Diff of the two buildlogs: -- --- b1/build.log 2021-07-28 23:53:22.817266833 +0000 +++ b2/build.log 2021-07-28 23:56:36.189956542 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Tue Aug 30 18:14:56 -12 2022 -I: pbuilder-time-stamp: 1661926496 +I: Current time: Thu Jul 29 13:53:26 +14 2021 +I: pbuilder-time-stamp: 1627516406 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bullseye-reproducible-base.tgz] I: copying local configuration @@ -16,8 +16,8 @@ I: copying [./squizz_0.99d+dfsg-3.debian.tar.xz] I: Extracting source gpgv: unknown type of key resource 'trustedkeys.kbx' -gpgv: keyblock resource '/tmp/dpkg-verify-sig.uJxrMr0K/trustedkeys.kbx': General error -gpgv: Signature made Sat Aug 15 01:26:15 2020 -12 +gpgv: keyblock resource '/tmp/dpkg-verify-sig._6noyNy4/trustedkeys.kbx': General error +gpgv: Signature made Sun Aug 16 03:26:15 2020 +14 gpgv: using RSA key 3E99A526F5DCC0CBBF1CEEA600BAE74B343369F1 gpgv: issuer "npatra974@gmail.com" gpgv: Can't check signature: No public key @@ -30,135 +30,169 @@ dpkg-source: info: applying disable-swissprot-test.patch I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/659/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/21940/tmp/hooks/D01_modify_environment starting +debug: Running on codethink10-arm64. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +Removing 'diversion of /bin/sh to /bin/sh.distrib by dash' +Adding 'diversion of /bin/sh to /bin/sh.distrib by bash' +Removing 'diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by dash' +Adding 'diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by bash' +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/21940/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/21940/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='arm64' - DEBIAN_FRONTEND='noninteractive' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:hostcomplete:interactive_comments:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="1" [2]="4" [3]="1" [4]="release" [5]="aarch64-unknown-linux-gnu") + BASH_VERSION='5.1.4(1)-release' + BUILDDIR=/build + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=arm64 + DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all,-fixfilepath parallel=8' - DISTRIBUTION='' - HOME='/var/lib/jenkins' - HOST_ARCH='arm64' + DIRSTACK=() + DISTRIBUTION= + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/var/lib/jenkins + HOSTNAME=i-capture-the-hostname + HOSTTYPE=aarch64 + HOST_ARCH=arm64 IFS=' ' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='659' - PS1='# ' - PS2='> ' + LANG=C + LANGUAGE=nl_BE:nl + LC_ALL=C + MACHTYPE=aarch64-unknown-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=21940 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/tmp.G4jcltOcQW/pbuilderrc_YQo4 --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bullseye-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/tmp.G4jcltOcQW/b1 --logfile b1/build.log squizz_0.99d+dfsg-3.dsc' - SUDO_GID='117' - SUDO_UID='110' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - USERNAME='root' - _='/usr/bin/systemd-run' - http_proxy='http://192.168.101.16:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/tmp.G4jcltOcQW/pbuilderrc_cOib --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bullseye-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/tmp.G4jcltOcQW/b2 --logfile b2/build.log --extrapackages usrmerge squizz_0.99d+dfsg-3.dsc' + SUDO_GID=117 + SUDO_UID=110 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + USERNAME=root + _='I: set' + http_proxy=http://192.168.101.16:3128 I: uname -a - Linux codethink11-arm64 4.15.0-151-generic #157-Ubuntu SMP Fri Jul 9 21:03:48 UTC 2021 aarch64 GNU/Linux + Linux i-capture-the-hostname 4.15.0-151-generic #157-Ubuntu SMP Fri Jul 9 21:03:48 UTC 2021 aarch64 GNU/Linux I: ls -l /bin total 5252 - -rwxr-xr-x 1 root root 1282512 Jun 21 2021 bash - -rwxr-xr-x 3 root root 34808 Jul 20 2020 bunzip2 - -rwxr-xr-x 3 root root 34808 Jul 20 2020 bzcat - lrwxrwxrwx 1 root root 6 Jul 20 2020 bzcmp -> bzdiff - -rwxr-xr-x 1 root root 2225 Jul 20 2020 bzdiff - lrwxrwxrwx 1 root root 6 Jul 20 2020 bzegrep -> bzgrep - -rwxr-xr-x 1 root root 4877 Sep 4 2019 bzexe - lrwxrwxrwx 1 root root 6 Jul 20 2020 bzfgrep -> bzgrep - -rwxr-xr-x 1 root root 3775 Jul 20 2020 bzgrep - -rwxr-xr-x 3 root root 34808 Jul 20 2020 bzip2 - -rwxr-xr-x 1 root root 14264 Jul 20 2020 bzip2recover - lrwxrwxrwx 1 root root 6 Jul 20 2020 bzless -> bzmore - -rwxr-xr-x 1 root root 1297 Jul 20 2020 bzmore - -rwxr-xr-x 1 root root 39832 Sep 22 2020 cat - -rwxr-xr-x 1 root root 64512 Sep 22 2020 chgrp - -rwxr-xr-x 1 root root 60368 Sep 22 2020 chmod - -rwxr-xr-x 1 root root 64528 Sep 22 2020 chown - -rwxr-xr-x 1 root root 138896 Sep 22 2020 cp - -rwxr-xr-x 1 root root 129544 Dec 10 2020 dash - -rwxr-xr-x 1 root root 101384 Sep 22 2020 date - -rwxr-xr-x 1 root root 80984 Sep 22 2020 dd - -rwxr-xr-x 1 root root 89824 Sep 22 2020 df - -rwxr-xr-x 1 root root 143088 Sep 22 2020 dir - -rwxr-xr-x 1 root root 76152 Feb 7 2021 dmesg - lrwxrwxrwx 1 root root 8 Nov 6 2019 dnsdomainname -> hostname - lrwxrwxrwx 1 root root 8 Nov 6 2019 domainname -> hostname - -rwxr-xr-x 1 root root 35632 Sep 22 2020 echo - -rwxr-xr-x 1 root root 28 Nov 9 2020 egrep - -rwxr-xr-x 1 root root 31512 Sep 22 2020 false - -rwxr-xr-x 1 root root 28 Nov 9 2020 fgrep - -rwxr-xr-x 1 root root 64856 Feb 7 2021 findmnt - -rwsr-xr-x 1 root root 34824 Feb 26 2021 fusermount - -rwxr-xr-x 1 root root 178400 Nov 9 2020 grep - -rwxr-xr-x 2 root root 2346 Mar 2 2021 gunzip - -rwxr-xr-x 1 root root 6376 Mar 2 2021 gzexe - -rwxr-xr-x 1 root root 93744 Mar 2 2021 gzip - -rwxr-xr-x 1 root root 18440 Nov 6 2019 hostname - -rwxr-xr-x 1 root root 68720 Sep 22 2020 ln - -rwxr-xr-x 1 root root 52720 Feb 7 2020 login - -rwxr-xr-x 1 root root 143088 Sep 22 2020 ls - -rwxr-xr-x 1 root root 161960 Feb 7 2021 lsblk - -rwxr-xr-x 1 root root 85200 Sep 22 2020 mkdir - -rwxr-xr-x 1 root root 68744 Sep 22 2020 mknod - -rwxr-xr-x 1 root root 43976 Sep 22 2020 mktemp - -rwxr-xr-x 1 root root 51368 Feb 7 2021 more - -rwsr-xr-x 1 root root 51360 Feb 7 2021 mount - -rwxr-xr-x 1 root root 14496 Feb 7 2021 mountpoint - -rwxr-xr-x 1 root root 134808 Sep 22 2020 mv - lrwxrwxrwx 1 root root 8 Nov 6 2019 nisdomainname -> hostname - lrwxrwxrwx 1 root root 14 Apr 18 2021 pidof -> /sbin/killall5 - -rwxr-xr-x 1 root root 35720 Sep 22 2020 pwd - lrwxrwxrwx 1 root root 4 Jun 21 2021 rbash -> bash - -rwxr-xr-x 1 root root 43872 Sep 22 2020 readlink - -rwxr-xr-x 1 root root 68592 Sep 22 2020 rm - -rwxr-xr-x 1 root root 43880 Sep 22 2020 rmdir - -rwxr-xr-x 1 root root 19208 Sep 27 2020 run-parts - -rwxr-xr-x 1 root root 114016 Dec 22 2018 sed - lrwxrwxrwx 1 root root 4 Aug 30 03:47 sh -> dash - -rwxr-xr-x 1 root root 35656 Sep 22 2020 sleep - -rwxr-xr-x 1 root root 72640 Sep 22 2020 stty - -rwsr-xr-x 1 root root 67776 Feb 7 2021 su - -rwxr-xr-x 1 root root 35672 Sep 22 2020 sync - -rwxr-xr-x 1 root root 535768 Feb 16 2021 tar - -rwxr-xr-x 1 root root 10568 Sep 27 2020 tempfile - -rwxr-xr-x 1 root root 89120 Sep 22 2020 touch - -rwxr-xr-x 1 root root 31512 Sep 22 2020 true - -rwxr-xr-x 1 root root 14264 Feb 26 2021 ulockmgr_server - -rwsr-xr-x 1 root root 30880 Feb 7 2021 umount - -rwxr-xr-x 1 root root 35640 Sep 22 2020 uname - -rwxr-xr-x 2 root root 2346 Mar 2 2021 uncompress - -rwxr-xr-x 1 root root 143088 Sep 22 2020 vdir - -rwxr-xr-x 1 root root 59584 Feb 7 2021 wdctl - lrwxrwxrwx 1 root root 8 Nov 6 2019 ypdomainname -> hostname - -rwxr-xr-x 1 root root 1984 Mar 2 2021 zcat - -rwxr-xr-x 1 root root 1678 Mar 2 2021 zcmp - -rwxr-xr-x 1 root root 5880 Mar 2 2021 zdiff - -rwxr-xr-x 1 root root 29 Mar 2 2021 zegrep - -rwxr-xr-x 1 root root 29 Mar 2 2021 zfgrep - -rwxr-xr-x 1 root root 2081 Mar 2 2021 zforce - -rwxr-xr-x 1 root root 7585 Mar 2 2021 zgrep - -rwxr-xr-x 1 root root 2206 Mar 2 2021 zless - -rwxr-xr-x 1 root root 1842 Mar 2 2021 zmore - -rwxr-xr-x 1 root root 4553 Mar 2 2021 znew -I: user script /srv/workspace/pbuilder/659/tmp/hooks/D02_print_environment finished + -rwxr-xr-x 1 root root 1282512 Jun 22 16:26 bash + -rwxr-xr-x 3 root root 34808 Jul 21 2020 bunzip2 + -rwxr-xr-x 3 root root 34808 Jul 21 2020 bzcat + lrwxrwxrwx 1 root root 6 Jul 21 2020 bzcmp -> bzdiff + -rwxr-xr-x 1 root root 2225 Jul 21 2020 bzdiff + lrwxrwxrwx 1 root root 6 Jul 21 2020 bzegrep -> bzgrep + -rwxr-xr-x 1 root root 4877 Sep 5 2019 bzexe + lrwxrwxrwx 1 root root 6 Jul 21 2020 bzfgrep -> bzgrep + -rwxr-xr-x 1 root root 3775 Jul 21 2020 bzgrep + -rwxr-xr-x 3 root root 34808 Jul 21 2020 bzip2 + -rwxr-xr-x 1 root root 14264 Jul 21 2020 bzip2recover + lrwxrwxrwx 1 root root 6 Jul 21 2020 bzless -> bzmore + -rwxr-xr-x 1 root root 1297 Jul 21 2020 bzmore + -rwxr-xr-x 1 root root 39832 Sep 23 2020 cat + -rwxr-xr-x 1 root root 64512 Sep 23 2020 chgrp + -rwxr-xr-x 1 root root 60368 Sep 23 2020 chmod + -rwxr-xr-x 1 root root 64528 Sep 23 2020 chown + -rwxr-xr-x 1 root root 138896 Sep 23 2020 cp + -rwxr-xr-x 1 root root 129544 Dec 11 2020 dash + -rwxr-xr-x 1 root root 101384 Sep 23 2020 date + -rwxr-xr-x 1 root root 80984 Sep 23 2020 dd + -rwxr-xr-x 1 root root 89824 Sep 23 2020 df + -rwxr-xr-x 1 root root 143088 Sep 23 2020 dir + -rwxr-xr-x 1 root root 76152 Feb 8 04:38 dmesg + lrwxrwxrwx 1 root root 8 Nov 8 2019 dnsdomainname -> hostname + lrwxrwxrwx 1 root root 8 Nov 8 2019 domainname -> hostname + -rwxr-xr-x 1 root root 35632 Sep 23 2020 echo + -rwxr-xr-x 1 root root 28 Nov 10 2020 egrep + -rwxr-xr-x 1 root root 31512 Sep 23 2020 false + -rwxr-xr-x 1 root root 28 Nov 10 2020 fgrep + -rwxr-xr-x 1 root root 64856 Feb 8 04:38 findmnt + -rwsr-xr-x 1 root root 34824 Feb 27 06:12 fusermount + -rwxr-xr-x 1 root root 178400 Nov 10 2020 grep + -rwxr-xr-x 2 root root 2346 Mar 3 13:30 gunzip + -rwxr-xr-x 1 root root 6376 Mar 3 13:30 gzexe + -rwxr-xr-x 1 root root 93744 Mar 3 13:30 gzip + -rwxr-xr-x 1 root root 18440 Nov 8 2019 hostname + -rwxr-xr-x 1 root root 68720 Sep 23 2020 ln + -rwxr-xr-x 1 root root 52720 Feb 8 2020 login + -rwxr-xr-x 1 root root 143088 Sep 23 2020 ls + -rwxr-xr-x 1 root root 161960 Feb 8 04:38 lsblk + -rwxr-xr-x 1 root root 85200 Sep 23 2020 mkdir + -rwxr-xr-x 1 root root 68744 Sep 23 2020 mknod + -rwxr-xr-x 1 root root 43976 Sep 23 2020 mktemp + -rwxr-xr-x 1 root root 51368 Feb 8 04:38 more + -rwsr-xr-x 1 root root 51360 Feb 8 04:38 mount + -rwxr-xr-x 1 root root 14496 Feb 8 04:38 mountpoint + -rwxr-xr-x 1 root root 134808 Sep 23 2020 mv + lrwxrwxrwx 1 root root 8 Nov 8 2019 nisdomainname -> hostname + lrwxrwxrwx 1 root root 14 Apr 19 05:38 pidof -> /sbin/killall5 + -rwxr-xr-x 1 root root 35720 Sep 23 2020 pwd + lrwxrwxrwx 1 root root 4 Jun 22 16:26 rbash -> bash + -rwxr-xr-x 1 root root 43872 Sep 23 2020 readlink + -rwxr-xr-x 1 root root 68592 Sep 23 2020 rm + -rwxr-xr-x 1 root root 43880 Sep 23 2020 rmdir + -rwxr-xr-x 1 root root 19208 Sep 28 2020 run-parts + -rwxr-xr-x 1 root root 114016 Dec 23 2018 sed + lrwxrwxrwx 1 root root 4 Jul 29 13:53 sh -> bash + lrwxrwxrwx 1 root root 4 Jul 27 23:25 sh.distrib -> dash + -rwxr-xr-x 1 root root 35656 Sep 23 2020 sleep + -rwxr-xr-x 1 root root 72640 Sep 23 2020 stty + -rwsr-xr-x 1 root root 67776 Feb 8 04:38 su + -rwxr-xr-x 1 root root 35672 Sep 23 2020 sync + -rwxr-xr-x 1 root root 535768 Feb 17 23:55 tar + -rwxr-xr-x 1 root root 10568 Sep 28 2020 tempfile + -rwxr-xr-x 1 root root 89120 Sep 23 2020 touch + -rwxr-xr-x 1 root root 31512 Sep 23 2020 true + -rwxr-xr-x 1 root root 14264 Feb 27 06:12 ulockmgr_server + -rwsr-xr-x 1 root root 30880 Feb 8 04:38 umount + -rwxr-xr-x 1 root root 35640 Sep 23 2020 uname + -rwxr-xr-x 2 root root 2346 Mar 3 13:30 uncompress + -rwxr-xr-x 1 root root 143088 Sep 23 2020 vdir + -rwxr-xr-x 1 root root 59584 Feb 8 04:38 wdctl + lrwxrwxrwx 1 root root 8 Nov 8 2019 ypdomainname -> hostname + -rwxr-xr-x 1 root root 1984 Mar 3 13:30 zcat + -rwxr-xr-x 1 root root 1678 Mar 3 13:30 zcmp + -rwxr-xr-x 1 root root 5880 Mar 3 13:30 zdiff + -rwxr-xr-x 1 root root 29 Mar 3 13:30 zegrep + -rwxr-xr-x 1 root root 29 Mar 3 13:30 zfgrep + -rwxr-xr-x 1 root root 2081 Mar 3 13:30 zforce + -rwxr-xr-x 1 root root 7585 Mar 3 13:30 zgrep + -rwxr-xr-x 1 root root 2206 Mar 3 13:30 zless + -rwxr-xr-x 1 root root 1842 Mar 3 13:30 zmore + -rwxr-xr-x 1 root root 4553 Mar 3 13:30 znew +I: user script /srv/workspace/pbuilder/21940/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -225,7 +259,7 @@ Get: 29 http://deb.debian.org/debian bullseye/main arm64 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get: 30 http://deb.debian.org/debian bullseye/main arm64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 31 http://deb.debian.org/debian bullseye/main arm64 debhelper all 13.3.4 [1049 kB] -Fetched 17.9 MB in 0s (46.3 MB/s) +Fetched 17.9 MB in 0s (43.3 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package bsdextrautils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19646 files and directories currently installed.) @@ -364,8 +398,45 @@ Writing extended state information... Building tag database... -> Finished parsing the build-deps +Reading package lists... +Building dependency tree... +Reading state information... +The following additional packages will be installed: + libfile-find-rule-perl libnumber-compare-perl libtext-glob-perl +The following NEW packages will be installed: + libfile-find-rule-perl libnumber-compare-perl libtext-glob-perl usrmerge +0 upgraded, 4 newly installed, 0 to remove and 0 not upgraded. +Need to get 59.5 kB of archives. +After this operation, 157 kB of additional disk space will be used. +Get:1 http://deb.debian.org/debian bullseye/main arm64 libnumber-compare-perl all 0.03-1.1 [6956 B] +Get:2 http://deb.debian.org/debian bullseye/main arm64 libtext-glob-perl all 0.11-1 [8888 B] +Get:3 http://deb.debian.org/debian bullseye/main arm64 libfile-find-rule-perl all 0.34-1 [30.6 kB] +Get:4 http://deb.debian.org/debian bullseye/main arm64 usrmerge all 25 [13.0 kB] +debconf: delaying package configuration, since apt-utils is not installed +Fetched 59.5 kB in 0s (1149 kB/s) +Selecting previously unselected package libnumber-compare-perl. +(Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 21522 files and directories currently installed.) +Preparing to unpack .../libnumber-compare-perl_0.03-1.1_all.deb ... +Unpacking libnumber-compare-perl (0.03-1.1) ... +Selecting previously unselected package libtext-glob-perl. +Preparing to unpack .../libtext-glob-perl_0.11-1_all.deb ... +Unpacking libtext-glob-perl (0.11-1) ... +Selecting previously unselected package libfile-find-rule-perl. +Preparing to unpack .../libfile-find-rule-perl_0.34-1_all.deb ... +Unpacking libfile-find-rule-perl (0.34-1) ... +Selecting previously unselected package usrmerge. +Preparing to unpack .../archives/usrmerge_25_all.deb ... +Unpacking usrmerge (25) ... +Setting up libtext-glob-perl (0.11-1) ... +Setting up libnumber-compare-perl (0.03-1.1) ... +Setting up libfile-find-rule-perl (0.34-1) ... +Setting up usrmerge (25) ... +The system has been successfully converted. +Processing triggers for man-db (2.9.4-2) ... +Not building database; man-db/auto-update is not 'true'. I: Building the package -I: Running cd /build/squizz-0.99d+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../squizz_0.99d+dfsg-3_source.changes +hostname: Temporary failure in name resolution +I: Running cd /build/squizz-0.99d+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../squizz_0.99d+dfsg-3_source.changes dpkg-buildpackage: info: source package squizz dpkg-buildpackage: info: source version 0.99d+dfsg-3 dpkg-buildpackage: info: source distribution unstable @@ -394,7 +465,7 @@ ./configure --build=aarch64-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-option-checking --disable-silent-rules --libdir=\${prefix}/lib/aarch64-linux-gnu --runstatedir=/run --disable-maintainer-mode --disable-dependency-tracking checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes -checking for a thread-safe mkdir -p... /bin/mkdir -p +checking for a thread-safe mkdir -p... /usr/bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes @@ -414,10 +485,10 @@ checking build system type... aarch64-unknown-linux-gnu checking host system type... aarch64-unknown-linux-gnu checking how to print strings... printf -checking for a sed that does not truncate output... /bin/sed -checking for grep that handles long lines and -e... /bin/grep -checking for egrep... /bin/grep -E -checking for fgrep... /bin/grep -F +checking for a sed that does not truncate output... /usr/bin/sed +checking for grep that handles long lines and -e... /usr/bin/grep +checking for egrep... /usr/bin/grep -E +checking for fgrep... /usr/bin/grep -F checking for ld used by gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B @@ -437,8 +508,8 @@ checking for ranlib... ranlib checking command to parse /usr/bin/nm -B output from gcc object... ok checking for sysroot... no -checking for a working dd... /bin/dd -checking how to truncate binary pipes... /bin/dd bs=4096 count=1 +checking for a working dd... /usr/bin/dd +checking how to truncate binary pipes... /usr/bin/dd bs=4096 count=1 checking for mt... no checking if : is a manifest tool... no checking how to run the C preprocessor... gcc -E @@ -522,210 +593,210 @@ make[2]: Entering directory '/build/squizz-0.99d+dfsg/lib' make all-am make[3]: Entering directory '/build/squizz-0.99d+dfsg/lib' -/bin/bash ../libtool --tag=CC 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sequence/.libs/nbrfl.o -/bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/squizz-0.99d+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o sequence/codata.lo sequence/codata.c -libtool: compile: gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/squizz-0.99d+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c sequence/igl.c -o sequence/igl.o >/dev/null 2>&1 -libtool: compile: gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/squizz-0.99d+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c sequence/nbrf.c -o sequence/nbrf.o >/dev/null 2>&1 -/bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/squizz-0.99d+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o sequence/codatay.lo 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+/bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/squizz-0.99d+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o sequence/codatay.lo sequence/codatay.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/squizz-0.99d+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c sequence/codatay.c -fPIC -DPIC -o sequence/.libs/codatay.o +/bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/squizz-0.99d+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o sequence/codatal.lo sequence/codatal.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/squizz-0.99d+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c sequence/codatal.c -fPIC -DPIC -o 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-fdebug-prefix-map=/build/squizz-0.99d+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o align/parse.lo align/parse.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/squizz-0.99d+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c align/parse.c -fPIC -DPIC -o align/.libs/parse.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/squizz-0.99d+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c align/phylip.c -fPIC -DPIC -o align/.libs/phylip.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/squizz-0.99d+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c align/stocky.c -o align/stocky.o >/dev/null 2>&1 -libtool: compile: gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/squizz-0.99d+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c align/phylipil.c -o align/phylipil.o >/dev/null 2>&1 -libtool: compile: gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/squizz-0.99d+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c align/phylipsl.c -o align/phylipsl.o >/dev/null 2>&1 -libtool: compile: gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/squizz-0.99d+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c align/phylip.c -o align/phylip.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/squizz-0.99d+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c align/parse.c -o align/parse.o >/dev/null 2>&1 +/bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/squizz-0.99d+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o align/phylip.lo align/phylip.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/squizz-0.99d+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c align/phylip.c -fPIC -DPIC -o align/.libs/phylip.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/squizz-0.99d+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c align/phylip.c -o align/phylip.o >/dev/null 2>&1 +libtool: compile: gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/squizz-0.99d+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c align/phylipsl.c -o align/phylipsl.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/squizz-0.99d+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c align/stockl.c -o align/stockl.o >/dev/null 2>&1 -/bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/build/squizz-0.99d+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -o libbioseq.la -rpath /usr/lib/aarch64-linux-gnu sequence.lo sequence/embl.lo sequence/embly.lo sequence/embll.lo sequence/fasta.lo sequence/fastay.lo sequence/fastal.lo sequence/genbank.lo sequence/genbanky.lo sequence/genbankl.lo sequence/gcg.lo sequence/gcgy.lo sequence/gcgl.lo sequence/gde.lo sequence/gdey.lo sequence/gdel.lo sequence/ig.lo sequence/igy.lo sequence/igl.lo sequence/nbrf.lo sequence/nbrfy.lo sequence/nbrfl.lo sequence/codata.lo sequence/codatay.lo sequence/codatal.lo sequence/raw.lo sequence/rawy.lo sequence/rawl.lo sequence/sprot.lo sequence/sproty.lo sequence/sprotl.lo sequence/parse.lo sequence/protein.lo sequence/utils.lo extern/text.lo extern/file.lo -libtool: link: gcc -shared -fPIC -DPIC .libs/sequence.o sequence/.libs/embl.o sequence/.libs/embly.o sequence/.libs/embll.o sequence/.libs/fasta.o sequence/.libs/fastay.o sequence/.libs/fastal.o sequence/.libs/genbank.o sequence/.libs/genbanky.o sequence/.libs/genbankl.o sequence/.libs/gcg.o sequence/.libs/gcgy.o sequence/.libs/gcgl.o sequence/.libs/gde.o sequence/.libs/gdey.o sequence/.libs/gdel.o sequence/.libs/ig.o sequence/.libs/igy.o sequence/.libs/igl.o sequence/.libs/nbrf.o sequence/.libs/nbrfy.o sequence/.libs/nbrfl.o sequence/.libs/codata.o sequence/.libs/codatay.o sequence/.libs/codatal.o sequence/.libs/raw.o sequence/.libs/rawy.o sequence/.libs/rawl.o sequence/.libs/sprot.o sequence/.libs/sproty.o sequence/.libs/sprotl.o sequence/.libs/parse.o sequence/.libs/protein.o sequence/.libs/utils.o extern/.libs/text.o extern/.libs/file.o -g -O2 -fstack-protector-strong -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-soname -Wl,libbioseq.so.0 -o .libs/libbioseq.so.0.0.0 -libtool: link: (cd ".libs" && rm -f "libbioseq.so.0" && ln -s "libbioseq.so.0.0.0" "libbioseq.so.0") -libtool: link: (cd ".libs" && rm -f "libbioseq.so" && ln -s "libbioseq.so.0.0.0" "libbioseq.so") -libtool: link: ar cr .libs/libbioseq.a sequence.o sequence/embl.o sequence/embly.o sequence/embll.o sequence/fasta.o sequence/fastay.o sequence/fastal.o sequence/genbank.o sequence/genbanky.o sequence/genbankl.o sequence/gcg.o sequence/gcgy.o sequence/gcgl.o sequence/gde.o sequence/gdey.o sequence/gdel.o sequence/ig.o sequence/igy.o sequence/igl.o sequence/nbrf.o sequence/nbrfy.o sequence/nbrfl.o sequence/codata.o sequence/codatay.o sequence/codatal.o sequence/raw.o sequence/rawy.o sequence/rawl.o sequence/sprot.o sequence/sproty.o sequence/sprotl.o sequence/parse.o sequence/protein.o sequence/utils.o extern/text.o extern/file.o -libtool: link: ranlib .libs/libbioseq.a -libtool: link: ( cd ".libs" && rm -f "libbioseq.la" && ln -s "../libbioseq.la" "libbioseq.la" ) -/bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/build/squizz-0.99d+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -o libbioali.la -rpath /usr/lib/aarch64-linux-gnu align.lo align/clustal.lo align/clustaly.lo align/clustall.lo align/fasta2.lo align/mega.lo align/megay.lo align/megal.lo align/msf.lo align/msfy.lo align/msfl.lo align/nexusi.lo align/nexusiy.lo align/nexusil.lo align/phylipi.lo align/phylipiy.lo align/phylipil.lo align/phylips.lo align/phylipsy.lo align/phylipsl.lo align/stock.lo align/stocky.lo align/stockl.lo align/parse.lo align/phylip.lo +/bin/sh ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/build/squizz-0.99d+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -o libbioali.la -rpath /usr/lib/aarch64-linux-gnu align.lo align/clustal.lo align/clustaly.lo align/clustall.lo align/fasta2.lo align/mega.lo align/megay.lo align/megal.lo align/msf.lo align/msfy.lo align/msfl.lo align/nexusi.lo align/nexusiy.lo align/nexusil.lo align/phylipi.lo align/phylipiy.lo align/phylipil.lo align/phylips.lo align/phylipsy.lo align/phylipsl.lo align/stock.lo align/stocky.lo align/stockl.lo align/parse.lo align/phylip.lo libtool: link: gcc -shared -fPIC -DPIC .libs/align.o align/.libs/clustal.o align/.libs/clustaly.o align/.libs/clustall.o align/.libs/fasta2.o align/.libs/mega.o align/.libs/megay.o align/.libs/megal.o align/.libs/msf.o align/.libs/msfy.o align/.libs/msfl.o align/.libs/nexusi.o align/.libs/nexusiy.o align/.libs/nexusil.o align/.libs/phylipi.o align/.libs/phylipiy.o align/.libs/phylipil.o align/.libs/phylips.o align/.libs/phylipsy.o align/.libs/phylipsl.o align/.libs/stock.o align/.libs/stocky.o align/.libs/stockl.o align/.libs/parse.o align/.libs/phylip.o -g -O2 -fstack-protector-strong -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-soname -Wl,libbioali.so.0 -o .libs/libbioali.so.0.0.0 +/bin/sh ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/build/squizz-0.99d+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -o libbioseq.la -rpath /usr/lib/aarch64-linux-gnu sequence.lo sequence/embl.lo sequence/embly.lo sequence/embll.lo sequence/fasta.lo sequence/fastay.lo sequence/fastal.lo sequence/genbank.lo sequence/genbanky.lo sequence/genbankl.lo sequence/gcg.lo sequence/gcgy.lo sequence/gcgl.lo sequence/gde.lo sequence/gdey.lo sequence/gdel.lo sequence/ig.lo sequence/igy.lo sequence/igl.lo sequence/nbrf.lo sequence/nbrfy.lo sequence/nbrfl.lo sequence/codata.lo sequence/codatay.lo sequence/codatal.lo sequence/raw.lo sequence/rawy.lo sequence/rawl.lo sequence/sprot.lo sequence/sproty.lo sequence/sprotl.lo sequence/parse.lo sequence/protein.lo sequence/utils.lo extern/text.lo extern/file.lo libtool: link: (cd ".libs" && rm -f "libbioali.so.0" && ln -s "libbioali.so.0.0.0" "libbioali.so.0") libtool: link: (cd ".libs" && rm -f "libbioali.so" && ln -s "libbioali.so.0.0.0" "libbioali.so") libtool: link: ar cr .libs/libbioali.a align.o align/clustal.o align/clustaly.o align/clustall.o align/fasta2.o align/mega.o align/megay.o align/megal.o align/msf.o align/msfy.o align/msfl.o align/nexusi.o align/nexusiy.o align/nexusil.o align/phylipi.o align/phylipiy.o align/phylipil.o align/phylips.o align/phylipsy.o align/phylipsl.o align/stock.o align/stocky.o align/stockl.o align/parse.o align/phylip.o libtool: link: ranlib .libs/libbioali.a libtool: link: ( cd ".libs" && rm -f "libbioali.la" && ln -s "../libbioali.la" "libbioali.la" ) +libtool: link: gcc -shared -fPIC -DPIC .libs/sequence.o sequence/.libs/embl.o sequence/.libs/embly.o sequence/.libs/embll.o sequence/.libs/fasta.o sequence/.libs/fastay.o sequence/.libs/fastal.o sequence/.libs/genbank.o sequence/.libs/genbanky.o sequence/.libs/genbankl.o sequence/.libs/gcg.o sequence/.libs/gcgy.o sequence/.libs/gcgl.o sequence/.libs/gde.o sequence/.libs/gdey.o sequence/.libs/gdel.o sequence/.libs/ig.o sequence/.libs/igy.o sequence/.libs/igl.o sequence/.libs/nbrf.o sequence/.libs/nbrfy.o sequence/.libs/nbrfl.o sequence/.libs/codata.o sequence/.libs/codatay.o sequence/.libs/codatal.o sequence/.libs/raw.o sequence/.libs/rawy.o sequence/.libs/rawl.o sequence/.libs/sprot.o sequence/.libs/sproty.o sequence/.libs/sprotl.o sequence/.libs/parse.o sequence/.libs/protein.o sequence/.libs/utils.o extern/.libs/text.o extern/.libs/file.o -g -O2 -fstack-protector-strong -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-soname -Wl,libbioseq.so.0 -o .libs/libbioseq.so.0.0.0 +libtool: link: (cd ".libs" && rm -f "libbioseq.so.0" && ln -s "libbioseq.so.0.0.0" "libbioseq.so.0") +libtool: link: (cd ".libs" && rm -f "libbioseq.so" && ln -s "libbioseq.so.0.0.0" "libbioseq.so") +libtool: link: ar cr .libs/libbioseq.a sequence.o sequence/embl.o sequence/embly.o sequence/embll.o sequence/fasta.o sequence/fastay.o sequence/fastal.o sequence/genbank.o sequence/genbanky.o sequence/genbankl.o sequence/gcg.o sequence/gcgy.o sequence/gcgl.o sequence/gde.o sequence/gdey.o sequence/gdel.o sequence/ig.o sequence/igy.o sequence/igl.o sequence/nbrf.o sequence/nbrfy.o sequence/nbrfl.o sequence/codata.o sequence/codatay.o sequence/codatal.o sequence/raw.o sequence/rawy.o sequence/rawl.o sequence/sprot.o sequence/sproty.o sequence/sprotl.o sequence/parse.o sequence/protein.o sequence/utils.o extern/text.o extern/file.o +libtool: link: ranlib .libs/libbioseq.a +libtool: link: ( cd ".libs" && rm -f "libbioseq.la" && ln -s "../libbioseq.la" "libbioseq.la" ) make[3]: Leaving directory '/build/squizz-0.99d+dfsg/lib' make[2]: Leaving directory '/build/squizz-0.99d+dfsg/lib' Making all in src make[2]: Entering directory '/build/squizz-0.99d+dfsg/src' gcc -DHAVE_CONFIG_H -I. -I../lib -I./../lib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/squizz-0.99d+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o squizz.o squizz.c gcc -DHAVE_CONFIG_H -I. -I../lib -I./../lib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/squizz-0.99d+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o format.o format.c -/bin/bash ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/build/squizz-0.99d+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -o squizz squizz.o format.o ../lib/libbioali.la ../lib/libbioseq.la +/bin/sh ../libtool --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/build/squizz-0.99d+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -o squizz squizz.o format.o ../lib/libbioali.la ../lib/libbioseq.la libtool: link: gcc -g -O2 -fdebug-prefix-map=/build/squizz-0.99d+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/squizz squizz.o format.o ../lib/.libs/libbioali.so ../lib/.libs/libbioseq.so make[2]: Leaving directory '/build/squizz-0.99d+dfsg/src' Making all in data @@ -820,8 +891,8 @@ Making install in lib make[2]: Entering directory '/build/squizz-0.99d+dfsg/lib' make[3]: Entering directory '/build/squizz-0.99d+dfsg/lib' - /bin/mkdir -p '/build/squizz-0.99d+dfsg/debian/tmp/usr/lib/aarch64-linux-gnu' - /bin/bash ../libtool --mode=install /usr/bin/install -c libbioseq.la libbioali.la '/build/squizz-0.99d+dfsg/debian/tmp/usr/lib/aarch64-linux-gnu' + /usr/bin/mkdir -p '/build/squizz-0.99d+dfsg/debian/tmp/usr/lib/aarch64-linux-gnu' + /bin/sh ../libtool --mode=install /usr/bin/install -c libbioseq.la libbioali.la '/build/squizz-0.99d+dfsg/debian/tmp/usr/lib/aarch64-linux-gnu' libtool: install: /usr/bin/install -c .libs/libbioseq.so.0.0.0 /build/squizz-0.99d+dfsg/debian/tmp/usr/lib/aarch64-linux-gnu/libbioseq.so.0.0.0 libtool: install: (cd /build/squizz-0.99d+dfsg/debian/tmp/usr/lib/aarch64-linux-gnu && { ln -s -f libbioseq.so.0.0.0 libbioseq.so.0 || { rm -f libbioseq.so.0 && ln -s libbioseq.so.0.0.0 libbioseq.so.0; }; }) libtool: install: (cd /build/squizz-0.99d+dfsg/debian/tmp/usr/lib/aarch64-linux-gnu && { ln -s -f libbioseq.so.0.0.0 libbioseq.so || { rm -f libbioseq.so && ln -s libbioseq.so.0.0.0 libbioseq.so; }; }) @@ -837,10 +908,10 @@ libtool: install: chmod 644 /build/squizz-0.99d+dfsg/debian/tmp/usr/lib/aarch64-linux-gnu/libbioali.a libtool: install: ranlib /build/squizz-0.99d+dfsg/debian/tmp/usr/lib/aarch64-linux-gnu/libbioali.a libtool: warning: remember to run 'libtool --finish /usr/lib/aarch64-linux-gnu' - /bin/mkdir -p '/build/squizz-0.99d+dfsg/debian/tmp/usr/include/squizz' - /bin/mkdir -p '/build/squizz-0.99d+dfsg/debian/tmp/usr/include/squizz/align' + /usr/bin/mkdir -p '/build/squizz-0.99d+dfsg/debian/tmp/usr/include/squizz' + /usr/bin/mkdir -p '/build/squizz-0.99d+dfsg/debian/tmp/usr/include/squizz/align' /usr/bin/install -c -m 644 align/clustal.h align/fasta2.h align/mega.h align/msf.h align/nexusi.h align/phylipi.h align/phylips.h align/stock.h '/build/squizz-0.99d+dfsg/debian/tmp/usr/include/squizz/align' - /bin/mkdir -p '/build/squizz-0.99d+dfsg/debian/tmp/usr/include/squizz/sequence' + /usr/bin/mkdir -p '/build/squizz-0.99d+dfsg/debian/tmp/usr/include/squizz/sequence' /usr/bin/install -c -m 644 sequence/embl.h sequence/fasta.h sequence/genbank.h sequence/gcg.h sequence/gde.h sequence/ig.h sequence/nbrf.h sequence/codata.h sequence/raw.h sequence/sprot.h '/build/squizz-0.99d+dfsg/debian/tmp/usr/include/squizz/sequence' /usr/bin/install -c -m 644 sequence.h align.h '/build/squizz-0.99d+dfsg/debian/tmp/usr/include/squizz/.' make[3]: Leaving directory '/build/squizz-0.99d+dfsg/lib' @@ -848,8 +919,8 @@ Making install in src make[2]: Entering directory '/build/squizz-0.99d+dfsg/src' make[3]: Entering directory '/build/squizz-0.99d+dfsg/src' - /bin/mkdir -p '/build/squizz-0.99d+dfsg/debian/tmp/usr/bin' - /bin/bash ../libtool --mode=install /usr/bin/install -c squizz '/build/squizz-0.99d+dfsg/debian/tmp/usr/bin' + /usr/bin/mkdir -p '/build/squizz-0.99d+dfsg/debian/tmp/usr/bin' + /bin/sh ../libtool --mode=install /usr/bin/install -c squizz '/build/squizz-0.99d+dfsg/debian/tmp/usr/bin' libtool: warning: '../lib/libbioali.la' has not been installed in '/usr/lib/aarch64-linux-gnu' libtool: warning: '../lib/libbioseq.la' has not been installed in '/usr/lib/aarch64-linux-gnu' libtool: install: /usr/bin/install -c .libs/squizz /build/squizz-0.99d+dfsg/debian/tmp/usr/bin/squizz @@ -867,11 +938,11 @@ make[2]: Entering directory '/build/squizz-0.99d+dfsg/doc' make[3]: Entering directory '/build/squizz-0.99d+dfsg/doc' make[3]: Nothing to be done for 'install-exec-am'. - /bin/mkdir -p '/build/squizz-0.99d+dfsg/debian/tmp/usr/share/doc/squizz' + /usr/bin/mkdir -p '/build/squizz-0.99d+dfsg/debian/tmp/usr/share/doc/squizz' /usr/bin/install -c -m 644 seqfmt.html alifmt.html '/build/squizz-0.99d+dfsg/debian/tmp/usr/share/doc/squizz' - /bin/mkdir -p '/build/squizz-0.99d+dfsg/debian/tmp/usr/share/man/man1' + /usr/bin/mkdir -p '/build/squizz-0.99d+dfsg/debian/tmp/usr/share/man/man1' /usr/bin/install -c -m 644 'squizz.man' '/build/squizz-0.99d+dfsg/debian/tmp/usr/share/man/man1/squizz.1' - /bin/mkdir -p '/build/squizz-0.99d+dfsg/debian/tmp/usr/share/man/man5' + /usr/bin/mkdir -p '/build/squizz-0.99d+dfsg/debian/tmp/usr/share/man/man5' /usr/bin/install -c -m 644 'seqfmt.man' '/build/squizz-0.99d+dfsg/debian/tmp/usr/share/man/man5/seqfmt.5' /usr/bin/install -c -m 644 'alifmt.man' '/build/squizz-0.99d+dfsg/debian/tmp/usr/share/man/man5/alifmt.5' make[3]: Leaving directory '/build/squizz-0.99d+dfsg/doc' @@ -905,16 +976,16 @@ dh_strip -a dh_makeshlibs -a dh_shlibdeps -a -dpkg-shlibdeps: warning: symbol text_strupd used by debian/libsquizz/usr/lib/libbioali.so.0.0.0 found in none of the libraries -dpkg-shlibdeps: warning: symbol sequence_type used by debian/libsquizz/usr/lib/libbioali.so.0.0.0 found in none of the libraries -dpkg-shlibdeps: warning: symbol sequence_free used by debian/libsquizz/usr/lib/libbioali.so.0.0.0 found in none of the libraries dpkg-shlibdeps: warning: symbol gcg_crc used by debian/libsquizz/usr/lib/libbioali.so.0.0.0 found in none of the libraries dpkg-shlibdeps: warning: symbol sequence_new used by debian/libsquizz/usr/lib/libbioali.so.0.0.0 found in none of the libraries -dpkg-shlibdeps: warning: symbol parse_stradd used by debian/libsquizz/usr/lib/libbioali.so.0.0.0 found in none of the libraries +dpkg-shlibdeps: warning: symbol sequence_free used by debian/libsquizz/usr/lib/libbioali.so.0.0.0 found in none of the libraries +dpkg-shlibdeps: warning: symbol fasta_print used by debian/libsquizz/usr/lib/libbioali.so.0.0.0 found in none of the libraries +dpkg-shlibdeps: warning: symbol text_strupd used by debian/libsquizz/usr/lib/libbioali.so.0.0.0 found in none of the libraries dpkg-shlibdeps: warning: symbol fastay_check used by debian/libsquizz/usr/lib/libbioali.so.0.0.0 found in none of the libraries +dpkg-shlibdeps: warning: symbol xstrdup used by debian/libsquizz/usr/lib/libbioali.so.0.0.0 found in none of the libraries dpkg-shlibdeps: warning: symbol sequence_fixnam used by debian/libsquizz/usr/lib/libbioali.so.0.0.0 found in none of the libraries -dpkg-shlibdeps: warning: symbol fasta_print used by debian/libsquizz/usr/lib/libbioali.so.0.0.0 found in none of the libraries dpkg-shlibdeps: warning: symbol fastay_parse used by debian/libsquizz/usr/lib/libbioali.so.0.0.0 found in none of the libraries +dpkg-shlibdeps: warning: symbol parse_stradd used by debian/libsquizz/usr/lib/libbioali.so.0.0.0 found in none of the libraries dpkg-shlibdeps: warning: 1 similar warning has been skipped (use -v to see it) dh_installdeb dh_gencontrol @@ -923,9 +994,9 @@ dh_builddeb dpkg-deb: building package 'squizz' in '../squizz_0.99d+dfsg-3_arm64.deb'. dpkg-deb: building package 'squizz-dbgsym' in '../squizz-dbgsym_0.99d+dfsg-3_arm64.deb'. -dpkg-deb: building package 'libsquizz-dbgsym' in '../libsquizz-dbgsym_0.99d+dfsg-3_arm64.deb'. -dpkg-deb: building package 'libsquizz-dev' in '../libsquizz-dev_0.99d+dfsg-3_arm64.deb'. dpkg-deb: building package 'libsquizz' in '../libsquizz_0.99d+dfsg-3_arm64.deb'. +dpkg-deb: building package 'libsquizz-dev' in '../libsquizz-dev_0.99d+dfsg-3_arm64.deb'. +dpkg-deb: building package 'libsquizz-dbgsym' in '../libsquizz-dbgsym_0.99d+dfsg-3_arm64.deb'. dpkg-genbuildinfo --build=binary dpkg-genchanges --build=binary >../squizz_0.99d+dfsg-3_arm64.changes dpkg-genchanges: info: binary-only upload (no source code included) @@ -933,12 +1004,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/21940/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/21940/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/659 and its subdirectories -I: Current time: Tue Aug 30 18:16:21 -12 2022 -I: pbuilder-time-stamp: 1661926581 +I: removing directory /srv/workspace/pbuilder/21940 and its subdirectories +I: Current time: Thu Jul 29 13:56:35 +14 2021 +I: pbuilder-time-stamp: 1627516595