done for 'apps/CMakeFiles/mk_adni_phantom.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[ 89%] Built target sequence make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make[4]: Nothing to be done for 'apps/CMakeFiles/jidb.dir/build'. +make[4]: Nothing to be done for 'apps/CMakeFiles/fib2image.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make -f apps/CMakeFiles/probe.dir/build.make apps/CMakeFiles/probe.dir/depend make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make[4]: Nothing to be done for 'apps/CMakeFiles/unsplit.dir/build'. +make[4]: Nothing to be done for 'apps/CMakeFiles/mat2dof.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +[ 91%] Built target mk_adni_phantom +make -f apps/CMakeFiles/concat_affine.dir/build.make apps/CMakeFiles/concat_affine.dir/depend make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/probe.dir/DependInfo.cmake --color= -make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make[4]: Nothing to be done for 'apps/CMakeFiles/warpx.dir/build'. +make[4]: Nothing to be done for 'apps/CMakeFiles/overlap.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make[4]: Nothing to be done for 'apps/CMakeFiles/lmsba.dir/build'. -make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +make[4]: Nothing to be done for 'apps/CMakeFiles/registrationx.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make -f apps/CMakeFiles/fib2image.dir/build.make apps/CMakeFiles/fib2image.dir/build make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make[4]: Nothing to be done for 'apps/CMakeFiles/mk_analyze_hdr.dir/build'. +make[4]: Nothing to be done for 'apps/CMakeFiles/mrbias.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[ 90%] Built target levelset +make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/concat_affine.dir/DependInfo.cmake --color= +[ 91%] Built target fib2image +make -f apps/CMakeFiles/probe.dir/build.make apps/CMakeFiles/probe.dir/depend +[ 92%] Built target mat2dof make -f apps/CMakeFiles/reformatx.dir/build.make apps/CMakeFiles/reformatx.dir/depend -[ 90%] Built target jidb +[ 93%] Built target overlap make -f apps/CMakeFiles/xform2itk.dir/build.make apps/CMakeFiles/xform2itk.dir/depend -[ 90%] Built target unsplit +[ 94%] Built target registrationx +make -f apps/CMakeFiles/registration.dir/build.make apps/CMakeFiles/registration.dir/depend +[ 94%] Built target mrbias +make -f apps/CMakeFiles/warp2ps.dir/build.make apps/CMakeFiles/warp2ps.dir/depend +make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/probe.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/reformatx.dir/DependInfo.cmake --color= -make -f apps/CMakeFiles/registration.dir/build.make apps/CMakeFiles/registration.dir/depend +make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +make -f apps/CMakeFiles/xform2dfield.dir/build.make apps/CMakeFiles/xform2dfield.dir/build make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/xform2itk.dir/DependInfo.cmake --color= -[ 90%] Built target warpx -make -f apps/CMakeFiles/warp2ps.dir/build.make apps/CMakeFiles/warp2ps.dir/depend make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/registration.dir/DependInfo.cmake --color= -[ 90%] Built target lmsba -make -f apps/CMakeFiles/fit_spline_dfield.dir/build.make apps/CMakeFiles/fit_spline_dfield.dir/depend -[ 90%] Built target mk_analyze_hdr make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make[4]: Nothing to be done for 'apps/CMakeFiles/similarity.dir/build'. +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/warp2ps.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make -f apps/CMakeFiles/regress.dir/build.make apps/CMakeFiles/regress.dir/depend +make -f apps/CMakeFiles/concat_affine.dir/build.make apps/CMakeFiles/concat_affine.dir/build +make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +make -f apps/CMakeFiles/probe.dir/build.make apps/CMakeFiles/probe.dir/build +make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +make -f apps/CMakeFiles/xform2itk.dir/build.make apps/CMakeFiles/xform2itk.dir/build +make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +make -f apps/CMakeFiles/warp2ps.dir/build.make apps/CMakeFiles/warp2ps.dir/build +make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +make -f apps/CMakeFiles/registration.dir/build.make apps/CMakeFiles/registration.dir/build +make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +make -f apps/CMakeFiles/reformatx.dir/build.make apps/CMakeFiles/reformatx.dir/build make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/warp2ps.dir/DependInfo.cmake --color= +make[4]: Nothing to be done for 'apps/CMakeFiles/xform2dfield.dir/build'. +make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +[ 95%] Built target xform2dfield +make -f apps/CMakeFiles/fit_spline_dfield.dir/build.make apps/CMakeFiles/fit_spline_dfield.dir/depend make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/fit_spline_dfield.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make[4]: Nothing to be done for 'apps/CMakeFiles/mat2dof.dir/build'. +make[4]: Nothing to be done for 'apps/CMakeFiles/xform2itk.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/regress.dir/DependInfo.cmake --color= -make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make[4]: Nothing to be done for 'apps/CMakeFiles/mk_adni_phantom.dir/build'. -make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[ 90%] Built target similarity -make -f apps/CMakeFiles/gregxform.dir/build.make apps/CMakeFiles/gregxform.dir/depend +make[4]: Nothing to be done for 'apps/CMakeFiles/concat_affine.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make -f apps/CMakeFiles/overlap.dir/build.make apps/CMakeFiles/overlap.dir/build +make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +make[4]: Nothing to be done for 'apps/CMakeFiles/warp2ps.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make -f apps/CMakeFiles/mrbias.dir/build.make apps/CMakeFiles/mrbias.dir/build make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/gregxform.dir/DependInfo.cmake --color= -[ 91%] Built target mat2dof +make[4]: Nothing to be done for 'apps/CMakeFiles/probe.dir/build'. +make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +[ 95%] Built target xform2itk +make -f apps/CMakeFiles/regress.dir/build.make apps/CMakeFiles/regress.dir/depend +[ 96%] Built target concat_affine +make -f apps/CMakeFiles/gregxform.dir/build.make apps/CMakeFiles/gregxform.dir/depend +[ 96%] Built target warp2ps make -f apps/CMakeFiles/epiunwarp.dir/build.make apps/CMakeFiles/epiunwarp.dir/depend -[ 92%] Built target mk_adni_phantom +[ 96%] Built target probe make -f apps/CMakeFiles/sbai.dir/build.make apps/CMakeFiles/sbai.dir/depend -make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make -f apps/CMakeFiles/xform2dfield.dir/build.make apps/CMakeFiles/xform2dfield.dir/build +make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/regress.dir/DependInfo.cmake --color= +make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/gregxform.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/epiunwarp.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/sbai.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make -f apps/CMakeFiles/concat_affine.dir/build.make apps/CMakeFiles/concat_affine.dir/build +make -f apps/CMakeFiles/fit_spline_dfield.dir/build.make apps/CMakeFiles/fit_spline_dfield.dir/build make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make[4]: Nothing to be done for 'apps/CMakeFiles/registrationx.dir/build'. -make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +make[4]: Nothing to be done for 'apps/CMakeFiles/registration.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make -f apps/CMakeFiles/probe.dir/build.make apps/CMakeFiles/probe.dir/build -[ 93%] Built target registrationx +[ 96%] Built target registration make -f apps/CMakeFiles/reorient.dir/build.make apps/CMakeFiles/reorient.dir/depend make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make[4]: Nothing to be done for 'apps/CMakeFiles/fib2image.dir/build'. +make[4]: Nothing to be done for 'apps/CMakeFiles/reformatx.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/reorient.dir/DependInfo.cmake --color= -make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make -f apps/CMakeFiles/xform2itk.dir/build.make apps/CMakeFiles/xform2itk.dir/build -[ 93%] Built target fib2image +[ 97%] Built target reformatx make -f apps/CMakeFiles/fit_affine_xform_landmarks.dir/build.make apps/CMakeFiles/fit_affine_xform_landmarks.dir/depend -make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make -f apps/CMakeFiles/registration.dir/build.make apps/CMakeFiles/registration.dir/build make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/fit_affine_xform_landmarks.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make -f apps/CMakeFiles/reformatx.dir/build.make apps/CMakeFiles/reformatx.dir/build -make -f apps/CMakeFiles/warp2ps.dir/build.make apps/CMakeFiles/warp2ps.dir/build -make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make -f apps/CMakeFiles/fit_spline_dfield.dir/build.make apps/CMakeFiles/fit_spline_dfield.dir/build +make -f apps/CMakeFiles/gregxform.dir/build.make apps/CMakeFiles/gregxform.dir/build make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/regress.dir/build.make apps/CMakeFiles/regress.dir/build -make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make[4]: Nothing to be done for 'apps/CMakeFiles/overlap.dir/build'. -make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make -f apps/CMakeFiles/gregxform.dir/build.make apps/CMakeFiles/gregxform.dir/build make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/epiunwarp.dir/build.make apps/CMakeFiles/epiunwarp.dir/build -[ 94%] Built target overlap -make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make[4]: Nothing to be done for 'apps/CMakeFiles/xform2dfield.dir/build'. -make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make -f apps/CMakeFiles/interleaved_bad_slices.dir/build.make apps/CMakeFiles/interleaved_bad_slices.dir/depend -make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make[4]: Nothing to be done for 'apps/CMakeFiles/mrbias.dir/build'. -make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/sbai.dir/build.make apps/CMakeFiles/sbai.dir/build -make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make[4]: Nothing to be done for 'apps/CMakeFiles/concat_affine.dir/build'. -make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/interleaved_bad_slices.dir/DependInfo.cmake --color= -[ 94%] Built target mrbias -make -f apps/CMakeFiles/statistics.dir/build.make apps/CMakeFiles/statistics.dir/depend -[ 95%] Built target xform2dfield -make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make -f apps/CMakeFiles/reorient.dir/build.make apps/CMakeFiles/reorient.dir/build -make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make[4]: Nothing to be done for 'apps/CMakeFiles/probe.dir/build'. -make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/statistics.dir/DependInfo.cmake --color= -[ 96%] Built target concat_affine -make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make[4]: Nothing to be done for 'apps/CMakeFiles/xform2itk.dir/build'. -make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/fit_affine_xform_landmarks.dir/build.make apps/CMakeFiles/fit_affine_xform_landmarks.dir/build -[ 96%] Built target probe -make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make[4]: Nothing to be done for 'apps/CMakeFiles/warp2ps.dir/build'. -make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/fit_spline_dfield.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[ 96%] Built target xform2itk +make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +make -f apps/CMakeFiles/reorient.dir/build.make apps/CMakeFiles/reorient.dir/build +[ 97%] Built target fit_spline_dfield +make -f apps/CMakeFiles/interleaved_bad_slices.dir/build.make apps/CMakeFiles/interleaved_bad_slices.dir/depend make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make[4]: Nothing to be done for 'apps/CMakeFiles/registration.dir/build'. +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/interleaved_bad_slices.dir/DependInfo.cmake --color= +make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +make[4]: Nothing to be done for 'apps/CMakeFiles/gregxform.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/regress.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +[ 97%] Built target gregxform +make -f apps/CMakeFiles/statistics.dir/build.make apps/CMakeFiles/statistics.dir/depend make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make[4]: Nothing to be done for 'apps/CMakeFiles/reformatx.dir/build'. +make[4]: Nothing to be done for 'apps/CMakeFiles/epiunwarp.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make[4]: Nothing to be done for 'apps/CMakeFiles/gregxform.dir/build'. +make[4]: Nothing to be done for 'apps/CMakeFiles/fit_affine_xform_landmarks.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[ 96%] Built target warp2ps +[ 97%] Built target regress make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make[4]: Nothing to be done for 'apps/CMakeFiles/epiunwarp.dir/build'. -make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/statistics.dir/DependInfo.cmake --color= +[ 97%] Built target epiunwarp +[ 98%] Built target fit_affine_xform_landmarks make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/sbai.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make -f apps/CMakeFiles/interleaved_bad_slices.dir/build.make apps/CMakeFiles/interleaved_bad_slices.dir/build -[ 96%] Built target registration -[ 96%] Built target fit_spline_dfield make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/reorient.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -make[4]: Nothing to be done for 'apps/CMakeFiles/fit_affine_xform_landmarks.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +make -f apps/CMakeFiles/interleaved_bad_slices.dir/build.make apps/CMakeFiles/interleaved_bad_slices.dir/build +[ 98%] Built target sbai +[ 98%] Built target reorient make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/statistics.dir/build.make apps/CMakeFiles/statistics.dir/build -[ 96%] Built target regress -[ 97%] Built target reformatx make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/interleaved_bad_slices.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' +[ 99%] Built target interleaved_bad_slices make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/statistics.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' -[ 97%] Built target gregxform -[ 97%] Built target epiunwarp -[ 97%] Built target sbai -[ 97%] Built target reorient -[ 98%] Built target fit_affine_xform_landmarks -[ 99%] Built target interleaved_bad_slices [100%] Built target statistics make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_start /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/CMakeFiles 0 @@ -5221,15 +5287,15 @@ -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/share/cmtk/doc/COPYING.txt -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/share/cmtk/doc/README.txt -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/share/cmtk/doc//Licenses +-- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/share/cmtk/doc//Licenses/LICENSE.mxml +-- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/share/cmtk/doc//Licenses/LICENSE.cmtk +-- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/share/cmtk/doc//Licenses/LICENSE.zlib -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/share/cmtk/doc//Licenses/LICENSE.sqlite3 +-- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/share/cmtk/doc//Licenses/LICENSE.vtk -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/share/cmtk/doc//Licenses/LICENSE.alglib -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/share/cmtk/doc//Licenses/LICENSE.dcmtk -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/share/cmtk/doc//Licenses/LICENSE.numdiff --- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/share/cmtk/doc//Licenses/LICENSE.vtk --- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/share/cmtk/doc//Licenses/LICENSE.zlib --- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/share/cmtk/doc//Licenses/LICENSE.mxml -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/share/cmtk/doc//Licenses/LICENSE.NrrdIO --- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/share/cmtk/doc//Licenses/LICENSE.cmtk -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/UseCMTK.cmake -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/CMTKConfig.cmake -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/cmtkconfig.h @@ -5869,7 +5935,7 @@ ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. -/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/cmtk_functions.sh: 37: .: cannot open /usr/lib/cmtk/bin/cmtk_locking.sh: No such file +/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/cmtk_functions.sh: line 37: /usr/lib/cmtk/bin/cmtk_locking.sh: No such file or directory Manpage for /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/cmtk_functions.sh -- FAILED ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. @@ -5877,13 +5943,13 @@ ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. -/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/correct_dwi_distortion: 34: .: cannot open /usr/lib/cmtk/bin/cmtk_functions.sh: No such file +/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/correct_dwi_distortion: line 34: /usr/lib/cmtk/bin/cmtk_functions.sh: No such file or directory Manpage for /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/correct_dwi_distortion -- FAILED ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. -/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/correct_dwi_distortion_and_motion: 34: .: cannot open /usr/lib/cmtk/bin/cmtk_functions.sh: No such file +/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/correct_dwi_distortion_and_motion: line 34: /usr/lib/cmtk/bin/cmtk_functions.sh: No such file or directory Manpage for /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/correct_dwi_distortion_and_motion -- FAILED ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. -/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/correct_nex_motion: 36: .: cannot open /usr/lib/cmtk/bin/cmtk_functions.sh: No such file +/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/correct_nex_motion: line 36: /usr/lib/cmtk/bin/cmtk_functions.sh: No such file or directory Manpage for /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/correct_nex_motion -- FAILED ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. @@ -5910,7 +5976,7 @@ ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. -/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/groupwise_reformat: 36: .: cannot open /usr/lib/cmtk/bin/cmtk_functions.sh: No such file +/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/groupwise_reformat: line 36: /usr/lib/cmtk/bin/cmtk_functions.sh: No such file or directory Manpage for /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/groupwise_reformat -- FAILED ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. @@ -6073,121 +6139,105 @@ install -p -m0644 debian/manpages/cmtk-xform2itk.1 debian/cmtk/usr/share/man/man1/cmtk-xform2itk.1 install -p -m0644 debian/manpages/cmtk-xform2scalar.1 debian/cmtk/usr/share/man/man1/cmtk-xform2scalar.1 install -p -m0644 debian/manpages/cmtk.1 debian/cmtk/usr/share/man/man1/cmtk.1 - man-recode --to-code UTF-8 --suffix .dh-new debian/cmtk/usr/share/man/man1/cmtk-asegment.1 debian/cmtk/usr/share/man/man1/cmtk-asegment_sri24.1 debian/cmtk/usr/share/man/man1/cmtk-average_affine.1 debian/cmtk/usr/share/man/man1/cmtk-average_images.1 debian/cmtk/usr/share/man/man1/cmtk-average_labels.1 debian/cmtk/usr/share/man/man1/cmtk-avg_adm.1 - man-recode --to-code UTF-8 --suffix .dh-new debian/cmtk/usr/share/man/man1/cmtk-concat_affine.1 debian/cmtk/usr/share/man/man1/cmtk-convert_warp.1 debian/cmtk/usr/share/man/man1/cmtk-convertx.1 debian/cmtk/usr/share/man/man1/cmtk-dbtool.1 debian/cmtk/usr/share/man/man1/cmtk-dcm2image.1 debian/cmtk/usr/share/man/man1/cmtk-describe.1 - man-recode --to-code UTF-8 --suffix .dh-new debian/cmtk/usr/share/man/man1/cmtk-destripe.1 debian/cmtk/usr/share/man/man1/cmtk-detect_adni_phantom.1 debian/cmtk/usr/share/man/man1/cmtk-detect_spheres_matched_filter.1 debian/cmtk/usr/share/man/man1/cmtk-dof2mat.1 debian/cmtk/usr/share/man/man1/cmtk-dwi_mask_bad_slices.1 debian/cmtk/usr/share/man/man1/cmtk-epiunwarp.1 - man-recode --to-code UTF-8 --suffix .dh-new debian/cmtk/usr/share/man/man1/cmtk-fib2image.1 debian/cmtk/usr/share/man/man1/cmtk-fibxform.1 debian/cmtk/usr/share/man/man1/cmtk-film.1 debian/cmtk/usr/share/man/man1/cmtk-filter.1 debian/cmtk/usr/share/man/man1/cmtk-fit_affine_dfield.1 debian/cmtk/usr/share/man/man1/cmtk-fit_affine_xform.1 - man-recode --to-code UTF-8 --suffix .dh-new debian/cmtk/usr/share/man/man1/cmtk-fit_affine_xform_landmarks.1 debian/cmtk/usr/share/man/man1/cmtk-fit_spline_dfield.1 debian/cmtk/usr/share/man/man1/cmtk-fit_spline_xform.1 debian/cmtk/usr/share/man/man1/cmtk-geomatch.1 debian/cmtk/usr/share/man/man1/cmtk-glm.1 debian/cmtk/usr/share/man/man1/cmtk-gmm.1 - man-recode --to-code UTF-8 --suffix .dh-new debian/cmtk/usr/share/man/man1/cmtk-gregxform.1 debian/cmtk/usr/share/man/man1/cmtk-groupwise_affine.1 debian/cmtk/usr/share/man/man1/cmtk-groupwise_init.1 debian/cmtk/usr/share/man/man1/cmtk-groupwise_warp.1 debian/cmtk/usr/share/man/man1/cmtk-hausdorff.1 debian/cmtk/usr/share/man/man1/cmtk-histogram.1 - man-recode --to-code UTF-8 --suffix .dh-new debian/cmtk/usr/share/man/man1/cmtk-imagemath.1 debian/cmtk/usr/share/man/man1/cmtk-interleaved_bad_slices.1 debian/cmtk/usr/share/man/man1/cmtk-iterative_shape_averaging.1 debian/cmtk/usr/share/man/man1/cmtk-jidb.1 debian/cmtk/usr/share/man/man1/cmtk-levelset.1 debian/cmtk/usr/share/man/man1/cmtk-lmsba.1 - man-recode --to-code UTF-8 --suffix .dh-new debian/cmtk/usr/share/man/man1/cmtk-lsba.1 debian/cmtk/usr/share/man/man1/cmtk-lvote.1 debian/cmtk/usr/share/man/man1/cmtk-make_initial_affine.1 debian/cmtk/usr/share/man/man1/cmtk-mat2dof.1 debian/cmtk/usr/share/man/man1/cmtk-mcaffine.1 debian/cmtk/usr/share/man/man1/cmtk-mcwarp.1 - man-recode --to-code UTF-8 --suffix .dh-new debian/cmtk/usr/share/man/man1/cmtk-mk_adni_phantom.1 debian/cmtk/usr/share/man/man1/cmtk-mk_analyze_hdr.1 debian/cmtk/usr/share/man/man1/cmtk-mk_nifti_hdr.1 debian/cmtk/usr/share/man/man1/cmtk-mk_phantom_3d.1 debian/cmtk/usr/share/man/man1/cmtk-mrbias.1 debian/cmtk/usr/share/man/man1/cmtk-overlap.1 - man-recode --to-code UTF-8 --suffix .dh-new debian/cmtk/usr/share/man/man1/cmtk-probe.1 debian/cmtk/usr/share/man/man1/cmtk-pxsearch.1 debian/cmtk/usr/share/man/man1/cmtk-reformatx.1 debian/cmtk/usr/share/man/man1/cmtk-registration.1 debian/cmtk/usr/share/man/man1/cmtk-registrationx.1 debian/cmtk/usr/share/man/man1/cmtk-regress.1 - man-recode --to-code UTF-8 --suffix .dh-new debian/cmtk/usr/share/man/man1/cmtk-reorient.1 debian/cmtk/usr/share/man/man1/cmtk-sba.1 debian/cmtk/usr/share/man/man1/cmtk-sbai.1 debian/cmtk/usr/share/man/man1/cmtk-sequence.1 debian/cmtk/usr/share/man/man1/cmtk-similarity.1 debian/cmtk/usr/share/man/man1/cmtk-split.1 - man-recode --to-code UTF-8 --suffix .dh-new debian/cmtk/usr/share/man/man1/cmtk-statistics.1 debian/cmtk/usr/share/man/man1/cmtk-stream_pixels.1 debian/cmtk/usr/share/man/man1/cmtk-streamxform.1 debian/cmtk/usr/share/man/man1/cmtk-sympl.1 debian/cmtk/usr/share/man/man1/cmtk-symplx.1 debian/cmtk/usr/share/man/man1/cmtk-ttest.1 - man-recode --to-code UTF-8 --suffix .dh-new debian/cmtk/usr/share/man/man1/cmtk-warp.1 debian/cmtk/usr/share/man/man1/cmtk-warp2ps.1 debian/cmtk/usr/share/man/man1/cmtk-warpx.1 debian/cmtk/usr/share/man/man1/cmtk-xform2dfield.1 debian/cmtk/usr/share/man/man1/cmtk-xform2itk.1 debian/cmtk/usr/share/man/man1/cmtk-xform2scalar.1 - man-recode --to-code UTF-8 --suffix .dh-new debian/cmtk/usr/share/man/man1/cmtk-unsplit.1 debian/cmtk/usr/share/man/man1/cmtk-unwarp_image_phantom.1 debian/cmtk/usr/share/man/man1/cmtk-vol2csv.1 debian/cmtk/usr/share/man/man1/cmtk-volume_injection.1 debian/cmtk/usr/share/man/man1/cmtk-volume_reconstruction.1 debian/cmtk/usr/share/man/man1/cmtk-vtkxform.1 - man-recode --to-code UTF-8 --suffix .dh-new debian/cmtk/usr/share/man/man1/cmtk.1 + man-recode --to-code UTF-8 --suffix .dh-new debian/cmtk/usr/share/man/man1/cmtk-asegment.1 debian/cmtk/usr/share/man/man1/cmtk-asegment_sri24.1 debian/cmtk/usr/share/man/man1/cmtk-average_affine.1 debian/cmtk/usr/share/man/man1/cmtk-average_images.1 debian/cmtk/usr/share/man/man1/cmtk-average_labels.1 debian/cmtk/usr/share/man/man1/cmtk-avg_adm.1 debian/cmtk/usr/share/man/man1/cmtk-concat_affine.1 debian/cmtk/usr/share/man/man1/cmtk-convert_warp.1 debian/cmtk/usr/share/man/man1/cmtk-convertx.1 debian/cmtk/usr/share/man/man1/cmtk-dbtool.1 debian/cmtk/usr/share/man/man1/cmtk-dcm2image.1 debian/cmtk/usr/share/man/man1/cmtk-describe.1 debian/cmtk/usr/share/man/man1/cmtk-destripe.1 + man-recode --to-code UTF-8 --suffix .dh-new debian/cmtk/usr/share/man/man1/cmtk-fit_spline_xform.1 debian/cmtk/usr/share/man/man1/cmtk-geomatch.1 debian/cmtk/usr/share/man/man1/cmtk-glm.1 debian/cmtk/usr/share/man/man1/cmtk-gmm.1 debian/cmtk/usr/share/man/man1/cmtk-gregxform.1 debian/cmtk/usr/share/man/man1/cmtk-groupwise_affine.1 debian/cmtk/usr/share/man/man1/cmtk-groupwise_init.1 debian/cmtk/usr/share/man/man1/cmtk-groupwise_warp.1 debian/cmtk/usr/share/man/man1/cmtk-hausdorff.1 debian/cmtk/usr/share/man/man1/cmtk-histogram.1 debian/cmtk/usr/share/man/man1/cmtk-imagemath.1 debian/cmtk/usr/share/man/man1/cmtk-interleaved_bad_slices.1 debian/cmtk/usr/share/man/man1/cmtk-iterative_shape_averaging.1 + man-recode --to-code UTF-8 --suffix .dh-new debian/cmtk/usr/share/man/man1/cmtk-mrbias.1 debian/cmtk/usr/share/man/man1/cmtk-overlap.1 debian/cmtk/usr/share/man/man1/cmtk-probe.1 debian/cmtk/usr/share/man/man1/cmtk-pxsearch.1 debian/cmtk/usr/share/man/man1/cmtk-reformatx.1 debian/cmtk/usr/share/man/man1/cmtk-registration.1 debian/cmtk/usr/share/man/man1/cmtk-registrationx.1 debian/cmtk/usr/share/man/man1/cmtk-regress.1 debian/cmtk/usr/share/man/man1/cmtk-reorient.1 debian/cmtk/usr/share/man/man1/cmtk-sba.1 debian/cmtk/usr/share/man/man1/cmtk-sbai.1 debian/cmtk/usr/share/man/man1/cmtk-sequence.1 debian/cmtk/usr/share/man/man1/cmtk-similarity.1 + man-recode --to-code UTF-8 --suffix .dh-new debian/cmtk/usr/share/man/man1/cmtk-detect_adni_phantom.1 debian/cmtk/usr/share/man/man1/cmtk-detect_spheres_matched_filter.1 debian/cmtk/usr/share/man/man1/cmtk-dof2mat.1 debian/cmtk/usr/share/man/man1/cmtk-dwi_mask_bad_slices.1 debian/cmtk/usr/share/man/man1/cmtk-epiunwarp.1 debian/cmtk/usr/share/man/man1/cmtk-fib2image.1 debian/cmtk/usr/share/man/man1/cmtk-fibxform.1 debian/cmtk/usr/share/man/man1/cmtk-film.1 debian/cmtk/usr/share/man/man1/cmtk-filter.1 debian/cmtk/usr/share/man/man1/cmtk-fit_affine_dfield.1 debian/cmtk/usr/share/man/man1/cmtk-fit_affine_xform.1 debian/cmtk/usr/share/man/man1/cmtk-fit_affine_xform_landmarks.1 debian/cmtk/usr/share/man/man1/cmtk-fit_spline_dfield.1 + man-recode --to-code UTF-8 --suffix .dh-new debian/cmtk/usr/share/man/man1/cmtk-jidb.1 debian/cmtk/usr/share/man/man1/cmtk-levelset.1 debian/cmtk/usr/share/man/man1/cmtk-lmsba.1 debian/cmtk/usr/share/man/man1/cmtk-lsba.1 debian/cmtk/usr/share/man/man1/cmtk-lvote.1 debian/cmtk/usr/share/man/man1/cmtk-make_initial_affine.1 debian/cmtk/usr/share/man/man1/cmtk-mat2dof.1 debian/cmtk/usr/share/man/man1/cmtk-mcaffine.1 debian/cmtk/usr/share/man/man1/cmtk-mcwarp.1 debian/cmtk/usr/share/man/man1/cmtk-mk_adni_phantom.1 debian/cmtk/usr/share/man/man1/cmtk-mk_analyze_hdr.1 debian/cmtk/usr/share/man/man1/cmtk-mk_nifti_hdr.1 debian/cmtk/usr/share/man/man1/cmtk-mk_phantom_3d.1 + man-recode --to-code UTF-8 --suffix .dh-new debian/cmtk/usr/share/man/man1/cmtk-warp.1 debian/cmtk/usr/share/man/man1/cmtk-warp2ps.1 debian/cmtk/usr/share/man/man1/cmtk-warpx.1 debian/cmtk/usr/share/man/man1/cmtk-xform2dfield.1 debian/cmtk/usr/share/man/man1/cmtk-xform2itk.1 debian/cmtk/usr/share/man/man1/cmtk-xform2scalar.1 debian/cmtk/usr/share/man/man1/cmtk.1 + man-recode --to-code UTF-8 --suffix .dh-new debian/cmtk/usr/share/man/man1/cmtk-split.1 debian/cmtk/usr/share/man/man1/cmtk-statistics.1 debian/cmtk/usr/share/man/man1/cmtk-stream_pixels.1 debian/cmtk/usr/share/man/man1/cmtk-streamxform.1 debian/cmtk/usr/share/man/man1/cmtk-sympl.1 debian/cmtk/usr/share/man/man1/cmtk-symplx.1 debian/cmtk/usr/share/man/man1/cmtk-ttest.1 debian/cmtk/usr/share/man/man1/cmtk-unsplit.1 debian/cmtk/usr/share/man/man1/cmtk-unwarp_image_phantom.1 debian/cmtk/usr/share/man/man1/cmtk-vol2csv.1 debian/cmtk/usr/share/man/man1/cmtk-volume_injection.1 debian/cmtk/usr/share/man/man1/cmtk-volume_reconstruction.1 debian/cmtk/usr/share/man/man1/cmtk-vtkxform.1 + mv debian/cmtk/usr/share/man/man1/cmtk-warp.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-warp.1 + mv debian/cmtk/usr/share/man/man1/cmtk-warp2ps.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-warp2ps.1 + mv debian/cmtk/usr/share/man/man1/cmtk-warpx.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-warpx.1 + mv debian/cmtk/usr/share/man/man1/cmtk-xform2dfield.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-xform2dfield.1 + mv debian/cmtk/usr/share/man/man1/cmtk-xform2itk.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-xform2itk.1 + mv debian/cmtk/usr/share/man/man1/cmtk-xform2scalar.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-xform2scalar.1 mv debian/cmtk/usr/share/man/man1/cmtk.1.dh-new debian/cmtk/usr/share/man/man1/cmtk.1 - chmod 0644 -- debian/cmtk/usr/share/man/man1/cmtk.1 - mv debian/cmtk/usr/share/man/man1/cmtk-fit_affine_xform_landmarks.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-fit_affine_xform_landmarks.1 - mv debian/cmtk/usr/share/man/man1/cmtk-fit_spline_dfield.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-fit_spline_dfield.1 + chmod 0644 -- debian/cmtk/usr/share/man/man1/cmtk-warp.1 debian/cmtk/usr/share/man/man1/cmtk-warp2ps.1 debian/cmtk/usr/share/man/man1/cmtk-warpx.1 debian/cmtk/usr/share/man/man1/cmtk-xform2dfield.1 debian/cmtk/usr/share/man/man1/cmtk-xform2itk.1 debian/cmtk/usr/share/man/man1/cmtk-xform2scalar.1 debian/cmtk/usr/share/man/man1/cmtk.1 + mv debian/cmtk/usr/share/man/man1/cmtk-mrbias.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-mrbias.1 + mv debian/cmtk/usr/share/man/man1/cmtk-overlap.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-overlap.1 + mv debian/cmtk/usr/share/man/man1/cmtk-probe.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-probe.1 + mv debian/cmtk/usr/share/man/man1/cmtk-pxsearch.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-pxsearch.1 + mv debian/cmtk/usr/share/man/man1/cmtk-reformatx.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-reformatx.1 + mv debian/cmtk/usr/share/man/man1/cmtk-registration.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-registration.1 + mv debian/cmtk/usr/share/man/man1/cmtk-registrationx.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-registrationx.1 + mv debian/cmtk/usr/share/man/man1/cmtk-regress.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-regress.1 + mv debian/cmtk/usr/share/man/man1/cmtk-reorient.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-reorient.1 + mv debian/cmtk/usr/share/man/man1/cmtk-sba.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-sba.1 + mv debian/cmtk/usr/share/man/man1/cmtk-sbai.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-sbai.1 + mv debian/cmtk/usr/share/man/man1/cmtk-sequence.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-sequence.1 + mv debian/cmtk/usr/share/man/man1/cmtk-similarity.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-similarity.1 + chmod 0644 -- debian/cmtk/usr/share/man/man1/cmtk-mrbias.1 debian/cmtk/usr/share/man/man1/cmtk-overlap.1 debian/cmtk/usr/share/man/man1/cmtk-probe.1 debian/cmtk/usr/share/man/man1/cmtk-pxsearch.1 debian/cmtk/usr/share/man/man1/cmtk-reformatx.1 debian/cmtk/usr/share/man/man1/cmtk-registration.1 debian/cmtk/usr/share/man/man1/cmtk-registrationx.1 debian/cmtk/usr/share/man/man1/cmtk-regress.1 debian/cmtk/usr/share/man/man1/cmtk-reorient.1 debian/cmtk/usr/share/man/man1/cmtk-sba.1 debian/cmtk/usr/share/man/man1/cmtk-sbai.1 debian/cmtk/usr/share/man/man1/cmtk-sequence.1 debian/cmtk/usr/share/man/man1/cmtk-similarity.1 mv debian/cmtk/usr/share/man/man1/cmtk-fit_spline_xform.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-fit_spline_xform.1 mv debian/cmtk/usr/share/man/man1/cmtk-geomatch.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-geomatch.1 mv debian/cmtk/usr/share/man/man1/cmtk-glm.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-glm.1 mv debian/cmtk/usr/share/man/man1/cmtk-gmm.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-gmm.1 - chmod 0644 -- debian/cmtk/usr/share/man/man1/cmtk-fit_affine_xform_landmarks.1 debian/cmtk/usr/share/man/man1/cmtk-fit_spline_dfield.1 debian/cmtk/usr/share/man/man1/cmtk-fit_spline_xform.1 debian/cmtk/usr/share/man/man1/cmtk-geomatch.1 debian/cmtk/usr/share/man/man1/cmtk-glm.1 debian/cmtk/usr/share/man/man1/cmtk-gmm.1 + mv debian/cmtk/usr/share/man/man1/cmtk-gregxform.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-gregxform.1 + mv debian/cmtk/usr/share/man/man1/cmtk-groupwise_affine.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-groupwise_affine.1 + mv debian/cmtk/usr/share/man/man1/cmtk-groupwise_init.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-groupwise_init.1 + mv debian/cmtk/usr/share/man/man1/cmtk-groupwise_warp.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-groupwise_warp.1 + mv debian/cmtk/usr/share/man/man1/cmtk-hausdorff.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-hausdorff.1 + mv debian/cmtk/usr/share/man/man1/cmtk-histogram.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-histogram.1 + mv debian/cmtk/usr/share/man/man1/cmtk-imagemath.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-imagemath.1 + mv debian/cmtk/usr/share/man/man1/cmtk-interleaved_bad_slices.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-interleaved_bad_slices.1 + mv debian/cmtk/usr/share/man/man1/cmtk-iterative_shape_averaging.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-iterative_shape_averaging.1 + chmod 0644 -- debian/cmtk/usr/share/man/man1/cmtk-fit_spline_xform.1 debian/cmtk/usr/share/man/man1/cmtk-geomatch.1 debian/cmtk/usr/share/man/man1/cmtk-glm.1 debian/cmtk/usr/share/man/man1/cmtk-gmm.1 debian/cmtk/usr/share/man/man1/cmtk-gregxform.1 debian/cmtk/usr/share/man/man1/cmtk-groupwise_affine.1 debian/cmtk/usr/share/man/man1/cmtk-groupwise_init.1 debian/cmtk/usr/share/man/man1/cmtk-groupwise_warp.1 debian/cmtk/usr/share/man/man1/cmtk-hausdorff.1 debian/cmtk/usr/share/man/man1/cmtk-histogram.1 debian/cmtk/usr/share/man/man1/cmtk-imagemath.1 debian/cmtk/usr/share/man/man1/cmtk-interleaved_bad_slices.1 debian/cmtk/usr/share/man/man1/cmtk-iterative_shape_averaging.1 mv debian/cmtk/usr/share/man/man1/cmtk-asegment.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-asegment.1 mv debian/cmtk/usr/share/man/man1/cmtk-asegment_sri24.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-asegment_sri24.1 mv debian/cmtk/usr/share/man/man1/cmtk-average_affine.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-average_affine.1 mv debian/cmtk/usr/share/man/man1/cmtk-average_images.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-average_images.1 mv debian/cmtk/usr/share/man/man1/cmtk-average_labels.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-average_labels.1 mv debian/cmtk/usr/share/man/man1/cmtk-avg_adm.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-avg_adm.1 - chmod 0644 -- debian/cmtk/usr/share/man/man1/cmtk-asegment.1 debian/cmtk/usr/share/man/man1/cmtk-asegment_sri24.1 debian/cmtk/usr/share/man/man1/cmtk-average_affine.1 debian/cmtk/usr/share/man/man1/cmtk-average_images.1 debian/cmtk/usr/share/man/man1/cmtk-average_labels.1 debian/cmtk/usr/share/man/man1/cmtk-avg_adm.1 mv debian/cmtk/usr/share/man/man1/cmtk-concat_affine.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-concat_affine.1 mv debian/cmtk/usr/share/man/man1/cmtk-convert_warp.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-convert_warp.1 mv debian/cmtk/usr/share/man/man1/cmtk-convertx.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-convertx.1 mv debian/cmtk/usr/share/man/man1/cmtk-dbtool.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-dbtool.1 mv debian/cmtk/usr/share/man/man1/cmtk-dcm2image.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-dcm2image.1 mv debian/cmtk/usr/share/man/man1/cmtk-describe.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-describe.1 - chmod 0644 -- debian/cmtk/usr/share/man/man1/cmtk-concat_affine.1 debian/cmtk/usr/share/man/man1/cmtk-convert_warp.1 debian/cmtk/usr/share/man/man1/cmtk-convertx.1 debian/cmtk/usr/share/man/man1/cmtk-dbtool.1 debian/cmtk/usr/share/man/man1/cmtk-dcm2image.1 debian/cmtk/usr/share/man/man1/cmtk-describe.1 - mv debian/cmtk/usr/share/man/man1/cmtk-fib2image.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-fib2image.1 - mv debian/cmtk/usr/share/man/man1/cmtk-fibxform.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-fibxform.1 - mv debian/cmtk/usr/share/man/man1/cmtk-film.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-film.1 - mv debian/cmtk/usr/share/man/man1/cmtk-filter.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-filter.1 - mv debian/cmtk/usr/share/man/man1/cmtk-fit_affine_dfield.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-fit_affine_dfield.1 - mv debian/cmtk/usr/share/man/man1/cmtk-fit_affine_xform.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-fit_affine_xform.1 - chmod 0644 -- debian/cmtk/usr/share/man/man1/cmtk-fib2image.1 debian/cmtk/usr/share/man/man1/cmtk-fibxform.1 debian/cmtk/usr/share/man/man1/cmtk-film.1 debian/cmtk/usr/share/man/man1/cmtk-filter.1 debian/cmtk/usr/share/man/man1/cmtk-fit_affine_dfield.1 debian/cmtk/usr/share/man/man1/cmtk-fit_affine_xform.1 mv debian/cmtk/usr/share/man/man1/cmtk-destripe.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-destripe.1 - mv debian/cmtk/usr/share/man/man1/cmtk-detect_adni_phantom.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-detect_adni_phantom.1 - mv debian/cmtk/usr/share/man/man1/cmtk-detect_spheres_matched_filter.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-detect_spheres_matched_filter.1 - mv debian/cmtk/usr/share/man/man1/cmtk-dof2mat.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-dof2mat.1 - mv debian/cmtk/usr/share/man/man1/cmtk-dwi_mask_bad_slices.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-dwi_mask_bad_slices.1 - mv debian/cmtk/usr/share/man/man1/cmtk-epiunwarp.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-epiunwarp.1 - chmod 0644 -- debian/cmtk/usr/share/man/man1/cmtk-destripe.1 debian/cmtk/usr/share/man/man1/cmtk-detect_adni_phantom.1 debian/cmtk/usr/share/man/man1/cmtk-detect_spheres_matched_filter.1 debian/cmtk/usr/share/man/man1/cmtk-dof2mat.1 debian/cmtk/usr/share/man/man1/cmtk-dwi_mask_bad_slices.1 debian/cmtk/usr/share/man/man1/cmtk-epiunwarp.1 - mv debian/cmtk/usr/share/man/man1/cmtk-gregxform.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-gregxform.1 - mv debian/cmtk/usr/share/man/man1/cmtk-groupwise_affine.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-groupwise_affine.1 - mv debian/cmtk/usr/share/man/man1/cmtk-groupwise_init.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-groupwise_init.1 - mv debian/cmtk/usr/share/man/man1/cmtk-groupwise_warp.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-groupwise_warp.1 - mv debian/cmtk/usr/share/man/man1/cmtk-hausdorff.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-hausdorff.1 - mv debian/cmtk/usr/share/man/man1/cmtk-histogram.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-histogram.1 - chmod 0644 -- debian/cmtk/usr/share/man/man1/cmtk-gregxform.1 debian/cmtk/usr/share/man/man1/cmtk-groupwise_affine.1 debian/cmtk/usr/share/man/man1/cmtk-groupwise_init.1 debian/cmtk/usr/share/man/man1/cmtk-groupwise_warp.1 debian/cmtk/usr/share/man/man1/cmtk-hausdorff.1 debian/cmtk/usr/share/man/man1/cmtk-histogram.1 - mv debian/cmtk/usr/share/man/man1/cmtk-statistics.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-statistics.1 - mv debian/cmtk/usr/share/man/man1/cmtk-stream_pixels.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-stream_pixels.1 - mv debian/cmtk/usr/share/man/man1/cmtk-streamxform.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-streamxform.1 - mv debian/cmtk/usr/share/man/man1/cmtk-sympl.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-sympl.1 - mv debian/cmtk/usr/share/man/man1/cmtk-symplx.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-symplx.1 - mv debian/cmtk/usr/share/man/man1/cmtk-ttest.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-ttest.1 - chmod 0644 -- debian/cmtk/usr/share/man/man1/cmtk-statistics.1 debian/cmtk/usr/share/man/man1/cmtk-stream_pixels.1 debian/cmtk/usr/share/man/man1/cmtk-streamxform.1 debian/cmtk/usr/share/man/man1/cmtk-sympl.1 debian/cmtk/usr/share/man/man1/cmtk-symplx.1 debian/cmtk/usr/share/man/man1/cmtk-ttest.1 - mv debian/cmtk/usr/share/man/man1/cmtk-mk_adni_phantom.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-mk_adni_phantom.1 - mv debian/cmtk/usr/share/man/man1/cmtk-mk_analyze_hdr.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-mk_analyze_hdr.1 - mv debian/cmtk/usr/share/man/man1/cmtk-mk_nifti_hdr.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-mk_nifti_hdr.1 - mv debian/cmtk/usr/share/man/man1/cmtk-mk_phantom_3d.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-mk_phantom_3d.1 - mv debian/cmtk/usr/share/man/man1/cmtk-mrbias.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-mrbias.1 - mv debian/cmtk/usr/share/man/man1/cmtk-overlap.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-overlap.1 - chmod 0644 -- debian/cmtk/usr/share/man/man1/cmtk-mk_adni_phantom.1 debian/cmtk/usr/share/man/man1/cmtk-mk_analyze_hdr.1 debian/cmtk/usr/share/man/man1/cmtk-mk_nifti_hdr.1 debian/cmtk/usr/share/man/man1/cmtk-mk_phantom_3d.1 debian/cmtk/usr/share/man/man1/cmtk-mrbias.1 debian/cmtk/usr/share/man/man1/cmtk-overlap.1 - mv debian/cmtk/usr/share/man/man1/cmtk-imagemath.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-imagemath.1 - mv debian/cmtk/usr/share/man/man1/cmtk-interleaved_bad_slices.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-interleaved_bad_slices.1 - mv debian/cmtk/usr/share/man/man1/cmtk-iterative_shape_averaging.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-iterative_shape_averaging.1 + chmod 0644 -- debian/cmtk/usr/share/man/man1/cmtk-asegment.1 debian/cmtk/usr/share/man/man1/cmtk-asegment_sri24.1 debian/cmtk/usr/share/man/man1/cmtk-average_affine.1 debian/cmtk/usr/share/man/man1/cmtk-average_images.1 debian/cmtk/usr/share/man/man1/cmtk-average_labels.1 debian/cmtk/usr/share/man/man1/cmtk-avg_adm.1 debian/cmtk/usr/share/man/man1/cmtk-concat_affine.1 debian/cmtk/usr/share/man/man1/cmtk-convert_warp.1 debian/cmtk/usr/share/man/man1/cmtk-convertx.1 debian/cmtk/usr/share/man/man1/cmtk-dbtool.1 debian/cmtk/usr/share/man/man1/cmtk-dcm2image.1 debian/cmtk/usr/share/man/man1/cmtk-describe.1 debian/cmtk/usr/share/man/man1/cmtk-destripe.1 mv debian/cmtk/usr/share/man/man1/cmtk-jidb.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-jidb.1 mv debian/cmtk/usr/share/man/man1/cmtk-levelset.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-levelset.1 mv debian/cmtk/usr/share/man/man1/cmtk-lmsba.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-lmsba.1 - chmod 0644 -- debian/cmtk/usr/share/man/man1/cmtk-imagemath.1 debian/cmtk/usr/share/man/man1/cmtk-interleaved_bad_slices.1 debian/cmtk/usr/share/man/man1/cmtk-iterative_shape_averaging.1 debian/cmtk/usr/share/man/man1/cmtk-jidb.1 debian/cmtk/usr/share/man/man1/cmtk-levelset.1 debian/cmtk/usr/share/man/man1/cmtk-lmsba.1 - mv debian/cmtk/usr/share/man/man1/cmtk-warp.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-warp.1 - mv debian/cmtk/usr/share/man/man1/cmtk-warp2ps.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-warp2ps.1 - mv debian/cmtk/usr/share/man/man1/cmtk-warpx.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-warpx.1 - mv debian/cmtk/usr/share/man/man1/cmtk-xform2dfield.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-xform2dfield.1 - mv debian/cmtk/usr/share/man/man1/cmtk-xform2itk.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-xform2itk.1 - mv debian/cmtk/usr/share/man/man1/cmtk-xform2scalar.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-xform2scalar.1 - chmod 0644 -- debian/cmtk/usr/share/man/man1/cmtk-warp.1 debian/cmtk/usr/share/man/man1/cmtk-warp2ps.1 debian/cmtk/usr/share/man/man1/cmtk-warpx.1 debian/cmtk/usr/share/man/man1/cmtk-xform2dfield.1 debian/cmtk/usr/share/man/man1/cmtk-xform2itk.1 debian/cmtk/usr/share/man/man1/cmtk-xform2scalar.1 - mv debian/cmtk/usr/share/man/man1/cmtk-probe.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-probe.1 - mv debian/cmtk/usr/share/man/man1/cmtk-pxsearch.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-pxsearch.1 - mv debian/cmtk/usr/share/man/man1/cmtk-reformatx.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-reformatx.1 - mv debian/cmtk/usr/share/man/man1/cmtk-registration.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-registration.1 - mv debian/cmtk/usr/share/man/man1/cmtk-registrationx.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-registrationx.1 - mv debian/cmtk/usr/share/man/man1/cmtk-regress.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-regress.1 - chmod 0644 -- debian/cmtk/usr/share/man/man1/cmtk-probe.1 debian/cmtk/usr/share/man/man1/cmtk-pxsearch.1 debian/cmtk/usr/share/man/man1/cmtk-reformatx.1 debian/cmtk/usr/share/man/man1/cmtk-registration.1 debian/cmtk/usr/share/man/man1/cmtk-registrationx.1 debian/cmtk/usr/share/man/man1/cmtk-regress.1 - mv debian/cmtk/usr/share/man/man1/cmtk-reorient.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-reorient.1 - mv debian/cmtk/usr/share/man/man1/cmtk-sba.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-sba.1 - mv debian/cmtk/usr/share/man/man1/cmtk-sbai.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-sbai.1 - mv debian/cmtk/usr/share/man/man1/cmtk-sequence.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-sequence.1 - mv debian/cmtk/usr/share/man/man1/cmtk-similarity.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-similarity.1 - mv debian/cmtk/usr/share/man/man1/cmtk-split.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-split.1 - chmod 0644 -- debian/cmtk/usr/share/man/man1/cmtk-reorient.1 debian/cmtk/usr/share/man/man1/cmtk-sba.1 debian/cmtk/usr/share/man/man1/cmtk-sbai.1 debian/cmtk/usr/share/man/man1/cmtk-sequence.1 debian/cmtk/usr/share/man/man1/cmtk-similarity.1 debian/cmtk/usr/share/man/man1/cmtk-split.1 mv debian/cmtk/usr/share/man/man1/cmtk-lsba.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-lsba.1 mv debian/cmtk/usr/share/man/man1/cmtk-lvote.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-lvote.1 mv debian/cmtk/usr/share/man/man1/cmtk-make_initial_affine.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-make_initial_affine.1 mv debian/cmtk/usr/share/man/man1/cmtk-mat2dof.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-mat2dof.1 mv debian/cmtk/usr/share/man/man1/cmtk-mcaffine.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-mcaffine.1 mv debian/cmtk/usr/share/man/man1/cmtk-mcwarp.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-mcwarp.1 - chmod 0644 -- debian/cmtk/usr/share/man/man1/cmtk-lsba.1 debian/cmtk/usr/share/man/man1/cmtk-lvote.1 debian/cmtk/usr/share/man/man1/cmtk-make_initial_affine.1 debian/cmtk/usr/share/man/man1/cmtk-mat2dof.1 debian/cmtk/usr/share/man/man1/cmtk-mcaffine.1 debian/cmtk/usr/share/man/man1/cmtk-mcwarp.1 + mv debian/cmtk/usr/share/man/man1/cmtk-mk_adni_phantom.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-mk_adni_phantom.1 + mv debian/cmtk/usr/share/man/man1/cmtk-mk_analyze_hdr.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-mk_analyze_hdr.1 + mv debian/cmtk/usr/share/man/man1/cmtk-mk_nifti_hdr.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-mk_nifti_hdr.1 + mv debian/cmtk/usr/share/man/man1/cmtk-mk_phantom_3d.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-mk_phantom_3d.1 + chmod 0644 -- debian/cmtk/usr/share/man/man1/cmtk-jidb.1 debian/cmtk/usr/share/man/man1/cmtk-levelset.1 debian/cmtk/usr/share/man/man1/cmtk-lmsba.1 debian/cmtk/usr/share/man/man1/cmtk-lsba.1 debian/cmtk/usr/share/man/man1/cmtk-lvote.1 debian/cmtk/usr/share/man/man1/cmtk-make_initial_affine.1 debian/cmtk/usr/share/man/man1/cmtk-mat2dof.1 debian/cmtk/usr/share/man/man1/cmtk-mcaffine.1 debian/cmtk/usr/share/man/man1/cmtk-mcwarp.1 debian/cmtk/usr/share/man/man1/cmtk-mk_adni_phantom.1 debian/cmtk/usr/share/man/man1/cmtk-mk_analyze_hdr.1 debian/cmtk/usr/share/man/man1/cmtk-mk_nifti_hdr.1 debian/cmtk/usr/share/man/man1/cmtk-mk_phantom_3d.1 + mv debian/cmtk/usr/share/man/man1/cmtk-split.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-split.1 + mv debian/cmtk/usr/share/man/man1/cmtk-statistics.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-statistics.1 + mv debian/cmtk/usr/share/man/man1/cmtk-stream_pixels.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-stream_pixels.1 + mv debian/cmtk/usr/share/man/man1/cmtk-streamxform.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-streamxform.1 + mv debian/cmtk/usr/share/man/man1/cmtk-sympl.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-sympl.1 + mv debian/cmtk/usr/share/man/man1/cmtk-symplx.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-symplx.1 + mv debian/cmtk/usr/share/man/man1/cmtk-ttest.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-ttest.1 mv debian/cmtk/usr/share/man/man1/cmtk-unsplit.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-unsplit.1 mv debian/cmtk/usr/share/man/man1/cmtk-unwarp_image_phantom.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-unwarp_image_phantom.1 mv debian/cmtk/usr/share/man/man1/cmtk-vol2csv.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-vol2csv.1 mv debian/cmtk/usr/share/man/man1/cmtk-volume_injection.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-volume_injection.1 mv debian/cmtk/usr/share/man/man1/cmtk-volume_reconstruction.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-volume_reconstruction.1 mv debian/cmtk/usr/share/man/man1/cmtk-vtkxform.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-vtkxform.1 - chmod 0644 -- debian/cmtk/usr/share/man/man1/cmtk-unsplit.1 debian/cmtk/usr/share/man/man1/cmtk-unwarp_image_phantom.1 debian/cmtk/usr/share/man/man1/cmtk-vol2csv.1 debian/cmtk/usr/share/man/man1/cmtk-volume_injection.1 debian/cmtk/usr/share/man/man1/cmtk-volume_reconstruction.1 debian/cmtk/usr/share/man/man1/cmtk-vtkxform.1 + chmod 0644 -- debian/cmtk/usr/share/man/man1/cmtk-split.1 debian/cmtk/usr/share/man/man1/cmtk-statistics.1 debian/cmtk/usr/share/man/man1/cmtk-stream_pixels.1 debian/cmtk/usr/share/man/man1/cmtk-streamxform.1 debian/cmtk/usr/share/man/man1/cmtk-sympl.1 debian/cmtk/usr/share/man/man1/cmtk-symplx.1 debian/cmtk/usr/share/man/man1/cmtk-ttest.1 debian/cmtk/usr/share/man/man1/cmtk-unsplit.1 debian/cmtk/usr/share/man/man1/cmtk-unwarp_image_phantom.1 debian/cmtk/usr/share/man/man1/cmtk-vol2csv.1 debian/cmtk/usr/share/man/man1/cmtk-volume_injection.1 debian/cmtk/usr/share/man/man1/cmtk-volume_reconstruction.1 debian/cmtk/usr/share/man/man1/cmtk-vtkxform.1 + mv debian/cmtk/usr/share/man/man1/cmtk-detect_adni_phantom.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-detect_adni_phantom.1 + mv debian/cmtk/usr/share/man/man1/cmtk-detect_spheres_matched_filter.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-detect_spheres_matched_filter.1 + mv debian/cmtk/usr/share/man/man1/cmtk-dof2mat.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-dof2mat.1 + mv debian/cmtk/usr/share/man/man1/cmtk-dwi_mask_bad_slices.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-dwi_mask_bad_slices.1 + mv debian/cmtk/usr/share/man/man1/cmtk-epiunwarp.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-epiunwarp.1 + mv debian/cmtk/usr/share/man/man1/cmtk-fib2image.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-fib2image.1 + mv debian/cmtk/usr/share/man/man1/cmtk-fibxform.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-fibxform.1 + mv debian/cmtk/usr/share/man/man1/cmtk-film.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-film.1 + mv debian/cmtk/usr/share/man/man1/cmtk-filter.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-filter.1 + mv debian/cmtk/usr/share/man/man1/cmtk-fit_affine_dfield.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-fit_affine_dfield.1 + mv debian/cmtk/usr/share/man/man1/cmtk-fit_affine_xform.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-fit_affine_xform.1 + mv debian/cmtk/usr/share/man/man1/cmtk-fit_affine_xform_landmarks.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-fit_affine_xform_landmarks.1 + mv debian/cmtk/usr/share/man/man1/cmtk-fit_spline_dfield.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-fit_spline_dfield.1 + chmod 0644 -- debian/cmtk/usr/share/man/man1/cmtk-detect_adni_phantom.1 debian/cmtk/usr/share/man/man1/cmtk-detect_spheres_matched_filter.1 debian/cmtk/usr/share/man/man1/cmtk-dof2mat.1 debian/cmtk/usr/share/man/man1/cmtk-dwi_mask_bad_slices.1 debian/cmtk/usr/share/man/man1/cmtk-epiunwarp.1 debian/cmtk/usr/share/man/man1/cmtk-fib2image.1 debian/cmtk/usr/share/man/man1/cmtk-fibxform.1 debian/cmtk/usr/share/man/man1/cmtk-film.1 debian/cmtk/usr/share/man/man1/cmtk-filter.1 debian/cmtk/usr/share/man/man1/cmtk-fit_affine_dfield.1 debian/cmtk/usr/share/man/man1/cmtk-fit_affine_xform.1 debian/cmtk/usr/share/man/man1/cmtk-fit_affine_xform_landmarks.1 debian/cmtk/usr/share/man/man1/cmtk-fit_spline_dfield.1 make[1]: Leaving directory '/build/cmtk-3.3.1p1+dfsg' dh_perl dh_link @@ -6213,48 +6263,36 @@ dwz: debian/cmtk/usr/lib/cmtk/libNrrdIO.so: DWARF compression not beneficial - old size 144979 new size 147645 objcopy --compress-debug-sections debian/cmtk/usr/lib/debug/.dwz/i386-linux-gnu/cmtk.debug dh_strip - install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/2b - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/libNrrdIO.so debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/2b/353d0cc667b9db6ea9ee4ed732ee978ee220f6.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/2b/353d0cc667b9db6ea9ee4ed732ee978ee220f6.debug - chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/2b/353d0cc667b9db6ea9ee4ed732ee978ee220f6.debug - strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/cmtk/usr/lib/cmtk/libNrrdIO.so - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/2b/353d0cc667b9db6ea9ee4ed732ee978ee220f6.debug debian/cmtk/usr/lib/cmtk/libNrrdIO.so - install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/85 - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/libcmtkBase.so debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/85/a0590485bd15494a0c56bc6f920101c83e43a2.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/85/a0590485bd15494a0c56bc6f920101c83e43a2.debug - chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/85/a0590485bd15494a0c56bc6f920101c83e43a2.debug - strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/cmtk/usr/lib/cmtk/libcmtkBase.so - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/85/a0590485bd15494a0c56bc6f920101c83e43a2.debug debian/cmtk/usr/lib/cmtk/libcmtkBase.so - install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/13 - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/libcmtkMxml.so debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/13/95edfe4bebac7854d0c9e04a283948e302f95c.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/13/95edfe4bebac7854d0c9e04a283948e302f95c.debug - chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/13/95edfe4bebac7854d0c9e04a283948e302f95c.debug - strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/cmtk/usr/lib/cmtk/libcmtkMxml.so - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/13/95edfe4bebac7854d0c9e04a283948e302f95c.debug debian/cmtk/usr/lib/cmtk/libcmtkMxml.so - install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/bd - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/libcmtkNumerics.so debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/bd/2797896445f075d8f5924b3634c1b5f637e49c.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/bd/2797896445f075d8f5924b3634c1b5f637e49c.debug - chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/bd/2797896445f075d8f5924b3634c1b5f637e49c.debug - strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/cmtk/usr/lib/cmtk/libcmtkNumerics.so - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/bd/2797896445f075d8f5924b3634c1b5f637e49c.debug debian/cmtk/usr/lib/cmtk/libcmtkNumerics.so - install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/9a - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/libcmtkRegistration.so debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/9a/100689ab4b5fb82565e884370a7369fcd5fa21.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/9a/100689ab4b5fb82565e884370a7369fcd5fa21.debug - chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/9a/100689ab4b5fb82565e884370a7369fcd5fa21.debug - strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/cmtk/usr/lib/cmtk/libcmtkRegistration.so - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/9a/100689ab4b5fb82565e884370a7369fcd5fa21.debug debian/cmtk/usr/lib/cmtk/libcmtkRegistration.so install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/59 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/libcmtkIO.so debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/59/6f860caea18104b07bbb61f547445c59ee78e0.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/59/6f860caea18104b07bbb61f547445c59ee78e0.debug chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/59/6f860caea18104b07bbb61f547445c59ee78e0.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/cmtk/usr/lib/cmtk/libcmtkIO.so objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/59/6f860caea18104b07bbb61f547445c59ee78e0.debug debian/cmtk/usr/lib/cmtk/libcmtkIO.so + install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/85 + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/libcmtkBase.so debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/85/a0590485bd15494a0c56bc6f920101c83e43a2.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/85/a0590485bd15494a0c56bc6f920101c83e43a2.debug + chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/85/a0590485bd15494a0c56bc6f920101c83e43a2.debug + strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/cmtk/usr/lib/cmtk/libcmtkBase.so + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/85/a0590485bd15494a0c56bc6f920101c83e43a2.debug debian/cmtk/usr/lib/cmtk/libcmtkBase.so install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/66 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/libcmtkRecon.so debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/66/1fd35bad81b6e6232fb4299eb29a55e275ffd0.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/66/1fd35bad81b6e6232fb4299eb29a55e275ffd0.debug chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/66/1fd35bad81b6e6232fb4299eb29a55e275ffd0.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/cmtk/usr/lib/cmtk/libcmtkRecon.so objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/66/1fd35bad81b6e6232fb4299eb29a55e275ffd0.debug debian/cmtk/usr/lib/cmtk/libcmtkRecon.so + install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/2b + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/libNrrdIO.so debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/2b/353d0cc667b9db6ea9ee4ed732ee978ee220f6.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/2b/353d0cc667b9db6ea9ee4ed732ee978ee220f6.debug + chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/2b/353d0cc667b9db6ea9ee4ed732ee978ee220f6.debug + strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/cmtk/usr/lib/cmtk/libNrrdIO.so + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/2b/353d0cc667b9db6ea9ee4ed732ee978ee220f6.debug debian/cmtk/usr/lib/cmtk/libNrrdIO.so + install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/9a + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/libcmtkRegistration.so debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/9a/100689ab4b5fb82565e884370a7369fcd5fa21.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/9a/100689ab4b5fb82565e884370a7369fcd5fa21.debug + chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/9a/100689ab4b5fb82565e884370a7369fcd5fa21.debug + strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/cmtk/usr/lib/cmtk/libcmtkRegistration.so + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/9a/100689ab4b5fb82565e884370a7369fcd5fa21.debug debian/cmtk/usr/lib/cmtk/libcmtkRegistration.so install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/4f objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/libcmtkSegmentation.so debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/4f/a9570ee5934bb30baf19cbc713b151bbc29ffb.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/4f/a9570ee5934bb30baf19cbc713b151bbc29ffb.debug @@ -6267,497 +6305,509 @@ chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/52/a61a537f15032d16f0ff259fdecf6681c3babb.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/cmtk/usr/lib/cmtk/libcmtkSystem.so objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/52/a61a537f15032d16f0ff259fdecf6681c3babb.debug debian/cmtk/usr/lib/cmtk/libcmtkSystem.so - install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e1 - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/asegment debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e1/8ce08ed39a2bf5a9066ce3e36480bcafb7801d.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e1/8ce08ed39a2bf5a9066ce3e36480bcafb7801d.debug - chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e1/8ce08ed39a2bf5a9066ce3e36480bcafb7801d.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/asegment - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e1/8ce08ed39a2bf5a9066ce3e36480bcafb7801d.debug debian/cmtk/usr/lib/cmtk/bin/asegment - install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/dd - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/mat2dof debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/dd/ecbc11da799c5f3d2742962fe8e1778451327d.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/dd/ecbc11da799c5f3d2742962fe8e1778451327d.debug - chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/dd/ecbc11da799c5f3d2742962fe8e1778451327d.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/mat2dof - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/dd/ecbc11da799c5f3d2742962fe8e1778451327d.debug debian/cmtk/usr/lib/cmtk/bin/mat2dof - install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f5 - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/concat_affine debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f5/47614acde015fbc7a260c266c4becd92885447.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f5/47614acde015fbc7a260c266c4becd92885447.debug - chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f5/47614acde015fbc7a260c266c4becd92885447.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/concat_affine - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f5/47614acde015fbc7a260c266c4becd92885447.debug debian/cmtk/usr/lib/cmtk/bin/concat_affine - install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/c2 - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/xform2scalar debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/c2/9874cc04e693aaa96667a7b2554f674004ce36.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/c2/9874cc04e693aaa96667a7b2554f674004ce36.debug - chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/c2/9874cc04e693aaa96667a7b2554f674004ce36.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/xform2scalar - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/c2/9874cc04e693aaa96667a7b2554f674004ce36.debug debian/cmtk/usr/lib/cmtk/bin/xform2scalar - install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/a5 - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/reformatx debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/a5/11bcdb277df3d105de44aab383b68f480ccda4.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/a5/11bcdb277df3d105de44aab383b68f480ccda4.debug - chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/a5/11bcdb277df3d105de44aab383b68f480ccda4.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/reformatx - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/a5/11bcdb277df3d105de44aab383b68f480ccda4.debug debian/cmtk/usr/lib/cmtk/bin/reformatx - install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f3 - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/lvote debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f3/46e59f4a82140c8ecc98965357325f71e0beef.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f3/46e59f4a82140c8ecc98965357325f71e0beef.debug - chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f3/46e59f4a82140c8ecc98965357325f71e0beef.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/lvote - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f3/46e59f4a82140c8ecc98965357325f71e0beef.debug debian/cmtk/usr/lib/cmtk/bin/lvote - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/imagemath debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e1/4ec59992f38879582b2f2e933066ea7614aa06.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e1/4ec59992f38879582b2f2e933066ea7614aa06.debug - chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e1/4ec59992f38879582b2f2e933066ea7614aa06.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/imagemath - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e1/4ec59992f38879582b2f2e933066ea7614aa06.debug debian/cmtk/usr/lib/cmtk/bin/imagemath - install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/8a - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/overlap debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/8a/7298c6fd60263c30208180e56845d3764c3f7a.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/8a/7298c6fd60263c30208180e56845d3764c3f7a.debug - chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/8a/7298c6fd60263c30208180e56845d3764c3f7a.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/overlap - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/8a/7298c6fd60263c30208180e56845d3764c3f7a.debug debian/cmtk/usr/lib/cmtk/bin/overlap - install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/03 - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/hausdorff debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/03/1aed0bc5375c7264a0a3b3f85a17ad92ca59d5.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/03/1aed0bc5375c7264a0a3b3f85a17ad92ca59d5.debug - chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/03/1aed0bc5375c7264a0a3b3f85a17ad92ca59d5.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/hausdorff - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/03/1aed0bc5375c7264a0a3b3f85a17ad92ca59d5.debug debian/cmtk/usr/lib/cmtk/bin/hausdorff - install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e6 - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/registrationx debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e6/d770cf7a2098bc2f3bee0035487437f8dd13c8.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e6/d770cf7a2098bc2f3bee0035487437f8dd13c8.debug - chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e6/d770cf7a2098bc2f3bee0035487437f8dd13c8.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/registrationx - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e6/d770cf7a2098bc2f3bee0035487437f8dd13c8.debug debian/cmtk/usr/lib/cmtk/bin/registrationx - install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/3c - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/detect_adni_phantom debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/3c/133cd3102a4bf617a038999602e63cafbd883a.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/3c/133cd3102a4bf617a038999602e63cafbd883a.debug - chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/3c/133cd3102a4bf617a038999602e63cafbd883a.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/detect_adni_phantom - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/3c/133cd3102a4bf617a038999602e63cafbd883a.debug debian/cmtk/usr/lib/cmtk/bin/detect_adni_phantom - install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e9 - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/warpx debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e9/56ef5869359c4a20533a43eef1d6beb5259e9c.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e9/56ef5869359c4a20533a43eef1d6beb5259e9c.debug - chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e9/56ef5869359c4a20533a43eef1d6beb5259e9c.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/warpx - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e9/56ef5869359c4a20533a43eef1d6beb5259e9c.debug debian/cmtk/usr/lib/cmtk/bin/warpx + install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/13 + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/libcmtkMxml.so debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/13/95edfe4bebac7854d0c9e04a283948e302f95c.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/13/95edfe4bebac7854d0c9e04a283948e302f95c.debug + chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/13/95edfe4bebac7854d0c9e04a283948e302f95c.debug + strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/cmtk/usr/lib/cmtk/libcmtkMxml.so + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/13/95edfe4bebac7854d0c9e04a283948e302f95c.debug debian/cmtk/usr/lib/cmtk/libcmtkMxml.so + install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/bd + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/libcmtkNumerics.so debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/bd/2797896445f075d8f5924b3634c1b5f637e49c.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/bd/2797896445f075d8f5924b3634c1b5f637e49c.debug + chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/bd/2797896445f075d8f5924b3634c1b5f637e49c.debug + strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/cmtk/usr/lib/cmtk/libcmtkNumerics.so + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/bd/2797896445f075d8f5924b3634c1b5f637e49c.debug debian/cmtk/usr/lib/cmtk/libcmtkNumerics.so + install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/91 + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/similarity debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/91/563380e92589318013ddd5c2fe902127d21833.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/91/563380e92589318013ddd5c2fe902127d21833.debug + chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/91/563380e92589318013ddd5c2fe902127d21833.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/similarity + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/91/563380e92589318013ddd5c2fe902127d21833.debug debian/cmtk/usr/lib/cmtk/bin/similarity + install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/a3 + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/sequence debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/a3/0443a9e1743a5fd15f87c68540a22bc0a2f29a.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/a3/0443a9e1743a5fd15f87c68540a22bc0a2f29a.debug + chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/a3/0443a9e1743a5fd15f87c68540a22bc0a2f29a.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/sequence + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/a3/0443a9e1743a5fd15f87c68540a22bc0a2f29a.debug debian/cmtk/usr/lib/cmtk/bin/sequence install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/2d objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/fit_spline_dfield debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/2d/ed9c69c8b4eaaaf058ee61a59c0c3a6ef72fc9.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/2d/ed9c69c8b4eaaaf058ee61a59c0c3a6ef72fc9.debug chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/2d/ed9c69c8b4eaaaf058ee61a59c0c3a6ef72fc9.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/fit_spline_dfield objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/2d/ed9c69c8b4eaaaf058ee61a59c0c3a6ef72fc9.debug debian/cmtk/usr/lib/cmtk/bin/fit_spline_dfield - install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/80 - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/pxsearch debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/80/36d8a1dd4ccd8546f5f5586507d7372e210f96.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/80/36d8a1dd4ccd8546f5f5586507d7372e210f96.debug - chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/80/36d8a1dd4ccd8546f5f5586507d7372e210f96.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/pxsearch - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/80/36d8a1dd4ccd8546f5f5586507d7372e210f96.debug debian/cmtk/usr/lib/cmtk/bin/pxsearch - install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/ae - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/film debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/ae/c840c559fa3499d21044397b92705abeac4b1c.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/ae/c840c559fa3499d21044397b92705abeac4b1c.debug - chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/ae/c840c559fa3499d21044397b92705abeac4b1c.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/film - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/ae/c840c559fa3499d21044397b92705abeac4b1c.debug debian/cmtk/usr/lib/cmtk/bin/film + install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/97 + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/gregxform debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/97/6e806721e39064e0085795dd182851122e1cae.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/97/6e806721e39064e0085795dd182851122e1cae.debug + chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/97/6e806721e39064e0085795dd182851122e1cae.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/gregxform + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/97/6e806721e39064e0085795dd182851122e1cae.debug debian/cmtk/usr/lib/cmtk/bin/gregxform + install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e9 + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/warpx debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e9/56ef5869359c4a20533a43eef1d6beb5259e9c.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e9/56ef5869359c4a20533a43eef1d6beb5259e9c.debug + chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e9/56ef5869359c4a20533a43eef1d6beb5259e9c.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/warpx + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e9/56ef5869359c4a20533a43eef1d6beb5259e9c.debug debian/cmtk/usr/lib/cmtk/bin/warpx + install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/03 + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/hausdorff debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/03/1aed0bc5375c7264a0a3b3f85a17ad92ca59d5.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/03/1aed0bc5375c7264a0a3b3f85a17ad92ca59d5.debug + chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/03/1aed0bc5375c7264a0a3b3f85a17ad92ca59d5.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/hausdorff + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/03/1aed0bc5375c7264a0a3b3f85a17ad92ca59d5.debug debian/cmtk/usr/lib/cmtk/bin/hausdorff + install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/b2 + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/volume_injection debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/b2/937baa8812abe506c5364045aa535f44204628.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/b2/937baa8812abe506c5364045aa535f44204628.debug + chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/b2/937baa8812abe506c5364045aa535f44204628.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/volume_injection + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/b2/937baa8812abe506c5364045aa535f44204628.debug debian/cmtk/usr/lib/cmtk/bin/volume_injection + install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/74 + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/symplx debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/74/9195517ad9dfcfd7896d8bfe81775945c5ff09.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/74/9195517ad9dfcfd7896d8bfe81775945c5ff09.debug + chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/74/9195517ad9dfcfd7896d8bfe81775945c5ff09.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/symplx + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/74/9195517ad9dfcfd7896d8bfe81775945c5ff09.debug debian/cmtk/usr/lib/cmtk/bin/symplx + install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/8e + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/vtkxform debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/8e/fa22f553cc0c84da8202e58f08420bcc5e3e74.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/8e/fa22f553cc0c84da8202e58f08420bcc5e3e74.debug + chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/8e/fa22f553cc0c84da8202e58f08420bcc5e3e74.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/vtkxform + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/8e/fa22f553cc0c84da8202e58f08420bcc5e3e74.debug debian/cmtk/usr/lib/cmtk/bin/vtkxform + install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/fb + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/mk_phantom_3d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/fb/24428a6e8d0354abf51d2626bf31906d0740e1.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/fb/24428a6e8d0354abf51d2626bf31906d0740e1.debug + chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/fb/24428a6e8d0354abf51d2626bf31906d0740e1.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/mk_phantom_3d + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/fb/24428a6e8d0354abf51d2626bf31906d0740e1.debug debian/cmtk/usr/lib/cmtk/bin/mk_phantom_3d + install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/da + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/fit_affine_xform debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/da/e8d3af7cc90db2bc88b16c7b0d8c75ca51ef1d.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/da/e8d3af7cc90db2bc88b16c7b0d8c75ca51ef1d.debug + chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/da/e8d3af7cc90db2bc88b16c7b0d8c75ca51ef1d.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/fit_affine_xform + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/da/e8d3af7cc90db2bc88b16c7b0d8c75ca51ef1d.debug debian/cmtk/usr/lib/cmtk/bin/fit_affine_xform + install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/dd + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/mat2dof debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/dd/ecbc11da799c5f3d2742962fe8e1778451327d.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/dd/ecbc11da799c5f3d2742962fe8e1778451327d.debug + chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/dd/ecbc11da799c5f3d2742962fe8e1778451327d.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/mat2dof + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/dd/ecbc11da799c5f3d2742962fe8e1778451327d.debug debian/cmtk/usr/lib/cmtk/bin/mat2dof + install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/07 + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/average_images debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/07/a60dd9653a1e3ef18f7b5463c6b0d82cb54789.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/07/a60dd9653a1e3ef18f7b5463c6b0d82cb54789.debug + chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/07/a60dd9653a1e3ef18f7b5463c6b0d82cb54789.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/average_images + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/07/a60dd9653a1e3ef18f7b5463c6b0d82cb54789.debug debian/cmtk/usr/lib/cmtk/bin/average_images install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/72 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/stream_pixels debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/72/49046b8bd0c9657c615837ef9aa88b43b5304e.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/72/49046b8bd0c9657c615837ef9aa88b43b5304e.debug chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/72/49046b8bd0c9657c615837ef9aa88b43b5304e.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/stream_pixels objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/72/49046b8bd0c9657c615837ef9aa88b43b5304e.debug debian/cmtk/usr/lib/cmtk/bin/stream_pixels - install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/bc - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/destripe debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/bc/d98a5af1b05a5ac47e1c68ba7052149a68add0.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/bc/d98a5af1b05a5ac47e1c68ba7052149a68add0.debug - chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/bc/d98a5af1b05a5ac47e1c68ba7052149a68add0.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/destripe - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/bc/d98a5af1b05a5ac47e1c68ba7052149a68add0.debug debian/cmtk/usr/lib/cmtk/bin/destripe + install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e1 + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/asegment debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e1/8ce08ed39a2bf5a9066ce3e36480bcafb7801d.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e1/8ce08ed39a2bf5a9066ce3e36480bcafb7801d.debug + chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e1/8ce08ed39a2bf5a9066ce3e36480bcafb7801d.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/asegment + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e1/8ce08ed39a2bf5a9066ce3e36480bcafb7801d.debug debian/cmtk/usr/lib/cmtk/bin/asegment install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/08 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/make_initial_affine debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/08/ac5a17a3cd4eec565fc162dc84f5436c891c2e.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/08/ac5a17a3cd4eec565fc162dc84f5436c891c2e.debug chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/08/ac5a17a3cd4eec565fc162dc84f5436c891c2e.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/make_initial_affine objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/08/ac5a17a3cd4eec565fc162dc84f5436c891c2e.debug debian/cmtk/usr/lib/cmtk/bin/make_initial_affine - install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/fc - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/asegment_sri24 debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/fc/882f73621b4c73ff62fbe80b1768dfe09243c7.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/fc/882f73621b4c73ff62fbe80b1768dfe09243c7.debug - chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/fc/882f73621b4c73ff62fbe80b1768dfe09243c7.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/asegment_sri24 - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/fc/882f73621b4c73ff62fbe80b1768dfe09243c7.debug debian/cmtk/usr/lib/cmtk/bin/asegment_sri24 - install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/10 - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/detect_spheres_matched_filter debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/10/937ed880d1559e7500bb672aebfd6a1ae31da3.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/10/937ed880d1559e7500bb672aebfd6a1ae31da3.debug - chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/10/937ed880d1559e7500bb672aebfd6a1ae31da3.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/detect_spheres_matched_filter - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/10/937ed880d1559e7500bb672aebfd6a1ae31da3.debug debian/cmtk/usr/lib/cmtk/bin/detect_spheres_matched_filter - install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/a8 - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/vol2csv debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/a8/f44a2ecab5b708054d3b66dda1143292ea5039.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/a8/f44a2ecab5b708054d3b66dda1143292ea5039.debug - chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/a8/f44a2ecab5b708054d3b66dda1143292ea5039.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/vol2csv - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/a8/f44a2ecab5b708054d3b66dda1143292ea5039.debug debian/cmtk/usr/lib/cmtk/bin/vol2csv - install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/58 - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/gmm debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/58/e264d0754e3030afcfa156f117814e5fe80738.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/58/e264d0754e3030afcfa156f117814e5fe80738.debug - chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/58/e264d0754e3030afcfa156f117814e5fe80738.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/gmm - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/58/e264d0754e3030afcfa156f117814e5fe80738.debug debian/cmtk/usr/lib/cmtk/bin/gmm - install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/97 - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/gregxform debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/97/6e806721e39064e0085795dd182851122e1cae.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/97/6e806721e39064e0085795dd182851122e1cae.debug - chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/97/6e806721e39064e0085795dd182851122e1cae.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/gregxform - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/97/6e806721e39064e0085795dd182851122e1cae.debug debian/cmtk/usr/lib/cmtk/bin/gregxform + install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/67 + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/mk_analyze_hdr debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/67/facc61fdb7903f9b646f0a84b8aa9d35377942.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/67/facc61fdb7903f9b646f0a84b8aa9d35377942.debug + chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/67/facc61fdb7903f9b646f0a84b8aa9d35377942.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/mk_analyze_hdr + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/67/facc61fdb7903f9b646f0a84b8aa9d35377942.debug debian/cmtk/usr/lib/cmtk/bin/mk_analyze_hdr + install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/a0 + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/fit_affine_xform_landmarks debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/a0/2d98b700fa9d568c7caf1a3e4a8553e552386e.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/a0/2d98b700fa9d568c7caf1a3e4a8553e552386e.debug + chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/a0/2d98b700fa9d568c7caf1a3e4a8553e552386e.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/fit_affine_xform_landmarks + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/a0/2d98b700fa9d568c7caf1a3e4a8553e552386e.debug debian/cmtk/usr/lib/cmtk/bin/fit_affine_xform_landmarks + install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/bc + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/groupwise_warp debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/bc/42669b2ea61f3e402727920ad8e2fbffbeaa31.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/bc/42669b2ea61f3e402727920ad8e2fbffbeaa31.debug + chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/bc/42669b2ea61f3e402727920ad8e2fbffbeaa31.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/groupwise_warp + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/bc/42669b2ea61f3e402727920ad8e2fbffbeaa31.debug debian/cmtk/usr/lib/cmtk/bin/groupwise_warp + install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/46 + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/geomatch debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/46/822c4d553bcd0406850e6987f81b562d5791a0.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/46/822c4d553bcd0406850e6987f81b562d5791a0.debug + chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/46/822c4d553bcd0406850e6987f81b562d5791a0.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/geomatch + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/46/822c4d553bcd0406850e6987f81b562d5791a0.debug debian/cmtk/usr/lib/cmtk/bin/geomatch + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/mk_nifti_hdr debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/2d/92987e9f2c949d3beb3d883e2f53eedd8a7dd9.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/2d/92987e9f2c949d3beb3d883e2f53eedd8a7dd9.debug + chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/2d/92987e9f2c949d3beb3d883e2f53eedd8a7dd9.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/mk_nifti_hdr + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/2d/92987e9f2c949d3beb3d883e2f53eedd8a7dd9.debug debian/cmtk/usr/lib/cmtk/bin/mk_nifti_hdr + install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f3 + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/lvote debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f3/46e59f4a82140c8ecc98965357325f71e0beef.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f3/46e59f4a82140c8ecc98965357325f71e0beef.debug + chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f3/46e59f4a82140c8ecc98965357325f71e0beef.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/lvote + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f3/46e59f4a82140c8ecc98965357325f71e0beef.debug debian/cmtk/usr/lib/cmtk/bin/lvote install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/d3 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/unsplit debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/d3/c64fa39a9cfbb3ff8806bcdea294e53578a392.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/d3/c64fa39a9cfbb3ff8806bcdea294e53578a392.debug chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/d3/c64fa39a9cfbb3ff8806bcdea294e53578a392.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/unsplit objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/d3/c64fa39a9cfbb3ff8806bcdea294e53578a392.debug debian/cmtk/usr/lib/cmtk/bin/unsplit - install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/1a - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/jidb debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/1a/a3b3d20054552a9c1326ac4edcf97716822d23.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/1a/a3b3d20054552a9c1326ac4edcf97716822d23.debug - chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/1a/a3b3d20054552a9c1326ac4edcf97716822d23.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/jidb - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/1a/a3b3d20054552a9c1326ac4edcf97716822d23.debug debian/cmtk/usr/lib/cmtk/bin/jidb + install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/33 + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/describe debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/33/5067af08db50e253d9f38fdcf48cca60c45aa8.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/33/5067af08db50e253d9f38fdcf48cca60c45aa8.debug + chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/33/5067af08db50e253d9f38fdcf48cca60c45aa8.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/describe + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/33/5067af08db50e253d9f38fdcf48cca60c45aa8.debug debian/cmtk/usr/lib/cmtk/bin/describe + install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/c4 + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/regress debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/c4/cb18be71b6a9b600f1758c8f8d0d6750a4651c.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/c4/cb18be71b6a9b600f1758c8f8d0d6750a4651c.debug + chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/c4/cb18be71b6a9b600f1758c8f8d0d6750a4651c.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/regress + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/c4/cb18be71b6a9b600f1758c8f8d0d6750a4651c.debug debian/cmtk/usr/lib/cmtk/bin/regress + install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/d4 + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/avg_adm debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/d4/3f0fa6795d4d0fccb225d30b3d93a3cb790c10.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/d4/3f0fa6795d4d0fccb225d30b3d93a3cb790c10.debug + chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/d4/3f0fa6795d4d0fccb225d30b3d93a3cb790c10.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/avg_adm + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/d4/3f0fa6795d4d0fccb225d30b3d93a3cb790c10.debug debian/cmtk/usr/lib/cmtk/bin/avg_adm + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/groupwise_init debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/66/4b024ec39073f88ebd95dff16a930cebe77838.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/66/4b024ec39073f88ebd95dff16a930cebe77838.debug + chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/66/4b024ec39073f88ebd95dff16a930cebe77838.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/groupwise_init + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/66/4b024ec39073f88ebd95dff16a930cebe77838.debug debian/cmtk/usr/lib/cmtk/bin/groupwise_init + install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/fc + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/asegment_sri24 debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/fc/882f73621b4c73ff62fbe80b1768dfe09243c7.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/fc/882f73621b4c73ff62fbe80b1768dfe09243c7.debug + chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/fc/882f73621b4c73ff62fbe80b1768dfe09243c7.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/asegment_sri24 + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/fc/882f73621b4c73ff62fbe80b1768dfe09243c7.debug debian/cmtk/usr/lib/cmtk/bin/asegment_sri24 + install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/05 + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/dcm2image debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/05/5d2329006540ccc6c6c30ea85276c49a7e6534.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/05/5d2329006540ccc6c6c30ea85276c49a7e6534.debug + chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/05/5d2329006540ccc6c6c30ea85276c49a7e6534.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/dcm2image + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/05/5d2329006540ccc6c6c30ea85276c49a7e6534.debug debian/cmtk/usr/lib/cmtk/bin/dcm2image + install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/17 + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/mcaffine debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/17/5fd5b96fd6ded3098767f0a1d4a7ded34864e8.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/17/5fd5b96fd6ded3098767f0a1d4a7ded34864e8.debug + chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/17/5fd5b96fd6ded3098767f0a1d4a7ded34864e8.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/mcaffine + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/17/5fd5b96fd6ded3098767f0a1d4a7ded34864e8.debug debian/cmtk/usr/lib/cmtk/bin/mcaffine + install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/9c + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/sympl debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/9c/0795e3ed09e83375ee70afb68bd2bcd478d5ab.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/9c/0795e3ed09e83375ee70afb68bd2bcd478d5ab.debug + chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/9c/0795e3ed09e83375ee70afb68bd2bcd478d5ab.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/sympl + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/9c/0795e3ed09e83375ee70afb68bd2bcd478d5ab.debug debian/cmtk/usr/lib/cmtk/bin/sympl + install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/92 + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/groupwise_affine debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/92/8a4bdca575d1b1f10fe2408127bdb87e207969.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/92/8a4bdca575d1b1f10fe2408127bdb87e207969.debug + chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/92/8a4bdca575d1b1f10fe2408127bdb87e207969.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/groupwise_affine + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/92/8a4bdca575d1b1f10fe2408127bdb87e207969.debug debian/cmtk/usr/lib/cmtk/bin/groupwise_affine + install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/c2 + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/xform2scalar debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/c2/9874cc04e693aaa96667a7b2554f674004ce36.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/c2/9874cc04e693aaa96667a7b2554f674004ce36.debug + chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/c2/9874cc04e693aaa96667a7b2554f674004ce36.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/xform2scalar + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/c2/9874cc04e693aaa96667a7b2554f674004ce36.debug debian/cmtk/usr/lib/cmtk/bin/xform2scalar + install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/2e + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/histogram debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/2e/fc0cdf079de95af254591224940258554d1ee9.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/2e/fc0cdf079de95af254591224940258554d1ee9.debug + chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/2e/fc0cdf079de95af254591224940258554d1ee9.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/histogram + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/2e/fc0cdf079de95af254591224940258554d1ee9.debug debian/cmtk/usr/lib/cmtk/bin/histogram + install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/84 + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/fib2image debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/84/2a1fdeb1094f9dbbe15a87ae58f923cb76b359.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/84/2a1fdeb1094f9dbbe15a87ae58f923cb76b359.debug + chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/84/2a1fdeb1094f9dbbe15a87ae58f923cb76b359.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/fib2image + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/84/2a1fdeb1094f9dbbe15a87ae58f923cb76b359.debug debian/cmtk/usr/lib/cmtk/bin/fib2image install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/98 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/fibxform debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/98/cd557a74b99c439448c31d4c3100886c0aac5e.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/98/cd557a74b99c439448c31d4c3100886c0aac5e.debug chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/98/cd557a74b99c439448c31d4c3100886c0aac5e.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/fibxform objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/98/cd557a74b99c439448c31d4c3100886c0aac5e.debug debian/cmtk/usr/lib/cmtk/bin/fibxform - install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/d0 - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/xform2dfield debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/d0/436f2b45df46b8692d9d0c7c9aeb9fa9295724.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/d0/436f2b45df46b8692d9d0c7c9aeb9fa9295724.debug - chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/d0/436f2b45df46b8692d9d0c7c9aeb9fa9295724.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/xform2dfield - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/d0/436f2b45df46b8692d9d0c7c9aeb9fa9295724.debug debian/cmtk/usr/lib/cmtk/bin/xform2dfield + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/imagemath debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e1/4ec59992f38879582b2f2e933066ea7614aa06.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e1/4ec59992f38879582b2f2e933066ea7614aa06.debug + chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e1/4ec59992f38879582b2f2e933066ea7614aa06.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/imagemath + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e1/4ec59992f38879582b2f2e933066ea7614aa06.debug debian/cmtk/usr/lib/cmtk/bin/imagemath + install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/10 + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/detect_spheres_matched_filter debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/10/937ed880d1559e7500bb672aebfd6a1ae31da3.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/10/937ed880d1559e7500bb672aebfd6a1ae31da3.debug + chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/10/937ed880d1559e7500bb672aebfd6a1ae31da3.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/detect_spheres_matched_filter + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/10/937ed880d1559e7500bb672aebfd6a1ae31da3.debug debian/cmtk/usr/lib/cmtk/bin/detect_spheres_matched_filter install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/88 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/interleaved_bad_slices debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/88/e3572d370b9f3a78f57b42eaf3a41307873f89.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/88/e3572d370b9f3a78f57b42eaf3a41307873f89.debug chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/88/e3572d370b9f3a78f57b42eaf3a41307873f89.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/interleaved_bad_slices objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/88/e3572d370b9f3a78f57b42eaf3a41307873f89.debug debian/cmtk/usr/lib/cmtk/bin/interleaved_bad_slices - install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/a3 - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/sequence debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/a3/0443a9e1743a5fd15f87c68540a22bc0a2f29a.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/a3/0443a9e1743a5fd15f87c68540a22bc0a2f29a.debug - chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/a3/0443a9e1743a5fd15f87c68540a22bc0a2f29a.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/sequence - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/a3/0443a9e1743a5fd15f87c68540a22bc0a2f29a.debug debian/cmtk/usr/lib/cmtk/bin/sequence - install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/22 - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/mrbias debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/22/491e0b2b95a4cde6ad7ce73364a778ee03dddb.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/22/491e0b2b95a4cde6ad7ce73364a778ee03dddb.debug - chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/22/491e0b2b95a4cde6ad7ce73364a778ee03dddb.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/mrbias - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/22/491e0b2b95a4cde6ad7ce73364a778ee03dddb.debug debian/cmtk/usr/lib/cmtk/bin/mrbias + install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/73 + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/epiunwarp debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/73/3e61dc8eb8ded74870c07cdf79b0ffef14eb63.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/73/3e61dc8eb8ded74870c07cdf79b0ffef14eb63.debug + chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/73/3e61dc8eb8ded74870c07cdf79b0ffef14eb63.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/epiunwarp + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/73/3e61dc8eb8ded74870c07cdf79b0ffef14eb63.debug debian/cmtk/usr/lib/cmtk/bin/epiunwarp + install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e6 + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/registrationx debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e6/d770cf7a2098bc2f3bee0035487437f8dd13c8.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e6/d770cf7a2098bc2f3bee0035487437f8dd13c8.debug + chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e6/d770cf7a2098bc2f3bee0035487437f8dd13c8.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/registrationx + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e6/d770cf7a2098bc2f3bee0035487437f8dd13c8.debug debian/cmtk/usr/lib/cmtk/bin/registrationx + install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/65 + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/ttest debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/65/082176ed4d3d3f49ad9d8a2a8a342269824675.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/65/082176ed4d3d3f49ad9d8a2a8a342269824675.debug + chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/65/082176ed4d3d3f49ad9d8a2a8a342269824675.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/ttest + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/65/082176ed4d3d3f49ad9d8a2a8a342269824675.debug debian/cmtk/usr/lib/cmtk/bin/ttest + install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/8c + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/fit_affine_dfield debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/8c/dc2143ec8de19c32a0e46a0466be6d6f9df0f0.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/8c/dc2143ec8de19c32a0e46a0466be6d6f9df0f0.debug + chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/8c/dc2143ec8de19c32a0e46a0466be6d6f9df0f0.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/fit_affine_dfield + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/8c/dc2143ec8de19c32a0e46a0466be6d6f9df0f0.debug debian/cmtk/usr/lib/cmtk/bin/fit_affine_dfield + install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/1b + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/dwi_mask_bad_slices debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/1b/e2b935f48b14b8234493aaa1ca81fb16c17415.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/1b/e2b935f48b14b8234493aaa1ca81fb16c17415.debug + chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/1b/e2b935f48b14b8234493aaa1ca81fb16c17415.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/dwi_mask_bad_slices + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/1b/e2b935f48b14b8234493aaa1ca81fb16c17415.debug debian/cmtk/usr/lib/cmtk/bin/dwi_mask_bad_slices + install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/a8 + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/vol2csv debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/a8/f44a2ecab5b708054d3b66dda1143292ea5039.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/a8/f44a2ecab5b708054d3b66dda1143292ea5039.debug + chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/a8/f44a2ecab5b708054d3b66dda1143292ea5039.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/vol2csv + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/a8/f44a2ecab5b708054d3b66dda1143292ea5039.debug debian/cmtk/usr/lib/cmtk/bin/vol2csv + install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/47 + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/average_affine debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/47/e2f676880d1a32a09227133d80e157e04eafa2.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/47/e2f676880d1a32a09227133d80e157e04eafa2.debug + chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/47/e2f676880d1a32a09227133d80e157e04eafa2.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/average_affine + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/47/e2f676880d1a32a09227133d80e157e04eafa2.debug debian/cmtk/usr/lib/cmtk/bin/average_affine + install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/d6 + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/streamxform debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/d6/669d73af8bdf8f91f518db3cc0e49d8c0f8687.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/d6/669d73af8bdf8f91f518db3cc0e49d8c0f8687.debug + chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/d6/669d73af8bdf8f91f518db3cc0e49d8c0f8687.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/streamxform + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/d6/669d73af8bdf8f91f518db3cc0e49d8c0f8687.debug debian/cmtk/usr/lib/cmtk/bin/streamxform + install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/60 + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/dbtool debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/60/77c5340d8b24e6ec13e407324cdd2827510a7e.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/60/77c5340d8b24e6ec13e407324cdd2827510a7e.debug + chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/60/77c5340d8b24e6ec13e407324cdd2827510a7e.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/dbtool + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/60/77c5340d8b24e6ec13e407324cdd2827510a7e.debug debian/cmtk/usr/lib/cmtk/bin/dbtool + install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/a7 + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/xform2itk debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/a7/1b553ff28c3ff7cab97bda61826a021fe7dc1a.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/a7/1b553ff28c3ff7cab97bda61826a021fe7dc1a.debug + chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/a7/1b553ff28c3ff7cab97bda61826a021fe7dc1a.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/xform2itk + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/a7/1b553ff28c3ff7cab97bda61826a021fe7dc1a.debug debian/cmtk/usr/lib/cmtk/bin/xform2itk install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/dc objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/average_labels debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/dc/ca116c2f535891c820b9bf4a34e766fa6fe163.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/dc/ca116c2f535891c820b9bf4a34e766fa6fe163.debug chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/dc/ca116c2f535891c820b9bf4a34e766fa6fe163.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/average_labels objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/dc/ca116c2f535891c820b9bf4a34e766fa6fe163.debug debian/cmtk/usr/lib/cmtk/bin/average_labels - install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/46 - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/geomatch debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/46/822c4d553bcd0406850e6987f81b562d5791a0.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/46/822c4d553bcd0406850e6987f81b562d5791a0.debug - chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/46/822c4d553bcd0406850e6987f81b562d5791a0.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/geomatch - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/46/822c4d553bcd0406850e6987f81b562d5791a0.debug debian/cmtk/usr/lib/cmtk/bin/geomatch - install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/d4 - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/avg_adm debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/d4/3f0fa6795d4d0fccb225d30b3d93a3cb790c10.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/d4/3f0fa6795d4d0fccb225d30b3d93a3cb790c10.debug - chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/d4/3f0fa6795d4d0fccb225d30b3d93a3cb790c10.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/avg_adm - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/d4/3f0fa6795d4d0fccb225d30b3d93a3cb790c10.debug debian/cmtk/usr/lib/cmtk/bin/avg_adm - install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/92 - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/groupwise_affine debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/92/8a4bdca575d1b1f10fe2408127bdb87e207969.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/92/8a4bdca575d1b1f10fe2408127bdb87e207969.debug - chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/92/8a4bdca575d1b1f10fe2408127bdb87e207969.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/groupwise_affine - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/92/8a4bdca575d1b1f10fe2408127bdb87e207969.debug debian/cmtk/usr/lib/cmtk/bin/groupwise_affine - install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/81 - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/mk_adni_phantom debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/81/395d15a1db4685efee32b9470abc0cec2a2c11.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/81/395d15a1db4685efee32b9470abc0cec2a2c11.debug - chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/81/395d15a1db4685efee32b9470abc0cec2a2c11.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/mk_adni_phantom - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/81/395d15a1db4685efee32b9470abc0cec2a2c11.debug debian/cmtk/usr/lib/cmtk/bin/mk_adni_phantom install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f4 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/fit_spline_xform debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f4/b80435e55df7bdbb4182ddd9b60d57ca6358fe.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f4/b80435e55df7bdbb4182ddd9b60d57ca6358fe.debug chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f4/b80435e55df7bdbb4182ddd9b60d57ca6358fe.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/fit_spline_xform objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f4/b80435e55df7bdbb4182ddd9b60d57ca6358fe.debug debian/cmtk/usr/lib/cmtk/bin/fit_spline_xform - install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/74 - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/symplx debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/74/9195517ad9dfcfd7896d8bfe81775945c5ff09.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/74/9195517ad9dfcfd7896d8bfe81775945c5ff09.debug - chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/74/9195517ad9dfcfd7896d8bfe81775945c5ff09.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/symplx - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/74/9195517ad9dfcfd7896d8bfe81775945c5ff09.debug debian/cmtk/usr/lib/cmtk/bin/symplx - install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/47 - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/average_affine debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/47/e2f676880d1a32a09227133d80e157e04eafa2.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/47/e2f676880d1a32a09227133d80e157e04eafa2.debug - chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/47/e2f676880d1a32a09227133d80e157e04eafa2.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/average_affine - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/47/e2f676880d1a32a09227133d80e157e04eafa2.debug debian/cmtk/usr/lib/cmtk/bin/average_affine - install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/8c - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/fit_affine_dfield debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/8c/dc2143ec8de19c32a0e46a0466be6d6f9df0f0.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/8c/dc2143ec8de19c32a0e46a0466be6d6f9df0f0.debug - chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/8c/dc2143ec8de19c32a0e46a0466be6d6f9df0f0.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/fit_affine_dfield - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/8c/dc2143ec8de19c32a0e46a0466be6d6f9df0f0.debug debian/cmtk/usr/lib/cmtk/bin/fit_affine_dfield + install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f5 + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/concat_affine debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f5/47614acde015fbc7a260c266c4becd92885447.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f5/47614acde015fbc7a260c266c4becd92885447.debug + chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f5/47614acde015fbc7a260c266c4becd92885447.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/concat_affine + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f5/47614acde015fbc7a260c266c4becd92885447.debug debian/cmtk/usr/lib/cmtk/bin/concat_affine + install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/ac + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/unwarp_image_phantom debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/ac/055b16a69173fa835b36069e8200a0f4b90d26.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/ac/055b16a69173fa835b36069e8200a0f4b90d26.debug + chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/ac/055b16a69173fa835b36069e8200a0f4b90d26.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/unwarp_image_phantom + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/ac/055b16a69173fa835b36069e8200a0f4b90d26.debug debian/cmtk/usr/lib/cmtk/bin/unwarp_image_phantom + install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/80 + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/pxsearch debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/80/36d8a1dd4ccd8546f5f5586507d7372e210f96.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/80/36d8a1dd4ccd8546f5f5586507d7372e210f96.debug + chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/80/36d8a1dd4ccd8546f5f5586507d7372e210f96.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/pxsearch + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/80/36d8a1dd4ccd8546f5f5586507d7372e210f96.debug debian/cmtk/usr/lib/cmtk/bin/pxsearch install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/cf objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/dof2mat debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/cf/a789993271454c66657d345ec75c3c156bc665.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/cf/a789993271454c66657d345ec75c3c156bc665.debug chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/cf/a789993271454c66657d345ec75c3c156bc665.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/dof2mat objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/cf/a789993271454c66657d345ec75c3c156bc665.debug debian/cmtk/usr/lib/cmtk/bin/dof2mat - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/convertx debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/2b/b3d40bc1b5b47859780106e208bf4e8070edb8.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/2b/b3d40bc1b5b47859780106e208bf4e8070edb8.debug - chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/2b/b3d40bc1b5b47859780106e208bf4e8070edb8.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/convertx - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/2b/b3d40bc1b5b47859780106e208bf4e8070edb8.debug debian/cmtk/usr/lib/cmtk/bin/convertx + install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/d0 + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/xform2dfield debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/d0/436f2b45df46b8692d9d0c7c9aeb9fa9295724.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/d0/436f2b45df46b8692d9d0c7c9aeb9fa9295724.debug + chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/d0/436f2b45df46b8692d9d0c7c9aeb9fa9295724.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/xform2dfield + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/d0/436f2b45df46b8692d9d0c7c9aeb9fa9295724.debug debian/cmtk/usr/lib/cmtk/bin/xform2dfield + install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/58 + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/gmm debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/58/e264d0754e3030afcfa156f117814e5fe80738.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/58/e264d0754e3030afcfa156f117814e5fe80738.debug + chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/58/e264d0754e3030afcfa156f117814e5fe80738.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/gmm + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/58/e264d0754e3030afcfa156f117814e5fe80738.debug debian/cmtk/usr/lib/cmtk/bin/gmm install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/36 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/split debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/36/d010bc4369651ccf9da93ab4555f053d5776f3.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/36/d010bc4369651ccf9da93ab4555f053d5776f3.debug chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/36/d010bc4369651ccf9da93ab4555f053d5776f3.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/split objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/36/d010bc4369651ccf9da93ab4555f053d5776f3.debug debian/cmtk/usr/lib/cmtk/bin/split - install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/b2 - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/volume_injection debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/b2/937baa8812abe506c5364045aa535f44204628.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/b2/937baa8812abe506c5364045aa535f44204628.debug - chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/b2/937baa8812abe506c5364045aa535f44204628.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/volume_injection - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/b2/937baa8812abe506c5364045aa535f44204628.debug debian/cmtk/usr/lib/cmtk/bin/volume_injection - install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/67 - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/mk_analyze_hdr debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/67/facc61fdb7903f9b646f0a84b8aa9d35377942.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/67/facc61fdb7903f9b646f0a84b8aa9d35377942.debug - chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/67/facc61fdb7903f9b646f0a84b8aa9d35377942.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/mk_analyze_hdr - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/67/facc61fdb7903f9b646f0a84b8aa9d35377942.debug debian/cmtk/usr/lib/cmtk/bin/mk_analyze_hdr - install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/2e - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/histogram debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/2e/fc0cdf079de95af254591224940258554d1ee9.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/2e/fc0cdf079de95af254591224940258554d1ee9.debug - chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/2e/fc0cdf079de95af254591224940258554d1ee9.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/histogram - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/2e/fc0cdf079de95af254591224940258554d1ee9.debug debian/cmtk/usr/lib/cmtk/bin/histogram - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/probe debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/8a/f715df87491dc5acaa17aaca05daa77aaced58.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/8a/f715df87491dc5acaa17aaca05daa77aaced58.debug - chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/8a/f715df87491dc5acaa17aaca05daa77aaced58.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/probe - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/8a/f715df87491dc5acaa17aaca05daa77aaced58.debug debian/cmtk/usr/lib/cmtk/bin/probe - install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/07 - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/average_images debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/07/a60dd9653a1e3ef18f7b5463c6b0d82cb54789.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/07/a60dd9653a1e3ef18f7b5463c6b0d82cb54789.debug - chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/07/a60dd9653a1e3ef18f7b5463c6b0d82cb54789.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/average_images - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/07/a60dd9653a1e3ef18f7b5463c6b0d82cb54789.debug debian/cmtk/usr/lib/cmtk/bin/average_images + install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/8a + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/overlap debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/8a/7298c6fd60263c30208180e56845d3764c3f7a.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/8a/7298c6fd60263c30208180e56845d3764c3f7a.debug + chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/8a/7298c6fd60263c30208180e56845d3764c3f7a.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/overlap + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/8a/7298c6fd60263c30208180e56845d3764c3f7a.debug debian/cmtk/usr/lib/cmtk/bin/overlap + install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/a5 + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/reformatx debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/a5/11bcdb277df3d105de44aab383b68f480ccda4.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/a5/11bcdb277df3d105de44aab383b68f480ccda4.debug + chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/a5/11bcdb277df3d105de44aab383b68f480ccda4.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/reformatx + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/a5/11bcdb277df3d105de44aab383b68f480ccda4.debug debian/cmtk/usr/lib/cmtk/bin/reformatx + install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/ae + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/film debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/ae/c840c559fa3499d21044397b92705abeac4b1c.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/ae/c840c559fa3499d21044397b92705abeac4b1c.debug + chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/ae/c840c559fa3499d21044397b92705abeac4b1c.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/film + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/ae/c840c559fa3499d21044397b92705abeac4b1c.debug debian/cmtk/usr/lib/cmtk/bin/film + install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/4d + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/convert_warp debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/4d/f7e69d8732ec4df548403dd61ca507c9e21d83.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/4d/f7e69d8732ec4df548403dd61ca507c9e21d83.debug + chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/4d/f7e69d8732ec4df548403dd61ca507c9e21d83.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/convert_warp + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/4d/f7e69d8732ec4df548403dd61ca507c9e21d83.debug debian/cmtk/usr/lib/cmtk/bin/convert_warp install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/c1 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/glm debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/c1/e93e635db137957d5bca1e84fcd173134ff7e8.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/c1/e93e635db137957d5bca1e84fcd173134ff7e8.debug chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/c1/e93e635db137957d5bca1e84fcd173134ff7e8.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/glm objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/c1/e93e635db137957d5bca1e84fcd173134ff7e8.debug debian/cmtk/usr/lib/cmtk/bin/glm - install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/d6 - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/streamxform debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/d6/669d73af8bdf8f91f518db3cc0e49d8c0f8687.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/d6/669d73af8bdf8f91f518db3cc0e49d8c0f8687.debug - chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/d6/669d73af8bdf8f91f518db3cc0e49d8c0f8687.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/streamxform - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/d6/669d73af8bdf8f91f518db3cc0e49d8c0f8687.debug debian/cmtk/usr/lib/cmtk/bin/streamxform - install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/a7 - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/xform2itk debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/a7/1b553ff28c3ff7cab97bda61826a021fe7dc1a.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/a7/1b553ff28c3ff7cab97bda61826a021fe7dc1a.debug - chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/a7/1b553ff28c3ff7cab97bda61826a021fe7dc1a.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/xform2itk - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/a7/1b553ff28c3ff7cab97bda61826a021fe7dc1a.debug debian/cmtk/usr/lib/cmtk/bin/xform2itk - install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/05 - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/dcm2image debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/05/5d2329006540ccc6c6c30ea85276c49a7e6534.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/05/5d2329006540ccc6c6c30ea85276c49a7e6534.debug - chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/05/5d2329006540ccc6c6c30ea85276c49a7e6534.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/dcm2image - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/05/5d2329006540ccc6c6c30ea85276c49a7e6534.debug debian/cmtk/usr/lib/cmtk/bin/dcm2image - install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/ac - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/unwarp_image_phantom debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/ac/055b16a69173fa835b36069e8200a0f4b90d26.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/ac/055b16a69173fa835b36069e8200a0f4b90d26.debug - chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/ac/055b16a69173fa835b36069e8200a0f4b90d26.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/unwarp_image_phantom - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/ac/055b16a69173fa835b36069e8200a0f4b90d26.debug debian/cmtk/usr/lib/cmtk/bin/unwarp_image_phantom + install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/ee + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/lsba debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/ee/74fe820e114ba618c42e6b5a3e7a6e40dbada7.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/ee/74fe820e114ba618c42e6b5a3e7a6e40dbada7.debug + chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/ee/74fe820e114ba618c42e6b5a3e7a6e40dbada7.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/lsba + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/ee/74fe820e114ba618c42e6b5a3e7a6e40dbada7.debug debian/cmtk/usr/lib/cmtk/bin/lsba + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/destripe debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/bc/d98a5af1b05a5ac47e1c68ba7052149a68add0.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/bc/d98a5af1b05a5ac47e1c68ba7052149a68add0.debug + chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/bc/d98a5af1b05a5ac47e1c68ba7052149a68add0.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/destripe + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/bc/d98a5af1b05a5ac47e1c68ba7052149a68add0.debug debian/cmtk/usr/lib/cmtk/bin/destripe + install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/87 + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/levelset debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/87/ab120a766e3f1748b14fd343e493504d5e5265.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/87/ab120a766e3f1748b14fd343e493504d5e5265.debug + chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/87/ab120a766e3f1748b14fd343e493504d5e5265.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/levelset + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/87/ab120a766e3f1748b14fd343e493504d5e5265.debug debian/cmtk/usr/lib/cmtk/bin/levelset install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/0b objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/sbai debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/0b/65b8888bf19fbb72f4dbcbcafeb4289373724a.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/0b/65b8888bf19fbb72f4dbcbcafeb4289373724a.debug chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/0b/65b8888bf19fbb72f4dbcbcafeb4289373724a.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/sbai objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/0b/65b8888bf19fbb72f4dbcbcafeb4289373724a.debug debian/cmtk/usr/lib/cmtk/bin/sbai - install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/73 - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/epiunwarp debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/73/3e61dc8eb8ded74870c07cdf79b0ffef14eb63.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/73/3e61dc8eb8ded74870c07cdf79b0ffef14eb63.debug - chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/73/3e61dc8eb8ded74870c07cdf79b0ffef14eb63.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/epiunwarp - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/73/3e61dc8eb8ded74870c07cdf79b0ffef14eb63.debug debian/cmtk/usr/lib/cmtk/bin/epiunwarp + install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/4b + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/sba debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/4b/ee2aeb5412320a235bf10c6be533843a19c6ba.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/4b/ee2aeb5412320a235bf10c6be533843a19c6ba.debug + chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/4b/ee2aeb5412320a235bf10c6be533843a19c6ba.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/sba + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/4b/ee2aeb5412320a235bf10c6be533843a19c6ba.debug debian/cmtk/usr/lib/cmtk/bin/sba + install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/3c + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/detect_adni_phantom debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/3c/133cd3102a4bf617a038999602e63cafbd883a.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/3c/133cd3102a4bf617a038999602e63cafbd883a.debug + chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/3c/133cd3102a4bf617a038999602e63cafbd883a.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/detect_adni_phantom + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/3c/133cd3102a4bf617a038999602e63cafbd883a.debug debian/cmtk/usr/lib/cmtk/bin/detect_adni_phantom + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/probe debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/8a/f715df87491dc5acaa17aaca05daa77aaced58.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/8a/f715df87491dc5acaa17aaca05daa77aaced58.debug + chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/8a/f715df87491dc5acaa17aaca05daa77aaced58.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/probe + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/8a/f715df87491dc5acaa17aaca05daa77aaced58.debug debian/cmtk/usr/lib/cmtk/bin/probe + install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/1d + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/volume_reconstruction debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/1d/046cb740aae299e5f316d5a72c06e31412a856.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/1d/046cb740aae299e5f316d5a72c06e31412a856.debug + chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/1d/046cb740aae299e5f316d5a72c06e31412a856.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/volume_reconstruction + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/1d/046cb740aae299e5f316d5a72c06e31412a856.debug debian/cmtk/usr/lib/cmtk/bin/volume_reconstruction + install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/1a + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/jidb debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/1a/a3b3d20054552a9c1326ac4edcf97716822d23.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/1a/a3b3d20054552a9c1326ac4edcf97716822d23.debug + chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/1a/a3b3d20054552a9c1326ac4edcf97716822d23.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/jidb + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/1a/a3b3d20054552a9c1326ac4edcf97716822d23.debug debian/cmtk/usr/lib/cmtk/bin/jidb + install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/5b + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/warp2ps debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/5b/0d3282fb179d65bb6990c2d8435f804998e048.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/5b/0d3282fb179d65bb6990c2d8435f804998e048.debug + chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/5b/0d3282fb179d65bb6990c2d8435f804998e048.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/warp2ps + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/5b/0d3282fb179d65bb6990c2d8435f804998e048.debug debian/cmtk/usr/lib/cmtk/bin/warp2ps + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/statistics debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/46/7c051ed625f71b69bb2933fb0cbc531d3dd998.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/46/7c051ed625f71b69bb2933fb0cbc531d3dd998.debug + chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/46/7c051ed625f71b69bb2933fb0cbc531d3dd998.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/statistics + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/46/7c051ed625f71b69bb2933fb0cbc531d3dd998.debug debian/cmtk/usr/lib/cmtk/bin/statistics + install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/22 + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/mrbias debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/22/491e0b2b95a4cde6ad7ce73364a778ee03dddb.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/22/491e0b2b95a4cde6ad7ce73364a778ee03dddb.debug + chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/22/491e0b2b95a4cde6ad7ce73364a778ee03dddb.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/mrbias + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/22/491e0b2b95a4cde6ad7ce73364a778ee03dddb.debug debian/cmtk/usr/lib/cmtk/bin/mrbias + install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/bb + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/registration debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/bb/23040ecd9f9198d32490d53d68db8c007dbdae.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/bb/23040ecd9f9198d32490d53d68db8c007dbdae.debug + chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/bb/23040ecd9f9198d32490d53d68db8c007dbdae.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/registration + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/bb/23040ecd9f9198d32490d53d68db8c007dbdae.debug debian/cmtk/usr/lib/cmtk/bin/registration + install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/b8 + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/warp debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/b8/00d370e7989957e8366824e41ad1a224beb365.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/b8/00d370e7989957e8366824e41ad1a224beb365.debug + chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/b8/00d370e7989957e8366824e41ad1a224beb365.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/warp + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/b8/00d370e7989957e8366824e41ad1a224beb365.debug debian/cmtk/usr/lib/cmtk/bin/warp + install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/81 + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/mk_adni_phantom debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/81/395d15a1db4685efee32b9470abc0cec2a2c11.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/81/395d15a1db4685efee32b9470abc0cec2a2c11.debug + chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/81/395d15a1db4685efee32b9470abc0cec2a2c11.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/mk_adni_phantom + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/81/395d15a1db4685efee32b9470abc0cec2a2c11.debug debian/cmtk/usr/lib/cmtk/bin/mk_adni_phantom + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/convertx debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/2b/b3d40bc1b5b47859780106e208bf4e8070edb8.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/2b/b3d40bc1b5b47859780106e208bf4e8070edb8.debug + chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/2b/b3d40bc1b5b47859780106e208bf4e8070edb8.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/convertx + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/2b/b3d40bc1b5b47859780106e208bf4e8070edb8.debug debian/cmtk/usr/lib/cmtk/bin/convertx + install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/5c + objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/lmsba debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/5c/06664c383b45abd17e1e78a065d754a96df24a.debug + chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/5c/06664c383b45abd17e1e78a065d754a96df24a.debug + chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/5c/06664c383b45abd17e1e78a065d754a96df24a.debug + strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/lmsba + objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/5c/06664c383b45abd17e1e78a065d754a96df24a.debug debian/cmtk/usr/lib/cmtk/bin/lmsba install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/7d objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/filter debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/7d/404466589a89bf7690e0144d50f37b48780ee7.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/7d/404466589a89bf7690e0144d50f37b48780ee7.debug chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/7d/404466589a89bf7690e0144d50f37b48780ee7.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/filter objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/7d/404466589a89bf7690e0144d50f37b48780ee7.debug debian/cmtk/usr/lib/cmtk/bin/filter - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/groupwise_init debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/66/4b024ec39073f88ebd95dff16a930cebe77838.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/66/4b024ec39073f88ebd95dff16a930cebe77838.debug - chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/66/4b024ec39073f88ebd95dff16a930cebe77838.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/groupwise_init - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/66/4b024ec39073f88ebd95dff16a930cebe77838.debug debian/cmtk/usr/lib/cmtk/bin/groupwise_init - install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/84 - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/fib2image debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/84/2a1fdeb1094f9dbbe15a87ae58f923cb76b359.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/84/2a1fdeb1094f9dbbe15a87ae58f923cb76b359.debug - chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/84/2a1fdeb1094f9dbbe15a87ae58f923cb76b359.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/fib2image - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/84/2a1fdeb1094f9dbbe15a87ae58f923cb76b359.debug debian/cmtk/usr/lib/cmtk/bin/fib2image - install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/ee - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/lsba debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/ee/74fe820e114ba618c42e6b5a3e7a6e40dbada7.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/ee/74fe820e114ba618c42e6b5a3e7a6e40dbada7.debug - chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/ee/74fe820e114ba618c42e6b5a3e7a6e40dbada7.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/lsba - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/ee/74fe820e114ba618c42e6b5a3e7a6e40dbada7.debug debian/cmtk/usr/lib/cmtk/bin/lsba install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f0 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/reorient debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f0/3f1d2790cb091075a3f2c0bcca473bd4fda560.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f0/3f1d2790cb091075a3f2c0bcca473bd4fda560.debug chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f0/3f1d2790cb091075a3f2c0bcca473bd4fda560.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/reorient objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f0/3f1d2790cb091075a3f2c0bcca473bd4fda560.debug debian/cmtk/usr/lib/cmtk/bin/reorient - install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/9c - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/sympl debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/9c/0795e3ed09e83375ee70afb68bd2bcd478d5ab.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/9c/0795e3ed09e83375ee70afb68bd2bcd478d5ab.debug - chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/9c/0795e3ed09e83375ee70afb68bd2bcd478d5ab.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/sympl - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/9c/0795e3ed09e83375ee70afb68bd2bcd478d5ab.debug debian/cmtk/usr/lib/cmtk/bin/sympl - install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/4d - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/convert_warp debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/4d/f7e69d8732ec4df548403dd61ca507c9e21d83.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/4d/f7e69d8732ec4df548403dd61ca507c9e21d83.debug - chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/4d/f7e69d8732ec4df548403dd61ca507c9e21d83.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/convert_warp - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/4d/f7e69d8732ec4df548403dd61ca507c9e21d83.debug debian/cmtk/usr/lib/cmtk/bin/convert_warp - install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/33 - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/describe debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/33/5067af08db50e253d9f38fdcf48cca60c45aa8.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/33/5067af08db50e253d9f38fdcf48cca60c45aa8.debug - chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/33/5067af08db50e253d9f38fdcf48cca60c45aa8.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/describe - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/33/5067af08db50e253d9f38fdcf48cca60c45aa8.debug debian/cmtk/usr/lib/cmtk/bin/describe - install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/bb - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/registration debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/bb/23040ecd9f9198d32490d53d68db8c007dbdae.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/bb/23040ecd9f9198d32490d53d68db8c007dbdae.debug - chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/bb/23040ecd9f9198d32490d53d68db8c007dbdae.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/registration - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/bb/23040ecd9f9198d32490d53d68db8c007dbdae.debug debian/cmtk/usr/lib/cmtk/bin/registration - install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/1b - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/dwi_mask_bad_slices debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/1b/e2b935f48b14b8234493aaa1ca81fb16c17415.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/1b/e2b935f48b14b8234493aaa1ca81fb16c17415.debug - chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/1b/e2b935f48b14b8234493aaa1ca81fb16c17415.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/dwi_mask_bad_slices - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/1b/e2b935f48b14b8234493aaa1ca81fb16c17415.debug debian/cmtk/usr/lib/cmtk/bin/dwi_mask_bad_slices - install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/5b - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/warp2ps debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/5b/0d3282fb179d65bb6990c2d8435f804998e048.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/5b/0d3282fb179d65bb6990c2d8435f804998e048.debug - chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/5b/0d3282fb179d65bb6990c2d8435f804998e048.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/warp2ps - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/5b/0d3282fb179d65bb6990c2d8435f804998e048.debug debian/cmtk/usr/lib/cmtk/bin/warp2ps - install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/fb - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/mk_phantom_3d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/fb/24428a6e8d0354abf51d2626bf31906d0740e1.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/fb/24428a6e8d0354abf51d2626bf31906d0740e1.debug - chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/fb/24428a6e8d0354abf51d2626bf31906d0740e1.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/mk_phantom_3d - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/fb/24428a6e8d0354abf51d2626bf31906d0740e1.debug debian/cmtk/usr/lib/cmtk/bin/mk_phantom_3d install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/5d objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/mcwarp debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/5d/86ab39187f4ada594a5f9ebad5bf671a6132f3.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/5d/86ab39187f4ada594a5f9ebad5bf671a6132f3.debug chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/5d/86ab39187f4ada594a5f9ebad5bf671a6132f3.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/mcwarp objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/5d/86ab39187f4ada594a5f9ebad5bf671a6132f3.debug debian/cmtk/usr/lib/cmtk/bin/mcwarp - install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/c4 - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/regress debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/c4/cb18be71b6a9b600f1758c8f8d0d6750a4651c.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/c4/cb18be71b6a9b600f1758c8f8d0d6750a4651c.debug - chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/c4/cb18be71b6a9b600f1758c8f8d0d6750a4651c.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/regress - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/c4/cb18be71b6a9b600f1758c8f8d0d6750a4651c.debug debian/cmtk/usr/lib/cmtk/bin/regress - install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/1d - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/volume_reconstruction debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/1d/046cb740aae299e5f316d5a72c06e31412a856.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/1d/046cb740aae299e5f316d5a72c06e31412a856.debug - chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/1d/046cb740aae299e5f316d5a72c06e31412a856.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/volume_reconstruction - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/1d/046cb740aae299e5f316d5a72c06e31412a856.debug debian/cmtk/usr/lib/cmtk/bin/volume_reconstruction - install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/4b - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/sba debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/4b/ee2aeb5412320a235bf10c6be533843a19c6ba.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/4b/ee2aeb5412320a235bf10c6be533843a19c6ba.debug - chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/4b/ee2aeb5412320a235bf10c6be533843a19c6ba.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/sba - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/4b/ee2aeb5412320a235bf10c6be533843a19c6ba.debug debian/cmtk/usr/lib/cmtk/bin/sba - install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/5c - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/lmsba debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/5c/06664c383b45abd17e1e78a065d754a96df24a.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/5c/06664c383b45abd17e1e78a065d754a96df24a.debug - chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/5c/06664c383b45abd17e1e78a065d754a96df24a.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/lmsba - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/5c/06664c383b45abd17e1e78a065d754a96df24a.debug debian/cmtk/usr/lib/cmtk/bin/lmsba - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/statistics debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/46/7c051ed625f71b69bb2933fb0cbc531d3dd998.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/46/7c051ed625f71b69bb2933fb0cbc531d3dd998.debug - chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/46/7c051ed625f71b69bb2933fb0cbc531d3dd998.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/statistics - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/46/7c051ed625f71b69bb2933fb0cbc531d3dd998.debug debian/cmtk/usr/lib/cmtk/bin/statistics - install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/65 - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/ttest debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/65/082176ed4d3d3f49ad9d8a2a8a342269824675.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/65/082176ed4d3d3f49ad9d8a2a8a342269824675.debug - chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/65/082176ed4d3d3f49ad9d8a2a8a342269824675.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/ttest - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/65/082176ed4d3d3f49ad9d8a2a8a342269824675.debug debian/cmtk/usr/lib/cmtk/bin/ttest - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/mk_nifti_hdr debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/2d/92987e9f2c949d3beb3d883e2f53eedd8a7dd9.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/2d/92987e9f2c949d3beb3d883e2f53eedd8a7dd9.debug - chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/2d/92987e9f2c949d3beb3d883e2f53eedd8a7dd9.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/mk_nifti_hdr - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/2d/92987e9f2c949d3beb3d883e2f53eedd8a7dd9.debug debian/cmtk/usr/lib/cmtk/bin/mk_nifti_hdr - install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/87 - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/levelset debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/87/ab120a766e3f1748b14fd343e493504d5e5265.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/87/ab120a766e3f1748b14fd343e493504d5e5265.debug - chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/87/ab120a766e3f1748b14fd343e493504d5e5265.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/levelset - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/87/ab120a766e3f1748b14fd343e493504d5e5265.debug debian/cmtk/usr/lib/cmtk/bin/levelset - install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/91 - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/similarity debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/91/563380e92589318013ddd5c2fe902127d21833.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/91/563380e92589318013ddd5c2fe902127d21833.debug - chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/91/563380e92589318013ddd5c2fe902127d21833.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/similarity - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/91/563380e92589318013ddd5c2fe902127d21833.debug debian/cmtk/usr/lib/cmtk/bin/similarity - install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/60 - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/dbtool debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/60/77c5340d8b24e6ec13e407324cdd2827510a7e.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/60/77c5340d8b24e6ec13e407324cdd2827510a7e.debug - chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/60/77c5340d8b24e6ec13e407324cdd2827510a7e.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/dbtool - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/60/77c5340d8b24e6ec13e407324cdd2827510a7e.debug debian/cmtk/usr/lib/cmtk/bin/dbtool - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/groupwise_warp debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/bc/42669b2ea61f3e402727920ad8e2fbffbeaa31.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/bc/42669b2ea61f3e402727920ad8e2fbffbeaa31.debug - chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/bc/42669b2ea61f3e402727920ad8e2fbffbeaa31.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/groupwise_warp - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/bc/42669b2ea61f3e402727920ad8e2fbffbeaa31.debug debian/cmtk/usr/lib/cmtk/bin/groupwise_warp - install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/8e - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/vtkxform debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/8e/fa22f553cc0c84da8202e58f08420bcc5e3e74.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/8e/fa22f553cc0c84da8202e58f08420bcc5e3e74.debug - chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/8e/fa22f553cc0c84da8202e58f08420bcc5e3e74.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/vtkxform - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/8e/fa22f553cc0c84da8202e58f08420bcc5e3e74.debug debian/cmtk/usr/lib/cmtk/bin/vtkxform - install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/a0 - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/fit_affine_xform_landmarks debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/a0/2d98b700fa9d568c7caf1a3e4a8553e552386e.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/a0/2d98b700fa9d568c7caf1a3e4a8553e552386e.debug - chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/a0/2d98b700fa9d568c7caf1a3e4a8553e552386e.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/fit_affine_xform_landmarks - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/a0/2d98b700fa9d568c7caf1a3e4a8553e552386e.debug debian/cmtk/usr/lib/cmtk/bin/fit_affine_xform_landmarks - install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/da - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/fit_affine_xform debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/da/e8d3af7cc90db2bc88b16c7b0d8c75ca51ef1d.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/da/e8d3af7cc90db2bc88b16c7b0d8c75ca51ef1d.debug - chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/da/e8d3af7cc90db2bc88b16c7b0d8c75ca51ef1d.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/fit_affine_xform - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/da/e8d3af7cc90db2bc88b16c7b0d8c75ca51ef1d.debug debian/cmtk/usr/lib/cmtk/bin/fit_affine_xform - install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/17 - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/mcaffine debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/17/5fd5b96fd6ded3098767f0a1d4a7ded34864e8.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/17/5fd5b96fd6ded3098767f0a1d4a7ded34864e8.debug - chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/17/5fd5b96fd6ded3098767f0a1d4a7ded34864e8.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/mcaffine - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/17/5fd5b96fd6ded3098767f0a1d4a7ded34864e8.debug debian/cmtk/usr/lib/cmtk/bin/mcaffine - install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/b8 - objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/warp debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/b8/00d370e7989957e8366824e41ad1a224beb365.debug - chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/b8/00d370e7989957e8366824e41ad1a224beb365.debug - chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/b8/00d370e7989957e8366824e41ad1a224beb365.debug - strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/warp - objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/b8/00d370e7989957e8366824e41ad1a224beb365.debug debian/cmtk/usr/lib/cmtk/bin/warp install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.dwz cp --reflink=auto -a debian/cmtk/usr/lib/debug/.dwz/i386-linux-gnu debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.dwz rm -fr debian/cmtk/usr/lib/debug/.dwz @@ -6768,7 +6818,9 @@ rm -f debian/cmtk/DEBIAN/shlibs dh_shlibdeps install -d debian/cmtk/DEBIAN - dpkg-shlibdeps -Tdebian/cmtk.substvars debian/cmtk/usr/lib/cmtk/libNrrdIO.so debian/cmtk/usr/lib/cmtk/libcmtkBase.so debian/cmtk/usr/lib/cmtk/libcmtkMxml.so debian/cmtk/usr/lib/cmtk/libcmtkNumerics.so debian/cmtk/usr/lib/cmtk/libcmtkRegistration.so debian/cmtk/usr/lib/cmtk/libcmtkIO.so debian/cmtk/usr/lib/cmtk/libcmtkRecon.so debian/cmtk/usr/lib/cmtk/libcmtkSegmentation.so debian/cmtk/usr/lib/cmtk/libcmtkSystem.so debian/cmtk/usr/lib/cmtk/bin/asegment debian/cmtk/usr/lib/cmtk/bin/mat2dof debian/cmtk/usr/lib/cmtk/bin/concat_affine debian/cmtk/usr/lib/cmtk/bin/xform2scalar debian/cmtk/usr/lib/cmtk/bin/reformatx debian/cmtk/usr/lib/cmtk/bin/lvote debian/cmtk/usr/lib/cmtk/bin/imagemath debian/cmtk/usr/lib/cmtk/bin/overlap debian/cmtk/usr/lib/cmtk/bin/hausdorff debian/cmtk/usr/lib/cmtk/bin/registrationx debian/cmtk/usr/lib/cmtk/bin/detect_adni_phantom debian/cmtk/usr/lib/cmtk/bin/warpx debian/cmtk/usr/lib/cmtk/bin/fit_spline_dfield debian/cmtk/usr/lib/cmtk/bin/pxsearch debian/cmtk/usr/lib/cmtk/bin/film debian/cmtk/usr/lib/cmtk/bin/stream_pixels debian/cmtk/usr/lib/cmtk/bin/destripe debian/cmtk/usr/lib/cmtk/bin/make_initial_affine debian/cmtk/usr/lib/cmtk/bin/asegment_sri24 debian/cmtk/usr/lib/cmtk/bin/detect_spheres_matched_filter debian/cmtk/usr/lib/cmtk/bin/vol2csv debian/cmtk/usr/lib/cmtk/bin/gmm debian/cmtk/usr/lib/cmtk/bin/gregxform debian/cmtk/usr/lib/cmtk/bin/unsplit debian/cmtk/usr/lib/cmtk/bin/jidb debian/cmtk/usr/lib/cmtk/bin/fibxform debian/cmtk/usr/lib/cmtk/bin/xform2dfield debian/cmtk/usr/lib/cmtk/bin/interleaved_bad_slices debian/cmtk/usr/lib/cmtk/bin/sequence debian/cmtk/usr/lib/cmtk/bin/mrbias debian/cmtk/usr/lib/cmtk/bin/average_labels debian/cmtk/usr/lib/cmtk/bin/geomatch debian/cmtk/usr/lib/cmtk/bin/avg_adm debian/cmtk/usr/lib/cmtk/bin/groupwise_affine debian/cmtk/usr/lib/cmtk/bin/mk_adni_phantom debian/cmtk/usr/lib/cmtk/bin/fit_spline_xform debian/cmtk/usr/lib/cmtk/bin/symplx debian/cmtk/usr/lib/cmtk/bin/average_affine debian/cmtk/usr/lib/cmtk/bin/fit_affine_dfield debian/cmtk/usr/lib/cmtk/bin/dof2mat debian/cmtk/usr/lib/cmtk/bin/convertx debian/cmtk/usr/lib/cmtk/bin/split debian/cmtk/usr/lib/cmtk/bin/volume_injection debian/cmtk/usr/lib/cmtk/bin/mk_analyze_hdr debian/cmtk/usr/lib/cmtk/bin/histogram debian/cmtk/usr/lib/cmtk/bin/probe debian/cmtk/usr/lib/cmtk/bin/average_images debian/cmtk/usr/lib/cmtk/bin/glm debian/cmtk/usr/lib/cmtk/bin/streamxform debian/cmtk/usr/lib/cmtk/bin/xform2itk debian/cmtk/usr/lib/cmtk/bin/dcm2image debian/cmtk/usr/lib/cmtk/bin/unwarp_image_phantom debian/cmtk/usr/lib/cmtk/bin/sbai debian/cmtk/usr/lib/cmtk/bin/epiunwarp debian/cmtk/usr/lib/cmtk/bin/filter debian/cmtk/usr/lib/cmtk/bin/groupwise_init debian/cmtk/usr/lib/cmtk/bin/fib2image debian/cmtk/usr/lib/cmtk/bin/lsba debian/cmtk/usr/lib/cmtk/bin/reorient debian/cmtk/usr/lib/cmtk/bin/sympl debian/cmtk/usr/lib/cmtk/bin/convert_warp debian/cmtk/usr/lib/cmtk/bin/describe debian/cmtk/usr/lib/cmtk/bin/registration debian/cmtk/usr/lib/cmtk/bin/dwi_mask_bad_slices debian/cmtk/usr/lib/cmtk/bin/warp2ps debian/cmtk/usr/lib/cmtk/bin/mk_phantom_3d debian/cmtk/usr/lib/cmtk/bin/mcwarp debian/cmtk/usr/lib/cmtk/bin/regress debian/cmtk/usr/lib/cmtk/bin/volume_reconstruction debian/cmtk/usr/lib/cmtk/bin/sba debian/cmtk/usr/lib/cmtk/bin/lmsba debian/cmtk/usr/lib/cmtk/bin/statistics debian/cmtk/usr/lib/cmtk/bin/ttest debian/cmtk/usr/lib/cmtk/bin/mk_nifti_hdr debian/cmtk/usr/lib/cmtk/bin/levelset debian/cmtk/usr/lib/cmtk/bin/similarity debian/cmtk/usr/lib/cmtk/bin/dbtool debian/cmtk/usr/lib/cmtk/bin/groupwise_warp debian/cmtk/usr/lib/cmtk/bin/vtkxform debian/cmtk/usr/lib/cmtk/bin/fit_affine_xform_landmarks debian/cmtk/usr/lib/cmtk/bin/fit_affine_xform debian/cmtk/usr/lib/cmtk/bin/mcaffine debian/cmtk/usr/lib/cmtk/bin/warp + dpkg-shlibdeps -Tdebian/cmtk.substvars debian/cmtk/usr/lib/cmtk/libcmtkIO.so debian/cmtk/usr/lib/cmtk/libcmtkBase.so debian/cmtk/usr/lib/cmtk/libcmtkRecon.so debian/cmtk/usr/lib/cmtk/libNrrdIO.so debian/cmtk/usr/lib/cmtk/libcmtkRegistration.so debian/cmtk/usr/lib/cmtk/libcmtkSegmentation.so debian/cmtk/usr/lib/cmtk/libcmtkSystem.so debian/cmtk/usr/lib/cmtk/libcmtkMxml.so debian/cmtk/usr/lib/cmtk/libcmtkNumerics.so debian/cmtk/usr/lib/cmtk/bin/similarity debian/cmtk/usr/lib/cmtk/bin/sequence debian/cmtk/usr/lib/cmtk/bin/fit_spline_dfield debian/cmtk/usr/lib/cmtk/bin/gregxform debian/cmtk/usr/lib/cmtk/bin/warpx debian/cmtk/usr/lib/cmtk/bin/hausdorff debian/cmtk/usr/lib/cmtk/bin/volume_injection debian/cmtk/usr/lib/cmtk/bin/symplx debian/cmtk/usr/lib/cmtk/bin/vtkxform debian/cmtk/usr/lib/cmtk/bin/mk_phantom_3d debian/cmtk/usr/lib/cmtk/bin/fit_affine_xform debian/cmtk/usr/lib/cmtk/bin/mat2dof debian/cmtk/usr/lib/cmtk/bin/average_images debian/cmtk/usr/lib/cmtk/bin/stream_pixels debian/cmtk/usr/lib/cmtk/bin/asegment debian/cmtk/usr/lib/cmtk/bin/make_initial_affine debian/cmtk/usr/lib/cmtk/bin/mk_analyze_hdr debian/cmtk/usr/lib/cmtk/bin/fit_affine_xform_landmarks debian/cmtk/usr/lib/cmtk/bin/groupwise_warp debian/cmtk/usr/lib/cmtk/bin/geomatch debian/cmtk/usr/lib/cmtk/bin/mk_nifti_hdr debian/cmtk/usr/lib/cmtk/bin/lvote debian/cmtk/usr/lib/cmtk/bin/unsplit debian/cmtk/usr/lib/cmtk/bin/describe debian/cmtk/usr/lib/cmtk/bin/regress debian/cmtk/usr/lib/cmtk/bin/avg_adm debian/cmtk/usr/lib/cmtk/bin/groupwise_init debian/cmtk/usr/lib/cmtk/bin/asegment_sri24 debian/cmtk/usr/lib/cmtk/bin/dcm2image debian/cmtk/usr/lib/cmtk/bin/mcaffine debian/cmtk/usr/lib/cmtk/bin/sympl debian/cmtk/usr/lib/cmtk/bin/groupwise_affine debian/cmtk/usr/lib/cmtk/bin/xform2scalar debian/cmtk/usr/lib/cmtk/bin/histogram debian/cmtk/usr/lib/cmtk/bin/fib2image debian/cmtk/usr/lib/cmtk/bin/fibxform debian/cmtk/usr/lib/cmtk/bin/imagemath debian/cmtk/usr/lib/cmtk/bin/detect_spheres_matched_filter debian/cmtk/usr/lib/cmtk/bin/interleaved_bad_slices debian/cmtk/usr/lib/cmtk/bin/epiunwarp debian/cmtk/usr/lib/cmtk/bin/registrationx debian/cmtk/usr/lib/cmtk/bin/ttest debian/cmtk/usr/lib/cmtk/bin/fit_affine_dfield debian/cmtk/usr/lib/cmtk/bin/dwi_mask_bad_slices debian/cmtk/usr/lib/cmtk/bin/vol2csv debian/cmtk/usr/lib/cmtk/bin/average_affine debian/cmtk/usr/lib/cmtk/bin/streamxform debian/cmtk/usr/lib/cmtk/bin/dbtool debian/cmtk/usr/lib/cmtk/bin/xform2itk debian/cmtk/usr/lib/cmtk/bin/average_labels debian/cmtk/usr/lib/cmtk/bin/fit_spline_xform debian/cmtk/usr/lib/cmtk/bin/concat_affine debian/cmtk/usr/lib/cmtk/bin/unwarp_image_phantom debian/cmtk/usr/lib/cmtk/bin/pxsearch debian/cmtk/usr/lib/cmtk/bin/dof2mat debian/cmtk/usr/lib/cmtk/bin/xform2dfield debian/cmtk/usr/lib/cmtk/bin/gmm debian/cmtk/usr/lib/cmtk/bin/split debian/cmtk/usr/lib/cmtk/bin/overlap debian/cmtk/usr/lib/cmtk/bin/reformatx debian/cmtk/usr/lib/cmtk/bin/film debian/cmtk/usr/lib/cmtk/bin/convert_warp debian/cmtk/usr/lib/cmtk/bin/glm debian/cmtk/usr/lib/cmtk/bin/lsba debian/cmtk/usr/lib/cmtk/bin/destripe debian/cmtk/usr/lib/cmtk/bin/levelset debian/cmtk/usr/lib/cmtk/bin/sbai debian/cmtk/usr/lib/cmtk/bin/sba debian/cmtk/usr/lib/cmtk/bin/detect_adni_phantom debian/cmtk/usr/lib/cmtk/bin/probe debian/cmtk/usr/lib/cmtk/bin/volume_reconstruction debian/cmtk/usr/lib/cmtk/bin/jidb debian/cmtk/usr/lib/cmtk/bin/warp2ps debian/cmtk/usr/lib/cmtk/bin/statistics debian/cmtk/usr/lib/cmtk/bin/mrbias debian/cmtk/usr/lib/cmtk/bin/registration debian/cmtk/usr/lib/cmtk/bin/warp debian/cmtk/usr/lib/cmtk/bin/mk_adni_phantom debian/cmtk/usr/lib/cmtk/bin/convertx debian/cmtk/usr/lib/cmtk/bin/lmsba debian/cmtk/usr/lib/cmtk/bin/filter debian/cmtk/usr/lib/cmtk/bin/reorient debian/cmtk/usr/lib/cmtk/bin/mcwarp +dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' +dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' @@ -6787,20 +6839,22 @@ dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' -dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' -dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' +dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' +dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' +dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' +dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' -dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' -dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' -dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' -dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' +dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' +dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' +dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' +dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' @@ -6811,10 +6865,10 @@ dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' +dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' +dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' -dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' -dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' @@ -6827,27 +6881,28 @@ dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' +dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRecon.so' +dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRecon.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' +dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' +dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' -dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' -dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' -dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' -dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' -dpkg-shlibdeps: warning: debian/cmtk/usr/lib/cmtk/libNrrdIO.so contains an unresolvable reference to symbol sqrt: it's probably a plugin +dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' +dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' @@ -6858,8 +6913,14 @@ dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' +dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' +dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' +dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' +dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' +dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' +dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' @@ -6888,8 +6949,6 @@ dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' -dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' -dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' @@ -6900,6 +6959,8 @@ dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' +dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' +dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' @@ -6924,22 +6985,14 @@ dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' -dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRecon.so' -dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRecon.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' -dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' -dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' -dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' -dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' -dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' -dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' @@ -6966,6 +7019,10 @@ dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' +dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' +dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' +dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' +dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' @@ -6980,10 +7037,20 @@ dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' -dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' -dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' +dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' +dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' +dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' +dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' +dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' +dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' +dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' +dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' +dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' +dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' +dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' +dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' @@ -7002,34 +7069,32 @@ dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' -dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRecon.so' -dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRecon.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' -dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' -dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' -dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRecon.so' -dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRecon.so' +dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' +dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' -dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' -dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' +dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' +dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' +dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' +dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' @@ -7044,14 +7109,14 @@ dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' +dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' +dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' -dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' -dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' @@ -7060,8 +7125,14 @@ dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' +dpkg-shlibdeps: warning: debian/cmtk/usr/lib/cmtk/libcmtkMxml.so contains an unresolvable reference to symbol pthread_getspecific: it's probably a plugin +dpkg-shlibdeps: warning: 4 other similar warnings have been skipped (use -v to see them all) +dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' +dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' +dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' +dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' @@ -7092,6 +7163,8 @@ dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' +dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' +dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' @@ -7108,8 +7181,6 @@ dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' -dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' -dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' @@ -7126,8 +7197,8 @@ dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' -dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' -dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' +dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' +dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' @@ -7136,18 +7207,18 @@ dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' -dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' -dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' -dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' -dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' +dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRecon.so' +dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRecon.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' +dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' +dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' @@ -7168,8 +7239,6 @@ dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' -dpkg-shlibdeps: warning: debian/cmtk/usr/lib/cmtk/libcmtkMxml.so contains an unresolvable reference to symbol pthread_once: it's probably a plugin -dpkg-shlibdeps: warning: 4 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' @@ -7178,24 +7247,20 @@ dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' +dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRecon.so' +dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRecon.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' -dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' -dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' -dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' -dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' -dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' -dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' -dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' -dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' +dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' +dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' @@ -7204,8 +7269,6 @@ dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' -dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' -dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' @@ -7214,14 +7277,10 @@ dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' -dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' -dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' -dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' -dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' @@ -7234,8 +7293,6 @@ dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' -dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' -dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' @@ -7244,8 +7301,6 @@ dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' -dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' -dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' @@ -7256,6 +7311,8 @@ dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' +dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' +dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' @@ -7264,12 +7321,6 @@ dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' -dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' -dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' -dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' -dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' -dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' -dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' @@ -7278,28 +7329,18 @@ dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' -dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' -dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' -dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' -dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' -dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' -dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' -dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' -dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' -dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' -dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' @@ -7308,8 +7349,6 @@ dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' -dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' -dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' @@ -7322,14 +7361,6 @@ dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' -dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' -dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' -dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' -dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' -dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' -dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' -dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' -dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' @@ -7354,14 +7385,24 @@ dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' +dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' +dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' +dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' +dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' +dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' +dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' +dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' +dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' +dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' +dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' @@ -7374,10 +7415,14 @@ dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' +dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' +dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' +dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' +dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' @@ -7390,24 +7435,22 @@ dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' -dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRecon.so' -dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRecon.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' -dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' -dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' +dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' +dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' +dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' +dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' -dpkg-shlibdeps: warning: can't extract name and version from library name 'libNrrdIO.so' -dpkg-shlibdeps: warning: can't extract name and version from library name 'libNrrdIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' @@ -7436,14 +7479,16 @@ dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' -dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' -dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' +dpkg-shlibdeps: warning: can't extract name and version from library name 'libNrrdIO.so' +dpkg-shlibdeps: warning: can't extract name and version from library name 'libNrrdIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' +dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' +dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' @@ -7460,10 +7505,14 @@ dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' +dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRecon.so' +dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRecon.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' +dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' +dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' @@ -7472,12 +7521,6 @@ dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' -dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' -dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' -dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' -dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' -dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' -dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' @@ -7492,14 +7535,16 @@ dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' -dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' -dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' +dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' +dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' +dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' +dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' @@ -7508,8 +7553,6 @@ dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' -dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' -dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' @@ -7518,8 +7561,15 @@ dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' +dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' +dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' +dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' +dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' +dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' +dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' +dpkg-shlibdeps: warning: debian/cmtk/usr/lib/cmtk/libNrrdIO.so contains an unresolvable reference to symbol sqrt: it's probably a plugin dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' @@ -7528,11 +7578,11 @@ dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' -dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' -dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' -dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/cmtk/usr/lib/cmtk/bin/mk_nifti_hdr debian/cmtk/usr/lib/cmtk/bin/mk_analyze_hdr debian/cmtk/usr/lib/cmtk/bin/sequence debian/cmtk/usr/lib/cmtk/libcmtkBase.so were not linked against libfftw3_threads.so.3 (they use none of the library's symbols) +dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' +dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' +dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/cmtk/usr/lib/cmtk/libcmtkBase.so debian/cmtk/usr/lib/cmtk/bin/sequence debian/cmtk/usr/lib/cmtk/bin/mk_nifti_hdr debian/cmtk/usr/lib/cmtk/bin/mk_analyze_hdr were not linked against libfftw3_threads.so.3 (they use none of the library's symbols) dh_installdeb find debian/cmtk/etc -type f -printf '/etc/%P ' | LC_ALL=C sort >> debian/cmtk/DEBIAN/conffiles @@ -7558,20 +7608,22 @@ dh_builddeb dpkg-deb --build debian/cmtk .. dpkg-deb --build debian/.debhelper/cmtk/dbgsym-root .. -dpkg-deb: building package 'cmtk' in '../cmtk_3.3.1p1+dfsg-2_i386.deb'. dpkg-deb: building package 'cmtk-dbgsym' in '../cmtk-dbgsym_3.3.1p1+dfsg-2_i386.deb'. +dpkg-deb: building package 'cmtk' in '../cmtk_3.3.1p1+dfsg-2_i386.deb'. dpkg-genbuildinfo --build=binary dpkg-genchanges --build=binary >../cmtk_3.3.1p1+dfsg-2_i386.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) I: copying local configuration +I: user script /srv/workspace/pbuilder/703/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/703/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/28914 and its subdirectories -I: Current time: Fri Aug 26 17:35:45 -12 2022 -I: pbuilder-time-stamp: 1661578545 +I: removing directory /srv/workspace/pbuilder/703 and its subdirectories +I: Current time: Sun Jul 25 13:45:38 +14 2021 +I: pbuilder-time-stamp: 1627170338