Diff of the two buildlogs: -- --- b1/build.log 2021-07-29 20:52:28.520921902 +0000 +++ b2/build.log 2021-07-29 21:02:20.362682529 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Thu Jul 29 08:42:01 -12 2021 -I: pbuilder-time-stamp: 1627591321 +I: Current time: Fri Jul 30 10:52:40 +14 2021 +I: pbuilder-time-stamp: 1627591960 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bullseye-reproducible-base.tgz] I: copying local configuration @@ -16,8 +16,8 @@ I: copying [./libminc_2.4.03-3.debian.tar.xz] I: Extracting source gpgv: unknown type of key resource 'trustedkeys.kbx' -gpgv: keyblock resource '/tmp/dpkg-verify-sig.OtWbDNZ9/trustedkeys.kbx': General error -gpgv: Signature made Tue Nov 17 21:56:41 2020 -12 +gpgv: keyblock resource '/tmp/dpkg-verify-sig.sE4NgrS6/trustedkeys.kbx': General error +gpgv: Signature made Wed Nov 18 23:56:41 2020 +14 gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key @@ -34,135 +34,169 @@ dpkg-source: info: applying disable-dimension-test.patch I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/22954/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/18129/tmp/hooks/D01_modify_environment starting +debug: Running on virt32a. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +Removing 'diversion of /bin/sh to /bin/sh.distrib by dash' +Adding 'diversion of /bin/sh to /bin/sh.distrib by bash' +Removing 'diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by dash' +Adding 'diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by bash' +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/18129/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/18129/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='armhf' - DEBIAN_FRONTEND='noninteractive' - DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all,-fixfilepath parallel=5' - DISTRIBUTION='' - HOME='/root' - HOST_ARCH='armhf' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:hostcomplete:interactive_comments:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="1" [2]="4" [3]="1" [4]="release" [5]="arm-unknown-linux-gnueabihf") + BASH_VERSION='5.1.4(1)-release' + BUILDDIR=/build + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=armhf + DEBIAN_FRONTEND=noninteractive + DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all,-fixfilepath parallel=4' + DIRSTACK=() + DISTRIBUTION= + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=arm + HOST_ARCH=armhf IFS=' ' - INVOCATION_ID='9ef642e3481743fabda788e65e3cb5c5' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='22954' - PS1='# ' - PS2='> ' + INVOCATION_ID=746b26eedeb941eba193351e63efed99 + LANG=C + LANGUAGE=it_CH:it + LC_ALL=C + MACHTYPE=arm-unknown-linux-gnueabihf + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnueabihf + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=18129 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/tmp.SenHg2NSAL/pbuilderrc_TLMF --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bullseye-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/tmp.SenHg2NSAL/b1 --logfile b1/build.log libminc_2.4.03-3.dsc' - SUDO_GID='114' - SUDO_UID='109' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://10.0.0.15:8000/' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/tmp.SenHg2NSAL/pbuilderrc_g9EI --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bullseye-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/tmp.SenHg2NSAL/b2 --logfile b2/build.log --extrapackages usrmerge libminc_2.4.03-3.dsc' + SUDO_GID=113 + SUDO_UID=107 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://10.0.0.15:8000/ I: uname -a - Linux ff64a 5.10.0-8-arm64 #1 SMP Debian 5.10.46-2 (2021-07-20) aarch64 GNU/Linux + Linux i-capture-the-hostname 5.10.0-8-armmp-lpae #1 SMP Debian 5.10.46-2 (2021-07-20) armv7l GNU/Linux I: ls -l /bin total 3580 - -rwxr-xr-x 1 root root 816764 Jun 21 14:26 bash - -rwxr-xr-x 3 root root 26052 Jul 20 2020 bunzip2 - -rwxr-xr-x 3 root root 26052 Jul 20 2020 bzcat - lrwxrwxrwx 1 root root 6 Jul 20 2020 bzcmp -> bzdiff - -rwxr-xr-x 1 root root 2225 Jul 20 2020 bzdiff - lrwxrwxrwx 1 root root 6 Jul 20 2020 bzegrep -> bzgrep - -rwxr-xr-x 1 root root 4877 Sep 4 2019 bzexe - lrwxrwxrwx 1 root root 6 Jul 20 2020 bzfgrep -> bzgrep - -rwxr-xr-x 1 root root 3775 Jul 20 2020 bzgrep - -rwxr-xr-x 3 root root 26052 Jul 20 2020 bzip2 - -rwxr-xr-x 1 root root 9636 Jul 20 2020 bzip2recover - lrwxrwxrwx 1 root root 6 Jul 20 2020 bzless -> bzmore - -rwxr-xr-x 1 root root 1297 Jul 20 2020 bzmore - -rwxr-xr-x 1 root root 26668 Sep 22 2020 cat - -rwxr-xr-x 1 root root 43104 Sep 22 2020 chgrp - -rwxr-xr-x 1 root root 38984 Sep 22 2020 chmod - -rwxr-xr-x 1 root root 43112 Sep 22 2020 chown - -rwxr-xr-x 1 root root 92616 Sep 22 2020 cp - -rwxr-xr-x 1 root root 75524 Dec 10 2020 dash - -rwxr-xr-x 1 root root 75880 Sep 22 2020 date - -rwxr-xr-x 1 root root 55436 Sep 22 2020 dd - -rwxr-xr-x 1 root root 59912 Sep 22 2020 df - -rwxr-xr-x 1 root root 96764 Sep 22 2020 dir - -rwxr-xr-x 1 root root 55012 Feb 7 02:38 dmesg - lrwxrwxrwx 1 root root 8 Nov 6 2019 dnsdomainname -> hostname - lrwxrwxrwx 1 root root 8 Nov 6 2019 domainname -> hostname - -rwxr-xr-x 1 root root 22508 Sep 22 2020 echo - -rwxr-xr-x 1 root root 28 Nov 9 2020 egrep - -rwxr-xr-x 1 root root 22496 Sep 22 2020 false - -rwxr-xr-x 1 root root 28 Nov 9 2020 fgrep - -rwxr-xr-x 1 root root 47492 Feb 7 02:38 findmnt - -rwsr-xr-x 1 root root 26076 Feb 26 04:12 fusermount - -rwxr-xr-x 1 root root 124508 Nov 9 2020 grep - -rwxr-xr-x 2 root root 2346 Mar 2 11:30 gunzip - -rwxr-xr-x 1 root root 6376 Mar 2 11:30 gzexe - -rwxr-xr-x 1 root root 64212 Mar 2 11:30 gzip - -rwxr-xr-x 1 root root 13784 Nov 6 2019 hostname - -rwxr-xr-x 1 root root 43180 Sep 22 2020 ln - -rwxr-xr-x 1 root root 35068 Feb 7 2020 login - -rwxr-xr-x 1 root root 96764 Sep 22 2020 ls - -rwxr-xr-x 1 root root 99940 Feb 7 02:38 lsblk - -rwxr-xr-x 1 root root 51408 Sep 22 2020 mkdir - -rwxr-xr-x 1 root root 43184 Sep 22 2020 mknod - -rwxr-xr-x 1 root root 30780 Sep 22 2020 mktemp - -rwxr-xr-x 1 root root 34408 Feb 7 02:38 more - -rwsr-xr-x 1 root root 34400 Feb 7 02:38 mount - -rwxr-xr-x 1 root root 9824 Feb 7 02:38 mountpoint - -rwxr-xr-x 1 root root 88524 Sep 22 2020 mv - lrwxrwxrwx 1 root root 8 Nov 6 2019 nisdomainname -> hostname - lrwxrwxrwx 1 root root 14 Apr 18 03:38 pidof -> /sbin/killall5 - -rwxr-xr-x 1 root root 26652 Sep 22 2020 pwd - lrwxrwxrwx 1 root root 4 Jun 21 14:26 rbash -> bash - -rwxr-xr-x 1 root root 30740 Sep 22 2020 readlink - -rwxr-xr-x 1 root root 43104 Sep 22 2020 rm - -rwxr-xr-x 1 root root 30732 Sep 22 2020 rmdir - -rwxr-xr-x 1 root root 14144 Sep 27 2020 run-parts - -rwxr-xr-x 1 root root 76012 Dec 22 2018 sed - lrwxrwxrwx 1 root root 4 Jul 27 21:27 sh -> dash - -rwxr-xr-x 1 root root 22532 Sep 22 2020 sleep - -rwxr-xr-x 1 root root 55360 Sep 22 2020 stty - -rwsr-xr-x 1 root root 46704 Feb 7 02:38 su - -rwxr-xr-x 1 root root 22532 Sep 22 2020 sync - -rwxr-xr-x 1 root root 340872 Feb 16 21:55 tar - -rwxr-xr-x 1 root root 9808 Sep 27 2020 tempfile - -rwxr-xr-x 1 root root 67696 Sep 22 2020 touch - -rwxr-xr-x 1 root root 22496 Sep 22 2020 true - -rwxr-xr-x 1 root root 9636 Feb 26 04:12 ulockmgr_server - -rwsr-xr-x 1 root root 22108 Feb 7 02:38 umount - -rwxr-xr-x 1 root root 22520 Sep 22 2020 uname - -rwxr-xr-x 2 root root 2346 Mar 2 11:30 uncompress - -rwxr-xr-x 1 root root 96764 Sep 22 2020 vdir - -rwxr-xr-x 1 root root 38512 Feb 7 02:38 wdctl - lrwxrwxrwx 1 root root 8 Nov 6 2019 ypdomainname -> hostname - -rwxr-xr-x 1 root root 1984 Mar 2 11:30 zcat - -rwxr-xr-x 1 root root 1678 Mar 2 11:30 zcmp - -rwxr-xr-x 1 root root 5880 Mar 2 11:30 zdiff - -rwxr-xr-x 1 root root 29 Mar 2 11:30 zegrep - -rwxr-xr-x 1 root root 29 Mar 2 11:30 zfgrep - -rwxr-xr-x 1 root root 2081 Mar 2 11:30 zforce - -rwxr-xr-x 1 root root 7585 Mar 2 11:30 zgrep - -rwxr-xr-x 1 root root 2206 Mar 2 11:30 zless - -rwxr-xr-x 1 root root 1842 Mar 2 11:30 zmore - -rwxr-xr-x 1 root root 4553 Mar 2 11:30 znew -I: user script /srv/workspace/pbuilder/22954/tmp/hooks/D02_print_environment finished + -rwxr-xr-x 1 root root 816764 Jun 22 16:26 bash + -rwxr-xr-x 3 root root 26052 Jul 21 2020 bunzip2 + -rwxr-xr-x 3 root root 26052 Jul 21 2020 bzcat + lrwxrwxrwx 1 root root 6 Jul 21 2020 bzcmp -> bzdiff + -rwxr-xr-x 1 root root 2225 Jul 21 2020 bzdiff + lrwxrwxrwx 1 root root 6 Jul 21 2020 bzegrep -> bzgrep + -rwxr-xr-x 1 root root 4877 Sep 5 2019 bzexe + lrwxrwxrwx 1 root root 6 Jul 21 2020 bzfgrep -> bzgrep + -rwxr-xr-x 1 root root 3775 Jul 21 2020 bzgrep + -rwxr-xr-x 3 root root 26052 Jul 21 2020 bzip2 + -rwxr-xr-x 1 root root 9636 Jul 21 2020 bzip2recover + lrwxrwxrwx 1 root root 6 Jul 21 2020 bzless -> bzmore + -rwxr-xr-x 1 root root 1297 Jul 21 2020 bzmore + -rwxr-xr-x 1 root root 26668 Sep 23 2020 cat + -rwxr-xr-x 1 root root 43104 Sep 23 2020 chgrp + -rwxr-xr-x 1 root root 38984 Sep 23 2020 chmod + -rwxr-xr-x 1 root root 43112 Sep 23 2020 chown + -rwxr-xr-x 1 root root 92616 Sep 23 2020 cp + -rwxr-xr-x 1 root root 75524 Dec 11 2020 dash + -rwxr-xr-x 1 root root 75880 Sep 23 2020 date + -rwxr-xr-x 1 root root 55436 Sep 23 2020 dd + -rwxr-xr-x 1 root root 59912 Sep 23 2020 df + -rwxr-xr-x 1 root root 96764 Sep 23 2020 dir + -rwxr-xr-x 1 root root 55012 Feb 8 04:38 dmesg + lrwxrwxrwx 1 root root 8 Nov 8 2019 dnsdomainname -> hostname + lrwxrwxrwx 1 root root 8 Nov 8 2019 domainname -> hostname + -rwxr-xr-x 1 root root 22508 Sep 23 2020 echo + -rwxr-xr-x 1 root root 28 Nov 10 2020 egrep + -rwxr-xr-x 1 root root 22496 Sep 23 2020 false + -rwxr-xr-x 1 root root 28 Nov 10 2020 fgrep + -rwxr-xr-x 1 root root 47492 Feb 8 04:38 findmnt + -rwsr-xr-x 1 root root 26076 Feb 27 06:12 fusermount + -rwxr-xr-x 1 root root 124508 Nov 10 2020 grep + -rwxr-xr-x 2 root root 2346 Mar 3 13:30 gunzip + -rwxr-xr-x 1 root root 6376 Mar 3 13:30 gzexe + -rwxr-xr-x 1 root root 64212 Mar 3 13:30 gzip + -rwxr-xr-x 1 root root 13784 Nov 8 2019 hostname + -rwxr-xr-x 1 root root 43180 Sep 23 2020 ln + -rwxr-xr-x 1 root root 35068 Feb 8 2020 login + -rwxr-xr-x 1 root root 96764 Sep 23 2020 ls + -rwxr-xr-x 1 root root 99940 Feb 8 04:38 lsblk + -rwxr-xr-x 1 root root 51408 Sep 23 2020 mkdir + -rwxr-xr-x 1 root root 43184 Sep 23 2020 mknod + -rwxr-xr-x 1 root root 30780 Sep 23 2020 mktemp + -rwxr-xr-x 1 root root 34408 Feb 8 04:38 more + -rwsr-xr-x 1 root root 34400 Feb 8 04:38 mount + -rwxr-xr-x 1 root root 9824 Feb 8 04:38 mountpoint + -rwxr-xr-x 1 root root 88524 Sep 23 2020 mv + lrwxrwxrwx 1 root root 8 Nov 8 2019 nisdomainname -> hostname + lrwxrwxrwx 1 root root 14 Apr 19 05:38 pidof -> /sbin/killall5 + -rwxr-xr-x 1 root root 26652 Sep 23 2020 pwd + lrwxrwxrwx 1 root root 4 Jun 22 16:26 rbash -> bash + -rwxr-xr-x 1 root root 30740 Sep 23 2020 readlink + -rwxr-xr-x 1 root root 43104 Sep 23 2020 rm + -rwxr-xr-x 1 root root 30732 Sep 23 2020 rmdir + -rwxr-xr-x 1 root root 14144 Sep 28 2020 run-parts + -rwxr-xr-x 1 root root 76012 Dec 23 2018 sed + lrwxrwxrwx 1 root root 4 Jul 30 10:53 sh -> bash + lrwxrwxrwx 1 root root 4 Jul 26 23:24 sh.distrib -> dash + -rwxr-xr-x 1 root root 22532 Sep 23 2020 sleep + -rwxr-xr-x 1 root root 55360 Sep 23 2020 stty + -rwsr-xr-x 1 root root 46704 Feb 8 04:38 su + -rwxr-xr-x 1 root root 22532 Sep 23 2020 sync + -rwxr-xr-x 1 root root 340872 Feb 17 23:55 tar + -rwxr-xr-x 1 root root 9808 Sep 28 2020 tempfile + -rwxr-xr-x 1 root root 67696 Sep 23 2020 touch + -rwxr-xr-x 1 root root 22496 Sep 23 2020 true + -rwxr-xr-x 1 root root 9636 Feb 27 06:12 ulockmgr_server + -rwsr-xr-x 1 root root 22108 Feb 8 04:38 umount + -rwxr-xr-x 1 root root 22520 Sep 23 2020 uname + -rwxr-xr-x 2 root root 2346 Mar 3 13:30 uncompress + -rwxr-xr-x 1 root root 96764 Sep 23 2020 vdir + -rwxr-xr-x 1 root root 38512 Feb 8 04:38 wdctl + lrwxrwxrwx 1 root root 8 Nov 8 2019 ypdomainname -> hostname + -rwxr-xr-x 1 root root 1984 Mar 3 13:30 zcat + -rwxr-xr-x 1 root root 1678 Mar 3 13:30 zcmp + -rwxr-xr-x 1 root root 5880 Mar 3 13:30 zdiff + -rwxr-xr-x 1 root root 29 Mar 3 13:30 zegrep + -rwxr-xr-x 1 root root 29 Mar 3 13:30 zfgrep + -rwxr-xr-x 1 root root 2081 Mar 3 13:30 zforce + -rwxr-xr-x 1 root root 7585 Mar 3 13:30 zgrep + -rwxr-xr-x 1 root root 2206 Mar 3 13:30 zless + -rwxr-xr-x 1 root root 1842 Mar 3 13:30 zmore + -rwxr-xr-x 1 root root 4553 Mar 3 13:30 znew +I: user script /srv/workspace/pbuilder/18129/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -290,7 +324,7 @@ Get: 78 http://deb.debian.org/debian bullseye/main armhf libznz-dev armhf 3.0.1-8 [13.9 kB] Get: 79 http://deb.debian.org/debian bullseye/main armhf libnifti2-dev armhf 3.0.1-8 [97.3 kB] Get: 80 http://deb.debian.org/debian bullseye/main armhf libnifti-dev all 3.0.1-8 [12.7 kB] -Fetched 32.1 MB in 10s (3366 kB/s) +Fetched 32.1 MB in 4s (7854 kB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package bsdextrautils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19398 files and directories currently installed.) @@ -626,8 +660,45 @@ Writing extended state information... Building tag database... -> Finished parsing the build-deps +Reading package lists... +Building dependency tree... +Reading state information... +The following additional packages will be installed: + libfile-find-rule-perl libnumber-compare-perl libtext-glob-perl +The following NEW packages will be installed: + libfile-find-rule-perl libnumber-compare-perl libtext-glob-perl usrmerge +0 upgraded, 4 newly installed, 0 to remove and 0 not upgraded. +Need to get 59.5 kB of archives. +After this operation, 157 kB of additional disk space will be used. +Get:1 http://deb.debian.org/debian bullseye/main armhf libnumber-compare-perl all 0.03-1.1 [6956 B] +Get:2 http://deb.debian.org/debian bullseye/main armhf libtext-glob-perl all 0.11-1 [8888 B] +Get:3 http://deb.debian.org/debian bullseye/main armhf libfile-find-rule-perl all 0.34-1 [30.6 kB] +Get:4 http://deb.debian.org/debian bullseye/main armhf usrmerge all 25 [13.0 kB] +debconf: delaying package configuration, since apt-utils is not installed +Fetched 59.5 kB in 0s (685 kB/s) +Selecting previously unselected package libnumber-compare-perl. +(Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 24867 files and directories currently installed.) +Preparing to unpack .../libnumber-compare-perl_0.03-1.1_all.deb ... +Unpacking libnumber-compare-perl (0.03-1.1) ... +Selecting previously unselected package libtext-glob-perl. +Preparing to unpack .../libtext-glob-perl_0.11-1_all.deb ... +Unpacking libtext-glob-perl (0.11-1) ... +Selecting previously unselected package libfile-find-rule-perl. +Preparing to unpack .../libfile-find-rule-perl_0.34-1_all.deb ... +Unpacking libfile-find-rule-perl (0.34-1) ... +Selecting previously unselected package usrmerge. +Preparing to unpack .../archives/usrmerge_25_all.deb ... +Unpacking usrmerge (25) ... +Setting up libtext-glob-perl (0.11-1) ... +Setting up libnumber-compare-perl (0.03-1.1) ... +Setting up libfile-find-rule-perl (0.34-1) ... +Setting up usrmerge (25) ... +The system has been successfully converted. +Processing triggers for man-db (2.9.4-2) ... +Not building database; man-db/auto-update is not 'true'. I: Building the package -I: Running cd /build/libminc-2.4.03/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../libminc_2.4.03-3_source.changes +hostname: Name or service not known +I: Running cd /build/libminc-2.4.03/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../libminc_2.4.03-3_source.changes dpkg-buildpackage: info: source package libminc dpkg-buildpackage: info: source version 2.4.03-3 dpkg-buildpackage: info: source distribution unstable @@ -761,7 +832,7 @@ -- Build files have been written to: /build/libminc-2.4.03/obj-arm-linux-gnueabihf make[1]: Leaving directory '/build/libminc-2.4.03' dh_auto_build - cd obj-arm-linux-gnueabihf && make -j5 "INSTALL=install --strip-program=true" VERBOSE=1 + cd obj-arm-linux-gnueabihf && make -j4 "INSTALL=install --strip-program=true" VERBOSE=1 make[1]: Entering directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' /usr/bin/cmake -S/build/libminc-2.4.03 -B/build/libminc-2.4.03/obj-arm-linux-gnueabihf --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/libminc-2.4.03/obj-arm-linux-gnueabihf/CMakeFiles /build/libminc-2.4.03/obj-arm-linux-gnueabihf//CMakeFiles/progress.marks @@ -773,9 +844,9 @@ cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03 /build/libminc-2.4.03/obj-arm-linux-gnueabihf /build/libminc-2.4.03/obj-arm-linux-gnueabihf /build/libminc-2.4.03/obj-arm-linux-gnueabihf/CMakeFiles/minc2_static.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03 /build/libminc-2.4.03/obj-arm-linux-gnueabihf /build/libminc-2.4.03/obj-arm-linux-gnueabihf /build/libminc-2.4.03/obj-arm-linux-gnueabihf/CMakeFiles/minc2.dir/DependInfo.cmake --color= +Dependee "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/CMakeFiles/minc2.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/CMakeFiles/minc2.dir/depend.internal". Dependee "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/CMakeFiles/minc2_static.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/CMakeFiles/minc2_static.dir/depend.internal". Dependee "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/CMakeFiles/minc2_static.dir/depend.internal". -Dependee "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/CMakeFiles/minc2.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/CMakeFiles/minc2.dir/depend.internal". Dependee "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/CMakeFiles/minc2.dir/depend.internal". Scanning dependencies of target minc2 make[3]: Leaving directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' @@ -785,16 +856,46 @@ make -f CMakeFiles/minc2_static.dir/build.make CMakeFiles/minc2_static.dir/build make[3]: Entering directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' make[3]: Entering directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' +[ 0%] Building C object CMakeFiles/minc2.dir/libsrc2/datatype.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc2/datatype.c.o -c /build/libminc-2.4.03/libsrc2/datatype.c +[ 0%] Building C object CMakeFiles/minc2_static.dir/libsrc2/convert.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc2/convert.c.o -c /build/libminc-2.4.03/libsrc2/convert.c [ 1%] Building C object CMakeFiles/minc2.dir/libsrc2/convert.c.o -[ 1%] Building C object CMakeFiles/minc2.dir/libsrc2/datatype.c.o -[ 1%] Building C object CMakeFiles/minc2.dir/libsrc2/free.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc2/convert.c.o -c /build/libminc-2.4.03/libsrc2/convert.c -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc2/datatype.c.o -c /build/libminc-2.4.03/libsrc2/datatype.c [ 2%] Building C object CMakeFiles/minc2.dir/libsrc2/dimension.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc2/free.c.o -c /build/libminc-2.4.03/libsrc2/free.c /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc2/dimension.c.o -c /build/libminc-2.4.03/libsrc2/dimension.c -[ 2%] Building C object CMakeFiles/minc2_static.dir/libsrc2/convert.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc2/convert.c.o -c /build/libminc-2.4.03/libsrc2/convert.c +/build/libminc-2.4.03/libsrc2/convert.c: In function 'miconvert_voxel_to_real': +/build/libminc-2.4.03/libsrc2/convert.c:107:39: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 107 | miget_slice_range(volume, coords, ncoords, &slice_max, &slice_min); + | ^~~~~~~ +/build/libminc-2.4.03/libsrc2/convert.c: In function 'miset_real_value': +/build/libminc-2.4.03/libsrc2/convert.c:256:45: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 256 | miconvert_real_to_voxel(volume, coords, ndims, value, &voxel); + | ^~~~~ +/build/libminc-2.4.03/libsrc2/convert.c: In function 'miget_volume_real_range': +/build/libminc-2.4.03/libsrc2/convert.c:528:23: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + 528 | buffer = malloc(n * sizeof(double)); + | ^ +/build/libminc-2.4.03/libsrc2/convert.c:554:23: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + 554 | buffer = malloc(n * sizeof(double)); + | ^ +/build/libminc-2.4.03/libsrc2/convert.c: In function 'miconvert_voxel_to_real': +/build/libminc-2.4.03/libsrc2/convert.c:107:39: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 107 | miget_slice_range(volume, coords, ncoords, &slice_max, &slice_min); + | ^~~~~~~ +/build/libminc-2.4.03/libsrc2/convert.c: In function 'miset_real_value': +/build/libminc-2.4.03/libsrc2/convert.c:256:45: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 256 | miconvert_real_to_voxel(volume, coords, ndims, value, &voxel); + | ^~~~~ +/build/libminc-2.4.03/libsrc2/convert.c: In function 'miget_volume_real_range': +/build/libminc-2.4.03/libsrc2/convert.c:528:23: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + 528 | buffer = malloc(n * sizeof(double)); + | ^ +/build/libminc-2.4.03/libsrc2/convert.c:554:23: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + 554 | buffer = malloc(n * sizeof(double)); + | ^ +[ 2%] Building C object CMakeFiles/minc2.dir/libsrc2/free.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc2/free.c.o -c /build/libminc-2.4.03/libsrc2/free.c /build/libminc-2.4.03/libsrc2/dimension.c: In function 'micopy_dimension': /build/libminc-2.4.03/libsrc2/dimension.c:99:61: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'size_t' {aka 'unsigned int'} may change value [-Wconversion] 99 | handle->offsets = ( double * ) malloc ( dim_ptr->length * sizeof ( double ) ); @@ -822,22 +923,14 @@ 580 | volume->dim_indices = ( int * ) malloc ( volume->number_of_dims * sizeof ( int ) ); | ^ /build/libminc-2.4.03/libsrc2/dimension.c: In function 'miget_dimension_offsets': -/build/libminc-2.4.03/libsrc2/convert.c: In function 'miconvert_voxel_to_real': /build/libminc-2.4.03/libsrc2/dimension.c:1036:43: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'double' may change value [-Wconversion] 1036 | offsets[j] = dimension->start + ( i * dimension->step ); | ^ -/build/libminc-2.4.03/libsrc2/convert.c:107:39: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 107 | miget_slice_range(volume, coords, ncoords, &slice_max, &slice_min); - | ^~~~~~~ /build/libminc-2.4.03/libsrc2/dimension.c: In function 'miset_dimension_offsets': /build/libminc-2.4.03/libsrc2/dimension.c:1083:47: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'size_t' {aka 'unsigned int'} may change value [-Wconversion] 1083 | ( double * ) malloc ( dimension->length * sizeof ( double ) ); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc2/convert.c: In function 'miset_real_value': /build/libminc-2.4.03/libsrc2/dimension.c: In function 'miset_dimension_sampling_flag': -/build/libminc-2.4.03/libsrc2/convert.c:256:45: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 256 | miconvert_real_to_voxel(volume, coords, ndims, value, &voxel); - | ^~~~~ /build/libminc-2.4.03/libsrc2/dimension.c:1136:21: warning: unsigned conversion from 'int' to 'midimattr_t' {aka 'unsigned int'} changes value from '-2' to '4294967294' [-Wsign-conversion] 1136 | dimension->attr &= ~MI_DIMATTR_REGULARLY_SAMPLED; | ^~ @@ -854,32 +947,10 @@ /build/libminc-2.4.03/libsrc2/dimension.c:1369:63: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'double' may change value [-Wconversion] 1369 | *start_ptr = dimension->start + ( dimension->step * ( dimension->length - 1 ) ); | ^ -/build/libminc-2.4.03/libsrc2/convert.c: In function 'miget_volume_real_range': -/build/libminc-2.4.03/libsrc2/convert.c:528:23: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - 528 | buffer = malloc(n * sizeof(double)); - | ^ /build/libminc-2.4.03/libsrc2/dimension.c: In function 'miset_dimension_widths': -/build/libminc-2.4.03/libsrc2/convert.c:554:23: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - 554 | buffer = malloc(n * sizeof(double)); - | ^ -/build/libminc-2.4.03/libsrc2/convert.c: In function 'miconvert_voxel_to_real': -/build/libminc-2.4.03/libsrc2/convert.c:107:39: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 107 | miget_slice_range(volume, coords, ncoords, &slice_max, &slice_min); - | ^~~~~~~ /build/libminc-2.4.03/libsrc2/dimension.c:1651:65: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'size_t' {aka 'unsigned int'} may change value [-Wconversion] 1651 | dimension->widths = ( double * ) malloc ( dimension->length * sizeof ( double ) ); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc2/convert.c: In function 'miset_real_value': -/build/libminc-2.4.03/libsrc2/convert.c:256:45: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 256 | miconvert_real_to_voxel(volume, coords, ndims, value, &voxel); - | ^~~~~ -/build/libminc-2.4.03/libsrc2/convert.c: In function 'miget_volume_real_range': -/build/libminc-2.4.03/libsrc2/convert.c:528:23: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - 528 | buffer = malloc(n * sizeof(double)); - | ^ -/build/libminc-2.4.03/libsrc2/convert.c:554:23: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - 554 | buffer = malloc(n * sizeof(double)); - | ^ [ 2%] Building C object CMakeFiles/minc2.dir/libsrc2/grpattr.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc2/grpattr.c.o -c /build/libminc-2.4.03/libsrc2/grpattr.c [ 3%] Building C object CMakeFiles/minc2.dir/libsrc2/hyper.c.o @@ -943,6 +1014,8 @@ /build/libminc-2.4.03/libsrc2/grpattr.c:910:41: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 910 | std_name[i] = path[pch - path + 1 + i]; | ^ +[ 4%] Building C object CMakeFiles/minc2_static.dir/libsrc2/datatype.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc2/datatype.c.o -c /build/libminc-2.4.03/libsrc2/datatype.c /build/libminc-2.4.03/libsrc2/hyper.c: In function 'mirw_hyperslab_raw': /build/libminc-2.4.03/libsrc2/hyper.c:256:21: warning: conversion from 'misize_t' {aka 'const long long unsigned int'} to 'size_t' {aka 'unsigned int'} may change value [-Wconversion] 256 | icount[i] = count[i]; @@ -1060,26 +1133,77 @@ /build/libminc-2.4.03/libsrc2/hyper.c:1135:25: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'size_t' {aka 'unsigned int'} may change value [-Wconversion] 1135 | restructure_array(ndims, temp_buffer2, icount, H5Tget_size(buffer_type_id), imap, idir); | ^~~~~ -[ 3%] Building C object CMakeFiles/minc2.dir/libsrc2/label.c.o +[ 4%] Building C object CMakeFiles/minc2_static.dir/libsrc2/dimension.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc2/dimension.c.o -c /build/libminc-2.4.03/libsrc2/dimension.c +/build/libminc-2.4.03/libsrc2/dimension.c: In function 'micopy_dimension': +/build/libminc-2.4.03/libsrc2/dimension.c:99:61: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'size_t' {aka 'unsigned int'} may change value [-Wconversion] + 99 | handle->offsets = ( double * ) malloc ( dim_ptr->length * sizeof ( double ) ); + | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc2/dimension.c:135:60: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'size_t' {aka 'unsigned int'} may change value [-Wconversion] + 135 | handle->widths = ( double * ) malloc ( dim_ptr->length * sizeof ( double ) ); + | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc2/dimension.c: In function 'micreate_dimension': +/build/libminc-2.4.03/libsrc2/dimension.c:288:51: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'size_t' {aka 'unsigned int'} may change value [-Wconversion] + 288 | handle->widths = ( double * ) malloc ( length * sizeof ( double ) ); + | ~~~~~~~^~~~~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc2/dimension.c: In function 'miget_volume_dimensions': +/build/libminc-2.4.03/libsrc2/dimension.c:417:20: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 417 | number_of_dims = volume->number_of_dims; + | ^~~~~~ +/build/libminc-2.4.03/libsrc2/dimension.c:422:16: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 422 | max_dims = array_length; + | ^~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc2/dimension.c: In function 'miset_apparent_dimension_order': +/build/libminc-2.4.03/libsrc2/dimension.c:486:69: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + 486 | volume->dim_indices = ( int * ) malloc ( volume->number_of_dims * sizeof ( int ) ); + | ^ +/build/libminc-2.4.03/libsrc2/dimension.c: In function 'miset_apparent_dimension_order_by_name': +/build/libminc-2.4.03/libsrc2/dimension.c:580:69: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + 580 | volume->dim_indices = ( int * ) malloc ( volume->number_of_dims * sizeof ( int ) ); + | ^ +/build/libminc-2.4.03/libsrc2/dimension.c: In function 'miget_dimension_offsets': +/build/libminc-2.4.03/libsrc2/dimension.c:1036:43: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'double' may change value [-Wconversion] + 1036 | offsets[j] = dimension->start + ( i * dimension->step ); + | ^ +/build/libminc-2.4.03/libsrc2/dimension.c: In function 'miset_dimension_offsets': +/build/libminc-2.4.03/libsrc2/dimension.c:1083:47: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'size_t' {aka 'unsigned int'} may change value [-Wconversion] + 1083 | ( double * ) malloc ( dimension->length * sizeof ( double ) ); + | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc2/dimension.c: In function 'miset_dimension_sampling_flag': +/build/libminc-2.4.03/libsrc2/dimension.c:1136:21: warning: unsigned conversion from 'int' to 'midimattr_t' {aka 'unsigned int'} changes value from '-2' to '4294967294' [-Wsign-conversion] + 1136 | dimension->attr &= ~MI_DIMATTR_REGULARLY_SAMPLED; + | ^~ +/build/libminc-2.4.03/libsrc2/dimension.c:1138:21: warning: unsigned conversion from 'int' to 'midimattr_t' {aka 'unsigned int'} changes value from '-3' to '4294967293' [-Wsign-conversion] + 1138 | dimension->attr &= ~MI_DIMATTR_NOT_REGULARLY_SAMPLED; + | ^~ +/build/libminc-2.4.03/libsrc2/dimension.c: In function 'miget_dimension_start': +/build/libminc-2.4.03/libsrc2/dimension.c:1356:57: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'double' may change value [-Wconversion] + 1356 | *start_ptr = dimension->start + ( dimension->step * ( dimension->length - 1 ) ); + | ^ +/build/libminc-2.4.03/libsrc2/dimension.c:1362:61: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'double' may change value [-Wconversion] + 1362 | *start_ptr = dimension->start + ( dimension->step * ( dimension->length - 1 ) ); + | ^ +/build/libminc-2.4.03/libsrc2/dimension.c:1369:63: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'double' may change value [-Wconversion] + 1369 | *start_ptr = dimension->start + ( dimension->step * ( dimension->length - 1 ) ); + | ^ +/build/libminc-2.4.03/libsrc2/dimension.c: In function 'miset_dimension_widths': +/build/libminc-2.4.03/libsrc2/dimension.c:1651:65: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'size_t' {aka 'unsigned int'} may change value [-Wconversion] + 1651 | dimension->widths = ( double * ) malloc ( dimension->length * sizeof ( double ) ); + | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ +[ 4%] Building C object CMakeFiles/minc2.dir/libsrc2/label.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc2/label.c.o -c /build/libminc-2.4.03/libsrc2/label.c -[ 4%] Building C object CMakeFiles/minc2_static.dir/libsrc2/datatype.c.o /build/libminc-2.4.03/libsrc2/label.c: In function 'miswap4': /build/libminc-2.4.03/libsrc2/label.c:40:12: warning: conversion to 'int' from 'unsigned int' may change the sign of the result [-Wsign-conversion] 40 | return (tmp); | ^ -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc2/datatype.c.o -c /build/libminc-2.4.03/libsrc2/datatype.c /build/libminc-2.4.03/libsrc2/label.c: In function 'miget_label_value_by_index': /build/libminc-2.4.03/libsrc2/label.c:199:51: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 199 | result = H5Tget_member_value(volume->mtype_id,idx,value); | ^~~ [ 5%] Building C object CMakeFiles/minc2.dir/libsrc2/m2util.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc2/m2util.c.o -c /build/libminc-2.4.03/libsrc2/m2util.c -[ 5%] Building C object CMakeFiles/minc2_static.dir/libsrc2/dimension.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc2/dimension.c.o -c /build/libminc-2.4.03/libsrc2/dimension.c [ 5%] Building C object CMakeFiles/minc2.dir/libsrc2/record.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc2/record.c.o -c /build/libminc-2.4.03/libsrc2/record.c -[ 6%] Building C object CMakeFiles/minc2.dir/libsrc2/slice.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc2/slice.c.o -c /build/libminc-2.4.03/libsrc2/slice.c /build/libminc-2.4.03/libsrc2/record.c: In function 'miget_record_field_name': /build/libminc-2.4.03/libsrc2/record.c:57:50: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 57 | *name = H5Tget_member_name(volume->ftype_id, index); @@ -1140,13 +1264,9 @@ 1803 | count[0] = scale; | ^~~~~ /build/libminc-2.4.03/libsrc2/m2util.c: In function 'alloc1d': -/build/libminc-2.4.03/libsrc2/slice.c: In function 'mirw_slice_minmax': /build/libminc-2.4.03/libsrc2/m2util.c:1914:52: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 1914 | return ( ( double * ) malloc ( sizeof ( double ) * n ) ); | ^ -/build/libminc-2.4.03/libsrc2/slice.c:72:11: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 72 | ndims = H5Sget_simple_extent_ndims ( fspc_id ); - | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/libminc-2.4.03/libsrc2/m2util.c: In function 'alloc2d': /build/libminc-2.4.03/libsrc2/m2util.c:1923:34: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 1923 | mat = ( double ** ) malloc ( n * sizeof ( double * ) ); @@ -1154,67 +1274,79 @@ /build/libminc-2.4.03/libsrc2/m2util.c:1930:38: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 1930 | mat[i] = ( double * ) malloc ( m * sizeof ( double ) ); | ^ -/build/libminc-2.4.03/libsrc2/dimension.c: In function 'micopy_dimension': -/build/libminc-2.4.03/libsrc2/dimension.c:99:61: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'size_t' {aka 'unsigned int'} may change value [-Wconversion] - 99 | handle->offsets = ( double * ) malloc ( dim_ptr->length * sizeof ( double ) ); - | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc2/dimension.c:135:60: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'size_t' {aka 'unsigned int'} may change value [-Wconversion] - 135 | handle->widths = ( double * ) malloc ( dim_ptr->length * sizeof ( double ) ); - | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc2/dimension.c: In function 'micreate_dimension': -/build/libminc-2.4.03/libsrc2/dimension.c:288:51: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'size_t' {aka 'unsigned int'} may change value [-Wconversion] - 288 | handle->widths = ( double * ) malloc ( length * sizeof ( double ) ); - | ~~~~~~~^~~~~~~~~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc2/dimension.c: In function 'miget_volume_dimensions': -/build/libminc-2.4.03/libsrc2/dimension.c:417:20: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 417 | number_of_dims = volume->number_of_dims; - | ^~~~~~ -/build/libminc-2.4.03/libsrc2/dimension.c:422:16: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 422 | max_dims = array_length; - | ^~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc2/dimension.c: In function 'miset_apparent_dimension_order': -/build/libminc-2.4.03/libsrc2/dimension.c:486:69: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - 486 | volume->dim_indices = ( int * ) malloc ( volume->number_of_dims * sizeof ( int ) ); - | ^ -/build/libminc-2.4.03/libsrc2/dimension.c: In function 'miset_apparent_dimension_order_by_name': -/build/libminc-2.4.03/libsrc2/dimension.c:580:69: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - 580 | volume->dim_indices = ( int * ) malloc ( volume->number_of_dims * sizeof ( int ) ); - | ^ -/build/libminc-2.4.03/libsrc2/dimension.c: In function 'miget_dimension_offsets': -/build/libminc-2.4.03/libsrc2/dimension.c:1036:43: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'double' may change value [-Wconversion] - 1036 | offsets[j] = dimension->start + ( i * dimension->step ); - | ^ -/build/libminc-2.4.03/libsrc2/dimension.c: In function 'miset_dimension_offsets': -/build/libminc-2.4.03/libsrc2/dimension.c:1083:47: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'size_t' {aka 'unsigned int'} may change value [-Wconversion] - 1083 | ( double * ) malloc ( dimension->length * sizeof ( double ) ); - | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc2/dimension.c: In function 'miset_dimension_sampling_flag': -/build/libminc-2.4.03/libsrc2/dimension.c:1136:21: warning: unsigned conversion from 'int' to 'midimattr_t' {aka 'unsigned int'} changes value from '-2' to '4294967294' [-Wsign-conversion] - 1136 | dimension->attr &= ~MI_DIMATTR_REGULARLY_SAMPLED; - | ^~ -/build/libminc-2.4.03/libsrc2/dimension.c:1138:21: warning: unsigned conversion from 'int' to 'midimattr_t' {aka 'unsigned int'} changes value from '-3' to '4294967293' [-Wsign-conversion] - 1138 | dimension->attr &= ~MI_DIMATTR_NOT_REGULARLY_SAMPLED; - | ^~ -/build/libminc-2.4.03/libsrc2/dimension.c: In function 'miget_dimension_start': -/build/libminc-2.4.03/libsrc2/dimension.c:1356:57: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'double' may change value [-Wconversion] - 1356 | *start_ptr = dimension->start + ( dimension->step * ( dimension->length - 1 ) ); - | ^ -/build/libminc-2.4.03/libsrc2/dimension.c:1362:61: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'double' may change value [-Wconversion] - 1362 | *start_ptr = dimension->start + ( dimension->step * ( dimension->length - 1 ) ); - | ^ -/build/libminc-2.4.03/libsrc2/dimension.c:1369:63: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'double' may change value [-Wconversion] - 1369 | *start_ptr = dimension->start + ( dimension->step * ( dimension->length - 1 ) ); - | ^ -/build/libminc-2.4.03/libsrc2/dimension.c: In function 'miset_dimension_widths': -/build/libminc-2.4.03/libsrc2/dimension.c:1651:65: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'size_t' {aka 'unsigned int'} may change value [-Wconversion] - 1651 | dimension->widths = ( double * ) malloc ( dimension->length * sizeof ( double ) ); - | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ +[ 6%] Building C object CMakeFiles/minc2.dir/libsrc2/slice.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc2/slice.c.o -c /build/libminc-2.4.03/libsrc2/slice.c +/build/libminc-2.4.03/libsrc2/slice.c: In function 'mirw_slice_minmax': +/build/libminc-2.4.03/libsrc2/slice.c:72:11: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 72 | ndims = H5Sget_simple_extent_ndims ( fspc_id ); + | ^~~~~~~~~~~~~~~~~~~~~~~~~~ [ 6%] Building C object CMakeFiles/minc2.dir/libsrc2/valid.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc2/valid.c.o -c /build/libminc-2.4.03/libsrc2/valid.c -[ 6%] Building C object CMakeFiles/minc2.dir/libsrc2/volprops.c.o +[ 7%] Building C object CMakeFiles/minc2_static.dir/libsrc2/free.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc2/free.c.o -c /build/libminc-2.4.03/libsrc2/free.c +[ 7%] Building C object CMakeFiles/minc2_static.dir/libsrc2/grpattr.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc2/grpattr.c.o -c /build/libminc-2.4.03/libsrc2/grpattr.c +[ 7%] Building C object CMakeFiles/minc2.dir/libsrc2/volprops.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc2/volprops.c.o -c /build/libminc-2.4.03/libsrc2/volprops.c -[ 7%] Building C object CMakeFiles/minc2.dir/libsrc2/volume.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc2/volume.c.o -c /build/libminc-2.4.03/libsrc2/volume.c +/build/libminc-2.4.03/libsrc2/grpattr.c: In function 'full_path_for_attr': +/build/libminc-2.4.03/libsrc2/grpattr.c:41:24: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 41 | snprintf(fullpath, length, MI_ROOT_PATH "/image/%d", + | ^~~~~~ +/build/libminc-2.4.03/libsrc2/grpattr.c:48:46: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 48 | strncpy ( fullpath, MI_ROOT_PATH "/" , length ); + | ^~~~~~ +/build/libminc-2.4.03/libsrc2/grpattr.c:50:58: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 50 | strncpy ( fullpath, MI_ROOT_PATH "/" MI_INFO_NAME, length ); + | ^~~~~~ +/build/libminc-2.4.03/libsrc2/grpattr.c:55:35: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 55 | strncat(fullpath, "/", length - strlen(fullpath) - 1); + | ^ +/build/libminc-2.4.03/libsrc2/grpattr.c:58:35: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 58 | strncat(fullpath, path, length - strlen(fullpath) - 1); + | ^ +/build/libminc-2.4.03/libsrc2/grpattr.c: In function 'full_path_for_group': +/build/libminc-2.4.03/libsrc2/grpattr.c:64:52: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 64 | strncpy(fullpath, MI_ROOT_PATH "/" MI_INFO_NAME, length); + | ^~~~~~ +/build/libminc-2.4.03/libsrc2/grpattr.c:67:35: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 67 | strncat(fullpath, "/", length - strlen(fullpath) - 1); + | ^ +/build/libminc-2.4.03/libsrc2/grpattr.c:70:35: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 70 | strncat(fullpath, path, length - strlen(fullpath) - 1); + | ^ +/build/libminc-2.4.03/libsrc2/grpattr.c: In function 'milist_recursion': +/build/libminc-2.4.03/libsrc2/grpattr.c:124:22: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 124 | data->frame_ptr->grp_idx ); + | ~~~~~~~~~~~~~~~^~~~~~~~~ +/build/libminc-2.4.03/libsrc2/grpattr.c:157:58: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 157 | data->frame_ptr->grp_idx - 1, + | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~ +/build/libminc-2.4.03/libsrc2/grpattr.c: In function 'milist_attr_op': +/build/libminc-2.4.03/libsrc2/grpattr.c:198:44: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 198 | strncpy ( data->name_ptr, attr_name, data->name_len ); + | ~~~~^~~~~~~~~~ +/build/libminc-2.4.03/libsrc2/grpattr.c: In function 'milist_attr_next': +/build/libminc-2.4.03/libsrc2/grpattr.c:223:49: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 223 | strncpy ( path, data->frame_ptr->relpath, maxpath ); + | ^~~~~~~ +/build/libminc-2.4.03/libsrc2/grpattr.c: In function 'milist_grp_next': +/build/libminc-2.4.03/libsrc2/grpattr.c:314:49: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 314 | strncpy ( path, data->frame_ptr->relpath, maxpath ); + | ^~~~~~~ +/build/libminc-2.4.03/libsrc2/grpattr.c:315:48: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 315 | strncpy ( data->frame_ptr->relpath, tmp, maxpath ); + | ^~~~~~~ +/build/libminc-2.4.03/libsrc2/grpattr.c: In function 'miget_attr_length': +/build/libminc-2.4.03/libsrc2/grpattr.c:551:15: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'size_t' {aka 'unsigned int'} may change value [-Wconversion] + 551 | *length = hdf_dims[0]; + | ^~~~~~~~ +/build/libminc-2.4.03/libsrc2/grpattr.c: In function 'miset_attr_values': +/build/libminc-2.4.03/libsrc2/grpattr.c:906:31: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 906 | slength = strlen ( path ) - ( pch - path ); + | ^ +/build/libminc-2.4.03/libsrc2/grpattr.c:910:41: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 910 | std_name[i] = path[pch - path + 1 + i]; + | ^ /build/libminc-2.4.03/libsrc2/volprops.c: In function 'miget_volume_props': /build/libminc-2.4.03/libsrc2/volprops.c:133:60: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 133 | handle->edge_lengths = (int *)malloc(handle->edge_count*sizeof(int)); @@ -1232,6 +1364,8 @@ /build/libminc-2.4.03/libsrc2/volprops.c:432:52: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 432 | props->edge_lengths = (int *) malloc(edge_count*sizeof(int)); | ^ +[ 8%] Building C object CMakeFiles/minc2.dir/libsrc2/volume.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc2/volume.c.o -c /build/libminc-2.4.03/libsrc2/volume.c /build/libminc-2.4.03/libsrc2/volume.c: In function '_hdf_open': /build/libminc-2.4.03/libsrc2/volume.c:120:117: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 120 | H5Pset_cache(prp_id, 0, 2503, miget_cfg_present(MICFG_MINC_FILE_CACHE)?miget_cfg_int(MICFG_MINC_FILE_CACHE)*100000:_MI1_MAX_VAR_BUFFER_SIZE*10, 1.0); @@ -1303,144 +1437,16 @@ /build/libminc-2.4.03/libsrc2/volume.c:1511:59: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 1511 | char *tmp_nm = H5Tget_member_name(handle->ftype_id, i); | ^ -[ 7%] Building C object CMakeFiles/minc2.dir/libcommon/minc2_error.c.o +[ 8%] Building C object CMakeFiles/minc2.dir/libcommon/minc2_error.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libcommon/minc2_error.c.o -c /build/libminc-2.4.03/libcommon/minc2_error.c -[ 8%] Building C object CMakeFiles/minc2.dir/libcommon/minc_config.c.o +[ 9%] Building C object CMakeFiles/minc2_static.dir/libsrc2/hyper.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc2/hyper.c.o -c /build/libminc-2.4.03/libsrc2/hyper.c +[ 10%] Building C object CMakeFiles/minc2.dir/libcommon/minc_config.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libcommon/minc_config.c.o -c /build/libminc-2.4.03/libcommon/minc_config.c /build/libminc-2.4.03/libcommon/minc_config.c: In function 'miread_cfg': /build/libminc-2.4.03/libcommon/minc_config.c:84:42: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 84 | strncpy(buffer, tmp, maxlen); | ^~~~~~ -[ 8%] Building C object CMakeFiles/minc2.dir/libcommon/minc_error.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libcommon/minc_error.c.o -c /build/libminc-2.4.03/libcommon/minc_error.c -[ 9%] Building C object CMakeFiles/minc2_static.dir/libsrc2/free.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc2/free.c.o -c /build/libminc-2.4.03/libsrc2/free.c -[ 10%] Building C object CMakeFiles/minc2.dir/libcommon/ParseArgv.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libcommon/ParseArgv.c.o -c /build/libminc-2.4.03/libcommon/ParseArgv.c -[ 10%] Building C object CMakeFiles/minc2_static.dir/libsrc2/grpattr.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc2/grpattr.c.o -c /build/libminc-2.4.03/libsrc2/grpattr.c -/build/libminc-2.4.03/libcommon/ParseArgv.c: In function 'PrintUsage': -/build/libminc-2.4.03/libcommon/ParseArgv.c:439:32: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 439 | numSpaces = width + 1 - strlen(infoPtr->key); - | ^ -/build/libminc-2.4.03/libcommon/ParseArgv.c:439:22: warning: conversion to 'int' from 'size_t' {aka 'unsigned int'} may change the sign of the result [-Wsign-conversion] - 439 | numSpaces = width + 1 - strlen(infoPtr->key); - | ^~~~~ -/build/libminc-2.4.03/libsrc2/grpattr.c: In function 'full_path_for_attr': -/build/libminc-2.4.03/libsrc2/grpattr.c:41:24: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 41 | snprintf(fullpath, length, MI_ROOT_PATH "/image/%d", - | ^~~~~~ -/build/libminc-2.4.03/libsrc2/grpattr.c:48:46: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 48 | strncpy ( fullpath, MI_ROOT_PATH "/" , length ); - | ^~~~~~ -/build/libminc-2.4.03/libsrc2/grpattr.c:50:58: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 50 | strncpy ( fullpath, MI_ROOT_PATH "/" MI_INFO_NAME, length ); - | ^~~~~~ -/build/libminc-2.4.03/libsrc2/grpattr.c:55:35: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 55 | strncat(fullpath, "/", length - strlen(fullpath) - 1); - | ^ -/build/libminc-2.4.03/libsrc2/grpattr.c:58:35: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 58 | strncat(fullpath, path, length - strlen(fullpath) - 1); - | ^ -/build/libminc-2.4.03/libsrc2/grpattr.c: In function 'full_path_for_group': -/build/libminc-2.4.03/libsrc2/grpattr.c:64:52: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 64 | strncpy(fullpath, MI_ROOT_PATH "/" MI_INFO_NAME, length); - | ^~~~~~ -/build/libminc-2.4.03/libsrc2/grpattr.c:67:35: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 67 | strncat(fullpath, "/", length - strlen(fullpath) - 1); - | ^ -/build/libminc-2.4.03/libsrc2/grpattr.c:70:35: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 70 | strncat(fullpath, path, length - strlen(fullpath) - 1); - | ^ -/build/libminc-2.4.03/libsrc2/grpattr.c: In function 'milist_recursion': -/build/libminc-2.4.03/libsrc2/grpattr.c:124:22: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 124 | data->frame_ptr->grp_idx ); - | ~~~~~~~~~~~~~~~^~~~~~~~~ -/build/libminc-2.4.03/libsrc2/grpattr.c:157:58: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 157 | data->frame_ptr->grp_idx - 1, - | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~ -/build/libminc-2.4.03/libsrc2/grpattr.c: In function 'milist_attr_op': -/build/libminc-2.4.03/libsrc2/grpattr.c:198:44: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 198 | strncpy ( data->name_ptr, attr_name, data->name_len ); - | ~~~~^~~~~~~~~~ -/build/libminc-2.4.03/libsrc2/grpattr.c: In function 'milist_attr_next': -/build/libminc-2.4.03/libsrc2/grpattr.c:223:49: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 223 | strncpy ( path, data->frame_ptr->relpath, maxpath ); - | ^~~~~~~ -/build/libminc-2.4.03/libsrc2/grpattr.c: In function 'milist_grp_next': -/build/libminc-2.4.03/libsrc2/grpattr.c:314:49: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 314 | strncpy ( path, data->frame_ptr->relpath, maxpath ); - | ^~~~~~~ -/build/libminc-2.4.03/libsrc2/grpattr.c:315:48: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 315 | strncpy ( data->frame_ptr->relpath, tmp, maxpath ); - | ^~~~~~~ -/build/libminc-2.4.03/libsrc2/grpattr.c: In function 'miget_attr_length': -/build/libminc-2.4.03/libsrc2/grpattr.c:551:15: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'size_t' {aka 'unsigned int'} may change value [-Wconversion] - 551 | *length = hdf_dims[0]; - | ^~~~~~~~ -/build/libminc-2.4.03/libsrc2/grpattr.c: In function 'miset_attr_values': -/build/libminc-2.4.03/libsrc2/grpattr.c:906:31: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 906 | slength = strlen ( path ) - ( pch - path ); - | ^ -/build/libminc-2.4.03/libsrc2/grpattr.c:910:41: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 910 | std_name[i] = path[pch - path + 1 + i]; - | ^ -In file included from /build/libminc-2.4.03/libsrc2/volume.c:33: -/build/libminc-2.4.03/libsrc2/minc2_private.h:14:22: warning: '%s' directive writing up to 127 bytes into a region of size 107 [-Wformat-overflow=] - 14 | #define MI_ROOT_PATH "/minc-2.0" - | ^~~~~~~~~~~ -/build/libminc-2.4.03/libsrc2/volume.c:1216:17: note: in expansion of macro 'MI_ROOT_PATH' - 1216 | sprintf(path, MI_ROOT_PATH "/dimensions/%s", dimname); - | ^~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc2/volume.c:1749:53: note: format string is defined here - 1749 | miset_attribute(volume, MI_ROOT_PATH "/image/0/image", "valid_range", - | ^~ -In file included from /usr/include/stdio.h:867, - from /usr/include/hdf5/serial/H5Epublic.h:20, - from /usr/include/hdf5/serial/hdf5.h:26, - from /build/libminc-2.4.03/libsrc2/volume.c:8: -/usr/include/arm-linux-gnueabihf/bits/stdio2.h:36:10: note: '__builtin___sprintf_chk' output between 22 and 149 bytes into a destination of size 128 - 36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 37 | __bos (__s), __fmt, __va_arg_pack ()); - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -[ 10%] Building C object CMakeFiles/minc2.dir/libcommon/read_file_names.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libcommon/read_file_names.c.o -c /build/libminc-2.4.03/libcommon/read_file_names.c -/build/libminc-2.4.03/libcommon/read_file_names.c: In function 'read_file_names': -/build/libminc-2.4.03/libcommon/read_file_names.c:53:34: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - 53 | files = malloc(sizeof(*files) * array_size); - | ^ -/build/libminc-2.4.03/libcommon/read_file_names.c:76:48: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - 76 | files = realloc(files, sizeof(*files) * array_size); - | ^ -[ 11%] Building C object CMakeFiles/minc2.dir/libcommon/restructure.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libcommon/restructure.c.o -c /build/libminc-2.4.03/libcommon/restructure.c -/build/libminc-2.4.03/libcommon/restructure.c: In function 'restructure_array': -/build/libminc-2.4.03/libcommon/restructure.c:134:21: warning: unsigned conversion from 'int' to 'size_t' {aka 'unsigned int'} changes value from '-1' to '4294967295' [-Wsign-conversion] - 134 | offset_next = -1; /* Initialize. */ - | ^ -/build/libminc-2.4.03/libcommon/restructure.c:64:40: warning: conversion from 'int' to 'unsigned char' may change value [-Wconversion] - 64 | #define BIT_SET(bm, i) (bm[(i) / 8] |= (1 << ((i) % 8))) - | ^ -/build/libminc-2.4.03/libcommon/restructure.c:150:7: note: in expansion of macro 'BIT_SET' - 150 | BIT_SET(bitmap, offset_start); - | ^~~~~~~ -/build/libminc-2.4.03/libcommon/restructure.c:64:40: warning: conversion from 'int' to 'unsigned char' may change value [-Wconversion] - 64 | #define BIT_SET(bm, i) (bm[(i) / 8] |= (1 << ((i) % 8))) - | ^ -/build/libminc-2.4.03/libcommon/restructure.c:204:11: note: in expansion of macro 'BIT_SET' - 204 | BIT_SET(bitmap, offset_next); - | ^~~~~~~ -[ 12%] Building C object CMakeFiles/minc2_static.dir/libsrc2/hyper.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc2/hyper.c.o -c /build/libminc-2.4.03/libsrc2/hyper.c -[ 12%] Building C object CMakeFiles/minc2.dir/libcommon/time_stamp.c.o -[ 12%] Building C object CMakeFiles/minc2.dir/libsrc/dim_conversion.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libcommon/time_stamp.c.o -c /build/libminc-2.4.03/libcommon/time_stamp.c -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc/dim_conversion.c.o -c /build/libminc-2.4.03/libsrc/dim_conversion.c -[ 13%] Building C object CMakeFiles/minc2.dir/libsrc/image_conversion.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc/image_conversion.c.o -c /build/libminc-2.4.03/libsrc/image_conversion.c -[ 13%] Building C object CMakeFiles/minc2.dir/libsrc/minc_convenience.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc/minc_convenience.c.o -c /build/libminc-2.4.03/libsrc/minc_convenience.c /build/libminc-2.4.03/libsrc2/hyper.c: In function 'mirw_hyperslab_raw': /build/libminc-2.4.03/libsrc2/hyper.c:256:21: warning: conversion from 'misize_t' {aka 'const long long unsigned int'} to 'size_t' {aka 'unsigned int'} may change value [-Wconversion] 256 | icount[i] = count[i]; @@ -1503,50 +1509,7 @@ /build/libminc-2.4.03/libsrc2/hyper.c:694:27: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'size_t' {aka 'unsigned int'} may change value [-Wconversion] 694 | restructure_array(ndims, temp_buffer, icount, H5Tget_size(buffer_type_id), imap, idir); | ^~~~~ -/build/libminc-2.4.03/libsrc/image_conversion.c: In function 'miicv_setdbl': -/build/libminc-2.4.03/libsrc/image_conversion.c:399:29: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] - 399 | icvp->user_do_range = value; - | ^~~~~ -/build/libminc-2.4.03/libsrc/image_conversion.c:408:28: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] - 408 | icvp->user_do_norm = value; - | ^~~~~ -/build/libminc-2.4.03/libsrc/image_conversion.c:411:30: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] - 411 | icvp->user_user_norm = value; - | ^~~~~ -/build/libminc-2.4.03/libsrc/image_conversion.c:420:33: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] - 420 | icvp->user_do_fillvalue = value; - | ^~~~~ -/build/libminc-2.4.03/libsrc/image_conversion.c:426:31: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] - 426 | icvp->user_do_dimconv = value; - | ^~~~~ -/build/libminc-2.4.03/libsrc/image_conversion.c:429:30: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] - 429 | icvp->user_do_scalar = value; - | ^~~~~ -/build/libminc-2.4.03/libsrc/image_conversion.c:432:14: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] - 432 | ival = value; - | ^~~~~ -/build/libminc-2.4.03/libsrc/image_conversion.c:437:14: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] - 437 | ival = value; - | ^~~~~ -/build/libminc-2.4.03/libsrc/image_conversion.c:442:14: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] - 442 | ival = value; - | ^~~~~ -/build/libminc-2.4.03/libsrc/image_conversion.c:447:14: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] - 447 | ival = value; - | ^~~~~ -/build/libminc-2.4.03/libsrc/image_conversion.c:455:32: warning: conversion from 'double' to 'long int' may change value [-Wfloat-conversion] - 455 | icvp->user_dim_size[0] = value; - | ^~~~~ -/build/libminc-2.4.03/libsrc/image_conversion.c:458:32: warning: conversion from 'double' to 'long int' may change value [-Wfloat-conversion] - 458 | icvp->user_dim_size[1] = value; - | ^~~~~ -/build/libminc-2.4.03/libsrc/image_conversion.c:461:32: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] - 461 | icvp->user_keep_aspect = value; - | ^~~~~ /build/libminc-2.4.03/libsrc2/hyper.c: In function 'mirw_hyperslab_normalized': -/build/libminc-2.4.03/libsrc/image_conversion.c:475:38: warning: conversion from 'double' to 'long int' may change value [-Wfloat-conversion] - 475 | icvp->user_dim_size[idim] = value; - | ^~~~~ /build/libminc-2.4.03/libsrc2/hyper.c:922:11: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 922 | ndims = volume->number_of_dims; | ^~~~~~ @@ -1565,14 +1528,6 @@ /build/libminc-2.4.03/libsrc2/hyper.c:941:43: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] 941 | miget_hyperslab_size_hdf(buffer_type_id,ndims,hdf_count,&input_buffer_size); | ^~~~~ -/build/libminc-2.4.03/libsrc/image_conversion.c: In function 'miicv_inqint': -/build/libminc-2.4.03/libsrc/image_conversion.c:774:13: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] - 774 | *value = dvalue; - | ^~~~~~ -/build/libminc-2.4.03/libsrc/image_conversion.c: In function 'miicv_inqlong': -/build/libminc-2.4.03/libsrc/image_conversion.c:803:13: warning: conversion from 'double' to 'long int' may change value [-Wfloat-conversion] - 803 | *value = dvalue; - | ^~~~~~ /build/libminc-2.4.03/libsrc2/hyper.c:980:21: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] 980 | slice_ndims = ndims; | ^~~~~ @@ -1588,95 +1543,90 @@ /build/libminc-2.4.03/libsrc2/hyper.c:1052:31: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'size_t' {aka 'unsigned int'} may change value [-Wconversion] 1052 | temp_buffer=(double*)malloc(buffer_size); | ^~~~~~~~~~~ -In file included from /build/libminc-2.4.03/libsrc/minc_private.h:84, - from /build/libminc-2.4.03/libsrc/image_conversion.c:173: -/build/libminc-2.4.03/libsrc/image_conversion.c: In function 'MI_icv_zero_buffer': -/build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'unsigned char' may change value [-Wfloat-conversion] - 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) - | ^ -/build/libminc-2.4.03/libsrc/minc_basic.h:161:37: note: in expansion of macro 'ROUND' - 161 | *((unsigned char *) ptr) = ROUND(dvalue); \ - | ^~~~~ -/build/libminc-2.4.03/libsrc/image_conversion.c:1490:5: note: in expansion of macro 'MI_FROM_DOUBLE' - 1490 | {MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)} - | ^~~~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'signed char' may change value [-Wfloat-conversion] - 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) - | ^ -/build/libminc-2.4.03/libsrc/minc_basic.h:166:35: note: in expansion of macro 'ROUND' - 166 | *((signed char *) ptr) = ROUND(dvalue); \ - | ^~~~~ -/build/libminc-2.4.03/libsrc/image_conversion.c:1490:5: note: in expansion of macro 'MI_FROM_DOUBLE' - 1490 | {MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)} - | ^~~~~~~~~~~~~~ /build/libminc-2.4.03/libsrc2/hyper.c:1103:22: warning: conversion from 'misize_t' {aka 'const long long unsigned int'} to 'size_t' {aka 'unsigned int'} may change value [-Wconversion] 1103 | icount[i] = count[i]; | ^~~~~ /build/libminc-2.4.03/libsrc2/hyper.c:1105:25: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'size_t' {aka 'unsigned int'} may change value [-Wconversion] 1105 | restructure_array(ndims, buffer, icount, H5Tget_size(buffer_type_id),volume->dim_indices, dir); | ^~~~~ -/build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'short unsigned int' may change value [-Wfloat-conversion] - 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) - | ^ -/build/libminc-2.4.03/libsrc/minc_basic.h:175:38: note: in expansion of macro 'ROUND' - 175 | *((unsigned short *) ptr) = ROUND(dvalue); \ - | ^~~~~ -/build/libminc-2.4.03/libsrc/image_conversion.c:1490:5: note: in expansion of macro 'MI_FROM_DOUBLE' - 1490 | {MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)} - | ^~~~~~~~~~~~~~ /build/libminc-2.4.03/libsrc2/hyper.c:1116:42: warning: conversion from 'misize_t' {aka 'const long long unsigned int'} to 'size_t' {aka 'unsigned int'} may change value [-Wconversion] 1116 | icount[volume->dim_indices[i]] = count[i]; | ^~~~~ -/build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'short int' may change value [-Wfloat-conversion] - 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) - | ^ -/build/libminc-2.4.03/libsrc/minc_basic.h:180:36: note: in expansion of macro 'ROUND' - 180 | *((signed short *) ptr) = ROUND(dvalue); \ - | ^~~~~ -/build/libminc-2.4.03/libsrc/image_conversion.c:1490:5: note: in expansion of macro 'MI_FROM_DOUBLE' - 1490 | {MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)} - | ^~~~~~~~~~~~~~ /build/libminc-2.4.03/libsrc2/hyper.c:1119:40: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] 1119 | imap[volume->dim_indices[i]] = i; | ^ /build/libminc-2.4.03/libsrc2/hyper.c:1125:25: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'size_t' {aka 'unsigned int'} may change value [-Wconversion] 1125 | temp_buffer2=malloc(input_buffer_size); | ^~~~~~~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'unsigned int' may change value [-Wfloat-conversion] - 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) - | ^ -/build/libminc-2.4.03/libsrc/minc_basic.h:189:36: note: in expansion of macro 'ROUND' - 189 | *((unsigned int *) ptr) = ROUND(dvalue); \ - | ^~~~~ -/build/libminc-2.4.03/libsrc/image_conversion.c:1490:5: note: in expansion of macro 'MI_FROM_DOUBLE' - 1490 | {MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)} - | ^~~~~~~~~~~~~~ /build/libminc-2.4.03/libsrc2/hyper.c:1132:32: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'size_t' {aka 'unsigned int'} may change value [-Wconversion] 1132 | memcpy(temp_buffer2,buffer,input_buffer_size); | ^~~~~~~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] - 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) - | ^ -/build/libminc-2.4.03/libsrc/minc_basic.h:194:34: note: in expansion of macro 'ROUND' - 194 | *((signed int *) ptr) = ROUND(dvalue); \ - | ^~~~~ -/build/libminc-2.4.03/libsrc/image_conversion.c:1490:5: note: in expansion of macro 'MI_FROM_DOUBLE' - 1490 | {MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)} - | ^~~~~~~~~~~~~~ /build/libminc-2.4.03/libsrc2/hyper.c:1135:25: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'size_t' {aka 'unsigned int'} may change value [-Wconversion] 1135 | restructure_array(ndims, temp_buffer2, icount, H5Tget_size(buffer_type_id), imap, idir); | ^~~~~ -/build/libminc-2.4.03/libsrc/minc_useful.h:123:23: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] - 123 | #define MIN( x, y ) ( ((x) <= (y)) ? (x) : (y) ) - | ^ -/build/libminc-2.4.03/libsrc/minc_basic.h:200:26: note: in expansion of macro 'MIN' - 200 | *((float *) ptr) = MIN(FLT_MAX,dvalue); \ - | ^~~ -/build/libminc-2.4.03/libsrc/image_conversion.c:1490:5: note: in expansion of macro 'MI_FROM_DOUBLE' - 1490 | {MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)} - | ^~~~~~~~~~~~~~ -[ 13%] Building C object CMakeFiles/minc2_static.dir/libsrc2/label.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc2/label.c.o -c /build/libminc-2.4.03/libsrc2/label.c +[ 10%] Building C object CMakeFiles/minc2.dir/libcommon/minc_error.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libcommon/minc_error.c.o -c /build/libminc-2.4.03/libcommon/minc_error.c +[ 11%] Building C object CMakeFiles/minc2.dir/libcommon/ParseArgv.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libcommon/ParseArgv.c.o -c /build/libminc-2.4.03/libcommon/ParseArgv.c +/build/libminc-2.4.03/libcommon/ParseArgv.c: In function 'PrintUsage': +/build/libminc-2.4.03/libcommon/ParseArgv.c:439:32: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 439 | numSpaces = width + 1 - strlen(infoPtr->key); + | ^ +/build/libminc-2.4.03/libcommon/ParseArgv.c:439:22: warning: conversion to 'int' from 'size_t' {aka 'unsigned int'} may change the sign of the result [-Wsign-conversion] + 439 | numSpaces = width + 1 - strlen(infoPtr->key); + | ^~~~~ +[ 11%] Building C object CMakeFiles/minc2.dir/libcommon/read_file_names.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libcommon/read_file_names.c.o -c /build/libminc-2.4.03/libcommon/read_file_names.c +/build/libminc-2.4.03/libcommon/read_file_names.c: In function 'read_file_names': +/build/libminc-2.4.03/libcommon/read_file_names.c:53:34: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + 53 | files = malloc(sizeof(*files) * array_size); + | ^ +/build/libminc-2.4.03/libcommon/read_file_names.c:76:48: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + 76 | files = realloc(files, sizeof(*files) * array_size); + | ^ +In file included from /build/libminc-2.4.03/libsrc2/volume.c:33: +/build/libminc-2.4.03/libsrc2/minc2_private.h:14:22: warning: '%s' directive writing up to 127 bytes into a region of size 107 [-Wformat-overflow=] + 14 | #define MI_ROOT_PATH "/minc-2.0" + | ^~~~~~~~~~~ +/build/libminc-2.4.03/libsrc2/volume.c:1216:17: note: in expansion of macro 'MI_ROOT_PATH' + 1216 | sprintf(path, MI_ROOT_PATH "/dimensions/%s", dimname); + | ^~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc2/volume.c:1749:53: note: format string is defined here + 1749 | miset_attribute(volume, MI_ROOT_PATH "/image/0/image", "valid_range", + | ^~ +In file included from /usr/include/stdio.h:867, + from /usr/include/hdf5/serial/H5Epublic.h:20, + from /usr/include/hdf5/serial/hdf5.h:26, + from /build/libminc-2.4.03/libsrc2/volume.c:8: +/usr/include/arm-linux-gnueabihf/bits/stdio2.h:36:10: note: '__builtin___sprintf_chk' output between 22 and 149 bytes into a destination of size 128 + 36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 37 | __bos (__s), __fmt, __va_arg_pack ()); + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +[ 12%] Building C object CMakeFiles/minc2.dir/libcommon/restructure.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libcommon/restructure.c.o -c /build/libminc-2.4.03/libcommon/restructure.c +/build/libminc-2.4.03/libcommon/restructure.c: In function 'restructure_array': +/build/libminc-2.4.03/libcommon/restructure.c:134:21: warning: unsigned conversion from 'int' to 'size_t' {aka 'unsigned int'} changes value from '-1' to '4294967295' [-Wsign-conversion] + 134 | offset_next = -1; /* Initialize. */ + | ^ +/build/libminc-2.4.03/libcommon/restructure.c:64:40: warning: conversion from 'int' to 'unsigned char' may change value [-Wconversion] + 64 | #define BIT_SET(bm, i) (bm[(i) / 8] |= (1 << ((i) % 8))) + | ^ +/build/libminc-2.4.03/libcommon/restructure.c:150:7: note: in expansion of macro 'BIT_SET' + 150 | BIT_SET(bitmap, offset_start); + | ^~~~~~~ +/build/libminc-2.4.03/libcommon/restructure.c:64:40: warning: conversion from 'int' to 'unsigned char' may change value [-Wconversion] + 64 | #define BIT_SET(bm, i) (bm[(i) / 8] |= (1 << ((i) % 8))) + | ^ +/build/libminc-2.4.03/libcommon/restructure.c:204:11: note: in expansion of macro 'BIT_SET' + 204 | BIT_SET(bitmap, offset_next); + | ^~~~~~~ +[ 12%] Building C object CMakeFiles/minc2.dir/libcommon/time_stamp.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libcommon/time_stamp.c.o -c /build/libminc-2.4.03/libcommon/time_stamp.c +[ 12%] Building C object CMakeFiles/minc2.dir/libsrc/dim_conversion.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc/dim_conversion.c.o -c /build/libminc-2.4.03/libsrc/dim_conversion.c +[ 13%] Building C object CMakeFiles/minc2.dir/libsrc/image_conversion.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc/image_conversion.c.o -c /build/libminc-2.4.03/libsrc/image_conversion.c In file included from /build/libminc-2.4.03/libsrc/minc_private.h:84, from /build/libminc-2.4.03/libsrc/dim_conversion.c:93: /build/libminc-2.4.03/libsrc/dim_conversion.c: In function 'MI_icv_dimconvert': @@ -1806,6 +1756,125 @@ /build/libminc-2.4.03/libsrc/dim_conversion.c:734:17: note: in expansion of macro 'MI_FROM_DOUBLE' 734 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, ptr)} | ^~~~~~~~~~~~~~ +[ 13%] Building C object CMakeFiles/minc2.dir/libsrc/minc_convenience.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc/minc_convenience.c.o -c /build/libminc-2.4.03/libsrc/minc_convenience.c +/build/libminc-2.4.03/libsrc/image_conversion.c: In function 'miicv_setdbl': +/build/libminc-2.4.03/libsrc/image_conversion.c:399:29: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] + 399 | icvp->user_do_range = value; + | ^~~~~ +/build/libminc-2.4.03/libsrc/image_conversion.c:408:28: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] + 408 | icvp->user_do_norm = value; + | ^~~~~ +/build/libminc-2.4.03/libsrc/image_conversion.c:411:30: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] + 411 | icvp->user_user_norm = value; + | ^~~~~ +/build/libminc-2.4.03/libsrc/image_conversion.c:420:33: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] + 420 | icvp->user_do_fillvalue = value; + | ^~~~~ +/build/libminc-2.4.03/libsrc/image_conversion.c:426:31: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] + 426 | icvp->user_do_dimconv = value; + | ^~~~~ +/build/libminc-2.4.03/libsrc/image_conversion.c:429:30: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] + 429 | icvp->user_do_scalar = value; + | ^~~~~ +/build/libminc-2.4.03/libsrc/image_conversion.c:432:14: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] + 432 | ival = value; + | ^~~~~ +/build/libminc-2.4.03/libsrc/image_conversion.c:437:14: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] + 437 | ival = value; + | ^~~~~ +/build/libminc-2.4.03/libsrc/image_conversion.c:442:14: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] + 442 | ival = value; + | ^~~~~ +/build/libminc-2.4.03/libsrc/image_conversion.c:447:14: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] + 447 | ival = value; + | ^~~~~ +/build/libminc-2.4.03/libsrc/image_conversion.c:455:32: warning: conversion from 'double' to 'long int' may change value [-Wfloat-conversion] + 455 | icvp->user_dim_size[0] = value; + | ^~~~~ +/build/libminc-2.4.03/libsrc/image_conversion.c:458:32: warning: conversion from 'double' to 'long int' may change value [-Wfloat-conversion] + 458 | icvp->user_dim_size[1] = value; + | ^~~~~ +/build/libminc-2.4.03/libsrc/image_conversion.c:461:32: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] + 461 | icvp->user_keep_aspect = value; + | ^~~~~ +/build/libminc-2.4.03/libsrc/image_conversion.c:475:38: warning: conversion from 'double' to 'long int' may change value [-Wfloat-conversion] + 475 | icvp->user_dim_size[idim] = value; + | ^~~~~ +/build/libminc-2.4.03/libsrc/image_conversion.c: In function 'miicv_inqint': +/build/libminc-2.4.03/libsrc/image_conversion.c:774:13: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] + 774 | *value = dvalue; + | ^~~~~~ +/build/libminc-2.4.03/libsrc/image_conversion.c: In function 'miicv_inqlong': +/build/libminc-2.4.03/libsrc/image_conversion.c:803:13: warning: conversion from 'double' to 'long int' may change value [-Wfloat-conversion] + 803 | *value = dvalue; + | ^~~~~~ +In file included from /build/libminc-2.4.03/libsrc/minc_private.h:84, + from /build/libminc-2.4.03/libsrc/image_conversion.c:173: +/build/libminc-2.4.03/libsrc/image_conversion.c: In function 'MI_icv_zero_buffer': +/build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'unsigned char' may change value [-Wfloat-conversion] + 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) + | ^ +/build/libminc-2.4.03/libsrc/minc_basic.h:161:37: note: in expansion of macro 'ROUND' + 161 | *((unsigned char *) ptr) = ROUND(dvalue); \ + | ^~~~~ +/build/libminc-2.4.03/libsrc/image_conversion.c:1490:5: note: in expansion of macro 'MI_FROM_DOUBLE' + 1490 | {MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)} + | ^~~~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'signed char' may change value [-Wfloat-conversion] + 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) + | ^ +/build/libminc-2.4.03/libsrc/minc_basic.h:166:35: note: in expansion of macro 'ROUND' + 166 | *((signed char *) ptr) = ROUND(dvalue); \ + | ^~~~~ +/build/libminc-2.4.03/libsrc/image_conversion.c:1490:5: note: in expansion of macro 'MI_FROM_DOUBLE' + 1490 | {MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)} + | ^~~~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'short unsigned int' may change value [-Wfloat-conversion] + 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) + | ^ +/build/libminc-2.4.03/libsrc/minc_basic.h:175:38: note: in expansion of macro 'ROUND' + 175 | *((unsigned short *) ptr) = ROUND(dvalue); \ + | ^~~~~ +/build/libminc-2.4.03/libsrc/image_conversion.c:1490:5: note: in expansion of macro 'MI_FROM_DOUBLE' + 1490 | {MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)} + | ^~~~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'short int' may change value [-Wfloat-conversion] + 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) + | ^ +/build/libminc-2.4.03/libsrc/minc_basic.h:180:36: note: in expansion of macro 'ROUND' + 180 | *((signed short *) ptr) = ROUND(dvalue); \ + | ^~~~~ +/build/libminc-2.4.03/libsrc/image_conversion.c:1490:5: note: in expansion of macro 'MI_FROM_DOUBLE' + 1490 | {MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)} + | ^~~~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'unsigned int' may change value [-Wfloat-conversion] + 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) + | ^ +/build/libminc-2.4.03/libsrc/minc_basic.h:189:36: note: in expansion of macro 'ROUND' + 189 | *((unsigned int *) ptr) = ROUND(dvalue); \ + | ^~~~~ +/build/libminc-2.4.03/libsrc/image_conversion.c:1490:5: note: in expansion of macro 'MI_FROM_DOUBLE' + 1490 | {MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)} + | ^~~~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] + 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) + | ^ +/build/libminc-2.4.03/libsrc/minc_basic.h:194:34: note: in expansion of macro 'ROUND' + 194 | *((signed int *) ptr) = ROUND(dvalue); \ + | ^~~~~ +/build/libminc-2.4.03/libsrc/image_conversion.c:1490:5: note: in expansion of macro 'MI_FROM_DOUBLE' + 1490 | {MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)} + | ^~~~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc/minc_useful.h:123:23: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] + 123 | #define MIN( x, y ) ( ((x) <= (y)) ? (x) : (y) ) + | ^ +/build/libminc-2.4.03/libsrc/minc_basic.h:200:26: note: in expansion of macro 'MIN' + 200 | *((float *) ptr) = MIN(FLT_MAX,dvalue); \ + | ^~~ +/build/libminc-2.4.03/libsrc/image_conversion.c:1490:5: note: in expansion of macro 'MI_FROM_DOUBLE' + 1490 | {MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)} + | ^~~~~~~~~~~~~~ /build/libminc-2.4.03/libsrc/minc_convenience.c: In function 'miset_valid_range': /build/libminc-2.4.03/libsrc/minc_convenience.c:430:17: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] 430 | fval[0] = valid_range[0]; @@ -1850,82 +1919,12 @@ /build/libminc-2.4.03/libsrc/minc_convenience.c:1378:30: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 1378 | att_val = malloc(att_len + strlen(tm_stamp) + 2); | ^ -/build/libminc-2.4.03/libsrc2/label.c: In function 'miswap4': -/build/libminc-2.4.03/libsrc2/label.c:40:12: warning: conversion to 'int' from 'unsigned int' may change the sign of the result [-Wsign-conversion] - 40 | return (tmp); - | ^ -/build/libminc-2.4.03/libsrc2/label.c: In function 'miget_label_value_by_index': -/build/libminc-2.4.03/libsrc2/label.c:199:51: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - 199 | result = H5Tget_member_value(volume->mtype_id,idx,value); - | ^~~ -[ 13%] Building C object CMakeFiles/minc2_static.dir/libsrc2/m2util.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc2/m2util.c.o -c /build/libminc-2.4.03/libsrc2/m2util.c -/build/libminc-2.4.03/libsrc2/m2util.c: In function 'midownsample_slice': -/build/libminc-2.4.03/libsrc2/m2util.c:1491:18: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 1491 | x1 = x; - | ^ -/build/libminc-2.4.03/libsrc2/m2util.c:1492:26: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 1492 | y1 = y + ( j * scale ); - | ^ -/build/libminc-2.4.03/libsrc2/m2util.c:1492:20: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 1492 | y1 = y + ( j * scale ); - | ^ -/build/libminc-2.4.03/libsrc2/m2util.c:1492:18: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'size_t' {aka 'unsigned int'} may change value [-Wconversion] - 1492 | y1 = y + ( j * scale ); - | ^ -/build/libminc-2.4.03/libsrc2/m2util.c:1493:26: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 1493 | z1 = z + ( k * scale ); - | ^ -/build/libminc-2.4.03/libsrc2/m2util.c:1493:20: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 1493 | z1 = z + ( k * scale ); - | ^ -/build/libminc-2.4.03/libsrc2/m2util.c:1493:18: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'size_t' {aka 'unsigned int'} may change value [-Wconversion] - 1493 | z1 = z + ( k * scale ); - | ^ -/build/libminc-2.4.03/libsrc2/m2util.c: In function 'miconvert_hyperslab_to_real': -/build/libminc-2.4.03/libsrc2/m2util.c:1602:46: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 1602 | r = miget_slice_range ( volume, pos, volume->number_of_dims, - | ~~~~~~^~~~~~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc2/m2util.c:1627:52: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 1627 | r = miget_slice_range ( volume, pos, volume->number_of_dims, - | ~~~~~~^~~~~~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc2/m2util.c: In function 'minc_update_thumbnail': -/build/libminc-2.4.03/libsrc2/m2util.c:1719:25: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 1719 | osize[i] = isize[i] / scale; - | ^ -/build/libminc-2.4.03/libsrc2/m2util.c:1779:20: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 1779 | in_bytes = scale * isize[1] * isize[2] * sizeof ( double ); - | ^ -/build/libminc-2.4.03/libsrc2/m2util.c:1779:14: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'size_t' {aka 'unsigned int'} may change value [-Wconversion] - 1779 | in_bytes = scale * isize[1] * isize[2] * sizeof ( double ); - | ^~~~~ -/build/libminc-2.4.03/libsrc2/m2util.c:1782:15: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'size_t' {aka 'unsigned int'} may change value [-Wconversion] - 1782 | out_bytes = osize[1] * osize[2] * sizeof ( double ); - | ^~~~~ -/build/libminc-2.4.03/libsrc2/m2util.c:1785:14: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 1785 | count[0] = scale; - | ^~~~~ -/build/libminc-2.4.03/libsrc2/m2util.c:1800:22: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 1800 | start[0] = slice * scale; - | ^ -/build/libminc-2.4.03/libsrc2/m2util.c:1803:16: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 1803 | count[0] = scale; - | ^~~~~ -/build/libminc-2.4.03/libsrc2/m2util.c: In function 'alloc1d': -/build/libminc-2.4.03/libsrc2/m2util.c:1914:52: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - 1914 | return ( ( double * ) malloc ( sizeof ( double ) * n ) ); - | ^ -/build/libminc-2.4.03/libsrc2/m2util.c: In function 'alloc2d': -/build/libminc-2.4.03/libsrc2/m2util.c:1923:34: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - 1923 | mat = ( double ** ) malloc ( n * sizeof ( double * ) ); - | ^ -/build/libminc-2.4.03/libsrc2/m2util.c:1930:38: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - 1930 | mat[i] = ( double * ) malloc ( m * sizeof ( double ) ); - | ^ [ 14%] Building C object CMakeFiles/minc2.dir/libsrc/nd_loop.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc/nd_loop.c.o -c /build/libminc-2.4.03/libsrc/nd_loop.c [ 14%] Building C object CMakeFiles/minc2.dir/libsrc/netcdf_convenience.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc/netcdf_convenience.c.o -c /build/libminc-2.4.03/libsrc/netcdf_convenience.c +[ 14%] Building C object CMakeFiles/minc2_static.dir/libsrc2/label.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc2/label.c.o -c /build/libminc-2.4.03/libsrc2/label.c [ 15%] Building C object CMakeFiles/minc2.dir/libsrc/value_conversion.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc/value_conversion.c.o -c /build/libminc-2.4.03/libsrc/value_conversion.c In file included from /build/libminc-2.4.03/libsrc/minc_private.h:84, @@ -1941,6 +1940,16 @@ /build/libminc-2.4.03/libsrc/netcdf_convenience.c:1033:38: warning: conversion to 'int' from 'size_t' {aka 'unsigned int'} may change the sign of the result [-Wsign-conversion] 1033 | strlen(value) + 1, value); | ~~~~~~~~~~~~~~^~~ +[ 15%] Building C object CMakeFiles/minc2.dir/libsrc/voxel_loop.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc/voxel_loop.c.o -c /build/libminc-2.4.03/libsrc/voxel_loop.c +/build/libminc-2.4.03/libsrc2/label.c: In function 'miswap4': +/build/libminc-2.4.03/libsrc2/label.c:40:12: warning: conversion to 'int' from 'unsigned int' may change the sign of the result [-Wsign-conversion] + 40 | return (tmp); + | ^ +/build/libminc-2.4.03/libsrc2/label.c: In function 'miget_label_value_by_index': +/build/libminc-2.4.03/libsrc2/label.c:199:51: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + 199 | result = H5Tget_member_value(volume->mtype_id,idx,value); + | ^~~ /build/libminc-2.4.03/libsrc/value_conversion.c: In function 'MI_convert_type': /build/libminc-2.4.03/libsrc/value_conversion.c:622:49: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 622 | (size_t) number_of_values*inincr); @@ -2010,8 +2019,6 @@ /build/libminc-2.4.03/libsrc/value_conversion.c:645:11: note: in expansion of macro 'MI_FROM_DOUBLE' 645 | {MI_FROM_DOUBLE(dvalue, outtype, outsgn, outptr)} | ^~~~~~~~~~~~~~ -[ 15%] Building C object CMakeFiles/minc2.dir/libsrc/voxel_loop.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc/voxel_loop.c.o -c /build/libminc-2.4.03/libsrc/voxel_loop.c /build/libminc-2.4.03/libsrc/voxel_loop.c: In function 'update_history': /build/libminc-2.4.03/libsrc/voxel_loop.c:1182:15: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 1182 | att_length += strlen(arg_string) + 1; @@ -2019,6 +2026,70 @@ /build/libminc-2.4.03/libsrc/voxel_loop.c:1182:18: warning: conversion to 'int' from 'size_t' {aka 'unsigned int'} may change the sign of the result [-Wsign-conversion] 1182 | att_length += strlen(arg_string) + 1; | ^~~~~~ +[ 15%] Building C object CMakeFiles/minc2_static.dir/libsrc2/m2util.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc2/m2util.c.o -c /build/libminc-2.4.03/libsrc2/m2util.c +/build/libminc-2.4.03/libsrc2/m2util.c: In function 'midownsample_slice': +/build/libminc-2.4.03/libsrc2/m2util.c:1491:18: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 1491 | x1 = x; + | ^ +/build/libminc-2.4.03/libsrc2/m2util.c:1492:26: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 1492 | y1 = y + ( j * scale ); + | ^ +/build/libminc-2.4.03/libsrc2/m2util.c:1492:20: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 1492 | y1 = y + ( j * scale ); + | ^ +/build/libminc-2.4.03/libsrc2/m2util.c:1492:18: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'size_t' {aka 'unsigned int'} may change value [-Wconversion] + 1492 | y1 = y + ( j * scale ); + | ^ +/build/libminc-2.4.03/libsrc2/m2util.c:1493:26: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 1493 | z1 = z + ( k * scale ); + | ^ +/build/libminc-2.4.03/libsrc2/m2util.c:1493:20: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 1493 | z1 = z + ( k * scale ); + | ^ +/build/libminc-2.4.03/libsrc2/m2util.c:1493:18: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'size_t' {aka 'unsigned int'} may change value [-Wconversion] + 1493 | z1 = z + ( k * scale ); + | ^ +/build/libminc-2.4.03/libsrc2/m2util.c: In function 'miconvert_hyperslab_to_real': +/build/libminc-2.4.03/libsrc2/m2util.c:1602:46: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 1602 | r = miget_slice_range ( volume, pos, volume->number_of_dims, + | ~~~~~~^~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc2/m2util.c:1627:52: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 1627 | r = miget_slice_range ( volume, pos, volume->number_of_dims, + | ~~~~~~^~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc2/m2util.c: In function 'minc_update_thumbnail': +/build/libminc-2.4.03/libsrc2/m2util.c:1719:25: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 1719 | osize[i] = isize[i] / scale; + | ^ +/build/libminc-2.4.03/libsrc2/m2util.c:1779:20: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 1779 | in_bytes = scale * isize[1] * isize[2] * sizeof ( double ); + | ^ +/build/libminc-2.4.03/libsrc2/m2util.c:1779:14: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'size_t' {aka 'unsigned int'} may change value [-Wconversion] + 1779 | in_bytes = scale * isize[1] * isize[2] * sizeof ( double ); + | ^~~~~ +/build/libminc-2.4.03/libsrc2/m2util.c:1782:15: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'size_t' {aka 'unsigned int'} may change value [-Wconversion] + 1782 | out_bytes = osize[1] * osize[2] * sizeof ( double ); + | ^~~~~ +/build/libminc-2.4.03/libsrc2/m2util.c:1785:14: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 1785 | count[0] = scale; + | ^~~~~ +/build/libminc-2.4.03/libsrc2/m2util.c:1800:22: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 1800 | start[0] = slice * scale; + | ^ +/build/libminc-2.4.03/libsrc2/m2util.c:1803:16: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 1803 | count[0] = scale; + | ^~~~~ +/build/libminc-2.4.03/libsrc2/m2util.c: In function 'alloc1d': +/build/libminc-2.4.03/libsrc2/m2util.c:1914:52: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + 1914 | return ( ( double * ) malloc ( sizeof ( double ) * n ) ); + | ^ +/build/libminc-2.4.03/libsrc2/m2util.c: In function 'alloc2d': +/build/libminc-2.4.03/libsrc2/m2util.c:1923:34: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + 1923 | mat = ( double ** ) malloc ( n * sizeof ( double * ) ); + | ^ +/build/libminc-2.4.03/libsrc2/m2util.c:1930:38: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + 1930 | mat[i] = ( double * ) malloc ( m * sizeof ( double ) ); + | ^ [ 16%] Building C object CMakeFiles/minc2.dir/libsrc/hdf_convenience.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc/hdf_convenience.c.o -c /build/libminc-2.4.03/libsrc/hdf_convenience.c /build/libminc-2.4.03/libsrc/hdf_convenience.c: In function 'hdf_var_add': @@ -2172,32 +2243,12 @@ | ^~~~~ [ 16%] Building C object CMakeFiles/minc2.dir/libsrc/minc_compat.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc/minc_compat.c.o -c /build/libminc-2.4.03/libsrc/minc_compat.c -[ 17%] Building C object CMakeFiles/minc2_static.dir/libsrc2/record.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc2/record.c.o -c /build/libminc-2.4.03/libsrc2/record.c /build/libminc-2.4.03/libsrc/minc_compat.c: In function 'MI2attcopy': /build/libminc-2.4.03/libsrc/minc_compat.c:307:51: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 307 | val_ptr = malloc(MI2typelen(att_type) * att_length); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc2/record.c: In function 'miget_record_field_name': -/build/libminc-2.4.03/libsrc2/record.c:57:50: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - 57 | *name = H5Tget_member_name(volume->ftype_id, index); - | ^~~~~ -/build/libminc-2.4.03/libsrc2/record.c: In function 'miset_record_field_name': -/build/libminc-2.4.03/libsrc2/record.c:91:20: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 91 | offset = index * H5Tget_size(ftype_id); - | ^ -[ 17%] Building C object CMakeFiles/minc2_static.dir/libsrc2/slice.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc2/slice.c.o -c /build/libminc-2.4.03/libsrc2/slice.c -/build/libminc-2.4.03/libsrc2/slice.c: In function 'mirw_slice_minmax': -/build/libminc-2.4.03/libsrc2/slice.c:72:11: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 72 | ndims = H5Sget_simple_extent_ndims ( fspc_id ); - | ^~~~~~~~~~~~~~~~~~~~~~~~~~ -[ 17%] Building C object CMakeFiles/minc2.dir/libsrc/minc_simple.c.o +[ 16%] Building C object CMakeFiles/minc2.dir/libsrc/minc_simple.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc/minc_simple.c.o -c /build/libminc-2.4.03/libsrc/minc_simple.c -[ 18%] Building C object CMakeFiles/minc2_static.dir/libsrc2/valid.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc2/valid.c.o -c /build/libminc-2.4.03/libsrc2/valid.c -[ 18%] Building C object CMakeFiles/minc2_static.dir/libsrc2/volprops.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc2/volprops.c.o -c /build/libminc-2.4.03/libsrc2/volprops.c /build/libminc-2.4.03/libsrc/minc_simple.c: In function 'minc_load_data': /build/libminc-2.4.03/libsrc/minc_simple.c:393:27: warning: conversion to 'size_t' {aka 'unsigned int'} from 'long int' may change the sign of the result [-Wsign-conversion] 393 | ucount[j++] = dim_len[i]; @@ -2228,8 +2279,42 @@ /build/libminc-2.4.03/libsrc/minc_simple.c:462:52: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 462 | p_att->att_val = malloc(p_att->att_len * nctypelen(p_att->att_type)); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -[ 19%] Building C object CMakeFiles/minc2_static.dir/libsrc2/volume.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc2/volume.c.o -c /build/libminc-2.4.03/libsrc2/volume.c +[ 17%] Building C object CMakeFiles/minc2_static.dir/libsrc2/record.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc2/record.c.o -c /build/libminc-2.4.03/libsrc2/record.c +[ 18%] Building C object CMakeFiles/minc2.dir/libsrc/minc_format_convert.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc/minc_format_convert.c.o -c /build/libminc-2.4.03/libsrc/minc_format_convert.c +/build/libminc-2.4.03/libsrc2/record.c: In function 'miget_record_field_name': +/build/libminc-2.4.03/libsrc2/record.c:57:50: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + 57 | *name = H5Tget_member_name(volume->ftype_id, index); + | ^~~~~ +/build/libminc-2.4.03/libsrc2/record.c: In function 'miset_record_field_name': +/build/libminc-2.4.03/libsrc2/record.c:91:20: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 91 | offset = index * H5Tget_size(ftype_id); + | ^ +[ 18%] Building C object CMakeFiles/minc2.dir/volume_io/Geometry/colour.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Geometry/colour.c.o -c /build/libminc-2.4.03/volume_io/Geometry/colour.c +[ 18%] Building C object CMakeFiles/minc2_static.dir/libsrc2/slice.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc2/slice.c.o -c /build/libminc-2.4.03/libsrc2/slice.c +[ 19%] Building C object CMakeFiles/minc2.dir/volume_io/Geometry/colour_def.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Geometry/colour_def.c.o -c /build/libminc-2.4.03/volume_io/Geometry/colour_def.c +/build/libminc-2.4.03/libsrc2/slice.c: In function 'mirw_slice_minmax': +/build/libminc-2.4.03/libsrc2/slice.c:72:11: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 72 | ndims = H5Sget_simple_extent_ndims ( fspc_id ); + | ^~~~~~~~~~~~~~~~~~~~~~~~~~ +[ 19%] Building C object CMakeFiles/minc2.dir/volume_io/Geometry/gaussian.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Geometry/gaussian.c.o -c /build/libminc-2.4.03/volume_io/Geometry/gaussian.c +[ 20%] Building C object CMakeFiles/minc2.dir/volume_io/Geometry/inverse.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Geometry/inverse.c.o -c /build/libminc-2.4.03/volume_io/Geometry/inverse.c +[ 21%] Building C object CMakeFiles/minc2_static.dir/libsrc2/valid.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc2/valid.c.o -c /build/libminc-2.4.03/libsrc2/valid.c +[ 21%] Building C object CMakeFiles/minc2.dir/volume_io/Geometry/newton.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Geometry/newton.c.o -c /build/libminc-2.4.03/volume_io/Geometry/newton.c +[ 21%] Building C object CMakeFiles/minc2.dir/volume_io/Geometry/points.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Geometry/points.c.o -c /build/libminc-2.4.03/volume_io/Geometry/points.c +[ 21%] Building C object CMakeFiles/minc2_static.dir/libsrc2/volprops.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc2/volprops.c.o -c /build/libminc-2.4.03/libsrc2/volprops.c +[ 22%] Building C object CMakeFiles/minc2.dir/volume_io/Geometry/splines.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Geometry/splines.c.o -c /build/libminc-2.4.03/volume_io/Geometry/splines.c /build/libminc-2.4.03/libsrc2/volprops.c: In function 'miget_volume_props': /build/libminc-2.4.03/libsrc2/volprops.c:133:60: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 133 | handle->edge_lengths = (int *)malloc(handle->edge_count*sizeof(int)); @@ -2247,6 +2332,24 @@ /build/libminc-2.4.03/libsrc2/volprops.c:432:52: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 432 | props->edge_lengths = (int *) malloc(edge_count*sizeof(int)); | ^ +[ 22%] Building C object CMakeFiles/minc2.dir/volume_io/Geometry/tensors.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Geometry/tensors.c.o -c /build/libminc-2.4.03/volume_io/Geometry/tensors.c +[ 23%] Building C object CMakeFiles/minc2.dir/volume_io/Geometry/transforms.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Geometry/transforms.c.o -c /build/libminc-2.4.03/volume_io/Geometry/transforms.c +[ 23%] Building C object CMakeFiles/minc2.dir/volume_io/MNI_formats/gen_xf_io.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/MNI_formats/gen_xf_io.c.o -c /build/libminc-2.4.03/volume_io/MNI_formats/gen_xf_io.c +[ 24%] Building C object CMakeFiles/minc2_static.dir/libsrc2/volume.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc2/volume.c.o -c /build/libminc-2.4.03/libsrc2/volume.c +/build/libminc-2.4.03/volume_io/MNI_formats/gen_xf_io.c: In function 'output_one_transform': +/build/libminc-2.4.03/volume_io/MNI_formats/gen_xf_io.c:184:74: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 184 | volume_filename = alloc_string( string_length(prefix_filename) + + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ + 185 | 100 ); + | ~~~ +[ 25%] Building C object CMakeFiles/minc2.dir/volume_io/MNI_formats/gen_xfs.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/MNI_formats/gen_xfs.c.o -c /build/libminc-2.4.03/volume_io/MNI_formats/gen_xfs.c +[ 25%] Building C object CMakeFiles/minc2_static.dir/libcommon/minc2_error.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libcommon/minc2_error.c.o -c /build/libminc-2.4.03/libcommon/minc2_error.c /build/libminc-2.4.03/libsrc2/volume.c: In function '_hdf_open': /build/libminc-2.4.03/libsrc2/volume.c:120:117: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 120 | H5Pset_cache(prp_id, 0, 2503, miget_cfg_present(MICFG_MINC_FILE_CACHE)?miget_cfg_int(MICFG_MINC_FILE_CACHE)*100000:_MI1_MAX_VAR_BUFFER_SIZE*10, 1.0); @@ -2318,21 +2421,17 @@ /build/libminc-2.4.03/libsrc2/volume.c:1511:59: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 1511 | char *tmp_nm = H5Tget_member_name(handle->ftype_id, i); | ^ -[ 19%] Building C object CMakeFiles/minc2_static.dir/libcommon/minc2_error.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libcommon/minc2_error.c.o -c /build/libminc-2.4.03/libcommon/minc2_error.c -[ 19%] Building C object CMakeFiles/minc2_static.dir/libcommon/minc_config.c.o +[ 25%] Building C object CMakeFiles/minc2_static.dir/libcommon/minc_config.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libcommon/minc_config.c.o -c /build/libminc-2.4.03/libcommon/minc_config.c /build/libminc-2.4.03/libcommon/minc_config.c: In function 'miread_cfg': /build/libminc-2.4.03/libcommon/minc_config.c:84:42: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 84 | strncpy(buffer, tmp, maxlen); | ^~~~~~ -[ 20%] Building C object CMakeFiles/minc2_static.dir/libcommon/minc_error.c.o +[ 26%] Building C object CMakeFiles/minc2_static.dir/libcommon/minc_error.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libcommon/minc_error.c.o -c /build/libminc-2.4.03/libcommon/minc_error.c -[ 21%] Building C object CMakeFiles/minc2.dir/libsrc/minc_format_convert.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/libsrc/minc_format_convert.c.o -c /build/libminc-2.4.03/libsrc/minc_format_convert.c -[ 21%] Building C object CMakeFiles/minc2.dir/volume_io/Geometry/colour.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Geometry/colour.c.o -c /build/libminc-2.4.03/volume_io/Geometry/colour.c -[ 21%] Building C object CMakeFiles/minc2_static.dir/libcommon/ParseArgv.c.o +[ 26%] Building C object CMakeFiles/minc2.dir/volume_io/MNI_formats/grid_transforms.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/MNI_formats/grid_transforms.c.o -c /build/libminc-2.4.03/volume_io/MNI_formats/grid_transforms.c +[ 26%] Building C object CMakeFiles/minc2_static.dir/libcommon/ParseArgv.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libcommon/ParseArgv.c.o -c /build/libminc-2.4.03/libcommon/ParseArgv.c /build/libminc-2.4.03/libcommon/ParseArgv.c: In function 'PrintUsage': /build/libminc-2.4.03/libcommon/ParseArgv.c:439:32: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] @@ -2341,8 +2440,8 @@ /build/libminc-2.4.03/libcommon/ParseArgv.c:439:22: warning: conversion to 'int' from 'size_t' {aka 'unsigned int'} may change the sign of the result [-Wsign-conversion] 439 | numSpaces = width + 1 - strlen(infoPtr->key); | ^~~~~ -[ 22%] Building C object CMakeFiles/minc2.dir/volume_io/Geometry/colour_def.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Geometry/colour_def.c.o -c /build/libminc-2.4.03/volume_io/Geometry/colour_def.c +[ 27%] Building C object CMakeFiles/minc2.dir/volume_io/MNI_formats/mni_io.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/MNI_formats/mni_io.c.o -c /build/libminc-2.4.03/volume_io/MNI_formats/mni_io.c In file included from /build/libminc-2.4.03/libsrc2/volume.c:33: /build/libminc-2.4.03/libsrc2/minc2_private.h:14:22: warning: '%s' directive writing up to 127 bytes into a region of size 107 [-Wformat-overflow=] 14 | #define MI_ROOT_PATH "/minc-2.0" @@ -2362,13 +2461,11 @@ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 37 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -[ 22%] Building C object CMakeFiles/minc2.dir/volume_io/Geometry/gaussian.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Geometry/gaussian.c.o -c /build/libminc-2.4.03/volume_io/Geometry/gaussian.c -[ 23%] Building C object CMakeFiles/minc2.dir/volume_io/Geometry/inverse.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf 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-Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Geometry/newton.c.o -c /build/libminc-2.4.03/volume_io/Geometry/newton.c -[ 24%] Building C object CMakeFiles/minc2_static.dir/libcommon/read_file_names.c.o +[ 27%] Building C object CMakeFiles/minc2.dir/volume_io/MNI_formats/tag_points.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/MNI_formats/tag_points.c.o -c /build/libminc-2.4.03/volume_io/MNI_formats/tag_points.c +[ 27%] Building C object CMakeFiles/minc2.dir/volume_io/MNI_formats/thin_plate_spline.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/MNI_formats/thin_plate_spline.c.o -c /build/libminc-2.4.03/volume_io/MNI_formats/thin_plate_spline.c +[ 28%] Building C object CMakeFiles/minc2_static.dir/libcommon/read_file_names.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libcommon/read_file_names.c.o -c /build/libminc-2.4.03/libcommon/read_file_names.c /build/libminc-2.4.03/libcommon/read_file_names.c: In function 'read_file_names': /build/libminc-2.4.03/libcommon/read_file_names.c:53:34: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] @@ -2377,9 +2474,7 @@ /build/libminc-2.4.03/libcommon/read_file_names.c:76:48: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 76 | files = realloc(files, sizeof(*files) * array_size); | ^ -[ 24%] Building C object CMakeFiles/minc2.dir/volume_io/Geometry/points.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Geometry/points.c.o -c /build/libminc-2.4.03/volume_io/Geometry/points.c -[ 24%] Building C object CMakeFiles/minc2_static.dir/libcommon/restructure.c.o +[ 28%] Building C object CMakeFiles/minc2_static.dir/libcommon/restructure.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libcommon/restructure.c.o -c /build/libminc-2.4.03/libcommon/restructure.c /build/libminc-2.4.03/libcommon/restructure.c: In function 'restructure_array': /build/libminc-2.4.03/libcommon/restructure.c:134:21: warning: unsigned conversion from 'int' to 'size_t' {aka 'unsigned int'} changes value from '-1' to '4294967295' [-Wsign-conversion] @@ -2397,26 +2492,14 @@ /build/libminc-2.4.03/libcommon/restructure.c:204:11: note: in expansion of macro 'BIT_SET' 204 | BIT_SET(bitmap, offset_next); | ^~~~~~~ -[ 25%] Building C object CMakeFiles/minc2.dir/volume_io/Geometry/splines.c.o -/usr/bin/cc -DHAVE_CONFIG_H 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/build/libminc-2.4.03/volume_io/Geometry/transforms.c -[ 27%] Building C object CMakeFiles/minc2_static.dir/libcommon/time_stamp.c.o +[ 29%] Building C object CMakeFiles/minc2_static.dir/libcommon/time_stamp.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libcommon/time_stamp.c.o -c /build/libminc-2.4.03/libcommon/time_stamp.c -[ 27%] Building C object CMakeFiles/minc2_static.dir/libsrc/dim_conversion.c.o +[ 29%] Building C object CMakeFiles/minc2_static.dir/libsrc/dim_conversion.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc/dim_conversion.c.o -c /build/libminc-2.4.03/libsrc/dim_conversion.c -[ 27%] Building C object CMakeFiles/minc2.dir/volume_io/MNI_formats/gen_xf_io.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/MNI_formats/gen_xf_io.c.o -c /build/libminc-2.4.03/volume_io/MNI_formats/gen_xf_io.c -[ 28%] Building C object CMakeFiles/minc2_static.dir/libsrc/image_conversion.c.o +[ 30%] Building C object CMakeFiles/minc2.dir/volume_io/Prog_utils/alloc.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Prog_utils/alloc.c.o -c /build/libminc-2.4.03/volume_io/Prog_utils/alloc.c +[ 31%] Building C object CMakeFiles/minc2_static.dir/libsrc/image_conversion.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc/image_conversion.c.o -c /build/libminc-2.4.03/libsrc/image_conversion.c -/build/libminc-2.4.03/volume_io/MNI_formats/gen_xf_io.c: In function 'output_one_transform': -/build/libminc-2.4.03/volume_io/MNI_formats/gen_xf_io.c:184:74: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 184 | volume_filename = alloc_string( string_length(prefix_filename) + - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ - 185 | 100 ); - | ~~~ In file included from /build/libminc-2.4.03/libsrc/minc_private.h:84, from /build/libminc-2.4.03/libsrc/dim_conversion.c:93: /build/libminc-2.4.03/libsrc/dim_conversion.c: In function 'MI_icv_dimconvert': @@ -2483,6 +2566,7 @@ /build/libminc-2.4.03/libsrc/dim_conversion.c:726:11: note: in expansion of macro 'MI_FROM_DOUBLE' 726 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, optr)} | ^~~~~~~~~~~~~~ +/build/libminc-2.4.03/volume_io/Prog_utils/alloc.c: In function 'alloc_memory_in_bytes': /build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'unsigned char' may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ @@ -2492,6 +2576,13 @@ /build/libminc-2.4.03/libsrc/dim_conversion.c:734:17: note: in expansion of macro 'MI_FROM_DOUBLE' 734 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, ptr)} | ^~~~~~~~~~~~~~ +/build/libminc-2.4.03/volume_io/Prog_utils/alloc.c:247:50: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'size_t' {aka 'unsigned int'} [-Wformat=] + 247 | print_error( "Cannot alloc 1D array of %lu bytes.\n", n_bytes ); + | ~~^ ~~~~~~~ + | | | + | | size_t {aka unsigned int} + | long unsigned int + | %u /build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'signed char' may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ @@ -2501,188 +2592,6 @@ /build/libminc-2.4.03/libsrc/dim_conversion.c:734:17: note: in expansion of macro 'MI_FROM_DOUBLE' 734 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, ptr)} | ^~~~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'short unsigned int' may change value [-Wfloat-conversion] - 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) - | ^ -/build/libminc-2.4.03/libsrc/minc_basic.h:175:38: note: in expansion of macro 'ROUND' - 175 | *((unsigned short *) ptr) = ROUND(dvalue); \ - | ^~~~~ -/build/libminc-2.4.03/libsrc/dim_conversion.c:734:17: note: in expansion of macro 'MI_FROM_DOUBLE' - 734 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, ptr)} - | ^~~~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'short int' may change value [-Wfloat-conversion] - 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) - | ^ -/build/libminc-2.4.03/libsrc/minc_basic.h:180:36: note: in expansion of macro 'ROUND' - 180 | *((signed short *) ptr) = ROUND(dvalue); \ - | ^~~~~ -/build/libminc-2.4.03/libsrc/dim_conversion.c:734:17: note: in expansion of macro 'MI_FROM_DOUBLE' - 734 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, ptr)} - | ^~~~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'unsigned int' may change value [-Wfloat-conversion] - 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) - | ^ -/build/libminc-2.4.03/libsrc/minc_basic.h:189:36: note: in expansion of macro 'ROUND' - 189 | *((unsigned int *) ptr) = ROUND(dvalue); \ - | ^~~~~ -/build/libminc-2.4.03/libsrc/dim_conversion.c:734:17: note: in expansion of macro 'MI_FROM_DOUBLE' - 734 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, ptr)} - | ^~~~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] - 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) - | ^ -/build/libminc-2.4.03/libsrc/minc_basic.h:194:34: note: in expansion of macro 'ROUND' - 194 | *((signed int *) ptr) = ROUND(dvalue); \ - | ^~~~~ -/build/libminc-2.4.03/libsrc/dim_conversion.c:734:17: note: in expansion of macro 'MI_FROM_DOUBLE' - 734 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, ptr)} - | ^~~~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc/minc_useful.h:123:23: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] - 123 | #define MIN( x, y ) ( ((x) <= (y)) ? (x) : (y) ) - | ^ -/build/libminc-2.4.03/libsrc/minc_basic.h:200:26: note: in expansion of macro 'MIN' - 200 | *((float *) ptr) = MIN(FLT_MAX,dvalue); \ - | ^~~ -/build/libminc-2.4.03/libsrc/dim_conversion.c:734:17: note: in expansion of macro 'MI_FROM_DOUBLE' - 734 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, ptr)} - | ^~~~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc/image_conversion.c: In function 'miicv_setdbl': -/build/libminc-2.4.03/libsrc/image_conversion.c:399:29: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] - 399 | icvp->user_do_range = value; - | ^~~~~ -/build/libminc-2.4.03/libsrc/image_conversion.c:408:28: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] - 408 | icvp->user_do_norm = value; - | ^~~~~ -/build/libminc-2.4.03/libsrc/image_conversion.c:411:30: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] - 411 | icvp->user_user_norm = value; - | ^~~~~ -/build/libminc-2.4.03/libsrc/image_conversion.c:420:33: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] - 420 | icvp->user_do_fillvalue = value; - | ^~~~~ -/build/libminc-2.4.03/libsrc/image_conversion.c:426:31: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] - 426 | icvp->user_do_dimconv = value; - | ^~~~~ -/build/libminc-2.4.03/libsrc/image_conversion.c:429:30: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] - 429 | icvp->user_do_scalar = value; - | ^~~~~ -/build/libminc-2.4.03/libsrc/image_conversion.c:432:14: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] - 432 | ival = value; - | ^~~~~ -/build/libminc-2.4.03/libsrc/image_conversion.c:437:14: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] - 437 | ival = value; - | ^~~~~ -/build/libminc-2.4.03/libsrc/image_conversion.c:442:14: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] - 442 | ival = value; - | ^~~~~ -/build/libminc-2.4.03/libsrc/image_conversion.c:447:14: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] - 447 | ival = value; - | ^~~~~ -/build/libminc-2.4.03/libsrc/image_conversion.c:455:32: warning: conversion from 'double' to 'long int' may change value [-Wfloat-conversion] - 455 | icvp->user_dim_size[0] = value; - | ^~~~~ -/build/libminc-2.4.03/libsrc/image_conversion.c:458:32: warning: conversion from 'double' to 'long int' may change value [-Wfloat-conversion] - 458 | icvp->user_dim_size[1] = value; - | ^~~~~ -/build/libminc-2.4.03/libsrc/image_conversion.c:461:32: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] - 461 | icvp->user_keep_aspect = value; - | ^~~~~ -/build/libminc-2.4.03/libsrc/image_conversion.c:475:38: warning: conversion from 'double' to 'long int' may change value [-Wfloat-conversion] - 475 | icvp->user_dim_size[idim] = value; - | ^~~~~ -/build/libminc-2.4.03/libsrc/image_conversion.c: In function 'miicv_inqint': -/build/libminc-2.4.03/libsrc/image_conversion.c:774:13: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] - 774 | *value = dvalue; - | ^~~~~~ -/build/libminc-2.4.03/libsrc/image_conversion.c: In function 'miicv_inqlong': -/build/libminc-2.4.03/libsrc/image_conversion.c:803:13: warning: conversion from 'double' to 'long int' may change value [-Wfloat-conversion] - 803 | *value = dvalue; - | ^~~~~~ -In file included from /build/libminc-2.4.03/libsrc/minc_private.h:84, - from /build/libminc-2.4.03/libsrc/image_conversion.c:173: -/build/libminc-2.4.03/libsrc/image_conversion.c: In function 'MI_icv_zero_buffer': -/build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'unsigned char' may change value [-Wfloat-conversion] - 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) - | ^ -/build/libminc-2.4.03/libsrc/minc_basic.h:161:37: note: in expansion of macro 'ROUND' - 161 | *((unsigned char *) ptr) = ROUND(dvalue); \ - | ^~~~~ -/build/libminc-2.4.03/libsrc/image_conversion.c:1490:5: note: in expansion of macro 'MI_FROM_DOUBLE' - 1490 | {MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)} - | ^~~~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'signed char' may change value [-Wfloat-conversion] - 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) - | ^ -/build/libminc-2.4.03/libsrc/minc_basic.h:166:35: note: in expansion of macro 'ROUND' - 166 | *((signed char *) ptr) = ROUND(dvalue); \ - | ^~~~~ -/build/libminc-2.4.03/libsrc/image_conversion.c:1490:5: note: in expansion of macro 'MI_FROM_DOUBLE' - 1490 | {MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)} - | ^~~~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'short unsigned int' may change value [-Wfloat-conversion] - 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) - | ^ -/build/libminc-2.4.03/libsrc/minc_basic.h:175:38: note: in expansion of macro 'ROUND' - 175 | *((unsigned short *) ptr) = ROUND(dvalue); \ - | ^~~~~ -/build/libminc-2.4.03/libsrc/image_conversion.c:1490:5: note: in expansion of macro 'MI_FROM_DOUBLE' - 1490 | {MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)} - | ^~~~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'short int' may change value [-Wfloat-conversion] - 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) - | ^ -/build/libminc-2.4.03/libsrc/minc_basic.h:180:36: note: in expansion of macro 'ROUND' - 180 | *((signed short *) ptr) = ROUND(dvalue); \ - | ^~~~~ -/build/libminc-2.4.03/libsrc/image_conversion.c:1490:5: note: in expansion of macro 'MI_FROM_DOUBLE' - 1490 | {MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)} - | ^~~~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'unsigned int' may change value [-Wfloat-conversion] - 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) - | ^ -/build/libminc-2.4.03/libsrc/minc_basic.h:189:36: note: in expansion of macro 'ROUND' - 189 | *((unsigned int *) ptr) = ROUND(dvalue); \ - | ^~~~~ -/build/libminc-2.4.03/libsrc/image_conversion.c:1490:5: note: in expansion of macro 'MI_FROM_DOUBLE' - 1490 | {MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)} - | ^~~~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] - 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) - | ^ -/build/libminc-2.4.03/libsrc/minc_basic.h:194:34: note: in expansion of macro 'ROUND' - 194 | *((signed int *) ptr) = ROUND(dvalue); \ - | ^~~~~ -/build/libminc-2.4.03/libsrc/image_conversion.c:1490:5: note: in expansion of macro 'MI_FROM_DOUBLE' - 1490 | {MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)} - | ^~~~~~~~~~~~~~ -/build/libminc-2.4.03/libsrc/minc_useful.h:123:23: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] - 123 | #define MIN( x, y ) ( ((x) <= (y)) ? (x) : (y) ) - | ^ -/build/libminc-2.4.03/libsrc/minc_basic.h:200:26: note: in expansion of macro 'MIN' - 200 | *((float *) ptr) = MIN(FLT_MAX,dvalue); \ - | ^~~ -/build/libminc-2.4.03/libsrc/image_conversion.c:1490:5: note: in expansion of macro 'MI_FROM_DOUBLE' - 1490 | {MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)} - | ^~~~~~~~~~~~~~ -[ 29%] Building C object CMakeFiles/minc2.dir/volume_io/MNI_formats/gen_xfs.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/MNI_formats/gen_xfs.c.o -c /build/libminc-2.4.03/volume_io/MNI_formats/gen_xfs.c -[ 29%] Building C object CMakeFiles/minc2.dir/volume_io/MNI_formats/grid_transforms.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/MNI_formats/grid_transforms.c.o -c /build/libminc-2.4.03/volume_io/MNI_formats/grid_transforms.c -[ 30%] Building C object CMakeFiles/minc2.dir/volume_io/MNI_formats/mni_io.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/MNI_formats/mni_io.c.o -c /build/libminc-2.4.03/volume_io/MNI_formats/mni_io.c -[ 30%] Building C object CMakeFiles/minc2.dir/volume_io/MNI_formats/tag_points.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/MNI_formats/tag_points.c.o -c /build/libminc-2.4.03/volume_io/MNI_formats/tag_points.c -[ 30%] Building C object CMakeFiles/minc2.dir/volume_io/MNI_formats/thin_plate_spline.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/MNI_formats/thin_plate_spline.c.o -c /build/libminc-2.4.03/volume_io/MNI_formats/thin_plate_spline.c -[ 31%] Building C object CMakeFiles/minc2.dir/volume_io/Prog_utils/alloc.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Prog_utils/alloc.c.o -c /build/libminc-2.4.03/volume_io/Prog_utils/alloc.c -/build/libminc-2.4.03/volume_io/Prog_utils/alloc.c: In function 'alloc_memory_in_bytes': -/build/libminc-2.4.03/volume_io/Prog_utils/alloc.c:247:50: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'size_t' {aka 'unsigned int'} [-Wformat=] - 247 | print_error( "Cannot alloc 1D array of %lu bytes.\n", n_bytes ); - | ~~^ ~~~~~~~ - | | | - | | size_t {aka unsigned int} - | long unsigned int - | %u /build/libminc-2.4.03/volume_io/Prog_utils/alloc.c: In function 'alloc_memory_1d': /build/libminc-2.4.03/volume_io/Prog_utils/alloc.c:286:50: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'size_t' {aka 'unsigned int'} [-Wformat=] 286 | print_error( "Cannot alloc 1D array of %lu elements of %lu bytes.\n", @@ -2694,6 +2603,15 @@ | ~~~~~~~~~~ | | | size_t {aka unsigned int} +/build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'short unsigned int' may change value [-Wfloat-conversion] + 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) + | ^ +/build/libminc-2.4.03/libsrc/minc_basic.h:175:38: note: in expansion of macro 'ROUND' + 175 | *((unsigned short *) ptr) = ROUND(dvalue); \ + | ^~~~~ +/build/libminc-2.4.03/libsrc/dim_conversion.c:734:17: note: in expansion of macro 'MI_FROM_DOUBLE' + 734 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, ptr)} + | ^~~~~~~~~~~~~~ /build/libminc-2.4.03/volume_io/Prog_utils/alloc.c:286:66: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=] 286 | print_error( "Cannot alloc 1D array of %lu elements of %lu bytes.\n", | ~~^ @@ -2704,6 +2622,15 @@ | ~~~~~~~~~ | | | size_t {aka unsigned int} +/build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'short int' may change value [-Wfloat-conversion] + 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) + | ^ +/build/libminc-2.4.03/libsrc/minc_basic.h:180:36: note: in expansion of macro 'ROUND' + 180 | *((signed short *) ptr) = ROUND(dvalue); \ + | ^~~~~ +/build/libminc-2.4.03/libsrc/dim_conversion.c:734:17: note: in expansion of macro 'MI_FROM_DOUBLE' + 734 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, ptr)} + | ^~~~~~~~~~~~~~ /build/libminc-2.4.03/volume_io/Prog_utils/alloc.c: In function 'alloc_memory_2d': /build/libminc-2.4.03/volume_io/Prog_utils/alloc.c:329:50: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'size_t' {aka 'unsigned int'} [-Wformat=] 329 | print_error( "Cannot alloc 2D array of %lu by %lu elements of %lu bytes.\n", @@ -2715,6 +2642,15 @@ | ~~ | | | size_t {aka unsigned int} +/build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'unsigned int' may change value [-Wfloat-conversion] + 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) + | ^ +/build/libminc-2.4.03/libsrc/minc_basic.h:189:36: note: in expansion of macro 'ROUND' + 189 | *((unsigned int *) ptr) = ROUND(dvalue); \ + | ^~~~~ +/build/libminc-2.4.03/libsrc/dim_conversion.c:734:17: note: in expansion of macro 'MI_FROM_DOUBLE' + 734 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, ptr)} + | ^~~~~~~~~~~~~~ /build/libminc-2.4.03/volume_io/Prog_utils/alloc.c:329:57: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=] 329 | print_error( "Cannot alloc 2D array of %lu by %lu elements of %lu bytes.\n", | ~~^ @@ -2735,7 +2671,25 @@ | ~~~~~~~~~ | | | size_t {aka unsigned int} +/build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] + 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) + | ^ +/build/libminc-2.4.03/libsrc/minc_basic.h:194:34: note: in expansion of macro 'ROUND' + 194 | *((signed int *) ptr) = ROUND(dvalue); \ + | ^~~~~ +/build/libminc-2.4.03/libsrc/dim_conversion.c:734:17: note: in expansion of macro 'MI_FROM_DOUBLE' + 734 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, ptr)} + | ^~~~~~~~~~~~~~ /build/libminc-2.4.03/volume_io/Prog_utils/alloc.c: In function 'alloc_memory_3d': +/build/libminc-2.4.03/libsrc/minc_useful.h:123:23: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] + 123 | #define MIN( x, y ) ( ((x) <= (y)) ? (x) : (y) ) + | ^ +/build/libminc-2.4.03/libsrc/minc_basic.h:200:26: note: in expansion of macro 'MIN' + 200 | *((float *) ptr) = MIN(FLT_MAX,dvalue); \ + | ^~~ +/build/libminc-2.4.03/libsrc/dim_conversion.c:734:17: note: in expansion of macro 'MI_FROM_DOUBLE' + 734 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, ptr)} + | ^~~~~~~~~~~~~~ /build/libminc-2.4.03/volume_io/Prog_utils/alloc.c:377:50: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'size_t' {aka 'unsigned int'} [-Wformat=] 377 | print_error( "Cannot alloc 3D array of %lu by %lu by %lu elements of %lu bytes.\n", | ~~^ @@ -2921,14 +2875,165 @@ | size_t {aka unsigned int} [ 31%] Building C object CMakeFiles/minc2.dir/volume_io/Prog_utils/alloc_check.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Prog_utils/alloc_check.c.o -c /build/libminc-2.4.03/volume_io/Prog_utils/alloc_check.c -[ 31%] Building C object CMakeFiles/minc2_static.dir/libsrc/minc_convenience.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc/minc_convenience.c.o -c /build/libminc-2.4.03/libsrc/minc_convenience.c -[ 31%] Building C object CMakeFiles/minc2_static.dir/libsrc/nd_loop.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc/nd_loop.c.o -c /build/libminc-2.4.03/libsrc/nd_loop.c +/build/libminc-2.4.03/libsrc/image_conversion.c: In function 'miicv_setdbl': +/build/libminc-2.4.03/libsrc/image_conversion.c:399:29: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] + 399 | icvp->user_do_range = value; + | ^~~~~ +/build/libminc-2.4.03/libsrc/image_conversion.c:408:28: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] + 408 | icvp->user_do_norm = value; + | ^~~~~ +/build/libminc-2.4.03/libsrc/image_conversion.c:411:30: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] + 411 | icvp->user_user_norm = value; + | ^~~~~ +/build/libminc-2.4.03/libsrc/image_conversion.c:420:33: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] + 420 | icvp->user_do_fillvalue = value; + | ^~~~~ +/build/libminc-2.4.03/libsrc/image_conversion.c:426:31: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] + 426 | icvp->user_do_dimconv = value; + | ^~~~~ +/build/libminc-2.4.03/libsrc/image_conversion.c:429:30: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] + 429 | icvp->user_do_scalar = value; + | ^~~~~ +/build/libminc-2.4.03/libsrc/image_conversion.c:432:14: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] + 432 | ival = value; + | ^~~~~ +/build/libminc-2.4.03/libsrc/image_conversion.c:437:14: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] + 437 | ival = value; + | ^~~~~ +/build/libminc-2.4.03/libsrc/image_conversion.c:442:14: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] + 442 | ival = value; + | ^~~~~ +/build/libminc-2.4.03/libsrc/image_conversion.c:447:14: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] + 447 | ival = value; + | ^~~~~ +/build/libminc-2.4.03/libsrc/image_conversion.c:455:32: warning: conversion from 'double' to 'long int' may change value [-Wfloat-conversion] + 455 | icvp->user_dim_size[0] = value; + | ^~~~~ +/build/libminc-2.4.03/libsrc/image_conversion.c:458:32: warning: conversion from 'double' to 'long int' may change value [-Wfloat-conversion] + 458 | icvp->user_dim_size[1] = value; + | ^~~~~ +/build/libminc-2.4.03/libsrc/image_conversion.c:461:32: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] + 461 | icvp->user_keep_aspect = value; + | ^~~~~ +/build/libminc-2.4.03/libsrc/image_conversion.c:475:38: warning: conversion from 'double' to 'long int' may change value [-Wfloat-conversion] + 475 | icvp->user_dim_size[idim] = value; + | ^~~~~ +/build/libminc-2.4.03/libsrc/image_conversion.c: In function 'miicv_inqint': +/build/libminc-2.4.03/libsrc/image_conversion.c:774:13: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] + 774 | *value = dvalue; + | ^~~~~~ +/build/libminc-2.4.03/libsrc/image_conversion.c: In function 'miicv_inqlong': +/build/libminc-2.4.03/libsrc/image_conversion.c:803:13: warning: conversion from 'double' to 'long int' may change value [-Wfloat-conversion] + 803 | *value = dvalue; + | ^~~~~~ +In file included from /build/libminc-2.4.03/libsrc/minc_private.h:84, + from /build/libminc-2.4.03/libsrc/image_conversion.c:173: +/build/libminc-2.4.03/libsrc/image_conversion.c: In function 'MI_icv_zero_buffer': +/build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'unsigned char' may change value [-Wfloat-conversion] + 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) + | ^ +/build/libminc-2.4.03/libsrc/minc_basic.h:161:37: note: in expansion of macro 'ROUND' + 161 | *((unsigned char *) ptr) = ROUND(dvalue); \ + | ^~~~~ +/build/libminc-2.4.03/libsrc/image_conversion.c:1490:5: note: in expansion of macro 'MI_FROM_DOUBLE' + 1490 | {MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)} + | ^~~~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'signed char' may change value [-Wfloat-conversion] + 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) + | ^ +/build/libminc-2.4.03/libsrc/minc_basic.h:166:35: note: in expansion of macro 'ROUND' + 166 | *((signed char *) ptr) = ROUND(dvalue); \ + | ^~~~~ +/build/libminc-2.4.03/libsrc/image_conversion.c:1490:5: note: in expansion of macro 'MI_FROM_DOUBLE' + 1490 | {MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)} + | ^~~~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'short unsigned int' may change value [-Wfloat-conversion] + 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) + | ^ +/build/libminc-2.4.03/libsrc/minc_basic.h:175:38: note: in expansion of macro 'ROUND' + 175 | *((unsigned short *) ptr) = ROUND(dvalue); \ + | ^~~~~ +/build/libminc-2.4.03/libsrc/image_conversion.c:1490:5: note: in expansion of macro 'MI_FROM_DOUBLE' + 1490 | {MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)} + | ^~~~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'short int' may change value [-Wfloat-conversion] + 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) + | ^ +/build/libminc-2.4.03/libsrc/minc_basic.h:180:36: note: in expansion of macro 'ROUND' + 180 | *((signed short *) ptr) = ROUND(dvalue); \ + | ^~~~~ +/build/libminc-2.4.03/libsrc/image_conversion.c:1490:5: note: in expansion of macro 'MI_FROM_DOUBLE' + 1490 | {MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)} + | ^~~~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'unsigned int' may change value [-Wfloat-conversion] + 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) + | ^ +/build/libminc-2.4.03/libsrc/minc_basic.h:189:36: note: in expansion of macro 'ROUND' + 189 | *((unsigned int *) ptr) = ROUND(dvalue); \ + | ^~~~~ +/build/libminc-2.4.03/libsrc/image_conversion.c:1490:5: note: in expansion of macro 'MI_FROM_DOUBLE' + 1490 | {MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)} + | ^~~~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] + 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) + | ^ +/build/libminc-2.4.03/libsrc/minc_basic.h:194:34: note: in expansion of macro 'ROUND' + 194 | *((signed int *) ptr) = ROUND(dvalue); \ + | ^~~~~ +/build/libminc-2.4.03/libsrc/image_conversion.c:1490:5: note: in expansion of macro 'MI_FROM_DOUBLE' + 1490 | {MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)} + | ^~~~~~~~~~~~~~ +/build/libminc-2.4.03/libsrc/minc_useful.h:123:23: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] + 123 | #define MIN( x, y ) ( ((x) <= (y)) ? (x) : (y) ) + | ^ +/build/libminc-2.4.03/libsrc/minc_basic.h:200:26: note: in expansion of macro 'MIN' + 200 | *((float *) ptr) = MIN(FLT_MAX,dvalue); \ + | ^~~ +/build/libminc-2.4.03/libsrc/image_conversion.c:1490:5: note: in expansion of macro 'MI_FROM_DOUBLE' + 1490 | {MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)} + | ^~~~~~~~~~~~~~ [ 32%] Building C object CMakeFiles/minc2.dir/volume_io/Prog_utils/arrays.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Prog_utils/arrays.c.o -c /build/libminc-2.4.03/volume_io/Prog_utils/arrays.c -[ 33%] Building C object CMakeFiles/minc2_static.dir/libsrc/netcdf_convenience.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc/netcdf_convenience.c.o -c /build/libminc-2.4.03/libsrc/netcdf_convenience.c +[ 32%] Building C object CMakeFiles/minc2.dir/volume_io/Prog_utils/files.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Prog_utils/files.c.o -c /build/libminc-2.4.03/volume_io/Prog_utils/files.c +/build/libminc-2.4.03/volume_io/Prog_utils/files.c: In function 'extract_directory': +/build/libminc-2.4.03/volume_io/Prog_utils/files.c:1249:35: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 1249 | directory = alloc_string( slash_index ); + | ^~~~~~~~~~~ +/build/libminc-2.4.03/volume_io/Prog_utils/files.c: In function 'input_binary_data': +/build/libminc-2.4.03/volume_io/Prog_utils/files.c:1746:58: warning: format '%ld' expects argument of type 'long int', but argument 4 has type 'size_t' {aka 'unsigned int'} [-Wformat=] + 1746 | print_error( " (%d out of %d items of size %ld). ", n_done, n, + | ~~^ + | | + | long int + | %d + 1747 | element_size ); + | ~~~~~~~~~~~~ + | | + | size_t {aka unsigned int} +/build/libminc-2.4.03/volume_io/Prog_utils/files.c: In function 'output_binary_data': +/build/libminc-2.4.03/volume_io/Prog_utils/files.c:1786:58: warning: format '%ld' expects argument of type 'long int', but argument 4 has type 'size_t' {aka 'unsigned int'} [-Wformat=] + 1786 | print_error( " (%d out of %d items of size %ld). ", n_done, n, + | ~~^ + | | + | long int + | %d + 1787 | element_size ); + | ~~~~~~~~~~~~ + | | + | size_t {aka unsigned int} +/build/libminc-2.4.03/volume_io/Prog_utils/files.c: In function 'io_quoted_string': +/build/libminc-2.4.03/volume_io/Prog_utils/files.c:2445:34: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 2445 | *str = alloc_string( length ); + | ^~~~~~ +[ 33%] Building C object CMakeFiles/minc2.dir/volume_io/Prog_utils/print.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Prog_utils/print.c.o -c /build/libminc-2.4.03/volume_io/Prog_utils/print.c +[ 33%] Building C object CMakeFiles/minc2.dir/volume_io/Prog_utils/progress.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Prog_utils/progress.c.o -c /build/libminc-2.4.03/volume_io/Prog_utils/progress.c +[ 33%] Building C object CMakeFiles/minc2_static.dir/libsrc/minc_convenience.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc/minc_convenience.c.o -c /build/libminc-2.4.03/libsrc/minc_convenience.c +[ 34%] Building C object CMakeFiles/minc2.dir/volume_io/Prog_utils/string.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Prog_utils/string.c.o -c /build/libminc-2.4.03/volume_io/Prog_utils/string.c /build/libminc-2.4.03/libsrc/minc_convenience.c: In function 'miset_valid_range': /build/libminc-2.4.03/libsrc/minc_convenience.c:430:17: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] 430 | fval[0] = valid_range[0]; @@ -2973,10 +3078,22 @@ /build/libminc-2.4.03/libsrc/minc_convenience.c:1378:30: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 1378 | att_val = malloc(att_len + strlen(tm_stamp) + 2); | ^ -[ 33%] Building C object CMakeFiles/minc2_static.dir/libsrc/value_conversion.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc/value_conversion.c.o -c /build/libminc-2.4.03/libsrc/value_conversion.c -[ 33%] Building C object CMakeFiles/minc2.dir/volume_io/Prog_utils/files.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Prog_utils/files.c.o -c /build/libminc-2.4.03/volume_io/Prog_utils/files.c +[ 34%] Building C object CMakeFiles/minc2_static.dir/libsrc/nd_loop.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc/nd_loop.c.o -c /build/libminc-2.4.03/libsrc/nd_loop.c +/build/libminc-2.4.03/volume_io/Prog_utils/string.c: In function 'create_string': +/build/libminc-2.4.03/volume_io/Prog_utils/string.c:40:25: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 40 | str = alloc_string( string_length(initial) ); + | ^~~~~~~~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/volume_io/Prog_utils/string.c: In function 'strip_outer_blanks': +/build/libminc-2.4.03/volume_io/Prog_utils/string.c:235:63: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 235 | stripped = alloc_string( last_non_blank - first_non_blank + 1 ); + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~ +[ 34%] Building C object CMakeFiles/minc2.dir/volume_io/Prog_utils/time.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Prog_utils/time.c.o -c /build/libminc-2.4.03/volume_io/Prog_utils/time.c +[ 35%] Building C object CMakeFiles/minc2_static.dir/libsrc/netcdf_convenience.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc/netcdf_convenience.c.o -c /build/libminc-2.4.03/libsrc/netcdf_convenience.c +[ 35%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/evaluate.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/evaluate.c.o -c /build/libminc-2.4.03/volume_io/Volumes/evaluate.c In file included from /build/libminc-2.4.03/libsrc/minc_private.h:84, from /build/libminc-2.4.03/libsrc/netcdf_convenience.c:182: /build/libminc-2.4.03/libsrc/netcdf_convenience.c: In function 'miexpand_file': @@ -2990,38 +3107,17 @@ /build/libminc-2.4.03/libsrc/netcdf_convenience.c:1033:38: warning: conversion to 'int' from 'size_t' {aka 'unsigned int'} may change the sign of the result [-Wsign-conversion] 1033 | strlen(value) + 1, value); | ~~~~~~~~~~~~~~^~~ -[ 34%] Building C object CMakeFiles/minc2.dir/volume_io/Prog_utils/print.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Prog_utils/print.c.o -c /build/libminc-2.4.03/volume_io/Prog_utils/print.c -/build/libminc-2.4.03/volume_io/Prog_utils/files.c: In function 'extract_directory': -/build/libminc-2.4.03/volume_io/Prog_utils/files.c:1249:35: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 1249 | directory = alloc_string( slash_index ); - | ^~~~~~~~~~~ -/build/libminc-2.4.03/volume_io/Prog_utils/files.c: In function 'input_binary_data': -/build/libminc-2.4.03/volume_io/Prog_utils/files.c:1746:58: warning: format '%ld' expects argument of type 'long int', but argument 4 has type 'size_t' {aka 'unsigned int'} [-Wformat=] - 1746 | print_error( " (%d out of %d items of size %ld). ", n_done, n, - | ~~^ - | | - | long int - | %d - 1747 | element_size ); - | ~~~~~~~~~~~~ - | | - | size_t {aka unsigned int} -/build/libminc-2.4.03/volume_io/Prog_utils/files.c: In function 'output_binary_data': -/build/libminc-2.4.03/volume_io/Prog_utils/files.c:1786:58: warning: format '%ld' expects argument of type 'long int', but argument 4 has type 'size_t' {aka 'unsigned int'} [-Wformat=] - 1786 | print_error( " (%d out of %d items of size %ld). ", n_done, n, - | ~~^ - | | - | long int - | %d - 1787 | element_size ); - | ~~~~~~~~~~~~ - | | - | size_t {aka unsigned int} -/build/libminc-2.4.03/volume_io/Prog_utils/files.c: In function 'io_quoted_string': -/build/libminc-2.4.03/volume_io/Prog_utils/files.c:2445:34: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 2445 | *str = alloc_string( length ); - | ^~~~~~ +[ 36%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/get_hyperslab.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/get_hyperslab.c.o -c /build/libminc-2.4.03/volume_io/Volumes/get_hyperslab.c +/build/libminc-2.4.03/volume_io/Volumes/evaluate.c: In function 'trilinear_interpolate_rgb': +/build/libminc-2.4.03/volume_io/Volumes/evaluate.c:257:24: warning: conversion from 'VIO_Real' {aka 'double'} to 'unsigned int' may change value [-Wfloat-conversion] + 257 | coefs[c] = outside_value; + | ^~~~~~~~~~~~~ +/build/libminc-2.4.03/volume_io/Volumes/evaluate.c:305:20: warning: conversion from 'VIO_Real' {aka 'double'} to 'int' may change value [-Wfloat-conversion] + 305 | out_rgb[i] = c0 + w * dw; + | ^~ +[ 36%] Building C object CMakeFiles/minc2_static.dir/libsrc/value_conversion.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc/value_conversion.c.o -c /build/libminc-2.4.03/libsrc/value_conversion.c /build/libminc-2.4.03/libsrc/value_conversion.c: In function 'MI_convert_type': /build/libminc-2.4.03/libsrc/value_conversion.c:622:49: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 622 | (size_t) number_of_values*inincr); @@ -3091,10 +3187,10 @@ /build/libminc-2.4.03/libsrc/value_conversion.c:645:11: note: in expansion of macro 'MI_FROM_DOUBLE' 645 | {MI_FROM_DOUBLE(dvalue, outtype, outsgn, outptr)} | ^~~~~~~~~~~~~~ -[ 34%] Building C object CMakeFiles/minc2.dir/volume_io/Prog_utils/progress.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Prog_utils/progress.c.o -c /build/libminc-2.4.03/volume_io/Prog_utils/progress.c -[ 35%] Building C object CMakeFiles/minc2_static.dir/libsrc/voxel_loop.c.o +[ 37%] Building C object CMakeFiles/minc2_static.dir/libsrc/voxel_loop.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc/voxel_loop.c.o -c /build/libminc-2.4.03/libsrc/voxel_loop.c +[ 37%] Building C object CMakeFiles/minc2_static.dir/libsrc/hdf_convenience.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc/hdf_convenience.c.o -c /build/libminc-2.4.03/libsrc/hdf_convenience.c /build/libminc-2.4.03/libsrc/voxel_loop.c: In function 'update_history': /build/libminc-2.4.03/libsrc/voxel_loop.c:1182:15: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 1182 | att_length += strlen(arg_string) + 1; @@ -3102,18 +3198,6 @@ /build/libminc-2.4.03/libsrc/voxel_loop.c:1182:18: warning: conversion to 'int' from 'size_t' {aka 'unsigned int'} may change the sign of the result [-Wsign-conversion] 1182 | att_length += strlen(arg_string) + 1; | ^~~~~~ -[ 36%] Building C object CMakeFiles/minc2.dir/volume_io/Prog_utils/string.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Prog_utils/string.c.o -c /build/libminc-2.4.03/volume_io/Prog_utils/string.c -[ 36%] Building C object CMakeFiles/minc2_static.dir/libsrc/hdf_convenience.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc/hdf_convenience.c.o -c /build/libminc-2.4.03/libsrc/hdf_convenience.c -/build/libminc-2.4.03/volume_io/Prog_utils/string.c: In function 'create_string': -/build/libminc-2.4.03/volume_io/Prog_utils/string.c:40:25: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 40 | str = alloc_string( string_length(initial) ); - | ^~~~~~~~~~~~~~~~~~~~~~ -/build/libminc-2.4.03/volume_io/Prog_utils/string.c: In function 'strip_outer_blanks': -/build/libminc-2.4.03/volume_io/Prog_utils/string.c:235:63: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 235 | stripped = alloc_string( last_non_blank - first_non_blank + 1 ); - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~ /build/libminc-2.4.03/libsrc/hdf_convenience.c: In function 'hdf_var_add': /build/libminc-2.4.03/libsrc/hdf_convenience.c:202:59: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 202 | new->dims = (hsize_t *) malloc(sizeof (hsize_t) * ndims); @@ -3263,27 +3347,29 @@ /build/libminc-2.4.03/libsrc/hdf_convenience.c:2347:35: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 2347 | file_id = H5Fcreate(path, cmode, H5P_DEFAULT, fpid); | ^~~~~ -[ 37%] Building C object CMakeFiles/minc2_static.dir/libsrc/minc_compat.c.o +[ 37%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/input_free.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/input_free.c.o -c /build/libminc-2.4.03/volume_io/Volumes/input_free.c +[ 38%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/input_mnc.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/input_mnc.c.o -c /build/libminc-2.4.03/volume_io/Volumes/input_mnc.c +/build/libminc-2.4.03/volume_io/Volumes/input_mnc.c: In function 'initialize_minc_input_from_minc_id': +/build/libminc-2.4.03/volume_io/Volumes/input_mnc.c:373:61: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] + 373 | irr_starts[d] = malloc(sizeof(VIO_Real) * file->sizes_in_file[d]); + | ^ +/build/libminc-2.4.03/volume_io/Volumes/input_mnc.c:374:61: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] + 374 | irr_widths[d] = malloc(sizeof(VIO_Real) * file->sizes_in_file[d]); + | ^ +[ 39%] Building C object CMakeFiles/minc2_static.dir/libsrc/minc_compat.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc/minc_compat.c.o -c /build/libminc-2.4.03/libsrc/minc_compat.c -[ 37%] Building C object CMakeFiles/minc2.dir/volume_io/Prog_utils/time.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Prog_utils/time.c.o -c /build/libminc-2.4.03/volume_io/Prog_utils/time.c /build/libminc-2.4.03/libsrc/minc_compat.c: In function 'MI2attcopy': /build/libminc-2.4.03/libsrc/minc_compat.c:307:51: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 307 | val_ptr = malloc(MI2typelen(att_type) * att_length); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ -[ 37%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/evaluate.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/evaluate.c.o -c /build/libminc-2.4.03/volume_io/Volumes/evaluate.c -/build/libminc-2.4.03/volume_io/Volumes/evaluate.c: In function 'trilinear_interpolate_rgb': -/build/libminc-2.4.03/volume_io/Volumes/evaluate.c:257:24: warning: conversion from 'VIO_Real' {aka 'double'} to 'unsigned int' may change value [-Wfloat-conversion] - 257 | coefs[c] = outside_value; - | ^~~~~~~~~~~~~ -/build/libminc-2.4.03/volume_io/Volumes/evaluate.c:305:20: warning: conversion from 'VIO_Real' {aka 'double'} to 'int' may change value [-Wfloat-conversion] - 305 | out_rgb[i] = c0 + w * dw; - | ^~ -[ 38%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/get_hyperslab.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/get_hyperslab.c.o -c /build/libminc-2.4.03/volume_io/Volumes/get_hyperslab.c -[ 38%] Building C object CMakeFiles/minc2_static.dir/libsrc/minc_simple.c.o +[ 39%] Building C object CMakeFiles/minc2_static.dir/libsrc/minc_simple.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc/minc_simple.c.o -c /build/libminc-2.4.03/libsrc/minc_simple.c +[ 40%] Building C object CMakeFiles/minc2_static.dir/libsrc/minc_format_convert.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc/minc_format_convert.c.o -c /build/libminc-2.4.03/libsrc/minc_format_convert.c +[ 40%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/input_volume.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/input_volume.c.o -c /build/libminc-2.4.03/volume_io/Volumes/input_volume.c /build/libminc-2.4.03/libsrc/minc_simple.c: In function 'minc_load_data': /build/libminc-2.4.03/libsrc/minc_simple.c:393:27: warning: conversion to 'size_t' {aka 'unsigned int'} from 'long int' may change the sign of the result [-Wsign-conversion] 393 | ucount[j++] = dim_len[i]; @@ -3314,57 +3400,101 @@ /build/libminc-2.4.03/libsrc/minc_simple.c:462:52: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 462 | p_att->att_val = malloc(p_att->att_len * nctypelen(p_att->att_type)); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -[ 39%] Building C object CMakeFiles/minc2_static.dir/libsrc/minc_format_convert.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/libsrc/minc_format_convert.c.o -c /build/libminc-2.4.03/libsrc/minc_format_convert.c -[ 39%] Building C object CMakeFiles/minc2_static.dir/volume_io/Geometry/colour.c.o +[ 40%] Building C object CMakeFiles/minc2_static.dir/volume_io/Geometry/colour.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Geometry/colour.c.o -c /build/libminc-2.4.03/volume_io/Geometry/colour.c -[ 39%] Building C object CMakeFiles/minc2_static.dir/volume_io/Geometry/colour_def.c.o +[ 41%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/multidim_arrays.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/multidim_arrays.c.o -c /build/libminc-2.4.03/volume_io/Volumes/multidim_arrays.c +[ 41%] Building C object CMakeFiles/minc2_static.dir/volume_io/Geometry/colour_def.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Geometry/colour_def.c.o -c /build/libminc-2.4.03/volume_io/Geometry/colour_def.c -[ 39%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/input_free.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/input_free.c.o -c /build/libminc-2.4.03/volume_io/Volumes/input_free.c -[ 40%] Building C object CMakeFiles/minc2_static.dir/volume_io/Geometry/gaussian.c.o +[ 42%] Building C object CMakeFiles/minc2_static.dir/volume_io/Geometry/gaussian.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Geometry/gaussian.c.o -c /build/libminc-2.4.03/volume_io/Geometry/gaussian.c -[ 40%] Building C object CMakeFiles/minc2_static.dir/volume_io/Geometry/inverse.c.o +[ 42%] Building C object CMakeFiles/minc2_static.dir/volume_io/Geometry/inverse.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Geometry/inverse.c.o -c /build/libminc-2.4.03/volume_io/Geometry/inverse.c -[ 41%] Building C object CMakeFiles/minc2_static.dir/volume_io/Geometry/newton.c.o +[ 42%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/output_mnc.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/output_mnc.c.o -c /build/libminc-2.4.03/volume_io/Volumes/output_mnc.c +[ 43%] Building C object CMakeFiles/minc2_static.dir/volume_io/Geometry/newton.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Geometry/newton.c.o -c /build/libminc-2.4.03/volume_io/Geometry/newton.c -[ 42%] Building C object CMakeFiles/minc2_static.dir/volume_io/Geometry/splines.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Geometry/splines.c.o -c /build/libminc-2.4.03/volume_io/Geometry/splines.c -[ 42%] Building C object CMakeFiles/minc2_static.dir/volume_io/Geometry/points.c.o +/build/libminc-2.4.03/volume_io/Volumes/output_mnc.c: In function 'add_minc_history': +/build/libminc-2.4.03/volume_io/Volumes/output_mnc.c:779:33: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 779 | new_history = alloc_string( old_att_length ); + | ^~~~~~~~~~~~~~ +[ 44%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/output_volume.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/output_volume.c.o -c /build/libminc-2.4.03/volume_io/Volumes/output_volume.c +[ 44%] Building C object CMakeFiles/minc2_static.dir/volume_io/Geometry/points.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Geometry/points.c.o -c /build/libminc-2.4.03/volume_io/Geometry/points.c -[ 43%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/input_mnc.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/input_mnc.c.o -c /build/libminc-2.4.03/volume_io/Volumes/input_mnc.c -[ 43%] Building C object CMakeFiles/minc2_static.dir/volume_io/Geometry/tensors.c.o +[ 45%] Building C object CMakeFiles/minc2_static.dir/volume_io/Geometry/splines.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Geometry/splines.c.o -c /build/libminc-2.4.03/volume_io/Geometry/splines.c +[ 45%] Building C object CMakeFiles/minc2_static.dir/volume_io/Geometry/tensors.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Geometry/tensors.c.o -c /build/libminc-2.4.03/volume_io/Geometry/tensors.c -[ 44%] Building C object CMakeFiles/minc2_static.dir/volume_io/Geometry/transforms.c.o +[ 45%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/set_hyperslab.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/set_hyperslab.c.o -c /build/libminc-2.4.03/volume_io/Volumes/set_hyperslab.c +[ 46%] Building C object CMakeFiles/minc2_static.dir/volume_io/Geometry/transforms.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Geometry/transforms.c.o -c /build/libminc-2.4.03/volume_io/Geometry/transforms.c -[ 44%] Building C object CMakeFiles/minc2_static.dir/volume_io/MNI_formats/gen_xf_io.c.o +[ 46%] Building C object CMakeFiles/minc2_static.dir/volume_io/MNI_formats/gen_xf_io.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/MNI_formats/gen_xf_io.c.o -c /build/libminc-2.4.03/volume_io/MNI_formats/gen_xf_io.c -/build/libminc-2.4.03/volume_io/Volumes/input_mnc.c: In function 'initialize_minc_input_from_minc_id': -/build/libminc-2.4.03/volume_io/Volumes/input_mnc.c:373:61: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] - 373 | irr_starts[d] = malloc(sizeof(VIO_Real) * file->sizes_in_file[d]); - | ^ -/build/libminc-2.4.03/volume_io/Volumes/input_mnc.c:374:61: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] - 374 | irr_widths[d] = malloc(sizeof(VIO_Real) * file->sizes_in_file[d]); - | ^ /build/libminc-2.4.03/volume_io/MNI_formats/gen_xf_io.c: In function 'output_one_transform': /build/libminc-2.4.03/volume_io/MNI_formats/gen_xf_io.c:184:74: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 184 | volume_filename = alloc_string( string_length(prefix_filename) + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 185 | 100 ); | ~~~ -[ 44%] Building C object CMakeFiles/minc2_static.dir/volume_io/MNI_formats/gen_xfs.c.o +[ 46%] Building C object CMakeFiles/minc2_static.dir/volume_io/MNI_formats/gen_xfs.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/MNI_formats/gen_xfs.c.o -c /build/libminc-2.4.03/volume_io/MNI_formats/gen_xfs.c -[ 45%] Building C object CMakeFiles/minc2_static.dir/volume_io/MNI_formats/grid_transforms.c.o +[ 47%] Building C object CMakeFiles/minc2_static.dir/volume_io/MNI_formats/grid_transforms.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/MNI_formats/grid_transforms.c.o -c /build/libminc-2.4.03/volume_io/MNI_formats/grid_transforms.c -[ 45%] Building C object CMakeFiles/minc2_static.dir/volume_io/MNI_formats/mni_io.c.o +[ 47%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/volume_cache.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/volume_cache.c.o -c /build/libminc-2.4.03/volume_io/Volumes/volume_cache.c +[ 47%] Building C object CMakeFiles/minc2_static.dir/volume_io/MNI_formats/mni_io.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/MNI_formats/mni_io.c.o -c /build/libminc-2.4.03/volume_io/MNI_formats/mni_io.c -[ 46%] Building C object CMakeFiles/minc2_static.dir/volume_io/MNI_formats/tag_points.c.o +[ 48%] Building C object CMakeFiles/minc2_static.dir/volume_io/MNI_formats/tag_points.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/MNI_formats/tag_points.c.o -c /build/libminc-2.4.03/volume_io/MNI_formats/tag_points.c -[ 46%] Building C object CMakeFiles/minc2_static.dir/volume_io/MNI_formats/thin_plate_spline.c.o +[ 48%] Building C object CMakeFiles/minc2_static.dir/volume_io/MNI_formats/thin_plate_spline.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/MNI_formats/thin_plate_spline.c.o -c /build/libminc-2.4.03/volume_io/MNI_formats/thin_plate_spline.c -[ 47%] Building C object CMakeFiles/minc2_static.dir/volume_io/Prog_utils/alloc.c.o +[ 49%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/volumes.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/volumes.c.o -c /build/libminc-2.4.03/volume_io/Volumes/volumes.c +/build/libminc-2.4.03/volume_io/Volumes/volumes.c: In function 'copy_volume_definition_no_alloc': +/build/libminc-2.4.03/volume_io/Volumes/volumes.c:2630:60: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + 2630 | VIO_Real *irr_starts = malloc(sizeof(VIO_Real) * sizes[c]); + | ^ +/build/libminc-2.4.03/volume_io/Volumes/volumes.c:2631:60: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + 2631 | VIO_Real *irr_widths = malloc(sizeof(VIO_Real) * sizes[c]); + | ^ +/build/libminc-2.4.03/volume_io/Volumes/volumes.c: In function 'copy_volume_new_type': +/build/libminc-2.4.03/volume_io/Volumes/volumes.c:2819:44: warning: conversion from 'double' to 'signed char' may change value [-Wfloat-conversion] + 2819 | ((signed char *) dst)[i] = value; + | ^~~~~ +/build/libminc-2.4.03/volume_io/Volumes/volumes.c:2823:46: warning: conversion from 'double' to 'unsigned char' may change value [-Wfloat-conversion] + 2823 | ((unsigned char *) dst)[i] = value; + | ^~~~~ +/build/libminc-2.4.03/volume_io/Volumes/volumes.c:2829:45: warning: conversion from 'double' to 'short int' may change value [-Wfloat-conversion] + 2829 | ((signed short *) dst)[i] = value; + | ^~~~~ +/build/libminc-2.4.03/volume_io/Volumes/volumes.c:2833:47: warning: conversion from 'double' to 'short unsigned int' may change value [-Wfloat-conversion] + 2833 | ((unsigned short *) dst)[i] = value; + | ^~~~~ +/build/libminc-2.4.03/volume_io/Volumes/volumes.c:2839:43: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] + 2839 | ((signed int *) dst)[i] = value; + | ^~~~~ +/build/libminc-2.4.03/volume_io/Volumes/volumes.c:2843:45: warning: conversion from 'double' to 'unsigned int' may change value [-Wfloat-conversion] + 2843 | ((unsigned int *) dst)[i] = value; + | ^~~~~ +/build/libminc-2.4.03/volume_io/Volumes/volumes.c:2847:34: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] + 2847 | ((float *) dst)[i] = value; + | ^~~~~ +/build/libminc-2.4.03/volume_io/Volumes/volumes.c: In function 'set_volume_irregular_starts': +/build/libminc-2.4.03/volume_io/Volumes/volumes.c:2942:51: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] + 2942 | volume->irregular_starts[idim] = malloc(count * sizeof (VIO_Real)); + | ^ +/build/libminc-2.4.03/volume_io/Volumes/volumes.c: In function 'set_volume_irregular_widths': +/build/libminc-2.4.03/volume_io/Volumes/volumes.c:2975:51: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] + 2975 | volume->irregular_widths[idim] = malloc(count * sizeof (VIO_Real)); + | ^ +[ 50%] Building C object CMakeFiles/minc2_static.dir/volume_io/Prog_utils/alloc.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/alloc.c.o -c /build/libminc-2.4.03/volume_io/Prog_utils/alloc.c +[ 50%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/input_mnc2.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/input_mnc2.c.o -c /build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c +[ 50%] Building C object CMakeFiles/minc2_static.dir/volume_io/Prog_utils/alloc_check.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/alloc_check.c.o -c /build/libminc-2.4.03/volume_io/Prog_utils/alloc_check.c /build/libminc-2.4.03/volume_io/Prog_utils/alloc.c: In function 'alloc_memory_in_bytes': /build/libminc-2.4.03/volume_io/Prog_utils/alloc.c:247:50: warning: format '%lu' expects argument of type 'long unsigned int', but argument 2 has type 'size_t' {aka 'unsigned int'} [-Wformat=] 247 | print_error( "Cannot alloc 1D array of %lu bytes.\n", n_bytes ); @@ -3609,18 +3739,50 @@ | ~~~~~~~~~~ | | | size_t {aka unsigned int} -[ 47%] Building C object CMakeFiles/minc2_static.dir/volume_io/Prog_utils/alloc_check.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/alloc_check.c.o -c /build/libminc-2.4.03/volume_io/Prog_utils/alloc_check.c -[ 47%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/input_volume.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/input_volume.c.o -c /build/libminc-2.4.03/volume_io/Volumes/input_volume.c -[ 47%] Building C object CMakeFiles/minc2_static.dir/volume_io/Prog_utils/arrays.c.o +/build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c: In function 'initialize_minc_input_from_minc2_id': +/build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c:144:42: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 144 | miget_dimension_sizes(file_dims, file->n_file_dimensions, dimension_size); + | ~~~~^~~~~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c:145:63: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 145 | miget_dimension_separations(file_dims, MI_ORDER_FILE, file->n_file_dimensions, file_step); + | ~~~~^~~~~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c:146:58: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 146 | miget_dimension_starts(file_dims, MI_ORDER_FILE, file->n_file_dimensions, file_start); + | ~~~~^~~~~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c:153:32: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'long int' may change value [-Wconversion] + 153 | file->sizes_in_file[d] = dimension_size[d]; + | ^~~~~~~~~~~~~~ +/build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c:179:21: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 179 | slices_count*=dimension_size[d]; + | ^~ +/build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c:179:23: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] + 179 | slices_count*=dimension_size[d]; + | ^~~~~~~~~~~~~~ +/build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c:181:38: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 181 | slice_start=(misize_t *)calloc(n_slice_dimensions,sizeof(misize_t)); + | ^~~~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c:182:51: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 182 | miget_slice_range(file->minc2id,slice_start,n_slice_dimensions,&volume_max,&volume_min); + | ^~~~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c:203:55: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 203 | miget_slice_range(file->minc2id,slice_start,n_slice_dimensions,&slice_max,&slice_min); + | ^~~~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c:372:51: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] + 372 | irr_starts[d] = malloc(sizeof(VIO_Real) * file->sizes_in_file[d]); + | ^ +/build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c:373:51: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] + 373 | irr_widths[d] = malloc(sizeof(VIO_Real) * file->sizes_in_file[d]); + | ^ +/build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c: In function 'input_minc2_hyperslab': +/build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c:707:37: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'long int' may change the sign of the result [-Wsign-conversion] + 707 | used_count[n_file_dims] = file->sizes_in_file[n_file_dims]; + | ^~~~ +[ 50%] Building C object CMakeFiles/minc2_static.dir/volume_io/Prog_utils/arrays.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/arrays.c.o -c /build/libminc-2.4.03/volume_io/Prog_utils/arrays.c -[ 48%] Building C object CMakeFiles/minc2_static.dir/volume_io/Prog_utils/files.c.o +[ 51%] Building C object CMakeFiles/minc2_static.dir/volume_io/Prog_utils/files.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/files.c.o -c /build/libminc-2.4.03/volume_io/Prog_utils/files.c -[ 48%] Building C object CMakeFiles/minc2_static.dir/volume_io/Prog_utils/print.c.o +[ 51%] Building C object CMakeFiles/minc2_static.dir/volume_io/Prog_utils/print.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/print.c.o -c /build/libminc-2.4.03/volume_io/Prog_utils/print.c -[ 49%] Building C object CMakeFiles/minc2_static.dir/volume_io/Prog_utils/progress.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/progress.c.o -c /build/libminc-2.4.03/volume_io/Prog_utils/progress.c /build/libminc-2.4.03/volume_io/Prog_utils/files.c: In function 'extract_directory': /build/libminc-2.4.03/volume_io/Prog_utils/files.c:1249:35: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 1249 | directory = alloc_string( slash_index ); @@ -3651,21 +3813,34 @@ /build/libminc-2.4.03/volume_io/Prog_utils/files.c:2445:34: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 2445 | *str = alloc_string( length ); | ^~~~~~ -[ 50%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/multidim_arrays.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/multidim_arrays.c.o -c /build/libminc-2.4.03/volume_io/Volumes/multidim_arrays.c -[ 50%] Building C object CMakeFiles/minc2_static.dir/volume_io/Prog_utils/string.c.o +[ 52%] Building C object CMakeFiles/minc2_static.dir/volume_io/Prog_utils/progress.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/progress.c.o -c /build/libminc-2.4.03/volume_io/Prog_utils/progress.c +[ 53%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/output_mnc2.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/output_mnc2.c.o -c /build/libminc-2.4.03/volume_io/Volumes/output_mnc2.c +[ 53%] Building C object CMakeFiles/minc2_static.dir/volume_io/Prog_utils/string.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/string.c.o -c /build/libminc-2.4.03/volume_io/Prog_utils/string.c +/build/libminc-2.4.03/volume_io/Volumes/output_mnc2.c: In function 'output_minc2_hyperslab': +/build/libminc-2.4.03/volume_io/Volumes/output_mnc2.c:875:37: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'long int' may change the sign of the result [-Wsign-conversion] + 875 | long_file_start[file_ind] = (long) file_start[file_ind]; + | ^ +/build/libminc-2.4.03/volume_io/Volumes/output_mnc2.c:876:37: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'long int' may change the sign of the result [-Wsign-conversion] + 876 | long_file_count[file_ind] = (long) file_count[file_ind]; + | ^ /build/libminc-2.4.03/volume_io/Prog_utils/string.c: In function 'create_string': /build/libminc-2.4.03/volume_io/Prog_utils/string.c:40:25: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 40 | str = alloc_string( string_length(initial) ); | ^~~~~~~~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/volume_io/Volumes/output_mnc2.c: In function 'output_the_volume2': +/build/libminc-2.4.03/volume_io/Volumes/output_mnc2.c:1246:77: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 1246 | miset_slice_range(file->minc2id,(const misize_t*)file_indices,file->n_file_dimensions,real_max,real_min); + | ~~~~^~~~~~~~~~~~~~~~~~~ /build/libminc-2.4.03/volume_io/Prog_utils/string.c: In function 'strip_outer_blanks': /build/libminc-2.4.03/volume_io/Prog_utils/string.c:235:63: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 235 | stripped = alloc_string( last_non_blank - first_non_blank + 1 ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~ -[ 51%] Building C object CMakeFiles/minc2_static.dir/volume_io/Prog_utils/time.c.o +[ 54%] Building C object CMakeFiles/minc2_static.dir/volume_io/Prog_utils/time.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/time.c.o -c /build/libminc-2.4.03/volume_io/Prog_utils/time.c -[ 51%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/evaluate.c.o +[ 54%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/evaluate.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Volumes/evaluate.c.o -c /build/libminc-2.4.03/volume_io/Volumes/evaluate.c /build/libminc-2.4.03/volume_io/Volumes/evaluate.c: In function 'trilinear_interpolate_rgb': /build/libminc-2.4.03/volume_io/Volumes/evaluate.c:257:24: warning: conversion from 'VIO_Real' {aka 'double'} to 'unsigned int' may change value [-Wfloat-conversion] @@ -3674,21 +3849,11 @@ /build/libminc-2.4.03/volume_io/Volumes/evaluate.c:305:20: warning: conversion from 'VIO_Real' {aka 'double'} to 'int' may change value [-Wfloat-conversion] 305 | out_rgb[i] = c0 + w * dw; | ^~ -[ 51%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/output_mnc.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/output_mnc.c.o -c /build/libminc-2.4.03/volume_io/Volumes/output_mnc.c -[ 52%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/get_hyperslab.c.o +[ 55%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/get_hyperslab.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Volumes/get_hyperslab.c.o -c /build/libminc-2.4.03/volume_io/Volumes/get_hyperslab.c -/build/libminc-2.4.03/volume_io/Volumes/output_mnc.c: In function 'add_minc_history': -/build/libminc-2.4.03/volume_io/Volumes/output_mnc.c:779:33: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 779 | new_history = alloc_string( old_att_length ); - | ^~~~~~~~~~~~~~ -[ 52%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/input_free.c.o +[ 55%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/input_free.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Volumes/input_free.c.o -c /build/libminc-2.4.03/volume_io/Volumes/input_free.c -[ 53%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/output_volume.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/output_volume.c.o -c /build/libminc-2.4.03/volume_io/Volumes/output_volume.c -[ 53%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/set_hyperslab.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/set_hyperslab.c.o -c /build/libminc-2.4.03/volume_io/Volumes/set_hyperslab.c -[ 53%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/input_mnc.c.o +[ 55%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/input_mnc.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Volumes/input_mnc.c.o -c /build/libminc-2.4.03/volume_io/Volumes/input_mnc.c /build/libminc-2.4.03/volume_io/Volumes/input_mnc.c: In function 'initialize_minc_input_from_minc_id': /build/libminc-2.4.03/volume_io/Volumes/input_mnc.c:373:61: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] @@ -3697,122 +3862,41 @@ /build/libminc-2.4.03/volume_io/Volumes/input_mnc.c:374:61: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] 374 | irr_widths[d] = malloc(sizeof(VIO_Real) * file->sizes_in_file[d]); | ^ -[ 54%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/input_volume.c.o +[ 55%] Linking C shared library libminc2.so +/usr/bin/cmake -E cmake_link_script CMakeFiles/minc2.dir/link.txt --verbose=1 +/usr/bin/cc -fPIC -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libminc2.so.5.2.0 -o libminc2.so.5.2.0 CMakeFiles/minc2.dir/libsrc2/convert.c.o 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CMakeFiles/minc2.dir/libsrc/netcdf_convenience.c.o CMakeFiles/minc2.dir/libsrc/value_conversion.c.o CMakeFiles/minc2.dir/libsrc/voxel_loop.c.o CMakeFiles/minc2.dir/libsrc/hdf_convenience.c.o CMakeFiles/minc2.dir/libsrc/minc_compat.c.o CMakeFiles/minc2.dir/libsrc/minc_simple.c.o CMakeFiles/minc2.dir/libsrc/minc_format_convert.c.o CMakeFiles/minc2.dir/volume_io/Geometry/colour.c.o CMakeFiles/minc2.dir/volume_io/Geometry/colour_def.c.o CMakeFiles/minc2.dir/volume_io/Geometry/gaussian.c.o CMakeFiles/minc2.dir/volume_io/Geometry/inverse.c.o CMakeFiles/minc2.dir/volume_io/Geometry/newton.c.o CMakeFiles/minc2.dir/volume_io/Geometry/points.c.o CMakeFiles/minc2.dir/volume_io/Geometry/splines.c.o CMakeFiles/minc2.dir/volume_io/Geometry/tensors.c.o CMakeFiles/minc2.dir/volume_io/Geometry/transforms.c.o CMakeFiles/minc2.dir/volume_io/MNI_formats/gen_xf_io.c.o CMakeFiles/minc2.dir/volume_io/MNI_formats/gen_xfs.c.o CMakeFiles/minc2.dir/volume_io/MNI_formats/grid_transforms.c.o CMakeFiles/minc2.dir/volume_io/MNI_formats/mni_io.c.o CMakeFiles/minc2.dir/volume_io/MNI_formats/tag_points.c.o CMakeFiles/minc2.dir/volume_io/MNI_formats/thin_plate_spline.c.o CMakeFiles/minc2.dir/volume_io/Prog_utils/alloc.c.o CMakeFiles/minc2.dir/volume_io/Prog_utils/alloc_check.c.o CMakeFiles/minc2.dir/volume_io/Prog_utils/arrays.c.o CMakeFiles/minc2.dir/volume_io/Prog_utils/files.c.o CMakeFiles/minc2.dir/volume_io/Prog_utils/print.c.o CMakeFiles/minc2.dir/volume_io/Prog_utils/progress.c.o CMakeFiles/minc2.dir/volume_io/Prog_utils/string.c.o CMakeFiles/minc2.dir/volume_io/Prog_utils/time.c.o CMakeFiles/minc2.dir/volume_io/Volumes/evaluate.c.o CMakeFiles/minc2.dir/volume_io/Volumes/get_hyperslab.c.o CMakeFiles/minc2.dir/volume_io/Volumes/input_free.c.o CMakeFiles/minc2.dir/volume_io/Volumes/input_mnc.c.o CMakeFiles/minc2.dir/volume_io/Volumes/input_volume.c.o CMakeFiles/minc2.dir/volume_io/Volumes/multidim_arrays.c.o CMakeFiles/minc2.dir/volume_io/Volumes/output_mnc.c.o CMakeFiles/minc2.dir/volume_io/Volumes/output_volume.c.o CMakeFiles/minc2.dir/volume_io/Volumes/set_hyperslab.c.o CMakeFiles/minc2.dir/volume_io/Volumes/volume_cache.c.o CMakeFiles/minc2.dir/volume_io/Volumes/volumes.c.o CMakeFiles/minc2.dir/volume_io/Volumes/input_mnc2.c.o CMakeFiles/minc2.dir/volume_io/Volumes/output_mnc2.c.o -Wl,-rpath,/usr/lib/arm-linux-gnueabihf/hdf5/serial: /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lrt -lnetcdf -lm -ldl -lnetcdf -ldl -lm -lrt -lnetcdf -lm -ldl -lnetcdf -lm -ldl +/usr/bin/cmake -E cmake_symlink_library libminc2.so.5.2.0 libminc2.so.5.2.0 libminc2.so +make[3]: Leaving directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' +[ 55%] Built target minc2 +make -f ezminc/CMakeFiles/minc_io.dir/build.make ezminc/CMakeFiles/minc_io.dir/depend +make[3]: Entering directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' +cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/ezminc /build/libminc-2.4.03/obj-arm-linux-gnueabihf /build/libminc-2.4.03/obj-arm-linux-gnueabihf/ezminc /build/libminc-2.4.03/obj-arm-linux-gnueabihf/ezminc/CMakeFiles/minc_io.dir/DependInfo.cmake --color= +Dependee "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/ezminc/CMakeFiles/minc_io.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/ezminc/CMakeFiles/minc_io.dir/depend.internal". +Dependee "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/ezminc/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/ezminc/CMakeFiles/minc_io.dir/depend.internal". +Scanning dependencies of target minc_io +make[3]: Leaving directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' +make -f ezminc/CMakeFiles/minc_io.dir/build.make ezminc/CMakeFiles/minc_io.dir/build +make[3]: Entering directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' +[ 55%] Building CXX object ezminc/CMakeFiles/minc_io.dir/minc_1_rw.cpp.o +cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/ezminc && /usr/bin/c++ -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc_io_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc_io.dir/minc_1_rw.cpp.o -c /build/libminc-2.4.03/ezminc/minc_1_rw.cpp +[ 56%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/input_volume.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Volumes/input_volume.c.o -c /build/libminc-2.4.03/volume_io/Volumes/input_volume.c -[ 54%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/volume_cache.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/volume_cache.c.o -c /build/libminc-2.4.03/volume_io/Volumes/volume_cache.c -[ 55%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/volumes.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/volumes.c.o -c /build/libminc-2.4.03/volume_io/Volumes/volumes.c -/build/libminc-2.4.03/volume_io/Volumes/volumes.c: In function 'copy_volume_definition_no_alloc': -/build/libminc-2.4.03/volume_io/Volumes/volumes.c:2630:60: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - 2630 | VIO_Real *irr_starts = malloc(sizeof(VIO_Real) * sizes[c]); - | ^ -/build/libminc-2.4.03/volume_io/Volumes/volumes.c:2631:60: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - 2631 | VIO_Real *irr_widths = malloc(sizeof(VIO_Real) * sizes[c]); - | ^ -/build/libminc-2.4.03/volume_io/Volumes/volumes.c: In function 'copy_volume_new_type': -/build/libminc-2.4.03/volume_io/Volumes/volumes.c:2819:44: warning: conversion from 'double' to 'signed char' may change value [-Wfloat-conversion] - 2819 | ((signed char *) dst)[i] = value; - | ^~~~~ -/build/libminc-2.4.03/volume_io/Volumes/volumes.c:2823:46: warning: conversion from 'double' to 'unsigned char' may change value [-Wfloat-conversion] - 2823 | ((unsigned char *) dst)[i] = value; - | ^~~~~ -/build/libminc-2.4.03/volume_io/Volumes/volumes.c:2829:45: warning: conversion from 'double' to 'short int' may change value [-Wfloat-conversion] - 2829 | ((signed short *) dst)[i] = value; - | ^~~~~ -/build/libminc-2.4.03/volume_io/Volumes/volumes.c:2833:47: warning: conversion from 'double' to 'short unsigned int' may change value [-Wfloat-conversion] - 2833 | ((unsigned short *) dst)[i] = value; - | ^~~~~ -/build/libminc-2.4.03/volume_io/Volumes/volumes.c:2839:43: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] - 2839 | ((signed int *) dst)[i] = value; - | ^~~~~ -/build/libminc-2.4.03/volume_io/Volumes/volumes.c:2843:45: warning: conversion from 'double' to 'unsigned int' may change value [-Wfloat-conversion] - 2843 | ((unsigned int *) dst)[i] = value; - | ^~~~~ -/build/libminc-2.4.03/volume_io/Volumes/volumes.c:2847:34: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] - 2847 | ((float *) dst)[i] = value; - | ^~~~~ -/build/libminc-2.4.03/volume_io/Volumes/volumes.c: In function 'set_volume_irregular_starts': -/build/libminc-2.4.03/volume_io/Volumes/volumes.c:2942:51: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] - 2942 | volume->irregular_starts[idim] = malloc(count * sizeof (VIO_Real)); - | ^ -/build/libminc-2.4.03/volume_io/Volumes/volumes.c: In function 'set_volume_irregular_widths': -/build/libminc-2.4.03/volume_io/Volumes/volumes.c:2975:51: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] - 2975 | volume->irregular_widths[idim] = malloc(count * sizeof (VIO_Real)); - | ^ -[ 55%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/input_mnc2.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/input_mnc2.c.o -c /build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c -[ 55%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/multidim_arrays.c.o +[ 56%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/multidim_arrays.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Volumes/multidim_arrays.c.o -c /build/libminc-2.4.03/volume_io/Volumes/multidim_arrays.c -/build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c: In function 'initialize_minc_input_from_minc2_id': -/build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c:144:42: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 144 | miget_dimension_sizes(file_dims, file->n_file_dimensions, dimension_size); - | ~~~~^~~~~~~~~~~~~~~~~~~ -/build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c:145:63: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 145 | miget_dimension_separations(file_dims, MI_ORDER_FILE, file->n_file_dimensions, file_step); - | ~~~~^~~~~~~~~~~~~~~~~~~ -/build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c:146:58: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 146 | miget_dimension_starts(file_dims, MI_ORDER_FILE, file->n_file_dimensions, file_start); - | ~~~~^~~~~~~~~~~~~~~~~~~ -/build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c:153:32: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'long int' may change value [-Wconversion] - 153 | file->sizes_in_file[d] = dimension_size[d]; - | ^~~~~~~~~~~~~~ -/build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c:179:21: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 179 | slices_count*=dimension_size[d]; - | ^~ -/build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c:179:23: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] - 179 | slices_count*=dimension_size[d]; - | ^~~~~~~~~~~~~~ -/build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c:181:38: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 181 | slice_start=(misize_t *)calloc(n_slice_dimensions,sizeof(misize_t)); - | ^~~~~~~~~~~~~~~~~~ -/build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c:182:51: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 182 | miget_slice_range(file->minc2id,slice_start,n_slice_dimensions,&volume_max,&volume_min); - | ^~~~~~~~~~~~~~~~~~ -/build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c:203:55: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 203 | miget_slice_range(file->minc2id,slice_start,n_slice_dimensions,&slice_max,&slice_min); - | ^~~~~~~~~~~~~~~~~~ -/build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c:372:51: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] - 372 | irr_starts[d] = malloc(sizeof(VIO_Real) * file->sizes_in_file[d]); - | ^ -/build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c:373:51: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] - 373 | irr_widths[d] = malloc(sizeof(VIO_Real) * file->sizes_in_file[d]); - | ^ -/build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c: In function 'input_minc2_hyperslab': -/build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c:707:37: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'long int' may change the sign of the result [-Wsign-conversion] - 707 | used_count[n_file_dims] = file->sizes_in_file[n_file_dims]; - | ^~~~ -[ 56%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/output_mnc2.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc2.dir/volume_io/Volumes/output_mnc2.c.o -c /build/libminc-2.4.03/volume_io/Volumes/output_mnc2.c -/build/libminc-2.4.03/volume_io/Volumes/output_mnc2.c: In function 'output_minc2_hyperslab': -/build/libminc-2.4.03/volume_io/Volumes/output_mnc2.c:875:37: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'long int' may change the sign of the result [-Wsign-conversion] - 875 | long_file_start[file_ind] = (long) file_start[file_ind]; - | ^ -/build/libminc-2.4.03/volume_io/Volumes/output_mnc2.c:876:37: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'long int' may change the sign of the result [-Wsign-conversion] - 876 | long_file_count[file_ind] = (long) file_count[file_ind]; - | ^ -/build/libminc-2.4.03/volume_io/Volumes/output_mnc2.c: In function 'output_the_volume2': -/build/libminc-2.4.03/volume_io/Volumes/output_mnc2.c:1246:77: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 1246 | miset_slice_range(file->minc2id,(const misize_t*)file_indices,file->n_file_dimensions,real_max,real_min); - | ~~~~^~~~~~~~~~~~~~~~~~~ [ 57%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/output_mnc.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Volumes/output_mnc.c.o -c /build/libminc-2.4.03/volume_io/Volumes/output_mnc.c -[ 57%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/output_volume.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Volumes/output_volume.c.o -c /build/libminc-2.4.03/volume_io/Volumes/output_volume.c /build/libminc-2.4.03/volume_io/Volumes/output_mnc.c: In function 'add_minc_history': /build/libminc-2.4.03/volume_io/Volumes/output_mnc.c:779:33: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 779 | new_history = alloc_string( old_att_length ); | ^~~~~~~~~~~~~~ +[ 57%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/output_volume.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Volumes/output_volume.c.o -c /build/libminc-2.4.03/volume_io/Volumes/output_volume.c [ 58%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/set_hyperslab.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Volumes/set_hyperslab.c.o -c /build/libminc-2.4.03/volume_io/Volumes/set_hyperslab.c [ 58%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/volume_cache.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Volumes/volume_cache.c.o -c /build/libminc-2.4.03/volume_io/Volumes/volume_cache.c [ 59%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/volumes.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Volumes/volumes.c.o -c /build/libminc-2.4.03/volume_io/Volumes/volumes.c -[ 59%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/input_mnc2.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Volumes/input_mnc2.c.o -c /build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c -[ 59%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/output_mnc2.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Volumes/output_mnc2.c.o -c /build/libminc-2.4.03/volume_io/Volumes/output_mnc2.c /build/libminc-2.4.03/volume_io/Volumes/volumes.c: In function 'copy_volume_definition_no_alloc': /build/libminc-2.4.03/volume_io/Volumes/volumes.c:2630:60: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 2630 | VIO_Real *irr_starts = malloc(sizeof(VIO_Real) * sizes[c]); @@ -3850,6 +3934,8 @@ /build/libminc-2.4.03/volume_io/Volumes/volumes.c:2975:51: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] 2975 | volume->irregular_widths[idim] = malloc(count * sizeof (VIO_Real)); | ^ +[ 59%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/input_mnc2.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Volumes/input_mnc2.c.o -c /build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c /build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c: In function 'initialize_minc_input_from_minc2_id': /build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c:144:42: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 144 | miget_dimension_sizes(file_dims, file->n_file_dimensions, dimension_size); @@ -3884,12 +3970,12 @@ /build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c:373:51: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] 373 | irr_widths[d] = malloc(sizeof(VIO_Real) * file->sizes_in_file[d]); | ^ -[ 59%] Linking C shared library libminc2.so -/usr/bin/cmake -E cmake_link_script CMakeFiles/minc2.dir/link.txt --verbose=1 /build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c: In function 'input_minc2_hyperslab': /build/libminc-2.4.03/volume_io/Volumes/input_mnc2.c:707:37: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'long int' may change the sign of the result [-Wsign-conversion] 707 | used_count[n_file_dims] = file->sizes_in_file[n_file_dims]; | ^~~~ +[ 59%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/output_mnc2.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2_static.dir/volume_io/Volumes/output_mnc2.c.o -c /build/libminc-2.4.03/volume_io/Volumes/output_mnc2.c /build/libminc-2.4.03/volume_io/Volumes/output_mnc2.c: In function 'output_minc2_hyperslab': /build/libminc-2.4.03/volume_io/Volumes/output_mnc2.c:875:37: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'long int' may change the sign of the result [-Wsign-conversion] 875 | long_file_start[file_ind] = (long) file_start[file_ind]; @@ -3897,30 +3983,29 @@ /build/libminc-2.4.03/volume_io/Volumes/output_mnc2.c:876:37: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'long int' may change the sign of the result [-Wsign-conversion] 876 | long_file_count[file_ind] = (long) file_count[file_ind]; | ^ -/usr/bin/cc -fPIC -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libminc2.so.5.2.0 -o libminc2.so.5.2.0 CMakeFiles/minc2.dir/libsrc2/convert.c.o CMakeFiles/minc2.dir/libsrc2/datatype.c.o CMakeFiles/minc2.dir/libsrc2/dimension.c.o CMakeFiles/minc2.dir/libsrc2/free.c.o CMakeFiles/minc2.dir/libsrc2/grpattr.c.o CMakeFiles/minc2.dir/libsrc2/hyper.c.o CMakeFiles/minc2.dir/libsrc2/label.c.o CMakeFiles/minc2.dir/libsrc2/m2util.c.o CMakeFiles/minc2.dir/libsrc2/record.c.o CMakeFiles/minc2.dir/libsrc2/slice.c.o CMakeFiles/minc2.dir/libsrc2/valid.c.o CMakeFiles/minc2.dir/libsrc2/volprops.c.o CMakeFiles/minc2.dir/libsrc2/volume.c.o CMakeFiles/minc2.dir/libcommon/minc2_error.c.o CMakeFiles/minc2.dir/libcommon/minc_config.c.o CMakeFiles/minc2.dir/libcommon/minc_error.c.o CMakeFiles/minc2.dir/libcommon/ParseArgv.c.o CMakeFiles/minc2.dir/libcommon/read_file_names.c.o CMakeFiles/minc2.dir/libcommon/restructure.c.o CMakeFiles/minc2.dir/libcommon/time_stamp.c.o CMakeFiles/minc2.dir/libsrc/dim_conversion.c.o CMakeFiles/minc2.dir/libsrc/image_conversion.c.o CMakeFiles/minc2.dir/libsrc/minc_convenience.c.o CMakeFiles/minc2.dir/libsrc/nd_loop.c.o CMakeFiles/minc2.dir/libsrc/netcdf_convenience.c.o CMakeFiles/minc2.dir/libsrc/value_conversion.c.o CMakeFiles/minc2.dir/libsrc/voxel_loop.c.o CMakeFiles/minc2.dir/libsrc/hdf_convenience.c.o CMakeFiles/minc2.dir/libsrc/minc_compat.c.o CMakeFiles/minc2.dir/libsrc/minc_simple.c.o CMakeFiles/minc2.dir/libsrc/minc_format_convert.c.o CMakeFiles/minc2.dir/volume_io/Geometry/colour.c.o CMakeFiles/minc2.dir/volume_io/Geometry/colour_def.c.o CMakeFiles/minc2.dir/volume_io/Geometry/gaussian.c.o CMakeFiles/minc2.dir/volume_io/Geometry/inverse.c.o CMakeFiles/minc2.dir/volume_io/Geometry/newton.c.o CMakeFiles/minc2.dir/volume_io/Geometry/points.c.o CMakeFiles/minc2.dir/volume_io/Geometry/splines.c.o CMakeFiles/minc2.dir/volume_io/Geometry/tensors.c.o CMakeFiles/minc2.dir/volume_io/Geometry/transforms.c.o CMakeFiles/minc2.dir/volume_io/MNI_formats/gen_xf_io.c.o CMakeFiles/minc2.dir/volume_io/MNI_formats/gen_xfs.c.o CMakeFiles/minc2.dir/volume_io/MNI_formats/grid_transforms.c.o CMakeFiles/minc2.dir/volume_io/MNI_formats/mni_io.c.o CMakeFiles/minc2.dir/volume_io/MNI_formats/tag_points.c.o CMakeFiles/minc2.dir/volume_io/MNI_formats/thin_plate_spline.c.o CMakeFiles/minc2.dir/volume_io/Prog_utils/alloc.c.o CMakeFiles/minc2.dir/volume_io/Prog_utils/alloc_check.c.o CMakeFiles/minc2.dir/volume_io/Prog_utils/arrays.c.o CMakeFiles/minc2.dir/volume_io/Prog_utils/files.c.o CMakeFiles/minc2.dir/volume_io/Prog_utils/print.c.o CMakeFiles/minc2.dir/volume_io/Prog_utils/progress.c.o CMakeFiles/minc2.dir/volume_io/Prog_utils/string.c.o CMakeFiles/minc2.dir/volume_io/Prog_utils/time.c.o CMakeFiles/minc2.dir/volume_io/Volumes/evaluate.c.o CMakeFiles/minc2.dir/volume_io/Volumes/get_hyperslab.c.o CMakeFiles/minc2.dir/volume_io/Volumes/input_free.c.o CMakeFiles/minc2.dir/volume_io/Volumes/input_mnc.c.o CMakeFiles/minc2.dir/volume_io/Volumes/input_volume.c.o CMakeFiles/minc2.dir/volume_io/Volumes/multidim_arrays.c.o CMakeFiles/minc2.dir/volume_io/Volumes/output_mnc.c.o CMakeFiles/minc2.dir/volume_io/Volumes/output_volume.c.o CMakeFiles/minc2.dir/volume_io/Volumes/set_hyperslab.c.o CMakeFiles/minc2.dir/volume_io/Volumes/volume_cache.c.o CMakeFiles/minc2.dir/volume_io/Volumes/volumes.c.o CMakeFiles/minc2.dir/volume_io/Volumes/input_mnc2.c.o CMakeFiles/minc2.dir/volume_io/Volumes/output_mnc2.c.o -Wl,-rpath,/usr/lib/arm-linux-gnueabihf/hdf5/serial: /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lrt -lnetcdf -lm -ldl -lnetcdf -ldl -lm -lrt -lnetcdf -lm -ldl -lnetcdf -lm -ldl /build/libminc-2.4.03/volume_io/Volumes/output_mnc2.c: In function 'output_the_volume2': /build/libminc-2.4.03/volume_io/Volumes/output_mnc2.c:1246:77: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 1246 | miset_slice_range(file->minc2id,(const misize_t*)file_indices,file->n_file_dimensions,real_max,real_min); | ~~~~^~~~~~~~~~~~~~~~~~~ -/usr/bin/cmake -E cmake_symlink_library libminc2.so.5.2.0 libminc2.so.5.2.0 libminc2.so -make[3]: Leaving directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' -[ 59%] Built target minc2 -make -f ezminc/CMakeFiles/minc_io.dir/build.make ezminc/CMakeFiles/minc_io.dir/depend -make[3]: Entering directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' -cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/ezminc /build/libminc-2.4.03/obj-arm-linux-gnueabihf /build/libminc-2.4.03/obj-arm-linux-gnueabihf/ezminc /build/libminc-2.4.03/obj-arm-linux-gnueabihf/ezminc/CMakeFiles/minc_io.dir/DependInfo.cmake --color= -Dependee "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/ezminc/CMakeFiles/minc_io.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/ezminc/CMakeFiles/minc_io.dir/depend.internal". -Dependee "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/ezminc/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/ezminc/CMakeFiles/minc_io.dir/depend.internal". -Scanning dependencies of target minc_io -make[3]: Leaving directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' -make -f ezminc/CMakeFiles/minc_io.dir/build.make ezminc/CMakeFiles/minc_io.dir/build -make[3]: Entering directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' [ 60%] Building CXX object ezminc/CMakeFiles/minc_io.dir/minc_1_simple_rw.cpp.o cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/ezminc && /usr/bin/c++ -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc_io_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc_io.dir/minc_1_simple_rw.cpp.o -c /build/libminc-2.4.03/ezminc/minc_1_simple_rw.cpp -[ 60%] Building CXX object ezminc/CMakeFiles/minc_io.dir/minc_1_rw.cpp.o -cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/ezminc && /usr/bin/c++ -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc_io_EXPORTS -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -o CMakeFiles/minc_io.dir/minc_1_rw.cpp.o -c /build/libminc-2.4.03/ezminc/minc_1_rw.cpp +In file included from /usr/include/c++/10/vector:72, + from /build/libminc-2.4.03/ezminc/minc_1_rw.h:18, + from /build/libminc-2.4.03/ezminc/minc_1_rw.cpp:23: +/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = double; _Alloc = std::allocator]': +/usr/include/c++/10/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector::iterator' changed in GCC 7.1 + 509 | vector<_Tp, _Alloc>:: + | ^~~~~~~~~~~~~~~~~~~ make -f testdir/CMakeFiles/minc2-read-metadata.dir/build.make testdir/CMakeFiles/minc2-read-metadata.dir/depend make[3]: Entering directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-arm-linux-gnueabihf /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc2-read-metadata.dir/DependInfo.cmake --color= +In file included from /usr/include/c++/10/vector:67, + from /build/libminc-2.4.03/ezminc/minc_1_rw.h:18, + from /build/libminc-2.4.03/ezminc/minc_1_rw.cpp:23: +/usr/include/c++/10/bits/stl_vector.h: In member function 'void minc::minc_1_reader::open(const char*, bool, bool, bool)': +/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 + 960 | _M_fill_insert(end(), __new_size - size(), __x); + | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Dependee "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc2-read-metadata.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc2-read-metadata.dir/depend.internal". Dependee "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc2-read-metadata.dir/depend.internal". Scanning dependencies of target minc2-read-metadata @@ -3929,25 +4014,27 @@ make[3]: Entering directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' [ 60%] Building C object testdir/CMakeFiles/minc2-read-metadata.dir/minc2-read-metadata.c.o cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-read-metadata.dir/minc2-read-metadata.c.o -c /build/libminc-2.4.03/testdir/minc2-read-metadata.c -[ 61%] Linking C executable minc2-read-metadata -cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-read-metadata.dir/link.txt --verbose=1 -/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-read-metadata.dir/minc2-read-metadata.c.o -o minc2-read-metadata -Wl,-rpath,/build/libminc-2.4.03/obj-arm-linux-gnueabihf:/usr/lib/arm-linux-gnueabihf/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf +[ 61%] Linking C static library libminc2_static.a +/usr/bin/cmake -P CMakeFiles/minc2_static.dir/cmake_clean_target.cmake +/usr/bin/cmake -E cmake_link_script CMakeFiles/minc2_static.dir/link.txt --verbose=1 +/usr/bin/ar qc libminc2_static.a CMakeFiles/minc2_static.dir/libsrc2/convert.c.o CMakeFiles/minc2_static.dir/libsrc2/datatype.c.o CMakeFiles/minc2_static.dir/libsrc2/dimension.c.o CMakeFiles/minc2_static.dir/libsrc2/free.c.o CMakeFiles/minc2_static.dir/libsrc2/grpattr.c.o CMakeFiles/minc2_static.dir/libsrc2/hyper.c.o CMakeFiles/minc2_static.dir/libsrc2/label.c.o CMakeFiles/minc2_static.dir/libsrc2/m2util.c.o CMakeFiles/minc2_static.dir/libsrc2/record.c.o CMakeFiles/minc2_static.dir/libsrc2/slice.c.o CMakeFiles/minc2_static.dir/libsrc2/valid.c.o CMakeFiles/minc2_static.dir/libsrc2/volprops.c.o CMakeFiles/minc2_static.dir/libsrc2/volume.c.o CMakeFiles/minc2_static.dir/libcommon/minc2_error.c.o CMakeFiles/minc2_static.dir/libcommon/minc_config.c.o CMakeFiles/minc2_static.dir/libcommon/minc_error.c.o CMakeFiles/minc2_static.dir/libcommon/ParseArgv.c.o CMakeFiles/minc2_static.dir/libcommon/read_file_names.c.o CMakeFiles/minc2_static.dir/libcommon/restructure.c.o CMakeFiles/minc2_static.dir/libcommon/time_stamp.c.o CMakeFiles/minc2_static.dir/libsrc/dim_conversion.c.o CMakeFiles/minc2_static.dir/libsrc/image_conversion.c.o CMakeFiles/minc2_static.dir/libsrc/minc_convenience.c.o CMakeFiles/minc2_static.dir/libsrc/nd_loop.c.o CMakeFiles/minc2_static.dir/libsrc/netcdf_convenience.c.o CMakeFiles/minc2_static.dir/libsrc/value_conversion.c.o CMakeFiles/minc2_static.dir/libsrc/voxel_loop.c.o CMakeFiles/minc2_static.dir/libsrc/hdf_convenience.c.o CMakeFiles/minc2_static.dir/libsrc/minc_compat.c.o CMakeFiles/minc2_static.dir/libsrc/minc_simple.c.o CMakeFiles/minc2_static.dir/libsrc/minc_format_convert.c.o CMakeFiles/minc2_static.dir/volume_io/Geometry/colour.c.o CMakeFiles/minc2_static.dir/volume_io/Geometry/colour_def.c.o CMakeFiles/minc2_static.dir/volume_io/Geometry/gaussian.c.o CMakeFiles/minc2_static.dir/volume_io/Geometry/inverse.c.o CMakeFiles/minc2_static.dir/volume_io/Geometry/newton.c.o CMakeFiles/minc2_static.dir/volume_io/Geometry/points.c.o CMakeFiles/minc2_static.dir/volume_io/Geometry/splines.c.o CMakeFiles/minc2_static.dir/volume_io/Geometry/tensors.c.o CMakeFiles/minc2_static.dir/volume_io/Geometry/transforms.c.o CMakeFiles/minc2_static.dir/volume_io/MNI_formats/gen_xf_io.c.o CMakeFiles/minc2_static.dir/volume_io/MNI_formats/gen_xfs.c.o CMakeFiles/minc2_static.dir/volume_io/MNI_formats/grid_transforms.c.o CMakeFiles/minc2_static.dir/volume_io/MNI_formats/mni_io.c.o CMakeFiles/minc2_static.dir/volume_io/MNI_formats/tag_points.c.o CMakeFiles/minc2_static.dir/volume_io/MNI_formats/thin_plate_spline.c.o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/alloc.c.o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/alloc_check.c.o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/arrays.c.o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/files.c.o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/print.c.o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/progress.c.o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/string.c.o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/time.c.o CMakeFiles/minc2_static.dir/volume_io/Volumes/evaluate.c.o CMakeFiles/minc2_static.dir/volume_io/Volumes/get_hyperslab.c.o CMakeFiles/minc2_static.dir/volume_io/Volumes/input_free.c.o CMakeFiles/minc2_static.dir/volume_io/Volumes/input_mnc.c.o CMakeFiles/minc2_static.dir/volume_io/Volumes/input_volume.c.o CMakeFiles/minc2_static.dir/volume_io/Volumes/multidim_arrays.c.o CMakeFiles/minc2_static.dir/volume_io/Volumes/output_mnc.c.o CMakeFiles/minc2_static.dir/volume_io/Volumes/output_volume.c.o CMakeFiles/minc2_static.dir/volume_io/Volumes/set_hyperslab.c.o CMakeFiles/minc2_static.dir/volume_io/Volumes/volume_cache.c.o CMakeFiles/minc2_static.dir/volume_io/Volumes/volumes.c.o CMakeFiles/minc2_static.dir/volume_io/Volumes/input_mnc2.c.o CMakeFiles/minc2_static.dir/volume_io/Volumes/output_mnc2.c.o +/usr/bin/ranlib libminc2_static.a +make[3]: Leaving directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' +[ 61%] Built target minc2_static make -f testdir/CMakeFiles/minc2-read-rgb.dir/build.make testdir/CMakeFiles/minc2-read-rgb.dir/depend make[3]: Entering directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-arm-linux-gnueabihf /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc2-read-rgb.dir/DependInfo.cmake --color= Dependee "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc2-read-rgb.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc2-read-rgb.dir/depend.internal". Dependee "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc2-read-rgb.dir/depend.internal". +[ 62%] Linking C executable minc2-read-metadata +cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-read-metadata.dir/link.txt --verbose=1 Scanning dependencies of target minc2-read-rgb make[3]: Leaving directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' make -f testdir/CMakeFiles/minc2-read-rgb.dir/build.make testdir/CMakeFiles/minc2-read-rgb.dir/build make[3]: Entering directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' -[ 61%] Building C object testdir/CMakeFiles/minc2-read-rgb.dir/minc2-read-rgb.c.o +/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-read-metadata.dir/minc2-read-metadata.c.o -o minc2-read-metadata -Wl,-rpath,/build/libminc-2.4.03/obj-arm-linux-gnueabihf:/usr/lib/arm-linux-gnueabihf/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf +[ 62%] Building C object testdir/CMakeFiles/minc2-read-rgb.dir/minc2-read-rgb.c.o cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-read-rgb.dir/minc2-read-rgb.c.o -c /build/libminc-2.4.03/testdir/minc2-read-rgb.c -make[3]: Leaving directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' -[ 61%] Built target minc2-read-metadata -make -f testdir/CMakeFiles/minc2-volprops-test.dir/build.make testdir/CMakeFiles/minc2-volprops-test.dir/depend -make[3]: Entering directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' -cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-arm-linux-gnueabihf /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc2-volprops-test.dir/DependInfo.cmake --color= /build/libminc-2.4.03/testdir/minc2-read-rgb.c: In function 'calculate_mean_f': /build/libminc-2.4.03/testdir/minc2-read-rgb.c:23:13: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'double' may change value [-Wconversion] 23 | return avg/length; @@ -4033,32 +4120,49 @@ /build/libminc-2.4.03/testdir/minc2-read-rgb.c:475:57: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'size_t' {aka 'unsigned int'} may change value [-Wconversion] 475 | d_full=malloc(sizeof(double)*my_sizes[0]*my_sizes[1]*my_sizes[2]); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ +make[3]: Leaving directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' +make -f testdir/CMakeFiles/minc2-volprops-test.dir/build.make testdir/CMakeFiles/minc2-volprops-test.dir/depend +make[3]: Entering directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' +cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-arm-linux-gnueabihf /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc2-volprops-test.dir/DependInfo.cmake --color= +[ 62%] Built target minc2-read-metadata +make -f testdir/CMakeFiles/minc2-vector_dimension-test.dir/build.make testdir/CMakeFiles/minc2-vector_dimension-test.dir/depend +make[3]: Entering directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' +cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-arm-linux-gnueabihf /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc2-vector_dimension-test.dir/DependInfo.cmake --color= Dependee "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc2-volprops-test.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc2-volprops-test.dir/depend.internal". Dependee "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc2-volprops-test.dir/depend.internal". Scanning dependencies of target minc2-volprops-test make[3]: Leaving directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' make -f testdir/CMakeFiles/minc2-volprops-test.dir/build.make testdir/CMakeFiles/minc2-volprops-test.dir/build make[3]: Entering directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' -[ 61%] Building C object testdir/CMakeFiles/minc2-volprops-test.dir/minc2-volprops-test.c.o -cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-volprops-test.dir/minc2-volprops-test.c.o -c /build/libminc-2.4.03/testdir/minc2-volprops-test.c -[ 62%] Linking C static library libminc2_static.a -/usr/bin/cmake -P CMakeFiles/minc2_static.dir/cmake_clean_target.cmake -/usr/bin/cmake -E cmake_link_script CMakeFiles/minc2_static.dir/link.txt --verbose=1 -make -f testdir/CMakeFiles/minc2-vector_dimension-test.dir/build.make testdir/CMakeFiles/minc2-vector_dimension-test.dir/depend -make[3]: Entering directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' -cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-arm-linux-gnueabihf /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc2-vector_dimension-test.dir/DependInfo.cmake --color= -/usr/bin/ar qc libminc2_static.a CMakeFiles/minc2_static.dir/libsrc2/convert.c.o CMakeFiles/minc2_static.dir/libsrc2/datatype.c.o CMakeFiles/minc2_static.dir/libsrc2/dimension.c.o CMakeFiles/minc2_static.dir/libsrc2/free.c.o CMakeFiles/minc2_static.dir/libsrc2/grpattr.c.o CMakeFiles/minc2_static.dir/libsrc2/hyper.c.o CMakeFiles/minc2_static.dir/libsrc2/label.c.o CMakeFiles/minc2_static.dir/libsrc2/m2util.c.o CMakeFiles/minc2_static.dir/libsrc2/record.c.o CMakeFiles/minc2_static.dir/libsrc2/slice.c.o CMakeFiles/minc2_static.dir/libsrc2/valid.c.o CMakeFiles/minc2_static.dir/libsrc2/volprops.c.o CMakeFiles/minc2_static.dir/libsrc2/volume.c.o CMakeFiles/minc2_static.dir/libcommon/minc2_error.c.o CMakeFiles/minc2_static.dir/libcommon/minc_config.c.o CMakeFiles/minc2_static.dir/libcommon/minc_error.c.o CMakeFiles/minc2_static.dir/libcommon/ParseArgv.c.o CMakeFiles/minc2_static.dir/libcommon/read_file_names.c.o CMakeFiles/minc2_static.dir/libcommon/restructure.c.o CMakeFiles/minc2_static.dir/libcommon/time_stamp.c.o CMakeFiles/minc2_static.dir/libsrc/dim_conversion.c.o CMakeFiles/minc2_static.dir/libsrc/image_conversion.c.o CMakeFiles/minc2_static.dir/libsrc/minc_convenience.c.o CMakeFiles/minc2_static.dir/libsrc/nd_loop.c.o CMakeFiles/minc2_static.dir/libsrc/netcdf_convenience.c.o CMakeFiles/minc2_static.dir/libsrc/value_conversion.c.o CMakeFiles/minc2_static.dir/libsrc/voxel_loop.c.o CMakeFiles/minc2_static.dir/libsrc/hdf_convenience.c.o CMakeFiles/minc2_static.dir/libsrc/minc_compat.c.o CMakeFiles/minc2_static.dir/libsrc/minc_simple.c.o CMakeFiles/minc2_static.dir/libsrc/minc_format_convert.c.o CMakeFiles/minc2_static.dir/volume_io/Geometry/colour.c.o CMakeFiles/minc2_static.dir/volume_io/Geometry/colour_def.c.o CMakeFiles/minc2_static.dir/volume_io/Geometry/gaussian.c.o CMakeFiles/minc2_static.dir/volume_io/Geometry/inverse.c.o CMakeFiles/minc2_static.dir/volume_io/Geometry/newton.c.o CMakeFiles/minc2_static.dir/volume_io/Geometry/points.c.o CMakeFiles/minc2_static.dir/volume_io/Geometry/splines.c.o CMakeFiles/minc2_static.dir/volume_io/Geometry/tensors.c.o CMakeFiles/minc2_static.dir/volume_io/Geometry/transforms.c.o CMakeFiles/minc2_static.dir/volume_io/MNI_formats/gen_xf_io.c.o CMakeFiles/minc2_static.dir/volume_io/MNI_formats/gen_xfs.c.o CMakeFiles/minc2_static.dir/volume_io/MNI_formats/grid_transforms.c.o CMakeFiles/minc2_static.dir/volume_io/MNI_formats/mni_io.c.o CMakeFiles/minc2_static.dir/volume_io/MNI_formats/tag_points.c.o CMakeFiles/minc2_static.dir/volume_io/MNI_formats/thin_plate_spline.c.o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/alloc.c.o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/alloc_check.c.o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/arrays.c.o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/files.c.o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/print.c.o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/progress.c.o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/string.c.o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/time.c.o CMakeFiles/minc2_static.dir/volume_io/Volumes/evaluate.c.o CMakeFiles/minc2_static.dir/volume_io/Volumes/get_hyperslab.c.o CMakeFiles/minc2_static.dir/volume_io/Volumes/input_free.c.o CMakeFiles/minc2_static.dir/volume_io/Volumes/input_mnc.c.o CMakeFiles/minc2_static.dir/volume_io/Volumes/input_volume.c.o CMakeFiles/minc2_static.dir/volume_io/Volumes/multidim_arrays.c.o CMakeFiles/minc2_static.dir/volume_io/Volumes/output_mnc.c.o CMakeFiles/minc2_static.dir/volume_io/Volumes/output_volume.c.o CMakeFiles/minc2_static.dir/volume_io/Volumes/set_hyperslab.c.o CMakeFiles/minc2_static.dir/volume_io/Volumes/volume_cache.c.o CMakeFiles/minc2_static.dir/volume_io/Volumes/volumes.c.o CMakeFiles/minc2_static.dir/volume_io/Volumes/input_mnc2.c.o CMakeFiles/minc2_static.dir/volume_io/Volumes/output_mnc2.c.o Dependee "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc2-vector_dimension-test.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc2-vector_dimension-test.dir/depend.internal". Dependee "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc2-vector_dimension-test.dir/depend.internal". Scanning dependencies of target minc2-vector_dimension-test make[3]: Leaving directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' make -f testdir/CMakeFiles/minc2-vector_dimension-test.dir/build.make testdir/CMakeFiles/minc2-vector_dimension-test.dir/build make[3]: Entering directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' -/usr/bin/ranlib libminc2_static.a +[ 62%] Building C object testdir/CMakeFiles/minc2-volprops-test.dir/minc2-volprops-test.c.o +cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-volprops-test.dir/minc2-volprops-test.c.o -c /build/libminc-2.4.03/testdir/minc2-volprops-test.c [ 63%] Building C object testdir/CMakeFiles/minc2-vector_dimension-test.dir/minc2-vector_dimension-test.c.o cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-vector_dimension-test.dir/minc2-vector_dimension-test.c.o -c /build/libminc-2.4.03/testdir/minc2-vector_dimension-test.c +[ 63%] Linking CXX shared library libminc_io.so +/build/libminc-2.4.03/testdir/minc2-vector_dimension-test.c: In function 'main': +/build/libminc-2.4.03/testdir/minc2-vector_dimension-test.c:131:17: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 131 | coords[3] = i; + | ^ +/build/libminc-2.4.03/testdir/minc2-vector_dimension-test.c:166:17: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 166 | coords[0] = i; + | ^ +cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/ezminc && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc_io.dir/link.txt --verbose=1 +/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libminc_io.so.5.2.0 -o libminc_io.so.5.2.0 CMakeFiles/minc_io.dir/minc_1_rw.cpp.o CMakeFiles/minc_io.dir/minc_1_simple_rw.cpp.o -Wl,-rpath,/build/libminc-2.4.03/obj-arm-linux-gnueabihf:/usr/lib/arm-linux-gnueabihf/hdf5/serial: ../libminc2.so.5.2.0 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf +[ 64%] Linking C executable minc2-volprops-test +cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-volprops-test.dir/link.txt --verbose=1 +[ 64%] Linking C executable minc2-vector_dimension-test +cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-vector_dimension-test.dir/link.txt --verbose=1 +/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-volprops-test.dir/minc2-volprops-test.c.o -o minc2-volprops-test -Wl,-rpath,/build/libminc-2.4.03/obj-arm-linux-gnueabihf:/usr/lib/arm-linux-gnueabihf/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf +/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-vector_dimension-test.dir/minc2-vector_dimension-test.c.o -o minc2-vector_dimension-test -Wl,-rpath,/build/libminc-2.4.03/obj-arm-linux-gnueabihf:/usr/lib/arm-linux-gnueabihf/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf +cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/ezminc && /usr/bin/cmake -E cmake_symlink_library libminc_io.so.5.2.0 libminc_io.so.5.2.0 libminc_io.so make[3]: Leaving directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' -[ 63%] Built target minc2_static +[ 64%] Built target minc_io make -f testdir/CMakeFiles/minc2-slice-test.dir/build.make testdir/CMakeFiles/minc2-slice-test.dir/depend make[3]: Entering directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-arm-linux-gnueabihf /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc2-slice-test.dir/DependInfo.cmake --color= @@ -4068,18 +4172,19 @@ make[3]: Leaving directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' make -f testdir/CMakeFiles/minc2-slice-test.dir/build.make testdir/CMakeFiles/minc2-slice-test.dir/build make[3]: Entering directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' -/build/libminc-2.4.03/testdir/minc2-vector_dimension-test.c: In function 'main': -/build/libminc-2.4.03/testdir/minc2-vector_dimension-test.c:131:17: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 131 | coords[3] = i; - | ^ -/build/libminc-2.4.03/testdir/minc2-vector_dimension-test.c:166:17: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 166 | coords[0] = i; - | ^ -[ 64%] Building C object testdir/CMakeFiles/minc2-slice-test.dir/minc2-slice-test.c.o +[ 65%] Building C object testdir/CMakeFiles/minc2-slice-test.dir/minc2-slice-test.c.o cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-slice-test.dir/minc2-slice-test.c.o -c /build/libminc-2.4.03/testdir/minc2-slice-test.c -[ 65%] Linking C executable minc2-volprops-test -cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-volprops-test.dir/link.txt --verbose=1 -/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-volprops-test.dir/minc2-volprops-test.c.o -o minc2-volprops-test -Wl,-rpath,/build/libminc-2.4.03/obj-arm-linux-gnueabihf:/usr/lib/arm-linux-gnueabihf/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf +make[3]: Leaving directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' +[ 65%] Built target minc2-vector_dimension-test +make -f testdir/CMakeFiles/minc2-record-test.dir/build.make testdir/CMakeFiles/minc2-record-test.dir/depend +make[3]: Entering directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' +cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-arm-linux-gnueabihf /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc2-record-test.dir/DependInfo.cmake --color= +make[3]: Leaving directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' +[ 65%] Linking C executable minc2-read-rgb +cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-read-rgb.dir/link.txt --verbose=1 +Dependee "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc2-record-test.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc2-record-test.dir/depend.internal". +Dependee "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc2-record-test.dir/depend.internal". +/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-read-rgb.dir/minc2-read-rgb.c.o -o minc2-read-rgb -Wl,-rpath,/build/libminc-2.4.03/obj-arm-linux-gnueabihf:/usr/lib/arm-linux-gnueabihf/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf /build/libminc-2.4.03/testdir/minc2-slice-test.c: In function 'main': /build/libminc-2.4.03/testdir/minc2-slice-test.c:29:21: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 29 | coords[0] = i; /*Z*/ @@ -4090,29 +4195,25 @@ /build/libminc-2.4.03/testdir/minc2-slice-test.c:31:21: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 31 | coords[2] = rand()%CY; /*Y*/ | ^~~~ -[ 65%] Linking C executable minc2-slice-test -cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-slice-test.dir/link.txt --verbose=1 -make[3]: Leaving directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' -[ 65%] Linking C executable minc2-vector_dimension-test -cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-vector_dimension-test.dir/link.txt --verbose=1 -/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-slice-test.dir/minc2-slice-test.c.o -o minc2-slice-test -Wl,-rpath,/build/libminc-2.4.03/obj-arm-linux-gnueabihf:/usr/lib/arm-linux-gnueabihf/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf [ 65%] Built target minc2-volprops-test -make -f testdir/CMakeFiles/minc2-record-test.dir/build.make testdir/CMakeFiles/minc2-record-test.dir/depend -make[3]: Entering directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' -cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-arm-linux-gnueabihf /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc2-record-test.dir/DependInfo.cmake --color= -/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-vector_dimension-test.dir/minc2-vector_dimension-test.c.o -o minc2-vector_dimension-test -Wl,-rpath,/build/libminc-2.4.03/obj-arm-linux-gnueabihf:/usr/lib/arm-linux-gnueabihf/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf -Dependee "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc2-record-test.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc2-record-test.dir/depend.internal". -Dependee "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc2-record-test.dir/depend.internal". Scanning dependencies of target minc2-record-test +make -f testdir/CMakeFiles/minc2-leak-test.dir/build.make testdir/CMakeFiles/minc2-leak-test.dir/depend make[3]: Leaving directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' make -f testdir/CMakeFiles/minc2-record-test.dir/build.make testdir/CMakeFiles/minc2-record-test.dir/build make[3]: Entering directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' -[ 65%] Linking C executable minc2-read-rgb -cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-read-rgb.dir/link.txt --verbose=1 +cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-arm-linux-gnueabihf /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc2-leak-test.dir/DependInfo.cmake --color= +make[3]: Entering directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' [ 66%] Building C object testdir/CMakeFiles/minc2-record-test.dir/minc2-record-test.c.o cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-record-test.dir/minc2-record-test.c.o -c /build/libminc-2.4.03/testdir/minc2-record-test.c -/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-read-rgb.dir/minc2-read-rgb.c.o -o minc2-read-rgb -Wl,-rpath,/build/libminc-2.4.03/obj-arm-linux-gnueabihf:/usr/lib/arm-linux-gnueabihf/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf +Dependee "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc2-leak-test.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc2-leak-test.dir/depend.internal". +Dependee "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc2-leak-test.dir/depend.internal". +Scanning dependencies of target minc2-leak-test make[3]: Leaving directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' +make -f testdir/CMakeFiles/minc2-leak-test.dir/build.make testdir/CMakeFiles/minc2-leak-test.dir/build +make[3]: Entering directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' +[ 66%] Building C object testdir/CMakeFiles/minc2-leak-test.dir/minc2-leak-test.c.o +cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-leak-test.dir/minc2-leak-test.c.o -c /build/libminc-2.4.03/testdir/minc2-leak-test.c +[ 66%] Linking C executable minc2-slice-test /build/libminc-2.4.03/testdir/minc2-record-test.c: In function 'main': /build/libminc-2.4.03/testdir/minc2-record-test.c:85:29: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 85 | coords[0] = i; @@ -4132,45 +4233,46 @@ /build/libminc-2.4.03/testdir/minc2-record-test.c:107:29: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 107 | coords[2] = k; | ^ -[ 66%] Built target minc2-slice-test -make -f testdir/CMakeFiles/minc2-leak-test.dir/build.make testdir/CMakeFiles/minc2-leak-test.dir/depend -make[3]: Entering directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' -cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-arm-linux-gnueabihf /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc2-leak-test.dir/DependInfo.cmake --color= +cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-slice-test.dir/link.txt --verbose=1 +/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-slice-test.dir/minc2-slice-test.c.o -o minc2-slice-test -Wl,-rpath,/build/libminc-2.4.03/obj-arm-linux-gnueabihf:/usr/lib/arm-linux-gnueabihf/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf +/build/libminc-2.4.03/testdir/minc2-leak-test.c: In function 'hdf5_check_objects': +/build/libminc-2.4.03/testdir/minc2-leak-test.c:58:21: warning: conversion to 'unsigned int' from 'ssize_t' {aka 'int'} may change the sign of the result [-Wsign-conversion] + 58 | objs = malloc(cnt * sizeof(hid_t)); + | ^ +/build/libminc-2.4.03/testdir/minc2-leak-test.c:60:46: warning: conversion to 'size_t' {aka 'unsigned int'} from 'ssize_t' {aka 'int'} may change the sign of the result [-Wsign-conversion] + 60 | howmany = H5Fget_obj_ids(fid, H5F_OBJ_ALL, cnt, objs); + | ^~~ +/build/libminc-2.4.03/testdir/minc2-leak-test.c: In function 'leak_loop': +/build/libminc-2.4.03/testdir/minc2-leak-test.c:113:40: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + 113 | buffer = (double *) malloc( n_voxels * sizeof(double)); + | ^ +/build/libminc-2.4.03/testdir/minc2-leak-test.c: In function 'create_test_image': +/build/libminc-2.4.03/testdir/minc2-leak-test.c:235:41: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + 235 | buf = ( uint16_t * ) malloc ( nvoxels * sizeof ( uint16_t ) ); + | ^ +/build/libminc-2.4.03/testdir/minc2-leak-test.c:253:16: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 253 | start[0] = i; + | ^ +/build/libminc-2.4.03/testdir/minc2-leak-test.c: In function 'main': +/build/libminc-2.4.03/testdir/minc2-leak-test.c:306:46: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 306 | result = miget_dimension_sizes(dimensions, ndims, sizes); + | ^~~~~ make[3]: Leaving directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' -Dependee "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc2-leak-test.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc2-leak-test.dir/depend.internal". -Dependee "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc2-leak-test.dir/depend.internal". -[ 66%] Built target minc2-vector_dimension-test +[ 66%] Built target minc2-read-rgb make -f testdir/CMakeFiles/minc2-multires-test.dir/build.make testdir/CMakeFiles/minc2-multires-test.dir/depend -Scanning dependencies of target minc2-leak-test -make[3]: Leaving directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' -make -f testdir/CMakeFiles/minc2-leak-test.dir/build.make testdir/CMakeFiles/minc2-leak-test.dir/build +[ 66%] Linking C executable minc2-record-test +cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-record-test.dir/link.txt --verbose=1 make[3]: Entering directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-arm-linux-gnueabihf /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc2-multires-test.dir/DependInfo.cmake --color= -make[3]: Entering directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' Dependee "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc2-multires-test.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc2-multires-test.dir/depend.internal". Dependee "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc2-multires-test.dir/depend.internal". -[ 66%] Building C object testdir/CMakeFiles/minc2-leak-test.dir/minc2-leak-test.c.o -cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-leak-test.dir/minc2-leak-test.c.o -c /build/libminc-2.4.03/testdir/minc2-leak-test.c -make[3]: Leaving directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' +/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-record-test.dir/minc2-record-test.c.o -o minc2-record-test -Wl,-rpath,/build/libminc-2.4.03/obj-arm-linux-gnueabihf:/usr/lib/arm-linux-gnueabihf/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf Scanning dependencies of target minc2-multires-test make[3]: Leaving directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' make -f testdir/CMakeFiles/minc2-multires-test.dir/build.make testdir/CMakeFiles/minc2-multires-test.dir/build make[3]: Entering directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' [ 66%] Building C object testdir/CMakeFiles/minc2-multires-test.dir/minc2-multires-test.c.o cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-multires-test.dir/minc2-multires-test.c.o -c /build/libminc-2.4.03/testdir/minc2-multires-test.c -[ 66%] Built target minc2-read-rgb -make -f testdir/CMakeFiles/volume_test.dir/build.make testdir/CMakeFiles/volume_test.dir/depend -make[3]: Entering directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' -cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-arm-linux-gnueabihf /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/volume_test.dir/DependInfo.cmake --color= -Dependee "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/volume_test.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/volume_test.dir/depend.internal". -Dependee "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/volume_test.dir/depend.internal". -[ 66%] Linking C executable minc2-record-test -cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-record-test.dir/link.txt --verbose=1 -Scanning dependencies of target volume_test -make[3]: Leaving directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' -make -f testdir/CMakeFiles/volume_test.dir/build.make testdir/CMakeFiles/volume_test.dir/build -make[3]: Entering directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' -/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-record-test.dir/minc2-record-test.c.o -o minc2-record-test -Wl,-rpath,/build/libminc-2.4.03/obj-arm-linux-gnueabihf:/usr/lib/arm-linux-gnueabihf/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf /build/libminc-2.4.03/testdir/minc2-multires-test.c: In function 'main': /build/libminc-2.4.03/testdir/minc2-multires-test.c:79:29: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 79 | coords[0] = i; @@ -4184,56 +4286,38 @@ /build/libminc-2.4.03/testdir/minc2-multires-test.c:83:25: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 83 | voxel = i*10000 + j*100 + k; | ^ -[ 66%] Building C object testdir/CMakeFiles/volume_test.dir/volume_test.c.o +make[3]: Leaving directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' +[ 67%] Linking C executable minc2-leak-test +cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-leak-test.dir/link.txt --verbose=1 +/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-leak-test.dir/minc2-leak-test.c.o -o minc2-leak-test -Wl,-rpath,/build/libminc-2.4.03/obj-arm-linux-gnueabihf:/usr/lib/arm-linux-gnueabihf/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf +[ 67%] Built target minc2-slice-test +make -f testdir/CMakeFiles/volume_test.dir/build.make testdir/CMakeFiles/volume_test.dir/depend +make[3]: Entering directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' +cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-arm-linux-gnueabihf /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/volume_test.dir/DependInfo.cmake --color= +Dependee "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/volume_test.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/volume_test.dir/depend.internal". +Dependee "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/volume_test.dir/depend.internal". +Scanning dependencies of target volume_test +make[3]: Leaving directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' +make -f testdir/CMakeFiles/volume_test.dir/build.make testdir/CMakeFiles/volume_test.dir/build +make[3]: Entering directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' +[ 67%] Building C object testdir/CMakeFiles/volume_test.dir/volume_test.c.o cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/volume_test.dir/volume_test.c.o -c /build/libminc-2.4.03/testdir/volume_test.c -/build/libminc-2.4.03/testdir/minc2-leak-test.c: In function 'hdf5_check_objects': -/build/libminc-2.4.03/testdir/minc2-leak-test.c:58:21: warning: conversion to 'unsigned int' from 'ssize_t' {aka 'int'} may change the sign of the result [-Wsign-conversion] - 58 | objs = malloc(cnt * sizeof(hid_t)); - | ^ -/build/libminc-2.4.03/testdir/minc2-leak-test.c:60:46: warning: conversion to 'size_t' {aka 'unsigned int'} from 'ssize_t' {aka 'int'} may change the sign of the result [-Wsign-conversion] - 60 | howmany = H5Fget_obj_ids(fid, H5F_OBJ_ALL, cnt, objs); - | ^~~ -/build/libminc-2.4.03/testdir/minc2-leak-test.c: In function 'leak_loop': -/build/libminc-2.4.03/testdir/minc2-leak-test.c:113:40: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - 113 | buffer = (double *) malloc( n_voxels * sizeof(double)); - | ^ -/build/libminc-2.4.03/testdir/minc2-leak-test.c: In function 'create_test_image': -/build/libminc-2.4.03/testdir/minc2-leak-test.c:235:41: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - 235 | buf = ( uint16_t * ) malloc ( nvoxels * sizeof ( uint16_t ) ); - | ^ -/build/libminc-2.4.03/testdir/minc2-leak-test.c:253:16: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 253 | start[0] = i; - | ^ -/build/libminc-2.4.03/testdir/minc2-leak-test.c: In function 'main': -/build/libminc-2.4.03/testdir/minc2-leak-test.c:306:46: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 306 | result = miget_dimension_sizes(dimensions, ndims, sizes); - | ^~~~~ -[ 67%] Linking C executable minc2-multires-test -cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-multires-test.dir/link.txt --verbose=1 -/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-multires-test.dir/minc2-multires-test.c.o -o minc2-multires-test -Wl,-rpath,/build/libminc-2.4.03/obj-arm-linux-gnueabihf:/usr/lib/arm-linux-gnueabihf/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf make[3]: Leaving directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' [ 67%] Built target minc2-record-test make -f testdir/CMakeFiles/minc2-create-test-images.dir/build.make testdir/CMakeFiles/minc2-create-test-images.dir/depend make[3]: Entering directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-arm-linux-gnueabihf /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc2-create-test-images.dir/DependInfo.cmake --color= +[ 68%] Linking C executable minc2-multires-test +cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-multires-test.dir/link.txt --verbose=1 Dependee "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc2-create-test-images.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc2-create-test-images.dir/depend.internal". +/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-multires-test.dir/minc2-multires-test.c.o -o minc2-multires-test -Wl,-rpath,/build/libminc-2.4.03/obj-arm-linux-gnueabihf:/usr/lib/arm-linux-gnueabihf/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf Dependee "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc2-create-test-images.dir/depend.internal". Scanning dependencies of target minc2-create-test-images make[3]: Leaving directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' make -f testdir/CMakeFiles/minc2-create-test-images.dir/build.make testdir/CMakeFiles/minc2-create-test-images.dir/build make[3]: Entering directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' -[ 68%] Linking C executable minc2-leak-test -cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-leak-test.dir/link.txt --verbose=1 [ 68%] Building C object testdir/CMakeFiles/minc2-create-test-images.dir/minc2-create-test-images.c.o cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-create-test-images.dir/minc2-create-test-images.c.o -c /build/libminc-2.4.03/testdir/minc2-create-test-images.c -/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-leak-test.dir/minc2-leak-test.c.o -o minc2-leak-test -Wl,-rpath,/build/libminc-2.4.03/obj-arm-linux-gnueabihf:/usr/lib/arm-linux-gnueabihf/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf -make[3]: Leaving directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' -[ 68%] Built target minc2-multires-test -make -f testdir/CMakeFiles/mincapi.dir/build.make testdir/CMakeFiles/mincapi.dir/depend -make[3]: Entering directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' -cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-arm-linux-gnueabihf /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/mincapi.dir/DependInfo.cmake --color= -Dependee "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/mincapi.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/mincapi.dir/depend.internal". -Dependee "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/mincapi.dir/depend.internal". /build/libminc-2.4.03/testdir/minc2-create-test-images.c: In function 'create_3D_image': /build/libminc-2.4.03/testdir/minc2-create-test-images.c:137:16: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 137 | start[0] = i; @@ -4245,14 +4329,27 @@ /build/libminc-2.4.03/testdir/minc2-create-test-images.c:212:18: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 212 | start[1] = j; | ^ +make[3]: Leaving directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' +[ 68%] Built target minc2-leak-test +make -f testdir/CMakeFiles/mincapi.dir/build.make testdir/CMakeFiles/mincapi.dir/depend +make[3]: Entering directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' +cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-arm-linux-gnueabihf /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/mincapi.dir/DependInfo.cmake --color= +Dependee "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/mincapi.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/mincapi.dir/depend.internal". +Dependee "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/mincapi.dir/depend.internal". Scanning dependencies of target mincapi make[3]: Leaving directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' make -f testdir/CMakeFiles/mincapi.dir/build.make testdir/CMakeFiles/mincapi.dir/build make[3]: Entering directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' [ 68%] Building C object testdir/CMakeFiles/mincapi.dir/mincapi.c.o cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/mincapi.dir/mincapi.c.o -c /build/libminc-2.4.03/testdir/mincapi.c -[ 69%] Linking C executable volume_test -cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/volume_test.dir/link.txt --verbose=1 +make[3]: Leaving directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' +[ 69%] Linking C executable minc2-create-test-images +cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-create-test-images.dir/link.txt --verbose=1 +[ 69%] Built target minc2-multires-test +make -f testdir/CMakeFiles/minc2-hyper-test-2.dir/build.make testdir/CMakeFiles/minc2-hyper-test-2.dir/depend +make[3]: Entering directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' +cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-arm-linux-gnueabihf /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc2-hyper-test-2.dir/DependInfo.cmake --color= +/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-create-test-images.dir/minc2-create-test-images.c.o -o minc2-create-test-images -Wl,-rpath,/build/libminc-2.4.03/obj-arm-linux-gnueabihf:/usr/lib/arm-linux-gnueabihf/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf /build/libminc-2.4.03/testdir/mincapi.c: In function 'test3': /build/libminc-2.4.03/testdir/mincapi.c:209:11: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 209 | total *= dims[i].length; @@ -4278,23 +4375,14 @@ /build/libminc-2.4.03/testdir/mincapi.c:644:11: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 644 | total *= dims[i].length; | ^~ -/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/volume_test.dir/volume_test.c.o -o volume_test -Wl,-rpath,/build/libminc-2.4.03/obj-arm-linux-gnueabihf:/usr/lib/arm-linux-gnueabihf/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf -make[3]: Leaving directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' -[ 69%] Built target minc2-leak-test -make -f testdir/CMakeFiles/minc2-hyper-test-2.dir/build.make testdir/CMakeFiles/minc2-hyper-test-2.dir/depend -make[3]: Entering directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' -cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-arm-linux-gnueabihf /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc2-hyper-test-2.dir/DependInfo.cmake --color= Dependee "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc2-hyper-test-2.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc2-hyper-test-2.dir/depend.internal". Dependee "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc2-hyper-test-2.dir/depend.internal". Scanning dependencies of target minc2-hyper-test-2 make[3]: Leaving directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' make -f testdir/CMakeFiles/minc2-hyper-test-2.dir/build.make testdir/CMakeFiles/minc2-hyper-test-2.dir/build make[3]: Entering directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' -[ 70%] Linking C executable minc2-create-test-images -cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-create-test-images.dir/link.txt --verbose=1 -[ 71%] Building C object testdir/CMakeFiles/minc2-hyper-test-2.dir/minc2-hyper-test-2.c.o +[ 70%] Building C object testdir/CMakeFiles/minc2-hyper-test-2.dir/minc2-hyper-test-2.c.o cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-hyper-test-2.dir/minc2-hyper-test-2.c.o -c /build/libminc-2.4.03/testdir/minc2-hyper-test-2.c -/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-create-test-images.dir/minc2-create-test-images.c.o -o minc2-create-test-images -Wl,-rpath,/build/libminc-2.4.03/obj-arm-linux-gnueabihf:/usr/lib/arm-linux-gnueabihf/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf /build/libminc-2.4.03/testdir/minc2-hyper-test-2.c: In function 'create_test_file': /build/libminc-2.4.03/testdir/minc2-hyper-test-2.c:72:16: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 72 | start[0] = i; @@ -4304,7 +4392,7 @@ 145 | buffer = ( double * ) malloc ( count[0] * count[1] * count[2] * sizeof ( double ) ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ make[3]: Leaving directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' -[ 71%] Built target volume_test +[ 70%] Built target minc2-create-test-images make -f testdir/CMakeFiles/minc2-valid-test.dir/build.make testdir/CMakeFiles/minc2-valid-test.dir/depend make[3]: Entering directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-arm-linux-gnueabihf /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc2-valid-test.dir/DependInfo.cmake --color= @@ -4314,27 +4402,51 @@ make[3]: Leaving directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' make -f testdir/CMakeFiles/minc2-valid-test.dir/build.make testdir/CMakeFiles/minc2-valid-test.dir/build make[3]: Entering directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' +[ 71%] Linking C executable volume_test +cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/volume_test.dir/link.txt --verbose=1 [ 72%] Building C object testdir/CMakeFiles/minc2-valid-test.dir/minc2-valid-test.c.o +[ 72%] Linking C executable minc2-hyper-test-2 cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-valid-test.dir/minc2-valid-test.c.o -c /build/libminc-2.4.03/testdir/minc2-valid-test.c +cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-hyper-test-2.dir/link.txt --verbose=1 +/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/volume_test.dir/volume_test.c.o -o volume_test -Wl,-rpath,/build/libminc-2.4.03/obj-arm-linux-gnueabihf:/usr/lib/arm-linux-gnueabihf/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf +/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-hyper-test-2.dir/minc2-hyper-test-2.c.o -o minc2-hyper-test-2 -Wl,-rpath,/build/libminc-2.4.03/obj-arm-linux-gnueabihf:/usr/lib/arm-linux-gnueabihf/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf +[ 72%] Linking C executable minc2-valid-test +cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-valid-test.dir/link.txt --verbose=1 +/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-valid-test.dir/minc2-valid-test.c.o -o minc2-valid-test -Wl,-rpath,/build/libminc-2.4.03/obj-arm-linux-gnueabihf:/usr/lib/arm-linux-gnueabihf/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf +make[3]: Leaving directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' make[3]: Leaving directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' -[ 72%] Built target minc2-create-test-images +[ 72%] Built target volume_test make -f testdir/CMakeFiles/minc_long_attr.dir/build.make testdir/CMakeFiles/minc_long_attr.dir/depend make[3]: Entering directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-arm-linux-gnueabihf /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc_long_attr.dir/DependInfo.cmake --color= -[ 72%] Linking C executable minc2-hyper-test-2 -cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-hyper-test-2.dir/link.txt --verbose=1 +[ 72%] Built target minc2-hyper-test-2 +make -f testdir/CMakeFiles/create_grid_xfm.dir/build.make testdir/CMakeFiles/create_grid_xfm.dir/depend +make[3]: Entering directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' Dependee "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc_long_attr.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc_long_attr.dir/depend.internal". Dependee "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc_long_attr.dir/depend.internal". +cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-arm-linux-gnueabihf /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/create_grid_xfm.dir/DependInfo.cmake --color= Scanning dependencies of target minc_long_attr make[3]: Leaving directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' -/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-hyper-test-2.dir/minc2-hyper-test-2.c.o -o minc2-hyper-test-2 -Wl,-rpath,/build/libminc-2.4.03/obj-arm-linux-gnueabihf:/usr/lib/arm-linux-gnueabihf/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf make -f testdir/CMakeFiles/minc_long_attr.dir/build.make testdir/CMakeFiles/minc_long_attr.dir/build make[3]: Entering directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' +Dependee "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/create_grid_xfm.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/create_grid_xfm.dir/depend.internal". +Dependee "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/create_grid_xfm.dir/depend.internal". [ 72%] Building C object testdir/CMakeFiles/minc_long_attr.dir/minc_long_attr.c.o cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc_long_attr.dir/minc_long_attr.c.o -c /build/libminc-2.4.03/testdir/minc_long_attr.c -[ 72%] Linking C executable minc2-valid-test -cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-valid-test.dir/link.txt --verbose=1 -/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-valid-test.dir/minc2-valid-test.c.o -o minc2-valid-test -Wl,-rpath,/build/libminc-2.4.03/obj-arm-linux-gnueabihf:/usr/lib/arm-linux-gnueabihf/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf +Scanning dependencies of target create_grid_xfm +make[3]: Leaving directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' +make -f testdir/CMakeFiles/create_grid_xfm.dir/build.make testdir/CMakeFiles/create_grid_xfm.dir/build +make[3]: Entering directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' +[ 73%] Building C object testdir/CMakeFiles/create_grid_xfm.dir/create_grid_xfm.c.o +cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/create_grid_xfm.dir/create_grid_xfm.c.o -c /build/libminc-2.4.03/testdir/create_grid_xfm.c +make[3]: Leaving directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' +[ 74%] Linking C executable mincapi +cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/mincapi.dir/link.txt --verbose=1 +[ 74%] Built target minc2-valid-test +make -f testdir/CMakeFiles/icv.dir/build.make testdir/CMakeFiles/icv.dir/depend +make[3]: Entering directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' +cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-arm-linux-gnueabihf /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/icv.dir/DependInfo.cmake --color= +/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/mincapi.dir/mincapi.c.o -o mincapi -Wl,-rpath,/build/libminc-2.4.03/obj-arm-linux-gnueabihf:/usr/lib/arm-linux-gnueabihf/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf /build/libminc-2.4.03/testdir/minc_long_attr.c: In function 'test1': /build/libminc-2.4.03/testdir/minc_long_attr.c:125:32: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 125 | ip->large_attribute=calloc(ip->attribute_size,sizeof(char)); @@ -4352,87 +4464,77 @@ /build/libminc-2.4.03/testdir/minc_long_attr.c:262:37: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 262 | if(memcmp(att,ip->large_attribute,att_length)!=0) | ^~~~~~~~~~ -[ 73%] Linking C executable mincapi -cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/mincapi.dir/link.txt --verbose=1 -/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/mincapi.dir/mincapi.c.o -o mincapi -Wl,-rpath,/build/libminc-2.4.03/obj-arm-linux-gnueabihf:/usr/lib/arm-linux-gnueabihf/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf -make[3]: Leaving directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' -[ 73%] Built target minc2-hyper-test-2 -make -f testdir/CMakeFiles/create_grid_xfm.dir/build.make testdir/CMakeFiles/create_grid_xfm.dir/depend -make[3]: Entering directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' -cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-arm-linux-gnueabihf /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/create_grid_xfm.dir/DependInfo.cmake --color= -Dependee "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/create_grid_xfm.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/create_grid_xfm.dir/depend.internal". -Dependee "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/create_grid_xfm.dir/depend.internal". -Scanning dependencies of target create_grid_xfm -make[3]: Leaving directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' -make -f testdir/CMakeFiles/create_grid_xfm.dir/build.make testdir/CMakeFiles/create_grid_xfm.dir/build -make[3]: Entering directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' -[ 74%] Building C object testdir/CMakeFiles/create_grid_xfm.dir/create_grid_xfm.c.o -cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/create_grid_xfm.dir/create_grid_xfm.c.o -c /build/libminc-2.4.03/testdir/create_grid_xfm.c -[ 75%] Linking C executable minc_long_attr -cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc_long_attr.dir/link.txt --verbose=1 -make[3]: Leaving directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' -/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc_long_attr.dir/minc_long_attr.c.o -o minc_long_attr -Wl,-rpath,/build/libminc-2.4.03/obj-arm-linux-gnueabihf:/usr/lib/arm-linux-gnueabihf/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf -[ 75%] Built target minc2-valid-test -make -f testdir/CMakeFiles/icv.dir/build.make testdir/CMakeFiles/icv.dir/depend -make[3]: Leaving directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' -make[3]: Entering directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' -cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-arm-linux-gnueabihf /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/icv.dir/DependInfo.cmake --color= -In file included from /usr/include/c++/10/vector:72, - from /build/libminc-2.4.03/ezminc/minc_1_rw.h:18, - from /build/libminc-2.4.03/ezminc/minc_1_rw.cpp:23: -/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = double; _Alloc = std::allocator]': -/usr/include/c++/10/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector::iterator' changed in GCC 7.1 - 509 | vector<_Tp, _Alloc>:: - | ^~~~~~~~~~~~~~~~~~~ -[ 75%] Built target mincapi Dependee "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/icv.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/icv.dir/depend.internal". Dependee "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/icv.dir/depend.internal". -make -f testdir/CMakeFiles/minc2-grpattr-test.dir/build.make testdir/CMakeFiles/minc2-grpattr-test.dir/depend -make[3]: Entering directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' -cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-arm-linux-gnueabihf /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc2-grpattr-test.dir/DependInfo.cmake --color= Scanning dependencies of target icv make[3]: Leaving directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' make -f testdir/CMakeFiles/icv.dir/build.make testdir/CMakeFiles/icv.dir/build make[3]: Entering directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' +[ 74%] Building C object testdir/CMakeFiles/icv.dir/icv.c.o +cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/icv.dir/icv.c.o -c /build/libminc-2.4.03/testdir/icv.c +[ 74%] Linking C executable create_grid_xfm +cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/create_grid_xfm.dir/link.txt --verbose=1 +/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/create_grid_xfm.dir/create_grid_xfm.c.o -o create_grid_xfm -Wl,-rpath,/usr/lib/arm-linux-gnueabihf/hdf5/serial:/build/libminc-2.4.03/obj-arm-linux-gnueabihf /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf ../libminc2.so.5.2.0 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lrt -lm -ldl -lnetcdf -lm -ldl -lnetcdf +make[3]: Leaving directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' +[ 74%] Built target mincapi +make -f testdir/CMakeFiles/minc2-grpattr-test.dir/build.make testdir/CMakeFiles/minc2-grpattr-test.dir/depend +make[3]: Entering directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' +cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-arm-linux-gnueabihf /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc2-grpattr-test.dir/DependInfo.cmake --color= +[ 75%] Linking C executable icv +cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/icv.dir/link.txt --verbose=1 Dependee "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc2-grpattr-test.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc2-grpattr-test.dir/depend.internal". Dependee "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc2-grpattr-test.dir/depend.internal". Scanning dependencies of target minc2-grpattr-test -[ 75%] Building C object testdir/CMakeFiles/icv.dir/icv.c.o make[3]: Leaving directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' make -f testdir/CMakeFiles/minc2-grpattr-test.dir/build.make testdir/CMakeFiles/minc2-grpattr-test.dir/build -cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/icv.dir/icv.c.o -c /build/libminc-2.4.03/testdir/icv.c make[3]: Entering directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' -[ 75%] Building C object testdir/CMakeFiles/minc2-grpattr-test.dir/minc2-grpattr-test.c.o +/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/icv.dir/icv.c.o -o icv -Wl,-rpath,/build/libminc-2.4.03/obj-arm-linux-gnueabihf:/usr/lib/arm-linux-gnueabihf/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf +[ 76%] Linking C executable minc_long_attr +cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc_long_attr.dir/link.txt --verbose=1 +[ 76%] Building C object testdir/CMakeFiles/minc2-grpattr-test.dir/minc2-grpattr-test.c.o cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-grpattr-test.dir/minc2-grpattr-test.c.o -c /build/libminc-2.4.03/testdir/minc2-grpattr-test.c +/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc_long_attr.dir/minc_long_attr.c.o -o minc_long_attr -Wl,-rpath,/build/libminc-2.4.03/obj-arm-linux-gnueabihf:/usr/lib/arm-linux-gnueabihf/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf make[3]: Leaving directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' -[ 75%] Built target minc_long_attr +[ 76%] Built target create_grid_xfm make -f testdir/CMakeFiles/minc2-hyper-test.dir/build.make testdir/CMakeFiles/minc2-hyper-test.dir/depend make[3]: Entering directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-arm-linux-gnueabihf /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc2-hyper-test.dir/DependInfo.cmake --color= -In file included from /usr/include/c++/10/vector:67, - from /build/libminc-2.4.03/ezminc/minc_1_rw.h:18, - from /build/libminc-2.4.03/ezminc/minc_1_rw.cpp:23: -/usr/include/c++/10/bits/stl_vector.h: In member function 'void minc::minc_1_reader::open(const char*, bool, bool, bool)': -/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 - 960 | _M_fill_insert(end(), __new_size - size(), __x); - | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Dependee "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc2-hyper-test.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc2-hyper-test.dir/depend.internal". Dependee "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc2-hyper-test.dir/depend.internal". -[ 75%] Linking C executable create_grid_xfm -cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/create_grid_xfm.dir/link.txt --verbose=1 Scanning dependencies of target minc2-hyper-test make[3]: Leaving directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' make -f testdir/CMakeFiles/minc2-hyper-test.dir/build.make testdir/CMakeFiles/minc2-hyper-test.dir/build make[3]: Entering directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' -/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/create_grid_xfm.dir/create_grid_xfm.c.o -o create_grid_xfm -Wl,-rpath,/usr/lib/arm-linux-gnueabihf/hdf5/serial:/build/libminc-2.4.03/obj-arm-linux-gnueabihf /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf ../libminc2.so.5.2.0 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lrt -lm -ldl -lnetcdf -lm -ldl -lnetcdf -[ 76%] Building C object testdir/CMakeFiles/minc2-hyper-test.dir/minc2-hyper-test.c.o +[ 77%] Building C object testdir/CMakeFiles/minc2-hyper-test.dir/minc2-hyper-test.c.o cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-hyper-test.dir/minc2-hyper-test.c.o -c /build/libminc-2.4.03/testdir/minc2-hyper-test.c -[ 77%] Linking C executable icv -cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/icv.dir/link.txt --verbose=1 +make[3]: Leaving directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' +[ 77%] Built target icv +make -f testdir/CMakeFiles/test_mconv.dir/build.make testdir/CMakeFiles/test_mconv.dir/depend +make[3]: Entering directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' +cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-arm-linux-gnueabihf /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/test_mconv.dir/DependInfo.cmake --color= +make[3]: Leaving directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' +Dependee "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/test_mconv.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/test_mconv.dir/depend.internal". +Dependee "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/test_mconv.dir/depend.internal". +[ 77%] Built target minc_long_attr +make -f testdir/CMakeFiles/icv_range.dir/build.make testdir/CMakeFiles/icv_range.dir/depend +Scanning dependencies of target test_mconv +make[3]: Entering directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' +cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-arm-linux-gnueabihf /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/icv_range.dir/DependInfo.cmake --color= +make[3]: Leaving directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' +make -f testdir/CMakeFiles/test_mconv.dir/build.make testdir/CMakeFiles/test_mconv.dir/build +make[3]: Entering directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' +Dependee "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/icv_range.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/icv_range.dir/depend.internal". +Dependee "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/icv_range.dir/depend.internal". +[ 78%] Building C object testdir/CMakeFiles/test_mconv.dir/test_mconv.c.o +cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/test_mconv.dir/test_mconv.c.o -c /build/libminc-2.4.03/testdir/test_mconv.c +Scanning dependencies of target icv_range +make[3]: Leaving directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' +make -f testdir/CMakeFiles/icv_range.dir/build.make testdir/CMakeFiles/icv_range.dir/build /build/libminc-2.4.03/testdir/minc2-hyper-test.c: In function 'create_and_test_image': /build/libminc-2.4.03/testdir/minc2-hyper-test.c:89:26: warning: conversion to 'short unsigned int' from 'short int' may change the sign of the result [-Wsign-conversion] 89 | stmp2[i][j][k] = (short)((i*XP)+(j*YP)+(k*ZP)); | ^ +make[3]: Entering directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' /build/libminc-2.4.03/testdir/minc2-hyper-test.c:261:20: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 261 | start[0] = i; | ^ @@ -4465,64 +4567,35 @@ /build/libminc-2.4.03/testdir/minc2-hyper-test.c:816:28: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 816 | start[2] = k; | ^ -/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/icv.dir/icv.c.o -o icv -Wl,-rpath,/build/libminc-2.4.03/obj-arm-linux-gnueabihf:/usr/lib/arm-linux-gnueabihf/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf -make[3]: Leaving directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' -[ 77%] Built target create_grid_xfm -make -f testdir/CMakeFiles/test_mconv.dir/build.make testdir/CMakeFiles/test_mconv.dir/depend -make[3]: Entering directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' -cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-arm-linux-gnueabihf /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/test_mconv.dir/DependInfo.cmake --color= -Dependee "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/test_mconv.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/test_mconv.dir/depend.internal". -Dependee "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/test_mconv.dir/depend.internal". -Scanning dependencies of target test_mconv -make[3]: Leaving directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' -make -f testdir/CMakeFiles/test_mconv.dir/build.make testdir/CMakeFiles/test_mconv.dir/build -make[3]: Entering directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' -make[3]: Leaving directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' -[ 78%] Building C object testdir/CMakeFiles/test_mconv.dir/test_mconv.c.o -cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/test_mconv.dir/test_mconv.c.o -c /build/libminc-2.4.03/testdir/test_mconv.c -[ 78%] Built target icv -make -f testdir/CMakeFiles/icv_range.dir/build.make testdir/CMakeFiles/icv_range.dir/depend -make[3]: Entering directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' -cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-arm-linux-gnueabihf /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/icv_range.dir/DependInfo.cmake --color= -Dependee "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/icv_range.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/icv_range.dir/depend.internal". -Dependee "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/icv_range.dir/depend.internal". -Scanning dependencies of target icv_range -[ 78%] Linking C executable minc2-grpattr-test -make[3]: Leaving directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' -cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-grpattr-test.dir/link.txt --verbose=1 -make -f testdir/CMakeFiles/icv_range.dir/build.make testdir/CMakeFiles/icv_range.dir/build -make[3]: Entering directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' [ 79%] Building C object testdir/CMakeFiles/icv_range.dir/icv_range.c.o cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/icv_range.dir/icv_range.c.o -c /build/libminc-2.4.03/testdir/icv_range.c -/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-grpattr-test.dir/minc2-grpattr-test.c.o -o minc2-grpattr-test -Wl,-rpath,/build/libminc-2.4.03/obj-arm-linux-gnueabihf:/usr/lib/arm-linux-gnueabihf/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf [ 79%] Linking C executable test_mconv cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_mconv.dir/link.txt --verbose=1 -[ 79%] Linking CXX shared library libminc_io.so -cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/ezminc && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc_io.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libminc_io.so.5.2.0 -o libminc_io.so.5.2.0 CMakeFiles/minc_io.dir/minc_1_rw.cpp.o CMakeFiles/minc_io.dir/minc_1_simple_rw.cpp.o -Wl,-rpath,/build/libminc-2.4.03/obj-arm-linux-gnueabihf:/usr/lib/arm-linux-gnueabihf/hdf5/serial: ../libminc2.so.5.2.0 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf +[ 79%] Linking C executable minc2-grpattr-test +cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-grpattr-test.dir/link.txt --verbose=1 /usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/test_mconv.dir/test_mconv.c.o -o test_mconv -Wl,-rpath,/build/libminc-2.4.03/obj-arm-linux-gnueabihf:/usr/lib/arm-linux-gnueabihf/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf +/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-grpattr-test.dir/minc2-grpattr-test.c.o -o minc2-grpattr-test -Wl,-rpath,/build/libminc-2.4.03/obj-arm-linux-gnueabihf:/usr/lib/arm-linux-gnueabihf/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf +[ 79%] Linking C executable icv_range +cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/icv_range.dir/link.txt --verbose=1 +/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/icv_range.dir/icv_range.c.o -o icv_range -Wl,-rpath,/build/libminc-2.4.03/obj-arm-linux-gnueabihf:/usr/lib/arm-linux-gnueabihf/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf make[3]: Leaving directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' [ 79%] Built target minc2-grpattr-test make -f testdir/CMakeFiles/icv_dim.dir/build.make testdir/CMakeFiles/icv_dim.dir/depend make[3]: Entering directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-arm-linux-gnueabihf /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/icv_dim.dir/DependInfo.cmake --color= +make[3]: Leaving directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' Dependee "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/icv_dim.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/icv_dim.dir/depend.internal". Dependee "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/icv_dim.dir/depend.internal". +[ 79%] Built target test_mconv +make -f testdir/CMakeFiles/icv_fillvalue.dir/build.make testdir/CMakeFiles/icv_fillvalue.dir/depend Scanning dependencies of target icv_dim make[3]: Leaving directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' make -f testdir/CMakeFiles/icv_dim.dir/build.make testdir/CMakeFiles/icv_dim.dir/build make[3]: Entering directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' -[ 79%] Building C object testdir/CMakeFiles/icv_dim.dir/icv_dim.c.o -cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/icv_dim.dir/icv_dim.c.o -c /build/libminc-2.4.03/testdir/icv_dim.c -[ 79%] Linking C executable icv_range -cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/icv_range.dir/link.txt --verbose=1 -/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/icv_range.dir/icv_range.c.o -o icv_range -Wl,-rpath,/build/libminc-2.4.03/obj-arm-linux-gnueabihf:/usr/lib/arm-linux-gnueabihf/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf -make[3]: Leaving directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' -cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/ezminc && /usr/bin/cmake -E cmake_symlink_library libminc_io.so.5.2.0 libminc_io.so.5.2.0 libminc_io.so -[ 79%] Built target test_mconv -make -f testdir/CMakeFiles/icv_fillvalue.dir/build.make testdir/CMakeFiles/icv_fillvalue.dir/depend make[3]: Entering directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-arm-linux-gnueabihf /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/icv_fillvalue.dir/DependInfo.cmake --color= +[ 79%] Building C object testdir/CMakeFiles/icv_dim.dir/icv_dim.c.o +cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/icv_dim.dir/icv_dim.c.o -c /build/libminc-2.4.03/testdir/icv_dim.c Dependee "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/icv_fillvalue.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/icv_fillvalue.dir/depend.internal". Dependee "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/icv_fillvalue.dir/depend.internal". Scanning dependencies of target icv_fillvalue @@ -4530,9 +4603,9 @@ make -f testdir/CMakeFiles/icv_fillvalue.dir/build.make testdir/CMakeFiles/icv_fillvalue.dir/build make[3]: Entering directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' [ 79%] Building C object testdir/CMakeFiles/icv_fillvalue.dir/icv_fillvalue.c.o -make[3]: Leaving directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/icv_fillvalue.dir/icv_fillvalue.c.o -c /build/libminc-2.4.03/testdir/icv_fillvalue.c -[ 79%] Built target minc_io +make[3]: Leaving directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' +[ 79%] Built target icv_range make -f testdir/CMakeFiles/icv_dim1.dir/build.make testdir/CMakeFiles/icv_dim1.dir/depend make[3]: Entering directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-arm-linux-gnueabihf /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/icv_dim1.dir/DependInfo.cmake --color= @@ -4542,38 +4615,36 @@ make[3]: Leaving directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' make -f testdir/CMakeFiles/icv_dim1.dir/build.make testdir/CMakeFiles/icv_dim1.dir/build make[3]: Entering directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' -[ 79%] Building C object testdir/CMakeFiles/icv_dim1.dir/icv_dim1.c.o -cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/icv_dim1.dir/icv_dim1.c.o -c /build/libminc-2.4.03/testdir/icv_dim1.c -make[3]: Leaving directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' [ 80%] Linking C executable icv_dim -[ 80%] Built target icv_range +[ 80%] Building C object testdir/CMakeFiles/icv_dim1.dir/icv_dim1.c.o cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/icv_dim.dir/link.txt --verbose=1 -make -f testdir/CMakeFiles/minc_tst.dir/build.make testdir/CMakeFiles/minc_tst.dir/depend -make[3]: Entering directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' -cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-arm-linux-gnueabihf /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc_tst.dir/DependInfo.cmake --color= +cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/icv_dim1.dir/icv_dim1.c.o -c /build/libminc-2.4.03/testdir/icv_dim1.c /usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/icv_dim.dir/icv_dim.c.o -o icv_dim -Wl,-rpath,/build/libminc-2.4.03/obj-arm-linux-gnueabihf:/usr/lib/arm-linux-gnueabihf/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf -Dependee "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc_tst.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc_tst.dir/depend.internal". -Dependee "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc_tst.dir/depend.internal". [ 80%] Linking C executable icv_fillvalue cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/icv_fillvalue.dir/link.txt --verbose=1 -Scanning dependencies of target minc_tst -make[3]: Leaving directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' -make -f testdir/CMakeFiles/minc_tst.dir/build.make testdir/CMakeFiles/minc_tst.dir/build -make[3]: Entering directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' /usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/icv_fillvalue.dir/icv_fillvalue.c.o -o icv_fillvalue -Wl,-rpath,/build/libminc-2.4.03/obj-arm-linux-gnueabihf:/usr/lib/arm-linux-gnueabihf/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf -[ 80%] Building C object testdir/CMakeFiles/minc_tst.dir/minc.c.o -cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc_tst.dir/minc.c.o -c /build/libminc-2.4.03/testdir/minc.c -[ 80%] Linking C executable minc2-hyper-test -cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-hyper-test.dir/link.txt --verbose=1 [ 81%] Linking C executable icv_dim1 cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/icv_dim1.dir/link.txt --verbose=1 +/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/icv_dim1.dir/icv_dim1.c.o -o icv_dim1 -Wl,-rpath,/build/libminc-2.4.03/obj-arm-linux-gnueabihf:/usr/lib/arm-linux-gnueabihf/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf +[ 81%] Linking C executable minc2-hyper-test +cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-hyper-test.dir/link.txt --verbose=1 /usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-hyper-test.dir/minc2-hyper-test.c.o -o minc2-hyper-test -Wl,-rpath,/build/libminc-2.4.03/obj-arm-linux-gnueabihf:/usr/lib/arm-linux-gnueabihf/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf make[3]: Leaving directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' -/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/icv_dim1.dir/icv_dim1.c.o -o icv_dim1 -Wl,-rpath,/build/libminc-2.4.03/obj-arm-linux-gnueabihf:/usr/lib/arm-linux-gnueabihf/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf +make[3]: Leaving directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' +[ 81%] Built target icv_fillvalue +make -f testdir/CMakeFiles/minc_tst.dir/build.make testdir/CMakeFiles/minc_tst.dir/depend [ 81%] Built target icv_dim make -f testdir/CMakeFiles/multidim_test.dir/build.make testdir/CMakeFiles/multidim_test.dir/depend make[3]: Entering directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' +cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-arm-linux-gnueabihf /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc_tst.dir/DependInfo.cmake --color= +make[3]: Entering directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-arm-linux-gnueabihf /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/multidim_test.dir/DependInfo.cmake --color= +Dependee "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc_tst.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc_tst.dir/depend.internal". +Dependee "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc_tst.dir/depend.internal". +Scanning dependencies of target minc_tst +make[3]: Leaving directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' +make -f testdir/CMakeFiles/minc_tst.dir/build.make testdir/CMakeFiles/minc_tst.dir/build +make[3]: Entering directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' Dependee "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/multidim_test.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/multidim_test.dir/depend.internal". Dependee "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/multidim_test.dir/depend.internal". make[3]: Leaving directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' @@ -4581,35 +4652,23 @@ make[3]: Leaving directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' make -f testdir/CMakeFiles/multidim_test.dir/build.make testdir/CMakeFiles/multidim_test.dir/build make[3]: Entering directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' -[ 82%] Linking C executable minc_tst -cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc_tst.dir/link.txt --verbose=1 -[ 82%] Built target icv_fillvalue +[ 81%] Building C object testdir/CMakeFiles/minc_tst.dir/minc.c.o +cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc_tst.dir/minc.c.o -c /build/libminc-2.4.03/testdir/minc.c +[ 81%] Building C object testdir/CMakeFiles/multidim_test.dir/multidim_test.c.o +cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/multidim_test.dir/multidim_test.c.o -c /build/libminc-2.4.03/testdir/multidim_test.c +[ 81%] Built target icv_dim1 make -f testdir/CMakeFiles/minc_conversion.dir/build.make testdir/CMakeFiles/minc_conversion.dir/depend make[3]: Entering directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-arm-linux-gnueabihf /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc_conversion.dir/DependInfo.cmake --color= -/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc_tst.dir/minc.c.o -o minc_tst -Wl,-rpath,/build/libminc-2.4.03/obj-arm-linux-gnueabihf:/usr/lib/arm-linux-gnueabihf/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf -[ 82%] Building C object testdir/CMakeFiles/multidim_test.dir/multidim_test.c.o -cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/multidim_test.dir/multidim_test.c.o -c /build/libminc-2.4.03/testdir/multidim_test.c Dependee "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc_conversion.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc_conversion.dir/depend.internal". Dependee "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc_conversion.dir/depend.internal". Scanning dependencies of target minc_conversion make[3]: Leaving directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' make -f testdir/CMakeFiles/minc_conversion.dir/build.make testdir/CMakeFiles/minc_conversion.dir/build make[3]: Entering directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' -[ 82%] Building C object testdir/CMakeFiles/minc_conversion.dir/minc_conversion.c.o +[ 81%] Building C object testdir/CMakeFiles/minc_conversion.dir/minc_conversion.c.o cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc_conversion.dir/minc_conversion.c.o -c /build/libminc-2.4.03/testdir/minc_conversion.c make[3]: Leaving directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' -[ 82%] Built target minc2-hyper-test -make -f testdir/CMakeFiles/minc_types.dir/build.make testdir/CMakeFiles/minc_types.dir/depend -make[3]: Entering directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' -cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-arm-linux-gnueabihf /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc_types.dir/DependInfo.cmake --color= -Dependee "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc_types.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc_types.dir/depend.internal". -Dependee "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc_types.dir/depend.internal". -Scanning dependencies of target minc_types -make[3]: Leaving directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' -make -f testdir/CMakeFiles/minc_types.dir/build.make testdir/CMakeFiles/minc_types.dir/build -make[3]: Entering directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' -make[3]: Leaving directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' /build/libminc-2.4.03/testdir/minc_conversion.c: In function 'test2': /build/libminc-2.4.03/testdir/minc_conversion.c:156:24: warning: conversion from 'int' to 'float' may change value [-Wconversion] 156 | float tmp = (i * 10000.0f) + (j * 100.0f) + k; @@ -4640,33 +4699,40 @@ /build/libminc-2.4.03/testdir/minc_conversion.c:368:21: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'float' may change value [-Wconversion] 368 | float tmp = (i * 10000) + (j * 100) + k; | ^ -[ 82%] Building C object testdir/CMakeFiles/minc_types.dir/minc_types.c.o +[ 81%] Built target minc2-hyper-test +make -f testdir/CMakeFiles/minc_types.dir/build.make testdir/CMakeFiles/minc_types.dir/depend +make[3]: Entering directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' +cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-arm-linux-gnueabihf /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc_types.dir/DependInfo.cmake --color= +Dependee "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc_types.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc_types.dir/depend.internal". +Dependee "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc_types.dir/depend.internal". +Scanning dependencies of target minc_types +make[3]: Leaving directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' +make -f testdir/CMakeFiles/minc_types.dir/build.make testdir/CMakeFiles/minc_types.dir/build +make[3]: Entering directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' +[ 81%] Building C object testdir/CMakeFiles/minc_types.dir/minc_types.c.o cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc_types.dir/minc_types.c.o -c /build/libminc-2.4.03/testdir/minc_types.c -[ 82%] Built target icv_dim1 +[ 82%] Linking C executable minc_tst +cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc_tst.dir/link.txt --verbose=1 +/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc_tst.dir/minc.c.o -o minc_tst -Wl,-rpath,/build/libminc-2.4.03/obj-arm-linux-gnueabihf:/usr/lib/arm-linux-gnueabihf/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf +make[3]: Leaving directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' +[ 83%] Linking C executable minc_types +cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc_types.dir/link.txt --verbose=1 +[ 83%] Built target minc_tst make -f testdir/CMakeFiles/icv_vec.dir/build.make testdir/CMakeFiles/icv_vec.dir/depend make[3]: Entering directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-arm-linux-gnueabihf /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/icv_vec.dir/DependInfo.cmake --color= +/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc_types.dir/minc_types.c.o -o minc_types -Wl,-rpath,/build/libminc-2.4.03/obj-arm-linux-gnueabihf:/usr/lib/arm-linux-gnueabihf/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf Dependee "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/icv_vec.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/icv_vec.dir/depend.internal". Dependee "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/icv_vec.dir/depend.internal". Scanning dependencies of target icv_vec make[3]: Leaving directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' make -f testdir/CMakeFiles/icv_vec.dir/build.make testdir/CMakeFiles/icv_vec.dir/build make[3]: Entering directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' -[ 83%] Building C object testdir/CMakeFiles/icv_vec.dir/icv_vec.c.o +[ 84%] Building C object testdir/CMakeFiles/icv_vec.dir/icv_vec.c.o cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/icv_vec.dir/icv_vec.c.o -c /build/libminc-2.4.03/testdir/icv_vec.c -make[3]: Leaving directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' -[ 83%] Built target minc_tst -make -f testdir/CMakeFiles/test_xfm.dir/build.make testdir/CMakeFiles/test_xfm.dir/depend -make[3]: Entering directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' -cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-arm-linux-gnueabihf /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/test_xfm.dir/DependInfo.cmake --color= -Dependee "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/test_xfm.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/test_xfm.dir/depend.internal". -Dependee "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/test_xfm.dir/depend.internal". -Scanning dependencies of target test_xfm -make[3]: Leaving directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' -make -f testdir/CMakeFiles/test_xfm.dir/build.make testdir/CMakeFiles/test_xfm.dir/build -make[3]: Entering directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' -[ 84%] Building C object testdir/CMakeFiles/test_xfm.dir/vio_xfm_test/test-xfm.c.o -cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/test_xfm.dir/vio_xfm_test/test-xfm.c.o -c /build/libminc-2.4.03/testdir/vio_xfm_test/test-xfm.c +[ 85%] Linking C executable minc_conversion +cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc_conversion.dir/link.txt --verbose=1 +/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc_conversion.dir/minc_conversion.c.o -o minc_conversion -Wl,-rpath,/build/libminc-2.4.03/obj-arm-linux-gnueabihf:/usr/lib/arm-linux-gnueabihf/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf /build/libminc-2.4.03/testdir/icv_vec.c: In function 'test_icv_vector': /build/libminc-2.4.03/testdir/icv_vec.c:65:41: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 65 | short int *ivalue = malloc(N_ELEMENTS * sizeof(short int)); @@ -4680,89 +4746,112 @@ /build/libminc-2.4.03/testdir/icv_vec.c:126:23: note: in expansion of macro 'TVAL' 126 | ivalue[c] = TVAL(i, j, k, v); | ^~~~ -[ 85%] Linking C executable minc_types -cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc_types.dir/link.txt --verbose=1 -/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc_types.dir/minc_types.c.o -o minc_types -Wl,-rpath,/build/libminc-2.4.03/obj-arm-linux-gnueabihf:/usr/lib/arm-linux-gnueabihf/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf -[ 86%] Linking C executable minc_conversion -cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc_conversion.dir/link.txt --verbose=1 -/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc_conversion.dir/minc_conversion.c.o -o minc_conversion -Wl,-rpath,/build/libminc-2.4.03/obj-arm-linux-gnueabihf:/usr/lib/arm-linux-gnueabihf/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf -[ 86%] Linking C executable test_xfm -cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_xfm.dir/link.txt --verbose=1 -/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/test_xfm.dir/vio_xfm_test/test-xfm.c.o -o test_xfm -Wl,-rpath,/usr/lib/arm-linux-gnueabihf/hdf5/serial:/build/libminc-2.4.03/obj-arm-linux-gnueabihf /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf ../libminc2.so.5.2.0 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lrt -lm -ldl -lnetcdf -lm -ldl -lnetcdf make[3]: Leaving directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' -[ 86%] Built target minc_types +[ 85%] Built target minc_types +make -f testdir/CMakeFiles/test_xfm.dir/build.make testdir/CMakeFiles/test_xfm.dir/depend +make[3]: Entering directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' +cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-arm-linux-gnueabihf /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/test_xfm.dir/DependInfo.cmake --color= +Dependee "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/test_xfm.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/test_xfm.dir/depend.internal". +Dependee "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/test_xfm.dir/depend.internal". +Scanning dependencies of target test_xfm +make[3]: Leaving directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' +make -f testdir/CMakeFiles/test_xfm.dir/build.make testdir/CMakeFiles/test_xfm.dir/build +make[3]: Entering directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' +[ 86%] Building C object testdir/CMakeFiles/test_xfm.dir/vio_xfm_test/test-xfm.c.o +cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/test_xfm.dir/vio_xfm_test/test-xfm.c.o -c /build/libminc-2.4.03/testdir/vio_xfm_test/test-xfm.c +make[3]: Leaving directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' +[ 86%] Built target minc_conversion make -f testdir/CMakeFiles/copy_xfm.dir/build.make testdir/CMakeFiles/copy_xfm.dir/depend make[3]: Entering directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-arm-linux-gnueabihf /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/copy_xfm.dir/DependInfo.cmake --color= Dependee "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/copy_xfm.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/copy_xfm.dir/depend.internal". Dependee "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/copy_xfm.dir/depend.internal". -make[3]: Leaving directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' -make[3]: Leaving directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' Scanning dependencies of target copy_xfm -[ 86%] Built target test_xfm make[3]: Leaving directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' -make -f testdir/CMakeFiles/verify_xfm.dir/build.make testdir/CMakeFiles/verify_xfm.dir/depend make -f testdir/CMakeFiles/copy_xfm.dir/build.make testdir/CMakeFiles/copy_xfm.dir/build make[3]: Entering directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' -cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-arm-linux-gnueabihf /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/verify_xfm.dir/DependInfo.cmake --color= -make[3]: Entering directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' -[ 86%] Built target minc_conversion -make -f testdir/CMakeFiles/test_arg_parse.dir/build.make testdir/CMakeFiles/test_arg_parse.dir/depend +[ 86%] Building C object testdir/CMakeFiles/copy_xfm.dir/vio_xfm_test/copy-xfm.c.o +cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/copy_xfm.dir/vio_xfm_test/copy-xfm.c.o -c /build/libminc-2.4.03/testdir/vio_xfm_test/copy-xfm.c +[ 86%] Linking C executable icv_vec +cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/icv_vec.dir/link.txt --verbose=1 +/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/icv_vec.dir/icv_vec.c.o -o icv_vec -Wl,-rpath,/build/libminc-2.4.03/obj-arm-linux-gnueabihf:/usr/lib/arm-linux-gnueabihf/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf +[ 86%] Linking C executable test_xfm +cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_xfm.dir/link.txt --verbose=1 +make[3]: Leaving directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' +/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/test_xfm.dir/vio_xfm_test/test-xfm.c.o -o test_xfm -Wl,-rpath,/usr/lib/arm-linux-gnueabihf/hdf5/serial:/build/libminc-2.4.03/obj-arm-linux-gnueabihf /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf ../libminc2.so.5.2.0 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lrt -lm -ldl -lnetcdf -lm -ldl -lnetcdf +[ 86%] Linking C executable copy_xfm +cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/copy_xfm.dir/link.txt --verbose=1 +[ 86%] Built target icv_vec +make -f testdir/CMakeFiles/verify_xfm.dir/build.make testdir/CMakeFiles/verify_xfm.dir/depend make[3]: Entering directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' -cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-arm-linux-gnueabihf /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/test_arg_parse.dir/DependInfo.cmake --color= +cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-arm-linux-gnueabihf /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/verify_xfm.dir/DependInfo.cmake --color= +/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/copy_xfm.dir/vio_xfm_test/copy-xfm.c.o -o copy_xfm -Wl,-rpath,/usr/lib/arm-linux-gnueabihf/hdf5/serial:/build/libminc-2.4.03/obj-arm-linux-gnueabihf /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf ../libminc2.so.5.2.0 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lrt -lm -ldl -lnetcdf -lm -ldl -lnetcdf Dependee "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/verify_xfm.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/verify_xfm.dir/depend.internal". Dependee "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/verify_xfm.dir/depend.internal". -[ 86%] Building C object testdir/CMakeFiles/copy_xfm.dir/vio_xfm_test/copy-xfm.c.o -cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/copy_xfm.dir/vio_xfm_test/copy-xfm.c.o -c /build/libminc-2.4.03/testdir/vio_xfm_test/copy-xfm.c -Dependee "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/test_arg_parse.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/test_arg_parse.dir/depend.internal". -Dependee "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/test_arg_parse.dir/depend.internal". Scanning dependencies of target verify_xfm make[3]: Leaving directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' make -f testdir/CMakeFiles/verify_xfm.dir/build.make testdir/CMakeFiles/verify_xfm.dir/build -Scanning dependencies of target test_arg_parse -make[3]: Entering directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' -make[3]: Leaving directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' -make -f testdir/CMakeFiles/test_arg_parse.dir/build.make testdir/CMakeFiles/test_arg_parse.dir/build make[3]: Entering directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' +[ 86%] Linking C executable multidim_test [ 86%] Building C object testdir/CMakeFiles/verify_xfm.dir/vio_xfm_test/verify_xfm.c.o -cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/verify_xfm.dir/vio_xfm_test/verify_xfm.c.o -c /build/libminc-2.4.03/testdir/vio_xfm_test/verify_xfm.c -[ 87%] Building C object testdir/CMakeFiles/test_arg_parse.dir/test_arg_parse.c.o -cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/test_arg_parse.dir/test_arg_parse.c.o -c /build/libminc-2.4.03/testdir/test_arg_parse.c -[ 87%] Linking C executable icv_vec -cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/icv_vec.dir/link.txt --verbose=1 -/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/icv_vec.dir/icv_vec.c.o -o icv_vec -Wl,-rpath,/build/libminc-2.4.03/obj-arm-linux-gnueabihf:/usr/lib/arm-linux-gnueabihf/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf -[ 87%] Linking C executable multidim_test cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/multidim_test.dir/link.txt --verbose=1 +cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/verify_xfm.dir/vio_xfm_test/verify_xfm.c.o -c /build/libminc-2.4.03/testdir/vio_xfm_test/verify_xfm.c /usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/multidim_test.dir/multidim_test.c.o -o multidim_test -Wl,-rpath,/build/libminc-2.4.03/obj-arm-linux-gnueabihf:/usr/lib/arm-linux-gnueabihf/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf -[ 87%] Linking C executable copy_xfm -[ 87%] Linking C executable test_arg_parse -cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/copy_xfm.dir/link.txt --verbose=1 -cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_arg_parse.dir/link.txt --verbose=1 -/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/copy_xfm.dir/vio_xfm_test/copy-xfm.c.o -o copy_xfm -Wl,-rpath,/usr/lib/arm-linux-gnueabihf/hdf5/serial:/build/libminc-2.4.03/obj-arm-linux-gnueabihf /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf ../libminc2.so.5.2.0 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lrt -lm -ldl -lnetcdf -lm -ldl -lnetcdf -/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/test_arg_parse.dir/test_arg_parse.c.o -o test_arg_parse -Wl,-rpath,/build/libminc-2.4.03/obj-arm-linux-gnueabihf:/usr/lib/arm-linux-gnueabihf/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf make[3]: Leaving directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' -[ 87%] Built target icv_vec +[ 86%] Built target test_xfm +make -f testdir/CMakeFiles/test_arg_parse.dir/build.make testdir/CMakeFiles/test_arg_parse.dir/depend +make[3]: Entering directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' +cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-arm-linux-gnueabihf /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/test_arg_parse.dir/DependInfo.cmake --color= +make[3]: Leaving directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' +Dependee "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/test_arg_parse.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/test_arg_parse.dir/depend.internal". +Dependee "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/test_arg_parse.dir/depend.internal". +Scanning dependencies of target test_arg_parse +make[3]: Leaving directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' +make -f testdir/CMakeFiles/test_arg_parse.dir/build.make testdir/CMakeFiles/test_arg_parse.dir/build +make[3]: Entering directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' +[ 86%] Built target copy_xfm make -f testdir/CMakeFiles/minc2-convert-test.dir/build.make testdir/CMakeFiles/minc2-convert-test.dir/depend make[3]: Entering directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-arm-linux-gnueabihf /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc2-convert-test.dir/DependInfo.cmake --color= +[ 87%] Building C object testdir/CMakeFiles/test_arg_parse.dir/test_arg_parse.c.o +cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/test_arg_parse.dir/test_arg_parse.c.o -c /build/libminc-2.4.03/testdir/test_arg_parse.c Dependee "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc2-convert-test.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc2-convert-test.dir/depend.internal". Dependee "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc2-convert-test.dir/depend.internal". +make[3]: Leaving directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' Scanning dependencies of target minc2-convert-test make[3]: Leaving directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' make -f testdir/CMakeFiles/minc2-convert-test.dir/build.make testdir/CMakeFiles/minc2-convert-test.dir/build -[ 88%] Linking C executable verify_xfm -cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/verify_xfm.dir/link.txt --verbose=1 make[3]: Entering directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' -[ 89%] Building C object testdir/CMakeFiles/minc2-convert-test.dir/minc2-convert-test.c.o -cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-convert-test.dir/minc2-convert-test.c.o -c /build/libminc-2.4.03/testdir/minc2-convert-test.c -/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/verify_xfm.dir/vio_xfm_test/verify_xfm.c.o -o verify_xfm -Wl,-rpath,/usr/lib/arm-linux-gnueabihf/hdf5/serial:/build/libminc-2.4.03/obj-arm-linux-gnueabihf /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf ../libminc2.so.5.2.0 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lrt -lm -ldl -lnetcdf -lm -ldl -lnetcdf -make[3]: Leaving directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' -[ 89%] Built target multidim_test +[ 87%] Built target multidim_test make -f testdir/CMakeFiles/minc2-label-test.dir/build.make testdir/CMakeFiles/minc2-label-test.dir/depend make[3]: Entering directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-arm-linux-gnueabihf /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc2-label-test.dir/DependInfo.cmake --color= +[ 88%] Building C object testdir/CMakeFiles/minc2-convert-test.dir/minc2-convert-test.c.o +cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-convert-test.dir/minc2-convert-test.c.o -c /build/libminc-2.4.03/testdir/minc2-convert-test.c +[ 89%] Linking C executable verify_xfm +cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/verify_xfm.dir/link.txt --verbose=1 Dependee "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc2-label-test.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc2-label-test.dir/depend.internal". Dependee "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc2-label-test.dir/depend.internal". +/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/verify_xfm.dir/vio_xfm_test/verify_xfm.c.o -o verify_xfm -Wl,-rpath,/usr/lib/arm-linux-gnueabihf/hdf5/serial:/build/libminc-2.4.03/obj-arm-linux-gnueabihf /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf ../libminc2.so.5.2.0 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lrt -lm -ldl -lnetcdf -lm -ldl -lnetcdf +Scanning dependencies of target minc2-label-test +make[3]: Leaving directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' +make -f testdir/CMakeFiles/minc2-label-test.dir/build.make testdir/CMakeFiles/minc2-label-test.dir/build +make[3]: Entering directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' +[ 90%] Building C object testdir/CMakeFiles/minc2-label-test.dir/minc2-label-test.c.o +cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-label-test.dir/minc2-label-test.c.o -c /build/libminc-2.4.03/testdir/minc2-label-test.c +/build/libminc-2.4.03/testdir/minc2-label-test.c: In function 'create_label_image': +/build/libminc-2.4.03/testdir/minc2-label-test.c:110:21: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 110 | coords[0] = i; + | ^ +/build/libminc-2.4.03/testdir/minc2-label-test.c:111:21: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 111 | coords[1] = j; + | ^ +/build/libminc-2.4.03/testdir/minc2-label-test.c:112:21: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 112 | coords[2] = k; + | ^ +[ 90%] Linking C executable test_arg_parse +cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_arg_parse.dir/link.txt --verbose=1 +/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/test_arg_parse.dir/test_arg_parse.c.o -o test_arg_parse -Wl,-rpath,/build/libminc-2.4.03/obj-arm-linux-gnueabihf:/usr/lib/arm-linux-gnueabihf/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf /build/libminc-2.4.03/testdir/minc2-convert-test.c: In function 'main': /build/libminc-2.4.03/testdir/minc2-convert-test.c:97:29: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 97 | coords[0] = i; @@ -4782,61 +4871,41 @@ /build/libminc-2.4.03/testdir/minc2-convert-test.c:103:28: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'double' may change value [-Wconversion] 103 | voxel[2] = coords[2]; | ^~~~~~ -Scanning dependencies of target minc2-label-test make[3]: Leaving directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' -make -f testdir/CMakeFiles/minc2-label-test.dir/build.make testdir/CMakeFiles/minc2-label-test.dir/build -make[3]: Entering directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' -make[3]: Leaving directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' -[ 90%] Building C object testdir/CMakeFiles/minc2-label-test.dir/minc2-label-test.c.o -cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-label-test.dir/minc2-label-test.c.o -c /build/libminc-2.4.03/testdir/minc2-label-test.c -make[3]: Leaving directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' -[ 90%] Built target copy_xfm +[ 90%] Built target verify_xfm make -f testdir/CMakeFiles/minc2-datatype-test.dir/build.make testdir/CMakeFiles/minc2-datatype-test.dir/depend make[3]: Entering directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-arm-linux-gnueabihf /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc2-datatype-test.dir/DependInfo.cmake --color= +Dependee "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc2-datatype-test.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc2-datatype-test.dir/depend.internal". +Dependee "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc2-datatype-test.dir/depend.internal". +Scanning dependencies of target minc2-datatype-test +make[3]: Leaving directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' +make -f testdir/CMakeFiles/minc2-datatype-test.dir/build.make testdir/CMakeFiles/minc2-datatype-test.dir/build +make[3]: Entering directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' +[ 90%] Building C object testdir/CMakeFiles/minc2-datatype-test.dir/minc2-datatype-test.c.o +make[3]: Leaving directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' +cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-datatype-test.dir/minc2-datatype-test.c.o -c /build/libminc-2.4.03/testdir/minc2-datatype-test.c [ 90%] Built target test_arg_parse +[ 90%] Linking C executable minc2-convert-test make -f testdir/CMakeFiles/minc2-create-test-images-2.dir/build.make testdir/CMakeFiles/minc2-create-test-images-2.dir/depend +cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-convert-test.dir/link.txt --verbose=1 make[3]: Entering directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-arm-linux-gnueabihf /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc2-create-test-images-2.dir/DependInfo.cmake --color= -make[3]: Leaving directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' -Dependee "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc2-datatype-test.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc2-datatype-test.dir/depend.internal". -Dependee "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc2-datatype-test.dir/depend.internal". +/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-convert-test.dir/minc2-convert-test.c.o -o minc2-convert-test -Wl,-rpath,/build/libminc-2.4.03/obj-arm-linux-gnueabihf:/usr/lib/arm-linux-gnueabihf/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf Dependee "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc2-create-test-images-2.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc2-create-test-images-2.dir/depend.internal". Dependee "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc2-create-test-images-2.dir/depend.internal". Scanning dependencies of target minc2-create-test-images-2 +[ 90%] Linking C executable minc2-label-test make[3]: Leaving directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' -Scanning dependencies of target minc2-datatype-test make -f testdir/CMakeFiles/minc2-create-test-images-2.dir/build.make testdir/CMakeFiles/minc2-create-test-images-2.dir/build +cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-label-test.dir/link.txt --verbose=1 make[3]: Entering directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' -make[3]: Leaving directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' -[ 90%] Built target verify_xfm -make -f testdir/CMakeFiles/minc2-datatype-test.dir/build.make testdir/CMakeFiles/minc2-datatype-test.dir/build -make -f testdir/CMakeFiles/minc2-large-attribute.dir/build.make testdir/CMakeFiles/minc2-large-attribute.dir/depend -make[3]: Entering directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' -make[3]: Entering directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' -cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-arm-linux-gnueabihf /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc2-large-attribute.dir/DependInfo.cmake --color= -[ 90%] Building C object testdir/CMakeFiles/minc2-datatype-test.dir/minc2-datatype-test.c.o +/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-label-test.dir/minc2-label-test.c.o -o minc2-label-test -Wl,-rpath,/build/libminc-2.4.03/obj-arm-linux-gnueabihf:/usr/lib/arm-linux-gnueabihf/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf [ 90%] Building C object testdir/CMakeFiles/minc2-create-test-images-2.dir/minc2-create-test-images-2.c.o -Dependee "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc2-large-attribute.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc2-large-attribute.dir/depend.internal". -Dependee "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc2-large-attribute.dir/depend.internal". -/build/libminc-2.4.03/testdir/minc2-label-test.c: In function 'create_label_image': -/build/libminc-2.4.03/testdir/minc2-label-test.c:110:21: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 110 | coords[0] = i; - | ^ -/build/libminc-2.4.03/testdir/minc2-label-test.c:111:21: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 111 | coords[1] = j; - | ^ -/build/libminc-2.4.03/testdir/minc2-label-test.c:112:21: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 112 | coords[2] = k; - | ^ -cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-datatype-test.dir/minc2-datatype-test.c.o -c /build/libminc-2.4.03/testdir/minc2-datatype-test.c cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-create-test-images-2.dir/minc2-create-test-images-2.c.o -c /build/libminc-2.4.03/testdir/minc2-create-test-images-2.c -Scanning dependencies of target minc2-large-attribute -make[3]: Leaving directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' -make -f testdir/CMakeFiles/minc2-large-attribute.dir/build.make testdir/CMakeFiles/minc2-large-attribute.dir/build -make[3]: Entering directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' -[ 91%] Building C object testdir/CMakeFiles/minc2-large-attribute.dir/minc2-large-attribute.c.o -cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-large-attribute.dir/minc2-large-attribute.c.o -c /build/libminc-2.4.03/testdir/minc2-large-attribute.c +[ 91%] Linking C executable minc2-datatype-test +cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-datatype-test.dir/link.txt --verbose=1 +/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-datatype-test.dir/minc2-datatype-test.c.o -o minc2-datatype-test -Wl,-rpath,/build/libminc-2.4.03/obj-arm-linux-gnueabihf:/usr/lib/arm-linux-gnueabihf/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf /build/libminc-2.4.03/testdir/minc2-create-test-images-2.c: In function 'create_real_as_int_image': /build/libminc-2.4.03/testdir/minc2-create-test-images-2.c:78:16: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 78 | start[0] = i; @@ -4848,9 +4917,32 @@ /build/libminc-2.4.03/testdir/minc2-create-test-images-2.c:154:16: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 154 | start[0] = i; | ^ -[ 91%] Linking C executable minc2-convert-test -cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-convert-test.dir/link.txt --verbose=1 -/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-convert-test.dir/minc2-convert-test.c.o -o minc2-convert-test -Wl,-rpath,/build/libminc-2.4.03/obj-arm-linux-gnueabihf:/usr/lib/arm-linux-gnueabihf/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf +make[3]: Leaving directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' +[ 91%] Built target minc2-convert-test +make -f testdir/CMakeFiles/minc2-large-attribute.dir/build.make testdir/CMakeFiles/minc2-large-attribute.dir/depend +make[3]: Entering directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' +cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-arm-linux-gnueabihf /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc2-large-attribute.dir/DependInfo.cmake --color= +Dependee "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc2-large-attribute.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc2-large-attribute.dir/depend.internal". +Dependee "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc2-large-attribute.dir/depend.internal". +Scanning dependencies of target minc2-large-attribute +make[3]: Leaving directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' +make -f testdir/CMakeFiles/minc2-large-attribute.dir/build.make testdir/CMakeFiles/minc2-large-attribute.dir/build +make[3]: Entering directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' +make[3]: Leaving directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' +[ 92%] Building C object testdir/CMakeFiles/minc2-large-attribute.dir/minc2-large-attribute.c.o +cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-large-attribute.dir/minc2-large-attribute.c.o -c /build/libminc-2.4.03/testdir/minc2-large-attribute.c +[ 92%] Built target minc2-label-test +make -f testdir/CMakeFiles/minc2-full-test.dir/build.make testdir/CMakeFiles/minc2-full-test.dir/depend +make[3]: Entering directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' +cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-arm-linux-gnueabihf /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc2-full-test.dir/DependInfo.cmake --color= +Dependee "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc2-full-test.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc2-full-test.dir/depend.internal". +Dependee "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc2-full-test.dir/depend.internal". +Scanning dependencies of target minc2-full-test +make[3]: Leaving directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' +make -f testdir/CMakeFiles/minc2-full-test.dir/build.make testdir/CMakeFiles/minc2-full-test.dir/build +make[3]: Entering directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' +[ 92%] Building C object testdir/CMakeFiles/minc2-full-test.dir/minc2-full-test.c.o +cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-full-test.dir/minc2-full-test.c.o -c /build/libminc-2.4.03/testdir/minc2-full-test.c /build/libminc-2.4.03/testdir/minc2-large-attribute.c: In function 'create_3D_image': /build/libminc-2.4.03/testdir/minc2-large-attribute.c:84:16: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 84 | start[0] = i; @@ -4864,31 +4956,7 @@ /build/libminc-2.4.03/testdir/minc2-large-attribute.c:94:55: warning: conversion to 'size_t' {aka 'unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 94 | miset_attr_values(hvol,MI_TYPE_STRING,"test","test",attribute_size,attribute); | ^~~~~~~~~~~~~~ -[ 92%] Linking C executable minc2-datatype-test -cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-datatype-test.dir/link.txt --verbose=1 -/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-datatype-test.dir/minc2-datatype-test.c.o -o minc2-datatype-test -Wl,-rpath,/build/libminc-2.4.03/obj-arm-linux-gnueabihf:/usr/lib/arm-linux-gnueabihf/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf -[ 92%] Linking C executable minc2-label-test -cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-label-test.dir/link.txt --verbose=1 make[3]: Leaving directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' -[ 92%] Built target minc2-convert-test -make -f testdir/CMakeFiles/minc2-full-test.dir/build.make testdir/CMakeFiles/minc2-full-test.dir/depend -[ 92%] Linking C executable minc2-large-attribute -make[3]: Entering directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' -cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/testdir /build/libminc-2.4.03/obj-arm-linux-gnueabihf /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc2-full-test.dir/DependInfo.cmake --color= -cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-large-attribute.dir/link.txt --verbose=1 -/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-label-test.dir/minc2-label-test.c.o -o minc2-label-test -Wl,-rpath,/build/libminc-2.4.03/obj-arm-linux-gnueabihf:/usr/lib/arm-linux-gnueabihf/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf -/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-large-attribute.dir/minc2-large-attribute.c.o -o minc2-large-attribute -Wl,-rpath,/build/libminc-2.4.03/obj-arm-linux-gnueabihf:/usr/lib/arm-linux-gnueabihf/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf -Dependee "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc2-full-test.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc2-full-test.dir/depend.internal". -Dependee "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir/CMakeFiles/minc2-full-test.dir/depend.internal". -Scanning dependencies of target minc2-full-test -make[3]: Leaving directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' -make -f testdir/CMakeFiles/minc2-full-test.dir/build.make testdir/CMakeFiles/minc2-full-test.dir/build -make[3]: Entering directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' -[ 92%] Building C object testdir/CMakeFiles/minc2-full-test.dir/minc2-full-test.c.o -[ 93%] Linking C executable minc2-create-test-images-2 -cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-create-test-images-2.dir/link.txt --verbose=1 -cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/minc2-full-test.dir/minc2-full-test.c.o -c /build/libminc-2.4.03/testdir/minc2-full-test.c -/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-create-test-images-2.dir/minc2-create-test-images-2.c.o -o minc2-create-test-images-2 -Wl,-rpath,/build/libminc-2.4.03/obj-arm-linux-gnueabihf:/usr/lib/arm-linux-gnueabihf/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf /build/libminc-2.4.03/testdir/minc2-full-test.c: In function 'test1': /build/libminc-2.4.03/testdir/minc2-full-test.c:111:29: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 111 | coords[0] = i; @@ -4924,82 +4992,80 @@ /build/libminc-2.4.03/testdir/minc2-full-test.c:251:29: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 251 | coords[2] = k; | ^ -make[3]: Leaving directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' -[ 93%] Built target minc2-large-attribute +[ 92%] Built target minc2-datatype-test make -f ezminc/examples/CMakeFiles/create_grid_file.dir/build.make ezminc/examples/CMakeFiles/create_grid_file.dir/depend +[ 93%] Linking C executable minc2-create-test-images-2 make[3]: Entering directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/ezminc/examples /build/libminc-2.4.03/obj-arm-linux-gnueabihf /build/libminc-2.4.03/obj-arm-linux-gnueabihf/ezminc/examples /build/libminc-2.4.03/obj-arm-linux-gnueabihf/ezminc/examples/CMakeFiles/create_grid_file.dir/DependInfo.cmake --color= -make[3]: Leaving directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' +cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-create-test-images-2.dir/link.txt --verbose=1 Dependee "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/ezminc/examples/CMakeFiles/create_grid_file.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/ezminc/examples/CMakeFiles/create_grid_file.dir/depend.internal". Dependee "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/ezminc/examples/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/ezminc/examples/CMakeFiles/create_grid_file.dir/depend.internal". -[ 93%] Built target minc2-datatype-test -make -f ezminc/examples/CMakeFiles/volume_msq_dist.dir/build.make ezminc/examples/CMakeFiles/volume_msq_dist.dir/depend -make[3]: Entering directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' -cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/ezminc/examples /build/libminc-2.4.03/obj-arm-linux-gnueabihf /build/libminc-2.4.03/obj-arm-linux-gnueabihf/ezminc/examples /build/libminc-2.4.03/obj-arm-linux-gnueabihf/ezminc/examples/CMakeFiles/volume_msq_dist.dir/DependInfo.cmake --color= +/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-create-test-images-2.dir/minc2-create-test-images-2.c.o -o minc2-create-test-images-2 -Wl,-rpath,/build/libminc-2.4.03/obj-arm-linux-gnueabihf:/usr/lib/arm-linux-gnueabihf/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf Scanning dependencies of target create_grid_file make[3]: Leaving directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' -make[3]: Leaving directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' -make[3]: Leaving directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' make -f ezminc/examples/CMakeFiles/create_grid_file.dir/build.make ezminc/examples/CMakeFiles/create_grid_file.dir/build make[3]: Entering directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' +[ 93%] Linking C executable minc2-large-attribute +cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-large-attribute.dir/link.txt --verbose=1 +[ 94%] Building CXX object ezminc/examples/CMakeFiles/create_grid_file.dir/create_grid_file.cpp.o +cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/ezminc/examples && /usr/bin/c++ -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/create_grid_file.dir/create_grid_file.cpp.o -c /build/libminc-2.4.03/ezminc/examples/create_grid_file.cpp +/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-large-attribute.dir/minc2-large-attribute.c.o -o minc2-large-attribute -Wl,-rpath,/build/libminc-2.4.03/obj-arm-linux-gnueabihf:/usr/lib/arm-linux-gnueabihf/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf +[ 95%] Linking C executable minc2-full-test +cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-full-test.dir/link.txt --verbose=1 +/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-full-test.dir/minc2-full-test.c.o -o minc2-full-test -Wl,-rpath,/build/libminc-2.4.03/obj-arm-linux-gnueabihf:/usr/lib/arm-linux-gnueabihf/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf +make[3]: Leaving directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' +[ 95%] Built target minc2-create-test-images-2 +make -f ezminc/examples/CMakeFiles/volume_msq_dist.dir/build.make ezminc/examples/CMakeFiles/volume_msq_dist.dir/depend +make[3]: Entering directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' +cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/ezminc/examples /build/libminc-2.4.03/obj-arm-linux-gnueabihf /build/libminc-2.4.03/obj-arm-linux-gnueabihf/ezminc/examples /build/libminc-2.4.03/obj-arm-linux-gnueabihf/ezminc/examples/CMakeFiles/volume_msq_dist.dir/DependInfo.cmake --color= Dependee "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/ezminc/examples/CMakeFiles/volume_msq_dist.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/ezminc/examples/CMakeFiles/volume_msq_dist.dir/depend.internal". Dependee "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/ezminc/examples/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/ezminc/examples/CMakeFiles/volume_msq_dist.dir/depend.internal". Scanning dependencies of target volume_msq_dist -[ 93%] Built target minc2-label-test -[ 93%] Built target minc2-create-test-images-2 make[3]: Leaving directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' make -f ezminc/examples/CMakeFiles/volume_msq_dist.dir/build.make ezminc/examples/CMakeFiles/volume_msq_dist.dir/build -make -f ezminc/examples/CMakeFiles/volume_avg.dir/build.make ezminc/examples/CMakeFiles/volume_avg.dir/depend -make -f ezminc/examples/CMakeFiles/trilinear_resample.dir/build.make ezminc/examples/CMakeFiles/trilinear_resample.dir/depend make[3]: Entering directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' +make[3]: Leaving directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' +[ 95%] Building CXX object ezminc/examples/CMakeFiles/volume_msq_dist.dir/volume_msq_dist.cpp.o +cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/ezminc/examples && /usr/bin/c++ -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/volume_msq_dist.dir/volume_msq_dist.cpp.o -c /build/libminc-2.4.03/ezminc/examples/volume_msq_dist.cpp +[ 95%] Built target minc2-large-attribute +make -f ezminc/examples/CMakeFiles/volume_avg.dir/build.make ezminc/examples/CMakeFiles/volume_avg.dir/depend make[3]: Entering directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/ezminc/examples /build/libminc-2.4.03/obj-arm-linux-gnueabihf /build/libminc-2.4.03/obj-arm-linux-gnueabihf/ezminc/examples /build/libminc-2.4.03/obj-arm-linux-gnueabihf/ezminc/examples/CMakeFiles/volume_avg.dir/DependInfo.cmake --color= -[ 94%] Building CXX object ezminc/examples/CMakeFiles/create_grid_file.dir/create_grid_file.cpp.o -make[3]: Entering directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' -cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/ezminc/examples /build/libminc-2.4.03/obj-arm-linux-gnueabihf /build/libminc-2.4.03/obj-arm-linux-gnueabihf/ezminc/examples /build/libminc-2.4.03/obj-arm-linux-gnueabihf/ezminc/examples/CMakeFiles/trilinear_resample.dir/DependInfo.cmake --color= -cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/ezminc/examples && /usr/bin/c++ -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/create_grid_file.dir/create_grid_file.cpp.o -c /build/libminc-2.4.03/ezminc/examples/create_grid_file.cpp -[ 94%] Building CXX object ezminc/examples/CMakeFiles/volume_msq_dist.dir/volume_msq_dist.cpp.o -cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/ezminc/examples && /usr/bin/c++ -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/volume_msq_dist.dir/volume_msq_dist.cpp.o -c /build/libminc-2.4.03/ezminc/examples/volume_msq_dist.cpp Dependee "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/ezminc/examples/CMakeFiles/volume_avg.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/ezminc/examples/CMakeFiles/volume_avg.dir/depend.internal". Dependee "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/ezminc/examples/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/ezminc/examples/CMakeFiles/volume_avg.dir/depend.internal". -Dependee "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/ezminc/examples/CMakeFiles/trilinear_resample.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/ezminc/examples/CMakeFiles/trilinear_resample.dir/depend.internal". -Dependee "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/ezminc/examples/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/ezminc/examples/CMakeFiles/trilinear_resample.dir/depend.internal". Scanning dependencies of target volume_avg -Scanning dependencies of target trilinear_resample make[3]: Leaving directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' make -f ezminc/examples/CMakeFiles/volume_avg.dir/build.make ezminc/examples/CMakeFiles/volume_avg.dir/build -make[3]: Leaving directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' -make -f ezminc/examples/CMakeFiles/trilinear_resample.dir/build.make ezminc/examples/CMakeFiles/trilinear_resample.dir/build make[3]: Entering directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' -make[3]: Entering directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' -[ 94%] Building CXX object ezminc/examples/CMakeFiles/volume_avg.dir/volume_avg.cpp.o +[ 95%] Building CXX object ezminc/examples/CMakeFiles/volume_avg.dir/volume_avg.cpp.o cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/ezminc/examples && /usr/bin/c++ -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/volume_avg.dir/volume_avg.cpp.o -c /build/libminc-2.4.03/ezminc/examples/volume_avg.cpp -[ 95%] Building CXX object ezminc/examples/CMakeFiles/trilinear_resample.dir/trilinear_resample.cpp.o -cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/ezminc/examples && /usr/bin/c++ -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/trilinear_resample.dir/trilinear_resample.cpp.o -c /build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp -[ 96%] Linking C executable minc2-full-test -cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-full-test.dir/link.txt --verbose=1 -/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/minc2-full-test.dir/minc2-full-test.c.o -o minc2-full-test -Wl,-rpath,/build/libminc-2.4.03/obj-arm-linux-gnueabihf:/usr/lib/arm-linux-gnueabihf/hdf5/serial ../libminc2.so.5.2.0 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf make[3]: Leaving directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' -[ 96%] Built target minc2-full-test -make -f ezminc/tests/CMakeFiles/ezminc_rw_test2.dir/build.make ezminc/tests/CMakeFiles/ezminc_rw_test2.dir/depend +[ 95%] Built target minc2-full-test +make -f ezminc/examples/CMakeFiles/trilinear_resample.dir/build.make ezminc/examples/CMakeFiles/trilinear_resample.dir/depend make[3]: Entering directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' -cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/ezminc/tests /build/libminc-2.4.03/obj-arm-linux-gnueabihf /build/libminc-2.4.03/obj-arm-linux-gnueabihf/ezminc/tests /build/libminc-2.4.03/obj-arm-linux-gnueabihf/ezminc/tests/CMakeFiles/ezminc_rw_test2.dir/DependInfo.cmake --color= -Dependee "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/ezminc/tests/CMakeFiles/ezminc_rw_test2.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/ezminc/tests/CMakeFiles/ezminc_rw_test2.dir/depend.internal". -Dependee "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/ezminc/tests/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/ezminc/tests/CMakeFiles/ezminc_rw_test2.dir/depend.internal". -Scanning dependencies of target ezminc_rw_test2 +cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/ezminc/examples /build/libminc-2.4.03/obj-arm-linux-gnueabihf /build/libminc-2.4.03/obj-arm-linux-gnueabihf/ezminc/examples /build/libminc-2.4.03/obj-arm-linux-gnueabihf/ezminc/examples/CMakeFiles/trilinear_resample.dir/DependInfo.cmake --color= +Dependee "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/ezminc/examples/CMakeFiles/trilinear_resample.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/ezminc/examples/CMakeFiles/trilinear_resample.dir/depend.internal". +Dependee "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/ezminc/examples/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/ezminc/examples/CMakeFiles/trilinear_resample.dir/depend.internal". +Scanning dependencies of target trilinear_resample make[3]: Leaving directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' -make -f ezminc/tests/CMakeFiles/ezminc_rw_test2.dir/build.make ezminc/tests/CMakeFiles/ezminc_rw_test2.dir/build +make -f ezminc/examples/CMakeFiles/trilinear_resample.dir/build.make ezminc/examples/CMakeFiles/trilinear_resample.dir/build make[3]: Entering directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' -[ 96%] Building CXX object ezminc/tests/CMakeFiles/ezminc_rw_test2.dir/minc_rw_test2.cpp.o -cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/ezminc/tests && /usr/bin/c++ -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/ezminc_rw_test2.dir/minc_rw_test2.cpp.o -c /build/libminc-2.4.03/ezminc/tests/minc_rw_test2.cpp +[ 96%] Building CXX object ezminc/examples/CMakeFiles/trilinear_resample.dir/trilinear_resample.cpp.o +cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/ezminc/examples && /usr/bin/c++ -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/trilinear_resample.dir/trilinear_resample.cpp.o -c /build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp +/build/libminc-2.4.03/ezminc/examples/create_grid_file.cpp: In function 'int main(int, char**)': +/build/libminc-2.4.03/ezminc/examples/create_grid_file.cpp:115:17: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] + 115 | def[0]=amp*sin(M_PI*pos[0]/100.0); + | ~~~^~~~~~~~~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/ezminc/examples/create_grid_file.cpp:116:17: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] + 116 | def[1]=amp*sin(2*M_PI*pos[1]/100.0); + | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~ +/build/libminc-2.4.03/ezminc/examples/create_grid_file.cpp:117:17: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] + 117 | def[2]=amp*cos(3*M_PI*pos[2]/100.0); + | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /build/libminc-2.4.03/ezminc/examples/volume_avg.cpp: In function 'int main(int, char**)': /build/libminc-2.4.03/ezminc/examples/volume_avg.cpp:128:47: warning: conversion from 'int' to 'float' may change value [-Wconversion] 128 | _sd.c_buf()[i]=sqrt(_sd.c_buf()[i]/(argc-1) - _avg.c_buf()[i]*_avg.c_buf()[i] ); | ~~~~~^~~ -/build/libminc-2.4.03/ezminc/tests/minc_rw_test2.cpp: In function 'int main(int, char**)': -/build/libminc-2.4.03/ezminc/tests/minc_rw_test2.cpp:27:25: warning: conversion from 'size_t' {aka 'unsigned int'} to 'float' may change value [-Wconversion] - 27 | vol(x,y,z)=x+y+z; - | ~~~^~ /build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp: In function 'int main(int, char**)': /build/libminc-2.4.03/ezminc/examples/trilinear_resample.cpp:90:48: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] 90 | old_step[i-1]=new_info[rdr.map_space(i)].step; @@ -5047,16 +5113,6 @@ /build/libminc-2.4.03/ezminc/minc_io_simple_volume.h:333:21: warning: conversion from 'size_t' {aka 'unsigned int'} to 'float' may change value [-Wconversion] 333 | float dz=_z-z; | ^ -/build/libminc-2.4.03/ezminc/examples/create_grid_file.cpp: In function 'int main(int, char**)': -/build/libminc-2.4.03/ezminc/examples/create_grid_file.cpp:115:17: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] - 115 | def[0]=amp*sin(M_PI*pos[0]/100.0); - | ~~~^~~~~~~~~~~~~~~~~~~~~~~ -/build/libminc-2.4.03/ezminc/examples/create_grid_file.cpp:116:17: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] - 116 | def[1]=amp*sin(2*M_PI*pos[1]/100.0); - | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -/build/libminc-2.4.03/ezminc/examples/create_grid_file.cpp:117:17: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] - 117 | def[2]=amp*cos(3*M_PI*pos[2]/100.0); - | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/10/vector:72, from /build/libminc-2.4.03/ezminc/minc_1_rw.h:18, from /build/libminc-2.4.03/ezminc/minc_1_simple.h:18, @@ -5072,11 +5128,27 @@ [ 97%] Linking CXX executable volume_msq_dist cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/ezminc/examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/volume_msq_dist.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/volume_msq_dist.dir/volume_msq_dist.cpp.o -o volume_msq_dist -Wl,-rpath,/build/libminc-2.4.03/obj-arm-linux-gnueabihf/ezminc:/build/libminc-2.4.03/obj-arm-linux-gnueabihf:/usr/lib/arm-linux-gnueabihf/hdf5/serial ../libminc_io.so.5.2.0 ../../libminc2.so.5.2.0 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -ldl -lm -lm -ldl -lrt -lnetcdf -[ 98%] Linking CXX executable ezminc_rw_test2 -cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/ezminc/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/ezminc_rw_test2.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/ezminc_rw_test2.dir/minc_rw_test2.cpp.o -o ezminc_rw_test2 -Wl,-rpath,/build/libminc-2.4.03/obj-arm-linux-gnueabihf/ezminc:/build/libminc-2.4.03/obj-arm-linux-gnueabihf:/usr/lib/arm-linux-gnueabihf/hdf5/serial ../libminc_io.so.5.2.0 ../../libminc2.so.5.2.0 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf make[3]: Leaving directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' -[ 98%] Built target volume_msq_dist +[ 97%] Built target volume_msq_dist +make -f ezminc/tests/CMakeFiles/ezminc_rw_test2.dir/build.make ezminc/tests/CMakeFiles/ezminc_rw_test2.dir/depend +make[3]: Entering directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' +cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/ezminc/tests /build/libminc-2.4.03/obj-arm-linux-gnueabihf /build/libminc-2.4.03/obj-arm-linux-gnueabihf/ezminc/tests /build/libminc-2.4.03/obj-arm-linux-gnueabihf/ezminc/tests/CMakeFiles/ezminc_rw_test2.dir/DependInfo.cmake --color= +Dependee "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/ezminc/tests/CMakeFiles/ezminc_rw_test2.dir/DependInfo.cmake" is newer than depender "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/ezminc/tests/CMakeFiles/ezminc_rw_test2.dir/depend.internal". +Dependee "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/ezminc/tests/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/libminc-2.4.03/obj-arm-linux-gnueabihf/ezminc/tests/CMakeFiles/ezminc_rw_test2.dir/depend.internal". +Scanning dependencies of target ezminc_rw_test2 +make[3]: Leaving directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' +make -f ezminc/tests/CMakeFiles/ezminc_rw_test2.dir/build.make ezminc/tests/CMakeFiles/ezminc_rw_test2.dir/build +make[3]: Entering directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' +[ 97%] Building CXX object ezminc/tests/CMakeFiles/ezminc_rw_test2.dir/minc_rw_test2.cpp.o +cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/ezminc/tests && /usr/bin/c++ -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/ezminc_rw_test2.dir/minc_rw_test2.cpp.o -c /build/libminc-2.4.03/ezminc/tests/minc_rw_test2.cpp +[ 97%] Linking CXX executable create_grid_file +cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/ezminc/examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/create_grid_file.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/create_grid_file.dir/create_grid_file.cpp.o -o create_grid_file -Wl,-rpath,/build/libminc-2.4.03/obj-arm-linux-gnueabihf/ezminc:/build/libminc-2.4.03/obj-arm-linux-gnueabihf:/usr/lib/arm-linux-gnueabihf/hdf5/serial ../libminc_io.so.5.2.0 ../../libminc2.so.5.2.0 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -ldl -lm -lm -ldl -lrt -lnetcdf +[ 98%] Linking CXX executable volume_avg +cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/ezminc/examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/volume_avg.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/volume_avg.dir/volume_avg.cpp.o -o volume_avg -Wl,-rpath,/build/libminc-2.4.03/obj-arm-linux-gnueabihf/ezminc:/build/libminc-2.4.03/obj-arm-linux-gnueabihf:/usr/lib/arm-linux-gnueabihf/hdf5/serial ../libminc_io.so.5.2.0 ../../libminc2.so.5.2.0 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -ldl -lm -lm -ldl -lrt -lnetcdf +make[3]: Leaving directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' +[ 98%] Built target create_grid_file make -f ezminc/tests/CMakeFiles/ezminc_rw_test.dir/build.make ezminc/tests/CMakeFiles/ezminc_rw_test.dir/depend make[3]: Entering directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.03 /build/libminc-2.4.03/ezminc/tests /build/libminc-2.4.03/obj-arm-linux-gnueabihf /build/libminc-2.4.03/obj-arm-linux-gnueabihf/ezminc/tests /build/libminc-2.4.03/obj-arm-linux-gnueabihf/ezminc/tests/CMakeFiles/ezminc_rw_test.dir/DependInfo.cmake --color= @@ -5088,18 +5160,17 @@ make[3]: Entering directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' [ 99%] Building CXX object ezminc/tests/CMakeFiles/ezminc_rw_test.dir/ezminc_rw_test.cpp.o cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/ezminc/tests && /usr/bin/c++ -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.03 -I/build/libminc-2.4.03/obj-arm-linux-gnueabihf -I/build/libminc-2.4.03/libcommon -I/build/libminc-2.4.03/libsrc2 -I/build/libminc-2.4.03/libsrc -I/build/libminc-2.4.03/volume_io/Include -I/build/libminc-2.4.03/ezminc -I/usr/include/hdf5/serial -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -o CMakeFiles/ezminc_rw_test.dir/ezminc_rw_test.cpp.o -c /build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp +[ 99%] Linking CXX executable trilinear_resample +cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/ezminc/examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/trilinear_resample.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/trilinear_resample.dir/trilinear_resample.cpp.o -o trilinear_resample -Wl,-rpath,/build/libminc-2.4.03/obj-arm-linux-gnueabihf/ezminc:/build/libminc-2.4.03/obj-arm-linux-gnueabihf:/usr/lib/arm-linux-gnueabihf/hdf5/serial ../libminc_io.so.5.2.0 ../../libminc2.so.5.2.0 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -ldl -lm -lm -ldl -lrt -lnetcdf make[3]: Leaving directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' -[ 99%] Built target ezminc_rw_test2 -[ 99%] Linking CXX executable create_grid_file -[100%] Linking CXX executable volume_avg -cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/ezminc/examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/create_grid_file.dir/link.txt --verbose=1 -cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/ezminc/examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/volume_avg.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/create_grid_file.dir/create_grid_file.cpp.o -o create_grid_file -Wl,-rpath,/build/libminc-2.4.03/obj-arm-linux-gnueabihf/ezminc:/build/libminc-2.4.03/obj-arm-linux-gnueabihf:/usr/lib/arm-linux-gnueabihf/hdf5/serial ../libminc_io.so.5.2.0 ../../libminc2.so.5.2.0 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -ldl -lm -lm -ldl -lrt -lnetcdf -/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/volume_avg.dir/volume_avg.cpp.o -o volume_avg -Wl,-rpath,/build/libminc-2.4.03/obj-arm-linux-gnueabihf/ezminc:/build/libminc-2.4.03/obj-arm-linux-gnueabihf:/usr/lib/arm-linux-gnueabihf/hdf5/serial ../libminc_io.so.5.2.0 ../../libminc2.so.5.2.0 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -ldl -lm -lm -ldl -lrt -lnetcdf -make[3]: Leaving directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' -[100%] Built target create_grid_file +[ 99%] Built target volume_avg +/build/libminc-2.4.03/ezminc/tests/minc_rw_test2.cpp: In function 'int main(int, char**)': +/build/libminc-2.4.03/ezminc/tests/minc_rw_test2.cpp:27:25: warning: conversion from 'size_t' {aka 'unsigned int'} to 'float' may change value [-Wconversion] + 27 | vol(x,y,z)=x+y+z; + | ~~~^~ make[3]: Leaving directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' -[100%] Built target volume_avg +[ 99%] Built target trilinear_resample /build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp: In instantiation of 'void make_rw_test(const char*, int, nc_type, bool, double) [with TPixel = unsigned char; nc_type = int]': /build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:181:68: required from here /build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:44:52: warning: conversion from 'double' to '__gnu_cxx::__alloc_traits, unsigned char>::value_type' {aka 'unsigned char'} may change value [-Wfloat-conversion] @@ -5127,11 +5198,11 @@ /build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp: In instantiation of 'void make_rw_test(const char*, int, nc_type, bool, double) [with TPixel = double; nc_type = int]': /build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:190:64: required from here /build/libminc-2.4.03/ezminc/tests/ezminc_rw_test.cpp:59:19: warning: conversion from 'int' to '__gnu_cxx::__alloc_traits, short int>::value_type' {aka 'short int'} may change value [-Wconversion] -[100%] Linking CXX executable trilinear_resample -cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/ezminc/examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/trilinear_resample.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/trilinear_resample.dir/trilinear_resample.cpp.o -o trilinear_resample -Wl,-rpath,/build/libminc-2.4.03/obj-arm-linux-gnueabihf/ezminc:/build/libminc-2.4.03/obj-arm-linux-gnueabihf:/usr/lib/arm-linux-gnueabihf/hdf5/serial ../libminc_io.so.5.2.0 ../../libminc2.so.5.2.0 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -ldl -lm -lm -ldl -lrt -lnetcdf +[100%] Linking CXX executable ezminc_rw_test2 +cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/ezminc/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/ezminc_rw_test2.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/ezminc_rw_test2.dir/minc_rw_test2.cpp.o -o ezminc_rw_test2 -Wl,-rpath,/build/libminc-2.4.03/obj-arm-linux-gnueabihf/ezminc:/build/libminc-2.4.03/obj-arm-linux-gnueabihf:/usr/lib/arm-linux-gnueabihf/hdf5/serial ../libminc_io.so.5.2.0 ../../libminc2.so.5.2.0 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf make[3]: Leaving directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' -[100%] Built target trilinear_resample +[100%] Built target ezminc_rw_test2 [100%] Linking CXX executable ezminc_rw_test cd /build/libminc-2.4.03/obj-arm-linux-gnueabihf/ezminc/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/ezminc_rw_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/libminc-2.4.03=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/ezminc_rw_test.dir/ezminc_rw_test.cpp.o -o ezminc_rw_test -Wl,-rpath,/build/libminc-2.4.03/obj-arm-linux-gnueabihf/ezminc:/build/libminc-2.4.03/obj-arm-linux-gnueabihf:/usr/lib/arm-linux-gnueabihf/hdf5/serial ../libminc_io.so.5.2.0 ../../libminc2.so.5.2.0 /usr/lib/arm-linux-gnueabihf/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm -lz -lm -ldl -lrt -lnetcdf -ldl -lm -lm -ldl -lrt -lnetcdf @@ -5149,119 +5220,119 @@ /usr/bin/ctest --force-new-ctest-process -j1 Test project /build/libminc-2.4.03/obj-arm-linux-gnueabihf Start 1: ezminc_rw_test - 1/52 Test #1: ezminc_rw_test ................... Passed 0.17 sec + 1/52 Test #1: ezminc_rw_test ................... Passed 0.25 sec Start 2: minc_types-1 - 2/52 Test #2: minc_types-1 ..................... Passed 0.16 sec + 2/52 Test #2: minc_types-1 ..................... Passed 0.38 sec Start 3: minc_types-2 - 3/52 Test #3: minc_types-2 ..................... Passed 1.00 sec + 3/52 Test #3: minc_types-2 ..................... Passed 0.77 sec Start 4: icv_dim1-1 - 4/52 Test #4: icv_dim1-1 ....................... Passed 0.07 sec + 4/52 Test #4: icv_dim1-1 ....................... Passed 0.03 sec Start 5: icv_dim1-2 - 5/52 Test #5: icv_dim1-2 ....................... Passed 0.09 sec + 5/52 Test #5: icv_dim1-2 ....................... Passed 0.04 sec Start 6: icv_dim-1 - 6/52 Test #6: icv_dim-1 ........................ Passed 0.07 sec + 6/52 Test #6: icv_dim-1 ........................ Passed 0.03 sec Start 7: icv_dim-2 - 7/52 Test #7: icv_dim-2 ........................ Passed 0.10 sec + 7/52 Test #7: icv_dim-2 ........................ Passed 0.05 sec Start 8: icv_fillvalue-1 - 8/52 Test #8: icv_fillvalue-1 .................. Passed 0.07 sec + 8/52 Test #8: icv_fillvalue-1 .................. Passed 0.03 sec Start 9: icv_fillvalue-2 - 9/52 Test #9: icv_fillvalue-2 .................. Passed 0.07 sec + 9/52 Test #9: icv_fillvalue-2 .................. Passed 0.04 sec Start 10: icv_range-1 -10/52 Test #10: icv_range-1 ...................... Passed 0.13 sec +10/52 Test #10: icv_range-1 ...................... Passed 0.07 sec Start 11: icv_range-2 -11/52 Test #11: icv_range-2 ...................... Passed 0.41 sec +11/52 Test #11: icv_range-2 ...................... Passed 0.40 sec Start 12: arg_parse -12/52 Test #12: arg_parse ........................ Passed 1.10 sec +12/52 Test #12: arg_parse ........................ Passed 0.95 sec Start 13: icv -13/52 Test #13: icv .............................. Passed 0.06 sec +13/52 Test #13: icv .............................. Passed 0.03 sec Start 14: icv_vec -14/52 Test #14: icv_vec .......................... Passed 0.08 sec +14/52 Test #14: icv_vec .......................... Passed 0.04 sec Start 15: minc -15/52 Test #15: minc ............................. Passed 0.06 sec +15/52 Test #15: minc ............................. Passed 0.03 sec Start 16: mincapi -16/52 Test #16: mincapi .......................... Passed 0.34 sec +16/52 Test #16: mincapi .......................... Passed 0.17 sec Start 17: test_mconv -17/52 Test #17: test_mconv ....................... Passed 0.07 sec +17/52 Test #17: test_mconv ....................... Passed 0.04 sec Start 18: minc_long_attr_10k -18/52 Test #18: minc_long_attr_10k ............... Passed 0.33 sec +18/52 Test #18: minc_long_attr_10k ............... Passed 0.25 sec Start 19: minc_long_attr_100k -19/52 Test #19: minc_long_attr_100k .............. Passed 0.33 sec +19/52 Test #19: minc_long_attr_100k .............. Passed 0.49 sec Start 20: minc_long_attr_1m -20/52 Test #20: minc_long_attr_1m ................ Passed 0.35 sec +20/52 Test #20: minc_long_attr_1m ................ Passed 0.26 sec Start 21: minc_conversion -21/52 Test #21: minc_conversion .................. Passed 0.38 sec +21/52 Test #21: minc_conversion .................. Passed 0.15 sec Start 22: volume_test-1 -22/52 Test #22: volume_test-1 .................... Passed 8.15 sec +22/52 Test #22: volume_test-1 .................... Passed 6.63 sec Start 23: volume_multidim_test -23/52 Test #23: volume_multidim_test ............. Passed 5.43 sec +23/52 Test #23: volume_multidim_test ............. Passed 4.50 sec Start 24: test_xfm_1 -24/52 Test #24: test_xfm_1 ....................... Passed 0.08 sec +24/52 Test #24: test_xfm_1 ....................... Passed 0.04 sec Start 25: test_xfm_2 -25/52 Test #25: test_xfm_2 ....................... Passed 0.07 sec +25/52 Test #25: test_xfm_2 ....................... Passed 0.04 sec Start 26: test_xfm_3 -26/52 Test #26: test_xfm_3 ....................... Passed 0.26 sec +26/52 Test #26: test_xfm_3 ....................... Passed 0.15 sec Start 27: copy_xfm -27/52 Test #27: copy_xfm ......................... Passed 0.19 sec +27/52 Test #27: copy_xfm ......................... Passed 0.18 sec Start 28: verify_xfm_1 -28/52 Test #28: verify_xfm_1 ..................... Passed 0.12 sec +28/52 Test #28: verify_xfm_1 ..................... Passed 0.21 sec Start 29: verify_xfm_float -29/52 Test #29: verify_xfm_float ................. Passed 0.13 sec +29/52 Test #29: verify_xfm_float ................. Passed 0.12 sec Start 30: verify_xfm_short -30/52 Test #30: verify_xfm_short ................. Passed 0.12 sec +30/52 Test #30: verify_xfm_short ................. Passed 0.04 sec Start 31: verify_xfm_byte -31/52 Test #31: verify_xfm_byte .................. Passed 0.13 sec +31/52 Test #31: verify_xfm_byte .................. Passed 0.05 sec Start 32: verify_xfm_2 -32/52 Test #32: verify_xfm_2 ..................... Passed 0.11 sec +32/52 Test #32: verify_xfm_2 ..................... Passed 0.04 sec Start 33: test_arg_parse -33/52 Test #33: test_arg_parse ................... Passed 0.05 sec +33/52 Test #33: test_arg_parse ................... Passed 0.02 sec Start 34: minc2-convert-test -34/52 Test #34: minc2-convert-test ............... Passed 111.73 sec +34/52 Test #34: minc2-convert-test ............... Passed 112.12 sec Start 35: minc2-create-test-images -35/52 Test #35: minc2-create-test-images ......... Passed 0.48 sec +35/52 Test #35: minc2-create-test-images ......... Passed 5.45 sec Start 36: minc2-create-test-images-2 -36/52 Test #36: minc2-create-test-images-2 ....... Passed 0.64 sec +36/52 Test #36: minc2-create-test-images-2 ....... Passed 1.64 sec Start 37: minc2-large-attribute-10k -37/52 Test #37: minc2-large-attribute-10k ........ Passed 0.13 sec +37/52 Test #37: minc2-large-attribute-10k ........ Passed 0.07 sec Start 38: minc2-large-attribute-100k -38/52 Test #38: minc2-large-attribute-100k ....... Passed 0.14 sec +38/52 Test #38: minc2-large-attribute-100k ....... Passed 0.11 sec Start 39: minc2-large-attribute-1m -39/52 Test #39: minc2-large-attribute-1m ......... Passed 0.12 sec +39/52 Test #39: minc2-large-attribute-1m ......... Passed 0.17 sec Start 40: minc2-datatype-test -40/52 Test #40: minc2-datatype-test .............. Passed 12.53 sec +40/52 Test #40: minc2-datatype-test .............. Passed 10.82 sec Start 41: minc2-full-test -41/52 Test #41: minc2-full-test .................. Passed 9.13 sec +41/52 Test #41: minc2-full-test .................. Passed 8.82 sec Start 42: minc2-grpattr-test -42/52 Test #42: minc2-grpattr-test ............... Passed 0.11 sec +42/52 Test #42: minc2-grpattr-test ............... Passed 0.04 sec Start 43: minc2-hyper-test-2 -43/52 Test #43: minc2-hyper-test-2 ............... Passed 0.56 sec +43/52 Test #43: minc2-hyper-test-2 ............... Passed 0.40 sec Start 44: minc2-hyper-test -44/52 Test #44: minc2-hyper-test ................. Passed 0.23 sec +44/52 Test #44: minc2-hyper-test ................. Passed 0.25 sec Start 45: minc2-label-test -45/52 Test #45: minc2-label-test ................. Passed 0.13 sec +45/52 Test #45: minc2-label-test ................. Passed 0.16 sec Start 46: minc2-multires-test -46/52 Test #46: minc2-multires-test .............. Passed 18.71 sec +46/52 Test #46: minc2-multires-test .............. Passed 14.43 sec Start 47: minc2-record-test -47/52 Test #47: minc2-record-test ................ Passed 0.19 sec +47/52 Test #47: minc2-record-test ................ Passed 0.29 sec Start 48: minc2-slice-test -48/52 Test #48: minc2-slice-test ................. Passed 0.11 sec +48/52 Test #48: minc2-slice-test ................. Passed 0.05 sec Start 49: minc2-valid-test -49/52 Test #49: minc2-valid-test ................. Passed 0.10 sec +49/52 Test #49: minc2-valid-test ................. Passed 0.08 sec Start 50: minc2-vector_dimension-test -50/52 Test #50: minc2-vector_dimension-test ...... Passed 4.35 sec +50/52 Test #50: minc2-vector_dimension-test ...... Passed 2.82 sec Start 51: minc2-volprops-test -51/52 Test #51: minc2-volprops-test .............. Passed 0.05 sec +51/52 Test #51: minc2-volprops-test .............. Passed 0.02 sec Start 52: minc2-leak-test -52/52 Test #52: minc2-leak-test .................. Passed 135.68 sec +52/52 Test #52: minc2-leak-test .................. Passed 133.11 sec 100% tests passed, 0 tests failed out of 52 -Total Test time (real) = 315.51 sec +Total Test time (real) = 307.73 sec make[2]: Leaving directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' make[1]: Leaving directory '/build/libminc-2.4.03' create-stamp debian/debhelper-build-stamp dh_prep dh_auto_install - cd obj-arm-linux-gnueabihf && make -j5 install DESTDIR=/build/libminc-2.4.03/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" + cd obj-arm-linux-gnueabihf && make -j4 install DESTDIR=/build/libminc-2.4.03/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/libminc-2.4.03/obj-arm-linux-gnueabihf' /usr/bin/cmake -S/build/libminc-2.4.03 -B/build/libminc-2.4.03/obj-arm-linux-gnueabihf --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 preinstall @@ -5341,9 +5412,9 @@ dh_gencontrol dh_md5sums dh_builddeb -dpkg-deb: building package 'libminc2-5.2.0' in '../libminc2-5.2.0_2.4.03-3_armhf.deb'. dpkg-deb: building package 'libminc2-5.2.0-dbgsym' in '../libminc2-5.2.0-dbgsym_2.4.03-3_armhf.deb'. dpkg-deb: building package 'libminc-dev' in '../libminc-dev_2.4.03-3_armhf.deb'. +dpkg-deb: building package 'libminc2-5.2.0' in '../libminc2-5.2.0_2.4.03-3_armhf.deb'. dpkg-genbuildinfo --build=binary dpkg-genchanges --build=binary >../libminc_2.4.03-3_armhf.changes dpkg-genchanges: info: binary-only upload (no source code included) @@ -5351,12 +5422,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/18129/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/18129/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/22954 and its subdirectories -I: Current time: Thu Jul 29 08:52:23 -12 2021 -I: pbuilder-time-stamp: 1627591943 +I: removing directory /srv/workspace/pbuilder/18129 and its subdirectories +I: Current time: Fri Jul 30 11:02:15 +14 2021 +I: pbuilder-time-stamp: 1627592535