Diff of the two buildlogs: -- --- b1/build.log 2024-01-07 09:27:35.197015483 +0000 +++ b2/build.log 2024-01-07 10:06:11.074672068 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Sat Jan 6 20:53:18 -12 2024 -I: pbuilder-time-stamp: 1704617598 +I: Current time: Sun Feb 9 05:50:38 +14 2025 +I: pbuilder-time-stamp: 1739029838 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bullseye-reproducible-base.tgz] I: copying local configuration @@ -17,7 +17,7 @@ I: copying [./python-escript_5.6-3.debian.tar.xz] I: Extracting source gpgv: unknown type of key resource 'trustedkeys.kbx' -gpgv: keyblock resource '/tmp/dpkg-verify-sig.w2CJwQMu/trustedkeys.kbx': General error +gpgv: keyblock resource '/tmp/dpkg-verify-sig.Yl6yUqWb/trustedkeys.kbx': General error gpgv: Signature made Wed Apr 7 21:34:21 2021 gpgv: using RSA key 82383CE9165B347C787081A2CBE6BB4E5D9AD3A5 gpgv: Can't check signature: No public key @@ -40,49 +40,80 @@ dpkg-source: info: applying ignore-dflag.patch I: using fakeroot in build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/1199302/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/1465513/tmp/hooks/D01_modify_environment starting +debug: Running on codethink03-arm64. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Feb 8 15:50 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/1465513/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/1465513/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='arm64' - DEBIAN_FRONTEND='noninteractive' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:hostcomplete:interactive_comments:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="1" [2]="4" [3]="1" [4]="release" [5]="aarch64-unknown-linux-gnu") + BASH_VERSION='5.1.4(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=arm64 + DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all,-fixfilepath parallel=12 ' - DISTRIBUTION='bullseye' - HOME='/root' - HOST_ARCH='arm64' + DIRSTACK=() + DISTRIBUTION=bullseye + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=aarch64 + HOST_ARCH=arm64 IFS=' ' - INVOCATION_ID='841e9ec5393f41698e376d1e6077f0ab' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='1199302' - PS1='# ' - PS2='> ' + INVOCATION_ID=4a5bc1fb21924e8ba85a29eab08ffbb3 + LANG=C + LANGUAGE=nl_BE:nl + LC_ALL=C + MACHTYPE=aarch64-unknown-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=1465513 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.iNHxG4Qk/pbuilderrc_nbol --distribution bullseye --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bullseye-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.iNHxG4Qk/b1 --logfile b1/build.log python-escript_5.6-3.dsc' - SUDO_GID='109' - SUDO_UID='104' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://192.168.101.104:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.iNHxG4Qk/pbuilderrc_TJkO --distribution bullseye --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bullseye-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.iNHxG4Qk/b2 --logfile b2/build.log python-escript_5.6-3.dsc' + SUDO_GID=109 + SUDO_UID=104 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://192.168.101.104:3128 I: uname -a - Linux codethink02-arm64 6.1.0-17-cloud-arm64 #1 SMP Debian 6.1.69-1 (2023-12-30) aarch64 GNU/Linux + Linux i-capture-the-hostname 6.1.0-17-cloud-arm64 #1 SMP Debian 6.1.69-1 (2023-12-30) aarch64 GNU/Linux I: ls -l /bin total 5252 -rwxr-xr-x 1 root root 1282512 Mar 27 2022 bash @@ -142,7 +173,7 @@ -rwxr-xr-x 1 root root 43880 Sep 22 2020 rmdir -rwxr-xr-x 1 root root 19208 Sep 27 2020 run-parts -rwxr-xr-x 1 root root 114016 Dec 22 2018 sed - lrwxrwxrwx 1 root root 4 Dec 7 09:24 sh -> dash + lrwxrwxrwx 1 root root 9 Feb 8 15:50 sh -> /bin/bash -rwxr-xr-x 1 root root 35656 Sep 22 2020 sleep -rwxr-xr-x 1 root root 72640 Sep 22 2020 stty -rwsr-xr-x 1 root root 67776 Jan 20 2022 su @@ -168,7 +199,7 @@ -rwxr-xr-x 1 root root 2206 Apr 10 2022 zless -rwxr-xr-x 1 root root 1842 Apr 10 2022 zmore -rwxr-xr-x 1 root root 4577 Apr 10 2022 znew -I: user script /srv/workspace/pbuilder/1199302/tmp/hooks/D02_print_environment finished +I: user script /srv/workspace/pbuilder/1465513/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -629,7 +660,7 @@ Get: 357 http://deb.debian.org/debian bullseye/main arm64 texlive-pictures all 2020.20210202-3 [6743 kB] Get: 358 http://deb.debian.org/debian bullseye/main arm64 texlive-latex-extra all 2020.20210202-3 [13.7 MB] Get: 359 http://deb.debian.org/debian bullseye/main arm64 zip arm64 3.0-12 [228 kB] -Fetched 324 MB in 2s (189 MB/s) +Fetched 324 MB in 2s (213 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package bsdextrautils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 17734 files and directories currently installed.) @@ -1775,8 +1806,8 @@ Setting up tzdata (2021a-1+deb11u10) ... Current default time zone: 'Etc/UTC' -Local time is now: Sun Jan 7 08:54:14 UTC 2024. -Universal Time is now: Sun Jan 7 08:54:14 UTC 2024. +Local time is now: Sat Feb 8 15:51:35 UTC 2025. +Universal Time is now: Sat Feb 8 15:51:35 UTC 2025. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up libopenexr25:arm64 (2.5.4-2+deb11u1) ... @@ -2144,7 +2175,11 @@ fakeroot is already the newest version (1.25.3-1.1). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: Building the package -I: Running cd /build/reproducible-path/python-escript-5.6/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../python-escript_5.6-3_source.changes +I: user script /srv/workspace/pbuilder/1465513/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for bullseye +I: user script /srv/workspace/pbuilder/1465513/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/python-escript-5.6/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../python-escript_5.6-3_source.changes dpkg-buildpackage: info: source package python-escript dpkg-buildpackage: info: source version 5.6-3 dpkg-buildpackage: info: source distribution unstable @@ -2215,7 +2250,7 @@ [GCC 10.2.1 20210110] Building with the following additional flags from debian: [['cpp_flags', '-Wdate-time -D_FORTIFY_SOURCE=2'], ['cxx_extra', '-g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized'], ['ld_extra', '-Wl,-z,relro -Wl,-z,now']] Using options in debian/sid_options.py. -/bin/sh: 1: svnversion: not found +/bin/sh: line 1: svnversion: command not found Checking whether the C++ compiler works... yes Checking for C++ function gethostname()... yes Checking for C++ header file byteswap.h... yes @@ -2234,7 +2269,7 @@ Checking for C++ library umfpack... yes Checking for C++ library siloh5... yes Checking for C++ library boost_iostreams... yes -Matplotlib created a temporary config/cache directory at /tmp/matplotlib-z00p_h_n because the default path (/nonexistent/first-build/.config/matplotlib) is not a writable directory; it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing. +Matplotlib created a temporary config/cache directory at /tmp/matplotlib-pldbftby because the default path (/nonexistent/second-build/.config/matplotlib) is not a writable directory; it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing. Traceback (most recent call last): File "", line 1, in ImportError: cannot import name 'griddata' from 'matplotlib.mlab' (/usr/lib/python3/dist-packages/matplotlib/mlab.py) @@ -2250,12 +2285,12 @@ cd debian/tmp3/posix/doc/user && pdflatex -interaction=nonstopmode -recorder -interaction=nonstopmode \\newcommand{\\RepVersion}{-2\\xspace}\\input{user.tex} user.tex This is pdfTeX, Version 3.14159265-2.6-1.40.21 (TeX Live 2020/Debian) (preloaded format=pdflatex) restricted \write18 enabled. +cd debian/tmp3/posix/doc/install && pdflatex -interaction=nonstopmode -recorder -interaction=nonstopmode \\newcommand{\\RepVersion}{-2\\xspace}\\input{install.tex} install.tex entering extended mode LaTeX2e <2020-10-01> patch level 4 L3 programming layer <2021-01-09> xparse <2020-03-03> (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/user.te -xcd debian/tmp3/posix/doc/install && pdflatex -interaction=nonstopmode -recorder -interaction=nonstopmode \\newcommand{\\RepVersion}{-2\\xspace}\\input{install.tex} install.tex - +x (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/esysdoc .cls Document Class: esysdoc @@ -2277,163 +2312,192 @@ (/usr/share/texlive/texmf-dist/tex/latex/listings/lstmisc.sty) (/usr/share/texlive/texmf-dist/tex/latex/listings/listings.cfg)) (/usr/share/texlive/texmf-dist/tex/generic/iftex/ifpdf.sty) -(/usr/share/texlive/texmf-dist/tex/latex/base/makeidx.sty) -(/usr/share/texlive/texmf-dist/tex/latex/url/url.styentering extended mode +(/usr/share/texlive/texmf-dist/tex/latex/base/makeidx.sty)entering extended mode LaTeX2e <2020-10-01> patch level 4 -L3 programming layer <2021-01-09>) xparse <2020-03-03> +L3 programming layer <2021-01-09> xparse <2020-03-03> (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/inst all.tex +(/usr/share/texlive/texmf-dist/tex/latex/url/url.sty) +(/usr/share/texlive/texmf-dist/tex/latex/tools/xspace.sty) (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/esys doc.cls -(/usr/share/texlive/texmf-dist/tex/latex/tools/xspace.sty) +(/usr/share/texlive/texmf-dist/tex/latex/graphics/graphicx.sty Document Class: esysdoc (/usr/share/texlive/texmf-dist/tex/latex/base/book.cls Document Class: book 2020/04/10 v1.4m Standard LaTeX document class -(/usr/share/texlive/texmf-dist/tex/latex/base/bk10.clo)) -(/usr/share/texlive/texmf-dist/tex/latex/graphics/graphicx.sty -(/usr/share/texlive/texmf-dist/tex/latex/geometry/geometry.sty +(/usr/share/texlive/texmf-dist/tex/latex/base/bk10.clo) +(/usr/share/texlive/texmf-dist/tex/latex/graphics/graphics.sty) +(/usr/share/texlive/texmf-dist/tex/latex/graphics/trig.sty) +(/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/graphics.cfg) +(/usr/share/texlive/texmf-dist/tex/latex/graphics-def/pdftex.def +(/usr/share/texlive/texmf-dist/tex/latex/geometry/geometry.sty))) (/usr/share/texlive/texmf-dist/tex/latex/graphics/keyval.sty) +(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsmath.sty (/usr/share/texlive/texmf-dist/tex/generic/iftex/ifvtex.sty -(/usr/share/texlive/texmf-dist/tex/latex/graphics/graphics.sty -(/usr/share/texlive/texmf-dist/tex/generic/iftex/iftex.sty)) +For additional information on amsmath, use the `?' option. +(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amstext.sty +(/usr/share/texlive/texmf-dist/tex/generic/iftex/iftex.sty +(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsgen.sty)))) Package geometry Warning: Over-specification in `h'-direction. `width' (478.00812pt) is ignored. ) -(/usr/share/texlive/texmf-dist/tex/latex/graphics/trig.sty) (/usr/share/texlive/texmf-dist/tex/latex/psnfss/times.sty) -(/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/graphics.cfg) -(/usr/share/texlive/texmf-dist/tex/latex/listings/listings.sty -(/usr/share/texlive/texmf-dist/tex/latex/graphics-def/pdftex.def))) +(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsbsy.sty) (/usr/share/texlive/texmf-dist/tex/latex/psnfss/times.sty) +(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsopn.sty) +(/usr/share/texlive/texmf-dist/tex/latex/listings/listings.sty) +(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amsfonts.sty) (/usr/share/texlive/texmf-dist/tex/latex/listings/lstmisc.sty) -(/usr/share/texlive/texmf-dist/tex/latex/listings/listings.cfg) -(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsmath.sty) +(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amssymb.sty +(/usr/share/texlive/texmf-dist/tex/latex/listings/listings.cfg))) (/usr/share/texlive/texmf-dist/tex/generic/iftex/ifpdf.sty) -For additional information on amsmath, use the `?' option. -(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amstext.sty +(/usr/share/texlive/texmf-dist/tex/latex/underscore/underscore.sty) (/usr/share/texlive/texmf-dist/tex/latex/base/makeidx.sty) (/usr/share/texlive/texmf-dist/tex/latex/url/url.sty) -(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsgen.sty)) +(/usr/share/texlive/texmf-dist/tex/latex/hyperref/hyperref.sty (/usr/share/texlive/texmf-dist/tex/latex/tools/xspace.sty) -(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsbsy.sty) +(/usr/share/texlive/texmf-dist/tex/generic/ltxcmds/ltxcmds.sty) (/usr/share/texlive/texmf-dist/tex/latex/graphics/graphicx.sty -(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsopn.sty -(/usr/share/texlive/texmf-dist/tex/latex/graphics/graphics.sty) -(/usr/share/texlive/texmf-dist/tex/latex/graphics/trig.sty) -(/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/graphics.cfg)) -(/usr/share/texlive/texmf-dist/tex/latex/graphics-def/pdftex.def))) -(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amsfonts.sty) -(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsmath.sty -(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amssymb.sty -For additional information on amsmath, use the `?' option. -(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amstext.sty) -(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsgen.sty)) -(/usr/share/texlive/texmf-dist/tex/latex/underscore/underscore.sty -(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsbsy.sty)) -(/usr/share/texlive/texmf-dist/tex/latex/hyperref/hyperref.sty -(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsopn.sty) -(/usr/share/texlive/texmf-dist/tex/generic/ltxcmds/ltxcmds.sty)) (/usr/share/texlive/texmf-dist/tex/generic/pdftexcmds/pdftexcmds.sty -(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amsfonts.sty) +(/usr/share/texlive/texmf-dist/tex/latex/graphics/graphics.sty (/usr/share/texlive/texmf-dist/tex/generic/infwarerr/infwarerr.sty) -(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amssymb.sty)) +(/usr/share/texlive/texmf-dist/tex/latex/graphics/trig.sty)) +(/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/graphics.cfg) +(/usr/share/texlive/texmf-dist/tex/latex/graphics-def/pdftex.def))) (/usr/share/texlive/texmf-dist/tex/generic/kvsetkeys/kvsetkeys.sty) -(/usr/share/texlive/texmf-dist/tex/latex/underscore/underscore.sty) +(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsmath.sty (/usr/share/texlive/texmf-dist/tex/generic/kvdefinekeys/kvdefinekeys.sty) -(/usr/share/texlive/texmf-dist/tex/latex/hyperref/hyperref.sty +For additional information on amsmath, use the `?' option. +(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amstext.sty (/usr/share/texlive/texmf-dist/tex/generic/pdfescape/pdfescape.sty -(/usr/share/texlive/texmf-dist/tex/generic/ltxcmds/ltxcmds.sty)) -(/usr/share/texlive/texmf-dist/tex/generic/pdftexcmds/pdftexcmds.sty -(/usr/share/texlive/texmf-dist/tex/latex/hycolor/hycolor.sty)cd debian/tmp3/posix/doc/cookbook && pdflatex -interaction=nonstopmode -recorder -interaction=nonstopmode \\newcommand{\\RepVersion}{-2\\xspace}\\input{cookbook.tex} cookbook.tex - -(/usr/share/texlive/texmf-dist/tex/generic/infwarerr/infwarerr.sty) +(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsgen.sty))) +(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsbsy.sty +(/usr/share/texlive/texmf-dist/tex/latex/hycolor/hycolor.sty)) +(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsopn.sty) (/usr/share/texlive/texmf-dist/tex/latex/letltxmacro/letltxmacro.sty)) (/usr/share/texlive/texmf-dist/tex/latex/auxhook/auxhook.sty) -(/usr/share/texlive/texmf-dist/tex/generic/kvsetkeys/kvsetkeys.sty) +(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amsfonts.sty) (/usr/share/texlive/texmf-dist/tex/latex/kvoptions/kvoptions.sty) +(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amssymb.sty +(/usr/share/texlive/texmf-dist/tex/latex/hyperref/pd1enc.def)) +(/usr/share/texlive/texmf-dist/tex/generic/intcalc/intcalc.sty) +(/usr/share/texlive/texmf-dist/tex/latex/underscore/underscore.sty) +(/usr/share/texlive/texmf-dist/tex/generic/etexcmds/etexcmds.sty +(/usr/share/texlive/texmf-dist/tex/latex/hyperref/hyperref.sty) +(/usr/share/texlive/texmf-dist/tex/generic/ltxcmds/ltxcmds.sty) +(/usr/share/texlive/texmf-dist/tex/generic/pdftexcmds/pdftexcmds.sty +(/usr/share/texlive/texmf-dist/tex/generic/bitset/bitset.sty +(/usr/share/texlive/texmf-dist/tex/generic/infwarerr/infwarerr.sty)) +(/usr/share/texlive/texmf-dist/tex/generic/bigintcalc/bigintcalc.sty)) +(/usr/share/texlive/texmf-dist/tex/generic/kvsetkeys/kvsetkeys.sty) (/usr/share/texlive/texmf-dist/tex/generic/kvdefinekeys/kvdefinekeys.sty) -(/usr/share/texlive/texmf-dist/tex/latex/hyperref/pd1enc.def) -(/usr/share/texlive/texmf-dist/tex/generic/pdfescape/pdfescape.sty) -(/usr/share/texlive/texmf-dist/tex/generic/intcalc/intcalc.sty)This is pdfTeX, Version 3.14159265-2.6-1.40.21 (TeX Live 2020/Debian) (preloaded format=pdflatex) - restricted \write18 enabled. +(/usr/share/texlive/texmf-dist/tex/latex/base/atbegshi-ltx.sty)cd debian/tmp3/posix/doc/cookbook && pdflatex -interaction=nonstopmode -recorder -interaction=nonstopmode \\newcommand{\\RepVersion}{-2\\xspace}\\input{cookbook.tex} cookbook.tex +(/usr/share/texlive/texmf-dist/tex/generic/pdfescape/pdfescape.sty) +(/usr/share/texlive/texmf-dist/tex/latex/hyperref/hpdftex.def) (/usr/share/texlive/texmf-dist/tex/latex/hycolor/hycolor.sty) -(/usr/share/texlive/texmf-dist/tex/generic/etexcmds/etexcmds.sty) +(/usr/share/texlive/texmf-dist/tex/latex/base/atveryend-ltx.sty) (/usr/share/texlive/texmf-dist/tex/latex/letltxmacro/letltxmacro.sty) -(/usr/share/texlive/texmf-dist/tex/latex/auxhook/auxhook.sty) -(/usr/share/texlive/texmf-dist/tex/generic/bitset/bitset.sty +(/usr/share/texlive/texmf-dist/tex/latex/rerunfilecheck/rerunfilecheck.sty +(/usr/share/texlive/texmf-dist/tex/latex/auxhook/auxhook.sty)This is pdfTeX, Version 3.14159265-2.6-1.40.21 (TeX Live 2020/Debian) (preloaded format=pdflatex) + restricted \write18 enabled. + (/usr/share/texlive/texmf-dist/tex/latex/kvoptions/kvoptions.sty) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/pd1enc.def -(/usr/share/texlive/texmf-dist/tex/generic/bigintcalc/bigintcalc.sty)cd /build/reproducible-path/python-escript-5.6/doc && tar -cf /build/reproducible-path/python-escript-5.6/debian/stage3/release/doc/escript_examples.tar examples/usersguide/lid_driven_cavity.py examples/usersguide/mount.py examples/usersguide/heatedblock.py examples/usersguide/helmholtz.py examples/usersguide/fluid.py examples/usersguide/poisson.py examples/usersguide/diffusion.py examples/usersguide/poisson_vtk.py examples/usersguide/darcy.py examples/usersguide/dirac.py examples/usersguide/slip.py examples/usersguide/int_save.py examples/usersguide/wave.py examples/usersguide/voxet_reader.py examples/geotutorial/steadystate_variablek.py examples/geotutorial/steadystate.py examples/geotutorial/forward_euler.py examples/geotutorial/myfirstscript.py examples/geotutorial/backward_euler.py examples/cookbook/example01a.py examples/cookbook/example01b.py examples/cookbook/example03b.py examples/inversion/create_netcdf.py examples/inversion/grav_ermapper.py examples/inversion/grav_netcdf.py examples/inversion/gravmag_netcdf.py examples/inversion/gravmag_nodriver.py examples/inversion/mag_netcdf.py examples/inversion/test_commemi1.py examples/inversion/test_commemi4.py examples/usersguide/trapezoid.py examples/usersguide/quad.py examples/usersguide/brick.py examples/usersguide/refine.py examples/usersguide/poisson_matplotlib.py examples/cookbook/example01c.py examples/cookbook/example02.py examples/cookbook/example03a.py examples/cookbook/example04a.py examples/cookbook/example04b.py examples/cookbook/example05a.py examples/cookbook/example05b.py examples/cookbook/example05c.py examples/cookbook/example06.py examples/cookbook/example07a.py examples/cookbook/example07b.py examples/cookbook/example08a.py examples/cookbook/example08b.py examples/cookbook/example08c.py examples/cookbook/example09m.py examples/cookbook/example09a.py examples/cookbook/example10a.py examples/cookbook/example10b.py examples/cookbook/example10m.py examples/cookbook/example11a.py examples/cookbook/example11b.py examples/inversion/plot_ermapper.py examples/inversion/plot_netcdf.py examples/inversion/dc_forward.py examples/cookbook/cblib.py examples/inversion/content.txt examples/inversion/data/GravitySmall examples/inversion/data/MagneticSmall examples/inversion/data/QLDWestGravity examples/inversion/data/QLDWestMagnetic examples/inversion/data/GravitySmall.ers examples/inversion/data/MagneticSmall.ers examples/inversion/data/QLDWestGravity.ers examples/inversion/data/QLDWestMagnetic.ers examples/inversion/data/GravitySmall.nc examples/inversion/data/MagneticSmall.nc examples/inversion/data/QLDWestGravity.nc examples/inversion/data/QLDWestMagnetic.nc examples/inversion/data/HalfSphere_v1.4.msh +(/usr/share/texlive/texmf-dist/tex/generic/uniquecounter/uniquecounter.sty)))) +(/usr/share/texlive/texmf-dist/tex/generic/intcalc/intcalc.sty) +(/usr/share/texlive/texmf-dist/tex/latex/oberdiek/hypcap.sty) +(/usr/share/texlive/texmf-dist/tex/generic/etexcmds/etexcmds.sty) +(/usr/share/texlive/texmf-dist/tex/latex/fancyhdr/fancyhdr.sty) +(/usr/share/texlive/texmf-dist/tex/latex/fncychap/fncychap.sty)) +(/usr/share/texlive/texmf-dist/tex/generic/bitset/bitset.sty +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/user_de +fs.texcd /build/reproducible-path/python-escript-5.6/doc && tar -cf /build/reproducible-path/python-escript-5.6/debian/stage3/release/doc/escript_examples.tar examples/usersguide/lid_driven_cavity.py examples/usersguide/mount.py examples/usersguide/heatedblock.py examples/usersguide/helmholtz.py examples/usersguide/fluid.py examples/usersguide/poisson.py examples/usersguide/diffusion.py examples/usersguide/poisson_vtk.py examples/usersguide/darcy.py examples/usersguide/dirac.py examples/usersguide/slip.py examples/usersguide/int_save.py examples/usersguide/wave.py examples/usersguide/voxet_reader.py examples/geotutorial/steadystate_variablek.py examples/geotutorial/steadystate.py examples/geotutorial/forward_euler.py examples/geotutorial/myfirstscript.py examples/geotutorial/backward_euler.py examples/cookbook/example01a.py examples/cookbook/example01b.py examples/cookbook/example03b.py examples/inversion/create_netcdf.py examples/inversion/grav_ermapper.py examples/inversion/grav_netcdf.py examples/inversion/gravmag_netcdf.py examples/inversion/gravmag_nodriver.py examples/inversion/mag_netcdf.py examples/inversion/test_commemi1.py examples/inversion/test_commemi4.py examples/usersguide/trapezoid.py examples/usersguide/quad.py examples/usersguide/brick.py examples/usersguide/refine.py examples/usersguide/poisson_matplotlib.py examples/cookbook/example01c.py examples/cookbook/example02.py examples/cookbook/example03a.py examples/cookbook/example04a.py examples/cookbook/example04b.py examples/cookbook/example05a.py examples/cookbook/example05b.py examples/cookbook/example05c.py examples/cookbook/example06.py examples/cookbook/example07a.py examples/cookbook/example07b.py examples/cookbook/example08a.py examples/cookbook/example08b.py examples/cookbook/example08c.py examples/cookbook/example09m.py examples/cookbook/example09a.py examples/cookbook/example10a.py examples/cookbook/example10b.py examples/cookbook/example10m.py examples/cookbook/example11a.py examples/cookbook/example11b.py examples/inversion/plot_ermapper.py examples/inversion/plot_netcdf.py examples/inversion/dc_forward.py examples/cookbook/cblib.py examples/inversion/content.txt examples/inversion/data/GravitySmall examples/inversion/data/MagneticSmall examples/inversion/data/QLDWestGravity examples/inversion/data/QLDWestMagnetic examples/inversion/data/GravitySmall.ers examples/inversion/data/MagneticSmall.ers examples/inversion/data/QLDWestGravity.ers examples/inversion/data/QLDWestMagnetic.ers examples/inversion/data/GravitySmall.nc examples/inversion/data/MagneticSmall.nc examples/inversion/data/QLDWestGravity.nc examples/inversion/data/QLDWestMagnetic.nc examples/inversion/data/HalfSphere_v1.4.msh + (/usr/share/texlive/texmf-dist/tex/latex/subfigure/subfigure.sty +(/usr/share/texlive/texmf-dist/tex/generic/bigintcalc/bigintcalc.sty +**************************************** +* Local config file subfigure.cfg used * +**************************************** +(/usr/share/texlive/texmf-dist/tex/latex/subfigure/subfigure.cfg))cd /build/reproducible-path/python-escript-5.6/doc && zip /build/reproducible-path/python-escript-5.6/debian/stage3/release/doc/escript_examples.zip examples/usersguide/lid_driven_cavity.py examples/usersguide/mount.py examples/usersguide/heatedblock.py examples/usersguide/helmholtz.py examples/usersguide/fluid.py examples/usersguide/poisson.py examples/usersguide/diffusion.py examples/usersguide/poisson_vtk.py examples/usersguide/darcy.py examples/usersguide/dirac.py examples/usersguide/slip.py examples/usersguide/int_save.py examples/usersguide/wave.py examples/usersguide/voxet_reader.py examples/geotutorial/steadystate_variablek.py examples/geotutorial/steadystate.py examples/geotutorial/forward_euler.py examples/geotutorial/myfirstscript.py examples/geotutorial/backward_euler.py examples/cookbook/example01a.py examples/cookbook/example01b.py examples/cookbook/example03b.py examples/inversion/create_netcdf.py examples/inversion/grav_ermapper.py examples/inversion/grav_netcdf.py examples/inversion/gravmag_netcdf.py examples/inversion/gravmag_nodriver.py examples/inversion/mag_netcdf.py examples/inversion/test_commemi1.py examples/inversion/test_commemi4.py examples/usersguide/trapezoid.py examples/usersguide/quad.py examples/usersguide/brick.py examples/usersguide/refine.py examples/usersguide/poisson_matplotlib.py examples/cookbook/example01c.py examples/cookbook/example02.py examples/cookbook/example03a.py examples/cookbook/example04a.py examples/cookbook/example04b.py examples/cookbook/example05a.py examples/cookbook/example05b.py examples/cookbook/example05c.py examples/cookbook/example06.py examples/cookbook/example07a.py examples/cookbook/example07b.py examples/cookbook/example08a.py examples/cookbook/example08b.py examples/cookbook/example08c.py examples/cookbook/example09m.py examples/cookbook/example09a.py examples/cookbook/example10a.py examples/cookbook/example10b.py examples/cookbook/example10m.py examples/cookbook/example11a.py examples/cookbook/example11b.py examples/inversion/plot_ermapper.py examples/inversion/plot_netcdf.py examples/inversion/dc_forward.py examples/cookbook/cblib.py examples/inversion/content.txt examples/inversion/data/GravitySmall examples/inversion/data/MagneticSmall examples/inversion/data/QLDWestGravity examples/inversion/data/QLDWestMagnetic examples/inversion/data/GravitySmall.ers examples/inversion/data/MagneticSmall.ers examples/inversion/data/QLDWestGravity.ers examples/inversion/data/QLDWestMagnetic.ers examples/inversion/data/GravitySmall.nc examples/inversion/data/MagneticSmall.nc examples/inversion/data/QLDWestGravity.nc examples/inversion/data/QLDWestMagnetic.nc examples/inversion/data/HalfSphere_v1.4.msh )) -(/usr/share/texlive/texmf-dist/tex/generic/intcalc/intcalc.sty)cd /build/reproducible-path/python-escript-5.6/doc && zip /build/reproducible-path/python-escript-5.6/debian/stage3/release/doc/escript_examples.zip examples/usersguide/lid_driven_cavity.py examples/usersguide/mount.py examples/usersguide/heatedblock.py examples/usersguide/helmholtz.py examples/usersguide/fluid.py examples/usersguide/poisson.py examples/usersguide/diffusion.py examples/usersguide/poisson_vtk.py examples/usersguide/darcy.py examples/usersguide/dirac.py examples/usersguide/slip.py examples/usersguide/int_save.py examples/usersguide/wave.py examples/usersguide/voxet_reader.py examples/geotutorial/steadystate_variablek.py examples/geotutorial/steadystate.py examples/geotutorial/forward_euler.py examples/geotutorial/myfirstscript.py examples/geotutorial/backward_euler.py examples/cookbook/example01a.py examples/cookbook/example01b.py examples/cookbook/example03b.py examples/inversion/create_netcdf.py examples/inversion/grav_ermapper.py examples/inversion/grav_netcdf.py examples/inversion/gravmag_netcdf.py examples/inversion/gravmag_nodriver.py examples/inversion/mag_netcdf.py examples/inversion/test_commemi1.py examples/inversion/test_commemi4.py examples/usersguide/trapezoid.py examples/usersguide/quad.py examples/usersguide/brick.py examples/usersguide/refine.py examples/usersguide/poisson_matplotlib.py examples/cookbook/example01c.py examples/cookbook/example02.py examples/cookbook/example03a.py examples/cookbook/example04a.py examples/cookbook/example04b.py examples/cookbook/example05a.py examples/cookbook/example05b.py examples/cookbook/example05c.py examples/cookbook/example06.py examples/cookbook/example07a.py examples/cookbook/example07b.py examples/cookbook/example08a.py examples/cookbook/example08b.py examples/cookbook/example08c.py examples/cookbook/example09m.py examples/cookbook/example09a.py examples/cookbook/example10a.py examples/cookbook/example10b.py examples/cookbook/example10m.py examples/cookbook/example11a.py examples/cookbook/example11b.py examples/inversion/plot_ermapper.py examples/inversion/plot_netcdf.py examples/inversion/dc_forward.py examples/cookbook/cblib.py examples/inversion/content.txt examples/inversion/data/GravitySmall examples/inversion/data/MagneticSmall examples/inversion/data/QLDWestGravity examples/inversion/data/QLDWestMagnetic examples/inversion/data/GravitySmall.ers examples/inversion/data/MagneticSmall.ers examples/inversion/data/QLDWestGravity.ers examples/inversion/data/QLDWestMagnetic.ers examples/inversion/data/GravitySmall.nc examples/inversion/data/MagneticSmall.nc examples/inversion/data/QLDWestGravity.nc examples/inversion/data/QLDWestMagnetic.nc examples/inversion/data/HalfSphere_v1.4.msh +(/usr/share/texlive/texmf-dist/tex/latex/graphics/color.styMkdir("/build/reproducible-path/python-escript-5.6/debian/stage3/release/doc/doxygen") -(/usr/share/texlive/texmf-dist/tex/latex/base/atbegshi-ltx.sty) -(/usr/share/texlive/texmf-dist/tex/generic/etexcmds/etexcmds.sty)) -(/usr/share/texlive/texmf-dist/tex/latex/hyperref/hpdftex.defcd debian/tmp3/posix/doc/inversion && pdflatex -interaction=nonstopmode -recorder -interaction=nonstopmode \\newcommand{\\RepVersion}{-2\\xspace}\\input{inversion.tex} inversion.tex - adding: examples/usersguide/lid_driven_cavity.py (deflated 55%) - adding: examples/usersguide/mount.py (deflated 60%) - adding: examples/usersguide/heatedblock.py (deflated 58%) +(/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/color.cfg)entering extended mode +LaTeX2e <2020-10-01> patch level 4 +L3 programming layer <2021-01-09> xparse <2020-03-03>) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/coo +kbook.tex +(/usr/share/texlive/texmf-dist/tex/latex/base/atbegshi-ltx.sty) adding: examples/usersguide/lid_driven_cavity.py (deflated 55%) + adding: examples/usersguide/mount.py +(/usr/share/texlive/texmf-dist/tex/latex/ccaption/ccaption.sty (deflated 60%) + adding: examples/usersguide/heatedblock.py) (deflated 58%) adding: examples/usersguide/helmholtz.py (deflated 56%) adding: examples/usersguide/fluid.py (deflated 56%) adding: examples/usersguide/poisson.py (deflated 56%) - adding: examples/usersguide/diffusion.py (deflated 56%) - adding: examples/usersguide/poisson_vtk.py (deflated 56%) - adding: examples/usersguide/darcy.py (deflated 57%) + adding: examples/usersguide/diffusion.pyMkdir("/build/reproducible-path/python-escript-5.6/debian/stage3/release/doc/sphinx_api") + (deflated 56%) + adding: examples/usersguide/poisson_vtk.py +(/usr/share/texlive/texmf-dist/tex/latex/hyperref/hpdftex.def (deflated 56%) + adding: examples/usersguide/darcy.pyMkdir("/build/reproducible-path/python-escript-5.6/debian/tmp3/sphinx_int") + (deflated 57%) adding: examples/usersguide/dirac.py (deflated 57%) - adding: examples/usersguide/slip.py (deflated 57%) + adding: examples/usersguide/slip.py +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/esy +sdoc.cls) (deflated 57%) adding: examples/usersguide/int_save.py (deflated 56%) adding: examples/usersguide/wave.py (deflated 60%) adding: examples/usersguide/voxet_reader.py (deflated 67%) adding: examples/geotutorial/steadystate_variablek.py (deflated 55%) - adding: examples/geotutorial/steadystate.pyMkdir("/build/reproducible-path/python-escript-5.6/debian/stage3/release/doc/doxygen") - (deflated 55%) + adding: examples/geotutorial/steadystate.py (deflated 55%) + adding: examples/geotutorial/forward_euler.py +\@input{elist.aux} -(/usr/share/texlive/texmf-dist/tex/latex/base/atveryend-ltx.sty adding: examples/geotutorial/forward_euler.py) (deflated 56%) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/elist.t +ex (deflated 56%) adding: examples/geotutorial/myfirstscript.py (deflated 55%) adding: examples/geotutorial/backward_euler.py (deflated 56%) adding: examples/cookbook/example01a.py (deflated 57%) - adding: examples/cookbook/example01b.py -(/usr/share/texlive/texmf-dist/tex/generic/bitset/bitset.sty (deflated 57%) + adding: examples/cookbook/example01b.py (deflated 57%) adding: examples/cookbook/example03b.py (deflated 58%) adding: examples/inversion/create_netcdf.py (deflated 60%) adding: examples/inversion/grav_ermapper.py (deflated 57%) adding: examples/inversion/grav_netcdf.py (deflated 58%) - adding: examples/inversion/gravmag_netcdf.py (deflated 61%) - adding: examples/inversion/gravmag_nodriver.py (deflated 60%) + adding: examples/inversion/gravmag_netcdf.pyTouch("debian/stage3/esys/__init__.py") + (deflated 61%) + adding: examples/inversion/gravmag_nodriver.pycd debian/tmp3/posix/doc/inversion && pdflatex -interaction=nonstopmode -recorder -interaction=nonstopmode \\newcommand{\\RepVersion}{-2\\xspace}\\input{inversion.tex} inversion.tex + (deflated 60%) adding: examples/inversion/mag_netcdf.py (deflated 59%) - adding: examples/inversion/test_commemi1.pyMkdir("/build/reproducible-path/python-escript-5.6/debian/stage3/release/doc/sphinx_api") - (deflated 73%) - adding: examples/inversion/test_commemi4.py (deflated 75%) - adding: examples/usersguide/trapezoid.pyMkdir("/build/reproducible-path/python-escript-5.6/debian/tmp3/sphinx_int") - (deflated 57%) + adding: examples/inversion/test_commemi1.py +Document Class: esysdoc +(/usr/share/texlive/texmf-dist/tex/latex/base/book.cls (deflated 73%) + adding: examples/inversion/test_commemi4.py (/usr/share/texlive/texmf-dist/tex/latex/listing/listing.sty +(/usr/share/texlive/texmf-dist/tex/latex/base/atveryend-ltx.sty +Package `listing', V1.2, <1999/05/25> +)) (deflated 75%) + adding: examples/usersguide/trapezoid.py +Document Class: book 2020/04/10 v1.4m Standard LaTeX document class +(/usr/share/texlive/texmf-dist/tex/latex/base/bk10.clo) (deflated 57%) adding: examples/usersguide/quad.py (deflated 56%) - adding: examples/usersguide/brick.py (deflated 59%) + adding: examples/usersguide/brick.py)) (deflated 59%) adding: examples/usersguide/refine.py (deflated 56%) adding: examples/usersguide/poisson_matplotlib.py (deflated 59%) - adding: examples/cookbook/example01c.py -(/usr/share/texlive/texmf-dist/tex/latex/rerunfilecheck/rerunfilecheck.sty (deflated 58%) + adding: examples/cookbook/example01c.py (deflated 58%) adding: examples/cookbook/example02.py (deflated 58%) - -(/usr/share/texlive/texmf-dist/tex/generic/bigintcalc/bigintcalc.sty adding: examples/cookbook/example03a.py (deflated 58%) - adding: examples/cookbook/example04a.pyentering extended mode -LaTeX2e <2020-10-01> patch level 4 -L3 programming layer <2021-01-09>Touch("debian/stage3/esys/__init__.py") - (deflated 60%) - adding: examples/cookbook/example04b.py xparse <2020-03-03> (deflated 59%) + adding: examples/cookbook/example03a.py (deflated 58%) + adding: examples/cookbook/example04a.py (deflated 60%) + adding: examples/cookbook/example04b.py (deflated 59%) adding: examples/cookbook/example05a.py (deflated 60%) -) adding: examples/cookbook/example05b.py (deflated 63%) - adding: examples/cookbook/example05c.py) (deflated 60%) - adding: examples/cookbook/example06.py -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/coo -kbook.tex (deflated 62%) + adding: examples/cookbook/example05b.py) (deflated 63%) + adding: examples/cookbook/example05c.py (deflated 60%) + adding: examples/cookbook/example06.py (deflated 62%) adding: examples/cookbook/example07a.py (deflated 60%) adding: examples/cookbook/example07b.py (deflated 60%) - adding: examples/cookbook/example08a.py (deflated 60%) + adding: examples/cookbook/example08a.py (/usr/share/texlive/texmf-dist/tex/latex/upquote/upquote.sty (deflated 60%) adding: examples/cookbook/example08b.py (deflated 62%) adding: examples/cookbook/example08c.py (deflated 62%) adding: examples/cookbook/example09m.py (deflated 66%) - adding: examples/cookbook/example09a.py (deflated 61%) + adding: examples/cookbook/example09a.py +(/usr/share/texlive/texmf-dist/tex/latex/rerunfilecheck/rerunfilecheck.sty (deflated 61%) adding: examples/cookbook/example10a.py (deflated 58%) adding: examples/cookbook/example10b.py (deflated 58%) adding: examples/cookbook/example10m.py (deflated 62%) @@ -2441,230 +2505,219 @@ adding: examples/cookbook/example11b.py (deflated 59%) adding: examples/inversion/plot_ermapper.py (deflated 60%) adding: examples/inversion/plot_netcdf.py (deflated 56%) - adding: examples/inversion/dc_forward.py (deflated 63%) + adding: examples/inversion/dc_forward.py +(/usr/share/texlive/texmf-dist/tex/latex/geometry/geometry.sty +(/usr/share/texlive/texmf-dist/tex/latex/base/textcomp.sty (deflated 63%) adding: examples/cookbook/cblib.py (deflated 58%) - adding: examples/inversion/content.txt -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/esy -sdoc.cls (deflated 77%) + adding: examples/inversion/content.txt (deflated 77%) adding: examples/inversion/data/GravitySmall (deflated 3%) adding: examples/inversion/data/MagneticSmall (deflated 1%) - adding: examples/inversion/data/QLDWestGravity -(/usr/share/texlive/texmf-dist/tex/generic/uniquecounter/uniquecounter.sty -(/usr/share/texlive/texmf-dist/tex/latex/base/atbegshi-ltx.sty))))) -Document Class: esysdoc -(/usr/share/texlive/texmf-dist/tex/latex/base/book.cls -(/usr/share/texlive/texmf-dist/tex/latex/hyperref/hpdftex.def (deflated 11%) - adding: examples/inversion/data/QLDWestMagnetic -Document Class: book 2020/04/10 v1.4m Standard LaTeX document class -(/usr/share/texlive/texmf-dist/tex/latex/base/bk10.clo/usr/bin/python3 scripts/py_comp.py downunder/py_src/__init__.py debian/tmp3/posix/downunder/__init__.pyc -) -(/usr/share/texlive/texmf-dist/tex/latex/oberdiek/hypcap.sty)) (deflated 7%) + adding: examples/inversion/data/QLDWestGravity)) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/verinfo +.tex) +(/usr/share/texlive/texmf-dist/tex/latex/graphics/keyval.sty (deflated 11%) + adding: examples/inversion/data/QLDWestMagnetic) (deflated 7%) adding: examples/inversion/data/GravitySmall.ers (deflated 49%) adding: examples/inversion/data/MagneticSmall.ers (deflated 49%) - adding: examples/inversion/data/QLDWestGravity.ers (deflated 50%) + adding: examples/inversion/data/QLDWestGravity.ers +(/usr/share/texlive/texmf-dist/tex/generic/uniquecounter/uniquecounter.sty (deflated 50%) adding: examples/inversion/data/QLDWestMagnetic.ers (deflated 50%) adding: examples/inversion/data/GravitySmall.nc (deflated 46%) - adding: examples/inversion/data/MagneticSmall.nc -(/usr/share/texlive/texmf-dist/tex/latex/base/atveryend-ltx.sty)/usr/bin/python3 scripts/py_comp.py downunder/py_src/apps/MTModels.py debian/tmp3/posix/downunder/apps/MTModels.pyc - (deflated 43%) + adding: examples/inversion/data/MagneticSmall.nc (deflated 43%) adding: examples/inversion/data/QLDWestGravity.nc -(/usr/share/texlive/texmf-dist/tex/latex/fancyhdr/fancyhdr.sty) -(/usr/share/texlive/texmf-dist/tex/latex/geometry/geometry.sty (deflated 12%) - adding: examples/inversion/data/QLDWestMagnetic.nc -(/usr/share/texlive/texmf-dist/tex/latex/rerunfilecheck/rerunfilecheck.sty -(/usr/share/texlive/texmf-dist/tex/latex/fncychap/fncychap.styThis is pdfTeX, Version 3.14159265-2.6-1.40.21 (TeX Live 2020/Debian) (preloaded format=pdflatex) +Writing index file user.idx +(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1ptm.fd) +(/usr/share/texlive/texmf-dist/tex/generic/iftex/ifvtex.sty)))This is pdfTeX, Version 3.14159265-2.6-1.40.21 (TeX Live 2020/Debian) (preloaded format=pdflatex) restricted \write18 enabled. -) -(/usr/share/texlive/texmf-dist/tex/latex/graphics/keyval.sty)) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/user_de -fs.tex (deflated 9%) - adding: examples/inversion/data/HalfSphere_v1.4.msh -(/usr/share/texlive/texmf-dist/tex/generic/iftex/ifvtex.sty (/usr/share/texlive/texmf-dist/tex/latex/subfigure/subfigure.sty(cat doc/doxygen/doxygen_esys; echo "PROJECT_NUMBER="Revision_`svnversion`""; echo OUTPUT_DIRECTORY="/build/reproducible-path/python-escript-5.6/debian/stage3/release/doc/doxygen" ) | doxygen - - -**************************************** -* Local config file subfigure.cfg used * -**************************************** -(/usr/share/texlive/texmf-dist/tex/latex/subfigure/subfigure.cfg) -(/usr/share/texlive/texmf-dist/tex/generic/iftex/iftex.sty))) -(/usr/share/texlive/texmf-dist/tex/generic/uniquecounter/uniquecounter.sty))) + (deflated 12%) + adding: examples/inversion/data/QLDWestMagnetic.nc +(/usr/share/texlive/texmf-dist/tex/generic/iftex/iftex.sty)) +(/usr/share/texlive/texmf-dist/tex/latex/oberdiek/hypcap.sty +(/usr/share/texlive/texmf-dist/tex/latex/l3backend/l3backend-pdftex.def (deflated 9%) + adding: examples/inversion/data/HalfSphere_v1.4.msh)) Package geometry Warning: Over-specification in `h'-direction. `width' (478.00812pt) is ignored. ) -(/usr/share/texlive/texmf-dist/tex/latex/graphics/color.sty -(/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/color.cfg)) -(/usr/share/texlive/texmf-dist/tex/latex/oberdiek/hypcap.sty (/usr/share/texlive/texmf-dist/tex/latex/psnfss/times.sty)) -(/usr/share/texlive/texmf-dist/tex/latex/ccaption/ccaption.sty +(/usr/share/texlive/texmf-dist/tex/latex/fancyhdr/fancyhdr.sty) (/usr/share/texlive/texmf-dist/tex/latex/psnfss/times.sty) (/usr/share/texlive/texmf-dist/tex/latex/listings/listings.sty -(/usr/share/texlive/texmf-dist/tex/latex/fancyhdr/fancyhdr.sty)gzip -n -9 /build/reproducible-path/python-escript-5.6/debian/stage3/release/doc/escript_examples.tar -) -\@input{elist.aux} - -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/elist.t -ex/usr/bin/python3 scripts/py_comp.py downunder/py_src/apps/__init__.py debian/tmp3/posix/downunder/apps/__init__.pyc - (/usr/share/texlive/texmf-dist/tex/latex/listing/listing.sty -Package `listing', V1.2, <1999/05/25> -) (/usr/share/texlive/texmf-dist/tex/latex/fncychap/fncychap.sty) -(/usr/share/texlive/texmf-dist/tex/latex/listings/lstmisc.sty))) +No file user.aux. +*geometry* driver: auto-detecting +*geometry* detected driver: pdftex +(/usr/share/texlive/texmf-dist/tex/context/base/mkii/supp-pdf.mkii) +[Loading MPS to PDF converter (version 2006.09.02).] +) (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/inst -all_defs.tex) (/usr/share/texlive/texmf-dist/tex/latex/upquote/upquote.sty/usr/bin/python3 scripts/py_comp.py downunder/py_src/apps/dcModels.py debian/tmp3/posix/downunder/apps/dcModels.pyc - -(/usr/share/texlive/texmf-dist/tex/latex/listings/listings.cfg)) (/usr/share/texlive/texmf-dist/tex/latex/graphics/color.sty -(/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/color.cfg) -(/usr/share/texlive/texmf-dist/tex/latex/base/textcomp.sty)/usr/bin/python3 scripts/py_comp.py downunder/py_src/apps/gravityModels.py debian/tmp3/posix/downunder/apps/gravityModels.pyc - -(/usr/share/texlive/texmf-dist/tex/generic/iftex/ifpdf.sty))) +all_defs.tex/usr/bin/python3 scripts/py_comp.py downunder/py_src/__init__.py debian/tmp3/posix/downunder/__init__.pyc + (/usr/share/texlive/texmf-dist/tex/latex/graphics/color.sty +(/usr/share/texlive/texmf-dist/tex/latex/listings/lstmisc.sty (/usr/share/texlive/texmf-dist/tex/latex/epstopdf-pkg/epstopdf-base.sty +(/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/color.cfg))) +(/usr/share/texlive/texmf-dist/tex/latex/latexconfig/epstopdf-sys.cfg) (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/elis -t.texInstall file: "debian/tmp3/posix/downunder/__init__.pyc" as "debian/stage3/esys/downunder/__init__.pyc" - -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/verinfo -.tex) (/usr/share/texlive/texmf-dist/tex/latex/listing/listing.sty -(/usr/share/texlive/texmf-dist/tex/latex/base/makeidx.sty) +t.tex) +(/usr/share/texlive/texmf-dist/tex/latex/listings/listings.cfg)/usr/bin/python3 scripts/py_comp.py downunder/py_src/apps/MTModels.py debian/tmp3/posix/downunder/apps/MTModels.pyc +) (/usr/share/texlive/texmf-dist/tex/latex/listing/listing.sty Package `listing', V1.2, <1999/05/25> -)/usr/bin/python3 scripts/py_comp.py downunder/py_src/apps/magneticModels.py debian/tmp3/posix/downunder/apps/magneticModels.pyc -)entering extended mode +))) +(/usr/share/texlive/texmf-dist/tex/latex/hyperref/nameref.sty +(/usr/share/texlive/texmf-dist/tex/generic/iftex/ifpdf.sty) (/usr/share/texlive/texmf-dist/tex/latex/upquote/upquote.sty +(/usr/share/texlive/texmf-dist/tex/latex/refcount/refcount.sty +(/usr/share/texlive/texmf-dist/tex/latex/base/makeidx.sty)) +(/usr/share/texlive/texmf-dist/tex/latex/base/textcomp.sty)) +(/usr/share/texlive/texmf-dist/tex/latex/url/url.sty) +(/usr/share/texlive/texmf-dist/tex/generic/gettitlestring/gettitlestring.sty +(/usr/share/texlive/texmf-dist/tex/latex/comment/comment.sty +Excluding comment 'comment') +(/usr/share/texlive/texmf-dist/tex/latex/tools/xspace.sty) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/veri +nfo.tex))(cat doc/doxygen/doxygen_esys; echo "PROJECT_NUMBER="Revision_`svnversion`""; echo OUTPUT_DIRECTORY="/build/reproducible-path/python-escript-5.6/debian/stage3/release/doc/doxygen" ) | doxygen - +) +(/usr/share/texlive/texmf-dist/tex/latex/graphics/graphicx.sty +Writing index file install.idx +(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1ptm.fd)entering extended mode LaTeX2e <2020-10-01> patch level 4 -L3 programming layer <2021-01-09>) xparse <2020-03-03> +L3 programming layer <2021-01-09> xparse <2020-03-03> +(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1phv.fd) (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/in version.tex -(/usr/share/texlive/texmf-dist/tex/latex/url/url.sty) -Writing index file user.idx -(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1ptm.fd) (/usr/share/texlive/texmf-dist/tex/latex/upquote/upquote.sty -(/usr/share/texlive/texmf-dist/tex/latex/tools/xspace.sty) +(/usr/share/texlive/texmf-dist/tex/latex/graphics/graphics.stygzip -n -9 /build/reproducible-path/python-escript-5.6/debian/stage3/release/doc/escript_examples.tar + [1 +(/usr/share/texlive/texmf-dist/tex/latex/l3backend/l3backend-pdftex.def{/var/lib/texmf/fo +nts/map/pdftex/updmap/pdftex.map +(/usr/share/texlive/texmf-dist/tex/latex/graphics/trig.sty)})] (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/es -ysdoc.clsInstall file: "debian/tmp3/posix/downunder/apps/MTModels.pyc" as "debian/stage3/esys/downunder/apps/MTModels.pyc" - -(/usr/share/texlive/texmf-dist/tex/latex/base/textcomp.sty))/usr/bin/python3 scripts/py_comp.py downunder/py_src/apps/seismicModels.py debian/tmp3/posix/downunder/apps/seismicModels.pyc - -(/usr/share/texlive/texmf-dist/tex/latex/l3backend/l3backend-pdftex.def -(/usr/share/texlive/texmf-dist/tex/latex/graphics/graphicx.sty) +ysdoc.cls +(/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/graphics.cfg) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/copyrig +hts.tex +(/usr/share/texlive/texmf-dist/tex/latex/graphics-def/pdftex.def (/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1pcr.fd))) +(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsa.fd)) Document Class: esysdoc (/usr/share/texlive/texmf-dist/tex/latex/base/book.cls -(/usr/share/texlive/texmf-dist/tex/latex/comment/comment.sty -Excluding comment 'comment') +(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsb.fd)/usr/bin/python3 scripts/py_comp.py downunder/py_src/apps/__init__.py debian/tmp3/posix/downunder/apps/__init__.pyc +) Document Class: book 2020/04/10 v1.4m Standard LaTeX document class -(/usr/share/texlive/texmf-dist/tex/latex/base/bk10.clo -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/veri -nfo.tex)) -(/usr/share/texlive/texmf-dist/tex/latex/graphics/graphics.sty) -(/usr/share/texlive/texmf-dist/tex/latex/graphics/trig.sty) -Writing index file install.idx -(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1ptm.fd) -(/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/graphics.cfg) -(/usr/share/texlive/texmf-dist/tex/latex/graphics-def/pdftex.def -(/usr/share/texlive/texmf-dist/tex/latex/geometry/geometry.sty) -No file user.aux. +(/usr/share/texlive/texmf-dist/tex/latex/base/bk10.clo) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/docguid +e.tex [2 +(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsmath.sty]) +No file install.aux. *geometry* driver: auto-detecting *geometry* detected driver: pdftex -(/usr/share/texlive/texmf-dist/tex/context/base/mkii/supp-pdf.mkii)) +(/usr/share/texlive/texmf-dist/tex/context/base/mkii/supp-pdf.mkii) [Loading MPS to PDF converter (version 2006.09.02).] -) -(/usr/share/texlive/texmf-dist/tex/latex/l3backend/l3backend-pdftex.def) -(/usr/share/texlive/texmf-dist/tex/latex/graphics/keyval.sty) -(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsmath.sty (/usr/share/texlive/texmf-dist/tex/latex/epstopdf-pkg/epstopdf-base.sty -(/usr/share/texlive/texmf-dist/tex/generic/iftex/ifvtex.sty -(/usr/share/texlive/texmf-dist/tex/latex/latexconfig/epstopdf-sys.cfg) +) [3] For additional information on amsmath, use the `?' option. -(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amstext.sty)Install file: "debian/tmp3/posix/downunder/apps/magneticModels.pyc" as "debian/stage3/esys/downunder/apps/magneticModels.pyc" +(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amstext.sty (/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1ptm.fd) +(/usr/share/texlive/texmf-dist/tex/latex/geometry/geometry.sty/usr/bin/python3 scripts/py_comp.py downunder/py_src/apps/dcModels.py debian/tmp3/posix/downunder/apps/dcModels.pyc + (/usr/share/texlive/texmf-dist/tex/latex/epstopdf-pkg/epstopdf-base.sty -(/usr/share/texlive/texmf-dist/tex/generic/iftex/iftex.sty))Install file: "debian/tmp3/posix/downunder/apps/__init__.pyc" as "debian/stage3/esys/downunder/apps/__init__.pyc" +LaTeX Warning: Reference `app:py3' on page 4 undefined on input line 74. -(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsgen.sty/usr/bin/python3 scripts/py_comp.py downunder/py_src/coordinates.py debian/tmp3/posix/downunder/coordinates.pyc -) (deflated 65%) -) -No file install.aux. -*geometry* driver: auto-detecting -*geometry* detected driver: pdftex -(/usr/share/texlive/texmf-dist/tex/context/base/mkii/supp-pdf.mkii -[Loading MPS to PDF converter (version 2006.09.02).] -) + +LaTeX Warning: Reference `app:changes' on page 4 undefined on input line 80. + + +LaTeX Warning: Reference `app:ourrefs' on page 4 undefined on input line 85. + +[4 +(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsgen.sty])) (deflated 65%) + +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/current +dev.tex +(/usr/share/texlive/texmf-dist/tex/latex/latexconfig/epstopdf-sys.cfg)) +(/usr/share/texlive/texmf-dist/tex/latex/graphics/keyval.sty) [5])/usr/bin/python3 scripts/py_comp.py downunder/py_src/apps/gravityModels.py debian/tmp3/posix/downunder/apps/gravityModels.pyc + [6] +(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsbsy.sty) [7] +(/usr/share/texlive/texmf-dist/tex/generic/iftex/ifvtex.sty (/usr/share/texlive/texmf-dist/tex/latex/hyperref/nameref.sty +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/Tutoria +lPDE.tex +(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsopn.sty [8]) +(/usr/share/texlive/texmf-dist/tex/generic/iftex/iftex.sty))Install file: "debian/tmp3/posix/downunder/__init__.pyc" as "debian/stage3/esys/downunder/__init__.pyc" + +Chapter 1. + +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/firstst +ep.tex +(/usr/share/texlive/texmf-dist/tex/latex/refcount/refcount.sty))/usr/bin/python3 scripts/py_comp.py downunder/py_src/apps/magneticModels.py debian/tmp3/posix/downunder/apps/magneticModels.pyc + Package geometry Warning: Over-specification in `h'-direction. `width' (478.00812pt) is ignored. ) -(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsbsy.sty)/usr/bin/python3 scripts/py_comp.py downunder/py_src/costfunctions.py debian/tmp3/posix/downunder/costfunctions.pyc - (/usr/share/texlive/texmf-dist/tex/latex/psnfss/times.sty) -(/usr/share/texlive/texmf-dist/tex/latex/refcount/refcount.sty (/usr/share/texlive/texmf-dist/tex/latex/epstopdf-pkg/epstopdf-base.stysh: 1: svnversion: not found +(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amsfonts.sty (/usr/share/texlive/texmf-dist/tex/latex/psnfss/times.sty)) +(/usr/share/texlive/texmf-dist/tex/generic/gettitlestring/gettitlestring.sty/usr/bin/python3 scripts/py_comp.py downunder/py_src/apps/seismicModels.py debian/tmp3/posix/downunder/apps/seismicModels.pyc ) -(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsopn.stywarning: Tag 'TCL_SUBST' at line 237 of file '-' has become obsolete. - To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" -warning: Tag 'COLS_IN_ALPHA_INDEX' at line 1026 of file '-' has become obsolete. - To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" -(/usr/share/texlive/texmf-dist/tex/latex/latexconfig/epstopdf-sys.cfg))warning: Tag 'PERL_PATH' at line 2057 of file '-' has become obsolete. - To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" -warning: Tag 'MSCGEN_PATH' at line 2079 of file '-' has become obsolete. - To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" -warning: argument 'a4wide' for option PAPER_TYPE is not a valid enum value -Using the default: a4! -) -(/usr/share/texlive/texmf-dist/tex/latex/listings/listings.sty)/usr/bin/python3 scripts/py_comp.py downunder/py_src/datasources.py debian/tmp3/posix/downunder/datasources.pyc +LaTeX Warning: Reference `fig:FirstSteps.1' on page 9 undefined on input line 3 +3. -(/usr/share/texlive/texmf-dist/tex/generic/gettitlestring/gettitlestring.sty -(/usr/share/texlive/texmf-dist/tex/latex/hyperref/nameref.sty) -(/usr/share/texlive/texmf-dist/tex/latex/listings/lstmisc.sty -(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amsfonts.sty -(/usr/share/texlive/texmf-dist/tex/latex/refcount/refcount.sty))Install file: "debian/tmp3/posix/downunder/apps/dcModels.pyc" as "debian/stage3/esys/downunder/apps/dcModels.pyc" -))/usr/bin/python3 scripts/py_comp.py downunder/py_src/dcresistivityforwardmodeling.py debian/tmp3/posix/downunder/dcresistivityforwardmodeling.pyc -(/usr/share/texlive/texmf-dist/tex/latex/listings/listings.cfg) -(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amssymb.sty) -(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1phv.fd) -(/usr/share/texlive/texmf-dist/tex/generic/gettitlestring/gettitlestring.sty) -(/usr/share/texlive/texmf-dist/tex/generic/iftex/ifpdf.sty [1){/var/lib/texmf/fo -nts/map/pdftex/updmap/pdftex.map)}]) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/copyrig -hts.tex -(/usr/share/texlive/texmf-dist/tex/latex/underscore/underscore.sty -(/usr/share/texlive/texmf-dist/tex/latex/base/makeidx.sty)Install file: "debian/tmp3/posix/downunder/apps/gravityModels.pyc" as "debian/stage3/esys/downunder/apps/gravityModels.pyc" -) (/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1pcr.fd) -(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsa.fd) +LaTeX Warning: Reference `eq:FirstSteps.1' on page 9 undefined on input line 58 +. + +[9Install file: "debian/tmp3/posix/downunder/apps/MTModels.pyc" as "debian/stage3/esys/downunder/apps/MTModels.pyc" + +(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amssymb.sty +(/usr/share/texlive/texmf-dist/tex/latex/listings/listings.sty ]))/usr/bin/python3 scripts/py_comp.py downunder/py_src/coordinates.py debian/tmp3/posix/downunder/coordinates.pyc + (/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1phv.fd) -(/usr/share/texlive/texmf-dist/tex/latex/url/url.sty) -(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsb.fd) -(/usr/share/texlive/texmf-dist/tex/latex/hyperref/hyperref.sty -(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1pcr.fd))/usr/bin/python3 scripts/py_comp.py downunder/py_src/domainbuilder.py debian/tmp3/posix/downunder/domainbuilder.pyc -Install file: "debian/tmp3/posix/downunder/costfunctions.pyc" as "debian/stage3/esys/downunder/costfunctions.pyc" +(/usr/share/texlive/texmf-dist/tex/latex/listings/lstmisc.sty +(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1pcr.fd -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/docguid -e.tex [2 -(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsa.fd)] -(/usr/share/texlive/texmf-dist/tex/latex/tools/xspace.sty) -(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsb.fd) -(/usr/share/texlive/texmf-dist/tex/generic/ltxcmds/ltxcmds.sty)) [3] [1{/var/lib/texmf/fo -nts/map/pdftex/updmap/pdftex.map} (/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1ptm.fd) -(/usr/share/texlive/texmf-dist/tex/latex/graphics/graphicx.sty]Install file: "debian/tmp3/posix/downunder/apps/seismicModels.pyc" as "debian/stage3/esys/downunder/apps/seismicModels.pyc" -/usr/bin/python3 scripts/py_comp.py downunder/py_src/forwardmodels/__init__.py debian/tmp3/posix/downunder/forwardmodels/__init__.pyc +LaTeX Warning: Reference `fig:FirstSteps.1' on page 10 undefined on input line +94. -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/docg -uide.tex -LaTeX Warning: Reference `app:py3' on page 4 undefined on input line 74. +LaTeX Warning: Reference `eq:FirstSteps.2' on page 10 undefined on input line 9 +8. -LaTeX Warning: Reference `app:changes' on page 4 undefined on input line 80. +LaTeX Warning: Reference `eq:FirstSteps.1.sum' on page 10 undefined on input li +ne 117. -LaTeX Warning: Reference `app:ourrefs' on page 4 undefined on input line 85. +LaTeX Warning: Reference `eq:FirstSteps.2' on page 10 undefined on input line 1 +18. -[4] + +LaTeX Warning: Reference `eq:FirstSteps.2d' on page 10 undefined on input line +119. + + +LaTeX Warning: Reference `fig:FirstSteps.2' on page 10 undefined on input line +145. + + +LaTeX Warning: Citation `Zienc' on page 10 undefined on input line 148. + + +LaTeX Warning: Citation `NumHand' on page 10 undefined on input line 148. + +[10 +(/usr/share/texlive/texmf-dist/tex/latex/underscore/underscore.sty))]) +(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsa.fd) +(/usr/share/texlive/texmf-dist/tex/latex/listings/listings.cfg) +(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsb.fd)) (/usr/share/texlive/texmf-dist/tex/latex/listings/lstlang1.sty +(/usr/share/texlive/texmf-dist/tex/latex/hyperref/hyperref.sty [1{/var/lib/texmf/fo +nts/map/pdftex/updmap/pdftex.map}] +(/usr/share/texlive/texmf-dist/tex/generic/iftex/ifpdf.sty) +(/usr/share/texlive/texmf-dist/tex/generic/ltxcmds/ltxcmds.sty +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/docg +uide.tex)) [2 +(/usr/share/texlive/texmf-dist/tex/latex/base/makeidx.sty)]) (/usr/share/texlive/texmf-dist/tex/generic/pdftexcmds/pdftexcmds.sty -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/current -dev.tex) [5] [2 -(/usr/share/texlive/texmf-dist/tex/latex/graphics/graphics.sty) [6]] -(/usr/share/texlive/texmf-dist/tex/generic/infwarerr/infwarerr.sty) -(/usr/share/texlive/texmf-dist/tex/latex/graphics/trig.sty) [3]/usr/bin/python3 scripts/py_comp.py downunder/py_src/forwardmodels/acoustic.py debian/tmp3/posix/downunder/forwardmodels/acoustic.pyc - [7] +(/usr/share/texlive/texmf-dist/tex/latex/url/url.sty) [3] (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/intr -o.tex -(/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/graphics.cfg)) [4] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/Tutoria -lPDE.tex [8 -(/usr/share/texlive/texmf-dist/tex/latex/graphics-def/pdftex.def] +o.tex [4] +(/usr/share/texlive/texmf-dist/tex/generic/infwarerr/infwarerr.sty)Install file: "debian/tmp3/posix/downunder/apps/dcModels.pyc" as "debian/stage3/esys/downunder/apps/dcModels.pyc" + +(/usr/share/texlive/texmf-dist/tex/latex/tools/xspace.sty)) Chapter 1. LaTeX Warning: Reference `chap:source' on page 5 undefined on input line 30. @@ -2676,76 +2729,176 @@ LaTeX Warning: Reference `app:trilinos' on page 5 undefined on input line 33. -))) [5)] -Chapter 1. +) [5Install file: "debian/tmp3/posix/downunder/apps/__init__.pyc" as "debian/stage3/esys/downunder/apps/__init__.pyc" +Install file: "debian/tmp3/posix/downunder/apps/gravityModels.pyc" as "debian/stage3/esys/downunder/apps/gravityModels.pyc" +/usr/bin/python3 scripts/py_comp.py downunder/py_src/costfunctions.py debian/tmp3/posix/downunder/costfunctions.pyc + + +LaTeX Warning: Reference `chap:finley' on page 11 undefined on input line 194. + + +LaTeX Warning: Reference `chap:ripley' on page 11 undefined on input line 194. -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/firstst -ep.tex -(/usr/share/texlive/texmf-dist/tex/generic/kvsetkeys/kvsetkeys.sty) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/flat -pak.texInstall file: "debian/tmp3/posix/downunder/coordinates.pyc" as "debian/stage3/esys/downunder/coordinates.pyc" - [6] -(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsmath.sty/usr/bin/python3 scripts/py_comp.py downunder/py_src/forwardmodels/base.py debian/tmp3/posix/downunder/forwardmodels/base.pyc +LaTeX Warning: Reference `chap:speckley' on page 11 undefined on input line 195 +. + +[11sh: line 1: svnversion: command not found +] ] +(/usr/share/texlive/texmf-dist/tex/latex/graphics/graphicx.sty +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/flat +pak.tex [6] +(/usr/share/texlive/texmf-dist/tex/generic/kvsetkeys/kvsetkeys.sty) +(/usr/share/texlive/texmf-dist/tex/latex/graphics/graphics.sty Chapter 2. -(/usr/share/texlive/texmf-dist/tex/latex/listings/lstlang1.sty +(/usr/share/texlive/texmf-dist/tex/latex/listings/lstlang1.stywarning: Tag 'TCL_SUBST' at line 237 of file '-' has become obsolete. + To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" +warning: Tag 'COLS_IN_ALPHA_INDEX' at line 1026 of file '-' has become obsolete. + To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" +warning: Tag 'PERL_PATH' at line 2057 of file '-' has become obsolete. + To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" +warning: Tag 'MSCGEN_PATH' at line 2079 of file '-' has become obsolete. + To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" +warning: argument 'a4wide' for option PAPER_TYPE is not a valid enum value +Using the default: a4! + (/usr/share/texlive/texmf-dist/tex/generic/kvdefinekeys/kvdefinekeys.sty) +(/usr/share/texlive/texmf-dist/tex/latex/graphics/trig.sty) +(/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/graphics.cfg) +(/usr/share/texlive/texmf-dist/tex/latex/graphics-def/pdftex.def +(/usr/share/texlive/texmf-dist/tex/generic/pdfescape/pdfescape.sty))))) +(/usr/share/texlive/texmf-dist/tex/latex/listings/lstlang2.sty +(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsmath.sty +(/usr/share/texlive/texmf-dist/tex/latex/hycolor/hycolor.sty))/usr/bin/python3 scripts/py_comp.py downunder/py_src/datasources.py debian/tmp3/posix/downunder/datasources.pyc + +(/usr/share/texlive/texmf-dist/tex/latex/listings/lstlang3.sty/usr/bin/python3 scripts/py_comp.py downunder/py_src/dcresistivityforwardmodeling.py debian/tmp3/posix/downunder/dcresistivityforwardmodeling.pyc + For additional information on amsmath, use the `?' option. -(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amstext.styInstall file: "debian/tmp3/posix/downunder/datasources.pyc" as "debian/stage3/esys/downunder/datasources.pyc" +(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amstext.sty +(/usr/share/texlive/texmf-dist/tex/latex/letltxmacro/letltxmacro.sty))Install file: "debian/tmp3/posix/downunder/apps/seismicModels.pyc" as "debian/stage3/esys/downunder/apps/seismicModels.pyc" +(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsgen.sty)) +(/usr/share/texlive/texmf-dist/tex/latex/auxhook/auxhook.sty)Install file: "debian/tmp3/posix/downunder/apps/magneticModels.pyc" as "debian/stage3/esys/downunder/apps/magneticModels.pyc" +) +(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsbsy.sty [7])/usr/bin/python3 scripts/py_comp.py downunder/py_src/domainbuilder.py debian/tmp3/posix/downunder/domainbuilder.pyc -LaTeX Warning: Reference `fig:FirstSteps.1' on page 9 undefined on input line 3 -3. + +LaTeX Warning: Reference `eq:FirstSteps.2' on page 12 undefined on input line 2 +05. -LaTeX Warning: Reference `eq:FirstSteps.1' on page 9 undefined on input line 58 -. +LaTeX Warning: Reference `eq:FirstSteps.2c' on page 12 undefined on input line +214. -[9 ] -(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsgen.sty) -(/usr/share/texlive/texmf-dist/tex/generic/pdfescape/pdfescape.sty)/usr/bin/python3 scripts/py_comp.py downunder/py_src/forwardmodels/dcresistivity.py debian/tmp3/posix/downunder/forwardmodels/dcresistivity.pyc -)) -(/usr/share/texlive/texmf-dist/tex/latex/listings/lstlang2.sty -(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsbsy.sty) -(/usr/share/texlive/texmf-dist/tex/latex/hycolor/hycolor.styInstall file: "debian/tmp3/posix/downunder/dcresistivityforwardmodeling.pyc" as "debian/stage3/esys/downunder/dcresistivityforwardmodeling.pyc" + +LaTeX Warning: Reference `ESCRIPT CHAP' on page 12 undefined on input line 223. + + +[12 +(/usr/share/texlive/texmf-dist/tex/latex/kvoptions/kvoptions.sty] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/cond +a.tex [8]) +(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsopn.sty +Chapter 3. )) +(/usr/share/texlive/texmf-dist/tex/latex/hyperref/pd1enc.def [9]Install file: "debian/tmp3/posix/downunder/costfunctions.pyc" as "debian/stage3/esys/downunder/costfunctions.pyc" +Install file: "debian/tmp3/posix/downunder/coordinates.pyc" as "debian/stage3/esys/downunder/coordinates.pyc" +) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/dock +er.tex [10])/usr/bin/python3 scripts/py_comp.py downunder/py_src/forwardmodels/__init__.py debian/tmp3/posix/downunder/forwardmodels/__init__.pyc -LaTeX Warning: Reference `fig:FirstSteps.1' on page 10 undefined on input line -94. +Chapter 4. +) [11] +(/usr/share/texlive/texmf-dist/tex/generic/intcalc/intcalc.sty) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/sour +ce.tex [12] +(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amsfonts.sty) +Chapter 5. +LaTeX Warning: Reference `sec:needpar' on page 13 undefined on input line 27. -LaTeX Warning: Reference `eq:FirstSteps.2' on page 10 undefined on input line 9 -8. +(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1ptm.fd)/usr/bin/python3 scripts/py_comp.py downunder/py_src/forwardmodels/acoustic.py debian/tmp3/posix/downunder/forwardmodels/acoustic.pyc +(/usr/share/texlive/texmf-dist/tex/generic/etexcmds/etexcmds.sty) +(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amssymb.sty -LaTeX Warning: Reference `eq:FirstSteps.1.sum' on page 10 undefined on input li -ne 117. +LaTeX Warning: Reference `app:cxxfeatures' on page 13 undefined on input line 4 +0. +[13] -LaTeX Warning: Reference `eq:FirstSteps.2' on page 10 undefined on input line 1 -18. +LaTeX Warning: Citation `matplotlib' on page 13 undefined on input line 312. -LaTeX Warning: Reference `eq:FirstSteps.2d' on page 10 undefined on input line -119. +LaTeX Warning: Citation `mayavi' on page 13 undefined on input line 317. -LaTeX Warning: Reference `fig:FirstSteps.2' on page 10 undefined on input line -145. +LaTeX Warning: Citation `VisIt' on page 13 undefined on input line 317. +[13)]/usr/bin/python3 scripts/py_comp.py downunder/py_src/forwardmodels/base.py debian/tmp3/posix/downunder/forwardmodels/base.pyc -LaTeX Warning: Citation `Zienc' on page 10 undefined on input line 148. +(/usr/share/texlive/texmf-dist/tex/latex/underscore/underscore.sty +LaTeX Warning: Reference `sec:build' on page 14 undefined on input line 79. -LaTeX Warning: Citation `NumHand' on page 10 undefined on input line 148. -[10 -(/usr/share/texlive/texmf-dist/tex/latex/listings/lstlang3.sty -(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsopn.styInstall file: "debian/tmp3/posix/downunder/domainbuilder.pyc" as "debian/stage3/esys/downunder/domainbuilder.pyc" -/usr/bin/python3 scripts/py_comp.py downunder/py_src/forwardmodels/gravity.py debian/tmp3/posix/downunder/forwardmodels/gravity.pyc -])) -(/usr/share/texlive/texmf-dist/tex/latex/letltxmacro/letltxmacro.sty)Doxygen version used: 1.9.1 +LaTeX Warning: Reference `sec:othersrc' on page 14 undefined on input line 102. + + + +LaTeX Warning: Reference `sec:debsrc' on page 14 undefined on input line 104. + + +LaTeX Warning: Reference `sec:ubsrc' on page 14 undefined on input line 105. + + +LaTeX Warning: Reference `sec:susesrc' on page 14 undefined on input line 106. + + +LaTeX Warning: Reference `sec:centossrc' on page 14 undefined on input line 107 +. + + +LaTeX Warning: Reference `sec:fedorasrc' on page 14 undefined on input line 108 +. + + +LaTeX Warning: Reference `sec:macportsrc' on page 14 undefined on input line 10 +9. + + +LaTeX Warning: Reference `sec:homebrewsrc' on page 14 undefined on input line 1 +10. + + +LaTeX Warning: Reference `sec:freebsdsrc' on page 14 undefined on input line 11 +1. + + +LaTeX Warning: Reference `sec:windowssrc' on page 14 undefined on input line 11 +2. + + +LaTeX Warning: Reference `sec:cleanup' on page 14 undefined on input line 115. + +[14]) +(/usr/share/texlive/texmf-dist/tex/generic/bitset/bitset.sty +(/usr/share/texlive/texmf-dist/tex/latex/hyperref/hyperref.sty +(/usr/share/texlive/texmf-dist/tex/generic/bigintcalc/bigintcalc.sty +(/usr/share/texlive/texmf-dist/tex/generic/ltxcmds/ltxcmds.sty))) [14 ] +(/usr/share/texlive/texmf-dist/tex/latex/base/atbegshi-ltx.sty) +(/usr/share/texlive/texmf-dist/tex/generic/infwarerr/infwarerr.sty) +Underfull \hbox (badness 10000) in paragraph at lines 159--160 + + +Underfull \hbox (badness 10000) in paragraph at lines 207--208 + +[15)]) +(/usr/share/texlive/texmf-dist/tex/latex/hyperref/hpdftex.defInstall file: "debian/tmp3/posix/downunder/datasources.pyc" as "debian/stage3/esys/downunder/datasources.pyc" +Doxygen version used: 1.9.1 Searching for include files... Searching for example files... Searching for images... @@ -2795,130 +2948,164 @@ Preprocessing /build/reproducible-path/python-escript-5.6/escriptcore/src/BinaryDataReadyOps.h... Parsing file /build/reproducible-path/python-escript-5.6/escriptcore/src/BinaryDataReadyOps.h... Preprocessing /build/reproducible-path/python-escript-5.6/escriptcore/src/Data.cpp... -Parsing file /build/reproducible-path/python-escript-5.6/escriptcore/src (/usr/share/texlive/texmf-dist/tex/latex/listings/lstlang1.sty)/usr/bin/python3 scripts/py_comp.py downunder/py_src/forwardmodels/magnetic.py debian/tmp3/posix/downunder/forwardmodels/magnetic.pyc +Parsing file /build/reproducible-path/python-escript-5.6/escriptcore/src/usr/bin/python3 scripts/py_comp.py downunder/py_src/forwardmodels/dcresistivity.py debian/tmp3/posix/downunder/forwardmodels/dcresistivity.pyc + +(/usr/share/texlive/texmf-dist/tex/generic/kvsetkeys/kvsetkeys.sty) +(/usr/share/texlive/texmf-dist/tex/latex/base/atveryend-ltx.sty) +(/usr/share/texlive/texmf-dist/tex/generic/kvdefinekeys/kvdefinekeys.sty)Install file: "debian/tmp3/posix/downunder/domainbuilder.pyc" as "debian/stage3/esys/downunder/domainbuilder.pyc" + + +LaTeX Warning: Reference `fig:FirstSteps.3b' on page 15 undefined on input line + 407. + + +LaTeX Warning: Citation `matplotlib' on page 15 undefined on input line 408. + + +LaTeX Warning: Citation `mayavi' on page 15 undefined on input line 426. + + +LaTeX Warning: Citation `VisIt' on page 15 undefined on input line 426. + +[15 ]/usr/bin/python3 scripts/py_comp.py downunder/py_src/forwardmodels/gravity.py debian/tmp3/posix/downunder/forwardmodels/gravity.pyc + + +LaTeX Warning: Reference `fig:FirstSteps.3' on page 16 undefined on input line +470. -(/usr/share/texlive/texmf-dist/tex/latex/auxhook/auxhook.sty)) [7] -(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amsfonts.sty) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/cond -a.tex -(/usr/share/texlive/texmf-dist/tex/latex/kvoptions/kvoptions.sty [8])) -Chapter 3. ) -(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amssymb.sty [9] -(/usr/share/texlive/texmf-dist/tex/latex/hyperref/pd1enc.def -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/dock -er.tex [10]Install file: "debian/tmp3/posix/downunder/forwardmodels/acoustic.pyc" as "debian/stage3/esys/downunder/forwardmodels/acoustic.pyc" -)) -Chapter 4. -)Install file: "debian/tmp3/posix/downunder/forwardmodels/__init__.pyc" as "debian/stage3/esys/downunder/forwardmodels/__init__.pyc" -/usr/bin/python3 scripts/py_comp.py downunder/py_src/forwardmodels/magnetotelluric2d.py debian/tmp3/posix/downunder/forwardmodels/magnetotelluric2d.pyc - [11] +(/usr/share/texlive/texmf-dist/tex/generic/pdfescape/pdfescape.sty -LaTeX Warning: Reference `chap:finley' on page 11 undefined on input line 194. +LaTeX Warning: Reference `sec:cleanup' on page 16 undefined on input line 240. -LaTeX Warning: Reference `chap:ripley' on page 11 undefined on input line 194. +LaTeX Warning: Reference `sec:cleanup' on page 16 undefined on input line 268. -LaTeX Warning: Reference `chap:speckley' on page 11 undefined on input line 195 -. +Overfull \hbox (19.96072pt too wide) in paragraph at lines 278--279 +[][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][] +[16] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/diffusi +on.tex +(/usr/share/texlive/texmf-dist/tex/latex/rerunfilecheck/rerunfilecheck.sty) +(/usr/share/texlive/texmf-dist/tex/latex/hycolor/hycolor.sty) -[11 -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/sour -ce.tex -(/usr/share/texlive/texmf-dist/tex/latex/underscore/underscore.sty [12] ])) -Chapter 5. +LaTeX Warning: Reference `DIFFUSION FIG 1' on page 16 undefined on input line 2 +4. -LaTeX Warning: Reference `sec:needpar' on page 13 undefined on input line 27. -(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1ptm.fd)/usr/bin/python3 scripts/py_comp.py downunder/py_src/forwardmodels/pressure.py debian/tmp3/posix/downunder/forwardmodels/pressure.pyc +LaTeX Warning: Reference `DIFFUSION TEMP SEC' on page 16 undefined on input lin +e 32. -(/usr/share/texlive/texmf-dist/tex/latex/hyperref/hyperref.sty -LaTeX Warning: Reference `app:cxxfeatures' on page 13 undefined on input line 4 -0. +LaTeX Warning: Reference `DIFFUSION HELM SEC' on page 16 undefined on input lin +e 35. -[13 -(/usr/share/texlive/texmf-dist/tex/generic/etexcmds/etexcmds.sty])Install file: "debian/tmp3/posix/downunder/forwardmodels/base.pyc" as "debian/stage3/esys/downunder/forwardmodels/base.pyc" -(/usr/share/texlive/texmf-dist/tex/generic/ltxcmds/ltxcmds.sty)/usr/bin/python3 scripts/py_comp.py downunder/py_src/forwardmodels/subsidence.py debian/tmp3/posix/downunder/forwardmodels/subsidence.pyc +LaTeX Warning: Reference `DIFFUSION TRANS SEC' on page 16 undefined on input li +ne 36. -LaTeX Warning: Reference `sec:build' on page 14 undefined on input line 79. +LaTeX Warning: Reference `FirstSteps' on page 16 undefined on input line 49. +[16 ]Install file: "debian/tmp3/posix/downunder/forwardmodels/__init__.pyc" as "debian/stage3/esys/downunder/forwardmodels/__init__.pyc" +Install file: "debian/tmp3/posix/downunder/dcresistivityforwardmodeling.pyc" as "debian/stage3/esys/downunder/dcresistivityforwardmodeling.pyc" +Install file: "debian/tmp3/posix/downunder/forwardmodels/acoustic.pyc" as "debian/stage3/esys/downunder/forwardmodels/acoustic.pyc" -LaTeX Warning: Reference `sec:othersrc' on page 14 undefined on input line 102. +(/usr/share/texlive/texmf-dist/tex/latex/letltxmacro/letltxmacro.sty) +(/usr/share/texlive/texmf-dist/tex/generic/uniquecounter/uniquecounter.sty +LaTeX Warning: Reference `sec:cleanup' on page 17 undefined on input line 319. +Excluding 'comment' comment.)/usr/bin/python3 scripts/py_comp.py downunder/py_src/forwardmodels/magnetic.py debian/tmp3/posix/downunder/forwardmodels/magnetic.pyc +) [17 -LaTeX Warning: Reference `sec:debsrc' on page 14 undefined on input line 104. +LaTeX Warning: Reference `DIFFUSION TEMP EQ 1' on page 17 undefined on input li +ne 72. -LaTeX Warning: Reference `sec:ubsrc' on page 14 undefined on input line 105. +LaTeX Warning: Reference `DIFFUSION TEMP EQ 2' on page 17 undefined on input li +ne 79. -LaTeX Warning: Reference `sec:susesrc' on page 14 undefined on input line 106. +LaTeX Warning: Reference `DIFFUSION TEMP EQ 1' on page 17 undefined on input li +ne 92. -LaTeX Warning: Reference `sec:centossrc' on page 14 undefined on input line 107 -. +LaTeX Warning: Reference `DIFFUSION TEMP EQ 4' on page 17 undefined on input li +ne 98. -LaTeX Warning: Reference `sec:fedorasrc' on page 14 undefined on input line 108 -. +LaTeX Warning: Reference `DIFFUSION TEMP EQ 2' on page 17 undefined on input li +ne 104. -LaTeX Warning: Reference `sec:macportsrc' on page 14 undefined on input line 10 -9. +LaTeX Warning: Reference `DIFFUSION TEMP EQ 2222' on page 17 undefined on input + line 121. -LaTeX Warning: Reference `sec:homebrewsrc' on page 14 undefined on input line 1 -10. +LaTeX Warning: Reference `DIFFUSION HELM EQ 1' on page 17 undefined on input li +ne 126. -LaTeX Warning: Reference `sec:freebsdsrc' on page 14 undefined on input line 11 -1. +LaTeX Warning: Reference `DIFFUSION HELM EQ 2' on page 17 undefined on input li +ne 127. -LaTeX Warning: Reference `sec:windowssrc' on page 14 undefined on input line 11 -2. +LaTeX Warning: Reference `LINEARPDE.SINGLE.1' on page 17 undefined on input lin +e 136. -LaTeX Warning: Reference `sec:cleanup' on page 14 undefined on input line 115. +LaTeX Warning: Reference `LINEARPDE.SINGLE.1 TUTORIAL' on page 17 undefined on +input line 145. -[14] -(/usr/share/texlive/texmf-dist/tex/generic/pdftexcmds/pdftexcmds.sty/build/reproducible-path/python-escript-5.6/escriptcore/src/DataLazy.cpp:3008: warning: Reached end of file while still inside a (nested) comment. Nesting level 1 (probable line reference: 55) -(/usr/share/texlive/texmf-dist/tex/generic/bitset/bitset.styInstall file: "debian/tmp3/posix/downunder/forwardmodels/gravity.pyc" as "debian/stage3/esys/downunder/forwardmodels/gravity.pyc" +LaTeX Warning: Reference `LINEARPDE.SINGLE.3 TUTORIAL' on page 17 undefined on +input line 153. -(/usr/share/texlive/texmf-dist/tex/generic/infwarerr/infwarerr.sty)Install file: "debian/tmp3/posix/downunder/forwardmodels/dcresistivity.pyc" as "debian/stage3/esys/downunder/forwardmodels/dcresistivity.pyc" -/usr/bin/python3 scripts/py_comp.py downunder/py_src/inversioncostfunctions.py debian/tmp3/posix/downunder/inversioncostfunctions.pyc -) -(/usr/share/texlive/texmf-dist/tex/generic/bigintcalc/bigintcalc.sty)/usr/bin/python3 scripts/py_comp.py downunder/py_src/inversions.py debian/tmp3/posix/downunder/inversions.pyc -) -(/usr/share/texlive/texmf-dist/tex/generic/kvsetkeys/kvsetkeys.sty) -LaTeX Warning: Reference `eq:FirstSteps.2' on page 12 undefined on input line 2 -05. +LaTeX Warning: Reference `LINEARPDE.SINGLE.1 TUTORIAL' on page 17 undefined on +input line 154. -LaTeX Warning: Reference `eq:FirstSteps.2c' on page 12 undefined on input line -214. +LaTeX Warning: Reference `LINEARPDE.SINGLE.2 TUTORIAL' on page 17 undefined on +input line 154. -LaTeX Warning: Reference `ESCRIPT CHAP' on page 12 undefined on input line 223. +LaTeX Warning: Reference `FirstSteps' on page 17 undefined on input line 156. +[17)] +(/usr/share/texlive/texmf-dist/tex/latex/auxhook/auxhook.sty]) +(/usr/share/texlive/texmf-dist/tex/latex/oberdiek/hypcap.sty/build/reproducible-path/python-escript-5.6/escriptcore/src/DataLazy.cpp:3008: warning: Reached end of file while still inside a (nested) comment. Nesting level 1 (probable line reference: 55) -[12 -(/usr/share/texlive/texmf-dist/tex/generic/kvdefinekeys/kvdefinekeys.sty)] -Underfull \hbox (badness 10000) in paragraph at lines 159--160 +(/usr/share/texlive/texmf-dist/tex/latex/kvoptions/kvoptions.sty)/usr/bin/python3 scripts/py_comp.py downunder/py_src/forwardmodels/magnetotelluric2d.py debian/tmp3/posix/downunder/forwardmodels/magnetotelluric2d.pyc +)/usr/bin/python3 scripts/py_comp.py downunder/py_src/forwardmodels/pressure.py debian/tmp3/posix/downunder/forwardmodels/pressure.pyc + +(/usr/share/texlive/texmf-dist/tex/latex/fancyhdr/fancyhdr.sty +(/usr/share/texlive/texmf-dist/tex/latex/hyperref/pd1enc.def)) +(/usr/share/texlive/texmf-dist/tex/latex/fncychap/fncychap.sty [18)] +(/usr/share/texlive/texmf-dist/tex/generic/intcalc/intcalc.sty)) +LaTeX Warning: Reference `DIFFUSION HELM EQ 1' on page 18 undefined on input li +ne 161. -Underfull \hbox (badness 10000) in paragraph at lines 207--208 -[15/Data.cpp... +LaTeX Warning: Reference `DIFFUSION HELM EQ 2' on page 18 undefined on input li +ne 161. + + +LaTeX Warning: Reference `DIFFUSION HELM EQ 2' on page 18 undefined on input li +ne 177. + + +LaTeX Warning: Reference `LINEARPDE.SINGLE.2 TUTORIAL' on page 18 undefined on +input line 179. + +[18] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/coo +kbook_defs.tex/Data.cpp... Preprocessing /build/reproducible-path/python-escript-5.6/escriptcore/src/Data.h... Parsing file /build/reproducible-path/python-escript-5.6/escriptcore/src/Data.h... Preprocessing /build/reproducible-path/python-escript-5.6/escriptcore/src/DataAbstract.cpp... @@ -2965,42 +3152,52 @@ Parsing file /build/reproducible-path/python-escript-5.6/escriptcore/src/DataVector.h... Preprocessing /build/reproducible-path/python-escript-5.6/escriptcore/src/DataVectorAlt.cpp... Parsing -(/usr/share/texlive/texmf-dist/tex/latex/base/atbegshi-ltx.sty]) -(/usr/share/texlive/texmf-dist/tex/generic/pdfescape/pdfescape.sty))Install file: "debian/tmp3/posix/downunder/forwardmodels/magnetic.pyc" as "debian/stage3/esys/downunder/forwardmodels/magnetic.pyc" +(/usr/share/texlive/texmf-dist/tex/generic/etexcmds/etexcmds.sty (/usr/share/texlive/texmf-dist/tex/latex/subfigure/subfigure.sty +)Install file: "debian/tmp3/posix/downunder/forwardmodels/base.pyc" as "debian/stage3/esys/downunder/forwardmodels/base.pyc" +**************************************** +* Local config file subfigure.cfg used * +**************************************** +(/usr/share/texlive/texmf-dist/tex/latex/subfigure/subfigure.cfgInstall file: "debian/tmp3/posix/downunder/forwardmodels/gravity.pyc" as "debian/stage3/esys/downunder/forwardmodels/gravity.pyc" +)) +(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1pcr.fd) [19Install file: "debian/tmp3/posix/downunder/forwardmodels/dcresistivity.pyc" as "debian/stage3/esys/downunder/forwardmodels/dcresistivity.pyc" +] +(/usr/share/texlive/texmf-dist/tex/latex/graphics/epsfig.sty/usr/bin/python3 scripts/py_comp.py downunder/py_src/forwardmodels/subsidence.py debian/tmp3/posix/downunder/forwardmodels/subsidence.pyc +) -(/usr/share/texlive/texmf-dist/tex/latex/hyperref/hpdftex.def -(/usr/share/texlive/texmf-dist/tex/latex/hycolor/hycolor.sty)/usr/bin/python3 scripts/py_comp.py downunder/py_src/magtel1d.py debian/tmp3/posix/downunder/magtel1d.pyc +LaTeX Warning: Reference `FirstSteps' on page 19 undefined on input line 274. -(/usr/share/texlive/texmf-dist/tex/latex/base/atveryend-ltx.sty) -(/usr/share/texlive/texmf-dist/tex/latex/letltxmacro/letltxmacro.sty) -LaTeX Warning: Reference `sec:cleanup' on page 16 undefined on input line 240. +LaTeX Warning: Reference `DIFFUSION HELM EQ 1' on page 19 undefined on input li +ne 306. +[19] +(/usr/share/texlive/texmf-dist/tex/generic/bitset/bitset.sty +(/usr/share/texlive/texmf-dist/tex/latex/graphics/color.sty -LaTeX Warning: Reference `sec:cleanup' on page 16 undefined on input line 268. +LaTeX Warning: Reference `app:trilinos' on page 20 undefined on input line 618. -Overfull \hbox (19.96072pt too wide) in paragraph at lines 278--279 -[][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][] -[16]Install file: "debian/tmp3/posix/downunder/forwardmodels/magnetotelluric2d.pyc" as "debian/stage3/esys/downunder/forwardmodels/magnetotelluric2d.pyc" +[20/usr/bin/python3 scripts/py_comp.py downunder/py_src/inversioncostfunctions.py debian/tmp3/posix/downunder/inversioncostfunctions.pyc +] +(/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/color.cfg))) [21 +(/usr/share/texlive/texmf-dist/tex/generic/bigintcalc/bigintcalc.sty])/usr/bin/python3 scripts/py_comp.py downunder/py_src/inversions.py debian/tmp3/posix/downunder/inversions.pyc -(/usr/share/texlive/texmf-dist/tex/latex/auxhook/auxhook.styInstall file: "debian/tmp3/posix/downunder/forwardmodels/subsidence.pyc" as "debian/stage3/esys/downunder/forwardmodels/subsidence.pyc" +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/cxx1 +1.texInstall file: "debian/tmp3/posix/downunder/forwardmodels/magnetic.pyc" as "debian/stage3/esys/downunder/forwardmodels/magnetic.pyc" ) -(/usr/share/texlive/texmf-dist/tex/latex/rerunfilecheck/rerunfilecheck.sty - -LaTeX Warning: Citation `matplotlib' on page 13 undefined on input line 312. - - -LaTeX Warning: Citation `mayavi' on page 13 undefined on input line 317. - - -LaTeX Warning: Citation `VisIt' on page 13 undefined on input line 317. - -[13]/usr/bin/python3 scripts/py_comp.py downunder/py_src/magtel2d.py debian/tmp3/posix/downunder/magtel2d.pyc +(/usr/share/texlive/texmf-dist/tex/latex/base/alltt.sty) [22] +Appendix A. +) [23] -(/usr/share/texlive/texmf-dist/tex/latex/kvoptions/kvoptions.sty)/usr/bin/python3 scripts/py_comp.py downunder/py_src/mappings.py debian/tmp3/posix/downunder/mappings.pyc +LaTeX Warning: Reference `DIFFUSION TEMP EQ 1b' on page 20 undefined on input l +ine 318. -(/usr/share/texlive/texmf-dist/tex/latex/hyperref/pd1enc.deffile /build/reproducible-path/python-escript-5.6/escriptcore/src/DataVectorAlt.cpp... +[20 +(/usr/share/texlive/texmf-dist/tex/latex/base/textcomp.sty]) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/tril +inos.tex [24]Install file: "debian/tmp3/posix/downunder/forwardmodels/pressure.pyc" as "debian/stage3/esys/downunder/forwardmodels/pressure.pyc" +/usr/bin/python3 scripts/py_comp.py downunder/py_src/magtel1d.py debian/tmp3/posix/downunder/magtel1d.pyc +file /build/reproducible-path/python-escript-5.6/escriptcore/src/DataVectorAlt.cpp... Preprocessing /build/reproducible-path/python-escript-5.6/escriptcore/src/DataVectorAlt.h... Parsing file /build/reproducible-path/python-escript-5.6/escriptcore/src/DataVectorAlt.h... Preprocessing /build/reproducible-path/python-escript-5.6/escriptcore/src/DataVectorOps.cpp... @@ -3045,19 +3242,41 @@ Parsing file /build/reproducible-path/python-escript-5.6/escriptcore/src/FunctionSpace.cpp... Preprocessing /build/reproducible-path/python-escript-5.6/escriptcore/src/FunctionSpace.h... Parsing file /build/reproducible-path/ +(/usr/share/texlive/texmf-dist/tex/latex/base/atbegshi-ltx.sty) +(/usr/share/texlive/texmf-dist/tex/latex/setspace/setspace.sty) +Appendix B. +(/usr/share/texlive/texmf-dist/tex/latex/base/ts1cmtt.fd)) [25] +(/usr/share/texlive/texmf-dist/tex/latex/hyperref/hpdftex.def +(/usr/share/texlive/texmf-dist/tex/latex/xcolor/xcolor.sty [26] +(/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/color.cfg)Install file: "debian/tmp3/posix/downunder/forwardmodels/magnetotelluric2d.pyc" as "debian/stage3/esys/downunder/forwardmodels/magnetotelluric2d.pyc" -LaTeX Warning: Reference `sec:cleanup' on page 17 undefined on input line 319. +Underfull \vbox (badness 10000) has occurred while \output is active [27])/build/reproducible-path/python-escript-5.6/escriptcore/src/NCHelper.h:26: warning: include file string not found, perhaps you forgot to add its directory to INCLUDE_PATH? +/usr/bin/python3 scripts/py_comp.py downunder/py_src/magtel2d.py debian/tmp3/posix/downunder/magtel2d.pyc + +[28] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/inst +all.aux -Excluding 'comment' comment. -(/usr/share/texlive/texmf-dist/tex/generic/uniquecounter/uniquecounter.sty/usr/bin/python3 scripts/py_comp.py downunder/py_src/minimizers.py debian/tmp3/posix/downunder/minimizers.pyc -) [17]))) -(/usr/share/texlive/texmf-dist/tex/generic/intcalc/intcalc.sty)/build/reproducible-path/python-escript-5.6/escriptcore/src/NCHelper.h:26: warning: include file string not found, perhaps you forgot to add its directory to INCLUDE_PATH? +LaTeX Warning: Reference `DIFFUSION FIG 2' on page 21 undefined on input line 4 +03. -(/usr/share/texlive/texmf-dist/tex/latex/oberdiek/hypcap.styInstall file: "debian/tmp3/posix/downunder/forwardmodels/pressure.pyc" as "debian/stage3/esys/downunder/forwardmodels/pressure.pyc" -) [14Install file: "debian/tmp3/posix/downunder/inversioncostfunctions.pyc" as "debian/stage3/esys/downunder/inversioncostfunctions.pyc" - ]python-escript-5.6/escriptcore/src/FunctionSpace.h... +) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/intr +o.aux) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/flat +pak.aux) +(/usr/share/texlive/texmf-dist/tex/latex/base/atveryend-ltx.sty +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/wave.te +x) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/cond +a.aux) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/dock +er.aux) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/sour +ce.aux) +(/usr/share/texlive/texmf-dist/tex/latex/graphics/dvipsnam.def +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/cxx1 +1.aux)python-escript-5.6/escriptcore/src/FunctionSpace.h... Preprocessing /build/reproducible-path/python-escript-5.6/escriptcore/src/FunctionSpaceException.h... Parsing file /build/reproducible-path/python-escript-5.6/escriptcore/src/FunctionSpaceException.h... Preprocessing /build/reproducible-path/python-escript-5.6/escriptcore/src/FunctionSpaceFactory.cpp... @@ -3102,44 +3321,47 @@ Parsing file /build/reproducible-path/python-escript-5.6/escriptcore/src/Random.cpp... Preprocessing /build/reproducible-path/python-escript-5.6/escriptcore/src/Random.h... Parsing file /build/reproducible-path/pyt -(/usr/share/texlive/texmf-dist/tex/generic/etexcmds/etexcmds.sty -(/usr/share/texlive/texmf-dist/tex/latex/fancyhdr/fancyhdr.sty)/usr/bin/python3 scripts/py_comp.py downunder/py_src/regularizations.py debian/tmp3/posix/downunder/regularizations.pyc -)/usr/bin/python3 scripts/py_comp.py downunder/py_src/seismic.py debian/tmp3/posix/downunder/seismic.pyc - [18] -(/usr/share/texlive/texmf-dist/tex/latex/fncychap/fncychap.sty/usr/bin/python3 scripts/py_comp.py downunder/py_src/splitinversioncostfunctions.py debian/tmp3/posix/downunder/splitinversioncostfunctions.pyc -)) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/coo -kbook_defs.tex -(/usr/share/texlive/texmf-dist/tex/generic/bitset/bitset.styInstall file: "debian/tmp3/posix/downunder/magtel1d.pyc" as "debian/stage3/esys/downunder/magtel1d.pyc" - (/usr/share/texlive/texmf-dist/tex/latex/subfigure/subfigure.sty -Install file: "debian/tmp3/posix/downunder/magtel2d.pyc" as "debian/stage3/esys/downunder/magtel2d.pyc" -/usr/bin/python3 scripts/py_comp.py downunder/py_src/splitminimizers.py debian/tmp3/posix/downunder/splitminimizers.pyc +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/tril +inos.aux)) +kpathsea: Running mktexpk --mfmode / --bdpi 600 --mag 1+0/600 --dpi 600 tctt1000 +) +(/usr/share/texlive/texmf-dist/tex/latex/rerunfilecheck/rerunfilecheck.sty) +LaTeX Warning: Reference `WAVE FIG 1.2' on page 21 undefined on input line 61. -LaTeX Warning: Reference `fig:FirstSteps.3b' on page 15 undefined on input line - 407. +[21 ] +(/usr/share/texlive/texmf-dist/tex/latex/float/float.sty)/usr/bin/python3 scripts/py_comp.py downunder/py_src/mappings.py debian/tmp3/posix/downunder/mappings.pyc +/usr/bin/python3 scripts/py_comp.py downunder/py_src/minimizers.py debian/tmp3/posix/downunder/minimizers.pyc -LaTeX Warning: Citation `matplotlib' on page 15 undefined on input line 408. +LaTeX Warning: Reference `WAVE natural' on page 22 undefined on input line 87. -LaTeX Warning: Citation `mayavi' on page 15 undefined on input line 426. +LaTeX Warning: Reference `WAVE source' on page 22 undefined on input line 96. -LaTeX Warning: Citation `VisIt' on page 15 undefined on input line 426. +LaTeX Warning: Reference `WAVE FIG 1.1' on page 22 undefined on input line 97. -[15 ] -(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1pcr.fd -(/usr/share/texlive/texmf-dist/tex/generic/bigintcalc/bigintcalc.sty)**************************************** -* Local config file subfigure.cfg used * -**************************************** -(/usr/share/texlive/texmf-dist/tex/latex/subfigure/subfigure.cfg)) -LaTeX Warning: Reference `fig:FirstSteps.3' on page 16 undefined on input line -470. +LaTeX Warning: Reference `SEC LinearPDE' on page 22 undefined on input line 105 +. + +[22 ] +(/usr/share/texlive/texmf-dist/tex/latex/natbib/natbib.sty +(/usr/share/texlive/texmf-dist/tex/generic/uniquecounter/uniquecounter.sty)))) + +LaTeX Warning: Reference `WAVE dyn 3aa' on page 23 undefined on input line 121. -) [19)]hon-escript-5.6/escriptcore/src/Random.h... + +[23 ]Install file: "debian/tmp3/posix/downunder/inversions.pyc" as "debian/stage3/esys/downunder/inversions.pyc" +hon-escript-5.6/escriptcore/src/Random.h... Preprocessing /build/reproducible-path/python-escript-5.6/escriptcore/src/SolverOptions.cpp... Parsing file /build/reproducible-path/python-escript-5.6/escriptcore/src/SolverOptions.cpp... Preprocessing /build/reproducible-path/python-escript-5.6/escriptcore/src/SolverOptions.h... @@ -3183,110 +3405,35 @@ Preprocessing /build/reproducible-path/python-escript-5.6/dudley/src/Assemble_AverageElementData.cpp... Parsing file /build/reproducible-path/python-escript-5.6/dudley/src/Assemble_AverageElementData.cpp... Preprocessing /build/reproducible-path/python-escript-5.6/dudley/src/Assemble_CopyElementData.cpp... -Parsing file /build/reproducible-path/python-escript-5.6/dudley/src/Assemble_C) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/diffusi -on.tex/usr/bin/python3 scripts/py_comp.py downunder/py_src/splitregularizations.py debian/tmp3/posix/downunder/splitregularizations.pyc - -(/usr/share/texlive/texmf-dist/tex/latex/graphics/epsfig.sty)Install file: "debian/tmp3/posix/downunder/minimizers.pyc" as "debian/stage3/esys/downunder/minimizers.pyc" - - -LaTeX Warning: Reference `app:trilinos' on page 20 undefined on input line 618. - - -[20 - -LaTeX Warning: Reference `DIFFUSION FIG 1' on page 16 undefined on input line 2 -4. - - -LaTeX Warning: Reference `DIFFUSION TEMP SEC' on page 16 undefined on input lin -e 32. - - -LaTeX Warning: Reference `DIFFUSION HELM SEC' on page 16 undefined on input lin -e 35. +Parsing file /build/reproducible-path/python-escript-5.6/dudley/src/Assemble_CInstall file: "debian/tmp3/posix/downunder/inversioncostfunctions.pyc" as "debian/stage3/esys/downunder/inversioncostfunctions.pyc" +Install file: "debian/tmp3/posix/downunder/forwardmodels/subsidence.pyc" as "debian/stage3/esys/downunder/forwardmodels/subsidence.pyc" +(/usr/share/texlive/texmf-dist/tex/latex/oberdiek/hypcap.sty +(/usr/share/texlive/texmf-dist/tex/latex/cite/chapterbib.sty)) +\gdef\@extra@binfo{@-1}\@writefile{toc}{\gdef \the@ipfilectr{@-1}}\@writefile{l +of}{\gdef \the@ipfilectr{@-1}}\@writefile{lot}{\gdef \the@ipfilectr{@-1}} +\@input{elist.aux} -LaTeX Warning: Reference `DIFFUSION TRANS SEC' on page 16 undefined on input li -ne 36. +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/eli +st.tex +(/usr/share/texlive/texmf-dist/tex/latex/fancyhdr/fancyhdr.sty/usr/bin/python3 scripts/py_comp.py downunder/py_src/regularizations.py debian/tmp3/posix/downunder/regularizations.pyc + (/usr/share/texlive/texmf-dist/tex/latex/listing/listing.sty +Package `listing', V1.2, <1999/05/25> +))) +\gdef\@extra@binfo{}\@writefile{toc}{\gdef \the@ipfilectr{}}\@writefile{lof}{\g +def \the@ipfilectr{}}\@writefile{lot}{\gdef \the@ipfilectr{}} +) +(/usr/share/texlive/texmf-dist/tex/latex/fncychap/fncychap.sty) (/usr/share/texlive/texmf-dist/tex/latex/upquote/upquote.sty)Install file: "debian/tmp3/posix/downunder/magtel1d.pyc" as "debian/stage3/esys/downunder/magtel1d.pyc" +) +LaTeX Warning: Reference `LUMPING' on page 24 undefined on input line 214. -LaTeX Warning: Reference `FirstSteps' on page 16 undefined on input line 49. +[24 +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/ver +info.tex)]/usr/bin/python3 scripts/py_comp.py downunder/py_src/seismic.py debian/tmp3/posix/downunder/seismic.pyc -[16] (/usr/share/texlive/texmf-dist/tex/latex/graphics/color.sty -(/usr/share/texlive/texmf-dist/tex/latex/base/atbegshi-ltx.sty) -(/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/color.cfg)/usr/bin/python3 scripts/py_comp.py dudley/py_src/__init__.py debian/tmp3/posix/dudley/py/__init__.pyc -) ]) [21)] -(/usr/share/texlive/texmf-dist/tex/latex/hyperref/hpdftex.def -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/cxx1 -1.tex [22] - -LaTeX Warning: Reference `DIFFUSION TEMP EQ 1' on page 17 undefined on input li -ne 72. - - -LaTeX Warning: Reference `DIFFUSION TEMP EQ 2' on page 17 undefined on input li -ne 79. - - -LaTeX Warning: Reference `DIFFUSION TEMP EQ 1' on page 17 undefined on input li -ne 92. - - -LaTeX Warning: Reference `DIFFUSION TEMP EQ 4' on page 17 undefined on input li -ne 98. - - -LaTeX Warning: Reference `DIFFUSION TEMP EQ 2' on page 17 undefined on input li -ne 104. - - -LaTeX Warning: Reference `DIFFUSION TEMP EQ 2222' on page 17 undefined on input - line 121. - - -LaTeX Warning: Reference `DIFFUSION HELM EQ 1' on page 17 undefined on input li -ne 126. - - -LaTeX Warning: Reference `DIFFUSION HELM EQ 2' on page 17 undefined on input li -ne 127. - - -LaTeX Warning: Reference `LINEARPDE.SINGLE.1' on page 17 undefined on input lin -e 136. - - -LaTeX Warning: Reference `LINEARPDE.SINGLE.1 TUTORIAL' on page 17 undefined on -input line 145. - - -LaTeX Warning: Reference `LINEARPDE.SINGLE.3 TUTORIAL' on page 17 undefined on -input line 153. - - -LaTeX Warning: Reference `LINEARPDE.SINGLE.1 TUTORIAL' on page 17 undefined on -input line 154. - - -LaTeX Warning: Reference `LINEARPDE.SINGLE.2 TUTORIAL' on page 17 undefined on -input line 154. - - -LaTeX Warning: Reference `FirstSteps' on page 17 undefined on input line 156. - -[17 -(/usr/share/texlive/texmf-dist/tex/latex/base/alltt.sty) -Appendix A. -)] [23] -(/usr/share/texlive/texmf-dist/tex/latex/base/atveryend-ltx.sty) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/tril -inos.tex -(/usr/share/texlive/texmf-dist/tex/latex/base/textcomp.styInstall file: "debian/tmp3/posix/downunder/regularizations.pyc" as "debian/stage3/esys/downunder/regularizations.pyc" - [24]Install file: "debian/tmp3/posix/downunder/mappings.pyc" as "debian/stage3/esys/downunder/mappings.pyc" -)opyElementData.cpp... +(/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/color.cfg))opyElementData.cpp... Preprocessing /build/reproducible-path/python-escript-5.6/dudley/src/Assemble_CopyNodalData.cpp... Parsing file /build/reproducible-path/python-escript-5.6/dudley/src/Assemble_CopyNodalData.cpp... Preprocessing /build/reproducible-path/python-escript-5.6/dudley/src/Assemble_getAssembleParameters.cpp... @@ -3331,51 +3478,20 @@ Parsing file /build/reproducible-path/python-escript-5.6/dudley/src/DudleyDomain.cpp... Preprocessing /build/reproducible-path/python-escript-5.6/dudley/src/DudleyDomain.h... Parsing file /build/reproducib -Appendix B. -(/usr/share/texlive/texmf-dist/tex/latex/base/ts1cmtt.fd) -(/usr/share/texlive/texmf-dist/tex/latex/setspace/setspace.sty) [25 -(/usr/share/texlive/texmf-dist/tex/latex/rerunfilecheck/rerunfilecheck.sty] [26 -(/usr/share/texlive/texmf-dist/tex/latex/xcolor/xcolor.sty] -Underfull \vbox (badness 10000) has occurred while \output is active [27] -(/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/color.cfg)) -[28] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/inst -all.aux -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/intr -o.aux) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/flat -pak.aux) - -LaTeX Warning: Reference `DIFFUSION HELM EQ 1' on page 18 undefined on input li -ne 161. - - -LaTeX Warning: Reference `DIFFUSION HELM EQ 2' on page 18 undefined on input li -ne 161. - - -LaTeX Warning: Reference `DIFFUSION HELM EQ 2' on page 18 undefined on input li -ne 177. +\@input{elist.aux} +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/el +ist.texInstall file: "debian/tmp3/posix/downunder/magtel2d.pyc" as "debian/stage3/esys/downunder/magtel2d.pyc" -LaTeX Warning: Reference `LINEARPDE.SINGLE.2 TUTORIAL' on page 18 undefined on -input line 179. +Writing index file cookbook.idx +(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1ptm.fd) (/usr/share/texlive/texmf-dist/tex/latex/listing/listing.sty +Package `listing', V1.2, <1999/05/25> +))/usr/bin/python3 scripts/py_comp.py downunder/py_src/splitinversioncostfunctions.py debian/tmp3/posix/downunder/splitinversioncostfunctions.pyc -[18 -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/cond -a.aux) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/dock -er.aux]) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/sour -ce.aux) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/cxx1 -1.aux) -(/usr/share/texlive/texmf-dist/tex/latex/graphics/dvipsnam.def -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/tril -inos.aux)) -(/usr/share/texlive/texmf-dist/tex/generic/uniquecounter/uniquecounter.sty -kpathsea: Running mktexpk --mfmode / --bdpi 600 --mag 1+0/600 --dpi 600 tctt1000 -le-path/python-escript-5.6/dudley/src/DudleyDomain.h... +(/usr/share/texlive/texmf-dist/tex/latex/l3backend/l3backend-pdftex.def) (/usr/share/texlive/texmf-dist/tex/latex/program/program.sty +(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsa.fd) +(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsb.fd) +(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/ueur.fd))le-path/python-escript-5.6/dudley/src/DudleyDomain.h... Preprocessing /build/reproducible-path/python-escript-5.6/dudley/src/DudleyException.h... Parsing file /build/reproducible-path/python-escript-5.6/dudley/src/DudleyException.h... Preprocessing /build/reproducible-path/python-escript-5.6/dudley/src/DudleyVersion.h... @@ -3420,19 +3536,47 @@ Parsing file /build/reproducible-path/python-escript-5.6/dudley/src/NodeFile.cpp... Preprocessing /build/reproducible-path/python-escript-5.6/dudley/src/NodeFile.h... Parsing file /build/reproducible-path/python-escript-5.6/dudley/src/NodeFile.h... -Preprocessing /build/rep))))) -(/usr/share/texlive/texmf-dist/tex/latex/oberdiek/hypcap.sty -(/usr/share/texlive/texmf-dist/tex/latex/float/float.sty)) +Preprocessing /build/rep/usr/bin/python3 scripts/py_comp.py downunder/py_src/splitminimizers.py debian/tmp3/posix/downunder/splitminimizers.pyc +Install file: "debian/tmp3/posix/downunder/mappings.pyc" as "debian/stage3/esys/downunder/mappings.pyc" -LaTeX Warning: Reference `FirstSteps' on page 19 undefined on input line 274. +No file cookbook.aux. +*geometry* driver: auto-detecting +*geometry* detected driver: pdftex +(/usr/share/texlive/texmf-dist/tex/context/base/mkii/supp-pdf.mkii +(/usr/share/texlive/texmf-dist/tex/latex/subfigure/subfigure.sty +[Loading MPS to PDF converter (version 2006.09.02).] +)/usr/bin/python3 scripts/py_comp.py downunder/py_src/splitregularizations.py debian/tmp3/posix/downunder/splitregularizations.pyc -LaTeX Warning: Reference `DIFFUSION HELM EQ 1' on page 19 undefined on input li -ne 306. +LaTeX Warning: Reference `SEC ESCRIPT DATA' on page 25 undefined on input line +228. -[19] -(/usr/share/texlive/texmf-dist/tex/latex/natbib/natbib.sty -(/usr/share/texlive/texmf-dist/tex/latex/fancyhdr/fancyhdr.sty))roducible-path/python-escript-5.6/dudley/src/NodeFile_createDenseLabelings.cpp... + +LaTeX Warning: Reference `DIFFUSION CHAP' on page 25 undefined on input line 25 +1. + +[25] +**************************************** +* Local config file subfigure.cfg used * +**************************************** +(/usr/share/texlive/texmf-dist/tex/latex/subfigure/subfigure.cfg)Install file: "debian/tmp3/posix/downunder/minimizers.pyc" as "debian/stage3/esys/downunder/minimizers.pyc" +) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/de +fs.tex (/usr/share/texlive/texmf-dist/tex/latex/epstopdf-pkg/epstopdf-base.sty) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/ve +rinfo.tex)Install file: "debian/tmp3/posix/downunder/regularizations.pyc" as "debian/stage3/esys/downunder/regularizations.pyc" + +(/usr/share/texlive/texmf-dist/tex/latex/latexconfig/epstopdf-sys.cfg)) + +LaTeX Warning: Reference `WAVE dyn 66' on page 26 undefined on input line 323. + + +LaTeX Warning: Reference `WAVE FIG 2' on page 26 undefined on input line 335. + + +LaTeX Warning: Citation `GNUPLOT' on page 26 undefined on input line 346. + +(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1pcr.fd)roducible-path/python-escript-5.6/dudley/src/NodeFile_createDenseLabelings.cpp... Parsing file /build/reproducible-path/python-escript-5.6/dudley/src/NodeFile_createDenseLabelings.cpp... Preprocessing /build/reproducible-path/python-escript-5.6/dudley/src/NodeFile_createMappings.cpp... Parsing file /build/reproducible-path/python-escript-5.6/dudley/src/NodeFile_createMappings.cpp... @@ -3476,63 +3620,97 @@ Parsing file /build/reproducible-path/python-escript-5.6/finley/src/Assemble_interpolate.cpp... Preprocessing /build/reproducible-path/python-escript-5.6/finley/src/Assemble_jacobians.cpp... Parsing file /build/reproducible-path/python-escript-5.6/finley/src/Assemble_jacobians.cpp.. -(/usr/share/texlive/texmf-dist/tex/latex/fncychap/fncychap.sty)) -(/usr/share/texlive/texmf-dist/tex/latex/cite/chapterbib.sty) -(/usr/share/texlive/texmf-dist/tex/latex/graphics/color.sty -\gdef\@extra@binfo{@-1}\@writefile{toc}{\gdef \the@ipfilectr{@-1}}\@writefile{l -of}{\gdef \the@ipfilectr{@-1}}\@writefile{lot}{\gdef \the@ipfilectr{@-1}} -\@input{elist.aux} +Writing index file inversion.idx +(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1ptm.fd) +(/usr/share/texlive/texmf-dist/tex/latex/hyperref/nameref.sty -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/eli -st.tex -(/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/color.cfg +LaTeX Warning: Citation `GNUPLOT' on page 26 undefined on input line 359. -LaTeX Warning: Reference `DIFFUSION TEMP EQ 1b' on page 20 undefined on input l -ine 318. +[26 +(/usr/share/texlive/texmf-dist/tex/latex/refcount/refcount.sty ]) +(/usr/share/texlive/texmf-dist/tex/latex/l3backend/l3backend-pdftex.def) +(/usr/share/texlive/texmf-dist/tex/generic/gettitlestring/gettitlestring.sty -[20)]) -\@input{elist.aux} +LaTeX Warning: Reference `WAVE FIG 1' on page 27 undefined on input line 365. -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/el -ist.tex (/usr/share/texlive/texmf-dist/tex/latex/listing/listing.sty -Package `listing', V1.2, <1999/05/25> -)) -\gdef\@extra@binfo{}\@writefile{toc}{\gdef \the@ipfilectr{}}\@writefile{lof}{\g -def \the@ipfilectr{}}\@writefile{lot}{\gdef \the@ipfilectr{}} -) (/usr/share/texlive/texmf-dist/tex/latex/listing/listing.sty -Package `listing', V1.2, <1999/05/25> -)) (/usr/share/texlive/texmf-dist/tex/latex/upquote/upquote.sty) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/ver -info.tex) (/usr/share/texlive/texmf-dist/tex/latex/program/program.sty -LaTeX Warning: Reference `DIFFUSION FIG 2' on page 21 undefined on input line 4 -03. +LaTeX Warning: Reference `WAVE FIG 1.2' on page 27 undefined on input line 366. + + + +LaTeX Warning: Reference `EXECUTION' on page 27 undefined on input line 369. + + +LaTeX Warning: Citation `SCIPY' on page 27 undefined on input line 396. + + +LaTeX Warning: Citation `SCIPY' on page 27 undefined on input line 398. ) -(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsa.fd) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/wave.te -x -(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsb.fd) -(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/ueur.fd) -Writing index file cookbook.idx -(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1ptm.fd)) -(/usr/share/texlive/texmf-dist/tex/latex/subfigure/subfigure.styInstall file: "dudley/src/DomainFactory.h" as "debian/stage3/include/dudley/DomainFactory.h" -Install file: "dudley/src/Dudley.h" as "debian/stage3/include/dudley/Dudley.h" +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/heatedb +lock.tex) +Underfull \vbox (badness 1655) has occurred while \output is active [27 ])/usr/bin/python3 scripts/py_comp.py dudley/py_src/__init__.py debian/tmp3/posix/dudley/py/__init__.pyc +No file inversion.aux. +*geometry* driver: auto-detecting +*geometry* detected driver: pdftex +(/usr/share/texlive/texmf-dist/tex/context/base/mkii/supp-pdf.mkii +[Loading MPS to PDF converter (version 2006.09.02).] +) -LaTeX Warning: Reference `WAVE FIG 1.2' on page 21 undefined on input line 61. +LaTeX Warning: Reference `HEATEDBLOCK general problem' on page 28 undefined on +input line 31. -[21 -(/usr/share/texlive/texmf-dist/tex/latex/l3backend/l3backend-pdftex.def ) ] -**************************************** -* Local config file subfigure.cfg used * -**************************************** -(/usr/share/texlive/texmf-dist/tex/latex/subfigure/subfigure.cfg). + +LaTeX Warning: Reference `WAVE general problem' on page 28 undefined on input l +ine 31. + + +LaTeX Warning: Reference `WAVE CHAP' on page 28 undefined on input line 32. + + +LaTeX Warning: Reference `WAVE stress' on page 28 undefined on input line 34. + + +LaTeX Warning: Reference `HEATEDBLOCK linear elastic' on page 28 undefined on i +nput line 35. + + +LaTeX Warning: Reference `HEATEDBLOCK linear elastic' on page 28 undefined on i +nput line 58. + + +LaTeX Warning: Reference `LINEARPDE.SYSTEM.1' on page 28 undefined on input lin +e 67. + + +LaTeX Warning: Reference `LINEARPDE.SYSTEM.1 TUTORIAL' on page 28 undefined on +input line 77. + + +LaTeX Warning: Reference `HEATEDBLOCK linear elastic' on page 28 undefined on i +nput line 96. + + +LaTeX Warning: Reference `LINEARPDE.SYSTEM.1 TUTORIAL' on page 28 undefined on +input line 99. + +[28] +(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1phv.fd) +(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1pcr.fd) (/usr/share/texlive/texmf-dist/tex/latex/epstopdf-pkg/epstopdf-base.sty +(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsa.fd) +(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsb.fd) +(/usr/share/texlive/texmf-dist/tex/latex/latexconfig/epstopdf-sys.cfg) [1{/var/lib/texmf/fo +nts/map/pdftex/updmap/pdftex.map)}] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/doc +guide.tex. Preprocessing /build/reproducible-path/python-escript-5.6/finley/src/Assemble_LumpedSystem.cpp... Parsing file /build/reproducible-path/python-escript-5.6/finley/src/Assemble_LumpedSystem.cpp... Preprocessing /build/reproducible-path/python-escript-5.6/finley/src/Assemble_NodeCoordinates.cpp... @@ -3577,65 +3755,55 @@ Parsing file /build/reproducible-path/python-escript-5.6/finley/src/FinleyDomain.h... Preprocessing /build/reproducible-path/python-escript-5.6/finley/src/FinleyException.h... Parsing file /build/reproducible-path/python-escript-5.6/finley/src/FinleyException.h... -Pr)Install file: "debian/tmp3/posix/downunder/splitregularizations.pyc" as "debian/stage3/esys/downunder/splitregularizations.pyc" +Pr [2 +(/usr/share/texlive/texmf-dist/tex/latex/hyperref/nameref.sty]) [3] [29 +(/usr/share/texlive/texmf-dist/tex/latex/refcount/refcount.sty [4]] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/de -fs.tex +LaTeX Warning: Reference `HEATEDBLOCK FIG 2' on page 30 undefined on input line + 179. -LaTeX Warning: Reference `WAVE natural' on page 22 undefined on input line 87. +) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/cur +rentdev.tex) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/stokesf +low.tex [5]) [6] +LaTeX Warning: Reference `GENERAL NAVIER STOKES COM' on page 30 undefined on in +put line 72. -LaTeX Warning: Reference `WAVE source' on page 22 undefined on input line 96. +LaTeX Warning: Reference `MODELS CHAPTER' on page 30 undefined on input line 77 +. -LaTeX Warning: Reference `WAVE FIG 1.1' on page 22 undefined on input line 97. +[30 ] [7] [8] +(/usr/share/texlive/texmf-dist/tex/generic/gettitlestring/gettitlestring.sty +Chapter 1. +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/int +ro.tex)) -LaTeX Warning: Reference `SEC LinearPDE' on page 22 undefined on input line 105 -. +LaTeX Warning: Reference `CHAP HEAT DIFF' on page 9 undefined on input line 77. -[22) ] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/ve -rinfo.tex)Install file: "debian/tmp3/posix/dudley/py/__init__.pyc" as "debian/stage3/esys/dudley/__init__.pyc" -Install file: "debian/tmp3/posix/downunder/splitinversioncostfunctions.pyc" as "debian/stage3/esys/downunder/splitinversioncostfunctions.pyc" -Install file: "debian/tmp3/posix/downunder/splitminimizers.pyc" as "debian/stage3/esys/downunder/splitminimizers.pyc" -Install file: "debian/tmp3/posix/downunder/seismic.pyc" as "debian/stage3/esys/downunder/seismic.pyc" -Install file: "dudley/src/DudleyDomain.h" as "debian/stage3/include/dudley/DudleyDomain.h" -Install file: "escriptcore/src/ExceptionTranslators.h" as "debian/stage3/include/escript/ExceptionTranslators.h" -Writing index file inversion.idx -(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1ptm.fd) -No file cookbook.aux. -*geometry* driver: auto-detecting -*geometry* detected driver: pdftex -(/usr/share/texlive/texmf-dist/tex/context/base/mkii/supp-pdf.mkii -LaTeX Warning: Reference `WAVE dyn 3aa' on page 23 undefined on input line 121. +LaTeX Warning: Reference `CHAP HEAT 2a' on page 9 undefined on input line 78. -[23 ] -[Loading MPS to PDF converter (version 2006.09.02).] -) -(/usr/share/texlive/texmf-dist/tex/latex/l3backend/l3backend-pdftex.def) (/usr/share/texlive/texmf-dist/tex/latex/epstopdf-pkg/epstopdf-base.sty -(/usr/share/texlive/texmf-dist/tex/latex/latexconfig/epstopdf-sys.cfg))Install file: "escriptcore/src/index.h" as "debian/stage3/include/escript/index.h" -Install file: "escriptcore/src/AbstractSystemMatrix.h" as "debian/stage3/include/escript/AbstractSystemMatrix.h" -Install file: "dudley/src/DudleyException.h" as "debian/stage3/include/dudley/DudleyException.h" -Install file: "escriptcore/src/Data.h" as "debian/stage3/include/escript/Data.h" -Install file: "escriptcore/src/DataTypes.h" as "debian/stage3/include/escript/DataTypes.h" +LaTeX Warning: Reference `CHAP HEAT 2' on page 9 undefined on input line 78. -(/usr/share/texlive/texmf-dist/tex/latex/hyperref/nameref.sty -No file inversion.aux. -*geometry* driver: auto-detecting -*geometry* detected driver: pdftex -(/usr/share/texlive/texmf-dist/tex/context/base/mkii/supp-pdf.mkii -[Loading MPS to PDF converter (version 2006.09.02).] -) +[9] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/qui +ckstart.tex +(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1phv.fd)) +(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1pcr.fd -LaTeX Warning: Reference `LUMPING' on page 24 undefined on input line 214. +LaTeX Warning: Citation `LBB' on page 31 undefined on input line 106. -[24eprocessing /build/reproducible-path/python-escript-5.6/finley/src/FinleyVersion.h... +[31) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/esc +pybas.tex] (/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1ptm.fd) [1{/var/lib/texmf/fo +nts/map/pdftex/updmap/pdftex.map}]))eprocessing /build/reproducible-path/python-escript-5.6/finley/src/FinleyVersion.h... Parsing file /build/reproducible-path/python-escript-5.6/finley/src/FinleyVersion.h... Preprocessing /build/reproducible-path/python-escript-5.6/finley/src/IndexList.cpp... Parsing file /build/reproducible-path/python-escript-5.6/finley/src/IndexList.cpp... @@ -3681,57 +3849,209 @@ Parsing file /build/reproducible-path/python-escript-5.6/finley/src/Quadrature.cpp... Preprocessing /build/reproducible-path/python-escript-5.6/finley/src/Quadrature.h... Parsing file /build/reproducible-path/python-escript-5.6/finley/src/Quadrature.h... -Preprocessing /build/ -(/usr/share/texlive/texmf-dist/tex/latex/refcount/refcount.sty]) (/usr/share/texlive/texmf-dist/tex/latex/epstopdf-pkg/epstopdf-base.sty -(/usr/share/texlive/texmf-dist/tex/latex/latexconfig/epstopdf-sys.cfg)) -(/usr/share/texlive/texmf-dist/tex/generic/gettitlestring/gettitlestring.styInstall file: "escriptcore/src/EsysMPI.h" as "debian/stage3/include/escript/EsysMPI.h" -Install file: "dudley/src/system_dep.h" as "debian/stage3/include/dudley/system_dep.h" -Install file: "dudley/src/ElementFile.h" as "debian/stage3/include/dudley/ElementFile.h" -) -(/usr/share/texlive/texmf-dist/tex/latex/hyperref/nameref.sty)Install file: "dudley/src/Util.h" as "debian/stage3/include/dudley/Util.h" -Install file: "dudley/src/NodeFile.h" as "debian/stage3/include/dudley/NodeFile.h" -Install file: "escriptcore/src/AbstractContinuousDomain.h" as "debian/stage3/include/escript/AbstractContinuousDomain.h" -Install file: "escriptcore/src/FunctionSpace.h" as "debian/stage3/include/escript/FunctionSpace.h" -Install file: "escriptcore/src/FunctionSpaceFactory.h" as "debian/stage3/include/escript/FunctionSpaceFactory.h" +Preprocessing /build/ [10 +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/do +cguide.tex [2]]) [3] +Chapter 2. -(/usr/share/texlive/texmf-dist/tex/latex/refcount/refcount.sty -(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1phv.fdInstall file: "paso/src/SystemMatrixPattern.h" as "debian/stage3/include/paso/SystemMatrixPattern.h" -)) -(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1pcr.fd)Install file: "escriptcore/src/EsysException.h" as "debian/stage3/include/escript/EsysException.h" +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/exa +mple01.tex [4] [5] [6Install file: "dudley/src/DomainFactory.h" as "debian/stage3/include/dudley/DomainFactory.h" +] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/in +tro.texInstall file: "dudley/src/Dudley.h" as "debian/stage3/include/dudley/Dudley.h" -(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsa.fd)Install file: "escriptcore/src/system_dep.h" as "debian/stage3/include/escript/system_dep.h" -Install file: "escriptcore/src/Distribution.h" as "debian/stage3/include/escript/Distribution.h" -(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsb.fd)Install file: "paso/src/Coupler.h" as "debian/stage3/include/paso/Coupler.h" +LaTeX Warning: Citation `ESCRIPT' on page 7 undefined on input line 26. -(/usr/share/texlive/texmf-dist/tex/generic/gettitlestring/gettitlestring.sty [1{/var/lib/texmf/fo -nts/map/pdftex/updmap/pdftex.map}]) -LaTeX Warning: Reference `SEC ESCRIPT DATA' on page 25 undefined on input line -228. +LaTeX Warning: Citation `ESCRIPTCOOKBOOK' on page 7 undefined on input line 27. -LaTeX Warning: Reference `DIFFUSION CHAP' on page 25 undefined on input line 25 + +LaTeX Warning: Reference `part1' on page 7 undefined on input line 30. + + +LaTeX Warning: Reference `part2' on page 7 undefined on input line 38. + +) [7] + +LaTeX Warning: Reference `fig:onedgbmodel' on page 11 undefined on input line 2 +0. + + +Underfull \vbox (badness 2698) has occurred while \output is active [11pdfTeX w +arning (ext4): destination with the same identifier (name{figure.2.1}) has been + already used, duplicate ignored + ...shipout:D \box_use:N \l_shipout_box + +l.47 \end{equation} + ] [8]Install file: "debian/tmp3/posix/dudley/py/__init__.pyc" as "debian/stage3/esys/dudley/__init__.pyc" +Install file: "debian/tmp3/posix/downunder/splitinversioncostfunctions.pyc" as "debian/stage3/esys/downunder/splitinversioncostfunctions.pyc" + [9Install file: "debian/tmp3/posix/downunder/seismic.pyc" as "debian/stage3/esys/downunder/seismic.pyc" +] [10]Install file: "debian/tmp3/posix/downunder/splitminimizers.pyc" as "debian/stage3/esys/downunder/splitminimizers.pyc" + + +LaTeX Warning: Reference `eqn:hd' on page 12 undefined on input line 55. + + +LaTeX Warning: Reference `eqn:hd' on page 12 undefined on input line 59. + + +LaTeX Warning: Reference `eqn:hd' on page 12 undefined on input line 66. + + +LaTeX Warning: Reference `eqn:hd' on page 12 undefined on input line 70. + + +LaTeX Warning: Reference `eqn:hd' on page 12 undefined on input line 76. + + +LaTeX Warning: Reference `eqn:Tbeuler' on page 12 undefined on input line 102. + + +LaTeX Warning: Reference `eqn:hd' on page 12 undefined on input line 102. + + +LaTeX Warning: Reference `eqn:beuler' on page 12 undefined on input line 125. + + +LaTeX Warning: Reference `eqn:hddisc' on page 12 undefined on input line 132. + +[12Install file: "debian/tmp3/posix/downunder/splitregularizations.pyc" as "debian/stage3/esys/downunder/splitregularizations.pyc" + +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Co +okGravity.tex]Install file: "dudley/src/DudleyDomain.h" as "debian/stage3/include/dudley/DudleyDomain.h" + + +LaTeX Warning: Reference `eqn:commonform nabla' on page 13 undefined on input l +ine 153. + + +LaTeX Warning: Reference `eqn:hddisc' on page 13 undefined on input line 158. + + +LaTeX Warning: Reference `eqn:hddisc' on page 13 undefined on input line 159. + + +LaTeX Warning: Reference `eqn:commonform nabla' on page 13 undefined on input l +ine 165. + + +LaTeX Warning: Reference `eqn:hdgenf' on page 13 undefined on input line 171. + + +LaTeX Warning: Reference `eqn:commonform' on page 13 undefined on input line 17 1. -[25)] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/doc -guide.tex [2]) [3 -(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1phv.fd]) [4] -(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1pcr.fd) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/cur -rentdev.tex [5]) [6] [1{/var/lib/texmf/fo -nts/map/pdftex/updmap/pdftex.map -LaTeX Warning: Reference `WAVE dyn 66' on page 26 undefined on input line 323. +Underfull \hbox (badness 4353) in paragraph at lines 185--185 +[][]\OT1/ptm/m/n/8 More in-for-ma-tion on Bound-ary Con-di-tions is avail-able +at Wikipedia [][]$\OT1/pcr/m/n/8 http : / / en . wikipedia . org / wiki / Bound +ary _ +LaTeX Warning: Reference `Sec:1DHDv0' on page 13 undefined on input line 191. -LaTeX Warning: Reference `WAVE FIG 2' on page 26 undefined on input line 335. + +LaTeX Warning: Reference `NEUMAN 1' on page 13 undefined on input line 217. -LaTeX Warning: Citation `GNUPLOT' on page 26 undefined on input line 346. +LaTeX Warning: Reference `eqn:hdgenf' on page 13 undefined on input line 220. + + +LaTeX Warning: Reference `eqn:hdgenf' on page 13 undefined on input line 221. + +[13 + +LaTeX Warning: Reference `FLUID OUTPUT' on page 32 undefined on input line 218. + + +)] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/slip.te +xInstall file: "escriptcore/src/ExceptionTranslators.h" as "debian/stage3/include/escript/ExceptionTranslators.h" + + +LaTeX Warning: Reference `fig:slip.1' on page 32 undefined on input line 28. + +[32] +Chapter 1. + +LaTeX Warning: Reference `part2' on page 11 undefined on input line 12. + + +LaTeX Warning: Reference `Chp:cook:magnetic inversion' on page 11 undefined on +input line 32. + + +LaTeX Warning: Reference `Chp:cook:joint inversion' on page 11 undefined on inp +ut line 32. + + +Underfull \hbox (badness 10000) in paragraph at lines 54--54 +[]\OT1/ptm/m/n/10 Figure 1.1: Grav-ity Anomaly Data in $\OML/cmm/m/it/10 mgal$ +\OT1/ptm/m/n/10 from West-ern Queens-land, Aus-tralia (file + +Underfull \hbox (badness 10000) in paragraph at lines 65--65 +[]\OT1/ptm/m/n/10 Figure 1.2: 3-D con-tour plot of the den-sity dis-tri-bu-tion + ob-tained by in-ver-sion of file + +LaTeX Warning: Citation `ESCRIPTCOOKBOOK' on page 11 undefined on input line 76 +. + + +LaTeX Warning: Citation `ESCRIPT' on page 11 undefined on input line 77. + + +LaTeX Warning: Reference `code: gravity1' on page 11 undefined on input line 82 +. + +[11 + +LaTeX Warning: Reference `ELASTIC CHAP' on page 33 undefined on input line 50. + + +LaTeX Warning: Reference `Slip stress' on page 33 undefined on input line 63. + +[33 ...shipout:D \box_use:N \l_shipout_box + +l.313 T + here are various ways to construct domain objects. The simplest form ... + ]reproducible-path/python-escript-5.6/finley/src/ReferenceElements.cpp... Parsing file /build/reproducible-path/python-escript-5.6/finley/src/ReferenceElements.cpp... Preprocessing /build/reproducible-path/python-escript-5.6/finley/src/ReferenceElements.h... Parsing file /build/reproducible-path/python-escript-5.6/finley/src/ReferenceElements.h... @@ -3780,114 +4100,83 @@ Preprocessing /build/reproducible-path/python-escript-5.6/paso/src/MKL.h... Parsing file /build/reproducible-path/python-escript-5.6/paso/src/MKL.h... Preprocessing /build/reproducible-path/python-escript-5.6/paso/src/mmio.cpp... -Parsing file /build/reproducible-path/pyth - -LaTeX Warning: Citation `GNUPLOT' on page 26 undefined on input line 359. - -[26 -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/do -cguide.tex -Chapter 1. - -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/int -ro.tex ]]) [3] [4] - -LaTeX Warning: Reference `CHAP HEAT DIFF' on page 9 undefined on input line 77. - +Parsing file /build/reproducible-path/pyth)Install file: "escriptcore/src/index.h" as "debian/stage3/include/escript/index.h" -LaTeX Warning: Reference `CHAP HEAT 2a' on page 9 undefined on input line 78. - - -LaTeX Warning: Reference `CHAP HEAT 2' on page 9 undefined on input line 78. - -[9] [5] [6] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/qui -ckstart.tex - -LaTeX Warning: Reference `WAVE FIG 1' on page 27 undefined on input line 365. - - -LaTeX Warning: Reference `WAVE FIG 1.2' on page 27 undefined on input line 366. - - - -LaTeX Warning: Reference `EXECUTION' on page 27 undefined on input line 369. - - -LaTeX Warning: Citation `SCIPY' on page 27 undefined on input line 396. - +LaTeX Warning: Reference `Slip stress split' on page 34 undefined on input line + 85. -LaTeX Warning: Citation `SCIPY' on page 27 undefined on input line 398. -)) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/in -tro.tex -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/heatedb -lock.tex -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/esc -pybas.tex +LaTeX Warning: Reference `Slip general problem' on page 34 undefined on input l +ine 85. -LaTeX Warning: Citation `ESCRIPT' on page 7 undefined on input line 26. +LaTeX Warning: Reference `Slip stress split 1' on page 34 undefined on input li +ne 90. -LaTeX Warning: Citation `ESCRIPTCOOKBOOK' on page 7 undefined on input line 27. +LaTeX Warning: Reference `Slip constraint' on page 34 undefined on input line 9 +2. -LaTeX Warning: Reference `part1' on page 7 undefined on input line 30. +LaTeX Warning: Reference `Slip natural fault' on page 34 undefined on input lin +e 92. -LaTeX Warning: Reference `part2' on page 7 undefined on input line 38. +LaTeX Warning: Reference `ELASTIC CHAP' on page 34 undefined on input line 94. -) -Underfull \vbox (badness 1655) has occurred while \output is active [27 [7 (/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1ptm.fd )]] [8] [9] [10] -LaTeX Warning: Reference `HEATEDBLOCK general problem' on page 28 undefined on -input line 31. +LaTeX Warning: Reference `Fault System' on page 34 undefined on input line 97. +[34 Install file: "escriptcore/src/Data.h" as "debian/stage3/include/escript/Data.h" +]Install file: "escriptcore/src/AbstractSystemMatrix.h" as "debian/stage3/include/escript/AbstractSystemMatrix.h" +Install file: "dudley/src/DudleyException.h" as "debian/stage3/include/dudley/DudleyException.h" +>] [15pdfTeX warning (ext4): destination with the same identi +fier (name{figure.2.3}) has been already used, duplicate ignored + ...shipout:D \box_use:N \l_shipout_box + +l.313 T + here are various ways to construct domain objects. The simplest form ... + ] [12 ...shipout:D \box_use:N \l_shipout_box - -l.47 \end{equation} - ] -Chapter 1. - -LaTeX Warning: Reference `part2' on page 11 undefined on input line 12. - - -LaTeX Warning: Reference `Chp:cook:magnetic inversion' on page 11 undefined on -input line 32. - - -LaTeX Warning: Reference `Chp:cook:joint inversion' on page 11 undefined on inp -ut line 32. - - -Underfull \hbox (badness 10000) in paragraph at lines 54--54 -[]\OT1/ptm/m/n/10 Figure 1.1: Grav-ity Anomaly Data in $\OML/cmm/m/it/10 mgal$ -\OT1/ptm/m/n/10 from West-ern Queens-land, Aus-tralia (file - -Underfull \hbox (badness 10000) in paragraph at lines 65--65 -[]\OT1/ptm/m/n/10 Figure 1.2: 3-D con-tour plot of the den-sity dis-tri-bu-tion - ob-tained by in-ver-sion of file - -LaTeX Warning: Citation `ESCRIPTCOOKBOOK' on page 11 undefined on input line 76 -. - -LaTeX Warning: Citation `ESCRIPT' on page 11 undefined on input line 77. - - -LaTeX Warning: Reference `code: gravity1' on page 11 undefined on input line 82 -. +LaTeX Warning: Reference `eqn:hdgenf' on page 17 undefined on input line 420. -[11 [29] +(/usr/share/texlive/texmf-dist/tex/latex/listings/lstlang1.sty [35]) -LaTeX Warning: Reference `HEATEDBLOCK FIG 2' on page 30 undefined on input line - 179. +LaTeX Warning: Reference `fig:slip.2' on page 36 undefined on input line 190. ) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/dirac.t +ex -LaTeX Warning: Reference `eqn:hd' on page 12 undefined on input line 55. - - -LaTeX Warning: Reference `eqn:hd' on page 12 undefined on input line 59. - - -LaTeX Warning: Reference `eqn:hd' on page 12 undefined on input line 66. - - -LaTeX Warning: Reference `eqn:hd' on page 12 undefined on input line 70. - - -LaTeX Warning: Reference `eqn:hd' on page 12 undefined on input line 76. - - -LaTeX Warning: Reference `eqn:Tbeuler' on page 12 undefined on input line 102. - - -LaTeX Warning: Reference `eqn:hd' on page 12 undefined on input line 102. - - -LaTeX Warning: Reference `eqn:beuler' on page 12 undefined on input line 125. - - -LaTeX Warning: Reference `eqn:hddisc' on page 12 undefined on input line 132. - -[12]] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/stokesf -low.tex (/usr/share/texlive/texmf-dist/tex/latex/listings/lstlang1.sty - -LaTeX Warning: Reference `GENERAL NAVIER STOKES COM' on page 30 undefined on in -put line 72. - - -LaTeX Warning: Reference `MODELS CHAPTER' on page 30 undefined on input line 77 -. - -[30 ] - -LaTeX Warning: Reference `eqn:commonform nabla' on page 13 undefined on input l -ine 153. - - -LaTeX Warning: Reference `eqn:hddisc' on page 13 undefined on input line 158. - - -LaTeX Warning: Reference `eqn:hddisc' on page 13 undefined on input line 159. - - -LaTeX Warning: Reference `eqn:commonform nabla' on page 13 undefined on input l -ine 165. - - -LaTeX Warning: Reference `eqn:hdgenf' on page 13 undefined on input line 171. - - -LaTeX Warning: Reference `eqn:commonform' on page 13 undefined on input line 17 -1. - - -Underfull \hbox (badness 4353) in paragraph at lines 185--185 -[][]\OT1/ptm/m/n/8 More in-for-ma-tion on Bound-ary Con-di-tions is avail-able -at Wikipedia [][]$\OT1/pcr/m/n/8 http : / / en . wikipedia . org / wiki / Bound -ary _ - -LaTeX Warning: Reference `Sec:1DHDv0' on page 13 undefined on input line 191. - - -LaTeX Warning: Reference `NEUMAN 1' on page 13 undefined on input line 217. - - -LaTeX Warning: Reference `eqn:hdgenf' on page 13 undefined on input line 220. - - -LaTeX Warning: Reference `eqn:hdgenf' on page 13 undefined on input line 221. +LaTeX Warning: Reference `EX:DIRAC1' on page 36 undefined on input line 47. -[13])6/paso/src/Smoother.cpp... +[36 ...shipout:D \box_use:N \l_shipout_box - -l.313 T - here are various ways to construct domain objects. The simplest form ... - ] [15pdfTeX warning (ext4): destination with the same identi -fier (name{figure.2.3}) has been already used, duplicate ignored - ...shipout:D \box_use:N \l_shipout_box - -l.313 T - here are various ways to construct domain objects. The simplest form ... - ] - -LaTeX Warning: Reference `fig:fs' on page 16 undefined on input line 317. - +[17] -LaTeX Warning: Reference `fig:fs' on page 16 undefined on input line 333. +LaTeX Warning: Reference `ss:domcon' on page 18 undefined on input line 508. +[18] +Underfull \hbox (badness 10000) in paragraph at lines 604--605 -LaTeX Warning: Reference `fig:fs' on page 16 undefined on input line 354. +Underfull \hbox (badness 10000) in paragraph at lines 604--605 -LaTeX Warning: Reference `STEADY-STATE HEAT REFRACTION' on page 16 undefined on - input line 383. +LaTeX Warning: Reference `Sec:2DHD' on page 19 undefined on input line 617. -LaTeX Warning: Reference `eqn:commonform nabla' on page 16 undefined on input l -ine 389. +[19]>]mkdir: cannot create directory '././nonexistent': Permission denied + [13 ] +LaTeX Warning: Citation `ESCRIPT' on page 14 undefined on input line 138. -LaTeX Warning: Reference `eqn:commonform nabla' on page 16 undefined on input l -ine 391. +LaTeX Warning: Reference `FIG:P1:GRAV:1' on page 14 undefined on input line 152 +. -LaTeX Warning: Reference `eqn:commonform nabla' on page 16 undefined on input l -ine 394. +LaTeX Warning: Reference `FIG:P1:GRAV:0' on page 14 undefined on input line 154 +. -LaTeX Warning: Reference `eqn:commonform2D' on page 16 undefined on input line -406. +LaTeX Warning: Reference `SEC:P1:GRAV:DATA' on page 14 undefined on input line +155. -LaTeX Warning: Reference `eqn:commonform' on page 16 undefined on input line 40 -7. -[16] +LaTeX Warning: Reference `code: gravity1' on page 14 undefined on input line 18 +5. -LaTeX Warning: Reference `eqn:hdgenf' on page 17 undefined on input line 420. -(/usr/share/texlive/texmf-dist/tex/latex/listings/lstlang1.sty +LaTeX Warning: Reference `FIG:P1:GRAV:2' on page 14 undefined on input line 188 +. -LaTeX Warning: Reference `FLUID OUTPUT' on page 32 undefined on input line 218. +LaTeX Warning: Reference `fig:domainBuilder' on page 14 undefined on input line + 189. -) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/slip.te -x -LaTeX Warning: Reference `fig:slip.1' on page 32 undefined on input line 28. +LaTeX Warning: Reference `FIG:P1:GRAV:3' on page 14 undefined on input line 217 +. -[32)] -LaTeX Warning: Reference `ELASTIC CHAP' on page 33 undefined on input line 50. +LaTeX Warning: Reference `sec:forward gravity' on page 14 undefined on input li +ne 226. +[14] -LaTeX Warning: Reference `Slip stress' on page 33 undefined on input line 63. +LaTeX Warning: Reference `fig:onedheatout1' on page 20 undefined on input line +671. -[33 ]mktexpk: Running mf-nowin -progname=mf \mode:=ljfour; mag:=1+0/600; nonstopmode; input tctt1000 -This is METAFONT, Version 2.7182818 (TeX Live 2020/Debian) (preloaded base=mf) +[20pdfTeX warning (ext4): destination with the same identifier (name{figure.2.4 +}) has been already used, duplicate ignored + ...shipout:D \box_use:N \l_shipout_box + +l.680 \clearpage + ] -LaTeX Warning: Reference `Slip stress split' on page 34 undefined on input line - 85. +LaTeX Warning: Reference `code: gravity1' on page 16 undefined on input line 23 +5. -LaTeX Warning: Reference `Slip general problem' on page 34 undefined on input l -ine 85. +LaTeX Warning: Citation `ESCRIPT' on page 16 undefined on input line 278. -LaTeX Warning: Reference `Slip stress split 1' on page 34 undefined on input li -ne 90. +LaTeX Warning: Citation `ESCRIPTONLINE' on page 16 undefined on input line 278. -LaTeX Warning: Reference `Slip constraint' on page 34 undefined on input line 9 -2. +LaTeX Warning: Citation `Telford1990a' on page 16 undefined on input line 282. -LaTeX Warning: Reference `Slip natural fault' on page 34 undefined on input lin -e 92. +(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1ptm.fd) +LaTeX Warning: Citation `Telford1990a' on page 16 undefined on input line 290. -LaTeX Warning: Reference `ELASTIC CHAP' on page 34 undefined on input line 94. +LaTeX Warning: Reference `FIG:P1:GRAV:2' on page 16 undefined on input line 294 +. -LaTeX Warning: Reference `Fault System' on page 34 undefined on input line 97. -[34 (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txaccent.mf ] - Ok [0] [1] [2] -Underfull \hbox (badness 10000) in paragraph at lines 415--425 +LaTeX Warning: Reference `FIG:P1:GRAV:0' on page 16 undefined on input line 299 +. -[17 [3] [4] [5] [6]] [7] [8] [9] [10] [11] [12] [27] [29]) -(/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txgen.mf - Ok [100] [109] [98] [99] [108]) -(/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txsymbol.mf - Ok [13] [18] [21] [22] [23] [24] [25] [26] [28] [31] [32] [36] [39] [44] -[45] [46] [42] [47] [60] [61] [62] [77] [79] [87] [110] [91] [93] [94] [95] -[96] [126] [127] [128] [129] [130] [131] [132] [133] [134] [135] [136] [137] -[138] [139] [140] [141] [142]mMatrixPattern.cpp... +[16]mMatrixPattern.cpp... Parsing file /build/reproducible-path/python-escript-5.6/paso/src/SystemMatrixPattern.cpp... Preprocessing /build/reproducible-path/python-escript-5.6/paso/src/SystemMatrixPattern.h... Parsing file /build/reproducible-path/python-escript-5.6/paso/src/SystemMatrixPattern.h... @@ -4319,115 +4430,7 @@ Preprocessing /build/reproducible-path/python-escript-5.6/ripley/src/domainhelpers.h... Parsing file /build/reproducible-path/python-escript-5.6/ripley/src/domainhelpers.h... Preprocessing /build/reproducible-path/python-escript-5.6/ripley/src/LameAssembler2D.cpp... -Parsing f [143] [144] [145] [146] [147] [148] [149] -[150] [151] [152] [153] [154] [155] [156] [157] [158] [159] [160] [161] [35 -[162] [163] [164]] [165] [166] [167] [168] [169] [171] [172] [173] [174] -[175] [177] [176] [180] [181] [182] [183] [184] [187] [191] [214] [246]) -(/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txromod.mf - Ok [48] [49] - -LaTeX Warning: Reference `fig:slip.2' on page 36 undefined on input line 190. - -) [50] [51] [52] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/dirac.t -ex [53] [54] [55] [56] [57]) -(/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txrsuper.mf - Ok [185] [178] [179] [170] [186]) -(/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txrfract.mf - Ok [188] [189] - -LaTeX Warning: Reference `ss:domcon' on page 18 undefined on input line 508. - -[18 [190]) ) ) ) -Font metrics written on tctt1000.tfm. -Output written on tctt1000.600gf (128 characters, 19540 bytes). -Transcript written on tctt1000.log. -]>] [13 ] - -LaTeX Warning: Reference `EX:DIRAC1' on page 36 undefined on input line 47. - -[36 ] - -LaTeX Warning: Reference `code: gravity1' on page 16 undefined on input line 23 -5. - - -LaTeX Warning: Citation `ESCRIPT' on page 16 undefined on input line 278. - - -LaTeX Warning: Citation `ESCRIPTONLINE' on page 16 undefined on input line 278. - - - -LaTeX Warning: Citation `Telford1990a' on page 16 undefined on input line 282. - -(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1ptm.fd) - -LaTeX Warning: Citation `Telford1990a' on page 16 undefined on input line 290. - - -LaTeX Warning: Reference `FIG:P1:GRAV:2' on page 16 undefined on input line 294 -. - - -LaTeX Warning: Reference `FIG:P1:GRAV:0' on page 16 undefined on input line 299 -. - -[16] +Parsing f LaTeX Warning: Reference `SEC:P1:GRAV:REMARK:DATAHOLES' on page 17 undefined on input line 324. @@ -4465,19 +4468,7 @@ LaTeX Warning: Reference `SEC:P1:GRAV:REMARK:MULTIDATA' on page 17 undefined on input line 416. -[17]mktexpk: /tmp/texfonts/pk/ljfour/jknappen/ec/tctt1000.600pk: successfully generated. - - -LaTeX Warning: Reference `fig:onedheatout1' on page 20 undefined on input line -671. - -[20pdfTeX warning (ext4): destination with the same identifier (name{figure.2.4 -}) has been already used, duplicate ignored - ...shipout:D \box_use:N \l_shipout_box - -l.680 \clearpage - ]{/usr/share/texlive/texmf-dist/fonts/enc/dvips/base/8 -r.enc} - -Output written on install.pdf (28 pages, 167196 bytes). -Transcript written on install.log. -ile /build/reproducible-path/python-escript-5.6/ripley/src/LameAssembler2D.cpp... -Preprocessing /build/reproducible-path/python-escript-5.6/ripley/src/LameAssembler2D.h... -Parsing file /build/reproducible-path/python-escript-5.6/ripley/src/LameAssembler2D.h... -Preprocessing /build/reproducible-path/python-escript-5.6/ripley/src/LameAssembler3D.cpp... -Parsing file /build/reproducible-path/python-escript-5.6/ripley/src/LameAssembler3D.cpp... -Preprocessing /build/reproducible-path/python-escript-5.6/ripley/src/LameAssembler3D.h... -Parsing file /build/reproducible-path/python-escript-5.6/ripley/src/LameAssembler3D.h... -Preprocessing /build/reproducible-path/python-escript-5.6/ripley/src/MultiBrick.cpp... -Parsing file /build/reproducible-path/python-escript-5.6/ripley/src/MultiBrick.cpp... -Preprocessing /build/reproducible-path/python-escript-5.6/ripley/src/MultiBrick.h... -Parsing file /build/reproducible-path/python-escript-5.6/ripley/src/MultiBrick.h... -Preprocessing /build/reproducible-path/python-escript-5.6/ripley/src/MultiRectangle.cpp... -Parsing file /build/reproducible-path/python-escript-5.6/ripley/src/MultiRectangle.cpp... -Preprocessing /build/reproducible-path/python-escript-5.6/ripley/src/MultiRectangle.h... -Parsing file /build/reproducible-path/python-escript-5.6/ripley/src/MultiRectangle.h... -Preprocessing /build/reproducible-path/python-escript-5.6/ripley/src/Rectangle.cpp... -Parsing file /build/reproducible-path/python-escript-5.6/ripley/src/Rectangle.cpp... -Preprocessing /build/reproducible-path/python-escript-5.6/ripley/src/Rectangle.h... -Parsing file /build/reproducible-path/python-escript-5.6/ripley/src/Rectangle.h... -Preprocessing /build/reproducible-path/python-escript-5.6/ripley/src/Ripley.h... -Parsing file /build/reproducible-path/python-escript-5.6/ripley/src/Ripley.h... -Preprocessing /build/reproducible-path/python-escript-5.6/ripley/src/ripleycpp.cpp... -Parsing file /build/reproducible-path/python-escript-5.6/ripley/src/ripleycpp.cpp... -Preprocessing /build/reproducible-path/python-escript-5.6/ripley/src/RipleyDomain.cpp... -Parsing file /build/reproducible-path/python-escript-5.6/ripley/src/RipleyDomain.cpp... -Preprocessing /build/reproducible-path/python-escript-5.6/ripley/src/RipleyDomain.h... -Parsing file /build/reproducible-path/python-escript-5.6/ripley/src/RipleyDomain.h... -Preprocessing /build/reproducible-path/python-escript-5.6/ripley/src/RipleyException.h... -Parsing file /build/reproducible-path/python-escript-5.6/ripley/src/RipleyException.h... -Preprocessing /build/reproducible-path/python-escript-5.6/ripley/src/RipleySystemMatrix.h... -Parsing file /build/reproducible-path/python-escript-5.6/ripley/src/RipleySystemMatrix.h... -Preprocessing /build/reproducible-path/python-escript-5.6/ripley/src/system_dep.h... -Parsing file /build/reproducible-path/python-escript-5.6/ripley/src/system_dep.h... -Preprocessing /build/reproducible-path/python-escript-5.6/ripley/src/WaveAssembler2D.cpp... -Parsing file /build/reproducible-path/python-escript-5.6/ripley/src/WaveAssembler2D.cpp... -Preprocessing /build/reproducible-path/python-escript-5.6/ripley/src/WaveAssembler2D.h... -Parsing file /build/reproducible-path/python-escript-5.6/ripley/src/WaveAssembler2D.h... -Preprocessing /build/reproducible-path/python-escript-5.6/ripley/src/WaveAssembler3D.cpp... -Parsing file /build/reproducible-path/python-escript-5.6/ripley/src/WaveAssembler3D.cpp... -Preprocessing /build/reproducible-path/python-escript-5.6/ripley/src/WaveAssembler3D.h... -Parsing file /build/reproducible-path/python-escript-5.6/ripley/src/WaveAssembler3D.h... -Preprocessing /build/reproducible-path/python-escript-5.6/speckley/src/AbstractAssembler.cpp... -Parsing file /build/reproducible-path/python-escript-5.6/speckley/src/AbstractAssembler.cpp... -Preprocessing /build/reproducible-path/python-escript-5.6/speckley/src/AbstractAssembler.h... -Parsing file /build/reproducible-path/python-escript-5.6/speckley/src/AbstractAssembler.h... -Preprocessing /build/reproducible-path/python-escript-5.6/speckley/src/Brick.cpp... -Parsing file /build/reproducible-p>]cd debian/tmp3/posix/doc/install && makeindex install.idx +[18]>]mktexpk: Running mf-nowin -progname=mf \mode:=ljfour; mag:=1+0/600; nonstopmode; input tctt1000 LaTeX Warning: Reference `code: gravity1' on page 19 undefined on input line 50 @@ -4619,19 +4536,28 @@ ersion/figures//QLDGravContourMu01.png (PNG copy)> ] [21 ]] [21 ]Install file: "escriptcore/src/Pointers.h" as "debian/stage3/include/escript/Pointers.h" -Install file: "escriptcore/src/SystemMatrixException.h" as "debian/stage3/include/escript/SystemMatrixException.h" -Install file: "escriptcore/src/DataAbstract.h" as "debian/stage3/include/escript/DataAbstract.h" - +vDepthMu100.png (PNG copy)pdfTeX warning (ext4): destination with the same identifier (name{figur +e.2.5}) has been already used, duplicate ignored + ...shipout:D \box_use:N \l_shipout_box + +l.776 \clearpage + ] LaTeX Warning: Reference `SEC:P1:GRAV:DATA' on page 22 undefined on input line 647. @@ -4653,24 +4579,89 @@ input line 680. [22 [181]] [182] [183] [184] [187] [191] [214] [246]) +(/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txromod.mf + Ok [48] [49] [50] -LaTeX Warning: Float too large for page by 10.55325pt on input line 775. +LaTeX Warning: Reference `part2' on page 23 undefined on input line 751. -[21] [22pdfTeX warning (ext4): destination with the same identifier (name{figur -e.2.5}) has been already used, duplicate ignored - ...shipout:D \box_use:N \l_shipout_box - -l.776 \clearpage - ]/build/reproducible-path/python-escript-5.6/escriptcore/src/ArrayOps.h:41: warning: the name 'LocalOps.h' supplied as the argument in the \file statement is not an input file +Preprocessing /build/reproducible-path/python-escript-5.6/weip/build/reproducible-path/python-escript-5.6/escriptcore/src/ArrayOps.h:41: warning: the name 'LocalOps.h' supplied as the argument in the \file statement is not an input file /build/reproducible-path/python-escript-5.6/escriptcore/src/system_dep.h:20: warning: the name 'escript/src/system_dep.h' supplied as the argument in the \file statement is not an input file - - -LaTeX Warning: Reference `part2' on page 23 undefined on input line 751. - -)Install file: "paso/src/PasoException.h" as "debian/stage3/include/paso/PasoException.h" - [23]Install file: "paso/src/SharedComponents.h" as "debian/stage3/include/paso/SharedComponents.h" - -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Co -okMagnetic.texInstall file: "escriptcore/src/AbstractDomain.h" as "debian/stage3/include/escript/AbstractDomain.h" - [24]Install file: "escriptcore/src/DataVector.h" as "debian/stage3/include/escript/DataVector.h" -entering extended mode -LaTeX2e <2020-10-01> patch level 4 -L3 programming layer <2021-01-09> xparse <2020-03-03> -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/inst -all.tex -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/esys -doc.cls -Chapter 2. - -Underfull \hbox (badness 10000) in paragraph at lines 7--7 -[]\OT1/ptm/m/n/10 Figure 2.1: Mag-netic anomaly data in $\OML/cmm/m/it/10 nT$ \ -OT1/ptm/m/n/10 from West-ern Queens-land, Aus-tralia (file - -LaTeX Warning: Reference `FIG:P1:MAG:0' on page 25 undefined on input line 15. - - -LaTeX Warning: Reference `code: magnetic1' on page 25 undefined on input line 1 -9. - - -LaTeX Warning: Reference `code: gravity1' on page 25 undefined on input line 20 -. - - -LaTeX Warning: Reference `FIG:P1:MAG:1' on page 25 undefined on input line 76. - -[25] [26 ] -(/usr/share/texlive/texmf-dist/tex/latex/listings/lstmisc.sty) -(/usr/share/texlive/texmf-dist/tex/latex/listings/listings.cfg)) -(/usr/share/texlive/texmf-dist/tex/generic/iftex/ifpdf.sty) -(/usr/share/texlive/texmf-dist/tex/latex/base/makeidx.sty) -(/usr/share/texlive/texmf-dist/tex/latex/url/url.sty) +>] Overfull \hbox (3.76056pt too wide) in paragraph at lines 797--798 [][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][ ][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][] @@ -4844,11 +4808,7 @@ ) (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/exa -mple02.tex -(/usr/share/texlive/texmf-dist/tex/latex/tools/xspace.sty)> ] -(/usr/share/texlive/texmf-dist/tex/latex/graphics/graphicx.sty +mple02.tex>] Underfull \hbox (badness 10000) in paragraph at lines 17--19 @@ -4859,22 +4819,13 @@ LaTeX Warning: Reference `Sec:1DHDv00' on page 23 undefined on input line 34. [23] -(/usr/share/texlive/texmf-dist/tex/latex/graphics/graphics.sty -(/usr/share/texlive/texmf-dist/tex/latex/graphics/trig.sty) -(/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/graphics.cfg) -(/usr/share/texlive/texmf-dist/tex/latex/graphics-def/pdftex.def))) -(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsmath.sty/build/reproducible-path/python-escript-5.6/escriptcore/src/Data.cpp:4694: warning: no matching class member found for - DataTypes::CplxVectorType::reference Data::getDataAtOffsetRW(DataTypes::RealVectorType::size_type i, std::complex< real_t > dummy) -Possible candidates: - 'DataTypes::RealVectorType::reference escript::Data::getDataAtOffsetRW(DataTypes::RealVectorType::size_type i, DataTypes::real_t dummy)' - 'DataTypes::CplxVectorType::reference escript::Data::getDataAtOffsetRW(DataTypes::CplxVectorType::size_type i, DataTypes::cplx_t dummy)' -/build/reproducible-path/python-escript-5.6/escriptcore/src/Data.cpp:4702: warning: no matching class member found for - DataTypes::CplxVectorType::const_reference Data::getDataAtOffsetRO(DataTypes::RealVectorType::size_type i, std::complex< real_t > dummy) -Possible candidates: - 'DataTypes::RealVectorType::const_reference escript::Data::getDataAtOffsetRO(DataTypes::RealVectorType::size_type i, DataTypes::real_t dummy)' - 'DataTypes::CplxVectorType::const_reference escript::Data::getDataAtOffsetRO(DataTypes::CplxVectorType::size_type i, DataTypes::cplx_t dummy)' +LaTeX Warning: Reference `FIG:EX:DIRAC' on page 37 undefined on input line 75. +)) [37 ]mktexpk: /tmp/texfonts/pk/ljfour/jknappen/ec/tctt1000.600pk: successfully generated. LaTeX Warning: Reference `eqn:hddisc' on page 24 undefined on input line 71. @@ -4883,20 +4834,7 @@ LaTeX Warning: Reference `SEC BOUNDARY COND' on page 24 undefined on input line 73. -[24/build/reproducible-path/python-escript-5.6/escriptcore/src/Data.cpp:5664: warning: documented symbol 'Data escript::condEvalWorker' was not declared or defined. -/build/reproducible-path/python-escript-5.6/escriptcore/src/Data.h:1973: warning: no uniquely matching class member found for - DataTypes::cplx_t * escript::Data::getSampleDataRW(DataTypes::CplxVectorType::size_type sampleNo, DataTypes::cplx_t dummy) -Possible candidates: - 'DataTypes::real_t * escript::Data::getSampleDataRW(DataTypes::RealVectorType::size_type sampleNo, DataTypes::real_t dummy=0)' at line 625 of file /build/reproducible-path/python-escript-5.6/escriptcore/src/Data.h - 'DataTypes::cplx_t * escript::Data::getSampleDataRW(DataTypes::RealVectorType::size_type sampleNo, DataTypes::cplx_t dummy)' at line 628 of file /build/reproducible-path/python-escript-5.6/escriptcore/src/Data.h - -/build/reproducible-path/python-escript-5.6/escriptcore/src/Data.h:2005: warning: no uniquely matching class member found for - const DataTypes::cplx_t * escript::Data::getSampleDataRO(DataTypes::RealVectorType::size_type sampleNo, std::complex< real_t > dummy) const -Possible candidates: - 'const DataTypes::real_t * escript::Data::getSampleDataRO(DataTypes::RealVectorType::size_type sampleNo, DataTypes::real_t dummy=0) const' at line 611 of file /build/reproducible-path/python-escript-5.6/escriptcore/src/Data.h - 'const DataTypes::cplx_t * escript::Data::getSampleDataRO(DataTypes::CplxVectorType::size_type sampleNo, DataTypes::cplx_t dummy) const' at line 614 of file /build/reproducible-path/python-escript-5.6/escriptcore/src/Data.h - -pdfTeX warning (ext4): destination with the same identifier (name{figure.2.6 +[24pdfTeX warning (ext4): destination with the same identifier (name{figure.2.6 }) has been already used, duplicate ignored ...shipout:D \box_use:N \l_shipout_box @@ -4904,10 +4842,42 @@ t is important to remark here that if a Dirichlet boundary condition is ] -For additional information on amsmath, use the `?' option. -(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amstext.sty -(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsgen.sty)) -(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsbsy.sty + +LaTeX Warning: Reference `fig:onedheatout1 002' on page 25 undefined on input l +ine 116. + + +LaTeX Warning: Reference `fig:onedheatout 002' on page 25 undefined on input li +ne 119. + + +LaTeX Warning: Float too large for page by 10.55325pt on input line 146. + +) [25pdfTeX warning (ext4): destination with the same identifier (name{figure.2 +.7}) has been already used, duplicate ignored + ...shipout:D \box_use:N \l_shipout_box + +l.108 \chapter + {Heat Diffusion in Two Dimensions} {/usr/share/texlive/texmf-dist/fonts/enc/dvips/base/8 +r.enc} + LaTeX Warning: Citation `IGRF' on page 27 undefined on input line 96. @@ -4950,7 +4920,91 @@ LaTeX Warning: Reference `FIG:P1:MAG:11' on page 27 undefined on input line 199 . -)) [27]/build/reproducible-path/python-escript-5.6/escriptcore/src/DataTagged.cpp:1029: warning: no matching class member found for +) ] [29 ]/usr/share/texlive/texmf- +dist/fonts/type1/urw/courier/ucrr8a.pfb> [30<]/usr/share/texlive/texmf-dist/fonts/type1/urw/helvetic/uhvr8a. +pfb +Chapter 3. +)>] +Output written on install.pdf (28 pages, 167337 bytes). +Transcript written on install.log. +cd debian/tmp3/posix/doc/install && makeindex install.idx + +Chapter 4. + +LaTeX Warning: Citation `LOKE2014' on page 33 undefined on input line 30. + + +LaTeX Warning: Reference `sec:forward DCRES' on page 33 undefined on input line + 35. + + +LaTeX Warning: Reference `fig:HalfSphere' on page 33 undefined on input line 39 +. + +[33]>] +[26pdfTeX warning (ext4): destination with the same identifier (name{figure.2.8 +}) has been already used, duplicate ignored + ...shipout:D \box_use:N \l_shipout_box + +l.108 \chapter + {Heat Diffusion in Two Dimensions} dummy) +Possible candidates: + 'DataTypes::RealVectorType::reference escript::Data::getDataAtOffsetRW(DataTypes::RealVectorType::size_type i, DataTypes::real_t dummy)' + 'DataTypes::CplxVectorType::reference escript::Data::getDataAtOffsetRW(DataTypes::CplxVectorType::size_type i, DataTypes::cplx_t dummy)' + +/build/reproducible-path/python-escript-5.6/escriptcore/src/Data.cpp:4702: warning: no matching class member found for + DataTypes::CplxVectorType::const_reference Data::getDataAtOffsetRO(DataTypes::RealVectorType::size_type i, std::complex< real_t > dummy) +Possible candidates: + 'DataTypes::RealVectorType::const_reference escript::Data::getDataAtOffsetRO(DataTypes::RealVectorType::size_type i, DataTypes::real_t dummy)' + 'DataTypes::CplxVectorType::const_reference escript::Data::getDataAtOffsetRO(DataTypes::CplxVectorType::size_type i, DataTypes::cplx_t dummy)' + +/build/reproducible-path/python-escript-5.6/escriptcore/src/Data.cpp:5664: warning: documented symbol 'Data escript::condEvalWorker' was not declared or defined. + [34/build/reproducible-path/python-escript-5.6/escriptcore/src/Data.h:1973: warning: no uniquely matching class member found for + DataTypes::cplx_t * escript::Data::getSampleDataRW(DataTypes::CplxVectorType::size_type sampleNo, DataTypes::cplx_t dummy) +Possible candidates: + 'DataTypes::real_t * escript::Data::getSampleDataRW(DataTypes::RealVectorType::size_type sampleNo, DataTypes::real_t dummy=0)' at line 625 of file /build/reproducible-path/python-escript-5.6/escriptcore/src/Data.h + 'DataTypes::cplx_t * escript::Data::getSampleDataRW(DataTypes::RealVectorType::size_type sampleNo, DataTypes::cplx_t dummy)' at line 628 of file /build/reproducible-path/python-escript-5.6/escriptcore/src/Data.h + +/build/reproducible-path/python-escript-5.6/escriptcore/src/Data.h:2005: warning: no uniquely matching class member found for + const DataTypes::cplx_t * escript::Data::getSampleDataRO(DataTypes::RealVectorType::size_type sampleNo, std::complex< real_t > dummy) const +Possible candidates: + 'const DataTypes::real_t * escript::Data::getSampleDataRO(DataTypes::RealVectorType::size_type sampleNo, DataTypes::real_t dummy=0) const' at line 611 of file /build/reproducible-path/python-escript-5.6/escriptcore/src/Data.h + 'const DataTypes::cplx_t * escript::Data::getSampleDataRO(DataTypes::CplxVectorType::size_type sampleNo, DataTypes::cplx_t dummy) const' at line 614 of file /build/reproducible-path/python-escript-5.6/escriptcore/src/Data.h + + dummy) const Possible candidates: 'DataTypes::RealVectorType::const_reference escript::DataTagged::getDataByTagRO(int tag, DataTypes::RealVectorType::size_type i, DataTypes::real_t dummy=0) const' @@ -4962,24 +5016,19 @@ 'DataTypes::RealVectorType::reference escript::DataTagged::getDataByTagRW(int tag, DataTypes::RealVectorType::size_type i, DataTypes::real_t dummy=0)' 'DataTypes::CplxVectorType::reference escript::DataTagged::getDataByTagRW(int tag, DataTypes::CplxVectorType::size_type i, DataTypes::cplx_t dummy)' - [28 dummy) Possible candidates: 'DataTypes::RealVectorType::reference escript::DataTagged::getDefaultValueRW(DataTypes::RealVectorType::size_type i, DataTypes::real_t dummy=0)' 'DataTypes::CplxVectorType::reference escript::DataTagged::getDefaultValueRW(DataTypes::CplxVectorType::size_type i, DataTypes::cplx_t dummy)' -> ]/build/reproducible-path/python-escript-5.6/escriptcore/src/DataVector.h:148: warning: no matching file member found for +/build/reproducible-path/python-escript-5.6/escriptcore/src/DataVector.h:148: warning: no matching file member found for void escript::DataTypes::copyPoint(&dest, long doffset, long nvals, const &src, long soffset) Possible candidates: 'void copyPoint(RealVectorType &dest, vec_size_type doffset, vec_size_type nvals, const RealVectorType &src, vec_size_type soffset)' at line 137 of file /build/reproducible-path/python-escript-5.6/escriptcore/src/DataVector.h @@ -5017,7 +5066,7 @@ 'escript::DataTypes::DataVectorAlt< T >::DataVectorAlt(const DataVectorAlt< T > &other)' 'escript::DataTypes::DataVectorAlt< T >::DataVectorAlt(const size_type size, const value_type val=0.0, const size_type blockSize=1)' - [29/build/reproducible-path/python-escript-5.6/escriptcore/src/DataVectorOps.h:62: warning: no matching file member found for +/build/reproducible-path/python-escript-5.6/escriptcore/src/DataVectorOps.h:62: warning: no matching file member found for void escript::matMult(const &left, const std::vector< int > &leftShape, long leftOffset, const &right, const std::vector< int > &rightShape, long rightOffset, &result, const std::vector< int > &resultShape) Possible candidates: 'void matMult(const DataTypes::RealVectorType &left, const DataTypes::ShapeType &leftShape, DataTypes::RealVectorType::size_type leftOffset, const DataTypes::RealVectorType &right, const DataTypes::ShapeType &rightShape, DataTypes::RealVectorType::size_type rightOffset, DataTypes::RealVectorType &result, const DataTypes::ShapeType &resultShape)' at line 39 of file /build/reproducible-path/python-escript-5.6/escriptcore/src/DataVectorOps.cpp @@ -5049,8 +5098,7 @@ 'void binaryOpVectorLeftScalar(DataTypes::RealVectorType &res, typename DataTypes::RealVectorType::size_type resOffset, const typename DataTypes::RealVectorType::size_type samplesToProcess, const typename DataTypes::RealVectorType::size_type sampleSize, const DataTypes::real_t *left, const bool leftreset, const DataTypes::RealVectorType &right, typename DataTypes::RealVectorType::size_type rightOffset, escript::ES_optype operation, bool singlerightsample)' at line 639 of file /build/reproducible-path/python-escript-5.6/escriptcore/src/DataVectorOps.cpp 'void binaryOpVectorLeftScalar(ResVEC &res, typename ResVEC::size_type resOffset, const typename ResVEC::size_type samplesToProcess, const typename ResVEC::size_type sampleSize, const LSCALAR *left, const bool leftreset, const RVEC &right, typename RVEC::size_type rightOffset, escript::ES_optype operation, bool singlerightsample)' at line 941 of file /build/reproducible-path/python-escript-5.6/escriptcore/src/DataVectorOps.h - &inShape, long inOffset, &out, const std::vector< int > &outShape, long outOffset, int count, escript::LapackInverseHelper &helper) Possible candidates: 'int matrix_inverse(const DataTypes::RealVectorType &in, const DataTypes::ShapeType &inShape, DataTypes::RealVectorType::size_type inOffset, DataTypes::RealVectorType &out, const DataTypes::ShapeType &outShape, DataTypes::RealVectorType::size_type outOffset, int count, LapackInverseHelper &helper)' at line 207 of file /build/reproducible-path/python-escript-5.6/escriptcore/src/DataVectorOps.cpp - (PNG copy)/build/reproducible-path/python-escript-5.6/escriptcore/src/DataVectorOps.h:1487: warning: no matching file member found for +/build/reproducible-path/python-escript-5.6/escriptcore/src/DataVectorOps.h:1487: warning: no matching file member found for bool escript::vectorHasNaN(const &in, long inOffset, size_t count) Possible candidates: 'bool vectorHasNaN(const DataTypes::RealVectorType &in, DataTypes::RealVectorType::size_type inOffset, size_t count)' at line 1473 of file /build/reproducible-path/python-escript-5.6/escriptcore/src/DataVectorOps.h -> ])Install file: "dudley/src/ElementType.h" as "debian/stage3/include/dudley/ElementType.h" - -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Co -okJointDUMMY.texInstall file: "dudley/src/NodeMapping.h" as "debian/stage3/include/dudley/NodeMapping.h" -Install file: "escriptcore/src/AbstractTransportProblem.h" as "debian/stage3/include/escript/AbstractTransportProblem.h" - [30] -Chapter 3. -) [31])>] - -LaTeX Warning: Reference `fig:onedheatout1 002' on page 25 undefined on input l -ine 116. - - -LaTeX Warning: Reference `fig:onedheatout 002' on page 25 undefined on input li -ne 119. - - -LaTeX Warning: Float too large for page by 10.55325pt on input line 146. - -) [25 -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Co -okDcRes.texpdfTeX warning (ext4): destination with the same identifier (name{figure.2 -.7}) has been already used, duplicate ignored - ...shipout:D \box_use:N \l_shipout_box - -l.108 \chapter - {Heat Diffusion in Two Dimensions} &integrals, const escript::Data &arg) const Possible candidates: 'virtual void dudley::DudleyDomain::setToIntegrals(std::vector< escript::DataTypes::real_t > &integrals, const escript::Data &arg) const' at line 516 of file /build/reproducible-path/python-escript-5.6/dudley/src/DudleyDomain.h @@ -5130,19 +5145,18 @@ 'dim_t dudley::NodeFile::createDenseNodeLabeling(IndexVector &nodeDistribution, const IndexVector &dofDistribution)' 'dim_t finley::NodeFile::createDenseNodeLabeling(IndexVector &nodeDistribution, const IndexVector &dofDistribution)' - -(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amssymb.sty/build/reproducible-path/python-escript-5.6/finley/src/ElementFile.cpp:205: warning: no matching class member found for +> &newNode, index_t offset) Possible candidates: 'void dudley::ElementFile::relabelNodes(const index_t *newNode, index_t offset)' 'void finley::ElementFile::relabelNodes(const IndexVector &newNode, index_t offset)' - - -LaTeX Warning: Reference `FIG:EX:DIRAC' on page 37 undefined on input line 75. - -)) [37 &integrals, const escript::Data &arg) const Possible candidates: 'virtual void finley::FinleyDomain::setToIntegrals(std::vector< escript::DataTypes::real_t > &integrals, const escript::Data &arg) const' at line 637 of file /build/reproducible-path/python-escript-5.6/finley/src/FinleyDomain.h @@ -5154,29 +5168,32 @@ 'virtual void finley::FinleyDomain::setToIntegrals(std::vector< escript::DataTypes::real_t > &integrals, const escript::Data &arg) const' at line 637 of file /build/reproducible-path/python-escript-5.6/finley/src/FinleyDomain.h 'virtual void finley::FinleyDomain::setToIntegrals(std::vector< escript::DataTypes::cplx_t > &integrals, const escript::Data &arg) const' at line 639 of file /build/reproducible-path/python-escript-5.6/finley/src/FinleyDomain.h +Install file: "escriptcore/src/AbstractDomain.h" as "debian/stage3/include/escript/AbstractDomain.h" +Install file: "escriptcore/src/DataVector.h" as "debian/stage3/include/escript/DataVector.h" +>] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/execute +.tex [38]/build/reproducible-path/python-escript-5.6/paso/src/Options.cpp:31: warning: no matching class member found for + paso::Options::Options(const bp::object &options) +Possible candidates: + 'paso::Options::Options()' + 'paso::Options::Options(const boost::python::object &options)' -Chapter 4. - -LaTeX Warning: Citation `LOKE2014' on page 33 undefined on input line 30. +Chapter 2. -LaTeX Warning: Reference `sec:forward DCRES' on page 33 undefined on input line - 35. +LaTeX Warning: Reference `FirstSteps' on page 39 undefined on input line 31. -LaTeX Warning: Reference `fig:HalfSphere' on page 33 undefined on input line 39 -. +LaTeX Warning: Citation `OPENMP' on page 39 undefined on input line 46. -[33 -(/usr/share/texlive/texmf-dist/tex/latex/underscore/underscore.sty])/build/reproducible-path/python-escript-5.6/paso/src/Options.cpp:31: warning: no matching class member found for - paso::Options::Options(const bp::object &options) -Possible candidates: - 'paso::Options::Options()' - 'paso::Options::Options(const boost::python::object &options)' +LaTeX Warning: Citation `MPI' on page 39 undefined on input line 47. -(/usr/share/texlive/texmf-dist/tex/latex/hyperref/hyperref.sty -(/usr/share/texlive/texmf-dist/tex/generic/ltxcmds/ltxcmds.sty)/build/reproducible-path/python-escript-5.6/ripley/src/Brick.cpp:3684: warning: no uniquely matching class member found for +[39]entering extended mode +LaTeX2e <2020-10-01> patch level 4 +L3 programming layer <2021-01-09> xparse <2020-03-03> +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/inst +all.tex/build/reproducible-path/python-escript-5.6/ripley/src/Brick.cpp:3684: warning: no uniquely matching class member found for escript::Data ripley::Brick::randomFill(const std::vector< int > &shape, const escript::FunctionSpace &what, long seed, const bp::tuple &filter) const Possible candidates: 'virtual escript::Data ripley::Brick::randomFill(const escript::DataTypes::ShapeType &shape, const escript::FunctionSpace &what, long seed, const boost::python::tuple &filter) const' at line 193 of file /build/reproducible-path/python-escript-5.6/ripley/src/Brick.h @@ -5188,52 +5205,45 @@ 'virtual escript::Data ripley::Brick::randomFillWorker(const escript::DataTypes::ShapeType &shape, long seed, const boost::python::tuple &filter) const' at line 279 of file /build/reproducible-path/python-escript-5.6/ripley/src/Brick.h 'escript::Data speckley::Brick::randomFillWorker(const escript::DataTypes::ShapeType &shape, long seed, const boost::python::tuple &filter) const' at line 337 of file /build/reproducible-path/python-escript-5.6/speckley/src/Brick.h - [34Install file: "escriptcore/src/WrappedArray.h" as "debian/stage3/include/escript/WrappedArray.h" - &shape, const escript::FunctionSpace &what, long seed, const bp::tuple &filter) const Possible candidates: 'virtual escript::Data ripley::Rectangle::randomFill(const escript::DataTypes::ShapeType &shape, const escript::FunctionSpace &what, long seed, const boost::python::tuple &filter) const' at line 196 of file /build/reproducible-path/python-escript-5.6/ripley/src/Rectangle.h 'virtual escript::Data speckley::Rectangle::randomFill(const escript::DataTypes::ShapeType &shape, const escript::FunctionSpace &what, long seed, const boost::python::tuple &filter) const' at line 192 of file /build/reproducible-path/python-escript-5.6/speckley/src/Rectangle.h -)>] -[26pdfTeX warning (ext4): destination with the same identifier (name{figure.2.8 -}) has been already used, duplicate ignored - ...shipout:D \box_use:N \l_shipout_box - -l.108 \chapter - {Heat Diffusion in Two Dimensions} ]) +(/usr/share/texlive/texmf-dist/tex/latex/graphics/keyval.sty) [35Install file: "escriptcore/src/LapackInverseHelper.h" as "debian/stage3/include/escript/LapackInverseHelper.h" +] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/escript +.tex [36] [37] [38] +(/usr/share/texlive/texmf-dist/tex/generic/iftex/ifvtex.sty +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/In +troPart2.tex/build/reproducible-path/python-escript-5.6/speckley/src/Rectangle.cpp:1262: warning: no uniquely matching class member found for escript::Data speckley::Rectangle::randomFill(const std::vector< int > &shape, const escript::FunctionSpace &fs, long seed, const bp::tuple &filter) const Possible candidates: 'virtual escript::Data ripley::Rectangle::randomFill(const escript::DataTypes::ShapeType &shape, const escript::FunctionSpace &what, long seed, const boost::python::tuple &filter) const' at line 196 of file /build/reproducible-path/python-escript-5.6/ripley/src/Rectangle.h 'virtual escript::Data speckley::Rectangle::randomFill(const escript::DataTypes::ShapeType &shape, const escript::FunctionSpace &what, long seed, const boost::python::tuple &filter) const' at line 192 of file /build/reproducible-path/python-escript-5.6/speckley/src/Rectangle.h -(/usr/share/texlive/texmf-dist/tex/generic/pdfescape/pdfescape.sty) -(/usr/share/texlive/texmf-dist/tex/latex/hycolor/hycolor.sty) -(/usr/share/texlive/texmf-dist/tex/latex/letltxmacro/letltxmacro.sty) -(/usr/share/texlive/texmf-dist/tex/latex/auxhook/auxhook.sty) -(/usr/share/texlive/texmf-dist/tex/latex/kvoptions/kvoptions.sty)> ]) [35] [36] [37] [38] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/In -troPart2.tex -(/usr/share/texlive/texmf-dist/tex/generic/bitset/bitset.sty +(/usr/share/texlive/texmf-dist/tex/generic/iftex/iftex.sty)) +Chapter 3. +[43] + +Package geometry Warning: Over-specification in `h'-direction. + `width' (478.00812pt) is ignored. + +) Chapter 5. LaTeX Warning: Reference `Chp:ref:regularization' on page 39 undefined on input @@ -5269,8 +5279,7 @@ LaTeX Warning: Reference `chapter:ref:Drivers:Drivers' on page 39 undefined on input line 72. -[39 -(/usr/share/texlive/texmf-dist/tex/generic/bigintcalc/bigintcalc.sty]) +[39] (/usr/share/texlive/texmf-dist/tex/latex/psnfss/times.sty LaTeX Warning: Reference `fig:classes' on page 40 undefined on input line 75. @@ -5303,9 +5312,39 @@ (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Dr -ivers.tex) [40> ] +ivers.tex) + +LaTeX Warning: Reference `SEC Projection' on page 44 undefined on input line 79 +. + + +LaTeX Warning: Reference `SEC Projection' on page 44 undefined on input line 79 +. + + +Underfull \hbox (badness 1648) in paragraph at lines 79--79 +[] \OT1/ptm/m/sc/9 Fig-ure 3.1\OT1/ptm/m/n/9 : []De-pen-dency of func-tion spac +es in []. An ar-row in-di-cates that a func-tion in the + +LaTeX Warning: Citation `LBB' on page 44 undefined on input line 83. + + +LaTeX Warning: Reference `ESCRIPT DEP' on page 44 undefined on input line 88. + + +LaTeX Warning: Reference `ESCRIPT DEP' on page 44 undefined on input line 107. + + +LaTeX Warning: Reference `ESCRIPT DEP' on page 44 undefined on input line 119. + + +LaTeX Warning: Reference `SEC Projection' on page 44 undefined on input line 12 +1. + +[44 [40 ]>] +(/usr/share/texlive/texmf-dist/tex/latex/listings/listings.sty LaTeX Warning: Reference `chapter:ref:inversion cost function' on page 41 undef ined on input line 14. @@ -5358,9 +5397,13 @@ LaTeX Warning: Reference `Chp:ref:domain builder' on page 41 undefined on input line 103. -[41 -(/usr/share/texlive/texmf-dist/tex/latex/base/atbegshi-ltx.sty)]) -(/usr/share/texlive/texmf-dist/tex/latex/hyperref/hpdftex.def>] +[41] +(/usr/share/texlive/texmf-dist/tex/latex/listings/lstmisc.sty + +LaTeX Warning: Citation `NUMPY' on page 45 undefined on input line 150. + +[45]>]) +(/usr/share/texlive/texmf-dist/tex/latex/listings/listings.cfg LaTeX Warning: Reference `Chp:cook:magnetic inversion' on page 42 undefined on input line 111. @@ -5434,83 +5477,14 @@ LaTeX Warning: Citation `Nocedal1980' on page 42 undefined on input line 182. -[42 -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/execute -.tex]a/src/RipleyNodes.cpp... -Parsing file /build/reproducible-path/python-escript-5.6/weipa/src/RipleyNodes.cpp... -Preprocessing /build/reproducible-path/python-escript-5.6/weipa/src/RipleyNodes.h... -Parsing file /build/reproducible-path/python-escript-5.6/weipa/src/RipleyNodes.h... -Preprocessing /build/reproducible-path/python-escript-5.6/weipa/src/SpeckleyDomain.cpp... -Parsing file /build/reproducible-path/python-escript-5.6/weipa/src/SpeckleyDomain.cpp... -Preprocessing /build/reproducible-path/python-escript-5.6/weipa/src/SpeckleyDomain.h... -Parsing file /build/reproducible-path/python-escript-5.6/weipa/src/SpeckleyDomain.h... -Preprocessing /build/reproducible-path/python-escript-5.6/weipa/src/SpeckleyElements.cpp... -Parsing file /build/reproducible-path/python-escript-5.6/weipa/src/SpeckleyElements.cpp... -Preprocessing /build/reproducible-path/python-escript-5.6/weipa/src/SpeckleyElements.h... -Parsing file /build/reproducible-path/python-escript-5.6/weipa/src/SpeckleyElements.h... -Preprocessing /build/reproducible-path/python-escript-5.6/weipa/src/SpeckleyNodes.cpp... -Parsing file /build/reproducible-path/python-escript-5.6/weipa/src/SpeckleyNodes.cpp... -Preprocessing /build/reproducible-path/python-escript-5.6/weipa/src/SpeckleyNodes.h... -Parsing file /build/reproducible-path/python-escript-5.6/weipa/src/SpeckleyNodes.h... -Preprocessing /build/reproducible-path/python-escript-5.6/weipa/src/VisItControl.cpp... -Parsing file /build/reproducible-path/python-escript-5.6/weipa/src/VisItControl.cpp... -Preprocessing /build/reproducible-path/python-escript-5.6/weipa/src/VisItControl.h... -Parsing file /build/reproducible-path/python-escript-5.6/weipa/src/VisItControl.h... -Preprocessing /build/reproducible-path/python-escript-5.6/weipa/src/VisItData.cpp... -Parsing file /build/reproducible-path/python-escript-5.6/weipa/src/VisItData.cpp... -Preprocessing /build/reproducible-path/python-escript-5.6/weipa/src/VisItData.h... -Parsing file /build/reproducible-path/python-escript-5.6/weipa/src/VisItData.h... -Preprocessing /build/reproducible-path/python-escript-5.6/weipa/src/vtkCellType.h... -Parsing file /build/reproducible-path/python-escript-5.6/weipa/src/vtkCellType.h... -Preprocessing /build/reproducible-path/python-escript-5.6/weipa/src/weipa.h... -Parsing file /build/reproducible-path/python-escript-5.6/weipa/src/weipa.h... -Preprocessing /build/reproducible-path/python-escript-5.6/weipa/src/weipacpp.cpp... -Parsing file /build/reproducible-path/python-escript-5.6/weipa/src/weipacpp.cpp... -Preprocessing /build/reproducible-path/python-escript-5.6/weipa/src/WeipaException.h... -Parsing file /build/reproducible-path/python-escript-5.6/weipa/src/WeipaException.h... -Building macro definition list... -Building group list... -Building directory list... -Building namespace list... -Building file list... -Building class list... -Computing nesting relations for classes... -Associating documentation with classes... -Building example list... -Searching for enumerations... -Searching for documented typedefs... -Searching for members imported via using declarations... -Searching for included using directives... -Searching for documented variables... -Building interface member list... -Building member list... -Searching for friends... -Searching for documented defines... -Computing class inheritance relations... -Computing class usage relations... -Flushing cached template relations that have become invalid... -Computing class relations... -Add enum values to enums... -Searching for member function documentation... -Creating members for template instances... -Building page list... -Search for main page... -Computing page relations... -Determining the scope of groups... -Sorting lists... -Determining which enums are documented -Computing member relations... -Building full member lists recursively... -Adding members to member groups. -Computing member references... -Inheriting documentation... -Generating disk names... -Adding source references... -Adding xrefitems... -Sorting member lists... -Setting anonymous enum type... -Computing dependencies between directories... -Generating citations pa [38] +[42) +Chapter 3. + +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/exa +mple03.tex])Install file: "dudley/src/NodeMapping.h" as "debian/stage3/include/dudley/NodeMapping.h" +Install file: "escriptcore/src/AbstractTransportProblem.h" as "debian/stage3/include/escript/AbstractTransportProblem.h" +Install file: "dudley/src/ElementType.h" as "debian/stage3/include/dudley/ElementType.h" + LaTeX Warning: Reference `Chp:ref:domain builder' on page 43 undefined on input line 213. @@ -5534,62 +5508,12 @@ LaTeX Warning: Reference `Chp:ref:domain builder' on page 43 undefined on input line 233. -)) -(/usr/share/texlive/texmf-dist/tex/latex/base/atveryend-ltx.sty) [43] +)) [43] +(/usr/share/texlive/texmf-dist/tex/generic/iftex/ifpdf.sty) (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Do mains.tex [44] -Chapter 2. - -LaTeX Warning: Reference `FirstSteps' on page 39 undefined on input line 31. - - -LaTeX Warning: Citation `OPENMP' on page 39 undefined on input line 46. - - -LaTeX Warning: Citation `MPI' on page 39 undefined on input line 47. - -[39] -(/usr/share/texlive/texmf-dist/tex/latex/rerunfilecheck/rerunfilecheck.sty [40] -Chapter 6. - -LaTeX Warning: Reference `fig:cartesianDomain' on page 45 undefined on input li -ne 11. - - -LaTeX Warning: Reference `fig:cartesianDomain' on page 45 undefined on input li -ne 21. - - -LaTeX Warning: Reference `fig:cartesianDomain' on page 45 undefined on input li -ne 26. - - -LaTeX Warning: Reference `fig:geodeticDomain' on page 45 undefined on input lin -e 46. - - -LaTeX Warning: Citation `Featherstone2008a' on page 45 undefined on input line -48. - - -LaTeX Warning: Reference `REF:FIG:REF:10' on page 45 undefined on input line 79 -. - -[45>]] -(/usr/share/texlive/texmf-dist/tex/generic/uniquecounter/uniquecounter.sty -Chapter 3. - -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/exa -mple03.tex [46 ] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/escript -.tex -(/usr/share/texlive/texmf-dist/tex/latex/oberdiek/hypcap.styInstall file: "paso/src/SystemMatrix.h" as "debian/stage3/include/paso/SystemMatrix.h" -) [47 ...shipout:D \box_use:N \l_shipout_box l.141 \begin{python} ]>] (/usr/share/texlive/texmf-dist/tex/latex/graphics/color.sty -(/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/color.cfg)) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/elis -t.tex +osix/doc/cookbook/figures/twodheatdiff.pdf>] [46 -))) (/usr/share/texlive/texmf-dist/tex/latex/upquote/upquote.sty -(/usr/share/texlive/texmf-dist/tex/latex/base/textcomp.sty)) +LaTeX Warning: Citation `NETCDF' on page 47 undefined on input line 318. + +[47Install file: "escriptcore/src/DataVectorAlt.h" as "debian/stage3/include/escript/DataVectorAlt.h" +>] ] +(/usr/share/texlive/texmf-dist/tex/latex/graphics/trig.sty) [47 +(/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/graphics.cfg) ] -(/usr/share/texlive/texmf-dist/tex/latex/l3backend/l3backend-pdftex.def -LaTeX Warning: Reference `sec: plot T' on page 30 undefined on input line 243. +Underfull \hbox (badness 10000) in paragraph at lines 306--311 -(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1pcr.fd)) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/inst -all.aux +[30] +(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amssymb.sty [52])>] +(/usr/share/texlive/texmf-dist/tex/latex/underscore/underscore.sty) +Underfull \vbox (badness 1348) has occurred while \output is active [53 LaTeX Warning: Reference `equ:ref:coordinates:100' on page 48 undefined on inpu t line 211. @@ -5737,55 +5752,35 @@ Underfull \hbox (badness 10000) in paragraph at lines 261--261 [][][]\OT1/ptm/m/n/8 In gen-eral any or-thog-o-nal co-or-di-nate trans-for-ma-t ion can be sup-ported by build-ing sub-classes of the -[48] +[48]] +(/usr/share/texlive/texmf-dist/tex/latex/hyperref/hyperref.sty -LaTeX Warning: Citation `NETCDF' on page 47 undefined on input line 318. +LaTeX Warning: Reference `fig:mayavi window' on page 31 undefined on input line + 360. -[47 ] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/intr -o.aux) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/flat -pak.aux) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/cond -a.aux) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/dock -er.aux -LaTeX Warning: Label `chap:flatpak' multiply defined. +LaTeX Warning: Reference `fig:mayavi window2' on page 31 undefined on input lin +e 365. ) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/sour -ce.aux) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/cxx1 -1.aux) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/tril -inos.aux)) -Overfull \hbox (46.961pt too wide) in paragraph at lines 286--287 -[][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][] - - -LaTeX Warning: Reference `fig:twodhdans' on page 30 undefined on input line 301 -. - +(/usr/share/texlive/texmf-dist/tex/generic/ltxcmds/ltxcmds.sty [31)] [32pdfTeX warning (ext4): destination with the same identifier (name{fig +ure.3.2}) has been already used, duplicate ignored + ...shipout:D \box_use:N \l_shipout_box + +l.112 \chapter + {Complex Geometries} ...shipout:D \box_use:N \l_shipout_box - -l.112 \chapter - {Complex Geometries} ] [5] [55] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/flat -pak.tex [6] +n/figures//domainbuilder.pdf>] [62 +(/usr/share/texlive/texmf-dist/tex/generic/bitset/bitset.sty] LaTeX Warning: Reference `sec:ref:reference systems' on page 62 undefined on in put line 44. @@ -6008,9 +5969,9 @@ LaTeX Warning: Reference `fig:cartesianDomain' on page 62 undefined on input li ne 65. -[62] -Chapter 2. -(/usr/share/texlive/texmf-dist/tex/latex/listings/lstlang1.sty [56 +[62 +(/usr/share/texlive/texmf-dist/tex/latex/psnfss/omspcr.fd) +(/usr/share/texlive/texmf-dist/tex/generic/bigintcalc/bigintcalc.sty])) [63 LaTeX Warning: Citation `ESCRIPT' on page 63 undefined on input line 158. @@ -6022,8 +5983,8 @@ LaTeX Warning: Citation `ERMAPPER' on page 64 undefined on input line 277. -[64] [57]) -(/usr/share/texlive/texmf-dist/tex/latex/listings/lstlang2.sty +[64] +(/usr/share/texlive/texmf-dist/tex/latex/base/atbegshi-ltx.sty)) LaTeX Warning: Reference `SEC:P1:GRAV:REMARK:DATAHOLES' on page 65 undefined on input line 309. @@ -6046,23 +6007,27 @@ LaTeX Warning: Reference `sec:ref:reference systems' on page 65 undefined on in put line 359. -[65]) -(/usr/share/texlive/texmf-dist/tex/latex/listings/lstlang3.sty [58] +[65 +(/usr/share/texlive/texmf-dist/tex/latex/hyperref/hpdftex.def] +Overfull \hbox (30.76083pt too wide) in paragraph at lines 1718--1719 +[][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][ +][][][][][][][][][][][][][][][][][][][][][][][][][][][][] +[64> LaTeX Warning: Reference `eq:synthdata' on page 66 undefined on input line 430. -) [66]) +) [66] +))) LaTeX Warning: Reference `ref:GRAV:EQU:101' on page 73 undefined on input line 37. @@ -6124,7 +6101,8 @@ LaTeX Warning: Reference `ref:GRAV:EQU:100' on page 73 undefined on input line 89. -[73] [14] +[73 (/usr/share/texlive/texmf-dist/tex/latex/upquote/upquote.sty [66] +(/usr/share/texlive/texmf-dist/tex/latex/base/textcomp.sty))] LaTeX Warning: Reference `ref:GRAV:EQU:12' on page 74 undefined on input line 9 9. @@ -6153,7 +6131,20 @@ LaTeX Warning: Reference `ref:GRAV:EQU:9' on page 74 undefined on input line 16 4. -[74] [62] +[74 +(/usr/share/texlive/texmf-dist/tex/latex/comment/comment.sty +Excluding comment 'comment') [67 +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/veri +nfo.tex)Install file: "escriptcore/src/TransportProblemException.h" as "debian/stage3/include/escript/TransportProblemException.h" +Install file: "paso/src/Functions.h" as "debian/stage3/include/paso/Functions.h" +Install file: "paso/src/MKL.h" as "debian/stage3/include/paso/MKL.h" +]Install file: "paso/src/MUMPS.h" as "debian/stage3/include/paso/MUMPS.h" +Install file: "paso/src/Preconditioner.h" as "debian/stage3/include/paso/Preconditioner.h" +Install file: "paso/src/UMFPACK.h" as "debian/stage3/include/paso/UMFPACK.h" + +Writing index file install.idx +(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1ptm.fdInstall file: "paso/src/performance.h" as "debian/stage3/include/paso/performance.h" +) LaTeX Warning: Reference `ref:GRAV:EQU:10' on page 75 undefined on input line 1 70. @@ -6162,11 +6153,30 @@ LaTeX Warning: Reference `ref:GRAV:EQU:201' on page 75 undefined on input line 194. -) -(/usr/share/texlive/texmf-dist/tex/latex/psnfss/omspcr.fd)g++ -o debian/tmp3/posix/dudley/src/Assemble_PDE_System_3D.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/Assemble_PDE_System_3D.cpp - +)] (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Fo rwardMagnetic.tex +(/usr/share/texlive/texmf-dist/tex/latex/l3backend/l3backend-pdftex.def) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/inst +all.aux [68] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/intr +o.aux) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/flat +pak.aux) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/cond +a.aux) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/dock +er.aux + +LaTeX Warning: Label `chap:flatpak' multiply defined. + +) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/sour +ce.aux [69) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/cxx1 +1.aux) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/tril +inos.aux)) LaTeX Warning: Citation `IGRF' on page 75 undefined on input line 34. @@ -6189,7 +6199,7 @@ LaTeX Warning: Reference `chapter:ref:inversion cost function' on page 75 undef ined on input line 65. -[75] [63 +[75] LaTeX Warning: Reference `ref:EQU:REG:6b' on page 76 undefined on input line 10 1. @@ -6210,7 +6220,24 @@ LaTeX Warning: Reference `ref:MAG:EQU:8' on page 76 undefined on input line 141 . -[76]] +[76]>] +*geometry* driver: auto-detecting +*geometry* detected driver: pdftex +(/usr/share/texlive/texmf-dist/tex/context/base/mkii/supp-pdf.mkii [33pdfTeX warning (ext4): destination +with the same identifier (name{figure.3.3}) has been already used, duplicate ig +nored + ...shipout:D \box_use:N \l_shipout_box + +l.112 \chapter + {Complex Geometries}pdfTeX warning (ext4): destination with the s +ame identifier (name{figure.3.4}) has been already used, duplicate ignored + ...shipout:D \box_use:N \l_shipout_box + +l.112 \chapter + {Complex Geometries} -Underfull \hbox (badness 10000) in paragraph at lines 159--160 - - -Underfull \hbox (badness 10000) in paragraph at lines 207--208 - -[15]] [33pdfTeX warning (ext4): destination -with the same identifier (name{figure.3.3}) has been already used, duplicate ig -nored - ...shipout:D \box_use:N \l_shipout_box - -l.112 \chapter - {Complex Geometries}pdfTeX warning (ext4): destination with the s -ame identifier (name{figure.3.4}) has been already used, duplicate ignored - ...shipout:D \box_use:N \l_shipout_box - -l.112 \chapter - {Complex Geometries} ] (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Ma -pping.aux) +pping.aux) [34] (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Fo -rwardModels.aux)) [20 - -LaTeX Warning: There were undefined references. - - -LaTeX Warning: Label(s) may have changed. Rerun to get cross-references right. +rwardModels.aux)g++ -o debian/tmp3/posix/dudley/src/Assemble_NodeCoordinates.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/Assemble_NodeCoordinates.cpp - -Package rerunfilecheck Warning: File `inversion.out' has changed. -(rerunfilecheck) Rerun to get outlines right -(rerunfilecheck) or use package `bookmark'. - - ) -(see the transcript file for additional information){/usr/share/texlive/texmf-d -ist/fonts/enc/dvips/base/8r.enc}>]]g++ -o debian/tmp3/posix/dudley/src/Assemble_addToSystemMatrix.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/Assemble_addToSystemMatrix.cpp - Chapter 4. (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/exa -mple04.tex [21 -Appendix A. -) [23 [71 [25] - - -LaTeX Warning: Reference `CHAP HEAT 2a' on page 35 undefined on input line 38. - - -Underfull \hbox (badness 10000) in paragraph at lines 37--41 - - -LaTeX Warning: Reference `fig:pycad rec' on page 35 undefined on input line 57. - - -[35]) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/inst -all.aux -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/flat -pak.aux -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/dock -er.aux]) -LaTeX Warning: There were multiply-defined labels. +LaTeX Warning: Label(s) may have changed. Rerun to get cross-references right. -Package rerunfilecheck Warning: File `install.out' has changed. +Package rerunfilecheck Warning: File `inversion.out' has changed. (rerunfilecheck) Rerun to get outlines right (rerunfilecheck) or use package `bookmark'. ) -(see the transcript file for additional information) {/usr/share/texlive/texmf-dist/fonts/enc/dvips/base/8 -r.enc} - ...shipout:D \box_use:N \l_shipout_box - -l.139 \begin{python} - ]> -Output written on install.pdf (28 pages, 170170 bytes). -Transcript written on install.log. -g++ -o debian/tmp3/posix/dudley/src/Assemble_getAssembleParameters.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/Assemble_getAssembleParameters.cpp - - -LaTeX Warning: Citation `Trilinos' on page 75 undefined on input line 181. - - -Overfull \hbox (18.97215pt too wide) in paragraph at lines 180--182 -\OT1/ptm/m/n/10 Typically, a neg-a-tive value for a di-ag-nos-tic vari-able in- -di-cates that it is un-de-fined. For more de-tails on \OT1/pcr/m/n/10 SolverOpt -ions -[75] - -LaTeX Warning: Reference `SEC Solver Options' on page 76 undefined on input lin -e 251. - - -LaTeX Warning: Reference `SEC Solver Options' on page 76 undefined on input lin -e 256. - - -LaTeX Warning: Reference `LINEARPDE.SYSTEM.5' on page 76 undefined on input lin -e 290. - - -LaTeX Warning: Reference `LINEARPDE.SINGLE.5' on page 76 undefined on input lin -e 290. - -[76] [77] - -LaTeX Warning: Reference `fig:pycad rec mesh' on page 37 undefined on input lin -e 187. - - -LaTeX Warning: Reference `fig:pycad rec' on page 37 undefined on input line 191 -. - -[37] [38pdfTeX warning (ext4): destination with the same identifier (name{figur -e.4.2}) has been already used, duplicate ignored - ...shipout:D \box_use:N \l_shipout_box - -l.194 \clearpage - g++ -o debian/tmp3/posix/dudley/src/Assemble_addToSystemMatrix.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/Assemble_addToSystemMatrix.cpp +ge... Counting members... Counting data structures... Resolving user defined references... @@ -6788,9 +6668,112 @@ Parsing code for file Coupler.cpp... Generating code for file Coupler.h... Parsing code for file CrossDomainCoupler.cpp... -Gene [82]g++ -o debian/tmp3/posix/dudley/src/Assemble_integrate.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/Assemble_integrate.cpp +Gene]g++ -o debian/tmp3/posix/dudley/src/Assemble_PDE.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/Assemble_PDE.cpp +] + +LaTeX Warning: Reference `SEC Solver Options' on page 76 undefined on input lin +e 251. + + +LaTeX Warning: Reference `SEC Solver Options' on page 76 undefined on input lin +e 256. + + +LaTeX Warning: Reference `LINEARPDE.SYSTEM.5' on page 76 undefined on input lin +e 290. + + +LaTeX Warning: Reference `LINEARPDE.SINGLE.5' on page 76 undefined on input lin +e 290. + +[76 [17]] + +LaTeX Warning: Reference `CHAP HEAT 2a' on page 35 undefined on input line 38. + + +Underfull \hbox (badness 10000) in paragraph at lines 37--41 + + +LaTeX Warning: Reference `fig:pycad rec' on page 35 undefined on input line 57. + + +[35 + [77 [18 +Output written on inversion.pdf (88 pages, 5249052 bytes). +Transcript written on inversion.log. +] + +LaTeX Warning: Reference `ESCRIPT CHAP' on page 78 undefined on input line 418. +[78]cd debian/tmp3/posix/doc/inversion && bibtex inversion + [36pdfTeX warning (ext4): destination with the same identifier (name{figur +e.4.1}) has been already used, duplicate ignored + ...shipout:D \box_use:N \l_shipout_box + +l.139 \begin{python} + [19g++ -o debian/tmp3/posix/dudley/src/Assemble_PDE_Points.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/Assemble_PDE_Points.cpp +] + +LaTeX Warning: Reference `PROJ.1' on page 79 undefined on input line 474. + + +LaTeX Warning: Reference `SEC Solver Options' on page 79 undefined on input lin +e 483. + +[79]] + +LaTeX Warning: Citation `Trilinos' on page 80 undefined on input line 530. + + +LaTeX Warning: Citation `Trilinos' on page 80 undefined on input line 581. + +[80 [20] [81]) [21] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/cxx1 +1.tex [22]] +Appendix A. +)This is BibTeX, Version 0.99d (TeX Live 2020/Debian) +The top-level auxiliary file: inversion.aux +The style file: plain.bst +Database file #1: inversion.bib + [82 [23cd debian/tmp3/posix/doc/inversion && makeindex inversion.idx +]] + LaTeX Warning: Citation `MKL' on page 83 undefined on input line 914. @@ -6799,8 +6782,26 @@ LaTeX Warning: Reference `chap:finley' on page 83 undefined on input line 923. -[83]cd debian/tmp3/posix/doc/inversion && bibtex inversion +[83 +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/tril +inos.tex [24] +LaTeX Warning: Reference `fig:pycad rec mesh' on page 37 undefined on input lin +e 187. + + +LaTeX Warning: Reference `fig:pycad rec' on page 37 undefined on input line 191 +. + +[37] [38pdfTeX warning (ext4): destination with the same identifier (name{figur +e.4.2}) has been already used, duplicate ignored + ...shipout:D \box_use:N \l_shipout_box + +l.194 \clearpage + {/usr/share/texlive/texmf-dist/fonts/enc/dvips/base/8 +r.enc} +cd debian/tmp3/posix/doc/inversion && pdflatex -interaction=nonstopmode -recorder -interaction=nonstopmode \\newcommand{\\RepVersion}{-2\\xspace}\\input{inversion.tex} inversion.tex + +Output written on install.pdf (28 pages, 170304 bytes). +Transcript written on install.log. LaTeX Warning: Reference `FIG LUMPING VALET A' on page 86 undefined on input li @@ -6922,20 +6969,51 @@ ne 119. [86 ]This is makeindex, version 2.15 [TeX Live 2020] (kpathsea + Thai support). -Scanning input file inversion.idx....done (105 entries accepted, 0 rejected). -Sorting entries....done (779 comparisons). -Generating output file inversion.ind....done (94 lines written, 0 warnings). -Output written in inversion.ind. -Transcript written in inversion.ilg. -g++ -o debian/tmp3/posix/dudley/src/Assemble_getNormal.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/Assemble_getNormal.cpp - [87 ] +ures//lumping_valet_a_1.pngInstall file: "debian/tmp3/posix/doc/install/install.pdf" as "debian/stage3/release/doc/install/install.r-2.pdf" +This is pdfTeX, Version 3.14159265-2.6-1.40.21 (TeX Live 2020/Debian) (preloaded format=pdflatex) + restricted \write18 enabled. +entering extended mode +LaTeX2e <2020-10-01> patch level 4 +L3 programming layer <2021-01-09> xparse <2020-03-03> +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/in +version.texg++ -o debian/tmp3/posix/dudley/src/Assemble_getSize.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/Assemble_getSize.cpp + +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/es +ysdoc.cls +Document Class: esysdoc +(/usr/share/texlive/texmf-dist/tex/latex/base/book.cls +Document Class: book 2020/04/10 v1.4m Standard LaTeX document class +(/usr/share/texlive/texmf-dist/tex/latex/base/bk10.clo)) +(/usr/share/texlive/texmf-dist/tex/latex/geometry/geometry.sty +(/usr/share/texlive/texmf-dist/tex/latex/graphics/keyval.sty)>] [87 +(/usr/share/texlive/texmf-dist/tex/generic/iftex/ifvtex.sty ] +(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsmath.sty +For additional information on amsmath, use the `?' option. +(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amstext.sty> ...shipout:D \box_use:N \l_shipout_box l.276 \clearpage ]) +/doc/cookbook/figures/simpleheat.png) +(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amsfonts.sty) +(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amssymb.sty) +(/usr/share/texlive/texmf-dist/tex/latex/underscore/underscore.sty) +(/usr/share/texlive/texmf-dist/tex/latex/hyperref/hyperref.sty>]) +(/usr/share/texlive/texmf-dist/tex/generic/ltxcmds/ltxcmds.sty (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/exa -mple05.tex +mple05.tex) +(/usr/share/texlive/texmf-dist/tex/generic/pdftexcmds/pdftexcmds.sty +(/usr/share/texlive/texmf-dist/tex/generic/infwarerr/infwarerr.sty)) Underfull \hbox (badness 10000) in paragraph at lines 18--25 @@ -7002,33 +7082,15 @@ l.74 l30= Line(p3, p0) patch level 4 -L3 programming layer <2021-01-09> xparse <2020-03-03> -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/in -version.tex -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/es -ysdoc.cls -Document Class: esysdoc -(/usr/share/texlive/texmf-dist/tex/latex/base/book.cls -Document Class: book 2020/04/10 v1.4m Standard LaTeX document class -(/usr/share/texlive/texmf-dist/tex/latex/base/bk10.clo)) -(/usr/share/texlive/texmf-dist/tex/latex/geometry/geometry.sty -(/usr/share/texlive/texmf-dist/tex/latex/graphics/keyval.sty) -(/usr/share/texlive/texmf-dist/tex/generic/iftex/ifvtex.sty -(/usr/share/texlive/texmf-dist/tex/generic/iftex/iftex.sty)) - -Package geometry Warning: Over-specification in `h'-direction. - `width' (478.00812pt) is ignored. - -) (/usr/share/texlive/texmf-dist/tex/latex/psnfss/times.sty) -(/usr/share/texlive/texmf-dist/tex/latex/listings/listings.sty>] -(/usr/share/texlive/texmf-dist/tex/latex/listings/lstmisc.sty) -(/usr/share/texlive/texmf-dist/tex/latex/listings/listings.cfg)) -(/usr/share/texlive/texmf-dist/tex/generic/iftex/ifpdf.sty) -(/usr/share/texlive/texmf-dist/tex/latex/base/makeidx.sty) -(/usr/share/texlive/texmf-dist/tex/latex/url/url.sty) -(/usr/share/texlive/texmf-dist/tex/latex/tools/xspace.sty) +posix/doc/cookbook/figures/anticlineheatrefraction.png +(/usr/share/texlive/texmf-dist/tex/generic/kvsetkeys/kvsetkeys.sty) +(/usr/share/texlive/texmf-dist/tex/generic/kvdefinekeys/kvdefinekeys.sty)>] +(/usr/share/texlive/texmf-dist/tex/generic/pdfescape/pdfescape.sty) +(/usr/share/texlive/texmf-dist/tex/latex/hycolor/hycolor.sty) +(/usr/share/texlive/texmf-dist/tex/latex/letltxmacro/letltxmacro.sty) +(/usr/share/texlive/texmf-dist/tex/latex/auxhook/auxhook.sty) +(/usr/share/texlive/texmf-dist/tex/latex/kvoptions/kvoptions.sty) +(/usr/share/texlive/texmf-dist/tex/latex/hyperref/pd1enc.def) LaTeX Warning: Reference `FIG LUMPING SUPG INC A' on page 88 undefined on input line 170. @@ -7091,47 +7153,17 @@ [88 ])) [89 ] [90 ]))) [89 ] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/pycad.t -ex +rwardModels.aux)) *geometry* driver: auto-detecting *geometry* detected driver: pdftex (/usr/share/texlive/texmf-dist/tex/context/base/mkii/supp-pdf.mkii [Loading MPS to PDF converter (version 2006.09.02).] ) (/usr/share/texlive/texmf-dist/tex/latex/epstopdf-pkg/epstopdf-base.sty (/usr/share/texlive/texmf-dist/tex/latex/latexconfig/epstopdf-sys.cfg)) -Chapter 5. - -LaTeX Warning: Citation `GMSH' on page 91 undefined on input line 24. - -[91] -(/usr/share/texlive/texmf-dist/tex/latex/hyperref/nameref.sty +(/usr/share/texlive/texmf-dist/tex/latex/hyperref/nameref.sty> ] [8] [9]] [90 ]}] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/do -cguide.tex [2]) [3] [4] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/in -version.toc [5]) [6] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/in -tro.tex +Generating code for f [12 ] [13 ] -LaTeX Warning: Reference `fig:PYCAD 2' on page 94 undefined on input line 219. +LaTeX Warning: Citation `ESCRIPT' on page 14 undefined on input line 138. +[14] [15 ] -[94 ] [7] [8] [9] [10] +LaTeX Warning: Citation `Telford1990a' on page 16 undefined on input line 282. + +(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1ptm.fd) + +LaTeX Warning: Citation `Telford1990a' on page 16 undefined on input line 290. + +[16] + +LaTeX Warning: Citation `ERMAPPER' on page 17 undefined on input line 327. + + +LaTeX Warning: Citation `NETCDF' on page 17 undefined on input line 327. + + +LaTeX Warning: Citation `NETCDF' on page 17 undefined on input line 336. + +[17] [18] + +LaTeX Warning: Citation `VISIT' on page 19 undefined on input line 504. + + +LaTeX Warning: Citation `mayavi' on page 19 undefined on input line 504. + + +LaTeX Warning: Citation `SILO' on page 19 undefined on input line 516. + + +LaTeX Warning: Citation `VISIT' on page 19 undefined on input line 517. + + +LaTeX Warning: Citation `GOCAD' on page 19 undefined on input line 529. + + +LaTeX Warning: Citation `ESCRIPT' on page 19 undefined on input line 631. + +[19] [20 ] [21 ]>] [22 ]) [23] (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Co -okGravity.tex [95 ] -Chapter 1. +okMagnetic.tex [24] +Chapter 5. -Underfull \hbox (badness 10000) in paragraph at lines 54--54 -[]\OT1/ptm/m/n/10 Figure 1.1: Grav-ity Anomaly Data in $\OML/cmm/m/it/10 mgal$ -\OT1/ptm/m/n/10 from West-ern Queens-land, Aus-tralia (file +LaTeX Warning: Citation `GMSH' on page 91 undefined on input line 24. -Underfull \hbox (badness 10000) in paragraph at lines 65--65 -[]\OT1/ptm/m/n/10 Figure 1.2: 3-D con-tour plot of the den-sity dis-tri-bu-tion - ob-tained by in-ver-sion of file +[91 +Chapter 2. -LaTeX Warning: Citation `ESCRIPTCOOKBOOK' on page 11 undefined on input line 76 -. +Underfull \hbox (badness 10000) in paragraph at lines 7--7 +[]\OT1/ptm/m/n/10 Figure 2.1: Mag-netic anomaly data in $\OML/cmm/m/it/10 nT$ \ +OT1/ptm/m/n/10 from West-ern Queens-land, Aus-tralia (file +[25]] [26 ]> ] + +LaTeX Warning: Reference `fig:PYCAD 2' on page 94 undefined on input line 219. + + +LaTeX Warning: Reference `fig:PYCAD 2' on page 94 undefined on input line 251. + +[94 ] [95 ] + +LaTeX Warning: Citation `IGRF' on page 27 undefined on input line 96. + + +LaTeX Warning: Citation `AGRF' on page 27 undefined on input line 97. + +) [27] [28 ] [29 ] LaTeX Warning: Reference `fig:PYCAD 5' on page 96 undefined on input line 339. @@ -7375,9 +7515,13 @@ LaTeX Warning: Reference `fig:PYCAD 5' on page 96 undefined on input line 358. [96 ] [97] [12 [98] ] [30] +Chapter 3. +) [97 [31]] [98 +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Co +okDcRes.tex [32]] LaTeX Warning: Citation `GMSH' on page 99 undefined on input line 579. @@ -7390,6 +7534,11 @@ LaTeX Warning: Citation `GMSH' on page 100 undefined on input line 682. [100] +Chapter 4. + +LaTeX Warning: Citation `LOKE2014' on page 33 undefined on input line 30. + +[33 LaTeX Warning: Citation `GMSH' on page 101 undefined on input line 698. @@ -7429,9 +7578,10 @@ LaTeX Warning: Citation `NETGEN' on page 101 undefined on input line 742. -[101] [102]) [103] +[101]] [102]) [103] (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/Models. -tex [104] +tex [34 ] [13 ] [112 ]) - -LaTeX Warning: Citation `ESCRIPT' on page 14 undefined on input line 138. - -[14] [15 ] +[111]ile FinleyVersion.h... +Parsing code for file FluxLimiter.cpp... +Generating code for file FluxLimiter.h... +Parsing code for file Functions.cpp... +Generating code for file Functions.h... +Parsing code for file FunctionSpace.cpp... +Generating code for file FunctionSpace.h... +Generating code for file FunctionSpaceException.h... +Parsing code for file FunctionSpaceFactory.cpp... +Generating code for file FunctionSpaceFactory.h... +Parsing code for file GMRES.cpp... +Parsing code for file GMRES2.cpp... +Parsing code for file ILU.cpp... +Generating code for file index.h... +Parsing code for file IndexList.cpp... +Parsing code for file IndexList.cpp... +Generating code for file IndexList.h... +Generating code for file IndexList.h... +Generating code for file IndexList.h... +Generating code for file lagrange_functions.h... +Parsing code for file LameAssembler2D.cpp... +Generating code for file LameAssembler2D.h... +Parsing code for file LameAssembler3D.cpp... +Generating code for file LameAssembler3D.h... +Parsing code for file LapackInverseHelper.cpp... +Generating code for file LapackInverseHelper.h... +Parsing code for file Mesh_addPoints.cpp... +Parsing code for file Mesh_distributeByRankOfDOF.cpp... +Parsing code for file Mesh_findMatchingFaces.cpp... +Parsing code for file Mesh_getPasoPattern.cpp... +Parsing code for file Mesh_getPattern.cpp... +Parsing code for file Mesh_getTrilinosGraph.cpp... +Parsing code for file Mesh_glueFaces.cpp... +Parsing code for file Mesh_hex20.cpp... +Parsing code for file Mesh_hex8.cpp... +Parsing code for file Mesh_joinFaces.cpp... +Parsing code for file Mesh_merge.cpp... +Parsing code for file Mesh_optimizeDOFDistribution.cpp... +Parsing code for file Mesh_optimizeDOFDistribution.cpp... +Parsing code for file Mesh_optimizeDOFLabeling.cpp... +Parsing code for file Mesh_read.cpp... +Parsing code for file Mesh_read.cpp... +Parsing code for file Mesh_readGmsh.cpp... +Parsing code for file Mesh_readGmsh.cpp... +Parsing code for file Mesh_rec4.cpp... +Parsing code for file Mesh_rec8.cpp... +Parsing code for file Mesh_resolveNodeIds.cpp... +Parsing code for file Mesh_tet4.cpp... +Parsing code for file Mesh_tri3.cpp... +Parsing code for file Mesh_write.cpp... +Parsing code for file Mesh_write.cpp... +Parsing code for file MINRES.cpp... +Parsing code for file MKL.cpp... +Generating code for file MKL.h... +Parsing code for file mmio.cpp... +Generating code for file mmio.h... +Parsing code for file MPIDataReducer.cpp... +Generating code for file MPIDataReducer.h... +Parsing code for file MPIScalarReducer.cpp... +Generating code for file MPIScalarReducer.h... +Parsing code for file MultiBrick.cpp... +Generating code for file MultiBrick.h... +Parsing code for file MultiRectangle.cpp... +Generating code for file MultiRectangle.h... +Parsing code for file MUMPS.cpp... +Generating code for file MUMPS.h... +Parsing code for file NCHelper.cpp... +Generating code for file NCHelper.h... +Parsing code for file NewtonGMRES.cpp... +Generating code for file NodeData.h... +Parsing code for file NodeFile.cpp... +Parsing code for file NodeFile.cpp... +Generating code for file NodeFile.h... +Generating code for file NodeFile.h... +Parsing code for file NodeFile_createDenseLabelings.cpp... +Parsing code for file NodeFile_createMappings.cpp... +Parsing code for file NodeFile_createTrilinosGraph.cpp... +Parsing code for file NodeFile_gather.cpp... +Generating code for file NodeMapping.h... +Generating code for file NodeMapping.h... +Parsing code for file NonReducedVariable.cpp... +Generating code for file NonReducedVariable.h... +Parsing code for file NullDomain.cpp... +Generating code for file NullDomain.h... +Parsing code for file Options.cpp... +Generating code for file Options.h... +Generating code for file Paso.h... +Generating code for file PasoException.h... +Parsing code for file PasoUtil.cpp... +Generating code for file PasoUtil.h... +Parsing code for file Pattern.cpp... +Generating code for file Pattern.h... +Parsing code for file Pattern_mis.cpp... +Parsing code for file Pattern_reduceBandwidth.cpp... +Parsing code for file PCG.cpp... +Parsing code for file performance.cpp... +Generating code for fi [112 ])>]) [35 LaTeX Warning: Citation `Muhlhaus2005' on page 113 undefined on input line 28. @@ -7650,18 +7884,7 @@ LaTeX Warning: Reference `IKM-EQU-2' on page 113 undefined on input line 61. -[113] - -LaTeX Warning: Citation `ESCRIPT' on page 16 undefined on input line 278. - - -LaTeX Warning: Citation `ESCRIPTONLINE' on page 16 undefined on input line 278. - - - -LaTeX Warning: Citation `Telford1990a' on page 16 undefined on input line 282. - -(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1ptm.fd) +[113] [36]] [37 LaTeX Warning: Reference `IKM-EQU-3' on page 114 undefined on input line 91. @@ -7690,21 +7913,14 @@ LaTeX Warning: Reference `IKM-EQU-45' on page 114 undefined on input line 158. -[114] - -LaTeX Warning: Citation `Telford1990a' on page 16 undefined on input line 290. - -[16] - -LaTeX Warning: Citation `ERMAPPER' on page 17 undefined on input line 327. - - -LaTeX Warning: Citation `NETCDF' on page 17 undefined on input line 327. - +[114] [38] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/In +troPart2.tex] +Chapter 5. -LaTeX Warning: Citation `NETCDF' on page 17 undefined on input line 336. +LaTeX Warning: Citation `ESCRIPT' on page 39 undefined on input line 54. -[17 +[39 LaTeX Warning: Citation `LBB' on page 115 undefined on input line 206. @@ -7717,7 +7933,14 @@ (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/faultsy -stem.tex [18] +stem.tex + +LaTeX Warning: Citation `ESCRIPT' on page 40 undefined on input line 79. + + +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Dr +ivers.tex [40 ] LaTeX Warning: Reference `FAULTSYSTEM2D' on page 116 undefined on input line 39 . @@ -7732,13 +7955,24 @@ LaTeX Warning: Reference `eq:2D line 1' on page 117 undefined on input line 144 . -[117] +[117 + +LaTeX Warning: Citation `Nocedal1980' on page 41 undefined on input line 71. + +[41]] LaTeX Warning: Reference `eq:2D line 3' on page 118 undefined on input line 169 . [118] +LaTeX Warning: Citation `Nocedal1980' on page 42 undefined on input line 124. + + +LaTeX Warning: Citation `Nocedal1980' on page 42 undefined on input line 182. + +[42])) [43 + LaTeX Warning: Reference `eq:2D line 3' on page 119 undefined on input line 307 . @@ -7747,6 +7981,8 @@ 7. [119] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Do +mains.tex [44]] LaTeX Warning: Reference `eq:2D line 3' on page 120 undefined on input line 325 . @@ -7761,6 +7997,13 @@ )) [120] (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/finley. tex +Chapter 6. + +LaTeX Warning: Citation `Featherstone2008a' on page 45 undefined on input line +48. + +[45] [46 ] [47 > ] [21 ] +eyMacroLeg.pdf>> ]] LaTeX Warning: Citation `GMSH' on page 128 undefined on input line 444. LaTeX Warning: Citation `GMSH' on page 128 undefined on input line 456. -[128]) [129] +[128]) +Underfull \hbox (badness 10000) in paragraph at lines 261--261 +[][][]\OT1/ptm/m/n/8 In gen-eral any or-thog-o-nal co-or-di-nate trans-for-ma-t +ion can be sup-ported by build-ing sub-classes of the +[48 [129]] (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/ripley. -tex [22 ] LaTeX Warning: Reference `fig:ripleyrect' on page 133 undefined on input line 1 57. -) [133] +)] + +LaTeX Warning: Citation `Nocedal1980' on page 53 undefined on input line 215. + +(/usr/share/texlive/texmf-dist/tex/latex/psnfss/omsptm.fd [133] (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/speckle -y.tex [134] +y.tex) [53 [134]] + +LaTeX Warning: Citation `Nocedal2006' on page 54 undefined on input line 256. + + +LaTeX Warning: Citation `MoreThuente1992' on page 54 undefined on input line 25 +7. + +) [54] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Co +stFunctions.tex +Chapter 8. +[55] + +LaTeX Warning: Citation `ESCRIPT' on page 56 undefined on input line 83. + +[56] [57] [58 Chapter 9. LaTeX Warning: Reference `SPECKLEY:FIG:MESHES' on page 135 undefined on input l ine 56. -[135]) [136 ]> +.png (PNG copy)>] [59] (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/weipa.t -ex] +ex) [60] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Da +taSources.tex Chapter 10. LaTeX Warning: Reference `sec:weipafuncs' on page 137 undefined on input line 3 @@ -7934,7 +8177,10 @@ LaTeX Warning: Citation `GOCAD' on page 138 undefined on input line 136. -[138] +[138 +Chapter 9. +[61 ]] [62 LaTeX Warning: Citation `VisIt' on page 139 undefined on input line 174. @@ -7942,9 +8188,24 @@ LaTeX Warning: Reference `ELASTIC CHAP' on page 139 undefined on input line 182 . -[139]) [140] +[139] + +LaTeX Warning: Citation `ESCRIPT' on page 63 undefined on input line 158. + +[63]] + +LaTeX Warning: Citation `ERMAPPER' on page 64 undefined on input line 277. + +[64)] [140] (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/trilino s.tex + +LaTeX Warning: Citation `NETCDF' on page 65 undefined on input line 318. + + +LaTeX Warning: Citation `matplotlib' on page 65 undefined on input line 328. + +[65]) Chapter 11. LaTeX Warning: Citation `TrilinosWeb' on page 141 undefined on input line 18. @@ -7958,29 +8219,31 @@ LaTeX Warning: Reference `simplemesh' on page 141 undefined on input line 33. -[141] -Overfull \hbox (24.65349pt too wide) in paragraph at lines 85--88 -\OT1/ptm/m/n/10 This re-verse spline op-tion un-for-tu-nately does not work for - the [][]\OT1/pcr/m/n/10 getLoopCoords []\OT1/ptm/m/n/10 com-mand, how-ever, th -e [] +[141 [66]] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Re +gularization.tex +Chapter 10. -LaTeX Warning: Reference `fig:anticlinetemp' on page 42 undefined on input line - 127. +LaTeX Warning: Citation `GALLARDO2005a' on page 67 undefined on input line 28. -[42] [43pdfTeX warning (ext4): destination with the same identifier (name{figur -e.4.5}) has been already used, duplicate ignored - ...shipout:D \box_use:N \l_shipout_box - -l.134 \clearpage - ] +[67] [68]) [69] LaTeX Warning: Reference `basic' on page 142 undefined on input line 84. LaTeX Warning: Reference `basic' on page 142 undefined on input line 114. -[142]) [23] +[142 +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Ma +pping.tex [70]] +Chapter 11. +[71]) [72] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Fo +rwardModels.tex +Chapter 12. + +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Fo +rwardGravity.tex LaTeX Warning: Reference `basic' on page 143 undefined on input line 124. @@ -7994,8 +8257,6 @@ LaTeX Warning: Citation `Briggs2000' on page 143 undefined on input line 164. [143] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Co -okMagnetic.tex [24] LaTeX Warning: Citation `Briggs2000' on page 144 undefined on input line 188. @@ -8019,369 +8280,31 @@ LaTeX Warning: Reference `basicAMG' on page 144 undefined on input line 206. -[144]>]ile FinleyVersion.h... -Parsing code for file FluxLimiter.cpp... -Generating code for file FluxLimiter.h... -Parsing code for file Functions.cpp... -Generating code for file Functions.h... -Parsing code for file FunctionSpace.cpp... -Generating code for file FunctionSpace.h... -Generating code for file FunctionSpaceException.h... -Parsing code for file FunctionSpaceFactory.cpp... -Generating code for file FunctionSpaceFactory.h... -Parsing code for file GMRES.cpp... -Parsing code for file GMRES2.cpp... -Parsing code for file ILU.cpp... -Generating code for file index.h... -Parsing code for file IndexList.cpp... -Parsing code for file IndexList.cpp... -Generating code for file IndexList.h... -Generating code for file IndexList.h... -Generating code for file IndexList.h... -Generating code for file lagrange_functions.h... -Parsing code for file LameAssembler2D.cpp... -Generating code for file LameAssembler2D.h... -Parsing code for file LameAssembler3D.cpp... -Generating code for file LameAssembler3D.h... -Parsing code for file LapackInverseHelper.cpp... -Generating code for file LapackInverseHelper.h... -Parsing code for file Mesh_addPoints.cpp... -Parsing code for file Mesh_distributeByRankOfDOF.cpp... -Parsing code for file Mesh_findMatchingFaces.cpp... -Parsing code for file Mesh_getPasoPattern.cpp... -Parsing code for file Mesh_getPattern.cpp... -Parsing code for file Mesh_getTrilinosGraph.cpp... -Parsing code for file Mesh_glueFaces.cpp... -Parsing code for file Mesh_hex20.cpp... -Parsing code for file Mesh_hex8.cpp... -Parsing code for file Mesh_joinFaces.cpp... -Parsing code for file Mesh_merge.cpp... -Parsing code for file Mesh_optimizeDOFDistribution.cpp... -Parsing code for file Mesh_optimizeDOFDistribution.cpp... -Parsing code for file Mesh_optimizeDOFLabeling.cpp... -Parsing code for file Mesh_read.cpp... -Parsing code for file Mesh_read.cpp... -Parsing code for file Mesh_readGmsh.cpp... -Parsing code for file Mesh_readGmsh.cpp... -Parsing code for file Mesh_rec4.cpp... -Parsing code for file Mesh_rec8.cpp... -Parsing code for file Mesh_resolveNodeIds.cpp... -Parsing code for file Mesh_tet4.cpp... -Parsing code for file Mesh_tri3.cpp... -Parsing code for file Mesh_write.cpp... -Parsing code for file Mesh_write.cpp... -Parsing code for file MINRES.cpp... -Parsing code for file MKL.cpp... -Generating code for file MKL.h... -Parsing code for file mmio.cpp... -Generating code for file mmio.h... -Parsing code for file MPIDataReducer.cpp... -Generating code for file MPIDataReducer.h... -Parsing code for file MPIScalarReducer.cpp... -Generating code for file MPIScalarReducer.h... -Parsing code for file MultiBrick.cpp... -Generating code for file MultiBrick.h... -Parsing code for file MultiRectangle.cpp... -Generating code for file MultiRectangle.h... -Parsing code for file MUMPS.cpp... -Generating code for file MUMPS.h... -Parsing code for file NCHelper.cpp... -Generating code for file NCHelper.h... -Parsing code for file NewtonGMRES.cpp... -Generating code for file NodeData.h... -Parsing code for file NodeFile.cpp... -Parsing code for file NodeFile.cpp... -Generating code for file NodeFile.h... -Generating code for file NodeFile.h... -Parsing code for file NodeFile_createDenseLabelings.cpp... -Parsing code for file NodeFile_createMappings.cpp... -Parsing code for file NodeFile_createTrilinosGraph.cpp... -Parsing code for file NodeFile_gather.cpp... -Generating code for file NodeMapping.h... -Generating code for file NodeMapping.h... -Parsing code for file NonReducedVariable.cpp... -Generating code for file NonReducedVariable.h... -Parsing code for file NullDomain.cpp... -Generating code for file NullDomain.h... -Parsing code for file Options.cpp... -Generating code for file Options.h... -Generating code for file Paso.h... -Generating code for file PasoException.h... -Parsing code for file PasoUtil.cpp... -Generating code for file PasoUtil.h... -Parsing code for file Pattern.cpp... -Generating code for file Pattern.h... -Parsing code for file Pattern_mis.cpp... -Parsing code for file Pattern_reduceBandwidth.cpp... -Parsing code for file PCG.cpp... -Parsing code for file performance.cpp... -Generating code for fi [145] -Underfull \hbox (badness 10000) in paragraph at lines 137--142 +[144 [73] [74]]) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Fo +rwardMagnetic.tex +LaTeX Warning: Citation `IGRF' on page 75 undefined on input line 34. -LaTeX Warning: Reference `figs:dps' on page 44 undefined on input line 179. -[44] [45pdfTeX warning (ext4): destination with the same identifier (name{figur -e.4.6}) has been already used, duplicate ignored - ...shipout:D \box_use:N \l_shipout_box - -l.199 \clearpage - ]>] - -LaTeX Warning: Reference `isovsaniso' on page 153 undefined on input line 185. - - -LaTeX Warning: `!h' float specifier changed to `!ht'. - -[153] [154 ] [29 ] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Co -okJointDUMMY.tex [30] -Chapter 3. -) [31] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Co -okDcRes.tex [32] - -LaTeX Warning: Reference `fig:hr001qumodel' on page 46 undefined on input line -204. - - -Underfull \hbox (badness 10000) in paragraph at lines 202--209 - - -LaTeX Warning: Reference `Sec:2DHD plot' on page 46 undefined on input line 210 -. - - -Overfull \hbox (5.0533pt too wide) in paragraph at lines 210--216 -[]\OT1/ptm/m/n/10 Contours have al-ready been dis-cussed in Sec-tion []. To sho -w sub-domains, we need to go back to [] - -LaTeX Warning: Reference `fig:hr001qumodel' on page 46 undefined on input line -284. - -[46] [47pdfTeX warning (ext4): destination with the same identifier (name{figur -e.4.7}) has been already used, duplicate ignored - ...shipout:D \box_use:N \l_shipout_box - -l.291 \clearpage - -]) [35] [36] [37] [38] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/In -troPart2.tex -Chapter 5. - -LaTeX Warning: Citation `ESCRIPT' on page 39 undefined on input line 54. - -[39] - -LaTeX Warning: Citation `ESCRIPT' on page 40 undefined on input line 79. - - -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Dr -ivers.tex [40 ]>] - -LaTeX Warning: Citation `Nocedal1980' on page 41 undefined on input line 71. - -[41] [155]) [156] - -LaTeX Warning: Citation `Nocedal1980' on page 42 undefined on input line 124. - - -LaTeX Warning: Citation `Nocedal1980' on page 42 undefined on input line 182. - -[42] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/subworl -ds.tex)) [43] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Do -mains.tex [44] -Chapter 13. -[157] -Chapter 6. - -LaTeX Warning: Citation `Featherstone2008a' on page 45 undefined on input line -48. - -[45] [46 ] - -LaTeX Warning: Reference `splitworldClass' on page 158 undefined on input line -82. - -[158] [47 + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' - 36 | BOOST_PRAGMA_MESSAGE( - | ^~~~~~~~~~~~~~~~~~~~ - -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/changes -.tex [161] [162] -Appendix B. -[163] [164] [165]/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' - 13 | BOOST_HEADER_DEPRECATED("") - | ^~~~~~~~~~~~~~~~~~~~~~~ - [166]>] [167] - -LaTeX Warning: Reference `sec:interpolation' on page 168 undefined on input lin -e 228. - -[168] -Underfull \hbox (badness 10000) in paragraph at lines 261--261 -[][][]\OT1/ptm/m/n/8 In gen-eral any or-thog-o-nal co-or-di-nate trans-for-ma-t -ion can be sup-ported by build-ing sub-classes of the -[48] - -LaTeX Warning: Reference `sec:lazy' on page 169 undefined on input line 284. - - -LaTeX Warning: Reference `sec:savedatacsv' on page 169 undefined on input line -289. - -[169]) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/complet -edevs.tex [170] -Appendix C. -) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/ourrefs -.tex [171] [172] -Appendix D. -(/usr/share/texlive/texmf-dist/tex/latex/listings/lstlang1.sty [49]) [50] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Mi -nimization.tex) -(/usr/share/texlive/texmf-dist/tex/latex/listings/lstlang2.sty -Chapter 7. +[146]]) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Fo +rwardSelfMagnetic.tex -LaTeX Warning: Citation `Nocedal1980' on page 51 undefined on input line 40. +LaTeX Warning: Citation `Lelievre2006a' on page 80 undefined on input line 21. -[51]) -(/usr/share/texlive/texmf-dist/tex/latex/listings/lstlang3.sty [52)]le performance.h... +[80]le performance.h... Generating code for file Pointers.h... Parsing code for file Preconditioner.cpp... Generating code for file Preconditioner.h... @@ -8473,106 +8396,75 @@ Parsing code for file SystemMatrixPattern.cpp... Generating code for file SystemMatrixPattern.h... Parsing code for file SystemMatrixPattern_unrollBlocks.cpp... -Parsing code for f - -LaTeX Warning: Citation `Nocedal1980' on page 53 undefined on input line 215. - -(/usr/share/texlive/texmf-dist/tex/latex/psnfss/omsptm.fd) [53] - -LaTeX Warning: Citation `Nocedal2006' on page 54 undefined on input line 256. - +Parsing code for f [81]) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Fo +rward2DMTTEMode.tex -LaTeX Warning: Citation `MoreThuente1992' on page 54 undefined on input line 25 -7. +LaTeX Warning: Citation `chave2012magnetotelluric' on page 82 undefined on inpu +t line 18. -) [54] [173 -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Co -stFunctions.tex]) -Chapter 8. -[55 -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/py3.tex -][174]> +[82] [147] [83]) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Fo +rwardDCRES.tex [84]> -LaTeX Warning: Citation `ESCRIPT' on page 56 undefined on input line 83. +LaTeX Warning: Citation `rucker2006three' on page 85 undefined on input line 32 +. -[56 -Appendix E. -))] [175]In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, - from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, - from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, - from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, - from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, - from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, - from /usr/include/boost/shared_ptr.hpp:17, - from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12, - from /usr/include/boost/python/converter/arg_to_python.hpp:15, - from /usr/include/boost/python/call.hpp:15, - from /usr/include/boost/python/object_core.hpp:14, - from /usr/include/boost/python/extract.hpp:16, - from debian/stage3/include/escript/WrappedArray.h:25, - from debian/stage3/include/escript/DataVectorAlt.h:26, - from debian/stage3/include/escript/DataVector.h:24, - from debian/stage3/include/escript/DataAbstract.h:23, - from debian/stage3/include/escript/Data.h:24, - from dudley/src/Dudley.h:31, - from dudley/src/Assemble.h:27, - from dudley/src/Assemble_getAssembleParameters.cpp:24: -/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' - 36 | BOOST_PRAGMA_MESSAGE( - | ^~~~~~~~~~~~~~~~~~~~ - [176] [57] -No file user.ind. -No file user.bbl. -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/user.au -x] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/Tutoria -lPDE.aux) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/execute -.aux) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/escript -.aux [58) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/linearP -DE.aux]) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/pycad.a -ux)/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' - 13 | BOOST_HEADER_DEPRECATED("") - | ^~~~~~~~~~~~~~~~~~~~~~~ +LaTeX Warning: Citation `LOKE2014' on page 85 undefined on input line 62. -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/Models. -aux) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/finley. -aux [59) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/ripley. -aux)]) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/speckle -y.aux) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/weipa.a -ux [60)] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/trilino -s.aux) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/symboli -c.aux) +[85]] -LaTeX Warning: Reference `fig:hr002qumodel' on page 48 undefined on input line -297. +LaTeX Warning: Citation `LOKE2014' on page 86 undefined on input line 124. +[86])) [87] [88] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/in +version.ind [89]) [90 [148]] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/in +version.bbl [91]) [92] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/in +version.aux +Overfull \hbox (24.65349pt too wide) in paragraph at lines 85--88 +\OT1/ptm/m/n/10 This re-verse spline op-tion un-for-tu-nately does not work for + the [][]\OT1/pcr/m/n/10 getLoopCoords []\OT1/ptm/m/n/10 com-mand, how-ever, th +e [] -Underfull \hbox (badness 10000) in paragraph at lines 294--299 +LaTeX Warning: Reference `fig:anticlinetemp' on page 42 undefined on input line + 127. -[48 -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/subworl -ds.auxpdfTeX warning (ext4): destination with the same identifier (name{figure.4.8 -}) has been already used, duplicate ignored +[42 +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/in +tro.aux) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Co +okGravity.aux) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Co +okMagnetic.aux)] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Co +okJointDUMMY.aux [43pdfTeX warning (ext4): destination with the same identifier (name{figur +e.4.5}) has been already used, duplicate ignored ...shipout:D \box_use:N \l_shipout_box -l.305 \clearpage +l.134 \clearpage + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' - 36 | BOOST_PRAGMA_MESSAGE( - | ^~~~~~~~~~~~~~~~~~~~ -> -Chapter 9. -[61]>/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' - 13 | BOOST_HEADER_DEPRECATED("") - | ^~~~~~~~~~~~~~~~~~~~~~~ - [62 +fonts/cm/cmr7.pfb> -LaTeX Warning: Citation `ESCRIPT' on page 63 undefined on input line 158. +LaTeX Warning: Reference `simplebob' on page 149 undefined on input line 422. -[63< -/usr/share/texlive/texmf-dist/fonts/type1/urw/helvetic/uhvr8a.pfb>]>< [150] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/symboli +c.tex/usr/share/texlive/texmf-dist/fonts/type1/urw/helvetic/uhvr8a.pfb> + +Chapter 12. -[65>) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Re -gularization.tex -Chapter 10. +LaTeX Warning: Citation `Sympy' on page 151 undefined on input line 20. -LaTeX Warning: Citation `GALLARDO2005a' on page 67 undefined on input line 28. -[67] [68 -Output written on user.pdf (176 pages, 2592765 bytes). -Transcript written on user.log. -]) [69] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Ma -pping.tex [70]cd debian/tmp3/posix/doc/user && bibtex user +Underfull \vbox (badness 10000) has occurred while \output is active [151 +Output written on inversion.pdf (92 pages, 5273948 bytes). +Transcript written on inversion.log. -Chapter 11. -[71]) [72] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Fo -rwardModels.tex -Chapter 12. -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Fo -rwardGravity.tex [73] [74]) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Fo -rwardMagnetic.tex +LaTeX Warning: Reference `symbolic eq1' on page 152 undefined on input line 72. -LaTeX Warning: Citation `IGRF' on page 75 undefined on input line 34. -LaTeX Warning: Citation `AGRF' on page 75 undefined on input line 35. +LaTeX Warning: Reference `symbolic eq1' on page 152 undefined on input line 74. -[75]In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, - from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, - from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, - from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, - from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, - from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, - from /usr/include/boost/shared_ptr.hpp:17, - from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12, - from /usr/include/boost/python/converter/arg_to_python.hpp:15, - from /usr/include/boost/python/call.hpp:15, - from /usr/include/boost/python/object_core.hpp:14, - from /usr/include/boost/python/extract.hpp:16, - from debian/stage3/include/escript/WrappedArray.h:25, - from debian/stage3/include/escript/DataVectorAlt.h:26, - from debian/stage3/include/escript/DataVector.h:24, - from debian/stage3/include/escript/DataAbstract.h:23, - from debian/stage3/include/escript/Data.h:24, - from dudley/src/Dudley.h:31, - from dudley/src/Assemble.h:27, - from dudley/src/Assemble_PDE_Single_3D.cpp:38: -/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' - 36 | BOOST_PRAGMA_MESSAGE( - | ^~~~~~~~~~~~~~~~~~~~ - [76] [77/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' - 13 | BOOST_HEADER_DEPRECATED("") - | ^~~~~~~~~~~~~~~~~~~~~~~ -]) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Fo -rwardMagneticIntensity.tex [78This is BibTeX, Version 0.99d (TeX Live 2020/Debian) -The top-level auxiliary file: user.aux -The style file: plain.bst -Database file #1: esys.bib -] [79ile Taipan.cpp... + + +LaTeX Warning: Reference `symbolic eq1' on page 152 undefined on input line 75. + + + +LaTeX Warning: Reference `SEC LinearPDE' on page 152 undefined on input line 80 +. + + +LaTeX Warning: Reference `symbolic eq2' on page 152 undefined on input line 87. + + +[152] +Underfull \hbox (badness 10000) in paragraph at lines 137--142 + + +LaTeX Warning: Reference `figs:dps' on page 44 undefined on input line 179. + +[44cd debian/tmp3/posix/doc/inversion && pdflatex -interaction=nonstopmode -recorder -interaction=nonstopmode \\newcommand{\\RepVersion}{-2\\xspace}\\input{inversion.tex} inversion.tex +] [45pdfTeX warning (ext4): destination with the same identifier (name{figur +e.4.6}) has been already used, duplicate ignored + ...shipout:D \box_use:N \l_shipout_box + +l.199 \clearpage + entering extended mode +LaTeX2e <2020-10-01> patch level 4 +L3 programming layer <2021-01-09> +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/in +version.tex +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/es +ysdoc.cls +Document Class: esysdoc +(/usr/share/texlive/texmf-dist/tex/latex/base/book.cls +Document Class: book 2020/04/10 v1.4m Standard LaTeX document class +(/usr/share/texlive/texmf-dist/tex/latex/base/bk10.clo)> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' - 36 | BOOST_PRAGMA_MESSAGE( - | ^~~~~~~~~~~~~~~~~~~~ - - -LaTeX Warning: Citation `Lelievre2006a' on page 80 undefined on input line 21. - -[80] [81/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' - 13 | BOOST_HEADER_DEPRECATED("") - | ^~~~~~~~~~~~~~~~~~~~~~~ -]) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Fo -rward2DMTTEMode.tex - -LaTeX Warning: Citation `chave2012magnetotelluric' on page 82 undefined on inpu -t line 18. - -[82] [83]) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Fo -rwardDCRES.tex [84nerating docs for file Assemble_PDE_Single_3D.cpp... +Ge +(/usr/share/texlive/texmf-dist/tex/latex/listings/listings.sty +(/usr/share/texlive/texmf-dist/tex/latex/listings/lstmisc.sty>) +(/usr/share/texlive/texmf-dist/tex/latex/listings/listings.cfg) +(/usr/share/texlive/texmf-dist/tex/latex/graphics/trig.sty) +(/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/graphics.cfg)> ] +(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amsfonts.sty) +(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amssymb.sty [155]))istributeByRankOfDOF.cpp... Generating docs for file ElementFile_jacobians.cpp... Generating docs for file ElementFile_jacobians.cpp... Generating docs for file ElementType.h... @@ -9070,61 +8896,18 @@ Generating docs for file MPIScalarReducer.cpp... Generating docs for file MPIScalarReducer.h... Generating docs for file MultiBrick.cpp... -Generating docs for -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Co -okDcRes.aux) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/In -troPart2.aux) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Do -mains.aux) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Mi -nimization.aux) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Co -stFunctions.aux) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Da -taSources.auxcd debian/tmp3/posix/doc/user && pdflatex -interaction=nonstopmode -recorder -interaction=nonstopmode \\newcommand{\\RepVersion}{-2\\xspace}\\input{user.tex} user.tex -) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Re -gularization.aux) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Ma -pping.aux) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Fo -rwardModels.aux)) - -LaTeX Warning: There were undefined references. - - -LaTeX Warning: Label(s) may have changed. Rerun to get cross-references right. - - -Package rerunfilecheck Warning: File `inversion.out' has changed. -(rerunfilecheck) Rerun to get outlines right -(rerunfilecheck) or use package `bookmark'. - - ) -(see the transcript file for additional information){/usr/share/texlive/texmf-d -ist/fonts/enc/dvips/base/8r.enc} +(/usr/share/texlive/texmf-dist/tex/latex/hyperref/hyperref.sty] +(/usr/share/texlive/texmf-dist/tex/generic/ltxcmds/ltxcmds.sty) +(/usr/share/texlive/texmf-dist/tex/generic/pdftexcmds/pdftexcmds.sty +Chapter 13. +[157 +(/usr/share/texlive/texmf-dist/tex/generic/infwarerr/infwarerr.sty)]) +(/usr/share/texlive/texmf-dist/tex/generic/kvsetkeys/kvsetkeys.sty) +(/usr/share/texlive/texmf-dist/tex/generic/kvdefinekeys/kvdefinekeys.sty)file MultiBrick.h... Generating docs for file MultiRectangle.cpp... Generating docs for file MultiRectangle.h... Generating docs for file MUMPS.cpp... @@ -9216,99 +8999,166 @@ Generating docs for file SparseMatrix_MatrixMatrixTranspose.cpp... Generating docs for file SparseMatrix_MatrixVector.cpp... Generating docs for file SparseMatrix_nullifyRowsAndCols.cpp... -Generating docs > - + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' - 36 | BOOST_PRAGMA_MESSAGE( - | ^~~~~~~~~~~~~~~~~~~~ -> -Output written on inversion.pdf (92 pages, 5273573 bytes). -Transcript written on inversion.log. -/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' - 13 | BOOST_HEADER_DEPRECATED("") - | ^~~~~~~~~~~~~~~~~~~~~~~ -This is pdfTeX, Version 3.14159265-2.6-1.40.21 (TeX Live 2020/Debian) (preloaded format=pdflatex) - restricted \write18 enabled. -cd debian/tmp3/posix/doc/inversion && pdflatex -interaction=nonstopmode -recorder -interaction=nonstopmode \\newcommand{\\RepVersion}{-2\\xspace}\\input{inversion.tex} inversion.tex -/build/reproducible-path/python-escript-5.6/dudley/src/DomainFactory.cpp:689: warning: The following parameters of dudley::brick(escript::JMPI jmpi, dim_t n0=1, dim_t n1=1, dim_t n2=1, int order=1, double l0=1.0, double l1=1.0, double l2=1.0, bool periodic0=false, bool periodic1=false, bool periodic2=false, int integrationOrder=-1, int reducedIntegrationOrder=-1, bool useElementsOnFace=false, bool useFullElementOrder=false, bool optimize=false) are not documented: +Generating docs +(/usr/share/texlive/texmf-dist/tex/generic/pdfescape/pdfescape.sty) +(/usr/share/texlive/texmf-dist/tex/latex/hycolor/hycolor.sty) + +LaTeX Warning: Reference `splitworldClass' on page 158 undefined on input line +82. + +[158] +(/usr/share/texlive/texmf-dist/tex/latex/letltxmacro/letltxmacro.sty) +(/usr/share/texlive/texmf-dist/tex/latex/auxhook/auxhook.sty + +LaTeX Warning: Reference `fig:hr001qumodel' on page 46 undefined on input line +204. + + +Underfull \hbox (badness 10000) in paragraph at lines 202--209 + + +LaTeX Warning: Reference `Sec:2DHD plot' on page 46 undefined on input line 210 +. + + +Overfull \hbox (5.0533pt too wide) in paragraph at lines 210--216 +[]\OT1/ptm/m/n/10 Contours have al-ready been dis-cussed in Sec-tion []. To sho +w sub-domains, we need to go back to [] + +LaTeX Warning: Reference `fig:hr001qumodel' on page 46 undefined on input line +284. + +[46)] +(/usr/share/texlive/texmf-dist/tex/latex/kvoptions/kvoptions.sty [47pdfTeX warning (ext4): destination with the same identifier (name{figur +e.4.7}) has been already used, duplicate ignored + ...shipout:D \box_use:N \l_shipout_box + +l.291 \clearpage + patch level 4 -L3 programming layer <2021-01-09> xparse <2020-03-03> -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/user.te -xentering extended mode -LaTeX2e <2020-10-01> patch level 4 -L3 programming layer <2021-01-09> xparse <2020-03-03> -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/esysdoc -.cls -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/in -version.tex -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/es -ysdoc.cls -Document Class: esysdoc -(/usr/share/texlive/texmf-dist/tex/latex/base/book.cls -Document Class: book 2020/04/10 v1.4m Standard LaTeX document class -(/usr/share/texlive/texmf-dist/tex/latex/base/bk10.clo) -Document Class: esysdoc -(/usr/share/texlive/texmf-dist/tex/latex/base/book.cls) -Document Class: book 2020/04/10 v1.4m Standard LaTeX document class -(/usr/share/texlive/texmf-dist/tex/latex/base/bk10.clo) -(/usr/share/texlive/texmf-dist/tex/latex/geometry/geometry.sty -(/usr/share/texlive/texmf-dist/tex/latex/graphics/keyval.sty)) -(/usr/share/texlive/texmf-dist/tex/generic/iftex/ifvtex.sty -(/usr/share/texlive/texmf-dist/tex/latex/geometry/geometry.sty -(/usr/share/texlive/texmf-dist/tex/generic/iftex/iftex.sty))/build/reproducible-path/python-escript-5.6/escriptcore/src/DataVectorOps.h:1381: warning: argument 'shape' of command @param is not found in the argument list of escript::reductionOpVector(const DataTypes::RealVectorType &left, const DataTypes::ShapeType &leftShape, DataTypes::RealVectorType::size_type offset, BinaryFunction operation, DataTypes::real_t initial_value) -/build/reproducible-path/python-escript-5.6/escriptcore/src/DataVectorOps.h:1397: warning: The following parameter of escript::reductionOpVector(const DataTypes::RealVectorType &left, const DataTypes::ShapeType &leftShape, DataTypes::RealVectorType::size_type offset, BinaryFunction operation, DataTypes::real_t initial_value) is not documented: - parameter 'leftShape' + [166] +(/usr/share/texlive/texmf-dist/tex/latex/base/atveryend-ltx.sty [167)] +LaTeX Warning: Reference `sec:interpolation' on page 168 undefined on input lin +e 228. -Package geometry Warning: Over-specification in `h'-direction. - `width' (478.00812pt) is ignored. +[168] +(/usr/share/texlive/texmf-dist/tex/latex/rerunfilecheck/rerunfilecheck.sty -) -(/usr/share/texlive/texmf-dist/tex/latex/graphics/keyval.sty) (/usr/share/texlive/texmf-dist/tex/latex/psnfss/times.sty) -(/usr/share/texlive/texmf-dist/tex/latex/listings/listings.sty -(/usr/share/texlive/texmf-dist/tex/generic/iftex/ifvtex.sty -(/usr/share/texlive/texmf-dist/tex/latex/listings/lstmisc.sty) -(/usr/share/texlive/texmf-dist/tex/latex/listings/listings.cfg)>] -(/usr/share/texlive/texmf-dist/tex/generic/iftex/iftex.sty)))) -(/usr/share/texlive/texmf-dist/tex/generic/iftex/ifpdf.sty) -Chapter 5. +LaTeX Warning: Reference `sec:lazy' on page 169 undefined on input line 284. -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/exa -mple07.texfor file SparseMatrix_saveHB.cpp... + +LaTeX Warning: Reference `sec:savedatacsv' on page 169 undefined on input line +289. + +[169]) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/complet +edevs.tex [170 +(/usr/share/texlive/texmf-dist/tex/generic/uniquecounter/uniquecounter.sty] +Appendix C. +)))) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/ourrefs +.tex [171] [172] +(/usr/share/texlive/texmf-dist/tex/latex/oberdiek/hypcap.sty +Appendix D. +(/usr/share/texlive/texmf-dist/tex/latex/listings/lstlang1.sty) +(/usr/share/texlive/texmf-dist/tex/latex/fancyhdr/fancyhdr.sty) +(/usr/share/texlive/texmf-dist/tex/latex/fncychap/fncychap.sty))) +(/usr/share/texlive/texmf-dist/tex/latex/listings/lstlang2.sty +(/usr/share/texlive/texmf-dist/tex/latex/graphics/color.sty +(/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/color.cfg))) +\@input{elist.aux} + +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/el +ist.tex (/usr/share/texlive/texmf-dist/tex/latex/listing/listing.sty +Package `listing', V1.2, <1999/05/25> +))/build/reproducible-path/python-escript-5.6/escriptcore/src/DataVectorOps.h:1381: warning: argument 'shape' of command @param is not found in the argument list of escript::reductionOpVector(const DataTypes::RealVectorType &left, const DataTypes::ShapeType &leftShape, DataTypes::RealVectorType::size_type offset, BinaryFunction operation, DataTypes::real_t initial_value) + +(/usr/share/texlive/texmf-dist/tex/latex/listings/lstlang3.sty (/usr/share/texlive/texmf-dist/tex/latex/program/program.sty) +(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsa.fd/build/reproducible-path/python-escript-5.6/escriptcore/src/DataVectorOps.h:1397: warning: The following parameter of escript::reductionOpVector(const DataTypes::RealVectorType &left, const DataTypes::ShapeType &leftShape, DataTypes::RealVectorType::size_type offset, BinaryFunction operation, DataTypes::real_t initial_value) is not documented: + parameter 'leftShape' +) +(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsb.fd) +(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/ueur.fd)) +(/usr/share/texlive/texmf-dist/tex/latex/subfigure/subfigure.sty +**************************************** +* Local config file subfigure.cfg used * +**************************************** +(/usr/share/texlive/texmf-dist/tex/latex/subfigure/subfigure.cfg)) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/de +fs.tex) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/ve +rinfo.tex) +Writing index file inversion.idx +(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1ptm.fd) +(/usr/share/texlive/texmf-dist/tex/latex/l3backend/l3backend-pdftex.def) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/in +version.aux +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/in +tro.aux) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Co +okGravity.aux) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Co +okMagnetic.aux) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Co +okJointDUMMY.aux) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Co +okDcRes.aux) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/In +troPart2.aux) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Do +mains.aux) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Mi +nimization.aux) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Co +stFunctions.aux) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Da +taSources.aux) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Re +gularization.aux) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Ma +pping.aux) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Fo +rwardModels.aux)) [173] +*geometry* driver: auto-detecting +*geometry* detected driver: pdftex +(/usr/share/texlive/texmf-dist/tex/context/base/mkii/supp-pdf.mkii +[Loading MPS to PDF converter (version 2006.09.02).] +) (/usr/share/texlive/texmf-dist/tex/latex/epstopdf-pkg/epstopdf-base.sty) +(/usr/share/texlive/texmf-dist/tex/latex/latexconfig/epstopdf-sys.cfg)) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/py3.tex +[174] +(/usr/share/texlive/texmf-dist/tex/latex/hyperref/nameref.sty +Appendix E. +) +(/usr/share/texlive/texmf-dist/tex/latex/refcount/refcount.sty)) [175 +(/usr/share/texlive/texmf-dist/tex/generic/gettitlestring/gettitlestring.sty))] [176] +(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1phv.fd)for file SparseMatrix_saveHB.cpp... Generating docs for file Speckley.h... Generating docs for file speckleycpp.cpp... Generating docs for file SpeckleyDomain.cpp... @@ -9400,13 +9250,209 @@ Generating docs for compound escript::AbstractContinuousDomain... Generating docs for compound escript::AbstractDomain... Generati +No file user.ind. +No file user.bbl. -Package geometry Warning: Over-specification in `h'-direction. - `width' (478.00812pt) is ignored. +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/user.au +x +(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1pcr.fd) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/Tutoria +lPDE.aux [1{/var/lib/texmf/fo +nts/map/pdftex/updmap/pdftex.map)}] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/do +cguide.tex [2] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/execute +.aux) [3]) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/escript +.aux [4]) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/linearP +DE.aux +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/in +version.toc) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/pycad.a +ux [5]) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/Models. +aux) [6] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/in +tro.tex)) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/finley. +aux) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/ripley. +aux [7]) [8] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/speckle +y.aux) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/weipa.a +ux [9)] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/trilino +s.aux) [10] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/symboli +c.aux) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/subworl +ds.aux +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Co +okGravity.tex) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/appendi +x.aux)) -) -(/usr/share/texlive/texmf-dist/tex/latex/base/makeidx.sty) -(/usr/share/texlive/texmf-dist/tex/latex/url/url.sty) (/usr/share/texlive/texmf-dist/tex/latex/psnfss/times.sty) +LaTeX Warning: There were undefined references. + + +LaTeX Warning: Label(s) may have changed. Rerun to get cross-references right. + + +Package rerunfilecheck Warning: File `user.out' has changed. +(rerunfilecheck) Rerun to get outlines right +(rerunfilecheck) or use package `bookmark'. + + ) +(see the transcript file for additional information){/usr/share/texlive/texmf-d +ist/fonts/enc/dvips/base/8r.enc}< +Chapter 1. + +Underfull \hbox (badness 10000) in paragraph at lines 54--54 +[]\OT1/ptm/m/n/10 Figure 1.1: Grav-ity Anomaly Data in $\OML/cmm/m/it/10 mgal$ +\OT1/ptm/m/n/10 from West-ern Queens-land, Aus-tralia (file + +Underfull \hbox (badness 10000) in paragraph at lines 65--65 +[]\OT1/ptm/m/n/10 Figure 1.2: 3-D con-tour plot of the den-sity dis-tri-bu-tion + ob-tained by in-ver-sion of file +[11]/usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmmi10 +.pfb><)/usr/share/texlive/texmf-dist/fonts/ +type1/public/amsfonts/cm/cmr5.pfb>< [12 /build/reproducible-path/python-escript-5.6/escriptcore/src/Data.h:1600: warning: The following parameter of escript::Data::getDataAtOffsetRO(DataTypes::RealVectorType::size_type i, DataTypes::real_t dummy) is not documented: + parameter 'dummy' +<>/usr/share/texlive/texmf +-dist/fonts/type1/public/amsfonts/cm/cmsy9.pfb>/build/reproducible-path/python-escript-5.6/escriptcore/src/Data.h:654: warning: The following parameter of escript::Data::getSampleDataByTag(int tag, DataTypes::real_t dummy=0) is not documented: + parameter 'dummy' +/build/reproducible-path/python-escript-5.6/escriptcore/src/Data.h:611: warning: The following parameter of escript::Data::getSampleDataRO(DataTypes::RealVectorType::size_type sampleNo, DataTypes::real_t dummy=0) const is not documented: + parameter 'dummy' +/build/reproducible-path/python-escript-5.6/escriptcore/src/Data.h:625: warning: The following parameter of escript::Data::getSampleDataRW(DataTypes::RealVectorType::size_type sampleNo, DataTypes::real_t dummy=0) is not documented: + parameter 'dummy' +]< +/usr/share/texlive/texmf-dist/fonts/type1/urw/helvetic/uhvr8a.pfb> + +LaTeX Warning: Reference `fig:hr002qumodel' on page 48 undefined on input line +297. + + +Underfull \hbox (badness 10000) in paragraph at lines 294--299 + +[48pdfTeX warning (ext4): destination with the same identifier (name{figure.4.8 +}) has been already used, duplicate ignored + ...shipout:D \box_use:N \l_shipout_box + +l.305 \clearpage + /build/reproducible-path/python-escript-5.6/escriptcore/src/DataAbstract.h:96: warning: The following parameter of escript::DataAbstract::DataAbstract(const FunctionSpace &what, const ShapeType &shape, bool isDataEmpty=false, bool isCplx=false) is not documented: + parameter 'isCplx' +>] [13 ] +Output written on user.pdf (176 pages, 2592820 bytes). +Transcript written on user.log. + +[14] [15 ]cd debian/tmp3/posix/doc/user && bibtex user + (/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1ptm.fd) [16] [17] +[18]This is BibTeX, Version 0.99d (TeX Live 2020/Debian) +The top-level auxiliary file: user.aux +The style file: plain.bst +Database file #1: esys.bib +cd debian/tmp3/posix/doc/user && makeindex user.idx + [19] [20 ] [21 ] +[22 ]This is pdfTeX, Version 3.14159265-2.6-1.40.21 (TeX Live 2020/Debian) (preloaded format=pdflatex) + restricted \write18 enabled. +) [23] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Co +okMagnetic.tex [24]/build/reproducible-path/python-escript-5.6/escriptcore/src/DataTagged.h:419: warning: The following parameter of escript::DataTagged::getDataByTagRW(int tag, DataTypes::RealVectorType::size_type i, DataTypes::real_t dummy=0) is not documented: + parameter 'dummy' +/build/reproducible-path/python-escript-5.6/escriptcore/src/DataTagged.h:514: warning: The following parameter of escript::DataTagged::getDefaultValueRW(DataTypes::RealVectorType::size_type i, DataTypes::real_t dummy=0) is not documented: + parameter 'dummy' +entering extended mode +LaTeX2e <2020-10-01> patch level 4 +L3 programming layer <2021-01-09> xparse <2020-03-03> +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/user.te +x +Chapter 2. + +Underfull \hbox (badness 10000) in paragraph at lines 7--7 +[]\OT1/ptm/m/n/10 Figure 2.1: Mag-netic anomaly data in $\OML/cmm/m/it/10 nT$ \ +OT1/ptm/m/n/10 from West-ern Queens-land, Aus-tralia (file +[25] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/esysdoc +.cls [26 +(/usr/share/texlive/texmf-dist/tex/generic/iftex/ifvtex.sty]) +Chapter 5. + +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/exa +mple07.tex +(/usr/share/texlive/texmf-dist/tex/generic/iftex/iftex.sty LaTeX Warning: Reference `eqn:laplacian' on page 49 undefined on input line 41. @@ -9418,16 +9464,12 @@ LaTeX Warning: Reference `eqn:gradrank1' on page 49 undefined on input line 79. -[49 -(/usr/share/texlive/texmf-dist/tex/latex/tools/xspace.sty)] -(/usr/share/texlive/texmf-dist/tex/latex/graphics/graphicx.sty -(/usr/share/texlive/texmf-dist/tex/latex/listings/listings.sty -(/usr/share/texlive/texmf-dist/tex/latex/graphics/graphics.sty -(/usr/share/texlive/texmf-dist/tex/latex/graphics/trig.sty) -(/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/graphics.cfg) -(/usr/share/texlive/texmf-dist/tex/latex/graphics-def/pdftex.def/build/reproducible-path/python-escript-5.6/escriptcore/src/Data.h:1600: warning: The following parameter of escript::Data::getDataAtOffsetRO(DataTypes::RealVectorType::size_type i, DataTypes::real_t dummy) is not documented: - parameter 'dummy' +[49)) +Package geometry Warning: Over-specification in `h'-direction. + `width' (478.00812pt) is ignored. + +)] (/usr/share/texlive/texmf-dist/tex/latex/psnfss/times.sty) Underfull \hbox (badness 10000) in paragraph at lines 154--155 @@ -9440,85 +9482,62 @@ LaTeX Warning: Reference `eqn:acswave' on page 50 undefined on input line 163. -[50))])/build/reproducible-path/python-escript-5.6/escriptcore/src/Data.h:654: warning: The following parameter of escript::Data::getSampleDataByTag(int tag, DataTypes::real_t dummy=0) is not documented: - parameter 'dummy' -/build/reproducible-path/python-escript-5.6/escriptcore/src/Data.h:611: warning: The following parameter of escript::Data::getSampleDataRO(DataTypes::RealVectorType::size_type sampleNo, DataTypes::real_t dummy=0) const is not documented: - parameter 'dummy' -/build/reproducible-path/python-escript-5.6/escriptcore/src/Data.h:625: warning: The following parameter of escript::Data::getSampleDataRW(DataTypes::RealVectorType::size_type sampleNo, DataTypes::real_t dummy=0) is not documented: - parameter 'dummy' +[50] +(/usr/share/texlive/texmf-dist/tex/latex/listings/listings.sty/build/reproducible-path/python-escript-5.6/escriptcore/src/SolverOptions.h:532: warning: argument 'Hermitian' of command @param is not found in the argument list of escript::SolverBuddy::setHermitian(bool hermitian) -(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsmath.sty -(/usr/share/texlive/texmf-dist/tex/latex/listings/lstmisc.sty -For additional information on amsmath, use the `?' option. -(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amstext.sty) -(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsgen.sty -(/usr/share/texlive/texmf-dist/tex/latex/listings/listings.cfg))) -(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsbsy.sty))/build/reproducible-path/python-escript-5.6/escriptcore/src/DataAbstract.h:96: warning: The following parameter of escript::DataAbstract::DataAbstract(const FunctionSpace &what, const ShapeType &shape, bool isDataEmpty=false, bool isCplx=false) is not documented: - parameter 'isCplx' - -(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsopn.sty) -(/usr/share/texlive/texmf-dist/tex/generic/iftex/ifpdf.sty)) -(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amsfonts.sty) -(/usr/share/texlive/texmf-dist/tex/latex/base/makeidx.sty) -(/usr/share/texlive/texmf-dist/tex/latex/url/url.sty +(/usr/share/texlive/texmf-dist/tex/latex/listings/lstmisc.sty/build/reproducible-path/python-escript-5.6/escriptcore/src/SolverOptions.h:536: warning: The following parameter of escript::SolverBuddy::setHermitian(bool hermitian) is not documented: + parameter 'hermitian' +) +(/usr/share/texlive/texmf-dist/tex/latex/listings/listings.cfg)) +(/usr/share/texlive/texmf-dist/tex/generic/iftex/ifpdf.sty LaTeX Warning: Reference `fig:cxsource' on page 51 undefined on input line 241. -[51 -(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amssymb.sty])) -(/usr/share/texlive/texmf-dist/tex/latex/underscore/underscore.sty) -(/usr/share/texlive/texmf-dist/tex/latex/hyperref/hyperref.sty -(/usr/share/texlive/texmf-dist/tex/latex/tools/xspace.sty) -(/usr/share/texlive/texmf-dist/tex/generic/ltxcmds/ltxcmds.sty) -(/usr/share/texlive/texmf-dist/tex/latex/graphics/graphicx.sty -(/usr/share/texlive/texmf-dist/tex/generic/pdftexcmds/pdftexcmds.sty +[51)] +(/usr/share/texlive/texmf-dist/tex/latex/base/makeidx.sty) +(/usr/share/texlive/texmf-dist/tex/latex/url/url.sty)> Underfull \hbox (badness 10000) in paragraph at lines 279--280 Underfull \hbox (badness 10000) in paragraph at lines 279--280 -[52pdfTeX warning (ext4): destination with the same identifier (name{figure.5.1 +[52 ] +(/usr/share/texlive/texmf-dist/tex/latex/tools/xspace.sty)pdfTeX warning (ext4): destination with the same identifier (name{figure.5.1 }) has been already used, duplicate ignored ...shipout:D \box_use:N \l_shipout_box l.280 ] -(/usr/share/texlive/texmf-dist/tex/generic/bitset/bitset.sty -(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsopn.sty) -(/usr/share/texlive/texmf-dist/tex/generic/bigintcalc/bigintcalc.sty))/build/reproducible-path/python-escript-5.6/escriptcore/src/SolverOptions.h:532: warning: argument 'Hermitian' of command @param is not found in the argument list of escript::SolverBuddy::setHermitian(bool hermitian) -/build/reproducible-path/python-escript-5.6/escriptcore/src/SolverOptions.h:536: warning: The following parameter of escript::SolverBuddy::setHermitian(bool hermitian) is not documented: - parameter 'hermitian' -) -(/usr/share/texlive/texmf-dist/tex/latex/base/atbegshi-ltx.sty)) -(/usr/share/texlive/texmf-dist/tex/latex/hyperref/hpdftex.def -(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amsfonts.sty) +(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amstext.sty>]) +(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsgen.sty [27))] +(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsbsy.sty [28 ] [29 +(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsopn.sty ] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Co +okJointDUMMY.tex LaTeX Warning: Reference `eqn:waveu' on page 53 undefined on input line 284. @@ -9533,8 +9552,9 @@ LaTeX Warning: Reference `fig:ex07sampth' on page 53 undefined on input line 33 5. -[53 -(/usr/share/texlive/texmf-dist/tex/latex/base/atveryend-ltx.sty)]) [54pdfTeX warning (ext4): destination with the same identifier (name{figu +[53 [30)] +Chapter 3. +) [31]]) [54pdfTeX warning (ext4): destination with the same identifier (name{figu re.5.2}) has been already used, duplicate ignored ...shipout:D \box_use:N \l_shipout_box @@ -9543,16 +9563,20 @@ pt-5.6/debian/tmp3/posix/doc/cookbook/figures/ex07usamp.png (PNG copy)> ] -(/usr/share/texlive/texmf-dist/tex/latex/rerunfilecheck/rerunfilecheck.sty -(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amssymb.sty +3/posix/doc/cookbook/figures/ex07nsamp.png (PNG copy)>]) Chapter 6. (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/exa -mple08.tex) -(/usr/share/texlive/texmf-dist/tex/generic/uniquecounter/uniquecounter.sty))) -(/usr/share/texlive/texmf-dist/tex/latex/oberdiek/hypcap.sty) -(/usr/share/texlive/texmf-dist/tex/latex/underscore/underscore.sty) +mple08.tex +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Co +okDcRes.tex [32] +(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amsfonts.sty/build/reproducible-path/python-escript-5.6/finley/src/FinleyDomain.h:147: warning: argument 'l0' of command @param is not found in the argument list of finley::FinleyDomain::createRec4(dim_t NE0, dim_t NE1, double L0, double L1, bool periodic0, bool periodic1, int order, int reducedOrder, bool useElementsOnFace, bool optimize, escript::JMPI jmpi) +)/build/reproducible-path/python-escript-5.6/finley/src/FinleyDomain.h:147: warning: argument 'l1' of command @param is not found in the argument list of finley::FinleyDomain::createRec4(dim_t NE0, dim_t NE1, double L0, double L1, bool periodic0, bool periodic1, int order, int reducedOrder, bool useElementsOnFace, bool optimize, escript::JMPI jmpi) +/build/reproducible-path/python-escript-5.6/finley/src/FinleyDomain.h:161: warning: The following parameters of finley::FinleyDomain::createRec4(dim_t NE0, dim_t NE1, double L0, double L1, bool periodic0, bool periodic1, int order, int reducedOrder, bool useElementsOnFace, bool optimize, escript::JMPI jmpi) are not documented: + parameter 'L0' + parameter 'L1' + +(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amssymb.sty Underfull \hbox (badness 10000) in paragraph at lines 18--24 @@ -9564,23 +9588,10 @@ LaTeX Warning: Reference `eqn:sigtrans' on page 55 undefined on input line 62. -[55 -(/usr/share/texlive/texmf-dist/tex/latex/fancyhdr/fancyhdr.sty)] -(/usr/share/texlive/texmf-dist/tex/latex/hyperref/hyperref.sty -(/usr/share/texlive/texmf-dist/tex/latex/fncychap/fncychap.sty)) -(/usr/share/texlive/texmf-dist/tex/latex/graphics/color.sty -(/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/color.cfg)) -\@input{elist.aux} - -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/el -ist.tex -(/usr/share/texlive/texmf-dist/tex/generic/ltxcmds/ltxcmds.sty) (/usr/share/texlive/texmf-dist/tex/latex/listing/listing.sty -Package `listing', V1.2, <1999/05/25> -)) (/usr/share/texlive/texmf-dist/tex/latex/program/program.sty -(/usr/share/texlive/texmf-dist/tex/generic/pdftexcmds/pdftexcmds.sty -(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsa.fd) -(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsb.fd) -(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/ueur.fd)) +[55]) +Chapter 4. +[33] +(/usr/share/texlive/texmf-dist/tex/latex/underscore/underscore.sty LaTeX Warning: Reference `tab:wpcores' on page 56 undefined on input line 116. @@ -9592,64 +9603,12 @@ ...shipout:D \box_use:N \l_shipout_box l.153 # - ###########################################FIRST TIME STEPS AND SOURCE] -(/usr/share/texlive/texmf-dist/tex/generic/infwarerr/infwarerr.sty) -(/usr/share/texlive/texmf-dist/tex/latex/subfigure/subfigure.sty) -**************************************** -* Local config file subfigure.cfg used * -**************************************** -(/usr/share/texlive/texmf-dist/tex/latex/subfigure/subfigure.cfg)) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/de -fs.tex)/build/reproducible-path/python-escript-5.6/finley/src/FinleyDomain.h:147: warning: argument 'l0' of command @param is not found in the argument list of finley::FinleyDomain::createRec4(dim_t NE0, dim_t NE1, double L0, double L1, bool periodic0, bool periodic1, int order, int reducedOrder, bool useElementsOnFace, bool optimize, escript::JMPI jmpi) -/build/reproducible-path/python-escript-5.6/finley/src/FinleyDomain.h:147: warning: argument 'l1' of command @param is not found in the argument list of finley::FinleyDomain::createRec4(dim_t NE0, dim_t NE1, double L0, double L1, bool periodic0, bool periodic1, int order, int reducedOrder, bool useElementsOnFace, bool optimize, escript::JMPI jmpi) -/build/reproducible-path/python-escript-5.6/finley/src/FinleyDomain.h:161: warning: The following parameters of finley::FinleyDomain::createRec4(dim_t NE0, dim_t NE1, double L0, double L1, bool periodic0, bool periodic1, int order, int reducedOrder, bool useElementsOnFace, bool optimize, escript::JMPI jmpi) are not documented: - parameter 'L0' - parameter 'L1' - -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/ve -rinfo.tex) -Writing index file inversion.idx -(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1ptm.fd) -(/usr/share/texlive/texmf-dist/tex/generic/kvsetkeys/kvsetkeys.sty -(/usr/share/texlive/texmf-dist/tex/latex/l3backend/l3backend-pdftex.def)) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/in -version.aux -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/in -tro.aux) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Co -okGravity.aux) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Co -okMagnetic.aux) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Co -okJointDUMMY.aux) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Co -okDcRes.aux) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/In -troPart2.aux) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Do -mains.aux) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Mi -nimization.aux) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Co -stFunctions.aux) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Da -taSources.aux) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Re -gularization.aux) -(/usr/share/texlive/texmf-dist/tex/generic/kvdefinekeys/kvdefinekeys.sty) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Ma -pping.aux) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Fo -rwardModels.aux)) -(/usr/share/texlive/texmf-dist/tex/generic/pdfescape/pdfescape.sty -*geometry* driver: auto-detecting -*geometry* detected driver: pdftex -(/usr/share/texlive/texmf-dist/tex/context/base/mkii/supp-pdf.mkii -[Loading MPS to PDF converter (version 2006.09.02).] -)) (/usr/share/texlive/texmf-dist/tex/latex/epstopdf-pkg/epstopdf-base.sty -[57 -(/usr/share/texlive/texmf-dist/tex/latex/latexconfig/epstopdf-sys.cfg)] -(/usr/share/texlive/texmf-dist/tex/latex/hycolor/hycolor.sty)) [58pdfTeX warning (ext4): destination with the same identifier (name{figur + ###########################################FIRST TIME STEPS AND SOURCE]) +(/usr/share/texlive/texmf-dist/tex/latex/hyperref/hyperref.sty [34 ...shipout:D \box_use:N \l_shipout_box @@ -9660,8 +9619,7 @@ /build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/figu res/ex08pw650.png (PNG copy)> ] -(/usr/share/texlive/texmf-dist/tex/latex/hyperref/nameref.sty -(/usr/share/texlive/texmf-dist/tex/latex/refcount/refcount.styng docs for compound escript::AbstractReducer... +(/usr/share/texlive/texmf-dist/tex/generic/infwarerr/infwarerr.sty)ng docs for compound escript::AbstractReducer... Generating docs for compound escript::AbstractSystemMatrix... Generating docs for compound escript::AbstractTransportProblem... Generating docs for compound escript::FMax... @@ -9737,141 +9695,44 @@ Generating docs for compound paso::MUMPS_Handler... Generating docs for compound paso::MUMPS_Handler< double >... Generating docs for compound ) -(/usr/share/texlive/texmf-dist/tex/latex/letltxmacro/letltxmacro.sty) -(/usr/share/texlive/texmf-dist/tex/generic/gettitlestring/gettitlestring.sty)) -(/usr/share/texlive/texmf-dist/tex/latex/auxhook/auxhook.sty) -(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1phv.fd) -(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1pcr.fd) -(/usr/share/texlive/texmf-dist/tex/latex/kvoptions/kvoptions.sty [1{/var/lib/texmf/fo -nts/map/pdftex/updmap/pdftex.map}] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/do -cguide.tex [2]) [3)] [4] -(/usr/share/texlive/texmf-dist/tex/latex/hyperref/pd1enc.def -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/in -version.toc [5])) [6 +(/usr/share/texlive/texmf-dist/tex/generic/kvsetkeys/kvsetkeys.sty) Underfull \hbox (badness 10000) in paragraph at lines 218--223 LaTeX Warning: Reference `fig:tvsource' on page 59 undefined on input line 228. -[59] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/in -tro.tex -(/usr/share/texlive/texmf-dist/tex/generic/intcalc/intcalc.sty)pdfTeX warning (ext4): destination with the same identifier (name{figure.6.2 +[59pdfTeX warning (ext4): destination with the same identifier (name{figure.6.2 }) has been already used, duplicate ignored ...shipout:D \box_use:N \l_shipout_box l.273 t= t+h; n=n+1 &points=std::vector< double >(), const std::vector< int > &tags=std::vector< int >(), const TagMap &tagnamestonums=TagMap(), escript::SubWorld_ptr w=escript::SubWorld_ptr()) are not documented: - parameter 'points' - parameter 'tags' - parameter 'tagnamestonums' - parameter 'w' -)] (/usr/share/texlive/texmf-dist/tex/latex/listings/lstlang1.sty) -(/usr/share/texlive/texmf-dist/tex/generic/bitset/bitset.sty [12 &points=std::vector< double >(), const std::vector< int > &tags=std::vector< int >(), const TagMap &tagnamestonums=TagMap(), escript::SubWorld_ptr w=escript::SubWorld_ptr(), unsigned int subdivisions=1) are not documented: - parameter 'points' - parameter 'tags' - parameter 'tagnamestonums' - parameter 'w' - parameter 'subdivisions' -)/build/reproducible-path/python-escript-5.6/ripley/src/MultiRectangle.h:43: warning: The following parameters of ripley::MultiRectangle::MultiRectangle(dim_t n0, dim_t n1, double x0, double y0, double x1, double y1, int d0=-1, int d1=-1, const std::vector< double > &points=std::vector< double >(), const std::vector< int > &tags=std::vector< int >(), const TagMap &tagnamestonums=TagMap(), escript::SubWorld_ptr w=escript::SubWorld_ptr(), unsigned int subdivisions=1) are not documented: - parameter 'points' - parameter 'tags' - parameter 'tagnamestonums' - parameter 'w' - parameter 'subdivisions' - -(/usr/share/texlive/texmf-dist/tex/latex/base/atbegshi-ltx.sty>)]) -(/usr/share/texlive/texmf-dist/tex/latex/hyperref/hpdftex.def/build/reproducible-path/python-escript-5.6/ripley/src/Rectangle.h:48: warning: The following parameters of ripley::Rectangle::Rectangle(dim_t n0, dim_t n1, double x0, double y0, double x1, double y1, int d0=-1, int d1=-1, const std::vector< double > &points=std::vector< double >(), const std::vector< int > &tags=std::vector< int >(), const TagMap &tagnamestonums=TagMap(), escript::SubWorld_ptr w=escript::SubWorld_ptr()) are not documented: +ix/doc/cookbook/figures/source.png +(/usr/share/texlive/texmf-dist/tex/generic/kvdefinekeys/kvdefinekeys.sty) +(/usr/share/texlive/texmf-dist/tex/generic/pdfescape/pdfescape.sty)> +(/usr/share/texlive/texmf-dist/tex/latex/hycolor/hycolor.sty])) [35] [36] [37] [38] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/In +troPart2.tex +(/usr/share/texlive/texmf-dist/tex/latex/letltxmacro/letltxmacro.sty)>] +Chapter 5. +[39/build/reproducible-path/python-escript-5.6/ripley/src/Brick.h:48: warning: The following parameters of ripley::Brick::Brick(dim_t n0, dim_t n1, dim_t n2, double x0, double y0, double z0, double x1, double y1, double z1, int d0=-1, int d1=-1, int d2=-1, const std::vector< double > &points=std::vector< double >(), const std::vector< int > &tags=std::vector< int >(), const TagMap &tagnamestonums=TagMap(), escript::SubWorld_ptr w=escript::SubWorld_ptr()) are not documented: parameter 'points' parameter 'tags' parameter 'tagnamestonums' parameter 'w' - -(/usr/share/texlive/texmf-dist/tex/latex/base/atveryend-ltx.sty) +] +(/usr/share/texlive/texmf-dist/tex/latex/auxhook/auxhook.sty) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Dr +ivers.tex [40 +(/usr/share/texlive/texmf-dist/tex/latex/kvoptions/kvoptions.sty ]) Package natbib Warning: Citation `Cerjan1985' on page 60 undefined on input lin e 293. -[60 -(/usr/share/texlive/texmf-dist/tex/latex/rerunfilecheck/rerunfilecheck.sty]>] [13 ] -[14] [15 ] (/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1ptm.fd) [16] -(/usr/share/texlive/texmf-dist/tex/generic/uniquecounter/uniquecounter.sty [17)))] -[18] - -LaTeX Warning: Reference `fig:abconds' on page 61 undefined on input line 347. - -[61pdfTeX warning (ext4): destination with the same identifier (name{figure.6.3 -}) has been already used, duplicate ignored - ...shipout:D \box_use:N \l_shipout_box - -l.392 \clearpage - &points=std::vector< double >(), const std::vector< int > &tags=std::vector< int >(), const TagMap &tagnamestonums=TagMap(), escript::SubWorld_ptr w=escript::SubWorld_ptr()) are not documented: - parameter 'order' - parameter 'points' - parameter 'tags' - parameter 'tagnamestonums' - parameter 'w' - -(/usr/share/texlive/texmf-dist/tex/latex/oberdiek/hypcap.sty) -(/usr/share/texlive/texmf-dist/tex/latex/fancyhdr/fancyhdr.sty) -(/usr/share/texlive/texmf-dist/tex/latex/fncychap/fncychap.sty)) [19] [20 ] [21 ] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/user_de -fs.tex/build/reproducible-path/python-escript-5.6/speckley/src/Rectangle.h:44: warning: The following parameters of speckley::Rectangle::Rectangle(int order, dim_t n0, dim_t n1, double x0, double y0, double x1, double y1, int d0=-1, int d1=-1, const std::vector< double > &points=std::vector< double >(), const std::vector< int > &tags=std::vector< int >(), const TagMap &tagnamestonums=TagMap(), escript::SubWorld_ptr w=escript::SubWorld_ptr()) are not documented: - parameter 'order' - parameter 'points' - parameter 'tags' - parameter 'tagnamestonums' - parameter 'w' - -[22 ]In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, +[60 [41 +(/usr/share/texlive/texmf-dist/tex/latex/hyperref/pd1enc.def]]In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, @@ -9894,7 +9755,42 @@ /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ -) [62pdfTeX warning (ext4): destination with +) [42])/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' + 13 | BOOST_HEADER_DEPRECATED("") + | ^~~~~~~~~~~~~~~~~~~~~~~ + +(/usr/share/texlive/texmf-dist/tex/generic/intcalc/intcalc.sty)) [43] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Do +mains.tex [44] + +LaTeX Warning: Reference `fig:abconds' on page 61 undefined on input line 347. + +[61pdfTeX warning (ext4): destination with the same identifier (name{figure.6.3 +}) has been already used, duplicate ignored + ...shipout:D \box_use:N \l_shipout_box + +l.392 \clearpage + &points=std::vector< double >(), const std::vector< int > &tags=std::vector< int >(), const TagMap &tagnamestonums=TagMap(), escript::SubWorld_ptr w=escript::SubWorld_ptr(), unsigned int subdivisions=1) are not documented: + parameter 'points' + parameter 'tags' + parameter 'tagnamestonums' + parameter 'w' + parameter 'subdivisions' + ] +(/usr/share/texlive/texmf-dist/tex/generic/bitset/bitset.sty [47 &points=std::vector< double >(), const std::vector< int > &tags=std::vector< int >(), const TagMap &tagnamestonums=TagMap(), escript::SubWorld_ptr w=escript::SubWorld_ptr(), unsigned int subdivisions=1) are not documented: + parameter 'points' + parameter 'tags' + parameter 'tagnamestonums' + parameter 'w' + parameter 'subdivisions' +>] [62 +(/usr/share/texlive/texmf-dist/tex/generic/bigintcalc/bigintcalc.stypdfTeX warning (ext4): destination with the same identifier (name{figure.6.4}) has been already used, duplicate ignore d ...shipout:D \box_use:N \l_shipout_box @@ -9905,233 +9801,162 @@ n-escript-5.6/debian/tmp3/posix/doc/cookbook/figures/ex08sw320.png (PNG copy)> ]/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' - 13 | BOOST_HEADER_DEPRECATED("") - | ^~~~~~~~~~~~~~~~~~~~~~~ - -(/usr/share/texlive/texmf-dist/tex/latex/ccaption/ccaption.sty) -\@input{elist.aux} - -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/elist.t -ex (/usr/share/texlive/texmf-dist/tex/latex/listing/listing.sty -Package `listing', V1.2, <1999/05/25> -)))>] +ian/tmp3/posix/doc/cookbook/figures/ex08sw880.png (PNG copy)>])) +(/usr/share/texlive/texmf-dist/tex/latex/base/atbegshi-ltx.sty/build/reproducible-path/python-escript-5.6/ripley/src/Rectangle.h:48: warning: The following parameters of ripley::Rectangle::Rectangle(dim_t n0, dim_t n1, double x0, double y0, double x1, double y1, int d0=-1, int d1=-1, const std::vector< double > &points=std::vector< double >(), const std::vector< int > &tags=std::vector< int >(), const TagMap &tagnamestonums=TagMap(), escript::SubWorld_ptr w=escript::SubWorld_ptr()) are not documented: + parameter 'points' + parameter 'tags' + parameter 'tagnamestonums' + parameter 'w' +)) Underfull \hbox (badness 10000) in paragraph at lines 395--399 LaTeX Warning: Reference `fig:ex08cres' on page 63 undefined on input line 430. -) [63)pdfTeX warning (ext4): destination with the same identifier (name{figure.6 +) [63 +(/usr/share/texlive/texmf-dist/tex/latex/hyperref/hpdftex.defpdfTeX warning (ext4): destination with the same identifier (name{figure.6 .5}) has been already used, duplicate ignored ...shipout:D \box_use:N \l_shipout_box l.125 \chapter {3D Seismic Wave Propagation} ] [23 [64pdfTeX warning (ext4): destination with the same identifier (name{figure. +>] [64pdfTeX warning (ext4): destination with the same identifier (name{figure. 6.6}) has been already used, duplicate ignored ...shipout:D \box_use:N \l_shipout_box l.125 \chapter {3D Seismic Wave Propagation} ]] (/usr/share/texlive/texmf-dist/tex/latex/upquote/upquote.sty +cript-5.6/debian/tmp3/posix/doc/cookbook/figures/ex08c2601.png (PNG copy)>] Chapter 7. (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/exa mple09.tex -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Co -okMagnetic.tex [24] -(/usr/share/texlive/texmf-dist/tex/latex/base/textcomp.sty)) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/verinfo -.tex) -Chapter 2. - -Underfull \hbox (badness 10000) in paragraph at lines 7--7 -[]\OT1/ptm/m/n/10 Figure 2.1: Mag-netic anomaly data in $\OML/cmm/m/it/10 nT$ \ -OT1/ptm/m/n/10 from West-ern Queens-land, Aus-tralia (file -[25] [26 ]] -*geometry* driver: auto-detecting -*geometry* detected driver: pdftex -(/usr/share/texlive/texmf-dist/tex/context/base/mkii/supp-pdf.mkii -[Loading MPS to PDF converter (version 2006.09.02).] -) [67] (/usr/share/texlive/texmf-dist/tex/latex/epstopdf-pkg/epstopdf-base.sty [68 ]] +(/usr/share/texlive/texmf-dist/tex/generic/uniquecounter/uniquecounter.sty +Underfull \hbox (badness 10000) in paragraph at lines 261--261 +[][][]\OT1/ptm/m/n/8 In gen-eral any or-thog-o-nal co-or-di-nate trans-for-ma-t +ion can be sup-ported by build-ing sub-classes of the +[48]))) +(/usr/share/texlive/texmf-dist/tex/latex/oberdiek/hypcap.sty) +(/usr/share/texlive/texmf-dist/tex/latex/fancyhdr/fancyhdr.sty [49])) [66 [50]] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Mi +nimization.tex +(/usr/share/texlive/texmf-dist/tex/latex/fncychap/fncychap.sty)) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/user_de +fs.tex +Chapter 7. +[51] (/usr/share/texlive/texmf-dist/tex/latex/subfigure/subfigure.sty/build/reproducible-path/python-escript-5.6/speckley/src/Brick.h:46: warning: The following parameters of speckley::Brick::Brick(int order, dim_t n0, dim_t n1, dim_t n2, double x0, double y0, double z0, double x1, double y1, double z1, int d0=-1, int d1=-1, int d2=-1, const std::vector< double > &points=std::vector< double >(), const std::vector< int > &tags=std::vector< int >(), const TagMap &tagnamestonums=TagMap(), escript::SubWorld_ptr w=escript::SubWorld_ptr()) are not documented: + parameter 'order' + parameter 'points' + parameter 'tags' + parameter 'tagnamestonums' + parameter 'w' + [67 [52]] [68 +**************************************** +* Local config file subfigure.cfg used * +**************************************** +(/usr/share/texlive/texmf-dist/tex/latex/subfigure/subfigure.cfg) ] -(/usr/share/texlive/texmf-dist/tex/latex/latexconfig/epstopdf-sys.cfg))) [27] [28 ] [29 ] -(/usr/share/texlive/texmf-dist/tex/latex/hyperref/nameref.sty -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Co -okJointDUMMY.tex [30] -Chapter 3. -) [31] [69pdfTeX warning ( +x/doc/cookbook/figures/gmsh-example09msh3d.png (PNG copy))>] (/usr/share/texlive/texmf-dist/tex/latex/psnfss/omsptm.fd) +(/usr/share/texlive/texmf-dist/tex/latex/graphics/color.sty +(/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/color.cfg [53]))) [69pdfTeX warning ( ext4): destination with the same identifier (name{figure.7.1}) has been already used, duplicate ignored ...shipout:D \box_use:N \l_shipout_box l.186 \clearpage ] +/doc/cookbook/figures/gmsh-example09lc.png +[54 (PNG copy)>]] +(/usr/share/texlive/texmf-dist/tex/latex/ccaption/ccaption.sty) (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Co -okDcRes.texpaso::MUMPS_Handler< cplx_t >... -Generating docs for compound paso::Options... -Generating docs for compound paso::PasoException... -Generating docs for compound paso::Pattern... -Generating docs for compound paso::DegreeAndIdx... -Generating docs for compound paso::Performance... -Generating docs for compound paso::Preconditioner... -Generating docs for compound paso::Preconditioner_LocalSmoother... -Generating docs for compound paso::Preconditioner_Smoother... -Generating docs for compound paso::Solver_ILU... -Generating docs for compound paso::Solver_RILU... -Generating docs for compound paso::ReactiveSolver... -Generating docs for compound paso::SharedComponents... -Generating docs for compound paso::SparseMatrix... -Generating docs for compound paso::SystemMatrix... -Generating docs for compound paso::SystemMatrixPattern... -Generating docs for compound paso::TransportProblem... -Generating docs for compound paso::UMFPACK_Handler... -Generating docs for namespace paso::util -Generating docs for namespace ripley -Generating docs for compound ripley::AbstractAssembler... -Generating docs for compound ripley::Brick... -Generating docs for compound ripley::DefaultAssembler2D... -Generating docs for compound ripley::DefaultAssembler3D... -Generating docs for compound ripley::LameAssembler2D... -Generating docs for compound ripley::LameAssembler3D... -Generating docs for compound ripley::MultiBrick... -Generating docs for compound ripley::MultiRectangle... -Generating docs for compound ripley::Rectangle... -Generating docs for compound ripley::ReaderParameters... -Generating docs for compound ripley::DiracPoint... -Generating docs for compound ripley::RipleyDomain... -Generating docs for compound ripley::RipleyException... -Generating docs for compound ripley::SystemMatrix... -Generating docs for compound ripley::WaveAssembler2D... -Generating docs for compound ripley::WaveAssembler3D... -Generating docs for namespace speckley -Generating docs for compound speckley::AbstractAssembler... -Generating docs for compound speckley::Brick... -Generating docs for compound speckley::RipleyCoupler... -Generating docs for nested compound speckley::RipleyCoupler::Ripley... -Generating docs for compound speckley::DefaultAssembler2D... -Generating docs for compound speckley::DefaultAssembler3D... -Generating docs for compound speckley::Rectangle... -Generating docs for compound speckley::ReaderParameters... -Generating docs for compound speckley::DiracPoint... -Generating docs for compound speckley::SpeckleyDomain... -Generating docs for compound speckley::SpeckleyException... -Generating docs for compound speckley::WaveAssembler2D... -Generating docs for compound speckley::WaveAssembler3D... -Generating docs for namespace weipa -Generating docs for compound weipa::DataVar... -Generating docs for compound weipa::DomainChunk... -Generating docs for compound weipa::QuadMaskInfo... -Generating docs for compound weipa::ElementData... -Generating docs for compound weipa::VarInfo... -Generating docs for compound weipa::EscriptDataset... -Generating docs for compound weipa::FinleyDomain... -Generating docs for compound weipa::FinleyElementInfo... -Generating docs for compound weipa::FinleyElements... -Generating docs for compound weipa::FinleyNodes... -Generating docs for compound weipa::NodeData... -Generating docs for compound weipa::RipleyDomain... -Generating docs for compound weipa::RipleyElements... -Generating docs for compound weipa::RipleyNodes... -Generating docs for compound weipa::SpeckleyDomain... -Generating docs for compound weipa::SpeckleyElements... -Generating docs for compound weipa::SpeckleyNodes... -Generating docs for compound weipa::VisItData... -Generating docs for compound weipa::WeipaException... -Generating docs for namespace weipa::VisItControl -Generating graph info page... -Generating directory documentation... -Generating index page... -Generating page index... -Generating module index... -Generating namespace index... -Generating namespace member index... -Generating annotated compound index... -Generating alphabetical compound index... -Generating hierarchical class index... -Generating m [32] -(/usr/share/texlive/texmf-dist/tex/latex/refcount/refcount.sty) -Chapter 4. -[33] -(/usr/share/texlive/texmf-dist/tex/generic/gettitlestring/gettitlestring.sty) [34 + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' + 36 | BOOST_PRAGMA_MESSAGE( + | ^~~~~~~~~~~~~~~~~~~~ + +Package `listing', V1.2, <1999/05/25> +))) [56] (/usr/share/texlive/texmf-dist/tex/latex/upquote/upquote.sty Underfull \hbox (badness 10000) in paragraph at lines 202--209 Overfull \hbox (25.36078pt too wide) in paragraph at lines 222--223 [][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][ ][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][] -) -(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1phv.fd) [70] [71 + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' + 36 | BOOST_PRAGMA_MESSAGE( + | ^~~~~~~~~~~~~~~~~~~~ +] [70] [58 [71/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' + 13 | BOOST_HEADER_DEPRECATED("") + | ^~~~~~~~~~~~~~~~~~~~~~~ + ] [72] +/ex09b00440.png (PNG copy)>]) [72]] Chapter 8. (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/exa -mple10.tex [1{/var/lib/texmf/fo -nts/map/pdftex/updmap/pdftex.map}] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/copyrig -hts.tex (/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1pcr.fd) +mple10.tex) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/verinfo +.tex/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' + 13 | BOOST_HEADER_DEPRECATED("") + | ^~~~~~~~~~~~~~~~~~~~~~~ + [59)] Package natbib Warning: Citation `Blakely1995' on page 73 undefined on input li ne 27. @@ -10145,27 +9970,42 @@ LaTeX Warning: Reference `eqn:poisson' on page 73 undefined on input line 46. -[73] -(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsa.fd) -(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsb.fd) [74]) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/docguid -e.tex [2]) [3] (/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1ptm.fd) -[4] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/current -dev.tex [5]) [6]ember index... -Generating file index... -Generating file member index... -Generating example index... -finalizing index lists... -writing tag file... -Running plantuml with JAVA... -lookup cache used 19453/65536 hits=310549 misses=20580 -finished... - -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/user.to -c>]) [35] [36] [7] [37] [38] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/In -troPart2.tex [8] +[73)] [60] [74] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Da +taSources.tex +Writing index file user.idx +(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1ptm.fd/build/reproducible-path/python-escript-5.6/speckley/src/Rectangle.h:44: warning: The following parameters of speckley::Rectangle::Rectangle(int order, dim_t n0, dim_t n1, double x0, double y0, double x1, double y1, int d0=-1, int d1=-1, const std::vector< double > &points=std::vector< double >(), const std::vector< int > &tags=std::vector< int >(), const TagMap &tagnamestonums=TagMap(), escript::SubWorld_ptr w=escript::SubWorld_ptr()) are not documented: + parameter 'order' + parameter 'points' + parameter 'tags' + parameter 'tagnamestonums' + parameter 'w' +) +Chapter 9. +[61In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, + from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, + from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, + from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, + from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, + from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, + from /usr/include/boost/shared_ptr.hpp:17, + from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12, + from /usr/include/boost/python/converter/arg_to_python.hpp:15, + from /usr/include/boost/python/call.hpp:15, + from /usr/include/boost/python/object_core.hpp:14, + from /usr/include/boost/python/extract.hpp:16, + from debian/stage3/include/escript/WrappedArray.h:25, + from debian/stage3/include/escript/DataVectorAlt.h:26, + from debian/stage3/include/escript/DataVector.h:24, + from debian/stage3/include/escript/DataAbstract.h:23, + from debian/stage3/include/escript/Data.h:24, + from debian/stage3/include/dudley/Dudley.h:31, + from dudley/src/dudleycpp.cpp:18: +/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' + 36 | BOOST_PRAGMA_MESSAGE( + | ^~~~~~~~~~~~~~~~~~~~ + ] Underfull \hbox (badness 10000) in paragraph at lines 93--97 @@ -10183,7 +10023,8 @@ LaTeX Warning: Reference `fig:ex10pot' on page 75 undefined on input line 147. -[75] [76 [9pdfTeX warning (ext4): destination with the same identifier (name{figur +[75 +(/usr/share/texlive/texmf-dist/tex/latex/l3backend/l3backend-pdftex.def]) [76pdfTeX warning (ext4): destination with the same identifier (name{figur e.8.1}) has been already used, duplicate ignored ...shipout:D \box_use:N \l_shipout_box @@ -10194,36 +10035,11 @@ l.177 \clearpage ] [41] [11 ] [42])) [43] - -LaTeX Warning: Citation `Zienc' on page 12 undefined on input line 148. - - -LaTeX Warning: Citation `NumHand' on page 12 undefined on input line 148. - -[12] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Do -mains.tex [44] (/usr/share/texlive/texmf-dist/tex/latex/listings/lstlang1.sty) -Chapter 6. -[45] [46 ] ] [47 + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ -/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' +]) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/execute +.aux) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/escript +.aux) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/linearP +DE.aux/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ ->] -Underfull \hbox (badness 10000) in paragraph at lines 261--261 -[][][]\OT1/ptm/m/n/8 In gen-eral any or-thog-o-nal co-or-di-nate trans-for-ma-t -ion can be sup-ported by build-ing sub-classes of the -[48] - -LaTeX Warning: Citation `matplotlib' on page 15 undefined on input line 312. - - -LaTeX Warning: Citation `mayavi' on page 15 undefined on input line 317. - - -LaTeX Warning: Citation `VisIt' on page 15 undefined on input line 317. - -[15> ]g++ -o debian/tmp3/posix/dudley/src/Assemble_CopyNodalData.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/Assemble_CopyNodalData.cpp - (/usr/share/texlive/texmf-dist/tex/latex/psnfss/omsptm.fd) [53]) -[54] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Co -stFunctions.tex -Chapter 8. -[55] - -LaTeX Warning: Citation `matplotlib' on page 17 undefined on input line 408. - - -LaTeX Warning: Citation `mayavi' on page 17 undefined on input line 426. - - -LaTeX Warning: Citation `VisIt' on page 17 undefined on input line 426. - -[17 ] [56]g++ -o debian/tmp3/posix/dudley/src/Assemble_PDE_System_2D.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/Assemble_PDE_System_2D.cpp ) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/diffusi -on.tex [57] [58] [18 ] [59]) [60] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Da -taSources.tex [19] -Chapter 9. -[61 ] [62>]] [77pdfTeX w +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/pycad.a +ux)/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' + 13 | BOOST_HEADER_DEPRECATED("") + | ^~~~~~~~~~~~~~~~~~~~~~~ + [63 +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/Models. +aux]) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/finley. +aux) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/ripley. +aux [64) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/speckle +y.aux) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/weipa.a +ux) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/trilino +s.aux)] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/symboli +c.aux) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/subworl +ds.aux) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/appendi +x.aux)) [65]) [66] +*geometry* driver: auto-detecting +*geometry* detected driver: pdftex +(/usr/share/texlive/texmf-dist/tex/context/base/mkii/supp-pdf.mkii +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Re +gularization.tex +[Loading MPS to PDF converter (version 2006.09.02).] +)> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' + 36 | BOOST_PRAGMA_MESSAGE( + | ^~~~~~~~~~~~~~~~~~~~ + [73]>] [77pdfTeX w arning (ext4): destination with the same identifier (name{figure.8.3}) has been already used, duplicate ignored ...shipout:D \box_use:N \l_shipout_box @@ -10307,24 +10154,71 @@ l.177 \clearpage ] [66 [24 ]] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Re -gularization.tex [25 ] -Chapter 10. -[67] [26] [68]> ]) [69] [27] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Ma -pping.tex [70] +/doc/cookbook/figures/mayavi2_cell2point.png [1{/var/lib/texmf/fo +nts/map/pdftex/updmap/pdftex.map}] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/copyrig +hts.tex (/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1pcr.fd [74]/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' + 13 | BOOST_HEADER_DEPRECATED("") + | ^~~~~~~~~~~~~~~~~~~~~~~ +In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, + from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, + from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, + from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, + from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, + from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, + from /usr/include/boost/shared_ptr.hpp:17, + from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12, + from /usr/include/boost/python/converter/arg_to_python.hpp:15, + from /usr/include/boost/python/call.hpp:15, + from /usr/include/boost/python/object_core.hpp:14, + from /usr/include/boost/python/extract.hpp:16, + from debian/stage3/include/escript/WrappedArray.h:25, + from debian/stage3/include/escript/DataVectorAlt.h:26, + from debian/stage3/include/escript/DataVector.h:24, + from debian/stage3/include/escript/DataAbstract.h:23, + from debian/stage3/include/escript/Data.h:24, + from dudley/src/Dudley.h:31, + from dudley/src/Assemble.h:27, + from dudley/src/Assemble_getNormal.cpp:18: +/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' + 36 | BOOST_PRAGMA_MESSAGE( + | ^~~~~~~~~~~~~~~~~~~~ +) +(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsa.fd) +(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsb.fd))) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Fo +rwardMagnetic.tex +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/docguid +e.tex [2])/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' + 13 | BOOST_HEADER_DEPRECATED("") + | ^~~~~~~~~~~~~~~~~~~~~~~ + [75 [3] (/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1ptm.fd) +[4]] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/current +dev.tex [5]) [6] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/user.to +c [76] [7] [8 [77])] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Fo +rwardMagneticIntensity.tex [9]) [78 [10]] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/Tutoria +lPDE.tex [79 +Chapter 1. + +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/firstst +ep.tex]) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Fo +rwardSelfMagnetic.tex [80] [81 [11 ]]> ] + +LaTeX Warning: Citation `Zienc' on page 12 undefined on input line 148. + + +LaTeX Warning: Citation `NumHand' on page 12 undefined on input line 148. + +[12) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Fo +rward2DMTTEMode.tex] [82] [83 (/usr/share/texlive/texmf-dist/tex/latex/listings/lstlang1.sty] Underfull \hbox (badness 10000) in paragraph at lines 180--184 @@ -10338,7 +10232,9 @@ LaTeX Warning: Reference `fig:ex10p' on page 78 undefined on input line 218. -[78] [79pdfTeX warning (ext4): destination with the same identifier (name{figur +[78)] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Fo +rwardDCRES.tex [79)pdfTeX warning (ext4): destination with the same identifier (name{figur e.8.5}) has been already used, duplicate ignored ...shipout:D \box_use:N \l_shipout_box @@ -10351,50 +10247,150 @@ ] -[80pdfTeX warning (ext4): destination with the same identifier (name{figure.8.7 +[80 [84pdfTeX warning (ext4): destination with the same identifier (name{figure.8.7 }) has been already used, duplicate ignored ...shipout:D \box_use:N \l_shipout_box l.246 \clearpage ]) -Chapter 11. -[71] - -LaTeX Warning: Citation `GNUPLOT' on page 28 undefined on input line 359. - -[28 ]) - -LaTeX Warning: Citation `SCIPY' on page 29 undefined on input line 396. - - -LaTeX Warning: Citation `SCIPY' on page 29 undefined on input line 398. - -) [72] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/heatedb -lock.tex [29 ] +/doc/cookbook/figures/ex10p_boundeff.pdf>]] [85] [86])) [87] [88] [13 +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/in +version.ind [89 ] [91]) [92] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/in +version.aux +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/in +tro.aux) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Co +okGravity.aux) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Co +okMagnetic.aux) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Co +okJointDUMMY.aux) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Co +okDcRes.aux) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/In +troPart2.aux) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Do +mains.aux) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Mi +nimization.aux) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Co +stFunctions.aux) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Da +taSources.aux) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Re +gularization.aux) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Ma +pping.aux) (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Fo -rwardModels.tex -Chapter 12. +rwardModels.aux)) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Fo -rwardGravity.tex [31]) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/stokesf -low.tex [32 [73]] +Package rerunfilecheck Warning: File `inversion.out' has changed. +(rerunfilecheck) Rerun to get outlines right +(rerunfilecheck) or use package `bookmark'. + + ) +(see the transcript file for additional information){/usr/share/texlive/texmf-d +ist/fonts/enc/dvips/base/8r.enc}... +Generating docs for compound paso::Options... +Generating docs for compound paso::PasoException... +Generating docs for compound paso::Pattern... +Generating docs for compound paso::DegreeAndIdx... +Generating docs for compound paso::Performance... +Generating docs for compound paso::Preconditioner... +Generating docs for compound paso::Preconditioner_LocalSmoother... +Generating docs for compound paso::Preconditioner_Smoother... +Generating docs for compound paso::Solver_ILU... +Generating docs for compound paso::Solver_RILU... +Generating docs for compound paso::ReactiveSolver... +Generating docs for compound paso::SharedComponents... +Generating docs for compound paso::SparseMatrix... +Generating docs for compound paso::SystemMatrix... +Generating docs for compound paso::SystemMatrixPattern... +Generating docs for compound paso::TransportProblem... +Generating docs for compound paso::UMFPACK_Handler... +Generating docs for namespace paso::util +Generating docs for namespace ripley +Generating docs for compound ripley::AbstractAssembler... +Generating docs for compound ripley::Brick... +Generating docs for compound ripley::DefaultAssembler2D... +Generating docs for compound ripley::DefaultAssembler3D... +Generating docs for compound ripley::LameAssembler2D... +Generating docs for compound ripley::LameAssembler3D... +Generating docs for compound ripley::MultiBrick... +Generating docs for compound ripley::MultiRectangle... +Generating docs for compound ripley::Rectangle... +Generating docs for compound ripley::ReaderParameters... +Generating docs for compound ripley::DiracPoint... +Generating docs for compound ripley::RipleyDomain... +Generating docs for compound ripley::RipleyException... +Generating docs for compound ripley::SystemMatrix... +Generating docs for compound ripley::WaveAssembler2D... +Generating docs for compound ripley::WaveAssembler3D... +Generating docs for namespace speckley +Generating docs for compound speckley::AbstractAssembler... +Generating docs for compound speckley::Brick... +Generating docs for compound speckley::RipleyCoupler... +Generating docs for nested compound speckley::RipleyCoupler::Ripley... +Generating docs for compound speckley::DefaultAssembler2D... +Generating docs for compound speckley::DefaultAssembler3D... +Generating docs for compound speckley::Rectangle... +Generating docs for compound speckley::ReaderParameters... +Generating docs for compound speckley::DiracPoint... +Generating docs for compound speckley::SpeckleyDomain... +Generating docs for compound speckley::SpeckleyException... +Generating docs for compound speckley::WaveAssembler2D... +Generating docs for compound speckley::WaveAssembler3D... +Generating docs for namespace weipa +Generating docs for compound weipa::DataVar... +Generating docs for compound weipa::DomainChunk... +Generating docs for compound weipa::QuadMaskInfo... +Generating docs for compound weipa::ElementData... +Generating docs for compound weipa::VarInfo... +Generating docs for compound weipa::EscriptDataset... +Generating docs for compound weipa::FinleyDomain... +Generating docs for compound weipa::FinleyElementInfo... +Generating docs for compound weipa::FinleyElements... +Generating docs for compound weipa::FinleyNodes... +Generating docs for compound weipa::NodeData... +Generating docs for compound weipa::RipleyDomain... +Generating docs for compound weipa::RipleyElements... +Generating docs for compound weipa::RipleyNodes... +Generating docs for compound weipa::SpeckleyDomain... +Generating docs for compound weipa::SpeckleyElements... +Generating docs for compound weipa::SpeckleyNodes... +Generating docs for compound weipa::VisItData... +Generating docs for compound weipa::WeipaException... +Generating docs for namespace weipa::VisItControl +Generating graph info page... +Generating directory documentation... +Generating index page... +Generating page index... +Generating module index... +Generating namespace index... +Generating namespace member index... +Generating annotated compound index... +Generating alphabetical compound index... +Generating hierarchical class index... +Generating m>pdfTeX warning (ext4): destination with the same identifier (name{figur e.8.8}) has been already used, duplicate ignored ...shipout:D \box_use:N \l_shipout_box @@ -10415,12 +10413,16 @@ l.406 \clearpage ] - - -LaTeX Warning: Citation `LBB' on page 33 undefined on input line 106. - -[33 +n-escript-5.6/debian/tmp3/posix/doc/cookbook/figures/ex10m_msh.png (PNG copy)] +> LaTeX Warning: Reference `fig:ex10q boundeff' on page 84 undefined on input lin e 427. @@ -10432,24 +10434,32 @@ LaTeX Warning: Reference `fig:ex10q boundeff' on page 84 undefined on input lin e 443. -[84]pdfTeX warning (ext4): destination with the same identifier (name{figure.8.1 +[84 +pdfTeX warning (ext4): destination with the same identifier (name{figure.8.1 0}) has been already used, duplicate ignored ...shipout:D \box_use:N \l_shipout_box l.449 \clearpage ] [85pdfTeX warning (ext4): destinatio +/doc/cookbook/figures/ex10q_boundeff.pdf>] [85 ...shipout:D \box_use:N \l_shipout_box l.449 \clearpage ]) [86] [74 +/doc/cookbook/figures/ex10q_boundeff_zoom.pdf]>> [86] Chapter 9. (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/exa -mple11.tex] +mple11.tex +Output written on inversion.pdf (92 pages, 5275662 bytes). +Transcript written on inversion.log. + Package natbib Warning: Citation `Loke2004' on page 87 undefined on input line 24. @@ -10468,7 +10478,7 @@ Package natbib Warning: Citation `Honig2007' on page 87 undefined on input line 73. -)) +) No file cookbook.bbl. Package natbib Warning: There were undefined citations. @@ -10604,250 +10614,240 @@ {/usr/share/texlive/texmf-dist/fonts/enc/dvips/base/8r.enc} -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Fo -rwardMagnetic.texInstall file: "debian/tmp3/posix/doc/inversion/inversion.pdf" as "debian/stage3/release/doc/inversion/inversion.pdf" +] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/slip.te -x [35> > ]] -Output written on cookbook.pdf (88 pages, 4380527 bytes). +hare/texlive/texmf-dist/fonts/type1/urw/helvetic/uhvr8a.pfb> +Output written on cookbook.pdf (88 pages, 4380667 bytes). Transcript written on cookbook.log. - -[36 ]cd debian/tmp3/posix/doc/cookbook && bibtex cookbook - [77]) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Fo -rwardMagneticIntensity.tex [78] [37] [79]) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Fo -rwardSelfMagnetic.tex) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/dirac.t -ex [80] [81] [38 ]cd debian/tmp3/posix/doc/cookbook && bibtex cookbook +This is BibTeX, Version 0.99d (TeX Live 2020/Debian) The top-level auxiliary file: cookbook.aux The style file: plainnat.bst Database file #1: cookbook.bib +cd debian/tmp3/posix/doc/cookbook && makeindex cookbook.idx -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Fo -rwardDCRES.tex [84]cd debian/tmp3/posix/doc/cookbook && makeindex cookbook.idx - [85] [86])) [87] [88] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/in -version.ind [89]) [90] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/in -version.bbl [91]) [92] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/in -version.aux -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/in -tro.aux) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Co -okGravity.aux) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Co -okMagnetic.aux) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Co -okJointDUMMY.aux) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Co -okDcRes.aux) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/In -troPart2.aux) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Do -mains.aux)This is makeindex, version 2.15 [TeX Live 2020] (kpathsea + Thai support). + +LaTeX Warning: Citation `matplotlib' on page 17 undefined on input line 408. + + +LaTeX Warning: Citation `mayavi' on page 17 undefined on input line 426. + + +LaTeX Warning: Citation `VisIt' on page 17 undefined on input line 426. + +[17 ]) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/diffusi +on.texThis is makeindex, version 2.15 [TeX Live 2020] (kpathsea + Thai support). Scanning input file cookbook.idx....done (2 entries accepted, 0 rejected). Sorting entries....done (2 comparisons). Generating output file cookbook.ind....done (9 lines written, 0 warnings). Output written in cookbook.ind. Transcript written in cookbook.ilg. - -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Mi -nimization.aux) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Co -stFunctions.aux) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Da -taSources.aux) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Re -gularization.aux) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Ma -pping.aux) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Fo -rwardModels.aux)) - -Package rerunfilecheck Warning: File `inversion.out' has changed. -(rerunfilecheck) Rerun to get outlines right -(rerunfilecheck) or use package `bookmark'. - - ) -(see the transcript file for additional information){/usr/share/texlive/texmf-d -ist/fonts/enc/dvips/base/8r.enc} - -Output written on inversion.pdf (92 pages, 5275289 bytes). -Transcript written on inversion.log. -This is pdfTeX, Version 3.14159265-2.6-1.40.21 (TeX Live 2020/Debian) (preloaded format=pdflatex) +cd debian/tmp3/posix/doc/cookbook && pdflatex -interaction=nonstopmode -recorder -interaction=nonstopmode \\newcommand{\\RepVersion}{-2\\xspace}\\input{cookbook.tex} cookbook.tex + [18ember index... +Generating file index... +Generating file member index... +Generating example index... +finalizing index lists... +writing tag file... +Running plantuml with JAVA... +lookup cache used 19453/65536 hits=310549 misses=20580 +finished... + ] [19]This is pdfTeX, Version 3.14159265-2.6-1.40.21 (TeX Live 2020/Debian) (preloaded format=pdflatex) restricted \write18 enabled. + [20]In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, + from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, + from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, + from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, + from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, + from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, + from /usr/include/boost/shared_ptr.hpp:17, + from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12, + from /usr/include/boost/python/converter/arg_to_python.hpp:15, + from /usr/include/boost/python/call.hpp:15, + from /usr/include/boost/python/object_core.hpp:14, + from /usr/include/boost/python/extract.hpp:16, + from debian/stage3/include/escript/WrappedArray.h:25, + from debian/stage3/include/escript/DataVectorAlt.h:26, + from debian/stage3/include/escript/DataVector.h:24, + from debian/stage3/include/escript/DataAbstract.h:23, + from debian/stage3/include/escript/Data.h:24, + from dudley/src/Dudley.h:31, + from dudley/src/Assemble.h:27, + from dudley/src/Assemble_getSize.cpp:18: +/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' + 36 | BOOST_PRAGMA_MESSAGE( + | ^~~~~~~~~~~~~~~~~~~~ entering extended mode LaTeX2e <2020-10-01> patch level 4 L3 programming layer <2021-01-09> xparse <2020-03-03> (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/coo -kbook.texg++ -o debian/tmp3/posix/dudley/src/Assemble_getSize.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/Assemble_getSize.cpp +kbook.texg++ -o debian/tmp3/posix/dudley/src/Assemble_integrate.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/Assemble_integrate.cpp +/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' + 13 | BOOST_HEADER_DEPRECATED("") + | ^~~~~~~~~~~~~~~~~~~~~~~ (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/esy sdoc.cls Document Class: esysdoc (/usr/share/texlive/texmf-dist/tex/latex/base/book.cls Document Class: book 2020/04/10 v1.4m Standard LaTeX document class -(/usr/share/texlive/texmf-dist/tex/latex/base/bk10.clo)) +(/usr/share/texlive/texmf-dist/tex/latex/base/bk10.clo) [21)] (/usr/share/texlive/texmf-dist/tex/latex/geometry/geometry.sty -(/usr/share/texlive/texmf-dist/tex/latex/graphics/keyval.sty)Install file: "debian/tmp3/posix/doc/inversion/inversion.pdf" as "debian/stage3/release/doc/inversion/inversion.pdf" - +(/usr/share/texlive/texmf-dist/tex/latex/graphics/keyval.sty) (/usr/share/texlive/texmf-dist/tex/generic/iftex/ifvtex.sty (/usr/share/texlive/texmf-dist/tex/generic/iftex/iftex.sty)) Package geometry Warning: Over-specification in `h'-direction. `width' (478.00812pt) is ignored. -) (/usr/share/texlive/texmf-dist/tex/latex/psnfss/times.sty) +) [22 (/usr/share/texlive/texmf-dist/tex/latex/psnfss/times.sty]) (/usr/share/texlive/texmf-dist/tex/latex/listings/listings.sty (/usr/share/texlive/texmf-dist/tex/latex/listings/lstmisc.sty) -(/usr/share/texlive/texmf-dist/tex/latex/listings/listings.cfg)) +(/usr/share/texlive/texmf-dist/tex/latex/listings/listings.cfg))) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/wave.te +x (/usr/share/texlive/texmf-dist/tex/generic/iftex/ifpdf.sty) -(/usr/share/texlive/texmf-dist/tex/latex/base/makeidx.sty) +(/usr/share/texlive/texmf-dist/tex/latex/base/makeidx.sty) [23 (/usr/share/texlive/texmf-dist/tex/latex/url/url.sty) -(/usr/share/texlive/texmf-dist/tex/latex/tools/xspace.sty) -(/usr/share/texlive/texmf-dist/tex/latex/graphics/graphicx.sty +(/usr/share/texlive/texmf-dist/tex/latex/tools/xspace.sty ] [24) +(/usr/share/texlive/texmf-dist/tex/latex/graphics/graphicx.sty] (/usr/share/texlive/texmf-dist/tex/latex/graphics/graphics.sty -(/usr/share/texlive/texmf-dist/tex/latex/graphics/trig.sty) -(/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/graphics.cfg) +(/usr/share/texlive/texmf-dist/tex/latex/graphics/trig.sty [25) +(/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/graphics.cfg) ] (/usr/share/texlive/texmf-dist/tex/latex/graphics-def/pdftex.def))) -(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsmath.styg++ -o debian/tmp3/posix/dudley/src/Assemble_AverageElementData.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/Assemble_AverageElementData.cpp - +(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsmath.sty For additional information on amsmath, use the `?' option. (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amstext.sty (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsgen.sty)) -(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsbsy.sty) +(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsbsy.sty) [26] (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsopn.sty)) (/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amsfonts.sty) (/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amssymb.sty) (/usr/share/texlive/texmf-dist/tex/latex/underscore/underscore.sty) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/hyperref.sty -(/usr/share/texlive/texmf-dist/tex/generic/ltxcmds/ltxcmds.sty) +(/usr/share/texlive/texmf-dist/tex/generic/ltxcmds/ltxcmds.sty) [27] (/usr/share/texlive/texmf-dist/tex/generic/pdftexcmds/pdftexcmds.sty (/usr/share/texlive/texmf-dist/tex/generic/infwarerr/infwarerr.sty)) -(/usr/share/texlive/texmf-dist/tex/generic/kvsetkeys/kvsetkeys.sty)>] +(/usr/share/texlive/texmf-dist/tex/generic/kvsetkeys/kvsetkeys.sty + +LaTeX Warning: Citation `GNUPLOT' on page 28 undefined on input line 346. + +(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1pcr.fd)) (/usr/share/texlive/texmf-dist/tex/generic/kvdefinekeys/kvdefinekeys.sty) -(/usr/share/texlive/texmf-dist/tex/generic/pdfescape/pdfescape.sty))) [39 +(/usr/share/texlive/texmf-dist/tex/generic/pdfescape/pdfescape.sty ]) +(/usr/share/texlive/texmf-dist/tex/latex/hycolor/hycolor.sty + +LaTeX Warning: Citation `SCIPY' on page 29 undefined on input line 396. + + +LaTeX Warning: Citation `SCIPY' on page 29 undefined on input line 398. + +)) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/heatedb +lock.tex +(/usr/share/texlive/texmf-dist/tex/latex/letltxmacro/letltxmacro.sty [29 )] +(/usr/share/texlive/texmf-dist/tex/latex/auxhook/auxhook.sty) [30] (/usr/share/texlive/texmf-dist/tex/latex/kvoptions/kvoptions.sty) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/pd1enc.def) (/usr/share/texlive/texmf-dist/tex/generic/intcalc/intcalc.sty) -(/usr/share/texlive/texmf-dist/tex/generic/etexcmds/etexcmds.sty) -(/usr/share/texlive/texmf-dist/tex/generic/bitset/bitset.sty +(/usr/share/texlive/texmf-dist/tex/generic/etexcmds/etexcmds.sty) [31]) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/stokesf +low.tex [32 +(/usr/share/texlive/texmf-dist/tex/generic/bitset/bitset.sty ] (/usr/share/texlive/texmf-dist/tex/generic/bigintcalc/bigintcalc.sty)) + +LaTeX Warning: Citation `LBB' on page 33 undefined on input line 106. + +[33] (/usr/share/texlive/texmf-dist/tex/latex/base/atbegshi-ltx.sty)) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/hpdftex.def (/usr/share/texlive/texmf-dist/tex/latex/base/atveryend-ltx.sty) (/usr/share/texlive/texmf-dist/tex/latex/rerunfilecheck/rerunfilecheck.sty (/usr/share/texlive/texmf-dist/tex/generic/uniquecounter/uniquecounter.sty))) -(/usr/share/texlive/texmf-dist/tex/latex/oberdiek/hypcap.sty) -(/usr/share/texlive/texmf-dist/tex/latex/fancyhdr/fancyhdr.sty) -(/usr/share/texlive/texmf-dist/tex/latex/fncychap/fncychap.sty>])) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/execute -.tex +(/usr/share/texlive/texmf-dist/tex/latex/oberdiek/hypcap.sty)) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/slip.te +x +(/usr/share/texlive/texmf-dist/tex/latex/fancyhdr/fancyhdr.sty) [34 +(/usr/share/texlive/texmf-dist/tex/latex/fncychap/fncychap.sty)]) (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/coo -kbook_defs.tex [40] (/usr/share/texlive/texmf-dist/tex/latex/subfigure/subfigure.sty +kbook_defs.tex [35 (/usr/share/texlive/texmf-dist/tex/latex/subfigure/subfigure.sty **************************************** * Local config file subfigure.cfg used * **************************************** -(/usr/share/texlive/texmf-dist/tex/latex/subfigure/subfigure.cfg)) +(/usr/share/texlive/texmf-dist/tex/latex/subfigure/subfigure.cfg ])) (/usr/share/texlive/texmf-dist/tex/latex/graphics/epsfig.sty) -Chapter 2. - -LaTeX Warning: Citation `OPENMP' on page 41 undefined on input line 46. - - -LaTeX Warning: Citation `MPI' on page 41 undefined on input line 47. - -[41] (/usr/share/texlive/texmf-dist/tex/latex/graphics/color.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/color.cfg)) -(/usr/share/texlive/texmf-dist/tex/latex/base/alltt.sty) [42] -(/usr/share/texlive/texmf-dist/tex/latex/base/textcomp.sty) -(/usr/share/texlive/texmf-dist/tex/latex/setspace/setspace.sty)) [43] [44] +[36 +(/usr/share/texlive/texmf-dist/tex/latex/base/alltt.sty) +(/usr/share/texlive/texmf-dist/tex/latex/base/textcomp.sty]) +(/usr/share/texlive/texmf-dist/tex/latex/setspace/setspace.sty) (/usr/share/texlive/texmf-dist/tex/latex/xcolor/xcolor.sty -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/escript -.tex (/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/color.cfg) -(/usr/share/texlive/texmf-dist/tex/latex/graphics/dvipsnam.def -Chapter 3. -[45]))g++ -o debian/tmp3/posix/dudley/src/Assemble_PDE_Single_2D.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/Assemble_PDE_Single_2D.cpp - -Underfull \hbox (badness 1648) in paragraph at lines 79--79 -[] \OT1/ptm/m/sc/9 Fig-ure 3.1\OT1/ptm/m/n/9 : []De-pen-dency of func-tion spac -es in []. An ar-row in-di-cates that a func-tion in the - -LaTeX Warning: Citation `LBB' on page 46 undefined on input line 83. - -[46 -(/usr/share/texlive/texmf-dist/tex/latex/float/float.sty ]) -(/usr/share/texlive/texmf-dist/tex/latex/natbib/natbib.sty - -LaTeX Warning: Citation `NUMPY' on page 47 undefined on input line 150. - -[47)] +(/usr/share/texlive/texmf-dist/tex/latex/graphics/dvipsnam.def)) +(/usr/share/texlive/texmf-dist/tex/latex/float/float.sty) +(/usr/share/texlive/texmf-dist/tex/latex/natbib/natbib.sty) (/usr/share/texlive/texmf-dist/tex/latex/cite/chapterbib.sty) \gdef\@extra@binfo{@-1}\@writefile{toc}{\gdef \the@ipfilectr{@-1}}\@writefile{l of}{\gdef \the@ipfilectr{@-1}}\@writefile{lot}{\gdef \the@ipfilectr{@-1}} @@ -10861,17 +10861,12 @@ def \the@ipfilectr{}}\@writefile{lot}{\gdef \the@ipfilectr{}} ) (/usr/share/texlive/texmf-dist/tex/latex/upquote/upquote.sty) (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/ver -info.tex) [48] +info.tex) [37] Writing index file cookbook.idx (/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1ptm.fd) - -LaTeX Warning: Citation `NETCDF' on page 49 undefined on input line 318. - -[49 ] (/usr/share/texlive/texmf-dist/tex/latex/l3backend/l3backend-pdftex.def) (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/coo -kbook.aux +kbook.aux) LaTeX Warning: Label `NEUMAN 2b' multiply defined. @@ -10896,44 +10891,42 @@ LaTeX Warning: Label `sub@fig:ex9b 201' multiply defined. -) [50] [51] +) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/dirac.t +ex *geometry* driver: auto-detecting *geometry* detected driver: pdftex (/usr/share/texlive/texmf-dist/tex/context/base/mkii/supp-pdf.mkii [Loading MPS to PDF converter (version 2006.09.02).] -) [52] (/usr/share/texlive/texmf-dist/tex/latex/epstopdf-pkg/epstopdf-base.sty -(/usr/share/texlive/texmf-dist/tex/latex/latexconfig/epstopdf-sys.cfg)) -(/usr/share/texlive/texmf-dist/tex/latex/hyperref/nameref.sty [53] +) (/usr/share/texlive/texmf-dist/tex/latex/epstopdf-pkg/epstopdf-base.sty +(/usr/share/texlive/texmf-dist/tex/latex/latexconfig/epstopdf-sys.cfg)) [38 +(/usr/share/texlive/texmf-dist/tex/latex/hyperref/nameref.sty ] [12] [63] +six/doc/cookbook/figures/onedheatdiff001.pdf>] [12] Underfull \hbox (badness 4353) in paragraph at lines 185--185 [][]\OT1/ptm/m/n/8 More in-for-ma-tion on Bound-ary Con-di-tions is avail-able at Wikipedia [][]$\OT1/pcr/m/n/8 http : / / en . wikipedia . org / wiki / Bound @@ -10953,8 +10946,7 @@ l.313 T here are various ways to construct domain objects. The simplest form ... ] [15pdfTeX warning (ext4): destination with the same identi +gures/workflow.png>] [15pdfTeX warning (ext4): destination with the same identi fier (name{figure.2.3}) has been already used, duplicate ignored ...shipout:D \box_use:N \l_shipout_box @@ -10962,49 +10954,22 @@ here are various ways to construct domain objects. The simplest form ... ] [16] -(/usr/share/texlive/texmf-dist/tex/latex/listings/lstlang1.sty -Overfull \hbox (30.76083pt too wide) in paragraph at lines 1718--1719 -[][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][ -][][][][][][][][][][][][][][][][][][][][][][][][][][][][] -[66]) -Overfull \hbox (10.1535pt too wide) in paragraph at lines 1742--1743 -\OT1/pcr/m/n/10 Data \OT1/ptm/m/n/10 ob-jects can be con-verted into a numpy st -ruc-tured ar-ray us-ing the com-mands \OT1/pcr/m/n/10 getNumpy \OT1/ptm/m/n/10 -and \OT1/pcr/m/n/10 convertNumpy\OT1/ptm/m/n/10 . -[67] [68 +(/usr/share/texlive/texmf-dist/tex/latex/listings/lstlang1.sty) Underfull \hbox (badness 10000) in paragraph at lines 415--425 -[17]] [69] [70] [71] [18 [72]] +[17] [18] Underfull \hbox (badness 10000) in paragraph at lines 604--605 Underfull \hbox (badness 10000) in paragraph at lines 604--605 -[19] [73] - -LaTeX Warning: Citation `lazyauspdc' on page 74 undefined on input line 2248. - -) [74] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/linearP -DE.tex [20pdfTeX warning (ext4): destination with the same identifier (name{figur +[19] [20pdfTeX warning (ext4): destination with the same identifier (name{figur e.2.4}) has been already used, duplicate ignored ...shipout:D \box_use:N \l_shipout_box l.680 \clearpage ]] [78]g++ -o debian/tmp3/posix/dudley/src/Assemble_PDE.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/Assemble_PDE.cpp - [79] [80] +/doc/cookbook/figures/ttblockspyplot150.png>] Underfull \hbox (badness 10000) in paragraph at lines 684--692 @@ -11016,82 +10981,10 @@ l.776 \clearpage ] [89 ] +spyplot200.png>] Overfull \hbox (3.76056pt too wide) in paragraph at lines 797--798 [][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][ ][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][] @@ -11124,16 +11017,15 @@ l.108 \chapter {Heat Diffusion in Two Dimensions} ]> ] Chapter 3. (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/exa -mple03.tex>] +mple03.tex Underfull \hbox (badness 10000) in paragraph at lines 22--23 @@ -11149,8 +11041,7 @@ LaTeX Warning: Float too large for page by 12.55325pt on input line 232. -[29] [90 ] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/execute +.tex [40] +Chapter 2. + +LaTeX Warning: Citation `OPENMP' on page 41 undefined on input line 46. + + +LaTeX Warning: Citation `MPI' on page 41 undefined on input line 47. + +[41] [42])g++ -o debian/tmp3/posix/dudley/src/Assemble_PDE_Single_3D.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/Assemble_PDE_Single_3D.cpp + [43] [44> ])) -[91 ] [33pdfTeX warning (ext4): destination +ion030.png] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/escript +.tex +Chapter 3. +[45] +Underfull \hbox (badness 1648) in paragraph at lines 79--79 +[] \OT1/ptm/m/sc/9 Fig-ure 3.1\OT1/ptm/m/n/9 : []De-pen-dency of func-tion spac +es in []. An ar-row in-di-cates that a func-tion in the + +LaTeX Warning: Citation `LBB' on page 46 undefined on input line 83. + +[46 ] + +LaTeX Warning: Citation `NUMPY' on page 47 undefined on input line 150. + +[47]g++ -o debian/tmp3/posix/dudley/src/Assemble_interpolate.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/Assemble_interpolate.cpp +> [48 ] [50]g++ -o debian/tmp3/posix/dudley/src/Assemble_PDE_System_2D.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/Assemble_PDE_System_2D.cpp + [51] [52] [53]>] [33pdfTeX warning (ext4): destination with the same identifier (name{figure.3.3}) has been already used, duplicate ig nored ...shipout:D \box_use:N \l_shipout_box @@ -11181,34 +11103,167 @@ l.112 \chapter {Complex Geometries} ] [92 ] [34] +ayavi2n2.png [57] [58]> [59]] [34] Chapter 4. (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/exa -mple04.tex +mple04.tex [60] [61] [62] Underfull \hbox (badness 10000) in paragraph at lines 37--41 -[35] [36pdfTeX warning (ext4): destination with the same identifier (name{figur +[35] [63] [36pdfTeX warning (ext4): destination with the same identifier (name{figur e.4.1}) has been already used, duplicate ignored ...shipout:D \box_use:N \l_shipout_box l.139 \begin{python} ] [37]>] [38 -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/pycad.t -expdfTeX warning (ext4): destina +osix/doc/cookbook/figures/pycadrec.pdf>] [64] +(/usr/share/texlive/texmf-dist/tex/latex/psnfss/omspcr.fd) [37] [38pdfTeX warning (ext4): destina tion with the same identifier (name{figure.4.2}) has been already used, duplica te ignored ...shipout:D \box_use:N \l_shipout_box l.194 \clearpage ] [79] [80] +Underfull \hbox (badness 10000) in paragraph at lines 197--202 + +[39] [40pdfTeX warning (ext4): destination with the same identifier (name{figur +e.4.3}) has been already used, duplicate ignored + ...shipout:D \box_use:N \l_shipout_box + +l.276 \clearpage + ]]) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/exa +mple05.tex + +LaTeX Warning: Citation `MKL' on page 85 undefined on input line 914. + + +LaTeX Warning: Citation `UMFPACK' on page 85 undefined on input line 919. + +[85] + +LaTeX Warning: Citation `Saad' on page 86 undefined on input line 938. + + +LaTeX Warning: Citation `WEISS' on page 86 undefined on input line 943. + + +LaTeX Warning: Citation `WEISS' on page 86 undefined on input line 948. + + +LaTeX Warning: Citation `WEISS' on page 86 undefined on input line 952. + + +LaTeX Warning: Citation `WEISS' on page 86 undefined on input line 973. + + +LaTeX Warning: Citation `WEISS' on page 86 undefined on input line 977. + + +LaTeX Warning: Citation `WEISS' on page 86 undefined on input line 981. + + +LaTeX Warning: Citation `WEISS' on page 86 undefined on input line 985. + + +LaTeX Warning: Citation `Saad' on page 86 undefined on input line 991. + + +LaTeX Warning: Citation `Saad' on page 86 undefined on input line 995. + + +LaTeX Warning: Citation `AMG' on page 86 undefined on input line 999. + + +LaTeX Warning: Citation `Saad' on page 86 undefined on input line 1004. + + +LaTeX Warning: Citation `RILU' on page 86 undefined on input line 1015. + +[86] + +LaTeX Warning: Citation `Trilinos' on page 87 undefined on input line 1043. + + +LaTeX Warning: Citation `AMG' on page 87 undefined on input line 1051. + + +LaTeX Warning: Citation `AMG' on page 87 undefined on input line 1054. + + +LaTeX Warning: Citation `AMG' on page 87 undefined on input line 1057. + + +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/lumping +.tex +Underfull \hbox (badness 10000) in paragraph at lines 18--25 + +[41pdfTeX warning (ext4): destination with the same identifier (name{figure.4.4 +}) has been already used, duplicate ignored + ...shipout:D \box_use:N \l_shipout_box + +l.74 l30= + Line(p3, p0) ] [89 ] [90 ])) +[91 ] [92 ] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/pycad.t +ex Chapter 5. LaTeX Warning: Citation `GMSH' on page 93 undefined on input line 24. @@ -11231,7 +11286,30 @@ mp3/posix/doc/user/figures//trapezoid.pdf>] [97 ] [98 -] [99] [100] +] [99] [100]In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, + from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, + from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, + from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, + from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, + from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, + from /usr/include/boost/shared_ptr.hpp:17, + from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12, + from /usr/include/boost/python/converter/arg_to_python.hpp:15, + from /usr/include/boost/python/call.hpp:15, + from /usr/include/boost/python/object_core.hpp:14, + from /usr/include/boost/python/extract.hpp:16, + from debian/stage3/include/escript/WrappedArray.h:25, + from debian/stage3/include/escript/DataVectorAlt.h:26, + from debian/stage3/include/escript/DataVector.h:24, + from debian/stage3/include/escript/DataAbstract.h:23, + from debian/stage3/include/escript/Data.h:24, + from dudley/src/Dudley.h:31, + from dudley/src/Assemble.h:27, + from dudley/src/Assemble_PDE_Single_2D.cpp:38: +/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' + 36 | BOOST_PRAGMA_MESSAGE( + | ^~~~~~~~~~~~~~~~~~~~ + LaTeX Warning: Citation `GMSH' on page 101 undefined on input line 579. @@ -11243,7 +11321,10 @@ LaTeX Warning: Citation `GMSH' on page 102 undefined on input line 682. -[102] +[102]/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' + 13 | BOOST_HEADER_DEPRECATED("") + | ^~~~~~~~~~~~~~~~~~~~~~~ + LaTeX Warning: Citation `GMSH' on page 103 undefined on input line 698. @@ -11305,18 +11386,9 @@ LaTeX Warning: Citation `LBB' on page 111 undefined on input line 334. -[111]>]) +[111]) (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/darcyfl -ux.tex [112] [113] -Underfull \hbox (badness 10000) in paragraph at lines 197--202 - -[39] [40pdfTeX warning (ext4): destination with the same identifier (name{figur -e.4.3}) has been already used, duplicate ignored - ...shipout:D \box_use:N \l_shipout_box - -l.276 \clearpage - ]) LaTeX Warning: Citation `Muhlhaus2005' on page 115 undefined on input line 28. @@ -11328,22 +11400,10 @@ LaTeX Warning: Citation `LBB' on page 117 undefined on input line 206. -[117]>]) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/exa -mple05.tex +[117] (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/faultsy stem.tex [118 ] [119] [120 -Underfull \hbox (badness 10000) in paragraph at lines 18--25 - -[41]pdfTeX warning (ext4): destination with the same identifier (name{figure.4.4 -}) has been already used, duplicate ignored - ...shipout:D \box_use:N \l_shipout_box - -l.74 l30= - Line(p3, p0) ] [119] [120] [121])) [122] (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/finley. tex Chapter 7. @@ -11359,8 +11419,7 @@ eyMesh.pdf>] [125 ] [126] (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/finleye -lements.texg++ -o debian/tmp3/posix/dudley/src/dudleycpp.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/dudleycpp.cpp -) [127] [128] +lements.tex) [127] [128] Underfull \hbox (badness 1910) in paragraph at lines 383--383 []\OT1/ptm/m/n/10 Table 7.2: Solvers avail-able for [] and the \OT1/pcr/m/n/10 PASO [][]\OT1/ptm/m/n/10 pack-age and the rel-e-vant op-tions in @@ -11383,30 +11442,7 @@ [133] [134 ]) [135] (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/speckle -y.tex [136]In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, - from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, - from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, - from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, - from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, - from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, - from /usr/include/boost/shared_ptr.hpp:17, - from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12, - from /usr/include/boost/python/converter/arg_to_python.hpp:15, - from /usr/include/boost/python/call.hpp:15, - from /usr/include/boost/python/object_core.hpp:14, - from /usr/include/boost/python/extract.hpp:16, - from debian/stage3/include/escript/WrappedArray.h:25, - from debian/stage3/include/escript/DataVectorAlt.h:26, - from debian/stage3/include/escript/DataVector.h:24, - from debian/stage3/include/escript/DataAbstract.h:23, - from debian/stage3/include/escript/Data.h:24, - from dudley/src/Dudley.h:31, - from dudley/src/Assemble.h:27, - from dudley/src/Assemble_interpolate.cpp:18: -/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' - 36 | BOOST_PRAGMA_MESSAGE( - | ^~~~~~~~~~~~~~~~~~~~ - +y.tex [136] Chapter 9. [137]) [138 ] (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/weipa.t -ex/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' - 13 | BOOST_HEADER_DEPRECATED("") - | ^~~~~~~~~~~~~~~~~~~~~~~ - +ex Chapter 10. [139] @@ -11456,14 +11489,51 @@ LaTeX Warning: Citation `TrilinosWeb' on page 146 undefined on input line 205. -[146] [147] +[146]In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, + from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, + from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, + from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, + from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, + from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, + from /usr/include/boost/shared_ptr.hpp:17, + from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12, + from /usr/include/boost/python/converter/arg_to_python.hpp:15, + from /usr/include/boost/python/call.hpp:15, + from /usr/include/boost/python/object_core.hpp:14, + from /usr/include/boost/python/extract.hpp:16, + from debian/stage3/include/escript/WrappedArray.h:25, + from debian/stage3/include/escript/DataVectorAlt.h:26, + from debian/stage3/include/escript/DataVector.h:24, + from debian/stage3/include/escript/DataAbstract.h:23, + from debian/stage3/include/escript/Data.h:24, + from dudley/src/Dudley.h:31, + from dudley/src/Assemble.h:27, + from dudley/src/Assemble_integrate.cpp:18: +/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' + 36 | BOOST_PRAGMA_MESSAGE( + | ^~~~~~~~~~~~~~~~~~~~ + [147]/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' + 13 | BOOST_HEADER_DEPRECATED("") + | ^~~~~~~~~~~~~~~~~~~~~~~ + Underfull \hbox (badness 10000) in paragraph at lines 266--271 Overfull \hbox (0.87425pt too wide) in paragraph at lines 278--279 []\OT1/pcr/m/n/10 "Elasticity-2D" and "Elasticity-3D"\OT1/ptm/m/n/10 : us-ing s moothed ag-gre-ga-tion, Cheby-shev smoother and -[148] [149] [150] +[148] [149]>] +Overfull \hbox (24.65349pt too wide) in paragraph at lines 85--88 +\OT1/ptm/m/n/10 This re-verse spline op-tion un-for-tu-nately does not work for + the [][]\OT1/pcr/m/n/10 getLoopCoords []\OT1/ptm/m/n/10 com-mand, how-ever, th +e [] +[42] [150 [43pdfTeX warning (ext4): destination with the same identifier (name{figur +e.4.5}) has been already used, duplicate ignored + ...shipout:D \box_use:N \l_shipout_box + +l.134 \clearpage + ] Overfull \hbox (63.16116pt too wide) in paragraph at lines 454--455 [][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][ ][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][] @@ -11478,79 +11548,82 @@ [151]) [152] (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/symboli c.tex +Underfull \hbox (badness 10000) in paragraph at lines 137--142 + +[44] [45pdfTeX warning (ext4): destination with the same identifier (name{figur +e.4.6}) has been already used, duplicate ignored + ...shipout:D \box_use:N \l_shipout_box + +l.199 \clearpage + + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' - 36 | BOOST_PRAGMA_MESSAGE( - | ^~~~~~~~~~~~~~~~~~~~ -In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, - from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, - from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, - from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, - from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, - from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, - from /usr/include/boost/shared_ptr.hpp:17, - from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12, - from /usr/include/boost/python/converter/arg_to_python.hpp:15, - from /usr/include/boost/python/call.hpp:15, - from /usr/include/boost/python/object_core.hpp:14, - from /usr/include/boost/python/extract.hpp:16, - from debian/stage3/include/escript/WrappedArray.h:25, - from debian/stage3/include/escript/DataVectorAlt.h:26, - from debian/stage3/include/escript/DataVector.h:24, - from debian/stage3/include/escript/DataAbstract.h:23, - from debian/stage3/include/escript/Data.h:24, - from dudley/src/Dudley.h:31, - from dudley/src/Assemble.h:27, - from dudley/src/Assemble_CopyNodalData.cpp:18: -/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' - 36 | BOOST_PRAGMA_MESSAGE( - | ^~~~~~~~~~~~~~~~~~~~ -/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' - 13 | BOOST_HEADER_DEPRECATED("") - | ^~~~~~~~~~~~~~~~~~~~~~~ -> instead.' - 13 | BOOST_HEADER_DEPRECATED("") - | ^~~~~~~~~~~~~~~~~~~~~~~ -> +/tmp3/posix/doc/user/figures//0RotIso.png>] +Underfull \hbox (badness 10000) in paragraph at lines 202--209 + + +Overfull \hbox (7.5533pt too wide) in paragraph at lines 210--216 +[]\OT1/ptm/m/n/10 Contours have al-ready been dis-cussed in Sec-tion [][]3.3[][ +]. To show sub-domains, we need to go back to [] +[46] [47pdfTeX warning (ext4): destination with the same identifier (name{figur +e.4.7}) has been already used, duplicate ignored + ...shipout:D \box_use:N \l_shipout_box + +l.291 \clearpage + ] [157]) [158] (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/subworl ds.tex Chapter 13. -[159] [160] [161In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, +[159>]] +Underfull \hbox (badness 10000) in paragraph at lines 294--299 + +[48pdfTeX warning (ext4): destination with the same identifier (name{figure.4.8 +}) has been already used, duplicate ignored + ...shipout:D \box_use:N \l_shipout_box + +l.305 \clearpage + + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ -]) [162] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/appendi -x.tex -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/notatio -n.tex -Appendix A. -) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/changes -.tex [163] [164]/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' - 13 | BOOST_HEADER_DEPRECATED("") - | ^~~~~~~~~~~~~~~~~~~~~~~ - -Appendix B. -[165] [166] [167] [168] [169] [170] [171]) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/complet -edevs.tex [172] -Appendix C. -) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/ourrefs -.tex [173] [174] -Appendix D. -(/usr/share/texlive/texmf-dist/tex/latex/listings/lstlang1.sty) -(/usr/share/texlive/texmf-dist/tex/latex/listings/lstlang2.sty) -(/usr/share/texlive/texmf-dist/tex/latex/listings/lstlang3.sty) [175]) + [175]) (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/py3.tex [176] Appendix E. -)) [177] [178] +)/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' + 13 | BOOST_HEADER_DEPRECATED("") + | ^~~~~~~~~~~~~~~~~~~~~~~ +) [177] [178] (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/user.in d [179] [180] [181]) [182] (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/user.bb @@ -11620,7 +11673,30 @@ (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/Models. aux) (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/finley. -aux) +aux)In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, + from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, + from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, + from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, + from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, + from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, + from /usr/include/boost/shared_ptr.hpp:17, + from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12, + from /usr/include/boost/python/converter/arg_to_python.hpp:15, + from /usr/include/boost/python/call.hpp:15, + from /usr/include/boost/python/object_core.hpp:14, + from /usr/include/boost/python/extract.hpp:16, + from debian/stage3/include/escript/WrappedArray.h:25, + from debian/stage3/include/escript/DataVectorAlt.h:26, + from debian/stage3/include/escript/DataVector.h:24, + from debian/stage3/include/escript/DataAbstract.h:23, + from debian/stage3/include/escript/Data.h:24, + from dudley/src/Dudley.h:31, + from dudley/src/Assemble.h:27, + from dudley/src/Assemble_interpolate.cpp:18: +/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' + 36 | BOOST_PRAGMA_MESSAGE( + | ^~~~~~~~~~~~~~~~~~~~ + (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/ripley. aux) (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/speckle @@ -11649,18 +11725,25 @@ ) (see the transcript file for additional information){/usr/share/texlive/texmf-d ist/fonts/enc/dvips/base/8r.enc}/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' + 13 | BOOST_HEADER_DEPRECATED("") + | ^~~~~~~~~~~~~~~~~~~~~~~ +><]) +Chapter 5. + +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/exa +mple07.tex/usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmmi5.pfb>] +Underfull \hbox (badness 10000) in paragraph at lines 154--155 + + +Underfull \hbox (badness 10000) in paragraph at lines 154--155 + +[50< /usr/share/texlive/texmf-dist/fonts/type1/urw/helvetic/uhvr8a.pfb> -Output written on user.pdf (184 pages, 2640303 bytes). +Output written on user.pdf (184 pages, 2640362 bytes). Transcript written on user.log. -cd debian/tmp3/posix/doc/user && makeindex user.idx -This is makeindex, version 2.15 [TeX Live 2020] (kpathsea + Thai support). + [51cd debian/tmp3/posix/doc/user && makeindex user.idx +]This is makeindex, version 2.15 [TeX Live 2020] (kpathsea + Thai support). Scanning input file user.idx....done (716 entries accepted, 12 rejected). Sorting entries........done (7112 comparisons). Generating output file user.ind....done (353 lines written, 0 warnings). Output written in user.ind. Transcript written in user.ilg. -cd debian/tmp3/posix/doc/user && pdflatex -interaction=nonstopmode -recorder -interaction=nonstopmode \\newcommand{\\RepVersion}{-2\\xspace}\\input{user.tex} user.tex -This is pdfTeX, Version 3.14159265-2.6-1.40.21 (TeX Live 2020/Debian) (preloaded format=pdflatex) - restricted \write18 enabled. ->] -Overfull \hbox (24.65349pt too wide) in paragraph at lines 85--88 -\OT1/ptm/m/n/10 This re-verse spline op-tion un-for-tu-nately does not work for - the [][]\OT1/pcr/m/n/10 getLoopCoords []\OT1/ptm/m/n/10 com-mand, how-ever, th -e [] -[42] [43pdfTeX warning (ext4): destination with the same identifier (name{figur -e.4.5}) has been already used, duplicate ignored + +Underfull \hbox (badness 10000) in paragraph at lines 279--280 + + +Underfull \hbox (badness 10000) in paragraph at lines 279--280 + +[52cd debian/tmp3/posix/doc/user && pdflatex -interaction=nonstopmode -recorder -interaction=nonstopmode \\newcommand{\\RepVersion}{-2\\xspace}\\input{user.tex} user.tex +pdfTeX warning (ext4): destination with the same identifier (name{figure.5.1 +}) has been already used, duplicate ignored ...shipout:D \box_use:N \l_shipout_box -l.134 \clearpage - patch level 4 L3 programming layer <2021-01-09> xparse <2020-03-03> (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/user.te @@ -11717,117 +11807,52 @@ Document Class: esysdoc (/usr/share/texlive/texmf-dist/tex/latex/base/book.cls Document Class: book 2020/04/10 v1.4m Standard LaTeX document class -(/usr/share/texlive/texmf-dist/tex/latex/base/bk10.clo)>]) +(/usr/share/texlive/texmf-dist/tex/latex/base/bk10.clo)) (/usr/share/texlive/texmf-dist/tex/latex/geometry/geometry.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics/keyval.sty) -Underfull \hbox (badness 10000) in paragraph at lines 137--142 - -[44] [45pdfTeX warning (ext4): destination with the same identifier (name{figur -e.4.6}) has been already used, duplicate ignored - ...shipout:D \box_use:N \l_shipout_box - -l.199 \clearpage - + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' - 36 | BOOST_PRAGMA_MESSAGE( - | ^~~~~~~~~~~~~~~~~~~~ -)) +(/usr/share/texlive/texmf-dist/tex/generic/iftex/iftex.sty))>] Package geometry Warning: Over-specification in `h'-direction. `width' (478.00812pt) is ignored. -)/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' - 13 | BOOST_HEADER_DEPRECATED("") - | ^~~~~~~~~~~~~~~~~~~~~~~ - (/usr/share/texlive/texmf-dist/tex/latex/psnfss/times.sty) -(/usr/share/texlive/texmf-dist/tex/latex/listings/listings.sty> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' - 36 | BOOST_PRAGMA_MESSAGE( - | ^~~~~~~~~~~~~~~~~~~~ - -(/usr/share/texlive/texmf-dist/tex/generic/iftex/ifpdf.sty)/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' - 13 | BOOST_HEADER_DEPRECATED("") - | ^~~~~~~~~~~~~~~~~~~~~~~ +(/usr/share/texlive/texmf-dist/tex/latex/listings/listings.cfg)) +(/usr/share/texlive/texmf-dist/tex/generic/iftex/ifpdf.sty [53)]) [54pdfTeX warning (ext4): destination with t +he same identifier (name{figure.5.2}) has been already used, duplicate ignored + ...shipout:D \box_use:N \l_shipout_box + +l.122 \chapter + {Seismic Wave Propagation} ] +(/usr/share/texlive/texmf-dist/tex/latex/base/makeidx.sty) +Chapter 6. -(/usr/share/texlive/texmf-dist/tex/latex/base/makeidx.sty> ] +(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsmath.sty For additional information on amsmath, use the `?' option. (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amstext.sty (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsgen.sty)) -(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsbsy.sty) -(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsopn.sty) -Underfull \hbox (badness 10000) in paragraph at lines 202--209 - +(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsbsy.sty +Underfull \hbox (badness 10000) in paragraph at lines 139--145 -Overfull \hbox (7.5533pt too wide) in paragraph at lines 210--216 -[]\OT1/ptm/m/n/10 Contours have al-ready been dis-cussed in Sec-tion [][]3.3[][ -]. To show sub-domains, we need to go back to [] -[46] [47pdfTeX warning (ext4): destination with the same identifier (name{figur -e.4.7}) has been already used, duplicate ignored - ...shipout:D \box_use:N \l_shipout_box - -l.291 \clearpage - + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ -)/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' +pdfTeX warning (ext4): destination with the same identifier (name{table.6.1} +) has been already used, duplicate ignored + ...shipout:D \box_use:N \l_shipout_box + +l.156 # + set initial values for first two time steps with source terms] +(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsopn.sty))/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -(/usr/share/texlive/texmf-dist/tex/generic/pdftexcmds/pdftexcmds.sty +(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amsfonts.sty) +(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amssymb.sty) +(/usr/share/texlive/texmf-dist/tex/latex/underscore/underscore.sty) +(/usr/share/texlive/texmf-dist/tex/latex/hyperref/hyperref.sty +(/usr/share/texlive/texmf-dist/tex/generic/ltxcmds/ltxcmds.sty) +(/usr/share/texlive/texmf-dist/tex/generic/pdftexcmds/pdftexcmds.sty [57] +[58pdfTeX warning (ext4): destination with the same identifier (name{figure.6.1 +}) has been already used, duplicate ignored + ...shipout:D \box_use:N \l_shipout_box + +l.214 \clearpage + < +/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/figu +res/ex08pw650.png (PNG copy)> ] (/usr/share/texlive/texmf-dist/tex/generic/infwarerr/infwarerr.sty)) (/usr/share/texlive/texmf-dist/tex/generic/kvsetkeys/kvsetkeys.sty) (/usr/share/texlive/texmf-dist/tex/generic/kvdefinekeys/kvdefinekeys.sty) (/usr/share/texlive/texmf-dist/tex/generic/pdfescape/pdfescape.sty) (/usr/share/texlive/texmf-dist/tex/latex/hycolor/hycolor.sty) -(/usr/share/texlive/texmf-dist/tex/latex/letltxmacro/letltxmacro.sty) -(/usr/share/texlive/texmf-dist/tex/latex/auxhook/auxhook.sty)>] -(/usr/share/texlive/texmf-dist/tex/latex/kvoptions/kvoptions.sty -Underfull \hbox (badness 10000) in paragraph at lines 294--299 +(/usr/share/texlive/texmf-dist/tex/latex/letltxmacro/letltxmacro.sty +Underfull \hbox (badness 10000) in paragraph at lines 218--223 -[48pdfTeX warning (ext4): destination with the same identifier (name{figure.4.8 +[59) +(/usr/share/texlive/texmf-dist/tex/latex/auxhook/auxhook.stypdfTeX warning (ext4): destination with the same identifier (name{figure.6.2 }) has been already used, duplicate ignored ...shipout:D \box_use:N \l_shipout_box -l.305 \clearpage - + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' - 36 | BOOST_PRAGMA_MESSAGE( - | ^~~~~~~~~~~~~~~~~~~~ -) -(/usr/share/texlive/texmf-dist/tex/latex/rerunfilecheck/rerunfilecheck.sty/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' - 13 | BOOST_HEADER_DEPRECATED("") - | ^~~~~~~~~~~~~~~~~~~~~~~ - -(/usr/share/texlive/texmf-dist/tex/generic/uniquecounter/uniquecounter.sty)))>]) -(/usr/share/texlive/texmf-dist/tex/latex/oberdiek/hypcap.sty) -Chapter 5. +(/usr/share/texlive/texmf-dist/tex/latex/hyperref/hpdftex.def>] +(/usr/share/texlive/texmf-dist/tex/latex/base/atveryend-ltx.sty) +(/usr/share/texlive/texmf-dist/tex/latex/rerunfilecheck/rerunfilecheck.sty +(/usr/share/texlive/texmf-dist/tex/generic/uniquecounter/uniquecounter.sty -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/exa -mple07.tex -(/usr/share/texlive/texmf-dist/tex/latex/fancyhdr/fancyhdr.sty) [49]In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, - from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, - from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, - from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, - from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, - from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, - from /usr/include/boost/shared_ptr.hpp:17, - from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12, - from /usr/include/boost/python/converter/arg_to_python.hpp:15, - from /usr/include/boost/python/call.hpp:15, - from /usr/include/boost/python/object_core.hpp:14, - from /usr/include/boost/python/extract.hpp:16, - from debian/stage3/include/escript/WrappedArray.h:25, - from debian/stage3/include/escript/DataVectorAlt.h:26, - from debian/stage3/include/escript/DataVector.h:24, - from debian/stage3/include/escript/DataAbstract.h:23, - from debian/stage3/include/escript/Data.h:24, - from dudley/src/Dudley.h:31, - from dudley/src/Assemble.h:27, - from dudley/src/Assemble_LumpedSystem.cpp:18: -/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' - 36 | BOOST_PRAGMA_MESSAGE( - | ^~~~~~~~~~~~~~~~~~~~ +Package natbib Warning: Citation `Cerjan1985' on page 60 undefined on input lin +e 293. +[60)))] +(/usr/share/texlive/texmf-dist/tex/latex/oberdiek/hypcap.sty) +(/usr/share/texlive/texmf-dist/tex/latex/fancyhdr/fancyhdr.sty) (/usr/share/texlive/texmf-dist/tex/latex/fncychap/fncychap.sty)) (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/user_de -fs.tex -Underfull \hbox (badness 10000) in paragraph at lines 154--155 - - -Underfull \hbox (badness 10000) in paragraph at lines 154--155 - -[50]/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' - 13 | BOOST_HEADER_DEPRECATED("") - | ^~~~~~~~~~~~~~~~~~~~~~~ - (/usr/share/texlive/texmf-dist/tex/latex/subfigure/subfigure.sty +fs.tex (/usr/share/texlive/texmf-dist/tex/latex/subfigure/subfigure.sty **************************************** * Local config file subfigure.cfg used * **************************************** -(/usr/share/texlive/texmf-dist/tex/latex/subfigure/subfigure.cfg)) +(/usr/share/texlive/texmf-dist/tex/latex/subfigure/subfigure.cfg)) [61pdfTeX warning (ext4): destination with the same identifier (name{figur +e.6.3}) has been already used, duplicate ignored + ...shipout:D \box_use:N \l_shipout_box + +l.392 \clearpage + ))) (/usr/share/texlive/texmf-dist/tex/latex/upquote/upquote.sty -Underfull \hbox (badness 10000) in paragraph at lines 279--280 - - -Underfull \hbox (badness 10000) in paragraph at lines 279--280 - -[52pdfTeX warning (ext4): destination with the same identifier (name{figure.5.1 -}) has been already used, duplicate ignored - ...shipout:D \box_use:N \l_shipout_box - -l.280 - ] [62)pdfTeX warning (ext4): destination with + the same identifier (name{figure.6.4}) has been already used, duplicate ignore +d + ...shipout:D \box_use:N \l_shipout_box + +l.392 \clearpage + (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/execute .aux) (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/escript -.aux) +.aux) + ]) (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/Models. aux) (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/finley. @@ -12001,7 +11996,7 @@ (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/speckle y.aux) (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/weipa.a -ux)>] +ux) (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/trilino s.aux) (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/symboli @@ -12014,39 +12009,36 @@ *geometry* detected driver: pdftex (/usr/share/texlive/texmf-dist/tex/context/base/mkii/supp-pdf.mkii [Loading MPS to PDF converter (version 2006.09.02).] -) [53]Install file: "escriptcore/src/AbstractReducer.h" as "debian/stage3/include/escript/AbstractReducer.h" -) [54pdfTeX warning (ext4): destination with t -he same identifier (name{figure.5.2}) has been already used, duplicate ignored +) (/usr/share/texlive/texmf-dist/tex/latex/epstopdf-pkg/epstopdf-base.sty +Underfull \hbox (badness 10000) in paragraph at lines 395--399 + +) [63pdfTeX warning (ext4): destination with the same identifier (name{figure.6 +.5}) has been already used, duplicate ignored ...shipout:D \box_use:N \l_shipout_box -l.122 \chapter - {Seismic Wave Propagation} ] (/usr/share/texlive/texmf-dist/tex/latex/epstopdf-pkg/epstopdf-base.sty -Chapter 6. +l.125 \chapter + {3D Seismic Wave Propagation} ]) [64pdfTeX warning (ext4): destination with the same identifier (name{figure. +6.6}) has been already used, duplicate ignored + ...shipout:D \box_use:N \l_shipout_box + +l.125 \chapter + {3D Seismic Wave Propagation} ] +Chapter 7. (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/exa -mple08.tex -(/usr/share/texlive/texmf-dist/tex/latex/latexconfig/epstopdf-sys.cfg)) +mple09.tex (/usr/share/texlive/texmf-dist/tex/latex/hyperref/nameref.sty -Underfull \hbox (badness 10000) in paragraph at lines 18--24 - -[55] (/usr/share/texlive/texmf-dist/tex/latex/refcount/refcount.sty) (/usr/share/texlive/texmf-dist/tex/generic/gettitlestring/gettitlestring.sty)) -Underfull \hbox (badness 10000) in paragraph at lines 139--145 +(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1phv.fd) +Underfull \hbox (badness 10000) in paragraph at lines 17--21 -[56 -(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1phv.fd)pdfTeX warning (ext4): destination with the same identifier (name{table.6.1} -) has been already used, duplicate ignored - ...shipout:D \box_use:N \l_shipout_box - -l.156 # - set initial values for first two time steps with source terms]g++ -o debian/tmp3/posix/dudley/src/DomainFactory.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/DomainFactory.cpp - [1{/var/lib/texmf/fo -nts/map/pdftex/updmap/pdftex.map}] +[65 [1{/var/lib/texmf/fo +nts/map/pdftex/updmap/pdftex.map}]] (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/copyrig hts.tex (/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1pcr.fd) (/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsa.fd) @@ -12055,131 +12047,77 @@ e.tex [2]) [3] (/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1ptm.fd) [4] (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/current -dev.tex [57 [5])] [6] -[58pdfTeX warning (ext4): destination with the same identifier (name{figure.6.1 -}) has been already used, duplicate ignored - ...shipout:D \box_use:N \l_shipout_box - -l.214 \clearpage - < -/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/figu -res/ex08pw650.png (PNG copy)> ] +dev.tex [5]) [6] (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/user.to c [7] [8] [9]) [10] (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/Tutoria -lPDE.tex +lPDE.tex [66 Chapter 1. (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/firstst -ep.tex [11 -Underfull \hbox (badness 10000) in paragraph at lines 218--223 - -[59]pdfTeX warning (ext4): destination with the same identifier (name{figure.6.2 -}) has been already used, duplicate ignored - ...shipout:D \box_use:N \l_shipout_box - -l.273 t= - t+h; n=n+1 ]>] - -Package natbib Warning: Citation `Cerjan1985' on page 60 undefined on input lin -e 293. - -[60] [14] [61pdfTeX warning (ext4): destination with the same identifier (name{figur -e.6.3}) has been already used, duplicate ignored - ...shipout:D \box_use:N \l_shipout_box - -l.392 \clearpage - ]>] [62pdfTeX warning (ext4): destination with - the same identifier (name{figure.6.4}) has been already used, duplicate ignore -d - ...shipout:D \box_use:N \l_shipout_box - -l.392 \clearpage - - ] [17 ]) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/diffusi -on.tex -Underfull \hbox (badness 10000) in paragraph at lines 395--399 - -) [63pdfTeX warning (ext4): destination with the same identifier (name{figure.6 -.5}) has been already used, duplicate ignored - ...shipout:D \box_use:N \l_shipout_box - -l.125 \chapter - {3D Seismic Wave Propagation} ] [64pdfTeX warning (ext4): destination with the same identifier (name{figure. -6.6}) has been already used, duplicate ignored - ...shipout:D \box_use:N \l_shipout_box - -l.125 \chapter - {3D Seismic Wave Propagation} ] -Chapter 7. - -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/exa -mple09.tex [18 ] [19] -Underfull \hbox (badness 10000) in paragraph at lines 17--21 - -[65] [20] [21] [66] [67] [68 ] [67 [12] [68 ] [22] [69pdfTeX warning ( +x/doc/cookbook/figures/gmsh-example09msh3d.png (PNG copy)>]] +(/usr/share/texlive/texmf-dist/tex/latex/listings/lstlang1.sty) [69pdfTeX warning ( ext4): destination with the same identifier (name{figure.7.1}) has been already used, duplicate ignored ...shipout:D \box_use:N \l_shipout_box l.186 \clearpage ]) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/wave.te -x [23 +/doc/cookbook/figures/gmsh-example09lc.png (PNG copy)>] [13 ]In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, + from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, + from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, + from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, + from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, + from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, + from /usr/include/boost/shared_ptr.hpp:17, + from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12, + from /usr/include/boost/python/converter/arg_to_python.hpp:15, + from /usr/include/boost/python/call.hpp:15, + from /usr/include/boost/python/object_core.hpp:14, + from /usr/include/boost/python/extract.hpp:16, + from debian/stage3/include/escript/WrappedArray.h:25, + from debian/stage3/include/escript/DataVectorAlt.h:26, + from debian/stage3/include/escript/DataVector.h:24, + from debian/stage3/include/escript/DataAbstract.h:23, + from debian/stage3/include/escript/Data.h:24, + from dudley/src/Dudley.h:31, + from dudley/src/Assemble.h:27, + from dudley/src/Assemble_PDE_System_3D.cpp:41: +/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' + 36 | BOOST_PRAGMA_MESSAGE( + | ^~~~~~~~~~~~~~~~~~~~ +/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' + 13 | BOOST_HEADER_DEPRECATED("") + | ^~~~~~~~~~~~~~~~~~~~~~~ + Underfull \hbox (badness 10000) in paragraph at lines 202--209 Overfull \hbox (25.36078pt too wide) in paragraph at lines 222--223 [][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][ ][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][] -) ]] [71 ] [72] [24 ] +/ex09b00440.png (PNG copy)>] [72] Chapter 8. (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/exa -mple10.tex +mple10.tex [14] Package natbib Warning: Citation `Blakely1995' on page 73 undefined on input li ne 27. -[73] [25 ] [74] [26] +[73] [74] [15] [16 ] Underfull \hbox (badness 10000) in paragraph at lines 93--97 [75] [76pdfTeX warning (ext4): destination with the same identifier (name{figur @@ -12193,39 +12131,50 @@ l.177 \clearpage ]Install file: "escriptcore/src/SolverOptions.h" as "debian/stage3/include/escript/SolverOptions.h" -)Install file: "paso/src/Transport.h" as "debian/stage3/include/paso/Transport.h" - -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/heatedb -lock.tex [29 ] [30]> ]g++ -o debian/tmp3/posix/dudley/src/DudleyDomain.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/DudleyDomain.cpp - [33]) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/slip.te -x [34] [35 ]>] -[36 [77 ]) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/diffusi +on.texIn file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, + from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, + from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, + from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, + from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, + from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, + from /usr/include/boost/shared_ptr.hpp:17, + from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12, + from /usr/include/boost/python/converter/arg_to_python.hpp:15, + from /usr/include/boost/python/call.hpp:15, + from /usr/include/boost/python/object_core.hpp:14, + from /usr/include/boost/python/extract.hpp:16, + from debian/stage3/include/escript/WrappedArray.h:25, + from debian/stage3/include/escript/DataVectorAlt.h:26, + from debian/stage3/include/escript/DataVector.h:24, + from debian/stage3/include/escript/DataAbstract.h:23, + from debian/stage3/include/escript/Data.h:24, + from dudley/src/Dudley.h:31, + from dudley/src/Assemble.h:27, + from dudley/src/Assemble_AverageElementData.cpp:18: +/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' + 36 | BOOST_PRAGMA_MESSAGE( + | ^~~~~~~~~~~~~~~~~~~~ + [18g++ -o debian/tmp3/posix/dudley/src/Assemble_LumpedSystem.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/Assemble_LumpedSystem.cpp + ]/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' + 13 | BOOST_HEADER_DEPRECATED("") + | ^~~~~~~~~~~~~~~~~~~~~~~ + [19] [20] [21]> ] [24 ] [25 ] [26>]] [77pdfTeX w arning (ext4): destination with the same identifier (name{figure.8.3}) has been already used, duplicate ignored ...shipout:D \box_use:N \l_shipout_box @@ -12237,12 +12186,73 @@ l.177 \clearpage ] [37]) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/dirac.t -ex [38 ]g++ -o debian/tmp3/posix/dudley/src/ElementFile.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/ElementFile.cpp - +/doc/cookbook/figures/mayavi2_cell2point.png [27] +(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1pcr.fd) [28 ]) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/heatedb +lock.tex [29 ] [30In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, + from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, + from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, + from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, + from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, + from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, + from /usr/include/boost/shared_ptr.hpp:17, + from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12, + from /usr/include/boost/python/converter/arg_to_python.hpp:15, + from /usr/include/boost/python/call.hpp:15, + from /usr/include/boost/python/object_core.hpp:14, + from /usr/include/boost/python/extract.hpp:16, + from debian/stage3/include/escript/WrappedArray.h:25, + from debian/stage3/include/escript/DataVectorAlt.h:26, + from debian/stage3/include/escript/DataVector.h:24, + from debian/stage3/include/escript/DataAbstract.h:23, + from debian/stage3/include/escript/Data.h:24, + from dudley/src/Dudley.h:31, + from dudley/src/Assemble.h:27, + from dudley/src/Assemble_CopyElementData.cpp:18: +/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' + 36 | BOOST_PRAGMA_MESSAGE( + | ^~~~~~~~~~~~~~~~~~~~ +]/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' + 13 | BOOST_HEADER_DEPRECATED("") + | ^~~~~~~~~~~~~~~~~~~~~~~ + [31]) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/stokesf +low.texIn file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, + from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, + from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, + from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, + from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, + from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, + from /usr/include/boost/shared_ptr.hpp:17, + from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12, + from /usr/include/boost/python/converter/arg_to_python.hpp:15, + from /usr/include/boost/python/call.hpp:15, + from /usr/include/boost/python/object_core.hpp:14, + from /usr/include/boost/python/extract.hpp:16, + from debian/stage3/include/escript/WrappedArray.h:25, + from debian/stage3/include/escript/DataVectorAlt.h:26, + from debian/stage3/include/escript/DataVector.h:24, + from debian/stage3/include/escript/DataAbstract.h:23, + from debian/stage3/include/escript/Data.h:24, + from dudley/src/Dudley.h:31, + from dudley/src/Assemble.h:27, + from dudley/src/Assemble_CopyNodalData.cpp:18: +/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' + 36 | BOOST_PRAGMA_MESSAGE( + | ^~~~~~~~~~~~~~~~~~~~ + [32 ]/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' + 13 | BOOST_HEADER_DEPRECATED("") + | ^~~~~~~~~~~~~~~~~~~~~~~ + [33]> ] Underfull \hbox (badness 10000) in paragraph at lines 180--184 [78] [79pdfTeX warning (ext4): destination with the same identifier (name{figur @@ -12257,7 +12267,7 @@ l.246 \clearpage ] +-escript-5.6/debian/tmp3/posix/doc/cookbook/figures/ex10bpot2.png (PNG copy)>]) [80pdfTeX warning (ext4): destination with the same identifier (name{figure.8.7 }) has been already used, duplicate ignored ...shipout:D \box_use:N \l_shipout_box @@ -12265,9 +12275,20 @@ l.246 \clearpage ] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/slip.te +x [34] [35 ] Underfull \hbox (badness 10000) in paragraph at lines 275--281 -[81] [82] [83pdfTeX warning (ext4): destination with the same identifier (name{ +[81] +[36 ] [37] [82]) [83pdfTeX warning (ext4): destination with the same identifier (name{ figure.8.8}) has been already used, duplicate ignored ...shipout:D \box_use:N \l_shipout_box @@ -12280,7 +12301,9 @@ ] -[84pdfTeX warning (ext4): destination with the same identifier (name{figure.8.1 + +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/dirac.t +ex[84pdfTeX warning (ext4): destination with the same identifier (name{figure.8.1 0}) has been already used, duplicate ignored ...shipout:D \box_use:N \l_shipout_box @@ -12293,11 +12316,12 @@ l.449 \clearpage ]) [86] +/doc/cookbook/figures/ex10q_boundeff_zoom.pdf [38>]) [86] Chapter 9. (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/exa -mple11.tex +mple11.tex -Output written on cookbook.pdf (89 pages, 4391834 bytes). +.pfb> +Output written on cookbook.pdf (89 pages, 4391967 bytes). Transcript written on cookbook.log. cd debian/tmp3/posix/doc/cookbook && pdflatex -interaction=nonstopmode -recorder -interaction=nonstopmode \\newcommand{\\RepVersion}{-2\\xspace}\\input{cookbook.tex} cookbook.tex This is pdfTeX, Version 3.14159265-2.6-1.40.21 (TeX Live 2020/Debian) (preloaded format=pdflatex) restricted \write18 enabled. ->])) [39 patch level 4 L3 programming layer <2021-01-09> xparse <2020-03-03> (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/coo @@ -12502,112 +12524,84 @@ Package geometry Warning: Over-specification in `h'-direction. `width' (478.00812pt) is ignored. -)In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, - from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, - from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, - from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, - from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, - from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, - from /usr/include/boost/shared_ptr.hpp:17, - from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12, - from /usr/include/boost/python/converter/arg_to_python.hpp:15, - from /usr/include/boost/python/call.hpp:15, - from /usr/include/boost/python/object_core.hpp:14, - from /usr/include/boost/python/extract.hpp:16, - from debian/stage3/include/escript/WrappedArray.h:25, - from debian/stage3/include/escript/DataVectorAlt.h:26, - from debian/stage3/include/escript/DataVector.h:24, - from debian/stage3/include/escript/DataAbstract.h:23, - from debian/stage3/include/escript/Data.h:24, - from debian/stage3/include/dudley/Dudley.h:31, - from dudley/src/dudleycpp.cpp:18: -/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' - 36 | BOOST_PRAGMA_MESSAGE( - | ^~~~~~~~~~~~~~~~~~~~ -/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' - 13 | BOOST_HEADER_DEPRECATED("") - | ^~~~~~~~~~~~~~~~~~~~~~~ - (/usr/share/texlive/texmf-dist/tex/latex/psnfss/times.sty) +) (/usr/share/texlive/texmf-dist/tex/latex/psnfss/times.sty) (/usr/share/texlive/texmf-dist/tex/latex/listings/listings.sty (/usr/share/texlive/texmf-dist/tex/latex/listings/lstmisc.sty) (/usr/share/texlive/texmf-dist/tex/latex/listings/listings.cfg)) (/usr/share/texlive/texmf-dist/tex/generic/iftex/ifpdf.sty) (/usr/share/texlive/texmf-dist/tex/latex/base/makeidx.sty) -(/usr/share/texlive/texmf-dist/tex/latex/url/url.sty)>] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/execute -.tex -(/usr/share/texlive/texmf-dist/tex/latex/tools/xspace.sty [40)] +(/usr/share/texlive/texmf-dist/tex/latex/url/url.sty) +(/usr/share/texlive/texmf-dist/tex/latex/tools/xspace.sty) (/usr/share/texlive/texmf-dist/tex/latex/graphics/graphicx.sty -Chapter 2. -[41] (/usr/share/texlive/texmf-dist/tex/latex/graphics/graphics.sty -(/usr/share/texlive/texmf-dist/tex/latex/graphics/trig.sty) [42 -(/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/graphics.cfg]) -(/usr/share/texlive/texmf-dist/tex/latex/graphics-def/pdftex.def)))) [43 -(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsmath.sty] [44] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/escript -.tex +(/usr/share/texlive/texmf-dist/tex/latex/graphics/trig.sty) +(/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/graphics.cfg) +(/usr/share/texlive/texmf-dist/tex/latex/graphics-def/pdftex.def))) +(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsmath.sty For additional information on amsmath, use the `?' option. (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amstext.sty (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsgen.sty)) -Chapter 3. -[45] -(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsbsy.sty)g++ -o debian/tmp3/posix/dudley/src/ElementFile_distributeByRankOfDOF.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/ElementFile_distributeByRankOfDOF.cpp - -(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsopn.sty) -Underfull \hbox (badness 1648) in paragraph at lines 79--79 -[] \OT1/ptm/m/sc/9 Fig-ure 3.1\OT1/ptm/m/n/9 : []De-pen-dency of func-tion spac -es in []. An ar-row in-di-cates that a func-tion in the -[46 ]) -(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amsfonts.sty) [47] +(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsbsy.sty) +(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsopn.sty)) +(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amsfonts.sty) (/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amssymb.sty) (/usr/share/texlive/texmf-dist/tex/latex/underscore/underscore.sty) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/hyperref.sty -(/usr/share/texlive/texmf-dist/tex/generic/ltxcmds/ltxcmds.sty) [48] +(/usr/share/texlive/texmf-dist/tex/generic/ltxcmds/ltxcmds.sty>)] (/usr/share/texlive/texmf-dist/tex/generic/pdftexcmds/pdftexcmds.sty -(/usr/share/texlive/texmf-dist/tex/generic/infwarerr/infwarerr.sty) [49 ]) -(/usr/share/texlive/texmf-dist/tex/generic/kvsetkeys/kvsetkeys.sty) [50] -(/usr/share/texlive/texmf-dist/tex/generic/kvdefinekeys/kvdefinekeys.sty) [51] +(/usr/share/texlive/texmf-dist/tex/generic/infwarerr/infwarerr.sty)))) [39 +(/usr/share/texlive/texmf-dist/tex/latex/fncychap/fncychap.sty]) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/execute +.tex [40) (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/coo -kbook_defs.tex (/usr/share/texlive/texmf-dist/tex/latex/subfigure/subfigure.sty -**************************************** +kbook_defs.tex] (/usr/share/texlive/texmf-dist/tex/latex/subfigure/subfigure.sty + +Chapter 2. +[41]**************************************** * Local config file subfigure.cfg used * **************************************** -(/usr/share/texlive/texmf-dist/tex/latex/subfigure/subfigure.cfg)) [63] -(/usr/share/texlive/texmf-dist/tex/latex/graphics/epsfig.sty) +(/usr/share/texlive/texmf-dist/tex/latex/subfigure/subfigure.cfg)) +(/usr/share/texlive/texmf-dist/tex/latex/graphics/epsfig.sty [42)] (/usr/share/texlive/texmf-dist/tex/latex/graphics/color.sty -(/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/color.cfg)) -(/usr/share/texlive/texmf-dist/tex/latex/base/alltt.sty) +(/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/color.cfg))) [43 +(/usr/share/texlive/texmf-dist/tex/latex/base/alltt.sty]) [44] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/escript +.tex (/usr/share/texlive/texmf-dist/tex/latex/base/textcomp.sty) -(/usr/share/texlive/texmf-dist/tex/latex/setspace/setspace.sty) +(/usr/share/texlive/texmf-dist/tex/latex/setspace/setspace.sty +Chapter 3. +[45)] (/usr/share/texlive/texmf-dist/tex/latex/xcolor/xcolor.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/color.cfg) -(/usr/share/texlive/texmf-dist/tex/latex/graphics/dvipsnam.def [64] -(/usr/share/texlive/texmf-dist/tex/latex/psnfss/omspcr.fd))) -(/usr/share/texlive/texmf-dist/tex/latex/float/float.sty) [65] +(/usr/share/texlive/texmf-dist/tex/latex/graphics/dvipsnam.def +Underfull \hbox (badness 1648) in paragraph at lines 79--79 +[] \OT1/ptm/m/sc/9 Fig-ure 3.1\OT1/ptm/m/n/9 : []De-pen-dency of func-tion spac +es in []. An ar-row in-di-cates that a func-tion in the +[46 ])) +(/usr/share/texlive/texmf-dist/tex/latex/float/float.sty) [47] (/usr/share/texlive/texmf-dist/tex/latex/natbib/natbib.sty) (/usr/share/texlive/texmf-dist/tex/latex/cite/chapterbib.sty) \gdef\@extra@binfo{@-1}\@writefile{toc}{\gdef \the@ipfilectr{@-1}}\@writefile{l @@ -12617,21 +12611,18 @@ (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/eli st.tex (/usr/share/texlive/texmf-dist/tex/latex/listing/listing.sty Package `listing', V1.2, <1999/05/25> -)) +)) [48 \gdef\@extra@binfo{}\@writefile{toc}{\gdef \the@ipfilectr{}}\@writefile{lof}{\g def \the@ipfilectr{}}\@writefile{lot}{\gdef \the@ipfilectr{}} -) (/usr/share/texlive/texmf-dist/tex/latex/upquote/upquote.sty) +)] (/usr/share/texlive/texmf-dist/tex/latex/upquote/upquote.sty) (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/ver info.tex) -Overfull \hbox (30.76083pt too wide) in paragraph at lines 1718--1719 -[][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][ -][][][][][][][][][][][][][][][][][][][][][][][][][][][][] -[66] Writing index file cookbook.idx -(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1ptm.fd) +(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1ptm.fd [49) ] (/usr/share/texlive/texmf-dist/tex/latex/l3backend/l3backend-pdftex.def) (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/coo -kbook.aux +kbook.aux [50] [51 LaTeX Warning: Label `NEUMAN 2b' multiply defined. @@ -12656,54 +12647,49 @@ LaTeX Warning: Label `sub@fig:ex9b 201' multiply defined. -) -Overfull \hbox (10.1535pt too wide) in paragraph at lines 1742--1743 -\OT1/pcr/m/n/10 Data \OT1/ptm/m/n/10 ob-jects can be con-verted into a numpy st -ruc-tured ar-ray us-ing the com-mands \OT1/pcr/m/n/10 getNumpy \OT1/ptm/m/n/10 -and \OT1/pcr/m/n/10 convertNumpy\OT1/ptm/m/n/10 . -[67] +)] +[52] [53] *geometry* driver: auto-detecting *geometry* detected driver: pdftex (/usr/share/texlive/texmf-dist/tex/context/base/mkii/supp-pdf.mkii [Loading MPS to PDF converter (version 2006.09.02).] -) (/usr/share/texlive/texmf-dist/tex/latex/epstopdf-pkg/epstopdf-base.sty [68] -(/usr/share/texlive/texmf-dist/tex/latex/latexconfig/epstopdf-sys.cfg)) [69] -(/usr/share/texlive/texmf-dist/tex/latex/hyperref/nameref.sty [70] -(/usr/share/texlive/texmf-dist/tex/latex/refcount/refcount.sty [71]) -(/usr/share/texlive/texmf-dist/tex/generic/gettitlestring/gettitlestring.sty)) [72] +) (/usr/share/texlive/texmf-dist/tex/latex/epstopdf-pkg/epstopdf-base.sty [54 +(/usr/share/texlive/texmf-dist/tex/latex/latexconfig/epstopdf-sys.cfg])) +Underfull \vbox (badness 1348) has occurred while \output is active [55 +(/usr/share/texlive/texmf-dist/tex/latex/hyperref/nameref.sty] +(/usr/share/texlive/texmf-dist/tex/latex/refcount/refcount.sty) +[56] +(/usr/share/texlive/texmf-dist/tex/generic/gettitlestring/gettitlestring.sty [57)]) [58] (/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1phv.fd) -(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1pcr.fd) -(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsa.fd) +(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1pcr.fd [59) +(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsa.fd)] (/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsb.fd) [1{/var/lib/texmf/fo -nts/map/pdftex/updmap/pdftex.map}] +nts/map/pdftex/updmap/pdftex.map}] [60] (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/doc -guide.tex [2]) [3] [73] [4]) +guide.tex [2]) [3] [61] [4] (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/cur -rentdev.tex [74] [5]) [6] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/linearP -DE.tex +rentdev.tex [5 [62]]) [6] (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/coo kbook.toc [7]) [8] -Chapter 4. -[75 Chapter 1. (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/int -ro.tex] [9] +ro.tex [63] [9Install file: "dudley/src/Assemble.h" as "debian/stage3/include/dudley/Assemble.h" +Install file: "dudley/src/IndexList.h" as "debian/stage3/include/dudley/IndexList.h" +]Install file: "escriptcore/src/DataFactory.h" as "debian/stage3/include/escript/DataFactory.h" + (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/qui -ckstart.tex [76)] +ckstart.texInstall file: "escriptcore/src/Random.h" as "debian/stage3/include/escript/Random.h" +)Install file: "escriptcore/src/SolverOptions.h" as "debian/stage3/include/escript/SolverOptions.h" + (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/esc -pybas.tex (/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1ptm.fd))g++ -o debian/tmp3/posix/dudley/src/ElementFile_jacobians.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/ElementFile_jacobians.cpp -) [10] +pybas.texInstall file: "paso/src/Transport.h" as "debian/stage3/include/paso/Transport.h" + (/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1ptm.fd))) [10] Chapter 2. (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/exa -mple01.tex -Overfull \hbox (18.97215pt too wide) in paragraph at lines 180--182 -\OT1/ptm/m/n/10 Typically, a neg-a-tive value for a di-ag-nos-tic vari-able in- -di-cates that it is un-de-fined. For more de-tails on \OT1/pcr/m/n/10 SolverOpt -ions -[77] [78] +mple01.tex [64] +(/usr/share/texlive/texmf-dist/tex/latex/psnfss/omspcr.fd) Underfull \vbox (badness 2698) has occurred while \output is active [11pdfTeX w arning (ext4): destination with the same identifier (name{figure.2.1}) has been already used, duplicate ignored @@ -12711,48 +12697,61 @@ l.47 \end{equation} ] [79] [12] +six/doc/cookbook/figures/onedheatdiff001.pdf>]g++ -o debian/tmp3/posix/dudley/src/DudleyDomain.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/DudleyDomain.cpp + [12] [65] Underfull \hbox (badness 4353) in paragraph at lines 185--185 [][]\OT1/ptm/m/n/8 More in-for-ma-tion on Bound-ary Con-di-tions is avail-able at Wikipedia [][]$\OT1/pcr/m/n/8 http : / / en . wikipedia . org / wiki / Bound ary _ -[13 [80]] [81] [14pdfTeX warning (ext4): destination with the same identifier (name{figur +[13] +Overfull \hbox (30.76083pt too wide) in paragraph at lines 1718--1719 +[][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][ +][][][][][][][][][][][][][][][][][][][][][][][][][][][][] +[66] [14pdfTeX warning (ext4): destination with the same identifier (name{figur e.2.2}) has been already used, duplicate ignored ...shipout:D \box_use:N \l_shipout_box l.313 T here are various ways to construct domain objects. The simplest form ... ] [15pdfTeX warning (ext4): destination with the same identi +gures/workflow.png +Overfull \hbox (10.1535pt too wide) in paragraph at lines 1742--1743 +\OT1/pcr/m/n/10 Data \OT1/ptm/m/n/10 ob-jects can be con-verted into a numpy st +ruc-tured ar-ray us-ing the com-mands \OT1/pcr/m/n/10 getNumpy \OT1/ptm/m/n/10 +and \OT1/pcr/m/n/10 convertNumpy\OT1/ptm/m/n/10 . +[67]>] [15pdfTeX warning (ext4): destination with the same identi fier (name{figure.2.3}) has been already used, duplicate ignored ...shipout:D \box_use:N \l_shipout_box l.313 T here are various ways to construct domain objects. The simplest form ... ]] [16] [86] -(/usr/share/texlive/texmf-dist/tex/latex/listings/lstlang1.sty -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/lumping -.tex [87]) [88 ] [16] +(/usr/share/texlive/texmf-dist/tex/latex/listings/lstlang1.sty [68] [69)] [70] [71] Underfull \hbox (badness 10000) in paragraph at lines 415--425 -[17]>] [89 ...shipout:D \box_use:N \l_shipout_box l.680 \clearpage ]> ] +Overfull \hbox (18.97215pt too wide) in paragraph at lines 180--182 +\OT1/ptm/m/n/10 Typically, a neg-a-tive value for a di-ag-nos-tic vari-able in- +di-cates that it is un-de-fined. For more de-tails on \OT1/pcr/m/n/10 SolverOpt +ions +[77] [78] [79] Underfull \hbox (badness 10000) in paragraph at lines 684--692 @@ -12764,19 +12763,21 @@ l.776 \clearpage ]> ]> ]>] [89 Overfull \hbox (3.76056pt too wide) in paragraph at lines 797--798 [][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][ ][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][] [][][][][][][][][][][][][][][][][][][][][][][][][] ) (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/exa -mple02.tex +mple02.tex ])) -[91 ] +on-escript-5.6/debian/tmp3/posix/doc/cookbook/figures/ttrodpyplot150.png> ] [26pdfTeX warning (ext4): destination with the same identifier (name{figure.2.8 }) has been already used, duplicate ignored ...shipout:D \box_use:N \l_shipout_box l.108 \chapter {Heat Diffusion in Two Dimensions} ]g++ -o debian/tmp3/posix/dudley/src/ElementFile.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/ElementFile.cpp + [90> ] [92 ] +dpyplot050.png ] Chapter 3. (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/exa @@ -12822,51 +12822,43 @@ Underfull \hbox (badness 10000) in paragraph at lines 22--23 -[27] [28g++ -o debian/tmp3/posix/dudley/src/Mesh_getPattern.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/Mesh_getPattern.cpp -pdfTeX warning (ext4): destination with the same identifier (name{figur +[27] [28pdfTeX warning (ext4): destination with the same identifier (name{figur e.3.1}) has been already used, duplicate ignored ...shipout:D \box_use:N \l_shipout_box l.141 \begin{python} ]>] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/pycad.t -ex +osix/doc/cookbook/figures/twodheatdiff.pdf>]>])) +[91 LaTeX Warning: Float too large for page by 12.55325pt on input line 232. -[29] -Chapter 5. -[93] (/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1pcr.fd) +[29 ]) [31] [32pdfTeX warning (ext4): destination with the same identifier (name +[30]) [31] [32pdfTeX warning (ext4): destination with the same identifier (name {figure.3.2}) has been already used, duplicate ignored ...shipout:D \box_use:N \l_shipout_box l.112 \chapter {Complex Geometries} ] [97 ]> ] [99] [100] [101] [102] [103] [104])> ] [112 [33]pdfTeX warning (ext4): destination +ion030.png>] [92 ] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/pycad.t +ex +Chapter 5. +[93] [94]>] [33pdfTeX warning (ext4): destination with the same identifier (name{figure.3.3}) has been already used, duplicate ig nored ...shipout:D \box_use:N \l_shipout_box @@ -12878,43 +12870,57 @@ l.112 \chapter {Complex Geometries} ]) [115] [116] [117] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/faultsy -stem.tex> ]g++ -o debian/tmp3/posix/dudley/src/ElementFile_jacobians.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/ElementFile_jacobians.cpp + [96 ] [97 ]> ] [119] [120]>] [34] +ayavi2n2.png [98 ] [99] [100] [101]>] [34] Chapter 4. (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/exa -mple04.tex [121])) [122] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/finley. -tex +mple04.tex [102] [103] [104]) [105] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/Models. +tex [106] +Chapter 6. + +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/stokess +olver.tex Underfull \hbox (badness 10000) in paragraph at lines 37--41 -[35 -Chapter 7. -[123]] -Underfull \vbox (badness 1226) has occurred while \output is active [124 ] [125 ] [126] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/finleye -lements.tex [36pdfTeX warning (ext4): destination with the same identifier (name{figur +[35] [107] [108] [109] [110] [36pdfTeX warning (ext4): destination with the same identifier (name{figur e.4.1}) has been already used, duplicate ignored ...shipout:D \box_use:N \l_shipout_box l.139 \begin{python} ]) [127] [128] [37] [38pdfTeX warning (ext4): destina +osix/doc/cookbook/figures/pycadrec.pdf [111>]]) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/darcyfl +ux.tex [112] [113] [37] [38pdfTeX warning (ext4): destina tion with the same identifier (name{figure.4.2}) has been already used, duplica te ignored ...shipout:D \box_use:N \l_shipout_box l.194 \clearpage ]) [115] [116] [117] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/faultsy +stem.tex [118 ] [119] [120] [121])) [122] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/finley. +tex +Chapter 7. +[123] +Underfull \vbox (badness 1226) has occurred while \output is active [124 ] [125 ] [126] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/finleye +lements.tex) [127] [128]>] Underfull \hbox (badness 1910) in paragraph at lines 383--383 []\OT1/ptm/m/n/10 Table 7.2: Solvers avail-able for [] and the \OT1/pcr/m/n/10 PASO [][]\OT1/ptm/m/n/10 pack-age and the rel-e-vant op-tions in @@ -12923,9 +12929,29 @@ d/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/figures//Finl eyMacroLeg.pdf> ] [130]) [131] +5.6/debian/tmp3/posix/doc/user/figures//FinleyMacroRec.pdf>] +Underfull \hbox (badness 10000) in paragraph at lines 197--202 + +[39] [40pdfTeX warning (ext4): destination with the same identifier (name{figur +e.4.3}) has been already used, duplicate ignored + ...shipout:D \box_use:N \l_shipout_box + +l.276 \clearpage + ]) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/exa +mple05.tex +Underfull \hbox (badness 10000) in paragraph at lines 18--25 + +[41pdfTeX warning (ext4): destination with the same identifier (name{figure.4.4 +}) has been already used, duplicate ignored + ...shipout:D \box_use:N \l_shipout_box + +l.74 l30= + Line(p3, p0) ]) [135] @@ -12940,7 +12966,19 @@ (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/weipa.t ex Chapter 10. -[139] [140] [141]) [142]In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, +[139] [140] [141]) [142] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/trilino +s.tex +Chapter 11. +[143]g++ -o debian/tmp3/posix/dudley/src/IndexList.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/IndexList.cpp + [144] [145] [146] [147] +Underfull \hbox (badness 10000) in paragraph at lines 266--271 + + +Overfull \hbox (0.87425pt too wide) in paragraph at lines 278--279 +[]\OT1/pcr/m/n/10 "Elasticity-2D" and "Elasticity-3D"\OT1/ptm/m/n/10 : us-ing s +moothed ag-gre-ga-tion, Cheby-shev smoother and +[148]In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, @@ -12957,48 +12995,16 @@ from debian/stage3/include/escript/DataVector.h:24, from debian/stage3/include/escript/DataAbstract.h:23, from debian/stage3/include/escript/Data.h:24, - from debian/stage3/include/dudley/Dudley.h:31, - from debian/stage3/include/dudley/DudleyDomain.h:51, - from debian/stage3/include/dudley/DomainFactory.h:21, - from dudley/src/DomainFactory.cpp:18: + from dudley/src/Dudley.h:31, + from dudley/src/Assemble.h:27, + from dudley/src/Assemble_LumpedSystem.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ - -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/trilino -s.tex/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' +/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ - -Chapter 11. -[143] [144] [145]>] [146] [147] -Underfull \hbox (badness 10000) in paragraph at lines 197--202 - -[39] [40pdfTeX warning (ext4): destination with the same identifier (name{figur -e.4.3}) has been already used, duplicate ignored - ...shipout:D \box_use:N \l_shipout_box - -l.276 \clearpage - ]) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/exa -mple05.tex [149] -Underfull \hbox (badness 10000) in paragraph at lines 18--25 - -[41pdfTeX warning (ext4): destination with the same identifier (name{figure.4.4 -}) has been already used, duplicate ignored - ...shipout:D \box_use:N \l_shipout_box - -l.74 l30= - Line(p3, p0) + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' - 36 | BOOST_PRAGMA_MESSAGE( - | ^~~~~~~~~~~~~~~~~~~~ -) +c.aux) (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/subworl ds.aux) (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/appendi @@ -13129,37 +13113,11 @@ re/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmmi7.pfb> instead.' - 13 | BOOST_HEADER_DEPRECATED("") - | ^~~~~~~~~~~~~~~~~~~~~~~ -> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' - 36 | BOOST_PRAGMA_MESSAGE( - | ^~~~~~~~~~~~~~~~~~~~ -> instead.' - 13 | BOOST_HEADER_DEPRECATED("") - | ^~~~~~~~~~~~~~~~~~~~~~~ -> -Output written on user.pdf (184 pages, 2642719 bytes). +Output written on user.pdf (184 pages, 2642788 bytes). Transcript written on user.log. Install file: "debian/tmp3/posix/doc/user/user.pdf" as "debian/stage3/release/doc/user/user.pdf" -g++ -o debian/tmp3/posix/dudley/src/Mesh_optimizeDOFDistribution.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/Mesh_optimizeDOFDistribution.cpp +g++ -o debian/tmp3/posix/dudley/src/Mesh_getPattern.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/Mesh_getPattern.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -13207,25 +13162,53 @@ from debian/stage3/include/escript/Data.h:24, from dudley/src/Dudley.h:31, from dudley/src/ElementFile.h:21, - from dudley/src/ElementFile_createColoring.cpp:18: + from dudley/src/ElementFile.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ ->] +>]g++ -o debian/tmp3/posix/dudley/src/Mesh_optimizeDOFDistribution.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/Mesh_optimizeDOFDistribution.cpp + Overfull \hbox (24.65349pt too wide) in paragraph at lines 85--88 \OT1/ptm/m/n/10 This re-verse spline op-tion un-for-tu-nately does not work for the [][]\OT1/pcr/m/n/10 getLoopCoords []\OT1/ptm/m/n/10 com-mand, how-ever, th e [] -[42] [43pdfTeX warning (ext4): destination with the same identifier (name{figur +[42In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, + from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, + from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, + from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, + from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, + from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, + from /usr/include/boost/shared_ptr.hpp:17, + from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12, + from /usr/include/boost/python/converter/arg_to_python.hpp:15, + from /usr/include/boost/python/call.hpp:15, + from /usr/include/boost/python/object_core.hpp:14, + from /usr/include/boost/python/extract.hpp:16, + from debian/stage3/include/escript/WrappedArray.h:25, + from debian/stage3/include/escript/DataVectorAlt.h:26, + from debian/stage3/include/escript/DataVector.h:24, + from debian/stage3/include/escript/DataAbstract.h:23, + from debian/stage3/include/escript/Data.h:24, + from debian/stage3/include/dudley/Dudley.h:31, + from debian/stage3/include/dudley/DudleyDomain.h:51, + from debian/stage3/include/dudley/DomainFactory.h:21, + from dudley/src/DomainFactory.cpp:18: +/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' + 36 | BOOST_PRAGMA_MESSAGE( + | ^~~~~~~~~~~~~~~~~~~~ +] [43pdfTeX warning (ext4): destination with the same identifier (name{figur e.4.5}) has been already used, duplicate ignored ...shipout:D \box_use:N \l_shipout_box l.134 \clearpage ] +/doc/cookbook/figures/heatrefraction.png/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' + 13 | BOOST_HEADER_DEPRECATED("") + | ^~~~~~~~~~~~~~~~~~~~~~~ +>] Underfull \hbox (badness 10000) in paragraph at lines 137--142 [44] [45pdfTeX warning (ext4): destination with the same identifier (name{figur @@ -13234,10 +13217,7 @@ l.199 \clearpage + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ -> instead.' +/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ ->] +> ] Underfull \hbox (badness 10000) in paragraph at lines 202--209 @@ -13286,11 +13269,7 @@ l.305 \clearpage ]) -Chapter 5. - -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/exa -mple07.texIn file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, +/doc/cookbook/figures/heatrefraction2flux.pngIn file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, @@ -13308,33 +13287,15 @@ from debian/stage3/include/escript/DataAbstract.h:23, from debian/stage3/include/escript/Data.h:24, from dudley/src/Dudley.h:31, - from dudley/src/IndexList.h:27, - from dudley/src/IndexList.cpp:24: + from dudley/src/ElementFile.h:21, + from dudley/src/ElementFile_jacobians.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ - [49]/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' +/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ - -Underfull \hbox (badness 10000) in paragraph at lines 154--155 - - -Underfull \hbox (badness 10000) in paragraph at lines 154--155 - -[50] [51] -Underfull \hbox (badness 10000) in paragraph at lines 279--280 - - -Underfull \hbox (badness 10000) in paragraph at lines 279--280 - -[52pdfTeX warning (ext4): destination with the same identifier (name{figure.5.1 -}) has been already used, duplicate ignored - ...shipout:D \box_use:N \l_shipout_box - -l.280 - + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ ->]/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' +/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ - [53])In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, +>]) +Chapter 5. + +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/exa +mple07.tex [49] +Underfull \hbox (badness 10000) in paragraph at lines 154--155 + + +Underfull \hbox (badness 10000) in paragraph at lines 154--155 + +[50] [51] +Underfull \hbox (badness 10000) in paragraph at lines 279--280 + + +Underfull \hbox (badness 10000) in paragraph at lines 279--280 + +[52pdfTeX warning (ext4): destination with the same identifier (name{figure.5.1 +}) has been already used, duplicate ignored + ...shipout:D \box_use:N \l_shipout_box + +l.280 + + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ - [54pdfTeX warning (ext4): destination with t +g++ -o debian/tmp3/posix/dudley/src/Mesh_optimizeDOFLabeling.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/Mesh_optimizeDOFLabeling.cpp +/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' + 13 | BOOST_HEADER_DEPRECATED("") + | ^~~~~~~~~~~~~~~~~~~~~~~ +>] [53]) [54pdfTeX warning (ext4): destination with t he same identifier (name{figure.5.2}) has been already used, duplicate ignored ...shipout:D \box_use:N \l_shipout_box @@ -13396,10 +13383,7 @@ Chapter 6. (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/exa -mple08.tex/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' - 13 | BOOST_HEADER_DEPRECATED("") - | ^~~~~~~~~~~~~~~~~~~~~~~ - +mple08.tex Underfull \hbox (badness 10000) in paragraph at lines 18--24 [55] @@ -13430,8 +13414,7 @@ l.273 t= t+h; n=n+1 ] [60] [61pdfTeX warning (ext4): destination +ix/doc/cookbook/figures/source.png>] [60] [61pdfTeX warning (ext4): destination with the same identifier (name{figure.6.3}) has been already used, duplicate i gnored ...shipout:D \box_use:N \l_shipout_box @@ -13476,8 +13459,7 @@ ix/doc/cookbook/figures/gmsh-example09m.png (PNG copy)> ]g++ -o debian/tmp3/posix/dudley/src/Mesh_read.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/Mesh_read.cpp - [69pdfTeX warning ( +x/doc/cookbook/figures/gmsh-example09msh3d.png (PNG copy)>] [69pdfTeX warning ( ext4): destination with the same identifier (name{figure.7.1}) has been already used, duplicate ignored ...shipout:D \box_use:N \l_shipout_box @@ -13499,30 +13481,7 @@ Chapter 8. (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/exa -mple10.tex [73] [74]In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, - from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, - from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, - from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, - from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, - from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, - from /usr/include/boost/shared_ptr.hpp:17, - from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12, - from /usr/include/boost/python/converter/arg_to_python.hpp:15, - from /usr/include/boost/python/call.hpp:15, - from /usr/include/boost/python/object_core.hpp:14, - from /usr/include/boost/python/extract.hpp:16, - from debian/stage3/include/escript/WrappedArray.h:25, - from debian/stage3/include/escript/DataVectorAlt.h:26, - from debian/stage3/include/escript/DataVector.h:24, - from debian/stage3/include/escript/DataAbstract.h:23, - from debian/stage3/include/escript/Data.h:24, - from debian/stage3/include/dudley/Dudley.h:31, - from dudley/src/DudleyDomain.h:51, - from dudley/src/Mesh_getPattern.cpp:18: -/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' - 36 | BOOST_PRAGMA_MESSAGE( - | ^~~~~~~~~~~~~~~~~~~~ - +mple10.tex [73] [74] Underfull \hbox (badness 10000) in paragraph at lines 93--97 [75] [76pdfTeX warning (ext4): destination with the same identifier (name{figur @@ -13536,10 +13495,7 @@ l.177 \clearpage instead.' - 13 | BOOST_HEADER_DEPRECATED("") - | ^~~~~~~~~~~~~~~~~~~~~~~ -> ] [77pdfTeX w arning (ext4): destination with the same identifier (name{figure.8.3}) has been already used, duplicate ignored @@ -13553,7 +13509,8 @@ l.177 \clearpage ] +escript-5.6/debian/tmp3/posix/doc/cookbook/figures/ex10apot.png (PNG copy)>]g++ -o debian/tmp3/posix/dudley/src/Mesh_read.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/Mesh_read.cpp + Underfull \hbox (badness 10000) in paragraph at lines 180--184 [78] [79pdfTeX warning (ext4): destination with the same identifier (name{figur @@ -13578,7 +13535,33 @@ /doc/cookbook/figures/ex10p_boundeff.pdf>] Underfull \hbox (badness 10000) in paragraph at lines 275--281 -[81] [82] [83pdfTeX warning (ext4): destination with the same identifier (name{ +[81]In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, + from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, + from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, + from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, + from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, + from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, + from /usr/include/boost/shared_ptr.hpp:17, + from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12, + from /usr/include/boost/python/converter/arg_to_python.hpp:15, + from /usr/include/boost/python/call.hpp:15, + from /usr/include/boost/python/object_core.hpp:14, + from /usr/include/boost/python/extract.hpp:16, + from debian/stage3/include/escript/WrappedArray.h:25, + from debian/stage3/include/escript/DataVectorAlt.h:26, + from debian/stage3/include/escript/DataVector.h:24, + from debian/stage3/include/escript/DataAbstract.h:23, + from debian/stage3/include/escript/Data.h:24, + from dudley/src/Dudley.h:31, + from dudley/src/IndexList.h:27, + from dudley/src/IndexList.cpp:24: +/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' + 36 | BOOST_PRAGMA_MESSAGE( + | ^~~~~~~~~~~~~~~~~~~~ +/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' + 13 | BOOST_HEADER_DEPRECATED("") + | ^~~~~~~~~~~~~~~~~~~~~~~ + [82] [83pdfTeX warning (ext4): destination with the same identifier (name{ figure.8.8}) has been already used, duplicate ignored ...shipout:D \box_use:N \l_shipout_box @@ -13765,15 +13748,13 @@ /fonts/type1/urw/times/utmb8a.pfb> -Output written on cookbook.pdf (89 pages, 4392329 bytes). +Output written on cookbook.pdf (89 pages, 4392462 bytes). Transcript written on cookbook.log. Install file: "debian/tmp3/posix/doc/cookbook/cookbook.pdf" as "debian/stage3/release/doc/cookbook/cookbook.pdf" g++ -o debian/tmp3/posix/dudley/src/Mesh_readGmsh.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/Mesh_readGmsh.cpp g++ -o debian/tmp3/posix/dudley/src/Mesh_resolveNodeIds.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/Mesh_resolveNodeIds.cpp g++ -o debian/tmp3/posix/dudley/src/Mesh_tet4.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/Mesh_tet4.cpp g++ -o debian/tmp3/posix/dudley/src/Mesh_tri3.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/Mesh_tri3.cpp -g++ -o debian/tmp3/posix/dudley/src/Mesh_write.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/Mesh_write.cpp -g++ -o debian/tmp3/posix/dudley/src/NodeFile.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/NodeFile.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -13793,14 +13774,13 @@ from debian/stage3/include/escript/Data.h:24, from debian/stage3/include/dudley/Dudley.h:31, from dudley/src/DudleyDomain.h:51, - from dudley/src/Mesh_optimizeDOFDistribution.cpp:18: + from dudley/src/Mesh_distributeByRankOfDOF.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/dudley/src/NodeFile_createDenseLabelings.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/NodeFile_createDenseLabelings.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -13820,7 +13800,7 @@ from debian/stage3/include/escript/Data.h:24, from debian/stage3/include/dudley/Dudley.h:31, from dudley/src/DudleyDomain.h:51, - from dudley/src/Mesh_optimizeDOFLabeling.cpp:18: + from dudley/src/Mesh_optimizeDOFDistribution.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ @@ -13846,14 +13826,14 @@ from debian/stage3/include/escript/Data.h:24, from debian/stage3/include/dudley/Dudley.h:31, from dudley/src/DudleyDomain.h:51, - from dudley/src/Mesh_read.cpp:18: + from dudley/src/Mesh_getPattern.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/dudley/src/NodeFile_createMappings.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/NodeFile_createMappings.cpp +g++ -o debian/tmp3/posix/dudley/src/Mesh_write.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/Mesh_write.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -13873,13 +13853,15 @@ from debian/stage3/include/escript/Data.h:24, from debian/stage3/include/dudley/Dudley.h:31, from dudley/src/DudleyDomain.h:51, - from dudley/src/Mesh_resolveNodeIds.cpp:18: + from dudley/src/Mesh_optimizeDOFLabeling.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/dudley/src/NodeFile.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/NodeFile.cpp +g++ -o debian/tmp3/posix/dudley/src/NodeFile_createDenseLabelings.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/NodeFile_createDenseLabelings.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -13899,16 +13881,13 @@ from debian/stage3/include/escript/Data.h:24, from debian/stage3/include/dudley/Dudley.h:31, from dudley/src/DudleyDomain.h:51, - from dudley/src/Mesh_tet4.cpp:18: + from dudley/src/Mesh_readGmsh.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/dudley/src/NodeFile_createTrilinosGraph.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/NodeFile_createTrilinosGraph.cpp -g++ -o debian/tmp3/posix/dudley/src/NodeFile_gather.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/NodeFile_gather.cpp -g++ -o debian/tmp3/posix/dudley/src/ShapeTable.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/ShapeTable.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -13928,13 +13907,14 @@ from debian/stage3/include/escript/Data.h:24, from debian/stage3/include/dudley/Dudley.h:31, from dudley/src/DudleyDomain.h:51, - from dudley/src/Mesh_tri3.cpp:18: + from dudley/src/Mesh_read.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/dudley/src/NodeFile_createMappings.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/NodeFile_createMappings.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -13952,15 +13932,18 @@ from debian/stage3/include/escript/DataVector.h:24, from debian/stage3/include/escript/DataAbstract.h:23, from debian/stage3/include/escript/Data.h:24, - from dudley/src/Dudley.h:31, - from dudley/src/NodeFile.h:21, - from dudley/src/NodeFile.cpp:18: + from debian/stage3/include/dudley/Dudley.h:31, + from dudley/src/DudleyDomain.h:51, + from dudley/src/Mesh_resolveNodeIds.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/dudley/src/NodeFile_createTrilinosGraph.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/NodeFile_createTrilinosGraph.cpp +g++ -o debian/tmp3/posix/dudley/src/NodeFile_gather.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/NodeFile_gather.cpp +g++ -o debian/tmp3/posix/dudley/src/ShapeTable.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/ShapeTable.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -13978,15 +13961,12 @@ from debian/stage3/include/escript/DataVector.h:24, from debian/stage3/include/escript/DataAbstract.h:23, from debian/stage3/include/escript/Data.h:24, - from dudley/src/Dudley.h:31, - from dudley/src/NodeFile.h:21, - from dudley/src/NodeFile_createDenseLabelings.cpp:18: + from debian/stage3/include/dudley/Dudley.h:31, + from dudley/src/DudleyDomain.h:51, + from dudley/src/Mesh_tet4.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ -/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' - 13 | BOOST_HEADER_DEPRECATED("") - | ^~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -14006,13 +13986,16 @@ from debian/stage3/include/escript/Data.h:24, from debian/stage3/include/dudley/Dudley.h:31, from dudley/src/DudleyDomain.h:51, - from dudley/src/Mesh_readGmsh.cpp:18: + from dudley/src/Mesh_tri3.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' + 13 | BOOST_HEADER_DEPRECATED("") + | ^~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -14040,7 +14023,6 @@ 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ g++ -o debian/tmp3/posix/dudley/src/Util.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/Util.cpp -g++ -o debian/tmp3/posix/dudley/src/Assemble_gradient.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -funroll-loops -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/Assemble_gradient.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -14060,17 +14042,42 @@ from debian/stage3/include/escript/Data.h:24, from dudley/src/Dudley.h:31, from dudley/src/NodeFile.h:21, - from dudley/src/NodeFile_createMappings.cpp:25: + from dudley/src/NodeFile_createDenseLabelings.cpp:18: +/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' + 36 | BOOST_PRAGMA_MESSAGE( + | ^~~~~~~~~~~~~~~~~~~~ +/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' + 13 | BOOST_HEADER_DEPRECATED("") + | ^~~~~~~~~~~~~~~~~~~~~~~ +In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, + from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, + from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, + from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, + from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, + from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, + from /usr/include/boost/shared_ptr.hpp:17, + from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12, + from /usr/include/boost/python/converter/arg_to_python.hpp:15, + from /usr/include/boost/python/call.hpp:15, + from /usr/include/boost/python/object_core.hpp:14, + from /usr/include/boost/python/extract.hpp:16, + from debian/stage3/include/escript/WrappedArray.h:25, + from debian/stage3/include/escript/DataVectorAlt.h:26, + from debian/stage3/include/escript/DataVector.h:24, + from debian/stage3/include/escript/DataAbstract.h:23, + from debian/stage3/include/escript/Data.h:24, + from dudley/src/Dudley.h:31, + from dudley/src/NodeFile.h:21, + from dudley/src/NodeFile.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/dudley/src/Assemble_gradient.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -funroll-loops -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/Assemble_gradient.cpp g++ -o debian/tmp3/posix/dudley/src/Assemble_jacobians.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -funroll-loops -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/Assemble_jacobians.cpp g++ -o debian/tmp3/posix/paso/src/BiCGStab.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/BiCGStab.cpp -g++ -o debian/tmp3/posix/paso/src/Coupler.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/Coupler.cpp -g++ -o debian/tmp3/posix/paso/src/FCT_Solver.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/FCT_Solver.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -14090,14 +14097,13 @@ from debian/stage3/include/escript/Data.h:24, from dudley/src/Dudley.h:31, from dudley/src/NodeFile.h:21, - from dudley/src/NodeFile_gather.cpp:18: + from dudley/src/NodeFile_createMappings.cpp:25: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/paso/src/FluxLimiter.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/FluxLimiter.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -14124,7 +14130,39 @@ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, + from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, + from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, + from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, + from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, + from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, + from /usr/include/boost/shared_ptr.hpp:17, + from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12, + from /usr/include/boost/python/converter/arg_to_python.hpp:15, + from /usr/include/boost/python/call.hpp:15, + from /usr/include/boost/python/object_core.hpp:14, + from /usr/include/boost/python/extract.hpp:16, + from debian/stage3/include/escript/WrappedArray.h:25, + from debian/stage3/include/escript/DataVectorAlt.h:26, + from debian/stage3/include/escript/DataVector.h:24, + from debian/stage3/include/escript/DataAbstract.h:23, + from debian/stage3/include/escript/Data.h:24, + from dudley/src/Dudley.h:31, + from dudley/src/NodeFile.h:21, + from dudley/src/NodeFile_gather.cpp:18: +/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' + 36 | BOOST_PRAGMA_MESSAGE( + | ^~~~~~~~~~~~~~~~~~~~ +/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' + 13 | BOOST_HEADER_DEPRECATED("") + | ^~~~~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/paso/src/Coupler.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/Coupler.cpp +g++ -o debian/tmp3/posix/paso/src/FCT_Solver.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/FCT_Solver.cpp +g++ -o debian/tmp3/posix/paso/src/FluxLimiter.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/FluxLimiter.cpp g++ -o debian/tmp3/posix/paso/src/Functions.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/Functions.cpp +g++ -o debian/tmp3/posix/paso/src/GMRES.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/GMRES.cpp +g++ -o debian/tmp3/posix/paso/src/GMRES2.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/GMRES2.cpp +g++ -o debian/tmp3/posix/paso/src/MKL.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/MKL.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -14151,7 +14189,8 @@ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/paso/src/GMRES.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/GMRES.cpp +g++ -o debian/tmp3/posix/paso/src/MUMPS.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/MUMPS.cpp +g++ -o debian/tmp3/posix/paso/src/NewtonGMRES.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/NewtonGMRES.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -14204,9 +14243,6 @@ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/paso/src/GMRES2.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/GMRES2.cpp -g++ -o debian/tmp3/posix/paso/src/MKL.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/MKL.cpp -g++ -o debian/tmp3/posix/paso/src/MUMPS.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/MUMPS.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -14242,7 +14278,8 @@ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/paso/src/NewtonGMRES.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/NewtonGMRES.cpp +g++ -o debian/tmp3/posix/paso/src/Options.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/Options.cpp +g++ -o debian/tmp3/posix/paso/src/PCG.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/PCG.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -14252,17 +14289,15 @@ from /usr/include/boost/shared_ptr.hpp:17, from debian/stage3/include/escript/EsysMPI.h:28, from paso/src/Paso.h:36, - from paso/src/Transport.h:24, - from paso/src/FluxLimiter.h:21, - from paso/src/FluxLimiter.cpp:28: + from paso/src/Functions.h:22, + from paso/src/Functions.cpp:17: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/paso/src/Options.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/Options.cpp -g++ -o debian/tmp3/posix/paso/src/PCG.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/PCG.cpp +g++ -o debian/tmp3/posix/paso/src/PasoUtil.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/PasoUtil.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -14272,15 +14307,16 @@ from /usr/include/boost/shared_ptr.hpp:17, from debian/stage3/include/escript/EsysMPI.h:28, from paso/src/Paso.h:36, - from paso/src/Functions.h:22, - from paso/src/Functions.cpp:17: + from paso/src/Transport.h:24, + from paso/src/FluxLimiter.h:21, + from paso/src/FluxLimiter.cpp:28: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/paso/src/PasoUtil.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/PasoUtil.cpp +g++ -o debian/tmp3/posix/paso/src/Pattern.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/Pattern.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -14298,9 +14334,7 @@ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/paso/src/Pattern.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/Pattern.cpp g++ -o debian/tmp3/posix/paso/src/Pattern_mis.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/Pattern_mis.cpp -g++ -o debian/tmp3/posix/paso/src/Pattern_reduceBandwidth.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/Pattern_reduceBandwidth.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -14318,10 +14352,9 @@ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/paso/src/Pattern_reduceBandwidth.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/Pattern_reduceBandwidth.cpp g++ -o debian/tmp3/posix/paso/src/Preconditioner.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/Preconditioner.cpp g++ -o debian/tmp3/posix/paso/src/ReactiveSolver.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/ReactiveSolver.cpp -g++ -o debian/tmp3/posix/paso/src/SchurComplement.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/SchurComplement.cpp -g++ -o debian/tmp3/posix/paso/src/Smoother.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/Smoother.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -14338,10 +14371,13 @@ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/paso/src/SchurComplement.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/SchurComplement.cpp +g++ -o debian/tmp3/posix/paso/src/Smoother.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/Smoother.cpp g++ -o debian/tmp3/posix/paso/src/Solver.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/Solver.cpp g++ -o debian/tmp3/posix/paso/src/Solver_Function.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/Solver_Function.cpp g++ -o debian/tmp3/posix/paso/src/SparseMatrix.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/SparseMatrix.cpp g++ -o debian/tmp3/posix/paso/src/SparseMatrix_getSubmatrix.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/SparseMatrix_getSubmatrix.cpp +g++ -o debian/tmp3/posix/paso/src/SparseMatrix_nullifyRowsAndCols.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/SparseMatrix_nullifyRowsAndCols.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -14359,11 +14395,8 @@ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/paso/src/SparseMatrix_nullifyRowsAndCols.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/SparseMatrix_nullifyRowsAndCols.cpp g++ -o debian/tmp3/posix/paso/src/SparseMatrix_saveHB.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/SparseMatrix_saveHB.cpp g++ -o debian/tmp3/posix/paso/src/SparseMatrix_MatrixMatrix.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/SparseMatrix_MatrixMatrix.cpp -g++ -o debian/tmp3/posix/paso/src/SparseMatrix_MatrixMatrixTranspose.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/SparseMatrix_MatrixMatrixTranspose.cpp -g++ -o debian/tmp3/posix/paso/src/SparseMatrix_MatrixVector.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/SparseMatrix_MatrixVector.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -14373,7 +14406,8 @@ from /usr/include/boost/shared_ptr.hpp:17, from debian/stage3/include/escript/EsysMPI.h:28, from paso/src/Paso.h:36, - from paso/src/SchurComplement.cpp:21: + from paso/src/Preconditioner.h:21, + from paso/src/Preconditioner.cpp:28: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ @@ -14389,8 +14423,7 @@ from /usr/include/boost/shared_ptr.hpp:17, from debian/stage3/include/escript/EsysMPI.h:28, from paso/src/Paso.h:36, - from paso/src/Preconditioner.h:21, - from paso/src/Preconditioner.cpp:28: + from paso/src/SchurComplement.cpp:21: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ @@ -14412,9 +14445,11 @@ /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/paso/src/SparseMatrix_MatrixMatrixTranspose.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/SparseMatrix_MatrixMatrixTranspose.cpp /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/paso/src/SparseMatrix_MatrixVector.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/SparseMatrix_MatrixVector.cpp g++ -o debian/tmp3/posix/paso/src/SystemMatrix.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/SystemMatrix.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, @@ -14425,8 +14460,8 @@ from /usr/include/boost/shared_ptr.hpp:17, from debian/stage3/include/escript/EsysMPI.h:28, from paso/src/Paso.h:36, - from paso/src/Preconditioner.h:21, - from paso/src/Smoother.cpp:28: + from paso/src/Functions.h:22, + from paso/src/Solver_Function.cpp:17: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ @@ -14442,8 +14477,8 @@ from /usr/include/boost/shared_ptr.hpp:17, from debian/stage3/include/escript/EsysMPI.h:28, from paso/src/Paso.h:36, - from paso/src/Solver.h:22, - from paso/src/Solver.cpp:28: + from paso/src/Preconditioner.h:21, + from paso/src/Smoother.cpp:28: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ @@ -14459,9 +14494,8 @@ from /usr/include/boost/shared_ptr.hpp:17, from debian/stage3/include/escript/EsysMPI.h:28, from paso/src/Paso.h:36, - from paso/src/Pattern.h:32, - from paso/src/SparseMatrix.h:32, - from paso/src/SparseMatrix.cpp:28: + from paso/src/Solver.h:22, + from paso/src/Solver.cpp:28: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ @@ -14477,8 +14511,9 @@ from /usr/include/boost/shared_ptr.hpp:17, from debian/stage3/include/escript/EsysMPI.h:28, from paso/src/Paso.h:36, - from paso/src/Functions.h:22, - from paso/src/Solver_Function.cpp:17: + from paso/src/Pattern.h:32, + from paso/src/SparseMatrix.h:32, + from paso/src/SparseMatrix.cpp:28: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ @@ -14493,11 +14528,28 @@ g++ -o debian/tmp3/posix/paso/src/SystemMatrix_mergeMainAndCouple.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/SystemMatrix_mergeMainAndCouple.cpp g++ -o debian/tmp3/posix/paso/src/SystemMatrixPattern.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/SystemMatrixPattern.cpp g++ -o debian/tmp3/posix/paso/src/SystemMatrixPattern_unrollBlocks.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/SystemMatrixPattern_unrollBlocks.cpp +In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, + from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, + from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, + from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, + from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, + from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, + from /usr/include/boost/shared_ptr.hpp:17, + from debian/stage3/include/escript/EsysMPI.h:28, + from paso/src/Paso.h:36, + from paso/src/Pattern.h:32, + from paso/src/SparseMatrix.h:32, + from paso/src/SystemMatrix.h:33, + from paso/src/SystemMatrix.cpp:28: +/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' + 36 | BOOST_PRAGMA_MESSAGE( + | ^~~~~~~~~~~~~~~~~~~~ +/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' + 13 | BOOST_HEADER_DEPRECATED("") + | ^~~~~~~~~~~~~~~~~~~~~~~ g++ -o debian/tmp3/posix/paso/src/Transport.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/Transport.cpp g++ -o debian/tmp3/posix/paso/src/Transport_solve.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/Transport_solve.cpp g++ -o debian/tmp3/posix/paso/src/ILU.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/ILU.cpp -g++ -o debian/tmp3/posix/paso/src/MINRES.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/MINRES.cpp -g++ -o debian/tmp3/posix/paso/src/RILU.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/RILU.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -14517,6 +14569,7 @@ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/paso/src/MINRES.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/MINRES.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -14529,7 +14582,7 @@ from paso/src/Pattern.h:32, from paso/src/SparseMatrix.h:32, from paso/src/SystemMatrix.h:33, - from paso/src/SystemMatrix.cpp:28: + from paso/src/SystemMatrix_copyRemoteCoupleBlock.cpp:33: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ @@ -14548,7 +14601,7 @@ from paso/src/Pattern.h:32, from paso/src/SparseMatrix.h:32, from paso/src/SystemMatrix.h:33, - from paso/src/SystemMatrix_debug.cpp:28: + from paso/src/SystemMatrix_extendedRows.cpp:34: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ @@ -14567,7 +14620,7 @@ from paso/src/Pattern.h:32, from paso/src/SparseMatrix.h:32, from paso/src/SystemMatrix.h:33, - from paso/src/SystemMatrix_copyRemoteCoupleBlock.cpp:33: + from paso/src/SystemMatrix_debug.cpp:28: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ @@ -14593,6 +14646,10 @@ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/paso/src/RILU.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/RILU.cpp +g++ -o debian/tmp3/posix/paso/src/TFQMR.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/TFQMR.cpp +g++ -o debian/tmp3/posix/paso/src/UMFPACK.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/UMFPACK.cpp +g++ -o debian/tmp3/posix/paso/src/mmio.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/mmio.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -14602,10 +14659,8 @@ from /usr/include/boost/shared_ptr.hpp:17, from debian/stage3/include/escript/EsysMPI.h:28, from paso/src/Paso.h:36, - from paso/src/Pattern.h:32, - from paso/src/SparseMatrix.h:32, - from paso/src/SystemMatrix.h:33, - from paso/src/SystemMatrix_mergeMainAndCouple.cpp:36: + from paso/src/Transport.h:24, + from paso/src/Transport_solve.cpp:40: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ @@ -14624,13 +14679,15 @@ from paso/src/Pattern.h:32, from paso/src/SparseMatrix.h:32, from paso/src/SystemMatrix.h:33, - from paso/src/SystemMatrix_extendedRows.cpp:34: + from paso/src/SystemMatrix_mergeMainAndCouple.cpp:36: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/paso/src/performance.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/performance.cpp +g++ -o debian/tmp3/posix/paso/src/solve.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/solve.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -14648,7 +14705,8 @@ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/paso/src/TFQMR.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/TFQMR.cpp +g++ -o debian/tmp3/posix/escriptcore/src/AbstractContinuousDomain.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/AbstractContinuousDomain.cpp +g++ -o debian/tmp3/posix/escriptcore/src/AbstractDomain.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/AbstractDomain.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -14658,8 +14716,8 @@ from /usr/include/boost/shared_ptr.hpp:17, from debian/stage3/include/escript/EsysMPI.h:28, from paso/src/Paso.h:36, - from paso/src/Transport.h:24, - from paso/src/Transport_solve.cpp:40: + from paso/src/Solver.h:22, + from paso/src/MINRES.cpp:20: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ @@ -14675,13 +14733,14 @@ from /usr/include/boost/shared_ptr.hpp:17, from debian/stage3/include/escript/EsysMPI.h:28, from paso/src/Paso.h:36, - from paso/src/ILU.cpp:29: + from paso/src/RILU.cpp:28: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/escriptcore/src/AbstractReducer.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/AbstractReducer.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -14691,18 +14750,15 @@ from /usr/include/boost/shared_ptr.hpp:17, from debian/stage3/include/escript/EsysMPI.h:28, from paso/src/Paso.h:36, - from paso/src/Solver.h:22, - from paso/src/MINRES.cpp:20: + from paso/src/ILU.cpp:29: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/paso/src/UMFPACK.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/UMFPACK.cpp -g++ -o debian/tmp3/posix/paso/src/mmio.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/mmio.cpp -g++ -o debian/tmp3/posix/paso/src/performance.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/performance.cpp -g++ -o debian/tmp3/posix/paso/src/solve.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/solve.cpp +g++ -o debian/tmp3/posix/escriptcore/src/AbstractSystemMatrix.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/AbstractSystemMatrix.cpp +g++ -o debian/tmp3/posix/escriptcore/src/AbstractTransportProblem.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/AbstractTransportProblem.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -14712,20 +14768,15 @@ from /usr/include/boost/shared_ptr.hpp:17, from debian/stage3/include/escript/EsysMPI.h:28, from paso/src/Paso.h:36, - from paso/src/RILU.cpp:28: + from paso/src/Solver.h:22, + from paso/src/TFQMR.cpp:52: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/escriptcore/src/AbstractContinuousDomain.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/AbstractContinuousDomain.cpp /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/escriptcore/src/AbstractDomain.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/AbstractDomain.cpp -g++ -o debian/tmp3/posix/escriptcore/src/AbstractReducer.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/AbstractReducer.cpp -g++ -o debian/tmp3/posix/escriptcore/src/AbstractSystemMatrix.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/AbstractSystemMatrix.cpp -g++ -o debian/tmp3/posix/escriptcore/src/AbstractTransportProblem.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/AbstractTransportProblem.cpp g++ -o debian/tmp3/posix/escriptcore/src/ArrayOps.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/ArrayOps.cpp -g++ -o debian/tmp3/posix/escriptcore/src/BinaryDataReadyOps.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/BinaryDataReadyOps.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -14735,17 +14786,15 @@ from /usr/include/boost/shared_ptr.hpp:17, from debian/stage3/include/escript/EsysMPI.h:28, from paso/src/Paso.h:36, - from paso/src/Solver.h:22, - from paso/src/TFQMR.cpp:52: + from paso/src/solve.cpp:29: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/escriptcore/src/BinaryDataReadyOps.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/BinaryDataReadyOps.cpp g++ -o debian/tmp3/posix/escriptcore/src/Data.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/Data.cpp -g++ -o debian/tmp3/posix/escriptcore/src/DataAbstract.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/DataAbstract.cpp -g++ -o debian/tmp3/posix/escriptcore/src/DataConstant.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/DataConstant.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -14763,8 +14812,8 @@ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/escriptcore/src/DataEmpty.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/DataEmpty.cpp -g++ -o debian/tmp3/posix/escriptcore/src/DataExpanded.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/DataExpanded.cpp +g++ -o debian/tmp3/posix/escriptcore/src/DataAbstract.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/DataAbstract.cpp +g++ -o debian/tmp3/posix/escriptcore/src/DataConstant.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/DataConstant.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -14772,15 +14821,18 @@ from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, from /usr/include/boost/shared_ptr.hpp:17, - from debian/stage3/include/escript/EsysMPI.h:28, - from paso/src/Paso.h:36, - from paso/src/solve.cpp:29: + from escriptcore/src/EsysMPI.h:28, + from escriptcore/src/AbstractDomain.h:24, + from escriptcore/src/AbstractDomain.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/escriptcore/src/DataEmpty.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/DataEmpty.cpp +g++ -o debian/tmp3/posix/escriptcore/src/DataExpanded.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/DataExpanded.cpp +g++ -o debian/tmp3/posix/escriptcore/src/DataFactory.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/DataFactory.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -14806,19 +14858,7 @@ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, - from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, - from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, - from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, - from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, - from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, - from /usr/include/boost/shared_ptr.hpp:17, - from escriptcore/src/EsysMPI.h:28, - from escriptcore/src/AbstractDomain.h:24, - from escriptcore/src/AbstractDomain.cpp:18: -/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' - 36 | BOOST_PRAGMA_MESSAGE( - | ^~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/escriptcore/src/DataLazy.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/DataLazy.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -14837,9 +14877,6 @@ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' - 13 | BOOST_HEADER_DEPRECATED("") - | ^~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -14858,6 +14895,8 @@ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/escriptcore/src/DataReady.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/DataReady.cpp +g++ -o debian/tmp3/posix/escriptcore/src/DataTagged.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/DataTagged.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -14908,7 +14947,6 @@ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/escriptcore/src/DataFactory.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/DataFactory.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -14929,12 +14967,9 @@ /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/escriptcore/src/DataLazy.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/DataLazy.cpp /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/escriptcore/src/DataReady.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/DataReady.cpp -g++ -o debian/tmp3/posix/escriptcore/src/DataTagged.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/DataTagged.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -14952,16 +14987,14 @@ from escriptcore/src/DataVector.h:24, from escriptcore/src/DataAbstract.h:23, from escriptcore/src/DataReady.h:23, - from escriptcore/src/DataConstant.h:23, - from escriptcore/src/DataConstant.cpp:18: + from escriptcore/src/DataEmpty.h:22, + from escriptcore/src/DataEmpty.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/escriptcore/src/DataTypes.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/DataTypes.cpp -g++ -o debian/tmp3/posix/escriptcore/src/DataVector.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/DataVector.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -14979,8 +15012,8 @@ from escriptcore/src/DataVector.h:24, from escriptcore/src/DataAbstract.h:23, from escriptcore/src/DataReady.h:23, - from escriptcore/src/DataEmpty.h:22, - from escriptcore/src/DataEmpty.cpp:18: + from escriptcore/src/DataConstant.h:23, + from escriptcore/src/DataConstant.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ @@ -15011,8 +15044,9 @@ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/escriptcore/src/DataTypes.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/DataTypes.cpp +g++ -o debian/tmp3/posix/escriptcore/src/DataVector.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/DataVector.cpp g++ -o debian/tmp3/posix/escriptcore/src/DataVectorAlt.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/DataVectorAlt.cpp -g++ -o debian/tmp3/posix/escriptcore/src/DataVectorOps.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/DataVectorOps.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -15046,15 +15080,14 @@ from escriptcore/src/DataVectorAlt.h:26, from escriptcore/src/DataVector.h:24, from escriptcore/src/DataAbstract.h:23, - from escriptcore/src/Data.h:24, - from escriptcore/src/DataTagged.cpp:18: + from escriptcore/src/DataLazy.h:22, + from escriptcore/src/DataLazy.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/escriptcore/src/DataVectorTaipan.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/DataVectorTaipan.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -15071,14 +15104,15 @@ from escriptcore/src/DataVectorAlt.h:26, from escriptcore/src/DataVector.h:24, from escriptcore/src/DataAbstract.h:23, - from escriptcore/src/DataLazy.h:22, - from escriptcore/src/DataLazy.cpp:18: + from escriptcore/src/DataReady.h:23, + from escriptcore/src/DataReady.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/escriptcore/src/DataVectorOps.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/DataVectorOps.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -15095,16 +15129,16 @@ from escriptcore/src/DataVectorAlt.h:26, from escriptcore/src/DataVector.h:24, from escriptcore/src/DataAbstract.h:23, - from escriptcore/src/DataReady.h:23, - from escriptcore/src/DataReady.cpp:18: + from escriptcore/src/Data.h:24, + from escriptcore/src/DataTagged.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/escriptcore/src/DataVectorTaipan.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/DataVectorTaipan.cpp g++ -o debian/tmp3/posix/escriptcore/src/EscriptParams.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/EscriptParams.cpp -g++ -o debian/tmp3/posix/escriptcore/src/EsysMPI.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/EsysMPI.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -15127,7 +15161,9 @@ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/escriptcore/src/EsysMPI.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/EsysMPI.cpp g++ -o debian/tmp3/posix/escriptcore/src/ES_optype.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/ES_optype.cpp +g++ -o debian/tmp3/posix/escriptcore/src/ExceptionTranslators.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/ExceptionTranslators.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -15152,9 +15188,10 @@ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/escriptcore/src/ExceptionTranslators.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/ExceptionTranslators.cpp g++ -o debian/tmp3/posix/escriptcore/src/FunctionSpace.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/FunctionSpace.cpp g++ -o debian/tmp3/posix/escriptcore/src/FunctionSpaceFactory.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/FunctionSpaceFactory.cpp +g++ -o debian/tmp3/posix/escriptcore/src/LapackInverseHelper.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/LapackInverseHelper.cpp +g++ -o debian/tmp3/posix/escriptcore/src/MPIDataReducer.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/MPIDataReducer.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -15177,12 +15214,12 @@ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/escriptcore/src/LapackInverseHelper.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/LapackInverseHelper.cpp -g++ -o debian/tmp3/posix/escriptcore/src/MPIDataReducer.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/MPIDataReducer.cpp g++ -o debian/tmp3/posix/escriptcore/src/MPIScalarReducer.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/MPIScalarReducer.cpp g++ -o debian/tmp3/posix/escriptcore/src/NCHelper.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/NCHelper.cpp g++ -o debian/tmp3/posix/escriptcore/src/NonReducedVariable.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/NonReducedVariable.cpp g++ -o debian/tmp3/posix/escriptcore/src/NullDomain.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/NullDomain.cpp +g++ -o debian/tmp3/posix/escriptcore/src/pyerr.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/pyerr.cpp +g++ -o debian/tmp3/posix/escriptcore/src/Random.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/Random.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -15192,16 +15229,14 @@ from /usr/include/boost/shared_ptr.hpp:17, from escriptcore/src/EsysMPI.h:28, from escriptcore/src/AbstractDomain.h:24, - from escriptcore/src/FunctionSpace.h:24, - from escriptcore/src/FunctionSpace.cpp:18: + from escriptcore/src/FunctionSpaceFactory.h:22, + from escriptcore/src/FunctionSpaceFactory.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/escriptcore/src/pyerr.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/pyerr.cpp -g++ -o debian/tmp3/posix/escriptcore/src/Random.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/Random.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -15211,14 +15246,16 @@ from /usr/include/boost/shared_ptr.hpp:17, from escriptcore/src/EsysMPI.h:28, from escriptcore/src/AbstractDomain.h:24, - from escriptcore/src/FunctionSpaceFactory.h:22, - from escriptcore/src/FunctionSpaceFactory.cpp:18: + from escriptcore/src/FunctionSpace.h:24, + from escriptcore/src/FunctionSpace.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/escriptcore/src/SolverOptions.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/SolverOptions.cpp +g++ -o debian/tmp3/posix/escriptcore/src/SplitWorld.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/SplitWorld.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -15245,8 +15282,7 @@ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/escriptcore/src/SolverOptions.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/SolverOptions.cpp -g++ -o debian/tmp3/posix/escriptcore/src/SplitWorld.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/SplitWorld.cpp +g++ -o debian/tmp3/posix/escriptcore/src/SubWorld.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/SubWorld.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -15273,12 +15309,8 @@ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/escriptcore/src/SubWorld.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/SubWorld.cpp g++ -o debian/tmp3/posix/escriptcore/src/Taipan.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/Taipan.cpp g++ -o debian/tmp3/posix/escriptcore/src/TestDomain.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/TestDomain.cpp -g++ -o debian/tmp3/posix/escriptcore/src/Utils.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/Utils.cpp -g++ -o debian/tmp3/posix/escriptcore/src/WrappedArray.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/WrappedArray.cpp -/usr/bin/python3 scripts/py_comp.py dudley/py_src/factorywrappers.py debian/tmp3/posix/dudley/py/factorywrappers.pyc In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -15305,15 +15337,6 @@ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -Install file: "debian/tmp3/posix/dudley/py/factorywrappers.pyc" as "debian/stage3/esys/dudley/factorywrappers.pyc" -/usr/bin/python3 scripts/py_comp.py dudley/py_src/readers.py debian/tmp3/posix/dudley/py/readers.pyc -Install file: "debian/tmp3/posix/dudley/py/readers.pyc" as "debian/stage3/esys/dudley/readers.pyc" -/usr/bin/python3 scripts/py_comp.py escript/py_src/__init__.py debian/tmp3/posix/escript/__init__.pyc -/usr/bin/python3 scripts/py_comp.py escript/py_src/datamanager.py debian/tmp3/posix/escript/datamanager.pyc -Install file: "debian/tmp3/posix/escript/__init__.pyc" as "debian/stage3/esys/escript/__init__.pyc" -/usr/bin/python3 scripts/py_comp.py escript/py_src/linearPDEs.py debian/tmp3/posix/escript/linearPDEs.pyc -Install file: "debian/tmp3/posix/escript/datamanager.pyc" as "debian/stage3/esys/escript/datamanager.pyc" -/usr/bin/python3 scripts/py_comp.py escript/py_src/modelframe.py debian/tmp3/posix/escript/modelframe.pyc In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -15331,41 +15354,39 @@ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/escriptcore/src/Utils.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/Utils.cpp +g++ -o debian/tmp3/posix/escriptcore/src/WrappedArray.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/WrappedArray.cpp +/usr/bin/python3 scripts/py_comp.py dudley/py_src/factorywrappers.py debian/tmp3/posix/dudley/py/factorywrappers.pyc +Install file: "debian/tmp3/posix/dudley/py/factorywrappers.pyc" as "debian/stage3/esys/dudley/factorywrappers.pyc" +/usr/bin/python3 scripts/py_comp.py dudley/py_src/readers.py debian/tmp3/posix/dudley/py/readers.pyc +Install file: "debian/tmp3/posix/dudley/py/readers.pyc" as "debian/stage3/esys/dudley/readers.pyc" +/usr/bin/python3 scripts/py_comp.py escript/py_src/__init__.py debian/tmp3/posix/escript/__init__.pyc +Install file: "debian/tmp3/posix/escript/__init__.pyc" as "debian/stage3/esys/escript/__init__.pyc" +/usr/bin/python3 scripts/py_comp.py escript/py_src/datamanager.py debian/tmp3/posix/escript/datamanager.pyc +Install file: "debian/tmp3/posix/escript/datamanager.pyc" as "debian/stage3/esys/escript/datamanager.pyc" +/usr/bin/python3 scripts/py_comp.py escript/py_src/linearPDEs.py debian/tmp3/posix/escript/linearPDEs.pyc Install file: "debian/tmp3/posix/escript/linearPDEs.pyc" as "debian/stage3/esys/escript/linearPDEs.pyc" -/usr/bin/python3 scripts/py_comp.py escript/py_src/models.py debian/tmp3/posix/escript/models.pyc +/usr/bin/python3 scripts/py_comp.py escript/py_src/modelframe.py debian/tmp3/posix/escript/modelframe.pyc Install file: "debian/tmp3/posix/escript/modelframe.pyc" as "debian/stage3/esys/escript/modelframe.pyc" -/usr/bin/python3 scripts/py_comp.py escript/py_src/pdetools.py debian/tmp3/posix/escript/pdetools.pyc -/usr/bin/python3 scripts/py_comp.py escript/py_src/splitworld.py debian/tmp3/posix/escript/splitworld.pyc +/usr/bin/python3 scripts/py_comp.py escript/py_src/models.py debian/tmp3/posix/escript/models.pyc Install file: "debian/tmp3/posix/escript/models.pyc" as "debian/stage3/esys/escript/models.pyc" -/usr/bin/python3 scripts/py_comp.py escript/py_src/symbolic.py debian/tmp3/posix/escript/symbolic.pyc +/usr/bin/python3 scripts/py_comp.py escript/py_src/pdetools.py debian/tmp3/posix/escript/pdetools.pyc Install file: "debian/tmp3/posix/escript/pdetools.pyc" as "debian/stage3/esys/escript/pdetools.pyc" -/usr/bin/python3 scripts/py_comp.py escript/py_src/unitsSI.py debian/tmp3/posix/escript/unitsSI.pyc +/usr/bin/python3 scripts/py_comp.py escript/py_src/splitworld.py debian/tmp3/posix/escript/splitworld.pyc Install file: "debian/tmp3/posix/escript/splitworld.pyc" as "debian/stage3/esys/escript/splitworld.pyc" +/usr/bin/python3 scripts/py_comp.py escript/py_src/symbolic.py debian/tmp3/posix/escript/symbolic.pyc Install file: "debian/tmp3/posix/escript/symbolic.pyc" as "debian/stage3/esys/escript/symbolic.pyc" +/usr/bin/python3 scripts/py_comp.py escript/py_src/unitsSI.py debian/tmp3/posix/escript/unitsSI.pyc /usr/bin/python3 scripts/py_comp.py escript/py_src/util.py debian/tmp3/posix/escript/util.pyc -/usr/bin/python3 scripts/py_comp.py escriptcore/py_src/__init__.py debian/tmp3/posix/escriptcore/py/__init__.pyc Install file: "debian/tmp3/posix/escript/unitsSI.pyc" as "debian/stage3/esys/escript/unitsSI.pyc" +/usr/bin/python3 scripts/py_comp.py escriptcore/py_src/__init__.py debian/tmp3/posix/escriptcore/py/__init__.pyc +Install file: "debian/tmp3/posix/escript/util.pyc" as "debian/stage3/esys/escript/util.pyc" /usr/bin/python3 scripts/py_comp.py escriptcore/py_src/benchmark.py debian/tmp3/posix/escriptcore/py/benchmark.pyc Install file: "debian/tmp3/posix/escriptcore/py/__init__.pyc" as "debian/stage3/esys/escriptcore/__init__.pyc" /usr/bin/python3 scripts/py_comp.py escriptcore/py_src/datamanager.py debian/tmp3/posix/escriptcore/py/datamanager.pyc -Install file: "debian/tmp3/posix/escript/util.pyc" as "debian/stage3/esys/escript/util.pyc" -/usr/bin/python3 scripts/py_comp.py escriptcore/py_src/domainCouplers.py debian/tmp3/posix/escriptcore/py/domainCouplers.pyc Install file: "debian/tmp3/posix/escriptcore/py/benchmark.pyc" as "debian/stage3/esys/escriptcore/benchmark.pyc" +/usr/bin/python3 scripts/py_comp.py escriptcore/py_src/domainCouplers.py debian/tmp3/posix/escriptcore/py/domainCouplers.pyc Install file: "debian/tmp3/posix/escriptcore/py/datamanager.pyc" as "debian/stage3/esys/escriptcore/datamanager.pyc" -g++ -o debian/tmp3/posix/escriptcore/src/escriptcpp.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/escriptcpp.cpp -Install file: "debian/tmp3/posix/escriptcore/py/domainCouplers.pyc" as "debian/stage3/esys/escriptcore/domainCouplers.pyc" -/usr/bin/python3 scripts/py_comp.py escriptcore/py_src/faultsystems.py debian/tmp3/posix/escriptcore/py/faultsystems.pyc -/usr/bin/python3 scripts/py_comp.py escriptcore/py_src/flows.py debian/tmp3/posix/escriptcore/py/flows.pyc -Install file: "debian/tmp3/posix/escriptcore/py/flows.pyc" as "debian/stage3/esys/escriptcore/flows.pyc" -/usr/bin/python3 scripts/py_comp.py escriptcore/py_src/gmshrunner.py debian/tmp3/posix/escriptcore/py/gmshrunner.pyc -Install file: "debian/tmp3/posix/escriptcore/py/gmshrunner.pyc" as "debian/stage3/esys/escriptcore/gmshrunner.pyc" -/usr/bin/python3 scripts/py_comp.py escriptcore/py_src/heat.py debian/tmp3/posix/escriptcore/py/heat.pyc -Install file: "debian/tmp3/posix/escriptcore/py/faultsystems.pyc" as "debian/stage3/esys/escriptcore/faultsystems.pyc" -/usr/bin/python3 scripts/py_comp.py escriptcore/py_src/levelset.py debian/tmp3/posix/escriptcore/py/levelset.pyc -Install file: "debian/tmp3/posix/escriptcore/py/heat.pyc" as "debian/stage3/esys/escriptcore/heat.pyc" -Install file: "debian/tmp3/posix/escriptcore/py/levelset.pyc" as "debian/stage3/esys/escriptcore/levelset.pyc" -/usr/bin/python3 scripts/py_comp.py escriptcore/py_src/linearPDEs.py debian/tmp3/posix/escriptcore/py/linearPDEs.pyc -/usr/bin/python3 scripts/py_comp.py escriptcore/py_src/modelframe.py debian/tmp3/posix/escriptcore/py/modelframe.pyc In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -15387,14 +15408,32 @@ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -Install file: "debian/tmp3/posix/escriptcore/py/modelframe.pyc" as "debian/stage3/esys/escriptcore/modelframe.pyc" -/usr/bin/python3 scripts/py_comp.py escriptcore/py_src/models.py debian/tmp3/posix/escriptcore/py/models.pyc +g++ -o debian/tmp3/posix/escriptcore/src/escriptcpp.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/escriptcpp.cpp +Install file: "debian/tmp3/posix/escriptcore/py/domainCouplers.pyc" as "debian/stage3/esys/escriptcore/domainCouplers.pyc" +/usr/bin/python3 scripts/py_comp.py escriptcore/py_src/faultsystems.py debian/tmp3/posix/escriptcore/py/faultsystems.pyc +/usr/bin/python3 scripts/py_comp.py escriptcore/py_src/flows.py debian/tmp3/posix/escriptcore/py/flows.pyc +Install file: "debian/tmp3/posix/escriptcore/py/faultsystems.pyc" as "debian/stage3/esys/escriptcore/faultsystems.pyc" +/usr/bin/python3 scripts/py_comp.py escriptcore/py_src/gmshrunner.py debian/tmp3/posix/escriptcore/py/gmshrunner.pyc +Install file: "debian/tmp3/posix/escriptcore/py/flows.pyc" as "debian/stage3/esys/escriptcore/flows.pyc" +/usr/bin/python3 scripts/py_comp.py escriptcore/py_src/heat.py debian/tmp3/posix/escriptcore/py/heat.pyc +Install file: "debian/tmp3/posix/escriptcore/py/gmshrunner.pyc" as "debian/stage3/esys/escriptcore/gmshrunner.pyc" +/usr/bin/python3 scripts/py_comp.py escriptcore/py_src/levelset.py debian/tmp3/posix/escriptcore/py/levelset.pyc +Install file: "debian/tmp3/posix/escriptcore/py/heat.pyc" as "debian/stage3/esys/escriptcore/heat.pyc" +/usr/bin/python3 scripts/py_comp.py escriptcore/py_src/linearPDEs.py debian/tmp3/posix/escriptcore/py/linearPDEs.pyc +Install file: "debian/tmp3/posix/escriptcore/py/levelset.pyc" as "debian/stage3/esys/escriptcore/levelset.pyc" +/usr/bin/python3 scripts/py_comp.py escriptcore/py_src/modelframe.py debian/tmp3/posix/escriptcore/py/modelframe.pyc Install file: "debian/tmp3/posix/escriptcore/py/linearPDEs.pyc" as "debian/stage3/esys/escriptcore/linearPDEs.pyc" +/usr/bin/python3 scripts/py_comp.py escriptcore/py_src/models.py debian/tmp3/posix/escriptcore/py/models.pyc +Install file: "debian/tmp3/posix/escriptcore/py/modelframe.pyc" as "debian/stage3/esys/escriptcore/modelframe.pyc" /usr/bin/python3 scripts/py_comp.py escriptcore/py_src/mountains.py debian/tmp3/posix/escriptcore/py/mountains.pyc Install file: "debian/tmp3/posix/escriptcore/py/models.pyc" as "debian/stage3/esys/escriptcore/models.pyc" /usr/bin/python3 scripts/py_comp.py escriptcore/py_src/nonlinearPDE.py debian/tmp3/posix/escriptcore/py/nonlinearPDE.pyc Install file: "debian/tmp3/posix/escriptcore/py/mountains.pyc" as "debian/stage3/esys/escriptcore/mountains.pyc" /usr/bin/python3 scripts/py_comp.py escriptcore/py_src/pdetools.py debian/tmp3/posix/escriptcore/py/pdetools.pyc +Install file: "debian/tmp3/posix/escriptcore/py/nonlinearPDE.pyc" as "debian/stage3/esys/escriptcore/nonlinearPDE.pyc" +/usr/bin/python3 scripts/py_comp.py escriptcore/py_src/rheologies.py debian/tmp3/posix/escriptcore/py/rheologies.pyc +Install file: "debian/tmp3/posix/escriptcore/py/pdetools.pyc" as "debian/stage3/esys/escriptcore/pdetools.pyc" +/usr/bin/python3 scripts/py_comp.py escriptcore/py_src/runmodel.py debian/tmp3/posix/escriptcore/py/runmodel.pyc In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -15418,25 +15457,19 @@ /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ +Install file: "debian/tmp3/posix/escriptcore/py/rheologies.pyc" as "debian/stage3/esys/escriptcore/rheologies.pyc" +/usr/bin/python3 scripts/py_comp.py escriptcore/py_src/splitworld.py debian/tmp3/posix/escriptcore/py/splitworld.pyc /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -Install file: "debian/tmp3/posix/escriptcore/py/nonlinearPDE.pyc" as "debian/stage3/esys/escriptcore/nonlinearPDE.pyc" -/usr/bin/python3 scripts/py_comp.py escriptcore/py_src/rheologies.py debian/tmp3/posix/escriptcore/py/rheologies.pyc -Install file: "debian/tmp3/posix/escriptcore/py/pdetools.pyc" as "debian/stage3/esys/escriptcore/pdetools.pyc" -/usr/bin/python3 scripts/py_comp.py escriptcore/py_src/runmodel.py debian/tmp3/posix/escriptcore/py/runmodel.pyc -Install file: "debian/tmp3/posix/escriptcore/py/rheologies.pyc" as "debian/stage3/esys/escriptcore/rheologies.pyc" -/usr/bin/python3 scripts/py_comp.py escriptcore/py_src/splitworld.py debian/tmp3/posix/escriptcore/py/splitworld.pyc -/usr/bin/python3 scripts/py_comp.py escriptcore/py_src/start.py debian/tmp3/posix/escriptcore/py/start.pyc Install file: "debian/tmp3/posix/escriptcore/py/runmodel.pyc" as "debian/stage3/esys/escriptcore/runmodel.pyc" -/usr/bin/python3 scripts/py_comp.py escriptcore/py_src/symbolic/__init__.py debian/tmp3/posix/escriptcore/py/symbolic/__init__.pyc +/usr/bin/python3 scripts/py_comp.py escriptcore/py_src/start.py debian/tmp3/posix/escriptcore/py/start.pyc Install file: "debian/tmp3/posix/escriptcore/py/splitworld.pyc" as "debian/stage3/esys/escriptcore/splitworld.pyc" +/usr/bin/python3 scripts/py_comp.py escriptcore/py_src/symbolic/__init__.py debian/tmp3/posix/escriptcore/py/symbolic/__init__.pyc +Install file: "debian/tmp3/posix/escriptcore/py/start.pyc" as "debian/stage3/esys/escriptcore/start.pyc" /usr/bin/python3 scripts/py_comp.py escriptcore/py_src/symbolic/evaluator.py debian/tmp3/posix/escriptcore/py/symbolic/evaluator.pyc Install file: "debian/tmp3/posix/escriptcore/py/symbolic/__init__.pyc" as "debian/stage3/esys/escriptcore/symbolic/__init__.pyc" /usr/bin/python3 scripts/py_comp.py escriptcore/py_src/symbolic/functions.py debian/tmp3/posix/escriptcore/py/symbolic/functions.pyc -Install file: "debian/tmp3/posix/escriptcore/py/start.pyc" as "debian/stage3/esys/escriptcore/start.pyc" -/usr/bin/python3 scripts/py_comp.py escriptcore/py_src/symbolic/pretty.py debian/tmp3/posix/escriptcore/py/symbolic/pretty.pyc -Install file: "debian/tmp3/posix/escriptcore/py/symbolic/evaluator.pyc" as "debian/stage3/esys/escriptcore/symbolic/evaluator.pyc" In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -15451,40 +15484,40 @@ /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ -/usr/bin/python3 scripts/py_comp.py escriptcore/py_src/symbolic/symbol.py debian/tmp3/posix/escriptcore/py/symbolic/symbol.pyc +Install file: "debian/tmp3/posix/escriptcore/py/symbolic/functions.pyc" as "debian/stage3/esys/escriptcore/symbolic/functions.pyc" +Install file: "debian/tmp3/posix/escriptcore/py/symbolic/evaluator.pyc" as "debian/stage3/esys/escriptcore/symbolic/evaluator.pyc" +/usr/bin/python3 scripts/py_comp.py escriptcore/py_src/symbolic/pretty.py debian/tmp3/posix/escriptcore/py/symbolic/pretty.pyc /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -Install file: "debian/tmp3/posix/escriptcore/py/symbolic/functions.pyc" as "debian/stage3/esys/escriptcore/symbolic/functions.pyc" -/usr/bin/python3 scripts/py_comp.py escriptcore/py_src/symbolic/symconstants.py debian/tmp3/posix/escriptcore/py/symbolic/symconstants.pyc +/usr/bin/python3 scripts/py_comp.py escriptcore/py_src/symbolic/symbol.py debian/tmp3/posix/escriptcore/py/symbolic/symbol.pyc Install file: "debian/tmp3/posix/escriptcore/py/symbolic/pretty.pyc" as "debian/stage3/esys/escriptcore/symbolic/pretty.pyc" +/usr/bin/python3 scripts/py_comp.py escriptcore/py_src/symbolic/symconstants.py debian/tmp3/posix/escriptcore/py/symbolic/symconstants.pyc +Install file: "debian/tmp3/posix/escriptcore/py/symbolic/symbol.pyc" as "debian/stage3/esys/escriptcore/symbolic/symbol.pyc" /usr/bin/python3 scripts/py_comp.py escriptcore/py_src/symbolic/utils.py debian/tmp3/posix/escriptcore/py/symbolic/utils.pyc Install file: "debian/tmp3/posix/escriptcore/py/symbolic/symconstants.pyc" as "debian/stage3/esys/escriptcore/symbolic/symconstants.pyc" /usr/bin/python3 scripts/py_comp.py escriptcore/py_src/testing.py debian/tmp3/posix/escriptcore/py/testing.pyc -Install file: "debian/tmp3/posix/escriptcore/py/symbolic/symbol.pyc" as "debian/stage3/esys/escriptcore/symbolic/symbol.pyc" -Install file: "debian/tmp3/posix/escriptcore/py/symbolic/utils.pyc" as "debian/stage3/esys/escriptcore/symbolic/utils.pyc" /usr/bin/python3 scripts/py_comp.py escriptcore/py_src/unitsSI.py debian/tmp3/posix/escriptcore/py/unitsSI.pyc -/usr/bin/python3 scripts/py_comp.py escriptcore/py_src/utestselect.py debian/tmp3/posix/escriptcore/py/utestselect.pyc +Install file: "debian/tmp3/posix/escriptcore/py/symbolic/utils.pyc" as "debian/stage3/esys/escriptcore/symbolic/utils.pyc" Install file: "debian/tmp3/posix/escriptcore/py/testing.pyc" as "debian/stage3/esys/escriptcore/testing.pyc" +/usr/bin/python3 scripts/py_comp.py escriptcore/py_src/utestselect.py debian/tmp3/posix/escriptcore/py/utestselect.pyc /usr/bin/python3 scripts/py_comp.py escriptcore/py_src/util.py debian/tmp3/posix/escriptcore/py/util.pyc Install file: "debian/tmp3/posix/escriptcore/py/unitsSI.pyc" as "debian/stage3/esys/escriptcore/unitsSI.pyc" /usr/bin/python3 scripts/py_comp.py finley/py_src/__init__.py debian/tmp3/posix/finley/py/__init__.pyc -Install file: "debian/tmp3/posix/escriptcore/py/utestselect.pyc" as "debian/stage3/esys/escriptcore/utestselect.pyc" /usr/bin/python3 scripts/py_comp.py finley/py_src/factorywrappers.py debian/tmp3/posix/finley/py/factorywrappers.pyc -Install file: "debian/tmp3/posix/escriptcore/py/util.pyc" as "debian/stage3/esys/escriptcore/util.pyc" +Install file: "debian/tmp3/posix/escriptcore/py/utestselect.pyc" as "debian/stage3/esys/escriptcore/utestselect.pyc" Install file: "finley/src/DomainFactory.h" as "debian/stage3/include/finley/DomainFactory.h" -Install file: "debian/tmp3/posix/finley/py/__init__.pyc" as "debian/stage3/esys/finley/__init__.pyc" Install file: "debian/tmp3/posix/finley/py/factorywrappers.pyc" as "debian/stage3/esys/finley/factorywrappers.pyc" -Install file: "finley/src/FinleyDomain.h" as "debian/stage3/include/finley/FinleyDomain.h" +Install file: "debian/tmp3/posix/finley/py/__init__.pyc" as "debian/stage3/esys/finley/__init__.pyc" +Install file: "debian/tmp3/posix/escriptcore/py/util.pyc" as "debian/stage3/esys/escriptcore/util.pyc" Install file: "finley/src/Finley.h" as "debian/stage3/include/finley/Finley.h" +Install file: "finley/src/FinleyDomain.h" as "debian/stage3/include/finley/FinleyDomain.h" Install file: "finley/src/FinleyException.h" as "debian/stage3/include/finley/FinleyException.h" -Install file: "finley/src/ElementFile.h" as "debian/stage3/include/finley/ElementFile.h" -Install file: "finley/src/system_dep.h" as "debian/stage3/include/finley/system_dep.h" -Install file: "finley/src/NodeFile.h" as "debian/stage3/include/finley/NodeFile.h" -Install file: "finley/src/Util.h" as "debian/stage3/include/finley/Util.h" -g++ -o debian/tmp3/posix/finley/src/Assemble_AverageElementData.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Assemble_AverageElementData.cpp -Install file: "finley/src/ReferenceElementSets.h" as "debian/stage3/include/finley/ReferenceElementSets.h" -Install file: "finley/src/NodeMapping.h" as "debian/stage3/include/finley/NodeMapping.h" +Install file: "escriptcore/src/Utils.h" as "debian/stage3/include/escript/Utils.h" +g++ -o debian/tmp3/posix/finley/src/Assemble_LumpedSystem.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Assemble_LumpedSystem.cpp +g++ -o debian/tmp3/posix/finley/src/Assemble_NodeCoordinates.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Assemble_NodeCoordinates.cpp +g++ -o debian/tmp3/posix/finley/src/Assemble_PDE_System_2D.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Assemble_PDE_System_2D.cpp +g++ -o debian/tmp3/posix/finley/src/Assemble_integrate.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Assemble_integrate.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -15503,13 +15536,7 @@ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/finley/src/Assemble_CopyElementData.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Assemble_CopyElementData.cpp -Install file: "finley/src/ReferenceElements.h" as "debian/stage3/include/finley/ReferenceElements.h" -g++ -o debian/tmp3/posix/finley/src/Assemble_CopyNodalData.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Assemble_CopyNodalData.cpp -Install file: "finley/src/Quadrature.h" as "debian/stage3/include/finley/Quadrature.h" -Install file: "finley/src/ShapeFunctions.h" as "debian/stage3/include/finley/ShapeFunctions.h" -g++ -o debian/tmp3/posix/finley/src/finleycpp.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/finleycpp.cpp -g++ -o debian/tmp3/posix/finley/src/Assemble_LumpedSystem.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Assemble_LumpedSystem.cpp +g++ -o debian/tmp3/posix/finley/src/Assemble_PDE.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Assemble_PDE.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -15527,7 +15554,7 @@ from escriptcore/src/DataVector.h:24, from escriptcore/src/DataAbstract.h:23, from escriptcore/src/Data.h:24, - from escriptcore/src/WrappedArray.cpp:18: + from escriptcore/src/Utils.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ @@ -15551,14 +15578,13 @@ from escriptcore/src/DataVector.h:24, from escriptcore/src/DataAbstract.h:23, from escriptcore/src/Data.h:24, - from escriptcore/src/Utils.cpp:18: + from escriptcore/src/WrappedArray.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/finley/src/Assemble_NodeCoordinates.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Assemble_NodeCoordinates.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -15576,7 +15602,7 @@ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/finley/src/Assemble_PDE.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Assemble_PDE.cpp +g++ -o debian/tmp3/posix/finley/src/Assemble_AverageElementData.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Assemble_AverageElementData.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -15587,7 +15613,7 @@ from debian/stage3/include/escript/EsysMPI.h:28, from finley/src/Finley.h:32, from finley/src/Assemble.h:27, - from finley/src/Assemble_CopyNodalData.cpp:18: + from finley/src/Assemble_LumpedSystem.cpp:28: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ @@ -15604,7 +15630,7 @@ from debian/stage3/include/escript/EsysMPI.h:28, from finley/src/Finley.h:32, from finley/src/Assemble.h:27, - from finley/src/Assemble_CopyElementData.cpp:25: + from finley/src/Assemble_PDE_System_2D.cpp:41: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ @@ -15621,7 +15647,7 @@ from debian/stage3/include/escript/EsysMPI.h:28, from finley/src/Finley.h:32, from finley/src/Assemble.h:27, - from finley/src/Assemble_AverageElementData.cpp:25: + from finley/src/Assemble_integrate.cpp:25: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ @@ -15636,8 +15662,9 @@ from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, from /usr/include/boost/shared_ptr.hpp:17, from debian/stage3/include/escript/EsysMPI.h:28, - from debian/stage3/include/finley/Finley.h:32, - from finley/src/finleycpp.cpp:18: + from finley/src/Finley.h:32, + from finley/src/Assemble.h:27, + from finley/src/Assemble_PDE.cpp:48: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ @@ -15654,14 +15681,17 @@ from debian/stage3/include/escript/EsysMPI.h:28, from finley/src/Finley.h:32, from finley/src/Assemble.h:27, - from finley/src/Assemble_LumpedSystem.cpp:28: + from finley/src/Assemble_NodeCoordinates.cpp:25: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/finley/src/Assemble_PDE_System_3D.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Assemble_PDE_System_3D.cpp g++ -o debian/tmp3/posix/finley/src/Assemble_PDE_Points.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Assemble_PDE_Points.cpp +g++ -o debian/tmp3/posix/finley/src/Assemble_gradient.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Assemble_gradient.cpp +g++ -o debian/tmp3/posix/finley/src/Assemble_PDE_System_C.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Assemble_PDE_System_C.cpp g++ -o debian/tmp3/posix/finley/src/Assemble_PDE_Single_1D.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Assemble_PDE_Single_1D.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, @@ -15673,16 +15703,17 @@ from debian/stage3/include/escript/EsysMPI.h:28, from finley/src/Finley.h:32, from finley/src/Assemble.h:27, - from finley/src/Assemble_NodeCoordinates.cpp:25: + from finley/src/Assemble_AverageElementData.cpp:25: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/finley/src/Assemble_PDE_Single_2D.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Assemble_PDE_Single_2D.cpp /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/finley/src/Assemble_addToSystemMatrix.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Assemble_addToSystemMatrix.cpp +g++ -o debian/tmp3/posix/finley/src/Assemble_PDE_Single_2D.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Assemble_PDE_Single_2D.cpp +g++ -o debian/tmp3/posix/finley/src/Assemble_getAssembleParameters.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Assemble_getAssembleParameters.cpp g++ -o debian/tmp3/posix/finley/src/Assemble_PDE_Single_3D.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Assemble_PDE_Single_3D.cpp -g++ -o debian/tmp3/posix/finley/src/Assemble_PDE_Single_C.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Assemble_PDE_Single_C.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -15693,15 +15724,13 @@ from debian/stage3/include/escript/EsysMPI.h:28, from finley/src/Finley.h:32, from finley/src/Assemble.h:27, - from finley/src/Assemble_PDE.cpp:48: + from finley/src/Assemble_PDE_System_3D.cpp:41: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/finley/src/Assemble_PDE_System_1D.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Assemble_PDE_System_1D.cpp -g++ -o debian/tmp3/posix/finley/src/Assemble_PDE_System_2D.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Assemble_PDE_System_2D.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -15719,7 +15748,7 @@ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/finley/src/Assemble_PDE_System_3D.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Assemble_PDE_System_3D.cpp +g++ -o debian/tmp3/posix/finley/src/Assemble_getNormal.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Assemble_getNormal.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -15730,14 +15759,13 @@ from debian/stage3/include/escript/EsysMPI.h:28, from finley/src/Finley.h:32, from finley/src/Assemble.h:27, - from finley/src/Assemble_PDE_Single_1D.cpp:39: + from finley/src/Assemble_gradient.cpp:26: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/escriptcore/src/libescript.so -Wl,-z,relro -Wl,-z,now -fopenmp -shared debian/tmp3/posix/escriptcore/src/AbstractContinuousDomain.os debian/tmp3/posix/escriptcore/src/AbstractDomain.os debian/tmp3/posix/escriptcore/src/AbstractReducer.os debian/tmp3/posix/escriptcore/src/AbstractSystemMatrix.os debian/tmp3/posix/escriptcore/src/AbstractTransportProblem.os debian/tmp3/posix/escriptcore/src/ArrayOps.os debian/tmp3/posix/escriptcore/src/BinaryDataReadyOps.os debian/tmp3/posix/escriptcore/src/Data.os debian/tmp3/posix/escriptcore/src/DataAbstract.os debian/tmp3/posix/escriptcore/src/DataConstant.os debian/tmp3/posix/escriptcore/src/DataEmpty.os debian/tmp3/posix/escriptcore/src/DataExpanded.os debian/tmp3/posix/escriptcore/src/DataFactory.os debian/tmp3/posix/escriptcore/src/DataLazy.os debian/tmp3/posix/escriptcore/src/DataReady.os debian/tmp3/posix/escriptcore/src/DataTagged.os debian/tmp3/posix/escriptcore/src/DataTypes.os debian/tmp3/posix/escriptcore/src/DataVector.os debian/tmp3/posix/escriptcore/src/DataVectorAlt.os debian/tmp3/posix/escriptcore/src/DataVectorOps.os debian/tmp3/posix/escriptcore/src/DataVectorTaipan.os debian/tmp3/posix/escriptcore/src/EscriptParams.os debian/tmp3/posix/escriptcore/src/EsysMPI.os debian/tmp3/posix/escriptcore/src/ES_optype.os debian/tmp3/posix/escriptcore/src/ExceptionTranslators.os debian/tmp3/posix/escriptcore/src/FunctionSpace.os debian/tmp3/posix/escriptcore/src/FunctionSpaceFactory.os debian/tmp3/posix/escriptcore/src/LapackInverseHelper.os debian/tmp3/posix/escriptcore/src/MPIDataReducer.os debian/tmp3/posix/escriptcore/src/MPIScalarReducer.os debian/tmp3/posix/escriptcore/src/NCHelper.os debian/tmp3/posix/escriptcore/src/NonReducedVariable.os debian/tmp3/posix/escriptcore/src/NullDomain.os debian/tmp3/posix/escriptcore/src/pyerr.os debian/tmp3/posix/escriptcore/src/Random.os debian/tmp3/posix/escriptcore/src/SolverOptions.os debian/tmp3/posix/escriptcore/src/SplitWorld.os debian/tmp3/posix/escriptcore/src/SubWorld.os debian/tmp3/posix/escriptcore/src/Taipan.os debian/tmp3/posix/escriptcore/src/TestDomain.os debian/tmp3/posix/escriptcore/src/Utils.os debian/tmp3/posix/escriptcore/src/WrappedArray.os -Ldebian/stage3/lib -L/usr/lib/python3.9/config-3.9-aarch64-linux-gnu -L/usr/lib/aarch64-linux-gnu -L/usr/lib -lnetcdf_c++4 -lpython3.9 -lboost_python39 -lboost_numpy39 In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -15748,14 +15776,13 @@ from debian/stage3/include/escript/EsysMPI.h:28, from finley/src/Finley.h:32, from finley/src/Assemble.h:27, - from finley/src/Assemble_PDE_Single_3D.cpp:38: + from finley/src/Assemble_PDE_Single_1D.cpp:39: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/finley/src/Assemble_PDE_System_C.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Assemble_PDE_System_C.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -15766,10 +15793,13 @@ from debian/stage3/include/escript/EsysMPI.h:28, from finley/src/Finley.h:32, from finley/src/Assemble.h:27, - from finley/src/Assemble_PDE_Single_C.cpp:34: + from finley/src/Assemble_PDE_System_C.cpp:35: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ +/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' + 13 | BOOST_HEADER_DEPRECATED("") + | ^~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -15780,19 +15810,14 @@ from debian/stage3/include/escript/EsysMPI.h:28, from finley/src/Finley.h:32, from finley/src/Assemble.h:27, - from finley/src/Assemble_PDE_Single_2D.cpp:38: + from finley/src/Assemble_addToSystemMatrix.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' - 13 | BOOST_HEADER_DEPRECATED("") - | ^~~~~~~~~~~~~~~~~~~~~~~ -Install file: "debian/tmp3/posix/escriptcore/src/libescript.so" as "debian/stage3/lib/libescript.so" -g++ -o debian/tmp3/posix/finley/src/Assemble_addToSystemMatrix.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Assemble_addToSystemMatrix.cpp -g++ -o debian/tmp3/posix/paso/src/libpaso.so -Wl,-z,relro -Wl,-z,now -fopenmp -shared debian/tmp3/posix/paso/src/BiCGStab.os debian/tmp3/posix/paso/src/Coupler.os debian/tmp3/posix/paso/src/FCT_Solver.os debian/tmp3/posix/paso/src/FluxLimiter.os debian/tmp3/posix/paso/src/Functions.os debian/tmp3/posix/paso/src/GMRES.os debian/tmp3/posix/paso/src/GMRES2.os debian/tmp3/posix/paso/src/MKL.os debian/tmp3/posix/paso/src/MUMPS.os debian/tmp3/posix/paso/src/NewtonGMRES.os debian/tmp3/posix/paso/src/Options.os debian/tmp3/posix/paso/src/PCG.os debian/tmp3/posix/paso/src/PasoUtil.os debian/tmp3/posix/paso/src/Pattern.os debian/tmp3/posix/paso/src/Pattern_mis.os debian/tmp3/posix/paso/src/Pattern_reduceBandwidth.os debian/tmp3/posix/paso/src/Preconditioner.os debian/tmp3/posix/paso/src/ReactiveSolver.os debian/tmp3/posix/paso/src/SchurComplement.os debian/tmp3/posix/paso/src/Smoother.os debian/tmp3/posix/paso/src/Solver.os debian/tmp3/posix/paso/src/Solver_Function.os debian/tmp3/posix/paso/src/SparseMatrix.os debian/tmp3/posix/paso/src/SparseMatrix_getSubmatrix.os debian/tmp3/posix/paso/src/SparseMatrix_nullifyRowsAndCols.os debian/tmp3/posix/paso/src/SparseMatrix_saveHB.os debian/tmp3/posix/paso/src/SparseMatrix_MatrixMatrix.os debian/tmp3/posix/paso/src/SparseMatrix_MatrixMatrixTranspose.os debian/tmp3/posix/paso/src/SparseMatrix_MatrixVector.os debian/tmp3/posix/paso/src/SystemMatrix.os debian/tmp3/posix/paso/src/SystemMatrix_MatrixVector.os debian/tmp3/posix/paso/src/SystemMatrix_copyRemoteCoupleBlock.os debian/tmp3/posix/paso/src/SystemMatrix_debug.os debian/tmp3/posix/paso/src/SystemMatrix_extendedRows.os debian/tmp3/posix/paso/src/SystemMatrix_loadMM.os debian/tmp3/posix/paso/src/SystemMatrix_mergeMainAndCouple.os debian/tmp3/posix/paso/src/SystemMatrixPattern.os debian/tmp3/posix/paso/src/SystemMatrixPattern_unrollBlocks.os debian/tmp3/posix/paso/src/Transport.os debian/tmp3/posix/paso/src/Transport_solve.os debian/tmp3/posix/paso/src/ILU.os debian/tmp3/posix/paso/src/MINRES.os debian/tmp3/posix/paso/src/RILU.os debian/tmp3/posix/paso/src/TFQMR.os debian/tmp3/posix/paso/src/UMFPACK.os debian/tmp3/posix/paso/src/mmio.os debian/tmp3/posix/paso/src/performance.os debian/tmp3/posix/paso/src/solve.os -Ldebian/stage3/lib -L/usr/lib/python3.9/config-3.9-aarch64-linux-gnu -L/usr/lib/aarch64-linux-gnu -L/usr/lib -lescript -lnetcdf_c++4 -lumfpack -lblas -lamd -lpython3.9 -lboost_python39 -lboost_numpy39 +g++ -o debian/tmp3/posix/finley/src/Assemble_PDE_Single_C.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Assemble_PDE_Single_C.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -15803,14 +15828,13 @@ from debian/stage3/include/escript/EsysMPI.h:28, from finley/src/Finley.h:32, from finley/src/Assemble.h:27, - from finley/src/Assemble_PDE_System_2D.cpp:41: + from finley/src/Assemble_PDE_Single_2D.cpp:38: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -Install file: "debian/tmp3/posix/paso/src/libpaso.so" as "debian/stage3/lib/libpaso.so" In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -15821,15 +15845,13 @@ from debian/stage3/include/escript/EsysMPI.h:28, from finley/src/Finley.h:32, from finley/src/Assemble.h:27, - from finley/src/Assemble_PDE_System_1D.cpp:42: + from finley/src/Assemble_getAssembleParameters.cpp:24: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/finley/src/Assemble_getAssembleParameters.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Assemble_getAssembleParameters.cpp /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/dudley/src/libdudley.so -Wl,-z,relro -Wl,-z,now -fopenmp -shared debian/tmp3/posix/dudley/src/Assemble_AverageElementData.os debian/tmp3/posix/dudley/src/Assemble_CopyElementData.os debian/tmp3/posix/dudley/src/Assemble_CopyNodalData.os debian/tmp3/posix/dudley/src/Assemble_LumpedSystem.os debian/tmp3/posix/dudley/src/Assemble_NodeCoordinates.os debian/tmp3/posix/dudley/src/Assemble_PDE.os debian/tmp3/posix/dudley/src/Assemble_PDE_Points.os debian/tmp3/posix/dudley/src/Assemble_PDE_Single_2D.os debian/tmp3/posix/dudley/src/Assemble_PDE_Single_3D.os debian/tmp3/posix/dudley/src/Assemble_PDE_System_2D.os debian/tmp3/posix/dudley/src/Assemble_PDE_System_3D.os debian/tmp3/posix/dudley/src/Assemble_addToSystemMatrix.os debian/tmp3/posix/dudley/src/Assemble_getAssembleParameters.os debian/tmp3/posix/dudley/src/Assemble_getNormal.os debian/tmp3/posix/dudley/src/Assemble_getSize.os debian/tmp3/posix/dudley/src/Assemble_integrate.os debian/tmp3/posix/dudley/src/Assemble_interpolate.os debian/tmp3/posix/dudley/src/DomainFactory.os debian/tmp3/posix/dudley/src/DudleyDomain.os debian/tmp3/posix/dudley/src/ElementFile.os debian/tmp3/posix/dudley/src/ElementFile_createColoring.os debian/tmp3/posix/dudley/src/ElementFile_distributeByRankOfDOF.os debian/tmp3/posix/dudley/src/ElementFile_jacobians.os debian/tmp3/posix/dudley/src/IndexList.os debian/tmp3/posix/dudley/src/Mesh_distributeByRankOfDOF.os debian/tmp3/posix/dudley/src/Mesh_getPattern.os debian/tmp3/posix/dudley/src/Mesh_optimizeDOFDistribution.os debian/tmp3/posix/dudley/src/Mesh_optimizeDOFLabeling.os debian/tmp3/posix/dudley/src/Mesh_read.os debian/tmp3/posix/dudley/src/Mesh_readGmsh.os debian/tmp3/posix/dudley/src/Mesh_resolveNodeIds.os debian/tmp3/posix/dudley/src/Mesh_tet4.os debian/tmp3/posix/dudley/src/Mesh_tri3.os debian/tmp3/posix/dudley/src/Mesh_write.os debian/tmp3/posix/dudley/src/NodeFile.os debian/tmp3/posix/dudley/src/NodeFile_createDenseLabelings.os debian/tmp3/posix/dudley/src/NodeFile_createMappings.os debian/tmp3/posix/dudley/src/NodeFile_createTrilinosGraph.os debian/tmp3/posix/dudley/src/NodeFile_gather.os debian/tmp3/posix/dudley/src/ShapeTable.os debian/tmp3/posix/dudley/src/Util.os debian/tmp3/posix/dudley/src/Assemble_gradient.os debian/tmp3/posix/dudley/src/Assemble_jacobians.os -Ldebian/stage3/lib -L/usr/lib/python3.9/config-3.9-aarch64-linux-gnu -L/usr/lib/aarch64-linux-gnu -L/usr/lib -lpaso -lescript -lnetcdf_c++4 -lumfpack -lblas -lamd -lpython3.9 -lboost_python39 -lboost_numpy39 In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -15840,22 +15862,17 @@ from debian/stage3/include/escript/EsysMPI.h:28, from finley/src/Finley.h:32, from finley/src/Assemble.h:27, - from finley/src/Assemble_PDE_System_3D.cpp:41: + from finley/src/Assemble_PDE_Single_3D.cpp:38: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -Install file: "debian/tmp3/posix/dudley/src/libdudley.so" as "debian/stage3/lib/libdudley.so" -g++ -o debian/tmp3/posix/finley/src/Assemble_getNormal.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Assemble_getNormal.cpp -g++ -o debian/tmp3/posix/dudley/src/dudleycpp.so -Wl,-z,relro -Wl,-z,now -fopenmp -shared debian/tmp3/posix/dudley/src/dudleycpp.os -Ldebian/stage3/lib -L/usr/lib/python3.9/config-3.9-aarch64-linux-gnu -L/usr/lib/aarch64-linux-gnu -L/usr/lib -ldudley -lpaso -lescript -lnetcdf_c++4 -lumfpack -lblas -lamd -lpython3.9 -lboost_python39 -lboost_numpy39 +g++ -o debian/tmp3/posix/escriptcore/src/libescript.so -Wl,-z,relro -Wl,-z,now -fopenmp -shared debian/tmp3/posix/escriptcore/src/AbstractContinuousDomain.os debian/tmp3/posix/escriptcore/src/AbstractDomain.os debian/tmp3/posix/escriptcore/src/AbstractReducer.os debian/tmp3/posix/escriptcore/src/AbstractSystemMatrix.os debian/tmp3/posix/escriptcore/src/AbstractTransportProblem.os debian/tmp3/posix/escriptcore/src/ArrayOps.os debian/tmp3/posix/escriptcore/src/BinaryDataReadyOps.os debian/tmp3/posix/escriptcore/src/Data.os debian/tmp3/posix/escriptcore/src/DataAbstract.os debian/tmp3/posix/escriptcore/src/DataConstant.os debian/tmp3/posix/escriptcore/src/DataEmpty.os debian/tmp3/posix/escriptcore/src/DataExpanded.os debian/tmp3/posix/escriptcore/src/DataFactory.os debian/tmp3/posix/escriptcore/src/DataLazy.os debian/tmp3/posix/escriptcore/src/DataReady.os debian/tmp3/posix/escriptcore/src/DataTagged.os debian/tmp3/posix/escriptcore/src/DataTypes.os debian/tmp3/posix/escriptcore/src/DataVector.os debian/tmp3/posix/escriptcore/src/DataVectorAlt.os debian/tmp3/posix/escriptcore/src/DataVectorOps.os debian/tmp3/posix/escriptcore/src/DataVectorTaipan.os debian/tmp3/posix/escriptcore/src/EscriptParams.os debian/tmp3/posix/escriptcore/src/EsysMPI.os debian/tmp3/posix/escriptcore/src/ES_optype.os debian/tmp3/posix/escriptcore/src/ExceptionTranslators.os debian/tmp3/posix/escriptcore/src/FunctionSpace.os debian/tmp3/posix/escriptcore/src/FunctionSpaceFactory.os debian/tmp3/posix/escriptcore/src/LapackInverseHelper.os debian/tmp3/posix/escriptcore/src/MPIDataReducer.os debian/tmp3/posix/escriptcore/src/MPIScalarReducer.os debian/tmp3/posix/escriptcore/src/NCHelper.os debian/tmp3/posix/escriptcore/src/NonReducedVariable.os debian/tmp3/posix/escriptcore/src/NullDomain.os debian/tmp3/posix/escriptcore/src/pyerr.os debian/tmp3/posix/escriptcore/src/Random.os debian/tmp3/posix/escriptcore/src/SolverOptions.os debian/tmp3/posix/escriptcore/src/SplitWorld.os debian/tmp3/posix/escriptcore/src/SubWorld.os debian/tmp3/posix/escriptcore/src/Taipan.os debian/tmp3/posix/escriptcore/src/TestDomain.os debian/tmp3/posix/escriptcore/src/Utils.os debian/tmp3/posix/escriptcore/src/WrappedArray.os -Ldebian/stage3/lib -L/usr/lib/python3.9/config-3.9-aarch64-linux-gnu -L/usr/lib/aarch64-linux-gnu -L/usr/lib -lnetcdf_c++4 -lpython3.9 -lboost_python39 -lboost_numpy39 +g++ -o debian/tmp3/posix/finley/src/Assemble_CopyElementData.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Assemble_CopyElementData.cpp g++ -o debian/tmp3/posix/finley/src/Assemble_getSize.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Assemble_getSize.cpp -Install file: "debian/tmp3/posix/dudley/src/dudleycpp.so" as "debian/stage3/esys/dudley/dudleycpp.so" -g++ -o debian/tmp3/posix/finley/src/Assemble_gradient.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Assemble_gradient.cpp -Install file: "escriptcore/src/Utils.h" as "debian/stage3/include/escript/Utils.h" -g++ -o debian/tmp3/posix/finley/src/Assemble_integrate.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Assemble_integrate.cpp -g++ -o debian/tmp3/posix/finley/src/Assemble_interpolate.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Assemble_interpolate.cpp +g++ -o debian/tmp3/posix/finley/src/Assemble_PDE_System_1D.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Assemble_PDE_System_1D.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -15866,14 +15883,30 @@ from debian/stage3/include/escript/EsysMPI.h:28, from finley/src/Finley.h:32, from finley/src/Assemble.h:27, - from finley/src/Assemble_addToSystemMatrix.cpp:18: + from finley/src/Assemble_getNormal.cpp:26: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/finley/src/Assemble_jacobians.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Assemble_jacobians.cpp /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/finley/src/Assemble_CopyNodalData.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Assemble_CopyNodalData.cpp +Install file: "debian/tmp3/posix/escriptcore/src/libescript.so" as "debian/stage3/lib/libescript.so" +g++ -o debian/tmp3/posix/paso/src/libpaso.so -Wl,-z,relro -Wl,-z,now -fopenmp -shared debian/tmp3/posix/paso/src/BiCGStab.os debian/tmp3/posix/paso/src/Coupler.os debian/tmp3/posix/paso/src/FCT_Solver.os debian/tmp3/posix/paso/src/FluxLimiter.os debian/tmp3/posix/paso/src/Functions.os debian/tmp3/posix/paso/src/GMRES.os debian/tmp3/posix/paso/src/GMRES2.os debian/tmp3/posix/paso/src/MKL.os debian/tmp3/posix/paso/src/MUMPS.os debian/tmp3/posix/paso/src/NewtonGMRES.os debian/tmp3/posix/paso/src/Options.os debian/tmp3/posix/paso/src/PCG.os debian/tmp3/posix/paso/src/PasoUtil.os debian/tmp3/posix/paso/src/Pattern.os debian/tmp3/posix/paso/src/Pattern_mis.os debian/tmp3/posix/paso/src/Pattern_reduceBandwidth.os debian/tmp3/posix/paso/src/Preconditioner.os debian/tmp3/posix/paso/src/ReactiveSolver.os debian/tmp3/posix/paso/src/SchurComplement.os debian/tmp3/posix/paso/src/Smoother.os debian/tmp3/posix/paso/src/Solver.os debian/tmp3/posix/paso/src/Solver_Function.os debian/tmp3/posix/paso/src/SparseMatrix.os debian/tmp3/posix/paso/src/SparseMatrix_getSubmatrix.os debian/tmp3/posix/paso/src/SparseMatrix_nullifyRowsAndCols.os debian/tmp3/posix/paso/src/SparseMatrix_saveHB.os debian/tmp3/posix/paso/src/SparseMatrix_MatrixMatrix.os debian/tmp3/posix/paso/src/SparseMatrix_MatrixMatrixTranspose.os debian/tmp3/posix/paso/src/SparseMatrix_MatrixVector.os debian/tmp3/posix/paso/src/SystemMatrix.os debian/tmp3/posix/paso/src/SystemMatrix_MatrixVector.os debian/tmp3/posix/paso/src/SystemMatrix_copyRemoteCoupleBlock.os debian/tmp3/posix/paso/src/SystemMatrix_debug.os debian/tmp3/posix/paso/src/SystemMatrix_extendedRows.os debian/tmp3/posix/paso/src/SystemMatrix_loadMM.os debian/tmp3/posix/paso/src/SystemMatrix_mergeMainAndCouple.os debian/tmp3/posix/paso/src/SystemMatrixPattern.os debian/tmp3/posix/paso/src/SystemMatrixPattern_unrollBlocks.os debian/tmp3/posix/paso/src/Transport.os debian/tmp3/posix/paso/src/Transport_solve.os debian/tmp3/posix/paso/src/ILU.os debian/tmp3/posix/paso/src/MINRES.os debian/tmp3/posix/paso/src/RILU.os debian/tmp3/posix/paso/src/TFQMR.os debian/tmp3/posix/paso/src/UMFPACK.os debian/tmp3/posix/paso/src/mmio.os debian/tmp3/posix/paso/src/performance.os debian/tmp3/posix/paso/src/solve.os -Ldebian/stage3/lib -L/usr/lib/python3.9/config-3.9-aarch64-linux-gnu -L/usr/lib/aarch64-linux-gnu -L/usr/lib -lescript -lnetcdf_c++4 -lumfpack -lblas -lamd -lpython3.9 -lboost_python39 -lboost_numpy39 +Install file: "debian/tmp3/posix/paso/src/libpaso.so" as "debian/stage3/lib/libpaso.so" +g++ -o debian/tmp3/posix/dudley/src/libdudley.so -Wl,-z,relro -Wl,-z,now -fopenmp -shared debian/tmp3/posix/dudley/src/Assemble_AverageElementData.os debian/tmp3/posix/dudley/src/Assemble_CopyElementData.os debian/tmp3/posix/dudley/src/Assemble_CopyNodalData.os debian/tmp3/posix/dudley/src/Assemble_LumpedSystem.os debian/tmp3/posix/dudley/src/Assemble_NodeCoordinates.os debian/tmp3/posix/dudley/src/Assemble_PDE.os debian/tmp3/posix/dudley/src/Assemble_PDE_Points.os debian/tmp3/posix/dudley/src/Assemble_PDE_Single_2D.os debian/tmp3/posix/dudley/src/Assemble_PDE_Single_3D.os debian/tmp3/posix/dudley/src/Assemble_PDE_System_2D.os debian/tmp3/posix/dudley/src/Assemble_PDE_System_3D.os debian/tmp3/posix/dudley/src/Assemble_addToSystemMatrix.os debian/tmp3/posix/dudley/src/Assemble_getAssembleParameters.os debian/tmp3/posix/dudley/src/Assemble_getNormal.os debian/tmp3/posix/dudley/src/Assemble_getSize.os debian/tmp3/posix/dudley/src/Assemble_integrate.os debian/tmp3/posix/dudley/src/Assemble_interpolate.os debian/tmp3/posix/dudley/src/DomainFactory.os debian/tmp3/posix/dudley/src/DudleyDomain.os debian/tmp3/posix/dudley/src/ElementFile.os debian/tmp3/posix/dudley/src/ElementFile_createColoring.os debian/tmp3/posix/dudley/src/ElementFile_distributeByRankOfDOF.os debian/tmp3/posix/dudley/src/ElementFile_jacobians.os debian/tmp3/posix/dudley/src/IndexList.os debian/tmp3/posix/dudley/src/Mesh_distributeByRankOfDOF.os debian/tmp3/posix/dudley/src/Mesh_getPattern.os debian/tmp3/posix/dudley/src/Mesh_optimizeDOFDistribution.os debian/tmp3/posix/dudley/src/Mesh_optimizeDOFLabeling.os debian/tmp3/posix/dudley/src/Mesh_read.os debian/tmp3/posix/dudley/src/Mesh_readGmsh.os debian/tmp3/posix/dudley/src/Mesh_resolveNodeIds.os debian/tmp3/posix/dudley/src/Mesh_tet4.os debian/tmp3/posix/dudley/src/Mesh_tri3.os debian/tmp3/posix/dudley/src/Mesh_write.os debian/tmp3/posix/dudley/src/NodeFile.os debian/tmp3/posix/dudley/src/NodeFile_createDenseLabelings.os debian/tmp3/posix/dudley/src/NodeFile_createMappings.os debian/tmp3/posix/dudley/src/NodeFile_createTrilinosGraph.os debian/tmp3/posix/dudley/src/NodeFile_gather.os debian/tmp3/posix/dudley/src/ShapeTable.os debian/tmp3/posix/dudley/src/Util.os debian/tmp3/posix/dudley/src/Assemble_gradient.os debian/tmp3/posix/dudley/src/Assemble_jacobians.os -Ldebian/stage3/lib -L/usr/lib/python3.9/config-3.9-aarch64-linux-gnu -L/usr/lib/aarch64-linux-gnu -L/usr/lib -lpaso -lescript -lnetcdf_c++4 -lumfpack -lblas -lamd -lpython3.9 -lboost_python39 -lboost_numpy39 +Install file: "finley/src/system_dep.h" as "debian/stage3/include/finley/system_dep.h" +Install file: "finley/src/ElementFile.h" as "debian/stage3/include/finley/ElementFile.h" +Install file: "finley/src/NodeFile.h" as "debian/stage3/include/finley/NodeFile.h" +Install file: "finley/src/Util.h" as "debian/stage3/include/finley/Util.h" +Install file: "finley/src/ReferenceElementSets.h" as "debian/stage3/include/finley/ReferenceElementSets.h" +Install file: "finley/src/NodeMapping.h" as "debian/stage3/include/finley/NodeMapping.h" +Install file: "finley/src/ReferenceElements.h" as "debian/stage3/include/finley/ReferenceElements.h" +Install file: "finley/src/Quadrature.h" as "debian/stage3/include/finley/Quadrature.h" +Install file: "finley/src/ShapeFunctions.h" as "debian/stage3/include/finley/ShapeFunctions.h" +g++ -o debian/tmp3/posix/finley/src/finleycpp.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/finleycpp.cpp +Install file: "debian/tmp3/posix/dudley/src/libdudley.so" as "debian/stage3/lib/libdudley.so" +g++ -o debian/tmp3/posix/dudley/src/dudleycpp.so -Wl,-z,relro -Wl,-z,now -fopenmp -shared debian/tmp3/posix/dudley/src/dudleycpp.os -Ldebian/stage3/lib -L/usr/lib/python3.9/config-3.9-aarch64-linux-gnu -L/usr/lib/aarch64-linux-gnu -L/usr/lib -ldudley -lpaso -lescript -lnetcdf_c++4 -lumfpack -lblas -lamd -lpython3.9 -lboost_python39 -lboost_numpy39 In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -15884,13 +15917,19 @@ from debian/stage3/include/escript/EsysMPI.h:28, from finley/src/Finley.h:32, from finley/src/Assemble.h:27, - from finley/src/Assemble_PDE_System_C.cpp:35: + from finley/src/Assemble_PDE_Single_C.cpp:34: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +Install file: "debian/tmp3/posix/dudley/src/dudleycpp.so" as "debian/stage3/esys/dudley/dudleycpp.so" +g++ -o debian/tmp3/posix/finley/src/Assemble_interpolate.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Assemble_interpolate.cpp +g++ -o debian/tmp3/posix/finley/src/Assemble_jacobians.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Assemble_jacobians.cpp +g++ -o debian/tmp3/posix/finley/src/DomainFactory.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/DomainFactory.cpp +g++ -o debian/tmp3/posix/finley/src/ElementFile.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/ElementFile.cpp +g++ -o debian/tmp3/posix/finley/src/ElementFile_jacobians.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/ElementFile_jacobians.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -15901,16 +15940,13 @@ from debian/stage3/include/escript/EsysMPI.h:28, from finley/src/Finley.h:32, from finley/src/Assemble.h:27, - from finley/src/Assemble_getAssembleParameters.cpp:24: + from finley/src/Assemble_CopyElementData.cpp:25: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/finley/src/DomainFactory.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/DomainFactory.cpp -g++ -o debian/tmp3/posix/finley/src/ElementFile.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/ElementFile.cpp -g++ -o debian/tmp3/posix/finley/src/ElementFile_jacobians.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/ElementFile_jacobians.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -15921,7 +15957,7 @@ from debian/stage3/include/escript/EsysMPI.h:28, from finley/src/Finley.h:32, from finley/src/Assemble.h:27, - from finley/src/Assemble_getNormal.cpp:26: + from finley/src/Assemble_PDE_System_1D.cpp:42: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ @@ -15945,7 +15981,6 @@ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/finley/src/FinleyDomain.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/FinleyDomain.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -15956,13 +15991,14 @@ from debian/stage3/include/escript/EsysMPI.h:28, from finley/src/Finley.h:32, from finley/src/Assemble.h:27, - from finley/src/Assemble_gradient.cpp:26: + from finley/src/Assemble_CopyNodalData.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/finley/src/FinleyDomain.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/FinleyDomain.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -15971,13 +16007,11 @@ from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, from /usr/include/boost/shared_ptr.hpp:17, from debian/stage3/include/escript/EsysMPI.h:28, - from finley/src/Finley.h:32, - from finley/src/Assemble.h:27, - from finley/src/Assemble_integrate.cpp:25: + from debian/stage3/include/finley/Finley.h:32, + from finley/src/finleycpp.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/finley/src/IndexList.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/IndexList.cpp /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ @@ -16015,9 +16049,6 @@ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/finley/src/Mesh_addPoints.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Mesh_addPoints.cpp -g++ -o debian/tmp3/posix/finley/src/Mesh_findMatchingFaces.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Mesh_findMatchingFaces.cpp -g++ -o debian/tmp3/posix/finley/src/Mesh_getPasoPattern.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Mesh_getPasoPattern.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -16036,7 +16067,8 @@ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/finley/src/Mesh_getTrilinosGraph.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Mesh_getTrilinosGraph.cpp +g++ -o debian/tmp3/posix/finley/src/IndexList.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/IndexList.cpp +g++ -o debian/tmp3/posix/finley/src/Mesh_addPoints.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Mesh_addPoints.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -16047,13 +16079,14 @@ from debian/stage3/include/escript/EsysMPI.h:28, from finley/src/Finley.h:32, from finley/src/ElementFile.h:21, - from finley/src/ElementFile_jacobians.cpp:18: + from finley/src/ElementFile.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/finley/src/Mesh_findMatchingFaces.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Mesh_findMatchingFaces.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -16064,14 +16097,14 @@ from debian/stage3/include/escript/EsysMPI.h:28, from finley/src/Finley.h:32, from finley/src/ElementFile.h:21, - from finley/src/ElementFile.cpp:18: + from finley/src/ElementFile_jacobians.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/finley/src/Mesh_glueFaces.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Mesh_glueFaces.cpp +g++ -o debian/tmp3/posix/finley/src/Mesh_getPasoPattern.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Mesh_getPasoPattern.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -16089,6 +16122,11 @@ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/finley/src/Mesh_getTrilinosGraph.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Mesh_getTrilinosGraph.cpp +g++ -o debian/tmp3/posix/finley/src/Mesh_glueFaces.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Mesh_glueFaces.cpp +g++ -o debian/tmp3/posix/finley/src/Mesh_hex20.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Mesh_hex20.cpp +g++ -o debian/tmp3/posix/finley/src/Mesh_hex8.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Mesh_hex8.cpp +g++ -o debian/tmp3/posix/finley/src/Mesh_joinFaces.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Mesh_joinFaces.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -16106,7 +16144,6 @@ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/finley/src/Mesh_hex20.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Mesh_hex20.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -16124,7 +16161,6 @@ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/finley/src/Mesh_hex8.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Mesh_hex8.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -16142,7 +16178,6 @@ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/finley/src/Mesh_joinFaces.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Mesh_joinFaces.cpp g++ -o debian/tmp3/posix/finley/src/Mesh_merge.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Mesh_merge.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, @@ -16172,13 +16207,10 @@ from debian/stage3/include/escript/EsysMPI.h:28, from debian/stage3/include/finley/Finley.h:32, from finley/src/FinleyDomain.h:60, - from finley/src/Mesh_glueFaces.cpp:27: + from finley/src/Mesh_hex20.cpp:29: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ -/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' - 13 | BOOST_HEADER_DEPRECATED("") - | ^~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -16189,16 +16221,16 @@ from debian/stage3/include/escript/EsysMPI.h:28, from debian/stage3/include/finley/Finley.h:32, from finley/src/FinleyDomain.h:60, - from finley/src/Mesh_hex20.cpp:29: + from finley/src/Mesh_glueFaces.cpp:27: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/finley/src/Mesh_read.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Mesh_read.cpp -g++ -o debian/tmp3/posix/finley/src/Mesh_readGmsh.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Mesh_readGmsh.cpp -g++ -o debian/tmp3/posix/finley/src/Mesh_rec4.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Mesh_rec4.cpp +/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' + 13 | BOOST_HEADER_DEPRECATED("") + | ^~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -16209,7 +16241,7 @@ from debian/stage3/include/escript/EsysMPI.h:28, from debian/stage3/include/finley/Finley.h:32, from finley/src/FinleyDomain.h:60, - from finley/src/Mesh_hex8.cpp:30: + from finley/src/Mesh_joinFaces.cpp:27: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ @@ -16226,13 +16258,17 @@ from debian/stage3/include/escript/EsysMPI.h:28, from debian/stage3/include/finley/Finley.h:32, from finley/src/FinleyDomain.h:60, - from finley/src/Mesh_joinFaces.cpp:27: + from finley/src/Mesh_hex8.cpp:30: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/finley/src/Mesh_read.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Mesh_read.cpp +g++ -o debian/tmp3/posix/finley/src/Mesh_readGmsh.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Mesh_readGmsh.cpp +g++ -o debian/tmp3/posix/finley/src/Mesh_rec4.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Mesh_rec4.cpp +g++ -o debian/tmp3/posix/finley/src/Mesh_rec8.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Mesh_rec8.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -16250,7 +16286,9 @@ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/finley/src/Mesh_rec8.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Mesh_rec8.cpp +g++ -o debian/tmp3/posix/finley/src/Mesh_write.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Mesh_write.cpp +g++ -o debian/tmp3/posix/finley/src/NodeFile.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/NodeFile.cpp +g++ -o debian/tmp3/posix/finley/src/Quadrature.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Quadrature.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -16268,8 +16306,7 @@ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/finley/src/Mesh_write.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Mesh_write.cpp -g++ -o debian/tmp3/posix/finley/src/NodeFile.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/NodeFile.cpp +g++ -o debian/tmp3/posix/finley/src/ReferenceElements.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/ReferenceElements.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -16287,7 +16324,6 @@ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/finley/src/Quadrature.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Quadrature.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -16305,6 +16341,20 @@ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/finley/src/ShapeFunctions.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/ShapeFunctions.cpp +g++ -o debian/tmp3/posix/finley/src/Util.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Util.cpp +/usr/bin/python3 scripts/py_comp.py finley/py_src/readers.py debian/tmp3/posix/finley/py/readers.pyc +Install file: "debian/tmp3/posix/finley/py/readers.pyc" as "debian/stage3/esys/finley/readers.pyc" +/usr/bin/python3 scripts/py_comp.py modellib/py_src/__init__.py debian/tmp3/posix/modellib/__init__.pyc +Install file: "debian/tmp3/posix/modellib/__init__.pyc" as "debian/stage3/esys/modellib/__init__.pyc" +/usr/bin/python3 scripts/py_comp.py modellib/py_src/flow.py debian/tmp3/posix/modellib/flow.pyc +Install file: "debian/tmp3/posix/modellib/flow.pyc" as "debian/stage3/esys/modellib/flow.pyc" +/usr/bin/python3 scripts/py_comp.py modellib/py_src/geometry.py debian/tmp3/posix/modellib/geometry.pyc +Install file: "debian/tmp3/posix/modellib/geometry.pyc" as "debian/stage3/esys/modellib/geometry.pyc" +/usr/bin/python3 scripts/py_comp.py modellib/py_src/input.py debian/tmp3/posix/modellib/input.pyc +Install file: "debian/tmp3/posix/modellib/input.pyc" as "debian/stage3/esys/modellib/input.pyc" +/usr/bin/python3 scripts/py_comp.py modellib/py_src/materials.py debian/tmp3/posix/modellib/materials.pyc +/usr/bin/python3 scripts/py_comp.py modellib/py_src/mechanics.py debian/tmp3/posix/modellib/mechanics.pyc In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -16322,9 +16372,18 @@ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/finley/src/ReferenceElements.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/ReferenceElements.cpp -g++ -o debian/tmp3/posix/finley/src/ShapeFunctions.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/ShapeFunctions.cpp -g++ -o debian/tmp3/posix/finley/src/Util.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Util.cpp +Install file: "debian/tmp3/posix/modellib/materials.pyc" as "debian/stage3/esys/modellib/materials.pyc" +/usr/bin/python3 scripts/py_comp.py modellib/py_src/probe.py debian/tmp3/posix/modellib/probe.pyc +Install file: "debian/tmp3/posix/modellib/mechanics.pyc" as "debian/stage3/esys/modellib/mechanics.pyc" +/usr/bin/python3 scripts/py_comp.py modellib/py_src/temperature.py debian/tmp3/posix/modellib/temperature.pyc +Install file: "debian/tmp3/posix/modellib/probe.pyc" as "debian/stage3/esys/modellib/probe.pyc" +/usr/bin/python3 scripts/py_comp.py modellib/py_src/visualization.py debian/tmp3/posix/modellib/visualization.pyc +Install file: "debian/tmp3/posix/modellib/temperature.pyc" as "debian/stage3/esys/modellib/temperature.pyc" +/usr/bin/python3 scripts/py_comp.py pycad/py_src/Triangle.py debian/tmp3/posix/pycad/Triangle.pyc +Install file: "debian/tmp3/posix/modellib/visualization.pyc" as "debian/stage3/esys/modellib/visualization.pyc" +/usr/bin/python3 scripts/py_comp.py pycad/py_src/__init__.py debian/tmp3/posix/pycad/__init__.pyc +Install file: "debian/tmp3/posix/pycad/Triangle.pyc" as "debian/stage3/esys/pycad/Triangle.pyc" +/usr/bin/python3 scripts/py_comp.py pycad/py_src/design.py debian/tmp3/posix/pycad/design.pyc In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -16342,15 +16401,32 @@ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -/usr/bin/python3 scripts/py_comp.py finley/py_src/readers.py debian/tmp3/posix/finley/py/readers.pyc -Install file: "debian/tmp3/posix/finley/py/readers.pyc" as "debian/stage3/esys/finley/readers.pyc" -/usr/bin/python3 scripts/py_comp.py modellib/py_src/__init__.py debian/tmp3/posix/modellib/__init__.pyc -/usr/bin/python3 scripts/py_comp.py modellib/py_src/flow.py debian/tmp3/posix/modellib/flow.pyc -Install file: "debian/tmp3/posix/modellib/__init__.pyc" as "debian/stage3/esys/modellib/__init__.pyc" -/usr/bin/python3 scripts/py_comp.py modellib/py_src/geometry.py debian/tmp3/posix/modellib/geometry.pyc -Install file: "debian/tmp3/posix/modellib/flow.pyc" as "debian/stage3/esys/modellib/flow.pyc" -/usr/bin/python3 scripts/py_comp.py modellib/py_src/input.py debian/tmp3/posix/modellib/input.pyc -Install file: "debian/tmp3/posix/modellib/geometry.pyc" as "debian/stage3/esys/modellib/geometry.pyc" +Install file: "debian/tmp3/posix/pycad/__init__.pyc" as "debian/stage3/esys/pycad/__init__.pyc" +/usr/bin/python3 scripts/py_comp.py pycad/py_src/extras.py debian/tmp3/posix/pycad/extras.pyc +Install file: "debian/tmp3/posix/pycad/design.pyc" as "debian/stage3/esys/pycad/design.pyc" +/usr/bin/python3 scripts/py_comp.py pycad/py_src/gmsh.py debian/tmp3/posix/pycad/gmsh.pyc +Install file: "debian/tmp3/posix/pycad/extras.pyc" as "debian/stage3/esys/pycad/extras.pyc" +/usr/bin/python3 scripts/py_comp.py pycad/py_src/primitives.py debian/tmp3/posix/pycad/primitives.pyc +Install file: "debian/tmp3/posix/pycad/gmsh.pyc" as "debian/stage3/esys/pycad/gmsh.pyc" +/usr/bin/python3 scripts/py_comp.py pycad/py_src/shapes.py debian/tmp3/posix/pycad/shapes.pyc +Install file: "debian/tmp3/posix/pycad/primitives.pyc" as "debian/stage3/esys/pycad/primitives.pyc" +/usr/bin/python3 scripts/py_comp.py pycad/py_src/transformations.py debian/tmp3/posix/pycad/transformations.pyc +Install file: "debian/tmp3/posix/pycad/shapes.pyc" as "debian/stage3/esys/pycad/shapes.pyc" +/usr/bin/python3 scripts/py_comp.py ripley/py_src/MultiResolutionDomain.py debian/tmp3/posix/ripley/py/MultiResolutionDomain.pyc +Install file: "debian/tmp3/posix/pycad/transformations.pyc" as "debian/stage3/esys/pycad/transformations.pyc" +/usr/bin/python3 scripts/py_comp.py ripley/py_src/__init__.py debian/tmp3/posix/ripley/py/__init__.pyc +Install file: "debian/tmp3/posix/ripley/py/MultiResolutionDomain.pyc" as "debian/stage3/esys/ripley/MultiResolutionDomain.pyc" +Install file: "ripley/src/AbstractAssembler.h" as "debian/stage3/include/ripley/AbstractAssembler.h" +Install file: "debian/tmp3/posix/ripley/py/__init__.pyc" as "debian/stage3/esys/ripley/__init__.pyc" +Install file: "ripley/src/Brick.h" as "debian/stage3/include/ripley/Brick.h" +Install file: "ripley/src/MultiBrick.h" as "debian/stage3/include/ripley/MultiBrick.h" +Install file: "ripley/src/MultiRectangle.h" as "debian/stage3/include/ripley/MultiRectangle.h" +Install file: "ripley/src/Rectangle.h" as "debian/stage3/include/ripley/Rectangle.h" +Install file: "ripley/src/domainhelpers.h" as "debian/stage3/include/ripley/domainhelpers.h" +Install file: "ripley/src/RipleyDomain.h" as "debian/stage3/include/ripley/RipleyDomain.h" +Install file: "ripley/src/Ripley.h" as "debian/stage3/include/ripley/Ripley.h" +Install file: "ripley/src/RipleyException.h" as "debian/stage3/include/ripley/RipleyException.h" +Install file: "ripley/src/system_dep.h" as "debian/stage3/include/ripley/system_dep.h" In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -16359,22 +16435,17 @@ from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, from /usr/include/boost/shared_ptr.hpp:17, from debian/stage3/include/escript/EsysMPI.h:28, - from finley/src/Finley.h:32, - from finley/src/NodeFile.h:23, - from finley/src/NodeFile.cpp:18: + from debian/stage3/include/finley/Finley.h:32, + from finley/src/FinleyDomain.h:60, + from finley/src/Mesh_write.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ -/usr/bin/python3 scripts/py_comp.py modellib/py_src/materials.py debian/tmp3/posix/modellib/materials.pyc +g++ -o debian/tmp3/posix/ripley/src/blocktools.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse ripley/src/blocktools.cpp /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -Install file: "debian/tmp3/posix/modellib/input.pyc" as "debian/stage3/esys/modellib/input.pyc" -/usr/bin/python3 scripts/py_comp.py modellib/py_src/mechanics.py debian/tmp3/posix/modellib/mechanics.pyc -Install file: "debian/tmp3/posix/modellib/materials.pyc" as "debian/stage3/esys/modellib/materials.pyc" -/usr/bin/python3 scripts/py_comp.py modellib/py_src/probe.py debian/tmp3/posix/modellib/probe.pyc -Install file: "debian/tmp3/posix/modellib/mechanics.pyc" as "debian/stage3/esys/modellib/mechanics.pyc" -/usr/bin/python3 scripts/py_comp.py modellib/py_src/temperature.py debian/tmp3/posix/modellib/temperature.pyc +g++ -o debian/tmp3/posix/ripley/src/ripleycpp.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse ripley/src/ripleycpp.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -16383,65 +16454,24 @@ from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, from /usr/include/boost/shared_ptr.hpp:17, from debian/stage3/include/escript/EsysMPI.h:28, - from debian/stage3/include/finley/Finley.h:32, - from finley/src/FinleyDomain.h:60, - from finley/src/Mesh_write.cpp:18: + from finley/src/Finley.h:32, + from finley/src/NodeFile.h:23, + from finley/src/NodeFile.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -Install file: "debian/tmp3/posix/modellib/probe.pyc" as "debian/stage3/esys/modellib/probe.pyc" -/usr/bin/python3 scripts/py_comp.py modellib/py_src/visualization.py debian/tmp3/posix/modellib/visualization.pyc -Install file: "debian/tmp3/posix/modellib/temperature.pyc" as "debian/stage3/esys/modellib/temperature.pyc" -/usr/bin/python3 scripts/py_comp.py pycad/py_src/Triangle.py debian/tmp3/posix/pycad/Triangle.pyc -Install file: "debian/tmp3/posix/modellib/visualization.pyc" as "debian/stage3/esys/modellib/visualization.pyc" -/usr/bin/python3 scripts/py_comp.py pycad/py_src/__init__.py debian/tmp3/posix/pycad/__init__.pyc -/usr/bin/python3 scripts/py_comp.py pycad/py_src/design.py debian/tmp3/posix/pycad/design.pyc -Install file: "debian/tmp3/posix/pycad/Triangle.pyc" as "debian/stage3/esys/pycad/Triangle.pyc" -/usr/bin/python3 scripts/py_comp.py pycad/py_src/extras.py debian/tmp3/posix/pycad/extras.pyc -Install file: "debian/tmp3/posix/pycad/__init__.pyc" as "debian/stage3/esys/pycad/__init__.pyc" -/usr/bin/python3 scripts/py_comp.py pycad/py_src/gmsh.py debian/tmp3/posix/pycad/gmsh.pyc -Install file: "debian/tmp3/posix/pycad/design.pyc" as "debian/stage3/esys/pycad/design.pyc" -/usr/bin/python3 scripts/py_comp.py pycad/py_src/primitives.py debian/tmp3/posix/pycad/primitives.pyc -Install file: "debian/tmp3/posix/pycad/extras.pyc" as "debian/stage3/esys/pycad/extras.pyc" -/usr/bin/python3 scripts/py_comp.py pycad/py_src/shapes.py debian/tmp3/posix/pycad/shapes.pyc -/usr/bin/python3 scripts/py_comp.py pycad/py_src/transformations.py debian/tmp3/posix/pycad/transformations.pyc -Install file: "debian/tmp3/posix/pycad/shapes.pyc" as "debian/stage3/esys/pycad/shapes.pyc" -/usr/bin/python3 scripts/py_comp.py ripley/py_src/MultiResolutionDomain.py debian/tmp3/posix/ripley/py/MultiResolutionDomain.pyc -Install file: "debian/tmp3/posix/pycad/gmsh.pyc" as "debian/stage3/esys/pycad/gmsh.pyc" -Install file: "debian/tmp3/posix/pycad/primitives.pyc" as "debian/stage3/esys/pycad/primitives.pyc" -Install file: "debian/tmp3/posix/pycad/transformations.pyc" as "debian/stage3/esys/pycad/transformations.pyc" -Install file: "debian/tmp3/posix/ripley/py/MultiResolutionDomain.pyc" as "debian/stage3/esys/ripley/MultiResolutionDomain.pyc" -/usr/bin/python3 scripts/py_comp.py ripley/py_src/__init__.py debian/tmp3/posix/ripley/py/__init__.pyc -Install file: "ripley/src/AbstractAssembler.h" as "debian/stage3/include/ripley/AbstractAssembler.h" -Install file: "ripley/src/Brick.h" as "debian/stage3/include/ripley/Brick.h" -Install file: "ripley/src/MultiBrick.h" as "debian/stage3/include/ripley/MultiBrick.h" -Install file: "debian/tmp3/posix/ripley/py/__init__.pyc" as "debian/stage3/esys/ripley/__init__.pyc" -Install file: "ripley/src/MultiRectangle.h" as "debian/stage3/include/ripley/MultiRectangle.h" -Install file: "ripley/src/Rectangle.h" as "debian/stage3/include/ripley/Rectangle.h" -g++ -o debian/tmp3/posix/ripley/src/blocktools.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse ripley/src/blocktools.cpp g++ -o debian/tmp3/posix/ripley/src/blocktools2.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse ripley/src/blocktools2.cpp Install file: "escriptcore/src/FileWriter.h" as "debian/stage3/include/escript/FileWriter.h" -Install file: "ripley/src/domainhelpers.h" as "debian/stage3/include/ripley/domainhelpers.h" -Install file: "ripley/src/RipleyDomain.h" as "debian/stage3/include/ripley/RipleyDomain.h" Install file: "ripley/src/DefaultAssembler3D.h" as "debian/stage3/include/ripley/DefaultAssembler3D.h" -Install file: "ripley/src/Ripley.h" as "debian/stage3/include/ripley/Ripley.h" -Install file: "ripley/src/RipleyException.h" as "debian/stage3/include/ripley/RipleyException.h" -Install file: "ripley/src/system_dep.h" as "debian/stage3/include/ripley/system_dep.h" Install file: "ripley/src/LameAssembler3D.h" as "debian/stage3/include/ripley/LameAssembler3D.h" -g++ -o debian/tmp3/posix/ripley/src/ripleycpp.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse ripley/src/ripleycpp.cpp Install file: "ripley/src/WaveAssembler3D.h" as "debian/stage3/include/ripley/WaveAssembler3D.h" Install file: "ripley/src/blocktools.h" as "debian/stage3/include/ripley/blocktools.h" g++ -o debian/tmp3/posix/ripley/src/Brick.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse ripley/src/Brick.cpp Install file: "ripley/src/DefaultAssembler2D.h" as "debian/stage3/include/ripley/DefaultAssembler2D.h" g++ -o debian/tmp3/posix/ripley/src/DefaultAssembler2D.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse ripley/src/DefaultAssembler2D.cpp -g++ -o debian/tmp3/posix/ripley/src/DefaultAssembler3D.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse ripley/src/DefaultAssembler3D.cpp -g++ -o debian/tmp3/posix/ripley/src/domainhelpers.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse ripley/src/domainhelpers.cpp -Install file: "ripley/src/LameAssembler2D.h" as "debian/stage3/include/ripley/LameAssembler2D.h" -g++ -o debian/tmp3/posix/ripley/src/LameAssembler3D.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse ripley/src/LameAssembler3D.cpp -g++ -o debian/tmp3/posix/ripley/src/LameAssembler2D.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse ripley/src/LameAssembler2D.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -16456,10 +16486,14 @@ /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/ripley/src/DefaultAssembler3D.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse ripley/src/DefaultAssembler3D.cpp /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/ripley/src/MultiBrick.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse ripley/src/MultiBrick.cpp +g++ -o debian/tmp3/posix/ripley/src/domainhelpers.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse ripley/src/domainhelpers.cpp +Install file: "ripley/src/LameAssembler2D.h" as "debian/stage3/include/ripley/LameAssembler2D.h" +g++ -o debian/tmp3/posix/ripley/src/LameAssembler2D.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse ripley/src/LameAssembler2D.cpp +g++ -o debian/tmp3/posix/ripley/src/LameAssembler3D.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse ripley/src/LameAssembler3D.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -16479,8 +16513,10 @@ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/ripley/src/MultiBrick.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse ripley/src/MultiBrick.cpp g++ -o debian/tmp3/posix/ripley/src/MultiRectangle.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse ripley/src/MultiRectangle.cpp Install file: "ripley/src/WaveAssembler2D.h" as "debian/stage3/include/ripley/WaveAssembler2D.h" +g++ -o debian/tmp3/posix/ripley/src/Rectangle.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse ripley/src/Rectangle.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -16499,8 +16535,6 @@ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/ripley/src/Rectangle.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse ripley/src/Rectangle.cpp -g++ -o debian/tmp3/posix/finley/src/libfinley.so -Wl,-z,relro -Wl,-z,now -fopenmp -shared debian/tmp3/posix/finley/src/Assemble_AverageElementData.os debian/tmp3/posix/finley/src/Assemble_CopyElementData.os debian/tmp3/posix/finley/src/Assemble_CopyNodalData.os debian/tmp3/posix/finley/src/Assemble_LumpedSystem.os debian/tmp3/posix/finley/src/Assemble_NodeCoordinates.os debian/tmp3/posix/finley/src/Assemble_PDE.os debian/tmp3/posix/finley/src/Assemble_PDE_Points.os debian/tmp3/posix/finley/src/Assemble_PDE_Single_1D.os debian/tmp3/posix/finley/src/Assemble_PDE_Single_2D.os debian/tmp3/posix/finley/src/Assemble_PDE_Single_3D.os debian/tmp3/posix/finley/src/Assemble_PDE_Single_C.os debian/tmp3/posix/finley/src/Assemble_PDE_System_1D.os debian/tmp3/posix/finley/src/Assemble_PDE_System_2D.os debian/tmp3/posix/finley/src/Assemble_PDE_System_3D.os debian/tmp3/posix/finley/src/Assemble_PDE_System_C.os debian/tmp3/posix/finley/src/Assemble_addToSystemMatrix.os debian/tmp3/posix/finley/src/Assemble_getAssembleParameters.os debian/tmp3/posix/finley/src/Assemble_getNormal.os debian/tmp3/posix/finley/src/Assemble_getSize.os debian/tmp3/posix/finley/src/Assemble_gradient.os debian/tmp3/posix/finley/src/Assemble_integrate.os debian/tmp3/posix/finley/src/Assemble_interpolate.os debian/tmp3/posix/finley/src/Assemble_jacobians.os debian/tmp3/posix/finley/src/DomainFactory.os debian/tmp3/posix/finley/src/ElementFile.os debian/tmp3/posix/finley/src/ElementFile_jacobians.os debian/tmp3/posix/finley/src/FinleyDomain.os debian/tmp3/posix/finley/src/IndexList.os debian/tmp3/posix/finley/src/Mesh_addPoints.os debian/tmp3/posix/finley/src/Mesh_findMatchingFaces.os debian/tmp3/posix/finley/src/Mesh_getPasoPattern.os debian/tmp3/posix/finley/src/Mesh_getTrilinosGraph.os debian/tmp3/posix/finley/src/Mesh_glueFaces.os debian/tmp3/posix/finley/src/Mesh_hex20.os debian/tmp3/posix/finley/src/Mesh_hex8.os debian/tmp3/posix/finley/src/Mesh_joinFaces.os debian/tmp3/posix/finley/src/Mesh_merge.os debian/tmp3/posix/finley/src/Mesh_optimizeDOFDistribution.os debian/tmp3/posix/finley/src/Mesh_read.os debian/tmp3/posix/finley/src/Mesh_readGmsh.os debian/tmp3/posix/finley/src/Mesh_rec4.os debian/tmp3/posix/finley/src/Mesh_rec8.os debian/tmp3/posix/finley/src/Mesh_write.os debian/tmp3/posix/finley/src/NodeFile.os debian/tmp3/posix/finley/src/Quadrature.os debian/tmp3/posix/finley/src/ReferenceElements.os debian/tmp3/posix/finley/src/ShapeFunctions.os debian/tmp3/posix/finley/src/Util.os -Ldebian/stage3/lib -L/usr/lib/python3.9/config-3.9-aarch64-linux-gnu -L/usr/lib/aarch64-linux-gnu -L/usr/lib -lpaso -lescript -lnetcdf_c++4 -lumfpack -lblas -lamd -lpython3.9 -lboost_python39 -lboost_numpy39 In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -16520,6 +16554,7 @@ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/finley/src/libfinley.so -Wl,-z,relro -Wl,-z,now -fopenmp -shared debian/tmp3/posix/finley/src/Assemble_AverageElementData.os debian/tmp3/posix/finley/src/Assemble_CopyElementData.os debian/tmp3/posix/finley/src/Assemble_CopyNodalData.os debian/tmp3/posix/finley/src/Assemble_LumpedSystem.os debian/tmp3/posix/finley/src/Assemble_NodeCoordinates.os debian/tmp3/posix/finley/src/Assemble_PDE.os debian/tmp3/posix/finley/src/Assemble_PDE_Points.os debian/tmp3/posix/finley/src/Assemble_PDE_Single_1D.os debian/tmp3/posix/finley/src/Assemble_PDE_Single_2D.os debian/tmp3/posix/finley/src/Assemble_PDE_Single_3D.os debian/tmp3/posix/finley/src/Assemble_PDE_Single_C.os debian/tmp3/posix/finley/src/Assemble_PDE_System_1D.os debian/tmp3/posix/finley/src/Assemble_PDE_System_2D.os debian/tmp3/posix/finley/src/Assemble_PDE_System_3D.os debian/tmp3/posix/finley/src/Assemble_PDE_System_C.os debian/tmp3/posix/finley/src/Assemble_addToSystemMatrix.os debian/tmp3/posix/finley/src/Assemble_getAssembleParameters.os debian/tmp3/posix/finley/src/Assemble_getNormal.os debian/tmp3/posix/finley/src/Assemble_getSize.os debian/tmp3/posix/finley/src/Assemble_gradient.os debian/tmp3/posix/finley/src/Assemble_integrate.os debian/tmp3/posix/finley/src/Assemble_interpolate.os debian/tmp3/posix/finley/src/Assemble_jacobians.os debian/tmp3/posix/finley/src/DomainFactory.os debian/tmp3/posix/finley/src/ElementFile.os debian/tmp3/posix/finley/src/ElementFile_jacobians.os debian/tmp3/posix/finley/src/FinleyDomain.os debian/tmp3/posix/finley/src/IndexList.os debian/tmp3/posix/finley/src/Mesh_addPoints.os debian/tmp3/posix/finley/src/Mesh_findMatchingFaces.os debian/tmp3/posix/finley/src/Mesh_getPasoPattern.os debian/tmp3/posix/finley/src/Mesh_getTrilinosGraph.os debian/tmp3/posix/finley/src/Mesh_glueFaces.os debian/tmp3/posix/finley/src/Mesh_hex20.os debian/tmp3/posix/finley/src/Mesh_hex8.os debian/tmp3/posix/finley/src/Mesh_joinFaces.os debian/tmp3/posix/finley/src/Mesh_merge.os debian/tmp3/posix/finley/src/Mesh_optimizeDOFDistribution.os debian/tmp3/posix/finley/src/Mesh_read.os debian/tmp3/posix/finley/src/Mesh_readGmsh.os debian/tmp3/posix/finley/src/Mesh_rec4.os debian/tmp3/posix/finley/src/Mesh_rec8.os debian/tmp3/posix/finley/src/Mesh_write.os debian/tmp3/posix/finley/src/NodeFile.os debian/tmp3/posix/finley/src/Quadrature.os debian/tmp3/posix/finley/src/ReferenceElements.os debian/tmp3/posix/finley/src/ShapeFunctions.os debian/tmp3/posix/finley/src/Util.os -Ldebian/stage3/lib -L/usr/lib/python3.9/config-3.9-aarch64-linux-gnu -L/usr/lib/aarch64-linux-gnu -L/usr/lib -lpaso -lescript -lnetcdf_c++4 -lumfpack -lblas -lamd -lpython3.9 -lboost_python39 -lboost_numpy39 In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -16529,15 +16564,16 @@ from /usr/include/boost/shared_ptr.hpp:17, from debian/stage3/include/escript/EsysMPI.h:28, from debian/stage3/include/ripley/Ripley.h:28, - from debian/stage3/include/ripley/domainhelpers.h:20, - from ripley/src/domainhelpers.cpp:18: + from debian/stage3/include/ripley/RipleyDomain.h:21, + from debian/stage3/include/ripley/Brick.h:26, + from debian/stage3/include/ripley/DefaultAssembler3D.h:20, + from ripley/src/DefaultAssembler3D.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -Install file: "debian/tmp3/posix/finley/src/libfinley.so" as "debian/stage3/lib/libfinley.so" In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -16547,17 +16583,14 @@ from /usr/include/boost/shared_ptr.hpp:17, from debian/stage3/include/escript/EsysMPI.h:28, from debian/stage3/include/ripley/Ripley.h:28, - from debian/stage3/include/ripley/RipleyDomain.h:21, - from debian/stage3/include/ripley/Brick.h:26, - from debian/stage3/include/ripley/DefaultAssembler3D.h:20, - from ripley/src/DefaultAssembler3D.cpp:18: + from debian/stage3/include/ripley/domainhelpers.h:20, + from ripley/src/domainhelpers.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/finley/src/finleycpp.so -Wl,-z,relro -Wl,-z,now -fopenmp -shared debian/tmp3/posix/finley/src/finleycpp.os -Ldebian/stage3/lib -L/usr/lib/python3.9/config-3.9-aarch64-linux-gnu -L/usr/lib/aarch64-linux-gnu -L/usr/lib -lfinley -lpaso -lescript -lnetcdf_c++4 -lumfpack -lblas -lamd -lpython3.9 -lboost_python39 -lboost_numpy39 In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -16577,6 +16610,10 @@ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +Install file: "debian/tmp3/posix/finley/src/libfinley.so" as "debian/stage3/lib/libfinley.so" +g++ -o debian/tmp3/posix/finley/src/finleycpp.so -Wl,-z,relro -Wl,-z,now -fopenmp -shared debian/tmp3/posix/finley/src/finleycpp.os -Ldebian/stage3/lib -L/usr/lib/python3.9/config-3.9-aarch64-linux-gnu -L/usr/lib/aarch64-linux-gnu -L/usr/lib -lfinley -lpaso -lescript -lnetcdf_c++4 -lumfpack -lblas -lamd -lpython3.9 -lboost_python39 -lboost_numpy39 +Install file: "debian/tmp3/posix/finley/src/finleycpp.so" as "debian/stage3/esys/finley/finleycpp.so" +g++ -o debian/tmp3/posix/ripley/src/RipleyDomain.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse ripley/src/RipleyDomain.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -16596,8 +16633,6 @@ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -Install file: "debian/tmp3/posix/finley/src/finleycpp.so" as "debian/stage3/esys/finley/finleycpp.so" -g++ -o debian/tmp3/posix/ripley/src/RipleyDomain.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse ripley/src/RipleyDomain.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -16627,9 +16662,7 @@ from debian/stage3/include/escript/EsysMPI.h:28, from debian/stage3/include/ripley/Ripley.h:28, from debian/stage3/include/ripley/RipleyDomain.h:21, - from debian/stage3/include/ripley/Rectangle.h:26, - from debian/stage3/include/ripley/MultiRectangle.h:21, - from ripley/src/MultiRectangle.cpp:18: + from ripley/src/RipleyDomain.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ @@ -16664,7 +16697,9 @@ from debian/stage3/include/escript/EsysMPI.h:28, from debian/stage3/include/ripley/Ripley.h:28, from debian/stage3/include/ripley/RipleyDomain.h:21, - from ripley/src/RipleyDomain.cpp:18: + from debian/stage3/include/ripley/Rectangle.h:26, + from debian/stage3/include/ripley/MultiRectangle.h:21, + from ripley/src/MultiRectangle.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ @@ -16683,9 +16718,9 @@ from debian/stage3/include/escript/EsysMPI.h:28, from debian/stage3/include/ripley/Ripley.h:28, from debian/stage3/include/ripley/RipleyDomain.h:21, - from debian/stage3/include/ripley/Brick.h:26, - from debian/stage3/include/ripley/WaveAssembler3D.h:20, - from ripley/src/WaveAssembler3D.cpp:18: + from debian/stage3/include/ripley/Rectangle.h:26, + from debian/stage3/include/ripley/WaveAssembler2D.h:20, + from ripley/src/WaveAssembler2D.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ @@ -16702,9 +16737,9 @@ from debian/stage3/include/escript/EsysMPI.h:28, from debian/stage3/include/ripley/Ripley.h:28, from debian/stage3/include/ripley/RipleyDomain.h:21, - from debian/stage3/include/ripley/Rectangle.h:26, - from debian/stage3/include/ripley/WaveAssembler2D.h:20, - from ripley/src/WaveAssembler2D.cpp:18: + from debian/stage3/include/ripley/Brick.h:26, + from debian/stage3/include/ripley/WaveAssembler3D.h:20, + from ripley/src/WaveAssembler3D.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ @@ -16739,7 +16774,7 @@ from debian/stage3/include/speckley/Speckley.h:28, from debian/stage3/include/speckley/domainhelpers.h:20, from debian/stage3/include/speckley/AbstractAssembler.h:21, - from speckley/src/speckleycpp.cpp:18: + from speckley/src/AbstractAssembler.cpp:17: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ @@ -16757,7 +16792,7 @@ from debian/stage3/include/speckley/Speckley.h:28, from debian/stage3/include/speckley/domainhelpers.h:20, from debian/stage3/include/speckley/AbstractAssembler.h:21, - from speckley/src/AbstractAssembler.cpp:17: + from speckley/src/speckleycpp.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ @@ -16782,6 +16817,7 @@ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/speckley/src/BrickIntegrals.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_RIPLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse speckley/src/BrickIntegrals.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -16800,10 +16836,7 @@ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/speckley/src/BrickIntegrals.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_RIPLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse speckley/src/BrickIntegrals.cpp g++ -o debian/tmp3/posix/speckley/src/BrickReductions.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_RIPLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse speckley/src/BrickReductions.cpp -Install file: "speckley/src/DefaultAssembler2D.h" as "debian/stage3/include/speckley/DefaultAssembler2D.h" -g++ -o debian/tmp3/posix/speckley/src/DefaultAssembler2D.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_RIPLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse speckley/src/DefaultAssembler2D.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -16822,6 +16855,8 @@ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +Install file: "speckley/src/DefaultAssembler2D.h" as "debian/stage3/include/speckley/DefaultAssembler2D.h" +g++ -o debian/tmp3/posix/speckley/src/DefaultAssembler2D.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_RIPLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse speckley/src/DefaultAssembler2D.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -16840,6 +16875,10 @@ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/speckley/src/DefaultAssembler3D.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_RIPLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse speckley/src/DefaultAssembler3D.cpp +g++ -o debian/tmp3/posix/speckley/src/domainhelpers.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_RIPLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse speckley/src/domainhelpers.cpp +Install file: "speckley/src/WaveAssembler2D.h" as "debian/stage3/include/speckley/WaveAssembler2D.h" +g++ -o debian/tmp3/posix/speckley/src/Rectangle.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_RIPLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse speckley/src/Rectangle.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -16859,12 +16898,6 @@ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/speckley/src/DefaultAssembler3D.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_RIPLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse speckley/src/DefaultAssembler3D.cpp -g++ -o debian/tmp3/posix/speckley/src/domainhelpers.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_RIPLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse speckley/src/domainhelpers.cpp -Install file: "speckley/src/WaveAssembler2D.h" as "debian/stage3/include/speckley/WaveAssembler2D.h" -g++ -o debian/tmp3/posix/speckley/src/Rectangle.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_RIPLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse speckley/src/Rectangle.cpp -g++ -o debian/tmp3/posix/speckley/src/RectangleGradients.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_RIPLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse speckley/src/RectangleGradients.cpp -g++ -o debian/tmp3/posix/speckley/src/RectangleIntegrals.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_RIPLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse speckley/src/RectangleIntegrals.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -16874,15 +16907,17 @@ from /usr/include/boost/shared_ptr.hpp:17, from debian/stage3/include/escript/EsysMPI.h:28, from debian/stage3/include/speckley/Speckley.h:28, - from debian/stage3/include/speckley/domainhelpers.h:20, - from speckley/src/domainhelpers.cpp:18: + from debian/stage3/include/speckley/SpeckleyDomain.h:21, + from debian/stage3/include/speckley/Rectangle.h:21, + from speckley/src/Rectangle.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/speckley/src/RectangleReductions.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_RIPLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse speckley/src/RectangleReductions.cpp +g++ -o debian/tmp3/posix/speckley/src/RectangleGradients.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_RIPLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse speckley/src/RectangleGradients.cpp +g++ -o debian/tmp3/posix/speckley/src/RectangleIntegrals.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_RIPLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse speckley/src/RectangleIntegrals.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -16892,16 +16927,14 @@ from /usr/include/boost/shared_ptr.hpp:17, from debian/stage3/include/escript/EsysMPI.h:28, from debian/stage3/include/speckley/Speckley.h:28, - from debian/stage3/include/speckley/SpeckleyDomain.h:21, - from debian/stage3/include/speckley/Rectangle.h:21, - from speckley/src/Rectangle.cpp:18: + from debian/stage3/include/speckley/DefaultAssembler3D.h:20, + from speckley/src/DefaultAssembler3D.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/speckley/src/SpeckleyDomain.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_RIPLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse speckley/src/SpeckleyDomain.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -16911,14 +16944,17 @@ from /usr/include/boost/shared_ptr.hpp:17, from debian/stage3/include/escript/EsysMPI.h:28, from debian/stage3/include/speckley/Speckley.h:28, - from debian/stage3/include/speckley/DefaultAssembler3D.h:20, - from speckley/src/DefaultAssembler3D.cpp:18: + from debian/stage3/include/speckley/domainhelpers.h:20, + from speckley/src/domainhelpers.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/speckley/src/RectangleReductions.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_RIPLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse speckley/src/RectangleReductions.cpp +g++ -o debian/tmp3/posix/speckley/src/SpeckleyDomain.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_RIPLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse speckley/src/SpeckleyDomain.cpp +g++ -o debian/tmp3/posix/speckley/src/WaveAssembler2D.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_RIPLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse speckley/src/WaveAssembler2D.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -16955,12 +16991,7 @@ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/speckley/src/WaveAssembler2D.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_RIPLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse speckley/src/WaveAssembler2D.cpp -g++ -o debian/tmp3/posix/escriptcore/src/escriptcpp.so -Wl,-z,relro -Wl,-z,now -fopenmp -shared debian/tmp3/posix/escriptcore/src/escriptcpp.os -Ldebian/stage3/lib -L/usr/lib/python3.9/config-3.9-aarch64-linux-gnu -L/usr/lib/aarch64-linux-gnu -L/usr/lib -lescript -lpython3.9 -lboost_python39 -lboost_numpy39 g++ -o debian/tmp3/posix/speckley/src/WaveAssembler3D.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_RIPLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse speckley/src/WaveAssembler3D.cpp -Install file: "debian/tmp3/posix/escriptcore/src/escriptcpp.so" as "debian/stage3/esys/escriptcore/escriptcpp.so" -Install file: "speckley/src/lagrange_functions.h" as "debian/stage3/include/speckley/lagrange_functions.h" -g++ -o debian/tmp3/posix/speckley/src/CrossDomainCoupler.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_RIPLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse speckley/src/CrossDomainCoupler.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -16979,25 +17010,6 @@ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -Install file: "weipa/src/DataVar.h" as "debian/stage3/include/weipa/DataVar.h" -Install file: "weipa/src/DomainChunk.h" as "debian/stage3/include/weipa/DomainChunk.h" -Install file: "weipa/src/ElementData.h" as "debian/stage3/include/weipa/ElementData.h" -Install file: "weipa/src/EscriptDataset.h" as "debian/stage3/include/weipa/EscriptDataset.h" -Install file: "weipa/src/NodeData.h" as "debian/stage3/include/weipa/NodeData.h" -Install file: "weipa/src/VisItControl.h" as "debian/stage3/include/weipa/VisItControl.h" -Install file: "weipa/src/vtkCellType.h" as "debian/stage3/include/weipa/vtkCellType.h" -Install file: "weipa/src/WeipaException.h" as "debian/stage3/include/weipa/WeipaException.h" -Install file: "weipa/src/weipa.h" as "debian/stage3/include/weipa/weipa.h" -Install file: "weipa/src/FinleyDomain.h" as "debian/stage3/include/weipa/FinleyDomain.h" -Install file: "weipa/src/FinleyElements.h" as "debian/stage3/include/weipa/FinleyElements.h" -Install file: "weipa/src/FinleyNodes.h" as "debian/stage3/include/weipa/FinleyNodes.h" -Install file: "weipa/src/RipleyDomain.h" as "debian/stage3/include/weipa/RipleyDomain.h" -Install file: "weipa/src/RipleyElements.h" as "debian/stage3/include/weipa/RipleyElements.h" -Install file: "weipa/src/RipleyNodes.h" as "debian/stage3/include/weipa/RipleyNodes.h" -Install file: "weipa/src/SpeckleyDomain.h" as "debian/stage3/include/weipa/SpeckleyDomain.h" -Install file: "weipa/src/SpeckleyElements.h" as "debian/stage3/include/weipa/SpeckleyElements.h" -Install file: "weipa/src/SpeckleyNodes.h" as "debian/stage3/include/weipa/SpeckleyNodes.h" -g++ -o debian/tmp3/posix/weipa/src/DataVar.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_DUDLEY -DUSE_FINLEY -DUSE_RIPLEY -DUSE_SPECKLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse weipa/src/DataVar.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -17015,6 +17027,8 @@ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +Install file: "speckley/src/lagrange_functions.h" as "debian/stage3/include/speckley/lagrange_functions.h" +g++ -o debian/tmp3/posix/speckley/src/CrossDomainCoupler.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_RIPLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse speckley/src/CrossDomainCoupler.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -17024,14 +17038,36 @@ from /usr/include/boost/shared_ptr.hpp:17, from debian/stage3/include/escript/EsysMPI.h:28, from debian/stage3/include/speckley/Speckley.h:28, - from debian/stage3/include/speckley/WaveAssembler3D.h:20, - from speckley/src/WaveAssembler3D.cpp:18: + from debian/stage3/include/speckley/SpeckleyDomain.h:21, + from debian/stage3/include/speckley/Rectangle.h:21, + from debian/stage3/include/speckley/WaveAssembler2D.h:20, + from speckley/src/WaveAssembler2D.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +Install file: "weipa/src/DataVar.h" as "debian/stage3/include/weipa/DataVar.h" +Install file: "weipa/src/DomainChunk.h" as "debian/stage3/include/weipa/DomainChunk.h" +Install file: "weipa/src/ElementData.h" as "debian/stage3/include/weipa/ElementData.h" +Install file: "weipa/src/EscriptDataset.h" as "debian/stage3/include/weipa/EscriptDataset.h" +Install file: "weipa/src/NodeData.h" as "debian/stage3/include/weipa/NodeData.h" +Install file: "weipa/src/VisItControl.h" as "debian/stage3/include/weipa/VisItControl.h" +Install file: "weipa/src/vtkCellType.h" as "debian/stage3/include/weipa/vtkCellType.h" +Install file: "weipa/src/WeipaException.h" as "debian/stage3/include/weipa/WeipaException.h" +Install file: "weipa/src/weipa.h" as "debian/stage3/include/weipa/weipa.h" +Install file: "weipa/src/FinleyDomain.h" as "debian/stage3/include/weipa/FinleyDomain.h" +Install file: "weipa/src/FinleyElements.h" as "debian/stage3/include/weipa/FinleyElements.h" +Install file: "weipa/src/FinleyNodes.h" as "debian/stage3/include/weipa/FinleyNodes.h" +Install file: "weipa/src/RipleyDomain.h" as "debian/stage3/include/weipa/RipleyDomain.h" +Install file: "weipa/src/RipleyElements.h" as "debian/stage3/include/weipa/RipleyElements.h" +Install file: "weipa/src/RipleyNodes.h" as "debian/stage3/include/weipa/RipleyNodes.h" +Install file: "weipa/src/SpeckleyDomain.h" as "debian/stage3/include/weipa/SpeckleyDomain.h" +Install file: "weipa/src/SpeckleyElements.h" as "debian/stage3/include/weipa/SpeckleyElements.h" +Install file: "weipa/src/SpeckleyNodes.h" as "debian/stage3/include/weipa/SpeckleyNodes.h" +g++ -o debian/tmp3/posix/weipa/src/DataVar.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_DUDLEY -DUSE_FINLEY -DUSE_RIPLEY -DUSE_SPECKLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse weipa/src/DataVar.cpp +g++ -o debian/tmp3/posix/weipa/src/EscriptDataset.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_DUDLEY -DUSE_FINLEY -DUSE_RIPLEY -DUSE_SPECKLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse weipa/src/EscriptDataset.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -17041,19 +17077,21 @@ from /usr/include/boost/shared_ptr.hpp:17, from debian/stage3/include/escript/EsysMPI.h:28, from debian/stage3/include/speckley/Speckley.h:28, - from debian/stage3/include/speckley/SpeckleyDomain.h:21, - from debian/stage3/include/speckley/Rectangle.h:21, - from debian/stage3/include/speckley/WaveAssembler2D.h:20, - from speckley/src/WaveAssembler2D.cpp:18: + from debian/stage3/include/speckley/WaveAssembler3D.h:20, + from speckley/src/WaveAssembler3D.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/weipa/src/EscriptDataset.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_DUDLEY -DUSE_FINLEY -DUSE_RIPLEY -DUSE_SPECKLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse weipa/src/EscriptDataset.cpp +g++ -o debian/tmp3/posix/escriptcore/src/escriptcpp.so -Wl,-z,relro -Wl,-z,now -fopenmp -shared debian/tmp3/posix/escriptcore/src/escriptcpp.os -Ldebian/stage3/lib -L/usr/lib/python3.9/config-3.9-aarch64-linux-gnu -L/usr/lib/aarch64-linux-gnu -L/usr/lib -lescript -lpython3.9 -lboost_python39 -lboost_numpy39 +Install file: "debian/tmp3/posix/escriptcore/src/escriptcpp.so" as "debian/stage3/esys/escriptcore/escriptcpp.so" g++ -o debian/tmp3/posix/weipa/src/FinleyDomain.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_DUDLEY -DUSE_FINLEY -DUSE_RIPLEY -DUSE_SPECKLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse weipa/src/FinleyDomain.cpp g++ -o debian/tmp3/posix/weipa/src/FinleyElements.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_DUDLEY -DUSE_FINLEY -DUSE_RIPLEY -DUSE_SPECKLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse weipa/src/FinleyElements.cpp +g++ -o debian/tmp3/posix/weipa/src/FinleyNodes.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_DUDLEY -DUSE_FINLEY -DUSE_RIPLEY -DUSE_SPECKLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse weipa/src/FinleyNodes.cpp +g++ -o debian/tmp3/posix/weipa/src/RipleyDomain.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_DUDLEY -DUSE_FINLEY -DUSE_RIPLEY -DUSE_SPECKLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse weipa/src/RipleyDomain.cpp +g++ -o debian/tmp3/posix/weipa/src/RipleyElements.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_DUDLEY -DUSE_FINLEY -DUSE_RIPLEY -DUSE_SPECKLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse weipa/src/RipleyElements.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -17073,7 +17111,6 @@ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/weipa/src/FinleyNodes.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_DUDLEY -DUSE_FINLEY -DUSE_RIPLEY -DUSE_SPECKLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse weipa/src/FinleyNodes.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -17091,8 +17128,6 @@ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/weipa/src/RipleyDomain.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_DUDLEY -DUSE_FINLEY -DUSE_RIPLEY -DUSE_SPECKLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse weipa/src/RipleyDomain.cpp -g++ -o debian/tmp3/posix/weipa/src/RipleyElements.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_DUDLEY -DUSE_FINLEY -DUSE_RIPLEY -DUSE_SPECKLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse weipa/src/RipleyElements.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -17109,6 +17144,7 @@ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/weipa/src/RipleyNodes.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_DUDLEY -DUSE_FINLEY -DUSE_RIPLEY -DUSE_SPECKLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse weipa/src/RipleyNodes.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -17117,16 +17153,16 @@ from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, from /usr/include/boost/shared_ptr.hpp:17, from debian/stage3/include/weipa/weipa.h:28, - from debian/stage3/include/weipa/DomainChunk.h:21, - from debian/stage3/include/weipa/FinleyDomain.h:21, - from weipa/src/FinleyDomain.cpp:18: + from debian/stage3/include/weipa/ElementData.h:21, + from debian/stage3/include/weipa/FinleyElements.h:21, + from weipa/src/FinleyElements.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/weipa/src/RipleyNodes.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_DUDLEY -DUSE_FINLEY -DUSE_RIPLEY -DUSE_SPECKLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse weipa/src/RipleyNodes.cpp +g++ -o debian/tmp3/posix/weipa/src/SpeckleyDomain.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_DUDLEY -DUSE_FINLEY -DUSE_RIPLEY -DUSE_SPECKLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse weipa/src/SpeckleyDomain.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -17136,8 +17172,8 @@ from /usr/include/boost/shared_ptr.hpp:17, from debian/stage3/include/weipa/weipa.h:28, from debian/stage3/include/weipa/ElementData.h:21, - from debian/stage3/include/weipa/FinleyElements.h:21, - from weipa/src/FinleyElements.cpp:18: + from debian/stage3/include/weipa/RipleyElements.h:21, + from weipa/src/RipleyElements.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ @@ -17152,18 +17188,15 @@ from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, from /usr/include/boost/shared_ptr.hpp:17, from debian/stage3/include/weipa/weipa.h:28, - from debian/stage3/include/weipa/NodeData.h:21, - from debian/stage3/include/weipa/FinleyNodes.h:21, - from weipa/src/FinleyNodes.cpp:18: + from debian/stage3/include/weipa/DomainChunk.h:21, + from debian/stage3/include/weipa/FinleyDomain.h:21, + from weipa/src/FinleyDomain.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/weipa/src/SpeckleyDomain.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_DUDLEY -DUSE_FINLEY -DUSE_RIPLEY -DUSE_SPECKLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse weipa/src/SpeckleyDomain.cpp -g++ -o debian/tmp3/posix/weipa/src/SpeckleyElements.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_DUDLEY -DUSE_FINLEY -DUSE_RIPLEY -DUSE_SPECKLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse weipa/src/SpeckleyElements.cpp -g++ -o debian/tmp3/posix/weipa/src/SpeckleyNodes.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_DUDLEY -DUSE_FINLEY -DUSE_RIPLEY -DUSE_SPECKLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse weipa/src/SpeckleyNodes.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -17172,16 +17205,16 @@ from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, from /usr/include/boost/shared_ptr.hpp:17, from debian/stage3/include/weipa/weipa.h:28, - from debian/stage3/include/weipa/DomainChunk.h:21, - from debian/stage3/include/weipa/RipleyDomain.h:21, - from weipa/src/RipleyDomain.cpp:18: + from debian/stage3/include/weipa/NodeData.h:21, + from debian/stage3/include/weipa/FinleyNodes.h:21, + from weipa/src/FinleyNodes.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/weipa/src/VisItControl.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_DUDLEY -DUSE_FINLEY -DUSE_RIPLEY -DUSE_SPECKLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse weipa/src/VisItControl.cpp /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/weipa/src/SpeckleyElements.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_DUDLEY -DUSE_FINLEY -DUSE_RIPLEY -DUSE_SPECKLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse weipa/src/SpeckleyElements.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -17190,16 +17223,17 @@ from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, from /usr/include/boost/shared_ptr.hpp:17, from debian/stage3/include/weipa/weipa.h:28, - from debian/stage3/include/weipa/ElementData.h:21, - from debian/stage3/include/weipa/RipleyElements.h:21, - from weipa/src/RipleyElements.cpp:18: + from debian/stage3/include/weipa/DomainChunk.h:21, + from debian/stage3/include/weipa/RipleyDomain.h:21, + from weipa/src/RipleyDomain.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/weipa/src/weipacpp.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_DUDLEY -DUSE_FINLEY -DUSE_RIPLEY -DUSE_SPECKLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse weipa/src/weipacpp.cpp +g++ -o debian/tmp3/posix/weipa/src/SpeckleyNodes.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_DUDLEY -DUSE_FINLEY -DUSE_RIPLEY -DUSE_SPECKLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse weipa/src/SpeckleyNodes.cpp +g++ -o debian/tmp3/posix/weipa/src/VisItControl.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_DUDLEY -DUSE_FINLEY -DUSE_RIPLEY -DUSE_SPECKLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse weipa/src/VisItControl.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -17234,6 +17268,7 @@ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/weipa/src/weipacpp.os -c -Wno-stringop-truncation -g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.9 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DESYS_NO_SYMPY -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_GMSH -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_DUDLEY -DUSE_FINLEY -DUSE_RIPLEY -DUSE_SPECKLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse weipa/src/weipacpp.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -17242,9 +17277,9 @@ from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, from /usr/include/boost/shared_ptr.hpp:17, from debian/stage3/include/weipa/weipa.h:28, - from debian/stage3/include/weipa/NodeData.h:21, - from debian/stage3/include/weipa/SpeckleyNodes.h:21, - from weipa/src/SpeckleyNodes.cpp:18: + from debian/stage3/include/weipa/ElementData.h:21, + from debian/stage3/include/weipa/SpeckleyElements.h:21, + from weipa/src/SpeckleyElements.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ @@ -17259,9 +17294,9 @@ from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, from /usr/include/boost/shared_ptr.hpp:17, from debian/stage3/include/weipa/weipa.h:28, - from debian/stage3/include/weipa/ElementData.h:21, - from debian/stage3/include/weipa/SpeckleyElements.h:21, - from weipa/src/SpeckleyElements.cpp:18: + from debian/stage3/include/weipa/NodeData.h:21, + from debian/stage3/include/weipa/SpeckleyNodes.h:21, + from weipa/src/SpeckleyNodes.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ @@ -17294,8 +17329,8 @@ | ^~~~~~~~~~~~~~~~~~~~~~~ g++ -o debian/tmp3/posix/ripley/src/libripley.so -Wl,-z,relro -Wl,-z,now -fopenmp -shared debian/tmp3/posix/ripley/src/blocktools.os debian/tmp3/posix/ripley/src/blocktools2.os debian/tmp3/posix/ripley/src/Brick.os debian/tmp3/posix/ripley/src/DefaultAssembler2D.os debian/tmp3/posix/ripley/src/DefaultAssembler3D.os debian/tmp3/posix/ripley/src/domainhelpers.os debian/tmp3/posix/ripley/src/LameAssembler2D.os debian/tmp3/posix/ripley/src/LameAssembler3D.os debian/tmp3/posix/ripley/src/MultiBrick.os debian/tmp3/posix/ripley/src/MultiRectangle.os debian/tmp3/posix/ripley/src/Rectangle.os debian/tmp3/posix/ripley/src/RipleyDomain.os debian/tmp3/posix/ripley/src/WaveAssembler2D.os debian/tmp3/posix/ripley/src/WaveAssembler3D.os -Ldebian/stage3/lib -L/usr/lib/python3.9/config-3.9-aarch64-linux-gnu -L/usr/lib/aarch64-linux-gnu -L/usr/lib -lpaso -lescript -lnetcdf_c++4 -lumfpack -lblas -lamd -lsiloh5 -lboost_iostreams -lpython3.9 -lboost_python39 -lboost_numpy39 Install file: "debian/tmp3/posix/ripley/src/libripley.so" as "debian/stage3/lib/libripley.so" -g++ -o debian/tmp3/posix/speckley/src/libspeckley.so -Wl,-z,relro -Wl,-z,now -fopenmp -shared debian/tmp3/posix/speckley/src/AbstractAssembler.os debian/tmp3/posix/speckley/src/Brick.os debian/tmp3/posix/speckley/src/BrickGradients.os debian/tmp3/posix/speckley/src/BrickIntegrals.os debian/tmp3/posix/speckley/src/BrickReductions.os debian/tmp3/posix/speckley/src/DefaultAssembler2D.os debian/tmp3/posix/speckley/src/DefaultAssembler3D.os debian/tmp3/posix/speckley/src/domainhelpers.os debian/tmp3/posix/speckley/src/Rectangle.os debian/tmp3/posix/speckley/src/RectangleGradients.os debian/tmp3/posix/speckley/src/RectangleIntegrals.os debian/tmp3/posix/speckley/src/RectangleReductions.os debian/tmp3/posix/speckley/src/SpeckleyDomain.os debian/tmp3/posix/speckley/src/WaveAssembler2D.os debian/tmp3/posix/speckley/src/WaveAssembler3D.os debian/tmp3/posix/speckley/src/CrossDomainCoupler.os -Ldebian/stage3/lib -L/usr/lib/python3.9/config-3.9-aarch64-linux-gnu -L/usr/lib/aarch64-linux-gnu -L/usr/lib -lripley -lpaso -lescript -lnetcdf_c++4 -lumfpack -lblas -lamd -lboost_iostreams -lsiloh5 -lpython3.9 -lboost_python39 -lboost_numpy39 g++ -o debian/tmp3/posix/ripley/src/ripleycpp.so -Wl,-z,relro -Wl,-z,now -fopenmp -shared debian/tmp3/posix/ripley/src/ripleycpp.os -Ldebian/stage3/lib -L/usr/lib/python3.9/config-3.9-aarch64-linux-gnu -L/usr/lib/aarch64-linux-gnu -L/usr/lib -lripley -lpaso -lescript -lnetcdf_c++4 -lumfpack -lblas -lamd -lsiloh5 -lboost_iostreams -lpython3.9 -lboost_python39 -lboost_numpy39 +g++ -o debian/tmp3/posix/speckley/src/libspeckley.so -Wl,-z,relro -Wl,-z,now -fopenmp -shared debian/tmp3/posix/speckley/src/AbstractAssembler.os debian/tmp3/posix/speckley/src/Brick.os debian/tmp3/posix/speckley/src/BrickGradients.os debian/tmp3/posix/speckley/src/BrickIntegrals.os debian/tmp3/posix/speckley/src/BrickReductions.os debian/tmp3/posix/speckley/src/DefaultAssembler2D.os debian/tmp3/posix/speckley/src/DefaultAssembler3D.os debian/tmp3/posix/speckley/src/domainhelpers.os debian/tmp3/posix/speckley/src/Rectangle.os debian/tmp3/posix/speckley/src/RectangleGradients.os debian/tmp3/posix/speckley/src/RectangleIntegrals.os debian/tmp3/posix/speckley/src/RectangleReductions.os debian/tmp3/posix/speckley/src/SpeckleyDomain.os debian/tmp3/posix/speckley/src/WaveAssembler2D.os debian/tmp3/posix/speckley/src/WaveAssembler3D.os debian/tmp3/posix/speckley/src/CrossDomainCoupler.os -Ldebian/stage3/lib -L/usr/lib/python3.9/config-3.9-aarch64-linux-gnu -L/usr/lib/aarch64-linux-gnu -L/usr/lib -lripley -lpaso -lescript -lnetcdf_c++4 -lumfpack -lblas -lamd -lboost_iostreams -lsiloh5 -lpython3.9 -lboost_python39 -lboost_numpy39 Install file: "debian/tmp3/posix/ripley/src/ripleycpp.so" as "debian/stage3/esys/ripley/ripleycpp.so" Install file: "debian/tmp3/posix/speckley/src/libspeckley.so" as "debian/stage3/lib/libspeckley.so" g++ -o debian/tmp3/posix/weipa/src/libweipa.so -Wl,-z,relro -Wl,-z,now -fopenmp -shared debian/tmp3/posix/weipa/src/DataVar.os debian/tmp3/posix/weipa/src/EscriptDataset.os debian/tmp3/posix/weipa/src/FinleyDomain.os debian/tmp3/posix/weipa/src/FinleyElements.os debian/tmp3/posix/weipa/src/FinleyNodes.os debian/tmp3/posix/weipa/src/RipleyDomain.os debian/tmp3/posix/weipa/src/RipleyElements.os debian/tmp3/posix/weipa/src/RipleyNodes.os debian/tmp3/posix/weipa/src/SpeckleyDomain.os debian/tmp3/posix/weipa/src/SpeckleyElements.os debian/tmp3/posix/weipa/src/SpeckleyNodes.os debian/tmp3/posix/weipa/src/VisItControl.os -Ldebian/stage3/lib -L/usr/lib/python3.9/config-3.9-aarch64-linux-gnu -L/usr/lib/aarch64-linux-gnu -L/usr/lib -ldudley -lfinley -lspeckley -lripley -lpaso -lescript -lnetcdf_c++4 -lumfpack -lblas -lamd -lboost_iostreams -lsiloh5 -lpython3.9 -lboost_python39 -lboost_numpy39 @@ -17595,6 +17630,8 @@ -------------esys.pycad ..esys.pycad.transformations.pyc ..esys.pycad.transformations +..esys.pycad.shapes.pyc +..esys.pycad.shapes ..esys.pycad.primitives.pyc ..esys.pycad.primitives ..esys.pycad.gmsh.pyc @@ -17636,8 +17673,6 @@ os print_function tempfile -..esys.pycad.shapes.pyc -..esys.pycad.shapes ..esys.pycad.extras.pyc ..esys.pycad.extras esys.pycad.extras @@ -19773,42 +19808,6 @@ subsidence xrange -------------esys.downunder -..esys.downunder.seismic.pyc -..esys.downunder.seismic -esys.downunder.seismic -Starting dump on esys.downunder.seismic with ignore at [] - HTIWave - OBSPY_AVAILABLE - Ricker - SimpleSEGYWriter - SonicHTIWave - SonicWave - TTIWave - U - VTIWave - WaveBase - Wavelet - __all__ - __builtins__ - __cached__ - __copyright__ - __doc__ - __file__ - __license__ - __loader__ - __name__ - __package__ - __spec__ - __url__ - createAbsorptionLayerFunction - division - escript - lpde - math - np - print_function - sys - time ..esys.downunder.splitminimizers.pyc ..esys.downunder.splitminimizers esys.downunder.splitminimizers @@ -19856,6 +19855,42 @@ np pdetools print_function +..esys.downunder.seismic.pyc +..esys.downunder.seismic +esys.downunder.seismic +Starting dump on esys.downunder.seismic with ignore at [] + HTIWave + OBSPY_AVAILABLE + Ricker + SimpleSEGYWriter + SonicHTIWave + SonicWave + TTIWave + U + VTIWave + WaveBase + Wavelet + __all__ + __builtins__ + __cached__ + __copyright__ + __doc__ + __file__ + __license__ + __loader__ + __name__ + __package__ + __spec__ + __url__ + createAbsorptionLayerFunction + division + escript + lpde + math + np + print_function + sys + time ..esys.downunder.splitinversioncostfunctions.pyc ..esys.downunder.splitinversioncostfunctions esys.downunder.splitinversioncostfunctions @@ -19885,10 +19920,10 @@ np print_function updateHessianWorker -..esys.downunder.mappings.pyc -..esys.downunder.mappings ..esys.downunder.regularizations.pyc ..esys.downunder.regularizations +..esys.downunder.mappings.pyc +..esys.downunder.mappings ..esys.downunder.minimizers.pyc ..esys.downunder.minimizers ..esys.downunder.magtel2d.pyc @@ -19967,10 +20002,36 @@ numpy print_function sys -..esys.downunder.inversions.pyc -..esys.downunder.inversions ..esys.downunder.inversioncostfunctions.pyc ..esys.downunder.inversioncostfunctions +..esys.downunder.inversions.pyc +..esys.downunder.inversions +..esys.downunder.dcresistivityforwardmodeling.pyc +..esys.downunder.dcresistivityforwardmodeling +esys.downunder.dcresistivityforwardmodeling +Starting dump on esys.downunder.dcresistivityforwardmodeling with ignore at [] + DcResistivityForward + DipoleDipoleSurvey + LinearPDE + Locator + PoleDipoleSurvey + PolePoleSurvey + SchlumbergerSurvey + WennerSurvey + __builtins__ + __cached__ + __doc__ + __file__ + __loader__ + __name__ + __package__ + __spec__ + division + es + pi + print_function + saveSilo + xrange ..esys.downunder.domainbuilder.pyc ..esys.downunder.domainbuilder esys.downunder.domainbuilder @@ -20000,38 +20061,12 @@ logging np print_function -..esys.downunder.dcresistivityforwardmodeling.pyc -..esys.downunder.dcresistivityforwardmodeling -esys.downunder.dcresistivityforwardmodeling -Starting dump on esys.downunder.dcresistivityforwardmodeling with ignore at [] - DcResistivityForward - DipoleDipoleSurvey - LinearPDE - Locator - PoleDipoleSurvey - PolePoleSurvey - SchlumbergerSurvey - WennerSurvey - __builtins__ - __cached__ - __doc__ - __file__ - __loader__ - __name__ - __package__ - __spec__ - division - es - pi - print_function - saveSilo - xrange ..esys.downunder.datasources.pyc ..esys.downunder.datasources -..esys.downunder.coordinates.pyc -..esys.downunder.coordinates ..esys.downunder.costfunctions.pyc ..esys.downunder.costfunctions +..esys.downunder.coordinates.pyc +..esys.downunder.coordinates Beginning /build/reproducible-path/python-escript-5.6/debian/stage3/esys/downunder/forwardmodels esys.downunder.forwardmodels Starting dump on esys.downunder.forwardmodels with ignore at [] @@ -21084,26 +21119,23 @@ zeros Dump of esys.downunder.forwardmodels complete -------------esys.downunder.forwardmodels -..esys.downunder.forwardmodels.pressure.pyc -..esys.downunder.forwardmodels.pressure -esys.downunder.forwardmodels.pressure -Starting dump on esys.downunder.forwardmodels.pressure with ignore at [] +..esys.downunder.forwardmodels.subsidence.pyc +..esys.downunder.forwardmodels.subsidence +esys.downunder.forwardmodels.subsidence +Starting dump on esys.downunder.forwardmodels.subsidence with ignore at [] Abs C_GeneralTensorProduct DBLE_MAX Data EPSILON FileWriter - Function - IsostaticPressure + ForwardModel + FunctionOnBoundary L2 - LinearSinglePDE + LinearPDESystem Lsup NumpyToData - PI - Scalar - U - Vector + Subsidence __all__ __builtins__ __cached__ @@ -21186,7 +21218,6 @@ log10 longestEdge makeTagMap - makeTransformation matchShape matchType math @@ -21247,23 +21278,52 @@ wherePositive whereZero zeros -..esys.downunder.forwardmodels.subsidence.pyc -..esys.downunder.forwardmodels.subsidence -esys.downunder.forwardmodels.subsidence -Starting dump on esys.downunder.forwardmodels.subsidence with ignore at [] +..esys.downunder.forwardmodels.magnetotelluric2d.pyc +..esys.downunder.forwardmodels.magnetotelluric2d +esys.downunder.forwardmodels.magnetotelluric2d +Starting dump on esys.downunder.forwardmodels.magnetotelluric2d with ignore at [] + ForwardModel + MT2DBase + MT2DModelTEMode + MT2DModelTMMode + __all__ + __builtins__ + __cached__ + __copyright__ + __doc__ + __file__ + __license__ + __loader__ + __name__ + __package__ + __spec__ + __url__ + coords + division + escript + lpde + math + print_function +..esys.downunder.forwardmodels.pressure.pyc +..esys.downunder.forwardmodels.pressure +esys.downunder.forwardmodels.pressure +Starting dump on esys.downunder.forwardmodels.pressure with ignore at [] Abs C_GeneralTensorProduct DBLE_MAX Data EPSILON FileWriter - ForwardModel - FunctionOnBoundary + Function + IsostaticPressure L2 - LinearPDESystem + LinearSinglePDE Lsup NumpyToData - Subsidence + PI + Scalar + U + Vector __all__ __builtins__ __cached__ @@ -21346,6 +21406,7 @@ log10 longestEdge makeTagMap + makeTransformation matchShape matchType math @@ -21406,32 +21467,6 @@ wherePositive whereZero zeros -..esys.downunder.forwardmodels.magnetotelluric2d.pyc -..esys.downunder.forwardmodels.magnetotelluric2d -esys.downunder.forwardmodels.magnetotelluric2d -Starting dump on esys.downunder.forwardmodels.magnetotelluric2d with ignore at [] - ForwardModel - MT2DBase - MT2DModelTEMode - MT2DModelTMMode - __all__ - __builtins__ - __cached__ - __copyright__ - __doc__ - __file__ - __license__ - __loader__ - __name__ - __package__ - __spec__ - __url__ - coords - division - escript - lpde - math - print_function ..esys.downunder.forwardmodels.magnetic.pyc ..esys.downunder.forwardmodels.magnetic esys.downunder.forwardmodels.magnetic @@ -21754,23 +21789,22 @@ wherePositive whereZero zeros -..esys.downunder.forwardmodels.gravity.pyc -..esys.downunder.forwardmodels.gravity -esys.downunder.forwardmodels.gravity -Starting dump on esys.downunder.forwardmodels.gravity with ignore at [] +..esys.downunder.forwardmodels.base.pyc +..esys.downunder.forwardmodels.base +esys.downunder.forwardmodels.base +Starting dump on esys.downunder.forwardmodels.base with ignore at [] Abs C_GeneralTensorProduct DBLE_MAX Data EPSILON FileWriter + ForwardModel ForwardModelWithPotential - GravityModel L2 + LinearSinglePDE Lsup NumpyToData - PI - U __all__ __builtins__ __cached__ @@ -21853,6 +21887,7 @@ log10 longestEdge makeTagMap + makeTransformation matchShape matchType math @@ -21869,6 +21904,7 @@ negative nonsymmetric normalize + np numbers numpy os @@ -21913,22 +21949,23 @@ wherePositive whereZero zeros -..esys.downunder.forwardmodels.base.pyc -..esys.downunder.forwardmodels.base -esys.downunder.forwardmodels.base -Starting dump on esys.downunder.forwardmodels.base with ignore at [] +..esys.downunder.forwardmodels.gravity.pyc +..esys.downunder.forwardmodels.gravity +esys.downunder.forwardmodels.gravity +Starting dump on esys.downunder.forwardmodels.gravity with ignore at [] Abs C_GeneralTensorProduct DBLE_MAX Data EPSILON FileWriter - ForwardModel ForwardModelWithPotential + GravityModel L2 - LinearSinglePDE Lsup NumpyToData + PI + U __all__ __builtins__ __cached__ @@ -22011,7 +22048,6 @@ log10 longestEdge makeTagMap - makeTransformation matchShape matchType math @@ -22028,7 +22064,6 @@ negative nonsymmetric normalize - np numbers numpy os @@ -22340,14 +22375,14 @@ whereZero zeros -------------esys.downunder.apps +..esys.downunder.apps.magneticModels.pyc +..esys.downunder.apps.magneticModels ..esys.downunder.apps.seismicModels.pyc ..esys.downunder.apps.seismicModels ..esys.downunder.apps.gravityModels.pyc ..esys.downunder.apps.gravityModels ..esys.downunder.apps.dcModels.pyc ..esys.downunder.apps.dcModels -..esys.downunder.apps.magneticModels.pyc -..esys.downunder.apps.magneticModels ..esys.downunder.apps.MTModels.pyc ..esys.downunder.apps.MTModels Running Sphinx v3.4.3 @@ -22637,9 +22672,9 @@ Copy: /build/reproducible-path/python-escript-5.6/ripley/py_src/MultiResolutionDomain.py esys/ripley/MultiResolutionDomain.py os.makedirs(esys/pycad) Copy: /build/reproducible-path/python-escript-5.6/pycad/py_src/transformations.py esys/pycad/transformations.py +Copy: /build/reproducible-path/python-escript-5.6/pycad/py_src/shapes.py esys/pycad/shapes.py Copy: /build/reproducible-path/python-escript-5.6/pycad/py_src/primitives.py esys/pycad/primitives.py Copy: /build/reproducible-path/python-escript-5.6/pycad/py_src/gmsh.py esys/pycad/gmsh.py -Copy: /build/reproducible-path/python-escript-5.6/pycad/py_src/shapes.py esys/pycad/shapes.py Copy: /build/reproducible-path/python-escript-5.6/pycad/py_src/extras.py esys/pycad/extras.py Copy: /build/reproducible-path/python-escript-5.6/pycad/py_src/design.py esys/pycad/design.py Copy: /build/reproducible-path/python-escript-5.6/pycad/py_src/__init__.py esys/pycad/__init__.py @@ -22656,8 +22691,8 @@ Copy: /build/reproducible-path/python-escript-5.6/modellib/py_src/__init__.py esys/modellib/__init__.py os.makedirs(esys/finley) Copy: /build/reproducible-path/python-escript-5.6/finley/py_src/readers.py esys/finley/readers.py -Copy: /build/reproducible-path/python-escript-5.6/finley/py_src/factorywrappers.py esys/finley/factorywrappers.py Copy: /build/reproducible-path/python-escript-5.6/finley/py_src/__init__.py esys/finley/__init__.py +Copy: /build/reproducible-path/python-escript-5.6/finley/py_src/factorywrappers.py esys/finley/factorywrappers.py os.makedirs(esys/escriptcore) Copy: /build/reproducible-path/python-escript-5.6/escriptcore/py_src/util.py esys/escriptcore/util.py Copy: /build/reproducible-path/python-escript-5.6/escriptcore/py_src/utestselect.py esys/escriptcore/utestselect.py @@ -22671,24 +22706,24 @@ Copy: /build/reproducible-path/python-escript-5.6/escriptcore/py_src/nonlinearPDE.py esys/escriptcore/nonlinearPDE.py Copy: /build/reproducible-path/python-escript-5.6/escriptcore/py_src/mountains.py esys/escriptcore/mountains.py Copy: /build/reproducible-path/python-escript-5.6/escriptcore/py_src/models.py esys/escriptcore/models.py -Copy: /build/reproducible-path/python-escript-5.6/escriptcore/py_src/linearPDEs.py esys/escriptcore/linearPDEs.py Copy: /build/reproducible-path/python-escript-5.6/escriptcore/py_src/modelframe.py esys/escriptcore/modelframe.py +Copy: /build/reproducible-path/python-escript-5.6/escriptcore/py_src/linearPDEs.py esys/escriptcore/linearPDEs.py Copy: /build/reproducible-path/python-escript-5.6/escriptcore/py_src/levelset.py esys/escriptcore/levelset.py Copy: /build/reproducible-path/python-escript-5.6/escriptcore/py_src/heat.py esys/escriptcore/heat.py -Copy: /build/reproducible-path/python-escript-5.6/escriptcore/py_src/faultsystems.py esys/escriptcore/faultsystems.py Copy: /build/reproducible-path/python-escript-5.6/escriptcore/py_src/gmshrunner.py esys/escriptcore/gmshrunner.py Copy: /build/reproducible-path/python-escript-5.6/escriptcore/py_src/flows.py esys/escriptcore/flows.py +Copy: /build/reproducible-path/python-escript-5.6/escriptcore/py_src/faultsystems.py esys/escriptcore/faultsystems.py Copy: /build/reproducible-path/python-escript-5.6/escriptcore/py_src/domainCouplers.py esys/escriptcore/domainCouplers.py Copy: /build/reproducible-path/python-escript-5.6/escriptcore/py_src/datamanager.py esys/escriptcore/datamanager.py Copy: /build/reproducible-path/python-escript-5.6/escriptcore/py_src/benchmark.py esys/escriptcore/benchmark.py Copy: /build/reproducible-path/python-escript-5.6/escriptcore/py_src/__init__.py esys/escriptcore/__init__.py os.makedirs(esys/escriptcore/symbolic) Copy: /build/reproducible-path/python-escript-5.6/escriptcore/py_src/symbolic/utils.py esys/escriptcore/symbolic/utils.py -Copy: /build/reproducible-path/python-escript-5.6/escriptcore/py_src/symbolic/symbol.py esys/escriptcore/symbolic/symbol.py Copy: /build/reproducible-path/python-escript-5.6/escriptcore/py_src/symbolic/symconstants.py esys/escriptcore/symbolic/symconstants.py +Copy: /build/reproducible-path/python-escript-5.6/escriptcore/py_src/symbolic/symbol.py esys/escriptcore/symbolic/symbol.py Copy: /build/reproducible-path/python-escript-5.6/escriptcore/py_src/symbolic/pretty.py esys/escriptcore/symbolic/pretty.py -Copy: /build/reproducible-path/python-escript-5.6/escriptcore/py_src/symbolic/functions.py esys/escriptcore/symbolic/functions.py Copy: /build/reproducible-path/python-escript-5.6/escriptcore/py_src/symbolic/evaluator.py esys/escriptcore/symbolic/evaluator.py +Copy: /build/reproducible-path/python-escript-5.6/escriptcore/py_src/symbolic/functions.py esys/escriptcore/symbolic/functions.py Copy: /build/reproducible-path/python-escript-5.6/escriptcore/py_src/symbolic/__init__.py esys/escriptcore/symbolic/__init__.py os.makedirs(esys/escript) Copy: /build/reproducible-path/python-escript-5.6/escript/py_src/util.py esys/escript/util.py @@ -22706,39 +22741,39 @@ Copy: /build/reproducible-path/python-escript-5.6/dudley/py_src/factorywrappers.py esys/dudley/factorywrappers.py Copy: /build/reproducible-path/python-escript-5.6/dudley/py_src/__init__.py esys/dudley/__init__.py os.makedirs(esys/downunder) -Copy: /build/reproducible-path/python-escript-5.6/downunder/py_src/seismic.py esys/downunder/seismic.py Copy: /build/reproducible-path/python-escript-5.6/downunder/py_src/splitminimizers.py esys/downunder/splitminimizers.py Copy: /build/reproducible-path/python-escript-5.6/downunder/py_src/splitregularizations.py esys/downunder/splitregularizations.py +Copy: /build/reproducible-path/python-escript-5.6/downunder/py_src/seismic.py esys/downunder/seismic.py Copy: /build/reproducible-path/python-escript-5.6/downunder/py_src/splitinversioncostfunctions.py esys/downunder/splitinversioncostfunctions.py -Copy: /build/reproducible-path/python-escript-5.6/downunder/py_src/mappings.py esys/downunder/mappings.py Copy: /build/reproducible-path/python-escript-5.6/downunder/py_src/regularizations.py esys/downunder/regularizations.py +Copy: /build/reproducible-path/python-escript-5.6/downunder/py_src/mappings.py esys/downunder/mappings.py Copy: /build/reproducible-path/python-escript-5.6/downunder/py_src/minimizers.py esys/downunder/minimizers.py Copy: /build/reproducible-path/python-escript-5.6/downunder/py_src/magtel2d.py esys/downunder/magtel2d.py Copy: /build/reproducible-path/python-escript-5.6/downunder/py_src/magtel1d.py esys/downunder/magtel1d.py -Copy: /build/reproducible-path/python-escript-5.6/downunder/py_src/inversions.py esys/downunder/inversions.py Copy: /build/reproducible-path/python-escript-5.6/downunder/py_src/inversioncostfunctions.py esys/downunder/inversioncostfunctions.py -Copy: /build/reproducible-path/python-escript-5.6/downunder/py_src/domainbuilder.py esys/downunder/domainbuilder.py +Copy: /build/reproducible-path/python-escript-5.6/downunder/py_src/inversions.py esys/downunder/inversions.py Copy: /build/reproducible-path/python-escript-5.6/downunder/py_src/dcresistivityforwardmodeling.py esys/downunder/dcresistivityforwardmodeling.py +Copy: /build/reproducible-path/python-escript-5.6/downunder/py_src/domainbuilder.py esys/downunder/domainbuilder.py Copy: /build/reproducible-path/python-escript-5.6/downunder/py_src/datasources.py esys/downunder/datasources.py -Copy: /build/reproducible-path/python-escript-5.6/downunder/py_src/coordinates.py esys/downunder/coordinates.py Copy: /build/reproducible-path/python-escript-5.6/downunder/py_src/costfunctions.py esys/downunder/costfunctions.py +Copy: /build/reproducible-path/python-escript-5.6/downunder/py_src/coordinates.py esys/downunder/coordinates.py Copy: /build/reproducible-path/python-escript-5.6/downunder/py_src/__init__.py esys/downunder/__init__.py os.makedirs(esys/downunder/forwardmodels) -Copy: /build/reproducible-path/python-escript-5.6/downunder/py_src/forwardmodels/pressure.py esys/downunder/forwardmodels/pressure.py Copy: /build/reproducible-path/python-escript-5.6/downunder/py_src/forwardmodels/subsidence.py esys/downunder/forwardmodels/subsidence.py Copy: /build/reproducible-path/python-escript-5.6/downunder/py_src/forwardmodels/magnetotelluric2d.py esys/downunder/forwardmodels/magnetotelluric2d.py +Copy: /build/reproducible-path/python-escript-5.6/downunder/py_src/forwardmodels/pressure.py esys/downunder/forwardmodels/pressure.py Copy: /build/reproducible-path/python-escript-5.6/downunder/py_src/forwardmodels/magnetic.py esys/downunder/forwardmodels/magnetic.py Copy: /build/reproducible-path/python-escript-5.6/downunder/py_src/forwardmodels/dcresistivity.py esys/downunder/forwardmodels/dcresistivity.py -Copy: /build/reproducible-path/python-escript-5.6/downunder/py_src/forwardmodels/gravity.py esys/downunder/forwardmodels/gravity.py Copy: /build/reproducible-path/python-escript-5.6/downunder/py_src/forwardmodels/base.py esys/downunder/forwardmodels/base.py -Copy: /build/reproducible-path/python-escript-5.6/downunder/py_src/forwardmodels/__init__.py esys/downunder/forwardmodels/__init__.py +Copy: /build/reproducible-path/python-escript-5.6/downunder/py_src/forwardmodels/gravity.py esys/downunder/forwardmodels/gravity.py Copy: /build/reproducible-path/python-escript-5.6/downunder/py_src/forwardmodels/acoustic.py esys/downunder/forwardmodels/acoustic.py +Copy: /build/reproducible-path/python-escript-5.6/downunder/py_src/forwardmodels/__init__.py esys/downunder/forwardmodels/__init__.py os.makedirs(esys/downunder/apps) +Copy: /build/reproducible-path/python-escript-5.6/downunder/py_src/apps/magneticModels.py esys/downunder/apps/magneticModels.py Copy: /build/reproducible-path/python-escript-5.6/downunder/py_src/apps/seismicModels.py esys/downunder/apps/seismicModels.py Copy: /build/reproducible-path/python-escript-5.6/downunder/py_src/apps/gravityModels.py esys/downunder/apps/gravityModels.py -Copy: /build/reproducible-path/python-escript-5.6/downunder/py_src/apps/dcModels.py esys/downunder/apps/dcModels.py Copy: /build/reproducible-path/python-escript-5.6/downunder/py_src/apps/__init__.py esys/downunder/apps/__init__.py -Copy: /build/reproducible-path/python-escript-5.6/downunder/py_src/apps/magneticModels.py esys/downunder/apps/magneticModels.py +Copy: /build/reproducible-path/python-escript-5.6/downunder/py_src/apps/dcModels.py esys/downunder/apps/dcModels.py Copy: /build/reproducible-path/python-escript-5.6/downunder/py_src/apps/MTModels.py esys/downunder/apps/MTModels.py cp /build/reproducible-path/python-escript-5.6/doc/manpage/man1/run-escript.1 /build/reproducible-path/python-escript-5.6/debian/stage3/run-escript3.man ln /build/reproducible-path/python-escript-5.6/debian/stage3/bin/run-escript /build/reproducible-path/python-escript-5.6/debian/stage3/bin/run-escript3 @@ -22750,7 +22785,7 @@ [GCC 10.2.1 20210110] Building with the following additional flags from debian: [['cpp_flags', '-Wdate-time -D_FORTIFY_SOURCE=2'], ['cxx_extra', '-g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized'], ['ld_extra', '-Wl,-z,relro -Wl,-z,now']] Using options in debian/sid_options.py. -/bin/sh: 1: svnversion: not found +/bin/sh: line 1: svnversion: command not found Checking whether the C++ compiler works... (cached) yes Checking for C++ function gethostname()... (cached) yes Checking for C++ header file byteswap.h... (cached) yes @@ -22769,7 +22804,7 @@ Checking for C++ library umfpack... (cached) yes Checking for C++ library siloh5... (cached) yes Checking for C++ library boost_iostreams... (cached) yes -Matplotlib created a temporary config/cache directory at /tmp/matplotlib-ec33zp4y because the default path (/nonexistent/first-build/.config/matplotlib) is not a writable directory; it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing. +Matplotlib created a temporary config/cache directory at /tmp/matplotlib-f2shgqhy because the default path (/nonexistent/second-build/.config/matplotlib) is not a writable directory; it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing. Traceback (most recent call last): File "", line 1, in ImportError: cannot import name 'griddata' from 'matplotlib.mlab' (/usr/lib/python3/dist-packages/matplotlib/mlab.py) @@ -22788,15 +22823,18 @@ Install file: "debian/tmp3/posix/downunder/apps/MTModels.pyc" as "debian/stage3/esys/downunder/apps/MTModels.pyc" Install file: "debian/tmp3/posix/downunder/apps/__init__.pyc" as "debian/stage3/esys/downunder/apps/__init__.pyc" Install file: "debian/tmp3/posix/downunder/apps/dcModels.pyc" as "debian/stage3/esys/downunder/apps/dcModels.pyc" +Install file: "debian/tmp3/posix/downunder/apps/gravityModels.pyc" as "debian/stage3/esys/downunder/apps/gravityModels.pyc" Install file: "debian/tmp3/posix/downunder/apps/magneticModels.pyc" as "debian/stage3/esys/downunder/apps/magneticModels.pyc" Install file: "debian/tmp3/posix/downunder/apps/seismicModels.pyc" as "debian/stage3/esys/downunder/apps/seismicModels.pyc" Install file: "debian/tmp3/posix/downunder/coordinates.pyc" as "debian/stage3/esys/downunder/coordinates.pyc" -Install file: "debian/tmp3/posix/downunder/apps/gravityModels.pyc" as "debian/stage3/esys/downunder/apps/gravityModels.pyc" Install file: "debian/tmp3/posix/downunder/costfunctions.pyc" as "debian/stage3/esys/downunder/costfunctions.pyc" Install file: "debian/tmp3/posix/downunder/datasources.pyc" as "debian/stage3/esys/downunder/datasources.pyc" -sh: 1: svnversion: not found +Install file: "debian/tmp3/posix/downunder/dcresistivityforwardmodeling.pyc" as "debian/stage3/esys/downunder/dcresistivityforwardmodeling.pyc" +sh: line 1: svnversion: command not found +Install file: "debian/tmp3/posix/downunder/domainbuilder.pyc" as "debian/stage3/esys/downunder/domainbuilder.pyc" warning: Tag 'TCL_SUBST' at line 237 of file '-' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" +Install file: "debian/tmp3/posix/downunder/forwardmodels/__init__.pyc" as "debian/stage3/esys/downunder/forwardmodels/__init__.pyc" warning: Tag 'COLS_IN_ALPHA_INDEX' at line 1026 of file '-' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'PERL_PATH' at line 2057 of file '-' has become obsolete. @@ -22805,9 +22843,6 @@ To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: argument 'a4wide' for option PAPER_TYPE is not a valid enum value Using the default: a4! -Install file: "debian/tmp3/posix/downunder/dcresistivityforwardmodeling.pyc" as "debian/stage3/esys/downunder/dcresistivityforwardmodeling.pyc" -Install file: "debian/tmp3/posix/downunder/domainbuilder.pyc" as "debian/stage3/esys/downunder/domainbuilder.pyc" -Install file: "debian/tmp3/posix/downunder/forwardmodels/__init__.pyc" as "debian/stage3/esys/downunder/forwardmodels/__init__.pyc" Install file: "debian/tmp3/posix/downunder/forwardmodels/acoustic.pyc" as "debian/stage3/esys/downunder/forwardmodels/acoustic.pyc" Install file: "debian/tmp3/posix/downunder/forwardmodels/base.pyc" as "debian/stage3/esys/downunder/forwardmodels/base.pyc" Install file: "debian/tmp3/posix/downunder/forwardmodels/dcresistivity.pyc" as "debian/stage3/esys/downunder/forwardmodels/dcresistivity.pyc" @@ -22817,17 +22852,15 @@ Install file: "debian/tmp3/posix/downunder/forwardmodels/pressure.pyc" as "debian/stage3/esys/downunder/forwardmodels/pressure.pyc" Install file: "debian/tmp3/posix/downunder/forwardmodels/subsidence.pyc" as "debian/stage3/esys/downunder/forwardmodels/subsidence.pyc" Install file: "debian/tmp3/posix/downunder/inversioncostfunctions.pyc" as "debian/stage3/esys/downunder/inversioncostfunctions.pyc" -Install file: "debian/tmp3/posix/downunder/inversions.pyc" as "debian/stage3/esys/downunder/inversions.pyc" -Install file: "debian/tmp3/posix/downunder/magtel1d.pyc" as "debian/stage3/esys/downunder/magtel1d.pyc" Install file: "debian/tmp3/posix/downunder/magtel2d.pyc" as "debian/stage3/esys/downunder/magtel2d.pyc" +Install file: "debian/tmp3/posix/downunder/magtel1d.pyc" as "debian/stage3/esys/downunder/magtel1d.pyc" +Install file: "debian/tmp3/posix/downunder/inversions.pyc" as "debian/stage3/esys/downunder/inversions.pyc" Install file: "debian/tmp3/posix/downunder/mappings.pyc" as "debian/stage3/esys/downunder/mappings.pyc" Install file: "debian/tmp3/posix/downunder/minimizers.pyc" as "debian/stage3/esys/downunder/minimizers.pyc" Install file: "debian/tmp3/posix/downunder/regularizations.pyc" as "debian/stage3/esys/downunder/regularizations.pyc" Install file: "debian/tmp3/posix/downunder/seismic.pyc" as "debian/stage3/esys/downunder/seismic.pyc" Install file: "debian/tmp3/posix/downunder/splitinversioncostfunctions.pyc" as "debian/stage3/esys/downunder/splitinversioncostfunctions.pyc" Install file: "debian/tmp3/posix/downunder/splitminimizers.pyc" as "debian/stage3/esys/downunder/splitminimizers.pyc" -Install file: "debian/tmp3/posix/downunder/splitregularizations.pyc" as "debian/stage3/esys/downunder/splitregularizations.pyc" -Install file: "debian/tmp3/posix/dudley/py/__init__.pyc" as "debian/stage3/esys/dudley/__init__.pyc" Doxygen version used: 1.9.1 Searching for include files... Searching for example files... @@ -22878,7 +22911,9 @@ Preprocessing /build/reproducible-path/python-escript-5.6/escriptcore/src/BinaryDataReadyOps.h... Parsing file /build/reproducible-path/python-escript-5.6/escriptcore/src/BinaryDataReadyOps.h... Preprocessing /build/reproducible-path/python-escript-5.6/escriptcore/src/Data.cpp... -Parsing file /build/reproducible-path/python-escript-5.6/escriptcore/src/build/reproducible-path/python-escript-5.6/escriptcore/src/DataLazy.cpp:3008: warning: Reached end of file while still inside a (nested) comment. Nesting level 1 (probable line reference: 55) +Parsing file /build/reproducible-path/python-escript-5.6/escriptcore/srcInstall file: "debian/tmp3/posix/downunder/splitregularizations.pyc" as "debian/stage3/esys/downunder/splitregularizations.pyc" +Install file: "debian/tmp3/posix/dudley/py/__init__.pyc" as "debian/stage3/esys/dudley/__init__.pyc" +/build/reproducible-path/python-escript-5.6/escriptcore/src/DataLazy.cpp:3008: warning: Reached end of file while still inside a (nested) comment. Nesting level 1 (probable line reference: 55) /Data.cpp... Preprocessing /build/reproducible-path/python-escript-5.6/escriptcore/src/Data.h... Parsing file /build/reproducible-path/python-escript-5.6/escriptcore/src/Data.h... @@ -24755,22 +24790,6 @@ /build/reproducible-path/python-escript-5.6/finley/src/FinleyDomain.h:161: warning: The following parameters of finley::FinleyDomain::createRec4(dim_t NE0, dim_t NE1, double L0, double L1, bool periodic0, bool periodic1, int order, int reducedOrder, bool useElementsOnFace, bool optimize, escript::JMPI jmpi) are not documented: parameter 'L0' parameter 'L1' -Install file: "debian/tmp3/posix/dudley/py/factorywrappers.pyc" as "debian/stage3/esys/dudley/factorywrappers.pyc" -Install file: "debian/tmp3/posix/dudley/py/readers.pyc" as "debian/stage3/esys/dudley/readers.pyc" -Install file: "debian/tmp3/posix/escript/__init__.pyc" as "debian/stage3/esys/escript/__init__.pyc" -Install file: "debian/tmp3/posix/escript/datamanager.pyc" as "debian/stage3/esys/escript/datamanager.pyc" -Install file: "debian/tmp3/posix/escript/linearPDEs.pyc" as "debian/stage3/esys/escript/linearPDEs.pyc" -Install file: "debian/tmp3/posix/escript/modelframe.pyc" as "debian/stage3/esys/escript/modelframe.pyc" -Install file: "debian/tmp3/posix/escript/models.pyc" as "debian/stage3/esys/escript/models.pyc" -Install file: "debian/tmp3/posix/escript/pdetools.pyc" as "debian/stage3/esys/escript/pdetools.pyc" -Install file: "debian/tmp3/posix/escript/splitworld.pyc" as "debian/stage3/esys/escript/splitworld.pyc" -Install file: "debian/tmp3/posix/escript/symbolic.pyc" as "debian/stage3/esys/escript/symbolic.pyc" -Install file: "debian/tmp3/posix/escript/unitsSI.pyc" as "debian/stage3/esys/escript/unitsSI.pyc" -Install file: "debian/tmp3/posix/escript/util.pyc" as "debian/stage3/esys/escript/util.pyc" -Install file: "debian/tmp3/posix/escriptcore/py/__init__.pyc" as "debian/stage3/esys/escriptcore/__init__.pyc" -Install file: "debian/tmp3/posix/escriptcore/py/benchmark.pyc" as "debian/stage3/esys/escriptcore/benchmark.pyc" -Install file: "debian/tmp3/posix/escriptcore/py/datamanager.pyc" as "debian/stage3/esys/escriptcore/datamanager.pyc" -Install file: "debian/tmp3/posix/escriptcore/py/domainCouplers.pyc" as "debian/stage3/esys/escriptcore/domainCouplers.pyc" ng docs for compound escript::AbstractReducer... Generating docs for compound escript::AbstractSystemMatrix... Generating docs for compound escript::AbstractTransportProblem... @@ -24868,46 +24887,34 @@ parameter 'tags' parameter 'tagnamestonums' parameter 'w' -Install file: "debian/tmp3/posix/escriptcore/py/faultsystems.pyc" as "debian/stage3/esys/escriptcore/faultsystems.pyc" -Install file: "debian/tmp3/posix/escriptcore/py/flows.pyc" as "debian/stage3/esys/escriptcore/flows.pyc" -Install file: "debian/tmp3/posix/escriptcore/py/gmshrunner.pyc" as "debian/stage3/esys/escriptcore/gmshrunner.pyc" -Install file: "debian/tmp3/posix/escriptcore/py/heat.pyc" as "debian/stage3/esys/escriptcore/heat.pyc" -Install file: "debian/tmp3/posix/escriptcore/py/levelset.pyc" as "debian/stage3/esys/escriptcore/levelset.pyc" -Install file: "debian/tmp3/posix/escriptcore/py/linearPDEs.pyc" as "debian/stage3/esys/escriptcore/linearPDEs.pyc" -Install file: "debian/tmp3/posix/escriptcore/py/modelframe.pyc" as "debian/stage3/esys/escriptcore/modelframe.pyc" -Install file: "debian/tmp3/posix/escriptcore/py/models.pyc" as "debian/stage3/esys/escriptcore/models.pyc" -Install file: "debian/tmp3/posix/escriptcore/py/mountains.pyc" as "debian/stage3/esys/escriptcore/mountains.pyc" -Install file: "debian/tmp3/posix/escriptcore/py/nonlinearPDE.pyc" as "debian/stage3/esys/escriptcore/nonlinearPDE.pyc" -Install file: "debian/tmp3/posix/escriptcore/py/pdetools.pyc" as "debian/stage3/esys/escriptcore/pdetools.pyc" -Install file: "debian/tmp3/posix/escriptcore/py/rheologies.pyc" as "debian/stage3/esys/escriptcore/rheologies.pyc" -Install file: "debian/tmp3/posix/escriptcore/py/runmodel.pyc" as "debian/stage3/esys/escriptcore/runmodel.pyc" -Install file: "debian/tmp3/posix/escriptcore/py/splitworld.pyc" as "debian/stage3/esys/escriptcore/splitworld.pyc" -Install file: "debian/tmp3/posix/escriptcore/py/start.pyc" as "debian/stage3/esys/escriptcore/start.pyc" -Install file: "debian/tmp3/posix/escriptcore/py/symbolic/__init__.pyc" as "debian/stage3/esys/escriptcore/symbolic/__init__.pyc" -Install file: "debian/tmp3/posix/escriptcore/py/symbolic/evaluator.pyc" as "debian/stage3/esys/escriptcore/symbolic/evaluator.pyc" -Install file: "debian/tmp3/posix/escriptcore/py/symbolic/functions.pyc" as "debian/stage3/esys/escriptcore/symbolic/functions.pyc" -Install file: "debian/tmp3/posix/escriptcore/py/symbolic/pretty.pyc" as "debian/stage3/esys/escriptcore/symbolic/pretty.pyc" -Install file: "debian/tmp3/posix/escriptcore/py/symbolic/symbol.pyc" as "debian/stage3/esys/escriptcore/symbolic/symbol.pyc" -Install file: "debian/tmp3/posix/escriptcore/py/symbolic/symconstants.pyc" as "debian/stage3/esys/escriptcore/symbolic/symconstants.pyc" -Install file: "debian/tmp3/posix/escriptcore/py/symbolic/utils.pyc" as "debian/stage3/esys/escriptcore/symbolic/utils.pyc" -Install file: "debian/tmp3/posix/escriptcore/py/testing.pyc" as "debian/stage3/esys/escriptcore/testing.pyc" -Install file: "debian/tmp3/posix/escriptcore/py/unitsSI.pyc" as "debian/stage3/esys/escriptcore/unitsSI.pyc" -Install file: "debian/tmp3/posix/escriptcore/py/utestselect.pyc" as "debian/stage3/esys/escriptcore/utestselect.pyc" -Install file: "debian/tmp3/posix/escriptcore/py/util.pyc" as "debian/stage3/esys/escriptcore/util.pyc" -Install file: "debian/tmp3/posix/finley/py/__init__.pyc" as "debian/stage3/esys/finley/__init__.pyc" -Install file: "debian/tmp3/posix/finley/py/factorywrappers.pyc" as "debian/stage3/esys/finley/factorywrappers.pyc" /build/reproducible-path/python-escript-5.6/speckley/src/Brick.h:46: warning: The following parameters of speckley::Brick::Brick(int order, dim_t n0, dim_t n1, dim_t n2, double x0, double y0, double z0, double x1, double y1, double z1, int d0=-1, int d1=-1, int d2=-1, const std::vector< double > &points=std::vector< double >(), const std::vector< int > &tags=std::vector< int >(), const TagMap &tagnamestonums=TagMap(), escript::SubWorld_ptr w=escript::SubWorld_ptr()) are not documented: parameter 'order' parameter 'points' parameter 'tags' parameter 'tagnamestonums' parameter 'w' +Install file: "debian/tmp3/posix/dudley/py/factorywrappers.pyc" as "debian/stage3/esys/dudley/factorywrappers.pyc" +Install file: "debian/tmp3/posix/dudley/py/readers.pyc" as "debian/stage3/esys/dudley/readers.pyc" +Install file: "debian/tmp3/posix/escript/__init__.pyc" as "debian/stage3/esys/escript/__init__.pyc" +Install file: "debian/tmp3/posix/escript/datamanager.pyc" as "debian/stage3/esys/escript/datamanager.pyc" +Install file: "debian/tmp3/posix/escript/linearPDEs.pyc" as "debian/stage3/esys/escript/linearPDEs.pyc" +Install file: "debian/tmp3/posix/escript/modelframe.pyc" as "debian/stage3/esys/escript/modelframe.pyc" +Install file: "debian/tmp3/posix/escript/models.pyc" as "debian/stage3/esys/escript/models.pyc" /build/reproducible-path/python-escript-5.6/speckley/src/Rectangle.h:44: warning: The following parameters of speckley::Rectangle::Rectangle(int order, dim_t n0, dim_t n1, double x0, double y0, double x1, double y1, int d0=-1, int d1=-1, const std::vector< double > &points=std::vector< double >(), const std::vector< int > &tags=std::vector< int >(), const TagMap &tagnamestonums=TagMap(), escript::SubWorld_ptr w=escript::SubWorld_ptr()) are not documented: parameter 'order' parameter 'points' parameter 'tags' parameter 'tagnamestonums' parameter 'w' +Install file: "debian/tmp3/posix/escript/pdetools.pyc" as "debian/stage3/esys/escript/pdetools.pyc" +Install file: "debian/tmp3/posix/escript/splitworld.pyc" as "debian/stage3/esys/escript/splitworld.pyc" +Install file: "debian/tmp3/posix/escript/symbolic.pyc" as "debian/stage3/esys/escript/symbolic.pyc" +Install file: "debian/tmp3/posix/escript/unitsSI.pyc" as "debian/stage3/esys/escript/unitsSI.pyc" +Install file: "debian/tmp3/posix/escript/util.pyc" as "debian/stage3/esys/escript/util.pyc" +Install file: "debian/tmp3/posix/escriptcore/py/datamanager.pyc" as "debian/stage3/esys/escriptcore/datamanager.pyc" +Install file: "debian/tmp3/posix/escriptcore/py/benchmark.pyc" as "debian/stage3/esys/escriptcore/benchmark.pyc" +Install file: "debian/tmp3/posix/escriptcore/py/__init__.pyc" as "debian/stage3/esys/escriptcore/__init__.pyc" +Install file: "debian/tmp3/posix/escriptcore/py/domainCouplers.pyc" as "debian/stage3/esys/escriptcore/domainCouplers.pyc" paso::MUMPS_Handler< cplx_t >... Generating docs for compound paso::Options... Generating docs for compound paso::PasoException... @@ -24989,7 +24996,35 @@ Generating annotated compound index... Generating alphabetical compound index... Generating hierarchical class index... -Generating member index... +Generating mInstall file: "debian/tmp3/posix/escriptcore/py/gmshrunner.pyc" as "debian/stage3/esys/escriptcore/gmshrunner.pyc" +Install file: "debian/tmp3/posix/escriptcore/py/heat.pyc" as "debian/stage3/esys/escriptcore/heat.pyc" +Install file: "debian/tmp3/posix/escriptcore/py/levelset.pyc" as "debian/stage3/esys/escriptcore/levelset.pyc" +Install file: "debian/tmp3/posix/escriptcore/py/linearPDEs.pyc" as "debian/stage3/esys/escriptcore/linearPDEs.pyc" +Install file: "debian/tmp3/posix/escriptcore/py/modelframe.pyc" as "debian/stage3/esys/escriptcore/modelframe.pyc" +Install file: "debian/tmp3/posix/escriptcore/py/flows.pyc" as "debian/stage3/esys/escriptcore/flows.pyc" +Install file: "debian/tmp3/posix/escriptcore/py/faultsystems.pyc" as "debian/stage3/esys/escriptcore/faultsystems.pyc" +Install file: "debian/tmp3/posix/escriptcore/py/nonlinearPDE.pyc" as "debian/stage3/esys/escriptcore/nonlinearPDE.pyc" +Install file: "debian/tmp3/posix/escriptcore/py/mountains.pyc" as "debian/stage3/esys/escriptcore/mountains.pyc" +Install file: "debian/tmp3/posix/escriptcore/py/pdetools.pyc" as "debian/stage3/esys/escriptcore/pdetools.pyc" +Install file: "debian/tmp3/posix/escriptcore/py/rheologies.pyc" as "debian/stage3/esys/escriptcore/rheologies.pyc" +Install file: "debian/tmp3/posix/escriptcore/py/runmodel.pyc" as "debian/stage3/esys/escriptcore/runmodel.pyc" +Install file: "debian/tmp3/posix/escriptcore/py/models.pyc" as "debian/stage3/esys/escriptcore/models.pyc" +Install file: "debian/tmp3/posix/escriptcore/py/splitworld.pyc" as "debian/stage3/esys/escriptcore/splitworld.pyc" +Install file: "debian/tmp3/posix/escriptcore/py/start.pyc" as "debian/stage3/esys/escriptcore/start.pyc" +Install file: "debian/tmp3/posix/escriptcore/py/symbolic/__init__.pyc" as "debian/stage3/esys/escriptcore/symbolic/__init__.pyc" +Install file: "debian/tmp3/posix/escriptcore/py/symbolic/evaluator.pyc" as "debian/stage3/esys/escriptcore/symbolic/evaluator.pyc" +Install file: "debian/tmp3/posix/escriptcore/py/symbolic/functions.pyc" as "debian/stage3/esys/escriptcore/symbolic/functions.pyc" +Install file: "debian/tmp3/posix/escriptcore/py/symbolic/pretty.pyc" as "debian/stage3/esys/escriptcore/symbolic/pretty.pyc" +Install file: "debian/tmp3/posix/escriptcore/py/symbolic/symbol.pyc" as "debian/stage3/esys/escriptcore/symbolic/symbol.pyc" +Install file: "debian/tmp3/posix/escriptcore/py/symbolic/symconstants.pyc" as "debian/stage3/esys/escriptcore/symbolic/symconstants.pyc" +Install file: "debian/tmp3/posix/escriptcore/py/symbolic/utils.pyc" as "debian/stage3/esys/escriptcore/symbolic/utils.pyc" +Install file: "debian/tmp3/posix/escriptcore/py/testing.pyc" as "debian/stage3/esys/escriptcore/testing.pyc" +Install file: "debian/tmp3/posix/escriptcore/py/unitsSI.pyc" as "debian/stage3/esys/escriptcore/unitsSI.pyc" +Install file: "debian/tmp3/posix/escriptcore/py/utestselect.pyc" as "debian/stage3/esys/escriptcore/utestselect.pyc" +Install file: "debian/tmp3/posix/escriptcore/py/util.pyc" as "debian/stage3/esys/escriptcore/util.pyc" +Install file: "debian/tmp3/posix/finley/py/__init__.pyc" as "debian/stage3/esys/finley/__init__.pyc" +Install file: "debian/tmp3/posix/finley/py/factorywrappers.pyc" as "debian/stage3/esys/finley/factorywrappers.pyc" +ember index... Generating file index... Generating file member index... Generating example index... @@ -25004,11 +25039,10 @@ Install file: "debian/tmp3/posix/modellib/geometry.pyc" as "debian/stage3/esys/modellib/geometry.pyc" Install file: "debian/tmp3/posix/modellib/input.pyc" as "debian/stage3/esys/modellib/input.pyc" Install file: "debian/tmp3/posix/modellib/materials.pyc" as "debian/stage3/esys/modellib/materials.pyc" -Install file: "debian/tmp3/posix/modellib/mechanics.pyc" as "debian/stage3/esys/modellib/mechanics.pyc" Install file: "debian/tmp3/posix/modellib/probe.pyc" as "debian/stage3/esys/modellib/probe.pyc" +Install file: "debian/tmp3/posix/modellib/mechanics.pyc" as "debian/stage3/esys/modellib/mechanics.pyc" Install file: "debian/tmp3/posix/modellib/temperature.pyc" as "debian/stage3/esys/modellib/temperature.pyc" Install file: "debian/tmp3/posix/modellib/visualization.pyc" as "debian/stage3/esys/modellib/visualization.pyc" -Install file: "debian/tmp3/posix/pycad/Triangle.pyc" as "debian/stage3/esys/pycad/Triangle.pyc" Install file: "debian/tmp3/posix/pycad/__init__.pyc" as "debian/stage3/esys/pycad/__init__.pyc" Install file: "debian/tmp3/posix/pycad/design.pyc" as "debian/stage3/esys/pycad/design.pyc" Install file: "debian/tmp3/posix/pycad/extras.pyc" as "debian/stage3/esys/pycad/extras.pyc" @@ -25016,8 +25050,9 @@ Install file: "debian/tmp3/posix/pycad/primitives.pyc" as "debian/stage3/esys/pycad/primitives.pyc" Install file: "debian/tmp3/posix/pycad/shapes.pyc" as "debian/stage3/esys/pycad/shapes.pyc" Install file: "debian/tmp3/posix/pycad/transformations.pyc" as "debian/stage3/esys/pycad/transformations.pyc" -Install file: "debian/tmp3/posix/ripley/py/MultiResolutionDomain.pyc" as "debian/stage3/esys/ripley/MultiResolutionDomain.pyc" +Install file: "debian/tmp3/posix/pycad/Triangle.pyc" as "debian/stage3/esys/pycad/Triangle.pyc" Install file: "debian/tmp3/posix/ripley/py/__init__.pyc" as "debian/stage3/esys/ripley/__init__.pyc" +Install file: "debian/tmp3/posix/ripley/py/MultiResolutionDomain.pyc" as "debian/stage3/esys/ripley/MultiResolutionDomain.pyc" Install file: "debian/tmp3/posix/speckley/py/__init__.pyc" as "debian/stage3/esys/speckley/__init__.pyc" Install file: "debian/tmp3/posix/weipa/py/__init__.pyc" as "debian/stage3/esys/weipa/__init__.pyc" /usr/bin/python3 doc/sphinx_api/genrst.py /build/reproducible-path/python-escript-5.6/debian/stage3 esys /build/reproducible-path/python-escript-5.6/debian/tmp3/sphinx_int && sphinx-build -v -E --color -b html -d /build/reproducible-path/python-escript-5.6/debian/tmp3/sphinx_int/tree -c doc/sphinx_api -D mathjax_path=file:///usr/share/javascript/mathjax/MathJax.js /build/reproducible-path/python-escript-5.6/debian/tmp3/sphinx_int /build/reproducible-path/python-escript-5.6/debian/stage3/release/doc/sphinx_api @@ -25311,16 +25346,23 @@ shapes transformations -------------esys.pycad -..esys.pycad.transformations.pyc -..esys.pycad.transformations -..esys.pycad.shapes.pyc -..esys.pycad.shapes -..esys.pycad.primitives.pyc -..esys.pycad.primitives -..esys.pycad.extras.pyc -..esys.pycad.extras -esys.pycad.extras -Starting dump on esys.pycad.extras with ignore at [] +..esys.pycad.Triangle.pyc +..esys.pycad.Triangle +esys.pycad.Triangle +Starting dump on esys.pycad.Triangle with ignore at [] + Arc + BSpline + BezierCurve + CurveLoop + Design + Line + PlaneSurface + Point + PropertySet + RuledSurface + Spline + SurfaceLoop + Volume __author__ __builtins__ __cached__ @@ -25333,12 +25375,21 @@ __package__ __spec__ __url__ - buildFreeSurface - buildLayer + design division - layer_cake + getMPIRankWorld + getMPIWorldMax + glob + math + os print_function - pycad + tempfile +..esys.pycad.transformations.pyc +..esys.pycad.transformations +..esys.pycad.shapes.pyc +..esys.pycad.shapes +..esys.pycad.primitives.pyc +..esys.pycad.primitives ..esys.pycad.gmsh.pyc ..esys.pycad.gmsh esys.pycad.gmsh @@ -25378,19 +25429,10 @@ os print_function tempfile -..esys.pycad.design.pyc -..esys.pycad.design -esys.pycad.design -Starting dump on esys.pycad.design with ignore at [] - AbstractDesign - Manifold1D - Manifold2D - Manifold3D - Point - Primitive - PropertySet - ReversePrimitive - TagMap +..esys.pycad.extras.pyc +..esys.pycad.extras +esys.pycad.extras +Starting dump on esys.pycad.extras with ignore at [] __author__ __builtins__ __cached__ @@ -25403,28 +25445,25 @@ __package__ __spec__ __url__ + buildFreeSurface + buildLayer division - minidom - os + layer_cake print_function - tempfile -..esys.pycad.Triangle.pyc -..esys.pycad.Triangle -esys.pycad.Triangle -Starting dump on esys.pycad.Triangle with ignore at [] - Arc - BSpline - BezierCurve - CurveLoop - Design - Line - PlaneSurface + pycad +..esys.pycad.design.pyc +..esys.pycad.design +esys.pycad.design +Starting dump on esys.pycad.design with ignore at [] + AbstractDesign + Manifold1D + Manifold2D + Manifold3D Point + Primitive PropertySet - RuledSurface - Spline - SurfaceLoop - Volume + ReversePrimitive + TagMap __author__ __builtins__ __cached__ @@ -25437,12 +25476,8 @@ __package__ __spec__ __url__ - design division - getMPIRankWorld - getMPIWorldMax - glob - math + minidom os print_function tempfile @@ -25489,34 +25524,6 @@ os print_function saveVTK -..esys.modellib.temperature.pyc -..esys.modellib.temperature -esys.modellib.temperature -Starting dump on esys.modellib.temperature with ignore at [] - Data - IterationDivergenceError - Model - TemperatureAdvection - __builtins__ - __cached__ - __copyright__ - __doc__ - __file__ - __license__ - __loader__ - __name__ - __package__ - __spec__ - __url__ - division - grad - inf - inner - length - lpde - numpy - print_function - sup ..esys.modellib.probe.pyc ..esys.modellib.probe esys.modellib.probe @@ -25675,6 +25682,34 @@ wherePositive whereZero zeros +..esys.modellib.temperature.pyc +..esys.modellib.temperature +esys.modellib.temperature +Starting dump on esys.modellib.temperature with ignore at [] + Data + IterationDivergenceError + Model + TemperatureAdvection + __builtins__ + __cached__ + __copyright__ + __doc__ + __file__ + __license__ + __loader__ + __name__ + __package__ + __spec__ + __url__ + division + grad + inf + inner + length + lpde + numpy + print_function + sup ..esys.modellib.mechanics.pyc ..esys.modellib.mechanics esys.modellib.mechanics @@ -27607,18 +27642,21 @@ print_function sys time -..esys.downunder.regularizations.pyc -..esys.downunder.regularizations ..esys.downunder.minimizers.pyc ..esys.downunder.minimizers +..esys.downunder.regularizations.pyc +..esys.downunder.regularizations ..esys.downunder.mappings.pyc ..esys.downunder.mappings -..esys.downunder.magtel2d.pyc -..esys.downunder.magtel2d -esys.downunder.magtel2d -Starting dump on esys.downunder.magtel2d with ignore at [] - HAVE_FINLEY - MT_2D +..esys.downunder.inversions.pyc +..esys.downunder.inversions +..esys.downunder.inversioncostfunctions.pyc +..esys.downunder.inversioncostfunctions +..esys.downunder.magtel1d.pyc +..esys.downunder.magtel1d +esys.downunder.magtel1d +Starting dump on esys.downunder.magtel1d with ignore at [] + MT_1D __author__ __builtins__ __cached__ @@ -27633,14 +27671,15 @@ __url__ cmath division - escript - finley - math - mt1d -About to dump mt1d(esys.downunder.magtel1d) -esys.downunder.magtel1d -Starting dump on esys.downunder.magtel1d with ignore at [] - MT_1D + numpy + print_function + sys +..esys.downunder.magtel2d.pyc +..esys.downunder.magtel2d +esys.downunder.magtel2d +Starting dump on esys.downunder.magtel2d with ignore at [] + HAVE_FINLEY + MT_2D __author__ __builtins__ __cached__ @@ -27655,10 +27694,10 @@ __url__ cmath division - numpy - print_function - sys -Dump of esys.downunder.magtel2d complete + escript + finley + math + mt1d numpy os pde @@ -27667,32 +27706,32 @@ sys types weipa -..esys.downunder.magtel1d.pyc -..esys.downunder.magtel1d -esys.downunder.magtel1d -Starting dump on esys.downunder.magtel1d with ignore at [] - MT_1D - __author__ +..esys.downunder.dcresistivityforwardmodeling.pyc +..esys.downunder.dcresistivityforwardmodeling +esys.downunder.dcresistivityforwardmodeling +Starting dump on esys.downunder.dcresistivityforwardmodeling with ignore at [] + DcResistivityForward + DipoleDipoleSurvey + LinearPDE + Locator + PoleDipoleSurvey + PolePoleSurvey + SchlumbergerSurvey + WennerSurvey __builtins__ __cached__ - __copyright__ __doc__ __file__ - __license__ __loader__ __name__ __package__ __spec__ - __url__ - cmath division - numpy + es + pi print_function - sys -..esys.downunder.inversions.pyc -..esys.downunder.inversions -..esys.downunder.inversioncostfunctions.pyc -..esys.downunder.inversioncostfunctions + saveSilo + xrange ..esys.downunder.domainbuilder.pyc ..esys.downunder.domainbuilder esys.downunder.domainbuilder @@ -27722,32 +27761,6 @@ logging np print_function -..esys.downunder.dcresistivityforwardmodeling.pyc -..esys.downunder.dcresistivityforwardmodeling -esys.downunder.dcresistivityforwardmodeling -Starting dump on esys.downunder.dcresistivityforwardmodeling with ignore at [] - DcResistivityForward - DipoleDipoleSurvey - LinearPDE - Locator - PoleDipoleSurvey - PolePoleSurvey - SchlumbergerSurvey - WennerSurvey - __builtins__ - __cached__ - __doc__ - __file__ - __loader__ - __name__ - __package__ - __spec__ - division - es - pi - print_function - saveSilo - xrange ..esys.downunder.datasources.pyc ..esys.downunder.datasources ..esys.downunder.costfunctions.pyc @@ -28965,32 +28978,6 @@ wherePositive whereZero zeros -..esys.downunder.forwardmodels.magnetotelluric2d.pyc -..esys.downunder.forwardmodels.magnetotelluric2d -esys.downunder.forwardmodels.magnetotelluric2d -Starting dump on esys.downunder.forwardmodels.magnetotelluric2d with ignore at [] - ForwardModel - MT2DBase - MT2DModelTEMode - MT2DModelTMMode - __all__ - __builtins__ - __cached__ - __copyright__ - __doc__ - __file__ - __license__ - __loader__ - __name__ - __package__ - __spec__ - __url__ - coords - division - escript - lpde - math - print_function ..esys.downunder.forwardmodels.pressure.pyc ..esys.downunder.forwardmodels.pressure esys.downunder.forwardmodels.pressure @@ -29154,6 +29141,32 @@ wherePositive whereZero zeros +..esys.downunder.forwardmodels.magnetotelluric2d.pyc +..esys.downunder.forwardmodels.magnetotelluric2d +esys.downunder.forwardmodels.magnetotelluric2d +Starting dump on esys.downunder.forwardmodels.magnetotelluric2d with ignore at [] + ForwardModel + MT2DBase + MT2DModelTEMode + MT2DModelTMMode + __all__ + __builtins__ + __cached__ + __copyright__ + __doc__ + __file__ + __license__ + __loader__ + __name__ + __package__ + __spec__ + __url__ + coords + division + escript + lpde + math + print_function ..esys.downunder.forwardmodels.magnetic.pyc ..esys.downunder.forwardmodels.magnetic esys.downunder.forwardmodels.magnetic @@ -30062,12 +30075,12 @@ whereZero zeros -------------esys.downunder.apps -..esys.downunder.apps.gravityModels.pyc -..esys.downunder.apps.gravityModels -..esys.downunder.apps.magneticModels.pyc -..esys.downunder.apps.magneticModels ..esys.downunder.apps.seismicModels.pyc ..esys.downunder.apps.seismicModels +..esys.downunder.apps.magneticModels.pyc +..esys.downunder.apps.magneticModels +..esys.downunder.apps.gravityModels.pyc +..esys.downunder.apps.gravityModels ..esys.downunder.apps.dcModels.pyc ..esys.downunder.apps.dcModels ..esys.downunder.apps.MTModels.pyc @@ -30208,7 +30221,6 @@ RETURNS: -------- -/build/reproducible-path/python-escript-5.6/debian/tmp3/sphinx_int/esys.downunder.magtel2d.rst:29: WARNING: toctree contains reference to nonexisting document 'esys.downunder.magtel2d.mt1d' /build/reproducible-path/python-escript-5.6/debian/stage3/esys/modellib/flow.py:docstring of esys.modellib.flow.SteadyIncompressibleFlow:1: WARNING: Inline emphasis start-string without end-string. /build/reproducible-path/python-escript-5.6/debian/stage3/esys/modellib/flow.py:docstring of esys.modellib.flow.SteadyIncompressibleFlow:2: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/python-escript-5.6/debian/stage3/esys/modellib/flow.py:docstring of esys.modellib.flow.SteadyIncompressibleFlow:7: WARNING: Inline emphasis start-string without end-string. @@ -30311,7 +30323,7 @@ copying extra files... done dumping search index in English (code: en)... done dumping object inventory... done -build succeeded, 84 warnings. +build succeeded, 83 warnings. The HTML pages are in debian/stage3/release/doc/sphinx_api. scons: done building targets. @@ -30357,7 +30369,7 @@ [GCC 10.2.1 20210110] Building with the following additional flags from debian: [['cpp_flags', '-Wdate-time -D_FORTIFY_SOURCE=2'], ['cxx_extra', '-g -O2 -fdebug-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized'], ['ld_extra', '-Wl,-z,relro -Wl,-z,now']] Using options in debian/sid_options_mpi.py. -/bin/sh: 1: svnversion: not found +/bin/sh: line 1: svnversion: command not found Checking whether the C++ compiler works... yes Checking for C++ function gethostname()... yes Checking for C++ header file byteswap.h... yes @@ -30377,7 +30389,7 @@ Checking for C++ library siloh5... yes Checking for C++ library mpi_cxx... yes Checking for C++ library boost_iostreams... yes -Matplotlib created a temporary config/cache directory at /tmp/matplotlib-wxa74vb7 because the default path (/nonexistent/first-build/.config/matplotlib) is not a writable directory; it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing. +Matplotlib created a temporary config/cache directory at /tmp/matplotlib-ckz32wrq because the default path (/nonexistent/second-build/.config/matplotlib) is not a writable directory; it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing. Traceback (most recent call last): File "", line 1, in ImportError: cannot import name 'griddata' from 'matplotlib.mlab' (/usr/lib/python3/dist-packages/matplotlib/mlab.py) @@ -35091,7 +35103,7 @@ rm -f utest.sh make[1]: Leaving directory '/build/reproducible-path/python-escript-5.6' dh_auto_test -O-v - rm -fr -- /tmp/dh-xdg-rundir-XpYhtbzv + rm -fr -- /tmp/dh-xdg-rundir-_M8b9hPF create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary dh binary -v @@ -35138,24 +35150,24 @@ install -p -m0644 debian/copyright debian/python3-escript-mpi/usr/share/doc/python3-escript-mpi/copyright install -p -m0644 debian/copyright debian/python-escript-doc/usr/share/doc/python-escript-doc/copyright install -d debian/python-escript-doc/usr/share/doc-base/ - install -p -m0644 debian/python-escript-doc.doc-base.2 debian/python-escript-doc/usr/share/doc-base/escript-cookbook install -p -m0644 debian/python-escript-doc.doc-base.1 debian/python-escript-doc/usr/share/doc-base/escript-install-guide + install -p -m0644 debian/python-escript-doc.doc-base.2 debian/python-escript-doc/usr/share/doc-base/escript-cookbook install -p -m0644 debian/python-escript-doc.doc-base.6 debian/python-escript-doc/usr/share/doc-base/escript-python-api - install -p -m0644 debian/python-escript-doc.doc-base.3 debian/python-escript-doc/usr/share/doc-base/escript-user-guide install -p -m0644 debian/python-escript-doc.doc-base.4 debian/python-escript-doc/usr/share/doc-base/escript-inversion-guide install -p -m0644 debian/python-escript-doc.doc-base.5 debian/python-escript-doc/usr/share/doc-base/escript-c\+\+-side + install -p -m0644 debian/python-escript-doc.doc-base.3 debian/python-escript-doc/usr/share/doc-base/escript-user-guide dh_sphinxdoc -O-v - ln -sf ../../../../javascript/sphinxdoc/1.0/language_data.js debian/python-escript-doc/usr/share/doc/python-escript-doc/python_html/_static/language_data.js ln -sf ../../../../javascript/sphinxdoc/1.0/searchtools.js debian/python-escript-doc/usr/share/doc/python-escript-doc/python_html/_static/searchtools.js + ln -sf ../../../../javascript/sphinxdoc/1.0/language_data.js debian/python-escript-doc/usr/share/doc/python-escript-doc/python_html/_static/language_data.js ln -sf ../../../../javascript/sphinxdoc/1.0/underscore.js debian/python-escript-doc/usr/share/doc/python-escript-doc/python_html/_static/underscore.js - ln -sf ../../../../javascript/sphinxdoc/1.0/sidebar.js debian/python-escript-doc/usr/share/doc/python-escript-doc/python_html/_static/sidebar.js - ln -sf ../../../../javascript/sphinxdoc/1.0/jquery.js debian/python-escript-doc/usr/share/doc/python-escript-doc/python_html/_static/jquery.js ln -sf ../../../../javascript/sphinxdoc/1.0/doctools.js debian/python-escript-doc/usr/share/doc/python-escript-doc/python_html/_static/doctools.js + ln -sf ../../../../javascript/sphinxdoc/1.0/jquery.js debian/python-escript-doc/usr/share/doc/python-escript-doc/python_html/_static/jquery.js + ln -sf ../../../../javascript/sphinxdoc/1.0/sidebar.js debian/python-escript-doc/usr/share/doc/python-escript-doc/python_html/_static/sidebar.js (grep -a -s -v sphinxdoc:Depends debian/python-escript-doc.substvars; echo "sphinxdoc:Depends=libjs-sphinxdoc (>= 2.0)") > debian/python-escript-doc.substvars.new mv debian/python-escript-doc.substvars.new debian/python-escript-doc.substvars - (grep -a -s -v sphinxdoc:Depends debian/python-escript-doc.substvars; echo "sphinxdoc:Depends=libjs-sphinxdoc (>= 2.0), libjs-sphinxdoc (>= 2.4.3-5~)") > debian/python-escript-doc.substvars.new + (grep -a -s -v sphinxdoc:Depends debian/python-escript-doc.substvars; echo "sphinxdoc:Depends=libjs-sphinxdoc (>= 1.8), libjs-sphinxdoc (>= 2.0)") > debian/python-escript-doc.substvars.new mv debian/python-escript-doc.substvars.new debian/python-escript-doc.substvars - (grep -a -s -v sphinxdoc:Depends debian/python-escript-doc.substvars; echo "sphinxdoc:Depends=libjs-sphinxdoc (>= 1.0), libjs-sphinxdoc (>= 2.0), libjs-sphinxdoc (>= 2.4.3-5~)") > debian/python-escript-doc.substvars.new + (grep -a -s -v sphinxdoc:Depends debian/python-escript-doc.substvars; echo "sphinxdoc:Depends=libjs-sphinxdoc (>= 1.8), libjs-sphinxdoc (>= 2.0), libjs-sphinxdoc (>= 2.4.3-5~)") > debian/python-escript-doc.substvars.new mv debian/python-escript-doc.substvars.new debian/python-escript-doc.substvars (grep -a -s -v sphinxdoc:Depends debian/python-escript-doc.substvars; echo "sphinxdoc:Depends=libjs-sphinxdoc (>= 1.0), libjs-sphinxdoc (>= 1.8), libjs-sphinxdoc (>= 2.0), libjs-sphinxdoc (>= 2.4.3-5~)") > debian/python-escript-doc.substvars.new mv debian/python-escript-doc.substvars.new debian/python-escript-doc.substvars @@ -35166,10 +35178,10 @@ dh_installchangelogs debian/changelog.trivial install -p -m0644 debian/changelog debian/python3-escript/usr/share/doc/python3-escript/changelog.Debian install -p -m0644 debian/changelog.trivial debian/python3-escript/usr/share/doc/python3-escript/changelog - install -p -m0644 debian/changelog debian/python3-escript-mpi/usr/share/doc/python3-escript-mpi/changelog.Debian - install -p -m0644 debian/changelog.trivial debian/python3-escript-mpi/usr/share/doc/python3-escript-mpi/changelog install -p -m0644 debian/changelog debian/python-escript-doc/usr/share/doc/python-escript-doc/changelog.Debian install -p -m0644 debian/changelog.trivial debian/python-escript-doc/usr/share/doc/python-escript-doc/changelog + install -p -m0644 debian/changelog debian/python3-escript-mpi/usr/share/doc/python3-escript-mpi/changelog.Debian + install -p -m0644 debian/changelog.trivial debian/python3-escript-mpi/usr/share/doc/python3-escript-mpi/changelog make[1]: Leaving directory '/build/reproducible-path/python-escript-5.6' dh_installexamples -O-v dh_installexamples: warning: Cannot auto-detect main package for python-escript-doc. If the default is wrong, please use --doc-main-package @@ -35182,10 +35194,10 @@ install -p -m0644 ./debian/stage3M/run-escript3-mpi.man debian/python3-escript-mpi/usr/share/man/man1/run-escript3-mpi.1 man-recode --to-code UTF-8 --suffix .dh-new debian/python3-escript/usr/share/man/man1/run-escript3.1 man-recode --to-code UTF-8 --suffix .dh-new debian/python3-escript-mpi/usr/share/man/man1/run-escript3-mpi.1 - mv debian/python3-escript-mpi/usr/share/man/man1/run-escript3-mpi.1.dh-new debian/python3-escript-mpi/usr/share/man/man1/run-escript3-mpi.1 - chmod 0644 -- debian/python3-escript-mpi/usr/share/man/man1/run-escript3-mpi.1 mv debian/python3-escript/usr/share/man/man1/run-escript3.1.dh-new debian/python3-escript/usr/share/man/man1/run-escript3.1 chmod 0644 -- debian/python3-escript/usr/share/man/man1/run-escript3.1 + mv debian/python3-escript-mpi/usr/share/man/man1/run-escript3-mpi.1.dh-new debian/python3-escript-mpi/usr/share/man/man1/run-escript3-mpi.1 + chmod 0644 -- debian/python3-escript-mpi/usr/share/man/man1/run-escript3-mpi.1 rm -f debian/python-escript-doc.debhelper.log debian/python3-escript-mpi.debhelper.log debian/python3-escript.debhelper.log debian/rules override_dh_python3 make[1]: Entering directory '/build/reproducible-path/python-escript-5.6' @@ -35202,18 +35214,18 @@ install -p -m0644 debian/python-escript-doc.lintian-overrides debian/python-escript-doc/usr/share/lintian/overrides/python-escript-doc dh_perl -O-v dh_link -O-v - rm -f debian/python-escript-doc/usr/share/doc/python-escript-doc/python_html/_static/language_data.js - ln -s ../../../../javascript/sphinxdoc/1.0/language_data.js debian/python-escript-doc/usr/share/doc/python-escript-doc/python_html/_static/language_data.js rm -f debian/python-escript-doc/usr/share/doc/python-escript-doc/python_html/_static/searchtools.js ln -s ../../../../javascript/sphinxdoc/1.0/searchtools.js debian/python-escript-doc/usr/share/doc/python-escript-doc/python_html/_static/searchtools.js + rm -f debian/python-escript-doc/usr/share/doc/python-escript-doc/python_html/_static/language_data.js + ln -s ../../../../javascript/sphinxdoc/1.0/language_data.js debian/python-escript-doc/usr/share/doc/python-escript-doc/python_html/_static/language_data.js rm -f debian/python-escript-doc/usr/share/doc/python-escript-doc/python_html/_static/underscore.js ln -s ../../../../javascript/sphinxdoc/1.0/underscore.js debian/python-escript-doc/usr/share/doc/python-escript-doc/python_html/_static/underscore.js - rm -f debian/python-escript-doc/usr/share/doc/python-escript-doc/python_html/_static/sidebar.js - ln -s ../../../../javascript/sphinxdoc/1.0/sidebar.js debian/python-escript-doc/usr/share/doc/python-escript-doc/python_html/_static/sidebar.js - rm -f debian/python-escript-doc/usr/share/doc/python-escript-doc/python_html/_static/jquery.js - ln -s ../../../../javascript/sphinxdoc/1.0/jquery.js debian/python-escript-doc/usr/share/doc/python-escript-doc/python_html/_static/jquery.js rm -f debian/python-escript-doc/usr/share/doc/python-escript-doc/python_html/_static/doctools.js ln -s ../../../../javascript/sphinxdoc/1.0/doctools.js debian/python-escript-doc/usr/share/doc/python-escript-doc/python_html/_static/doctools.js + rm -f debian/python-escript-doc/usr/share/doc/python-escript-doc/python_html/_static/jquery.js + ln -s ../../../../javascript/sphinxdoc/1.0/jquery.js debian/python-escript-doc/usr/share/doc/python-escript-doc/python_html/_static/jquery.js + rm -f debian/python-escript-doc/usr/share/doc/python-escript-doc/python_html/_static/sidebar.js + ln -s ../../../../javascript/sphinxdoc/1.0/sidebar.js debian/python-escript-doc/usr/share/doc/python-escript-doc/python_html/_static/sidebar.js dh_strip_nondeterminism -O-v Using 1617812251 as canonical time Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classdudley_1_1DudleyDomain.png using File::StripNondeterminism::handlers::png @@ -35228,42 +35240,15 @@ Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/structpaso_1_1MUMPS__Handler_3_01cplx__t_01_4.png using File::StripNondeterminism::handlers::png Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/structpaso_1_1MUMPS__Handler.png using File::StripNondeterminism::handlers::png Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/structpaso_1_1LinearSystem.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/closed.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classweipa_1_1WeipaException.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classweipa_1_1SpeckleyNodes.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classweipa_1_1SpeckleyElements.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classweipa_1_1SpeckleyDomain.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classweipa_1_1RipleyNodes.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classweipa_1_1RipleyElements.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classweipa_1_1RipleyDomain.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classweipa_1_1NodeData.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1FunctionSpaceException.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1EsysException.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1DomainException.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1DataTagged.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1DataReady.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1DataLazy.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1DataExpanded.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1DataException.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1DataEmpty.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classweipa_1_1FinleyNodes.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classweipa_1_1FinleyElements.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classweipa_1_1FinleyDomain.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classweipa_1_1ElementData.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classweipa_1_1DomainChunk.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classspeckley_1_1WaveAssembler3D.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classspeckley_1_1WaveAssembler2D.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classspeckley_1_1SpeckleyException.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classspeckley_1_1SpeckleyDomain.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1SystemMatrixException.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1SubWorld.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1SplitWorldException.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1NullDomain.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1NotImplementedError.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1NonReducedVariable.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1MPIScalarReducer.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1MPIDataReducer.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1IOError.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/examples/escript_examples.tar.gz using File::StripNondeterminism::handlers::gzip + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/python_html/_static/file.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/python_html/_static/minus.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/python_html/_static/plus.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/tab_s.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/tab_h.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/tab_b.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/tab_a.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/sync_on.png using File::StripNondeterminism::handlers::png Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/structpaso_1_1Function.png using File::StripNondeterminism::handlers::png Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/splitbar.png using File::StripNondeterminism::handlers::png Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/open.png using File::StripNondeterminism::handlers::png @@ -35273,15 +35258,24 @@ Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/folderopen.png using File::StripNondeterminism::handlers::png Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/folderclosed.png using File::StripNondeterminism::handlers::png Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/doc.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classripley_1_1RipleyDomain.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classripley_1_1Rectangle.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classripley_1_1MultiRectangle.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classripley_1_1MultiBrick.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classripley_1_1LameAssembler3D.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classripley_1_1LameAssembler2D.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classripley_1_1DefaultAssembler3D.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classripley_1_1DefaultAssembler2D.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classripley_1_1Brick.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classweipa_1_1FinleyNodes.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classweipa_1_1FinleyElements.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classweipa_1_1FinleyDomain.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classweipa_1_1ElementData.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classweipa_1_1DomainChunk.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classspeckley_1_1WaveAssembler3D.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classspeckley_1_1WaveAssembler2D.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classspeckley_1_1SpeckleyException.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classspeckley_1_1SpeckleyDomain.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classripley_1_1AbstractAssembler.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classpaso_1_1TransportProblem.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classpaso_1_1SystemMatrix.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classpaso_1_1PasoException.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classfinley_1_1FinleyException.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classfinley_1_1FinleyDomain.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1ValueError.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1TransportProblemException.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1TestDomain.png using File::StripNondeterminism::handlers::png Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classspeckley_1_1Rectangle.png using File::StripNondeterminism::handlers::png Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classspeckley_1_1DefaultAssembler3D.png using File::StripNondeterminism::handlers::png Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classspeckley_1_1DefaultAssembler2D.png using File::StripNondeterminism::handlers::png @@ -35291,6 +35285,33 @@ Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classripley_1_1WaveAssembler2D.png using File::StripNondeterminism::handlers::png Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classripley_1_1SystemMatrix.png using File::StripNondeterminism::handlers::png Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classripley_1_1RipleyException.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classripley_1_1RipleyDomain.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classripley_1_1Rectangle.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classripley_1_1MultiRectangle.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classripley_1_1MultiBrick.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classripley_1_1LameAssembler3D.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classripley_1_1LameAssembler2D.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classripley_1_1DefaultAssembler3D.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classripley_1_1DefaultAssembler2D.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classripley_1_1Brick.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/closed.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classweipa_1_1WeipaException.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classweipa_1_1SpeckleyNodes.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classweipa_1_1SpeckleyElements.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classweipa_1_1SpeckleyDomain.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classweipa_1_1RipleyNodes.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classweipa_1_1RipleyElements.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classweipa_1_1RipleyDomain.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classweipa_1_1NodeData.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1SystemMatrixException.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1SubWorld.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1SplitWorldException.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1NullDomain.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1NotImplementedError.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1NonReducedVariable.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1MPIScalarReducer.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1MPIDataReducer.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1IOError.png using File::StripNondeterminism::handlers::png Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1DataConstant.png using File::StripNondeterminism::handlers::png Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1DataAbstract.png using File::StripNondeterminism::handlers::png Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1AssertException.png using File::StripNondeterminism::handlers::png @@ -35300,57 +35321,48 @@ Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1AbstractDomain.png using File::StripNondeterminism::handlers::png Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1AbstractContinuousDomain.png using File::StripNondeterminism::handlers::png Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classdudley_1_1DudleyException.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classripley_1_1AbstractAssembler.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classpaso_1_1TransportProblem.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classpaso_1_1SystemMatrix.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classpaso_1_1PasoException.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classfinley_1_1FinleyException.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classfinley_1_1FinleyDomain.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1ValueError.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1TransportProblemException.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1TestDomain.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/examples/escript_examples.tar.gz using File::StripNondeterminism::handlers::gzip - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/python_html/_static/file.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/python_html/_static/minus.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/python_html/_static/plus.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/tab_s.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/tab_h.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/tab_b.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/tab_a.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/sync_on.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1FunctionSpaceException.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1EsysException.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1DomainException.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1DataTagged.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1DataReady.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1DataLazy.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1DataExpanded.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1DataException.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1DataEmpty.png using File::StripNondeterminism::handlers::png dh_compress -O-v cd debian/python3-escript cd debian/python3-escript-mpi cd debian/python-escript-doc - chmod a-x usr/share/doc/python3-escript-mpi/changelog usr/share/doc/python3-escript-mpi/changelog.Debian usr/share/man/man1/run-escript3-mpi.1 - gzip -9nf usr/share/doc/python3-escript-mpi/changelog usr/share/doc/python3-escript-mpi/changelog.Debian usr/share/man/man1/run-escript3-mpi.1 chmod a-x usr/share/doc/python3-escript/changelog usr/share/doc/python3-escript/changelog.Debian usr/share/man/man1/run-escript3.1 + chmod a-x usr/share/doc/python3-escript-mpi/changelog usr/share/doc/python3-escript-mpi/changelog.Debian usr/share/man/man1/run-escript3-mpi.1 gzip -9nf usr/share/doc/python3-escript/changelog usr/share/doc/python3-escript/changelog.Debian usr/share/man/man1/run-escript3.1 + gzip -9nf usr/share/doc/python3-escript-mpi/changelog usr/share/doc/python3-escript-mpi/changelog.Debian usr/share/man/man1/run-escript3-mpi.1 cd '/build/reproducible-path/python-escript-5.6' cd '/build/reproducible-path/python-escript-5.6' chmod a-x usr/share/doc/python-escript-doc/changelog usr/share/doc/python-escript-doc/changelog.Debian usr/share/doc/python-escript-doc/cookbook.pdf usr/share/doc/python-escript-doc/install.pdf usr/share/doc/python-escript-doc/inversion.pdf usr/share/doc/python-escript-doc/user.pdf gzip -9nf usr/share/doc/python-escript-doc/changelog usr/share/doc/python-escript-doc/changelog.Debian usr/share/doc/python-escript-doc/cookbook.pdf usr/share/doc/python-escript-doc/install.pdf usr/share/doc/python-escript-doc/inversion.pdf usr/share/doc/python-escript-doc/user.pdf cd '/build/reproducible-path/python-escript-5.6' dh_fixperms -O-v - find debian/python3-escript -true -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0 find debian/python3-escript-mpi -true -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0 find debian/python-escript-doc -true -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0 + find debian/python3-escript -true -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0 find debian/python3-escript-mpi ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/python3-escript ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s - find debian/python3-escript/usr/share/doc -type f -a -true -a ! -regex 'debian/python3-escript/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/python3-escript-mpi/usr/share/doc -type f -a -true -a ! -regex 'debian/python3-escript-mpi/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 - find debian/python-escript-doc ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s - find debian/python3-escript/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 - find debian/python3-escript/usr/share/man debian/python3-escript/usr/share/lintian/overrides -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/python3-escript-mpi/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 + find debian/python3-escript/usr/share/doc -type f -a -true -a ! -regex 'debian/python3-escript/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/python3-escript-mpi/usr/share/man debian/python3-escript-mpi/usr/share/lintian/overrides -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 + find debian/python3-escript-mpi -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 + find debian/python3-escript/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 + find debian/python-escript-doc ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s + find debian/python3-escript/usr/share/man debian/python3-escript/usr/share/lintian/overrides -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 + find debian/python3-escript-mpi/usr/bin -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod a+x + find debian/python3-escript-mpi/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w find debian/python3-escript -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/python3-escript/usr/bin -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod a+x - find debian/python3-escript-mpi -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/python3-escript/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w - find debian/python3-escript-mpi/usr/bin -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod a+x find debian/python-escript-doc/usr/share/doc -type f -a -true -a ! -regex 'debian/python-escript-doc/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 - find debian/python3-escript-mpi/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w find debian/python-escript-doc/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/python-escript-doc/usr/share/lintian/overrides -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/python-escript-doc -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 @@ -35384,10 +35396,10 @@ dh_dwz: warning: compressed debug information (#931891). rmdir -p --ignore-fail-on-non-empty debian/python3-escript-mpi/usr/lib/debug/.dwz/aarch64-linux-gnu dh_strip -a -O-v - install -d debian/.debhelper/python3-escript-mpi/dbgsym-root/usr/lib/debug/.build-id/42 - objcopy --only-keep-debug --compress-debug-sections debian/python3-escript-mpi/usr/lib/python3-escript-mpi/lib/libweipa.so debian/.debhelper/python3-escript-mpi/dbgsym-root/usr/lib/debug/.build-id/42/27175d662225cf0328c3d0b5a01a504ce8c12b.debug install -d debian/.debhelper/python3-escript/dbgsym-root/usr/lib/debug/.build-id/07 objcopy --only-keep-debug --compress-debug-sections debian/python3-escript/usr/lib/python3-escript/lib/libweipa.so debian/.debhelper/python3-escript/dbgsym-root/usr/lib/debug/.build-id/07/8e1715dfb569b929c45dc11ec9dd2f5779f04e.debug + install -d debian/.debhelper/python3-escript-mpi/dbgsym-root/usr/lib/debug/.build-id/42 + objcopy --only-keep-debug --compress-debug-sections debian/python3-escript-mpi/usr/lib/python3-escript-mpi/lib/libweipa.so debian/.debhelper/python3-escript-mpi/dbgsym-root/usr/lib/debug/.build-id/42/27175d662225cf0328c3d0b5a01a504ce8c12b.debug chmod 0644 -- debian/.debhelper/python3-escript-mpi/dbgsym-root/usr/lib/debug/.build-id/42/27175d662225cf0328c3d0b5a01a504ce8c12b.debug chown 0:0 -- debian/.debhelper/python3-escript-mpi/dbgsym-root/usr/lib/debug/.build-id/42/27175d662225cf0328c3d0b5a01a504ce8c12b.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-escript-mpi/usr/lib/python3-escript-mpi/lib/libweipa.so @@ -35415,13 +35427,7 @@ chmod 0644 -- debian/.debhelper/python3-escript-mpi/dbgsym-root/usr/lib/debug/.build-id/9a/047a7a5d1f90ba3dcf95bd5e68702011b94c3d.debug chown 0:0 -- debian/.debhelper/python3-escript-mpi/dbgsym-root/usr/lib/debug/.build-id/9a/047a7a5d1f90ba3dcf95bd5e68702011b94c3d.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-escript-mpi/usr/lib/python3-escript-mpi/lib/libfinley.so - chmod 0644 -- debian/.debhelper/python3-escript/dbgsym-root/usr/lib/debug/.build-id/07/8e1715dfb569b929c45dc11ec9dd2f5779f04e.debug - chown 0:0 -- debian/.debhelper/python3-escript/dbgsym-root/usr/lib/debug/.build-id/07/8e1715dfb569b929c45dc11ec9dd2f5779f04e.debug - strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-escript/usr/lib/python3-escript/lib/libweipa.so - objcopy --add-gnu-debuglink debian/.debhelper/python3-escript/dbgsym-root/usr/lib/debug/.build-id/07/8e1715dfb569b929c45dc11ec9dd2f5779f04e.debug debian/python3-escript/usr/lib/python3-escript/lib/libweipa.so objcopy --add-gnu-debuglink debian/.debhelper/python3-escript-mpi/dbgsym-root/usr/lib/debug/.build-id/9a/047a7a5d1f90ba3dcf95bd5e68702011b94c3d.debug debian/python3-escript-mpi/usr/lib/python3-escript-mpi/lib/libfinley.so - install -d debian/.debhelper/python3-escript/dbgsym-root/usr/lib/debug/.build-id/7d - objcopy --only-keep-debug --compress-debug-sections debian/python3-escript/usr/lib/python3-escript/lib/libspeckley.so debian/.debhelper/python3-escript/dbgsym-root/usr/lib/debug/.build-id/7d/22972862cd76400cf984fefd3e9b20ee00eacc.debug install -d debian/.debhelper/python3-escript-mpi/dbgsym-root/usr/lib/debug/.build-id/70 objcopy --only-keep-debug --compress-debug-sections debian/python3-escript-mpi/usr/lib/python3-escript-mpi/lib/libescriptreader.so debian/.debhelper/python3-escript-mpi/dbgsym-root/usr/lib/debug/.build-id/70/83a3fb326a620d2f2b0f9f6dcf7cb7d39c6dab.debug chmod 0644 -- debian/.debhelper/python3-escript-mpi/dbgsym-root/usr/lib/debug/.build-id/70/83a3fb326a620d2f2b0f9f6dcf7cb7d39c6dab.debug @@ -35440,12 +35446,18 @@ chown 0:0 -- debian/.debhelper/python3-escript-mpi/dbgsym-root/usr/lib/debug/.build-id/78/f02b353bf77e7ab51ffc42ad45c75eee5014d8.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-escript-mpi/usr/lib/python3-escript-mpi/lib/libdudley.so objcopy --add-gnu-debuglink debian/.debhelper/python3-escript-mpi/dbgsym-root/usr/lib/debug/.build-id/78/f02b353bf77e7ab51ffc42ad45c75eee5014d8.debug debian/python3-escript-mpi/usr/lib/python3-escript-mpi/lib/libdudley.so + chmod 0644 -- debian/.debhelper/python3-escript/dbgsym-root/usr/lib/debug/.build-id/07/8e1715dfb569b929c45dc11ec9dd2f5779f04e.debug + chown 0:0 -- debian/.debhelper/python3-escript/dbgsym-root/usr/lib/debug/.build-id/07/8e1715dfb569b929c45dc11ec9dd2f5779f04e.debug + strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-escript/usr/lib/python3-escript/lib/libweipa.so + objcopy --add-gnu-debuglink debian/.debhelper/python3-escript/dbgsym-root/usr/lib/debug/.build-id/07/8e1715dfb569b929c45dc11ec9dd2f5779f04e.debug debian/python3-escript/usr/lib/python3-escript/lib/libweipa.so install -d debian/.debhelper/python3-escript-mpi/dbgsym-root/usr/lib/debug/.build-id/73 objcopy --only-keep-debug --compress-debug-sections debian/python3-escript-mpi/usr/lib/python3-escript-mpi/esys/weipa/weipacpp.so debian/.debhelper/python3-escript-mpi/dbgsym-root/usr/lib/debug/.build-id/73/6c7f04c076ad6d485d86244f01f69712450a7c.debug chmod 0644 -- debian/.debhelper/python3-escript-mpi/dbgsym-root/usr/lib/debug/.build-id/73/6c7f04c076ad6d485d86244f01f69712450a7c.debug chown 0:0 -- debian/.debhelper/python3-escript-mpi/dbgsym-root/usr/lib/debug/.build-id/73/6c7f04c076ad6d485d86244f01f69712450a7c.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-escript-mpi/usr/lib/python3-escript-mpi/esys/weipa/weipacpp.so objcopy --add-gnu-debuglink debian/.debhelper/python3-escript-mpi/dbgsym-root/usr/lib/debug/.build-id/73/6c7f04c076ad6d485d86244f01f69712450a7c.debug debian/python3-escript-mpi/usr/lib/python3-escript-mpi/esys/weipa/weipacpp.so + install -d debian/.debhelper/python3-escript/dbgsym-root/usr/lib/debug/.build-id/7d + objcopy --only-keep-debug --compress-debug-sections debian/python3-escript/usr/lib/python3-escript/lib/libspeckley.so debian/.debhelper/python3-escript/dbgsym-root/usr/lib/debug/.build-id/7d/22972862cd76400cf984fefd3e9b20ee00eacc.debug install -d debian/.debhelper/python3-escript-mpi/dbgsym-root/usr/lib/debug/.build-id/25 objcopy --only-keep-debug --compress-debug-sections debian/python3-escript-mpi/usr/lib/python3-escript-mpi/esys/speckley/speckleycpp.so debian/.debhelper/python3-escript-mpi/dbgsym-root/usr/lib/debug/.build-id/25/6b6e4f8667b23b032a2d3d8073b2020bd4aadb.debug chmod 0644 -- debian/.debhelper/python3-escript-mpi/dbgsym-root/usr/lib/debug/.build-id/25/6b6e4f8667b23b032a2d3d8073b2020bd4aadb.debug @@ -35613,46 +35625,46 @@ echo misc:Pre-Depends= >> debian/python3-escript-mpi.substvars install -d debian/.debhelper/python3-escript-mpi/dbgsym-root/DEBIAN dpkg-gencontrol -ppython3-escript-mpi -ldebian/changelog -Tdebian/python3-escript-mpi.substvars -Pdebian/.debhelper/python3-escript-mpi/dbgsym-root -UPre-Depends -URecommends -USuggests -UEnhances -UProvides -UEssential -UConflicts -DPriority=optional -UHomepage -UImportant -UBuilt-Using -DAuto-Built-Package=debug-symbols -UProtected -DPackage=python3-escript-mpi-dbgsym "-DDepends=python3-escript-mpi (= \${binary:Version})" "-DDescription=debug symbols for python3-escript-mpi" "-DBuild-Ids=256b6e4f8667b23b032a2d3d8073b2020bd4aadb 4227175d662225cf0328c3d0b5a01a504ce8c12b 4629b29d6408e93f1467b7ad2862f9b1ea5a0040 54d4c987d0c5518d872f9364288b5797a43b6b2f 59c7ffb68f6602c10b5770fd29ec093b4f34ed46 60c71eca15a06e4e6d3c783a606896a061eaed6f 60d30641a7b4139003305e8f47f26d989681d92d 7083a3fb326a620d2f2b0f9f6dcf7cb7d39c6dab 736c7f04c076ad6d485d86244f01f69712450a7c 78f02b353bf77e7ab51ffc42ad45c75eee5014d8 985a44e20be2d7fad703a1b5e8111387bdbc76b0 9a047a7a5d1f90ba3dcf95bd5e68702011b94c3d b5c2fc779c304f39ae086740ff69e89e0c11be8b bd9f0c07c48528044e494d8dc9fea605c5219e58 e40da601ed9a90f5e4828cdd63251796994ecae7 e7b6b8e26d825580f01f7b97ddda508288500b87 ea63e8d9b60c9522385e18c4e1ed3e06da77dd9e" -DSection=debug -UMulti-Arch -UReplaces -UBreaks - chmod 0644 -- debian/.debhelper/python3-escript/dbgsym-root/DEBIAN/control - chown 0:0 -- debian/.debhelper/python3-escript/dbgsym-root/DEBIAN/control - dpkg-gencontrol -ppython3-escript -ldebian/changelog -Tdebian/python3-escript.substvars -Pdebian/python3-escript chmod 0644 -- debian/.debhelper/python3-escript-mpi/dbgsym-root/DEBIAN/control chown 0:0 -- debian/.debhelper/python3-escript-mpi/dbgsym-root/DEBIAN/control dpkg-gencontrol -ppython3-escript-mpi -ldebian/changelog -Tdebian/python3-escript-mpi.substvars -Pdebian/python3-escript-mpi + chmod 0644 -- debian/.debhelper/python3-escript/dbgsym-root/DEBIAN/control + chown 0:0 -- debian/.debhelper/python3-escript/dbgsym-root/DEBIAN/control + dpkg-gencontrol -ppython3-escript -ldebian/changelog -Tdebian/python3-escript.substvars -Pdebian/python3-escript +dpkg-gencontrol: warning: package python-escript-doc: substitution variable ${sphinxdoc:Built-Using} unused, but is defined + chmod 0644 -- debian/python-escript-doc/DEBIAN/control + chown 0:0 -- debian/python-escript-doc/DEBIAN/control chmod 0644 -- debian/python3-escript-mpi/DEBIAN/control chown 0:0 -- debian/python3-escript-mpi/DEBIAN/control chmod 0644 -- debian/python3-escript/DEBIAN/control chown 0:0 -- debian/python3-escript/DEBIAN/control -dpkg-gencontrol: warning: package python-escript-doc: substitution variable ${sphinxdoc:Built-Using} unused, but is defined - chmod 0644 -- debian/python-escript-doc/DEBIAN/control - chown 0:0 -- debian/python-escript-doc/DEBIAN/control dh_md5sums -O-v - cd debian/python-escript-doc >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums - cd debian/python3-escript-mpi >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums cd debian/python3-escript >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums + cd debian/python3-escript-mpi >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums + cd debian/python-escript-doc >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/python3-escript/DEBIAN/md5sums chown 0:0 -- debian/python3-escript/DEBIAN/md5sums + cd debian/.debhelper/python3-escript/dbgsym-root >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/python3-escript-mpi/DEBIAN/md5sums chown 0:0 -- debian/python3-escript-mpi/DEBIAN/md5sums cd debian/.debhelper/python3-escript-mpi/dbgsym-root >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums - chmod 0644 -- debian/python-escript-doc/DEBIAN/md5sums - chown 0:0 -- debian/python-escript-doc/DEBIAN/md5sums chmod 0644 -- debian/.debhelper/python3-escript-mpi/dbgsym-root/DEBIAN/md5sums chown 0:0 -- debian/.debhelper/python3-escript-mpi/dbgsym-root/DEBIAN/md5sums - cd debian/.debhelper/python3-escript/dbgsym-root >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums + chmod 0644 -- debian/python-escript-doc/DEBIAN/md5sums + chown 0:0 -- debian/python-escript-doc/DEBIAN/md5sums chmod 0644 -- debian/.debhelper/python3-escript/dbgsym-root/DEBIAN/md5sums chown 0:0 -- debian/.debhelper/python3-escript/dbgsym-root/DEBIAN/md5sums dh_builddeb -O-v dpkg-deb --build debian/python3-escript .. dpkg-deb --build debian/.debhelper/python3-escript/dbgsym-root .. - dpkg-deb --build debian/python-escript-doc .. - dpkg-deb --build debian/.debhelper/python3-escript-mpi/dbgsym-root .. dpkg-deb --build debian/python3-escript-mpi .. + dpkg-deb --build debian/.debhelper/python3-escript-mpi/dbgsym-root .. + dpkg-deb --build debian/python-escript-doc .. +dpkg-deb: building package 'python3-escript-mpi-dbgsym' in '../python3-escript-mpi-dbgsym_5.6-3_arm64.deb'. dpkg-deb: building package 'python3-escript-dbgsym' in '../python3-escript-dbgsym_5.6-3_arm64.deb'. -dpkg-deb: building package 'python3-escript' in '../python3-escript_5.6-3_arm64.deb'. dpkg-deb: building package 'python-escript-doc' in '../python-escript-doc_5.6-3_all.deb'. dpkg-deb: building package 'python3-escript-mpi' in '../python3-escript-mpi_5.6-3_arm64.deb'. -dpkg-deb: building package 'python3-escript-mpi-dbgsym' in '../python3-escript-mpi-dbgsym_5.6-3_arm64.deb'. +dpkg-deb: building package 'python3-escript' in '../python3-escript_5.6-3_arm64.deb'. dpkg-genbuildinfo --build=binary dpkg-genchanges --build=binary >../python-escript_5.6-3_arm64.changes dpkg-genchanges: info: binary-only upload (no source code included) @@ -35660,12 +35672,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/1465513/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/1465513/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/1199302 and its subdirectories -I: Current time: Sat Jan 6 21:27:34 -12 2024 -I: pbuilder-time-stamp: 1704619654 +I: removing directory /srv/workspace/pbuilder/1465513 and its subdirectories +I: Current time: Sun Feb 9 06:29:09 +14 2025 +I: pbuilder-time-stamp: 1739032149