Diff of the two buildlogs: -- --- b1/build.log 2023-06-01 20:08:53.584338057 +0000 +++ b2/build.log 2023-06-01 20:21:33.503045295 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Wed Jul 3 14:23:37 -12 2024 -I: pbuilder-time-stamp: 1720059817 +I: Current time: Fri Jun 2 10:08:56 +14 2023 +I: pbuilder-time-stamp: 1685650136 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bookworm-reproducible-base.tgz] I: copying local configuration @@ -17,7 +17,7 @@ I: copying [./oscar4_5.2.0+dfsg.orig.tar.xz] I: copying [./oscar4_5.2.0+dfsg-2.debian.tar.xz] I: Extracting source -gpgv: Signature made Wed Oct 5 19:17:54 2022 -12 +gpgv: Signature made Thu Oct 6 21:17:54 2022 +14 gpgv: using RSA key 772292F6F7AC85FAE041D41EE5F43F9C2734F287 gpgv: issuer "merkys@debian.org" gpgv: Can't check signature: No public key @@ -35,137 +35,169 @@ dpkg-source: info: applying remove-inchi.patch I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/2236/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/11234/tmp/hooks/D01_modify_environment starting +debug: Running on ionos12-i386. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Jun 2 10:09 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/11234/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/11234/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='i386' - DEBIAN_FRONTEND='noninteractive' - DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=16 ' - DISTRIBUTION='bookworm' - HOME='/root' - HOST_ARCH='i386' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="2" [2]="15" [3]="1" [4]="release" [5]="i686-pc-linux-gnu") + BASH_VERSION='5.2.15(1)-release' + BUILDDIR=/build + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=i386 + DEBIAN_FRONTEND=noninteractive + DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=7 ' + DIRSTACK=() + DISTRIBUTION=bookworm + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=i686 + HOST_ARCH=i386 IFS=' ' - INVOCATION_ID='73d06fb695f847c2a21926b81e08b385' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - LD_LIBRARY_PATH='/usr/lib/libeatmydata' - LD_PRELOAD='libeatmydata.so' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='2236' - PS1='# ' - PS2='> ' + INVOCATION_ID=de25e1401a474c0eafed8d3ba60e5090 + LANG=C + LANGUAGE=de_CH:de + LC_ALL=C + LD_LIBRARY_PATH=/usr/lib/libeatmydata + LD_PRELOAD=libeatmydata.so + MACHTYPE=i686-pc-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=11234 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.o3tdXdDe/pbuilderrc_9aTN --distribution bookworm --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bookworm-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.o3tdXdDe/b1 --logfile b1/build.log oscar4_5.2.0+dfsg-2.dsc' - SUDO_GID='112' - SUDO_UID='107' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://85.184.249.68:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.o3tdXdDe/pbuilderrc_yKlg --distribution bookworm --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bookworm-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.o3tdXdDe/b2 --logfile b2/build.log --extrapackages usrmerge oscar4_5.2.0+dfsg-2.dsc' + SUDO_GID=112 + SUDO_UID=107 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://78.137.99.97:3128 I: uname -a - Linux ionos6-i386 5.10.0-23-amd64 #1 SMP Debian 5.10.179-1 (2023-05-12) x86_64 GNU/Linux + Linux i-capture-the-hostname 5.10.0-23-686-pae #1 SMP Debian 5.10.179-1 (2023-05-12) i686 GNU/Linux I: ls -l /bin total 6036 - -rwxr-xr-x 1 root root 1408088 Apr 23 2023 bash - -rwxr-xr-x 3 root root 38404 Sep 18 2022 bunzip2 - -rwxr-xr-x 3 root root 38404 Sep 18 2022 bzcat - lrwxrwxrwx 1 root root 6 Sep 18 2022 bzcmp -> bzdiff - -rwxr-xr-x 1 root root 2225 Sep 18 2022 bzdiff - lrwxrwxrwx 1 root root 6 Sep 18 2022 bzegrep -> bzgrep - -rwxr-xr-x 1 root root 4893 Nov 27 2021 bzexe - lrwxrwxrwx 1 root root 6 Sep 18 2022 bzfgrep -> bzgrep - -rwxr-xr-x 1 root root 3775 Sep 18 2022 bzgrep - -rwxr-xr-x 3 root root 38404 Sep 18 2022 bzip2 - -rwxr-xr-x 1 root root 17892 Sep 18 2022 bzip2recover - lrwxrwxrwx 1 root root 6 Sep 18 2022 bzless -> bzmore - -rwxr-xr-x 1 root root 1297 Sep 18 2022 bzmore - -rwxr-xr-x 1 root root 42920 Sep 20 2022 cat - -rwxr-xr-x 1 root root 79816 Sep 20 2022 chgrp - -rwxr-xr-x 1 root root 67496 Sep 20 2022 chmod - -rwxr-xr-x 1 root root 79816 Sep 20 2022 chown - -rwxr-xr-x 1 root root 162024 Sep 20 2022 cp - -rwxr-xr-x 1 root root 136916 Jan 5 2023 dash - -rwxr-xr-x 1 root root 137160 Sep 20 2022 date - -rwxr-xr-x 1 root root 100364 Sep 20 2022 dd - -rwxr-xr-x 1 root root 108940 Sep 20 2022 df - -rwxr-xr-x 1 root root 162152 Sep 20 2022 dir - -rwxr-xr-x 1 root root 87760 Mar 22 2023 dmesg - lrwxrwxrwx 1 root root 8 Dec 19 2022 dnsdomainname -> hostname - lrwxrwxrwx 1 root root 8 Dec 19 2022 domainname -> hostname - -rwxr-xr-x 1 root root 38760 Sep 20 2022 echo - -rwxr-xr-x 1 root root 41 Jan 24 2023 egrep - -rwxr-xr-x 1 root root 34664 Sep 20 2022 false - -rwxr-xr-x 1 root root 41 Jan 24 2023 fgrep - -rwxr-xr-x 1 root root 84272 Mar 22 2023 findmnt - -rwsr-xr-x 1 root root 30240 Mar 22 2023 fusermount - -rwxr-xr-x 1 root root 218680 Jan 24 2023 grep - -rwxr-xr-x 2 root root 2346 Apr 9 2022 gunzip - -rwxr-xr-x 1 root root 6447 Apr 9 2022 gzexe - -rwxr-xr-x 1 root root 100952 Apr 9 2022 gzip - -rwxr-xr-x 1 root root 21916 Dec 19 2022 hostname - -rwxr-xr-x 1 root root 75756 Sep 20 2022 ln - -rwxr-xr-x 1 root root 55600 Mar 22 2023 login - -rwxr-xr-x 1 root root 162152 Sep 20 2022 ls - -rwxr-xr-x 1 root root 214568 Mar 22 2023 lsblk - -rwxr-xr-x 1 root root 96328 Sep 20 2022 mkdir - -rwxr-xr-x 1 root root 84008 Sep 20 2022 mknod - -rwxr-xr-x 1 root root 38792 Sep 20 2022 mktemp - -rwxr-xr-x 1 root root 63016 Mar 22 2023 more - -rwsr-xr-x 1 root root 58912 Mar 22 2023 mount - -rwxr-xr-x 1 root root 13856 Mar 22 2023 mountpoint - -rwxr-xr-x 1 root root 157932 Sep 20 2022 mv - lrwxrwxrwx 1 root root 8 Dec 19 2022 nisdomainname -> hostname - lrwxrwxrwx 1 root root 14 Apr 2 2023 pidof -> /sbin/killall5 - -rwxr-xr-x 1 root root 38792 Sep 20 2022 pwd - lrwxrwxrwx 1 root root 4 Apr 23 2023 rbash -> bash - -rwxr-xr-x 1 root root 51080 Sep 20 2022 readlink - -rwxr-xr-x 1 root root 75720 Sep 20 2022 rm - -rwxr-xr-x 1 root root 51080 Sep 20 2022 rmdir - -rwxr-xr-x 1 root root 22308 Nov 2 2022 run-parts - -rwxr-xr-x 1 root root 133224 Jan 5 2023 sed - lrwxrwxrwx 1 root root 4 Jan 5 2023 sh -> dash - -rwxr-xr-x 1 root root 38760 Sep 20 2022 sleep - -rwxr-xr-x 1 root root 87976 Sep 20 2022 stty - -rwsr-xr-x 1 root root 83492 Mar 22 2023 su - -rwxr-xr-x 1 root root 38792 Sep 20 2022 sync - -rwxr-xr-x 1 root root 598456 Apr 6 2023 tar - -rwxr-xr-x 1 root root 13860 Nov 2 2022 tempfile - -rwxr-xr-x 1 root root 120776 Sep 20 2022 touch - -rwxr-xr-x 1 root root 34664 Sep 20 2022 true - -rwxr-xr-x 1 root root 17892 Mar 22 2023 ulockmgr_server - -rwsr-xr-x 1 root root 30236 Mar 22 2023 umount - -rwxr-xr-x 1 root root 38760 Sep 20 2022 uname - -rwxr-xr-x 2 root root 2346 Apr 9 2022 uncompress - -rwxr-xr-x 1 root root 162152 Sep 20 2022 vdir - -rwxr-xr-x 1 root root 71216 Mar 22 2023 wdctl - lrwxrwxrwx 1 root root 8 Dec 19 2022 ypdomainname -> hostname - -rwxr-xr-x 1 root root 1984 Apr 9 2022 zcat - -rwxr-xr-x 1 root root 1678 Apr 9 2022 zcmp - -rwxr-xr-x 1 root root 6460 Apr 9 2022 zdiff - -rwxr-xr-x 1 root root 29 Apr 9 2022 zegrep - -rwxr-xr-x 1 root root 29 Apr 9 2022 zfgrep - -rwxr-xr-x 1 root root 2081 Apr 9 2022 zforce - -rwxr-xr-x 1 root root 8103 Apr 9 2022 zgrep - -rwxr-xr-x 1 root root 2206 Apr 9 2022 zless - -rwxr-xr-x 1 root root 1842 Apr 9 2022 zmore - -rwxr-xr-x 1 root root 4577 Apr 9 2022 znew -I: user script /srv/workspace/pbuilder/2236/tmp/hooks/D02_print_environment finished + -rwxr-xr-x 1 root root 1408088 Apr 24 11:24 bash + -rwxr-xr-x 3 root root 38404 Sep 19 2022 bunzip2 + -rwxr-xr-x 3 root root 38404 Sep 19 2022 bzcat + lrwxrwxrwx 1 root root 6 Sep 19 2022 bzcmp -> bzdiff + -rwxr-xr-x 1 root root 2225 Sep 19 2022 bzdiff + lrwxrwxrwx 1 root root 6 Sep 19 2022 bzegrep -> bzgrep + -rwxr-xr-x 1 root root 4893 Nov 28 2021 bzexe + lrwxrwxrwx 1 root root 6 Sep 19 2022 bzfgrep -> bzgrep + -rwxr-xr-x 1 root root 3775 Sep 19 2022 bzgrep + -rwxr-xr-x 3 root root 38404 Sep 19 2022 bzip2 + -rwxr-xr-x 1 root root 17892 Sep 19 2022 bzip2recover + lrwxrwxrwx 1 root root 6 Sep 19 2022 bzless -> bzmore + -rwxr-xr-x 1 root root 1297 Sep 19 2022 bzmore + -rwxr-xr-x 1 root root 42920 Sep 21 2022 cat + -rwxr-xr-x 1 root root 79816 Sep 21 2022 chgrp + -rwxr-xr-x 1 root root 67496 Sep 21 2022 chmod + -rwxr-xr-x 1 root root 79816 Sep 21 2022 chown + -rwxr-xr-x 1 root root 162024 Sep 21 2022 cp + -rwxr-xr-x 1 root root 136916 Jan 6 03:20 dash + -rwxr-xr-x 1 root root 137160 Sep 21 2022 date + -rwxr-xr-x 1 root root 100364 Sep 21 2022 dd + -rwxr-xr-x 1 root root 108940 Sep 21 2022 df + -rwxr-xr-x 1 root root 162152 Sep 21 2022 dir + -rwxr-xr-x 1 root root 87760 Mar 24 00:20 dmesg + lrwxrwxrwx 1 root root 8 Dec 20 03:33 dnsdomainname -> hostname + lrwxrwxrwx 1 root root 8 Dec 20 03:33 domainname -> hostname + -rwxr-xr-x 1 root root 38760 Sep 21 2022 echo + -rwxr-xr-x 1 root root 41 Jan 25 04:43 egrep + -rwxr-xr-x 1 root root 34664 Sep 21 2022 false + -rwxr-xr-x 1 root root 41 Jan 25 04:43 fgrep + -rwxr-xr-x 1 root root 84272 Mar 24 00:20 findmnt + -rwsr-xr-x 1 root root 30240 Mar 23 22:38 fusermount + -rwxr-xr-x 1 root root 218680 Jan 25 04:43 grep + -rwxr-xr-x 2 root root 2346 Apr 10 2022 gunzip + -rwxr-xr-x 1 root root 6447 Apr 10 2022 gzexe + -rwxr-xr-x 1 root root 100952 Apr 10 2022 gzip + -rwxr-xr-x 1 root root 21916 Dec 20 03:33 hostname + -rwxr-xr-x 1 root root 75756 Sep 21 2022 ln + -rwxr-xr-x 1 root root 55600 Mar 24 01:43 login + -rwxr-xr-x 1 root root 162152 Sep 21 2022 ls + -rwxr-xr-x 1 root root 214568 Mar 24 00:20 lsblk + -rwxr-xr-x 1 root root 96328 Sep 21 2022 mkdir + -rwxr-xr-x 1 root root 84008 Sep 21 2022 mknod + -rwxr-xr-x 1 root root 38792 Sep 21 2022 mktemp + -rwxr-xr-x 1 root root 63016 Mar 24 00:20 more + -rwsr-xr-x 1 root root 58912 Mar 24 00:20 mount + -rwxr-xr-x 1 root root 13856 Mar 24 00:20 mountpoint + -rwxr-xr-x 1 root root 157932 Sep 21 2022 mv + lrwxrwxrwx 1 root root 8 Dec 20 03:33 nisdomainname -> hostname + lrwxrwxrwx 1 root root 14 Apr 3 20:25 pidof -> /sbin/killall5 + -rwxr-xr-x 1 root root 38792 Sep 21 2022 pwd + lrwxrwxrwx 1 root root 4 Apr 24 11:24 rbash -> bash + -rwxr-xr-x 1 root root 51080 Sep 21 2022 readlink + -rwxr-xr-x 1 root root 75720 Sep 21 2022 rm + -rwxr-xr-x 1 root root 51080 Sep 21 2022 rmdir + -rwxr-xr-x 1 root root 22308 Nov 3 2022 run-parts + -rwxr-xr-x 1 root root 133224 Jan 6 09:55 sed + lrwxrwxrwx 1 root root 9 Jun 2 10:09 sh -> /bin/bash + -rwxr-xr-x 1 root root 38760 Sep 21 2022 sleep + -rwxr-xr-x 1 root root 87976 Sep 21 2022 stty + -rwsr-xr-x 1 root root 83492 Mar 24 00:20 su + -rwxr-xr-x 1 root root 38792 Sep 21 2022 sync + -rwxr-xr-x 1 root root 598456 Apr 7 04:25 tar + -rwxr-xr-x 1 root root 13860 Nov 3 2022 tempfile + -rwxr-xr-x 1 root root 120776 Sep 21 2022 touch + -rwxr-xr-x 1 root root 34664 Sep 21 2022 true + -rwxr-xr-x 1 root root 17892 Mar 23 22:38 ulockmgr_server + -rwsr-xr-x 1 root root 30236 Mar 24 00:20 umount + -rwxr-xr-x 1 root root 38760 Sep 21 2022 uname + -rwxr-xr-x 2 root root 2346 Apr 10 2022 uncompress + -rwxr-xr-x 1 root root 162152 Sep 21 2022 vdir + -rwxr-xr-x 1 root root 71216 Mar 24 00:20 wdctl + lrwxrwxrwx 1 root root 8 Dec 20 03:33 ypdomainname -> hostname + -rwxr-xr-x 1 root root 1984 Apr 10 2022 zcat + -rwxr-xr-x 1 root root 1678 Apr 10 2022 zcmp + -rwxr-xr-x 1 root root 6460 Apr 10 2022 zdiff + -rwxr-xr-x 1 root root 29 Apr 10 2022 zegrep + -rwxr-xr-x 1 root root 29 Apr 10 2022 zfgrep + -rwxr-xr-x 1 root root 2081 Apr 10 2022 zforce + -rwxr-xr-x 1 root root 8103 Apr 10 2022 zgrep + -rwxr-xr-x 1 root root 2206 Apr 10 2022 zless + -rwxr-xr-x 1 root root 1842 Apr 10 2022 zmore + -rwxr-xr-x 1 root root 4577 Apr 10 2022 znew +I: user script /srv/workspace/pbuilder/11234/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -511,7 +543,7 @@ Get: 280 http://deb.debian.org/debian bookworm/main i386 maven all 3.8.7-1 [18.9 kB] Get: 281 http://deb.debian.org/debian bookworm/main i386 maven-repo-helper all 1.11 [142 kB] Get: 282 http://deb.debian.org/debian bookworm/main i386 maven-debian-helper all 2.6.3 [108 kB] -Fetched 594 MB in 9s (64.0 MB/s) +Fetched 594 MB in 25s (23.5 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package sgml-base. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19599 files and directories currently installed.) @@ -1839,8 +1871,19 @@ Writing extended state information... Building tag database... -> Finished parsing the build-deps +Reading package lists... +Building dependency tree... +Reading state information... +usrmerge is already the newest version (35). +0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: Building the package -I: Running cd /build/oscar4-5.2.0+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../oscar4_5.2.0+dfsg-2_source.changes +I: user script /srv/workspace/pbuilder/11234/tmp/hooks/A99_set_merged_usr starting +Re-configuring usrmerge... +removed '/etc/unsupported-skip-usrmerge-conversion' +The system has been successfully converted. +I: user script /srv/workspace/pbuilder/11234/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/oscar4-5.2.0+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../oscar4_5.2.0+dfsg-2_source.changes dpkg-buildpackage: info: source package oscar4 dpkg-buildpackage: info: source version 5.2.0+dfsg-2 dpkg-buildpackage: info: source distribution unstable @@ -2214,24 +2257,24 @@ [INFO] ------------------------------------------------------------------------ [INFO] Reactor Summary for oscar4-parent 5.2.0: [INFO] -[INFO] oscar4-parent ...................................... SUCCESS [ 0.215 s] -[INFO] oscar4-core ........................................ SUCCESS [ 1.895 s] -[INFO] Chemical Name Dictionaries ......................... SUCCESS [ 0.809 s] -[INFO] oscar4-obo ......................................... SUCCESS [ 1.232 s] -[INFO] oscar4-tokenizer ................................... SUCCESS [ 0.307 s] -[INFO] oscar4-recogniser-core ............................. SUCCESS [ 0.801 s] -[INFO] oscar4-memmrecogniser .............................. SUCCESS [ 0.669 s] -[INFO] oscar4-patternrecogniser ........................... SUCCESS [ 0.201 s] -[INFO] oscar4-opsin ....................................... SUCCESS [ 0.134 s] -[INFO] oscar4-api ......................................... SUCCESS [ 0.172 s] -[INFO] oscar4-preprocessor ................................ SUCCESS [ 0.083 s] -[INFO] oscar4-formatter ................................... SUCCESS [ 0.052 s] -[INFO] oscar4-data ........................................ SUCCESS [ 0.177 s] +[INFO] oscar4-parent ...................................... SUCCESS [ 0.311 s] +[INFO] oscar4-core ........................................ SUCCESS [ 3.549 s] +[INFO] Chemical Name Dictionaries ......................... SUCCESS [ 1.395 s] +[INFO] oscar4-obo ......................................... SUCCESS [ 2.146 s] +[INFO] oscar4-tokenizer ................................... SUCCESS [ 0.573 s] +[INFO] oscar4-recogniser-core ............................. SUCCESS [ 1.534 s] +[INFO] oscar4-memmrecogniser .............................. SUCCESS [ 1.327 s] +[INFO] oscar4-patternrecogniser ........................... SUCCESS [ 0.396 s] +[INFO] oscar4-opsin ....................................... SUCCESS [ 0.223 s] +[INFO] oscar4-api ......................................... SUCCESS [ 0.312 s] +[INFO] oscar4-preprocessor ................................ SUCCESS [ 0.122 s] +[INFO] oscar4-formatter ................................... SUCCESS [ 0.104 s] +[INFO] oscar4-data ........................................ SUCCESS [ 0.371 s] [INFO] ------------------------------------------------------------------------ [INFO] BUILD SUCCESS [INFO] ------------------------------------------------------------------------ -[INFO] Total time: 6.873 s -[INFO] Finished at: 2024-07-03T14:24:43-12:00 +[INFO] Total time: 12.578 s +[INFO] Finished at: 2023-06-02T10:12:47+14:00 [INFO] ------------------------------------------------------------------------  dh_auto_test /usr/lib/jvm/default-java/bin/java -noverify -cp /usr/share/maven/boot/plexus-classworlds-2.x.jar -Dmaven.home=/usr/share/maven -Dmaven.multiModuleProjectDirectory=/build/oscar4-5.2.0\+dfsg -Dclassworlds.conf=/etc/maven/m2-debian.conf org.codehaus.plexus.classworlds.launcher.Launcher -s/etc/maven/settings-debian.xml -Ddebian.dir=/build/oscar4-5.2.0\+dfsg/debian -Dmaven.repo.local=/build/oscar4-5.2.0\+dfsg/debian/maven-repo --batch-mode test @@ -2285,36 +2328,36 @@ [INFO] T E S T S [INFO] ------------------------------------------------------- [INFO] Running uk.ac.cam.ch.wwmm.oscar.normalize.NormalizingReaderTest -[INFO] Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.04 s - in uk.ac.cam.ch.wwmm.oscar.normalize.NormalizingReaderTest +[INFO] Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.076 s - in uk.ac.cam.ch.wwmm.oscar.normalize.NormalizingReaderTest [INFO] Running uk.ac.cam.ch.wwmm.oscar.normalize.NormalizerTest -[INFO] Tests run: 6, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.001 s - in uk.ac.cam.ch.wwmm.oscar.normalize.NormalizerTest -[INFO] Running uk.ac.cam.ch.wwmm.oscar.util.CacheMapTest -[INFO] Tests run: 2, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.001 s - in uk.ac.cam.ch.wwmm.oscar.util.CacheMapTest +[INFO] Tests run: 6, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.002 s - in uk.ac.cam.ch.wwmm.oscar.normalize.NormalizerTest +[INFO] Running uk.ac.cam.ch.wwmm.oscar.tools.StringToolsTest +[INFO] Tests run: 17, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.002 s - in uk.ac.cam.ch.wwmm.oscar.tools.StringToolsTest +[INFO] Running uk.ac.cam.ch.wwmm.oscar.tools.StandoffTableTest +[INFO] Tests run: 4, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.08 s - in uk.ac.cam.ch.wwmm.oscar.tools.StandoffTableTest +[INFO] Running uk.ac.cam.ch.wwmm.oscar.tools.ResourceGetterTest +[WARNING] Tests run: 9, Failures: 0, Errors: 0, Skipped: 1, Time elapsed: 0.04 s - in uk.ac.cam.ch.wwmm.oscar.tools.ResourceGetterTest [INFO] Running uk.ac.cam.ch.wwmm.oscar.xmltools.XOMToolsTest [INFO] Tests run: 7, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.001 s - in uk.ac.cam.ch.wwmm.oscar.xmltools.XOMToolsTest [INFO] Running uk.ac.cam.ch.wwmm.oscar.terms.TermSetsTest SLF4J: Failed to load class "org.slf4j.impl.StaticLoggerBinder". SLF4J: Defaulting to no-operation (NOP) logger implementation SLF4J: See http://www.slf4j.org/codes.html#StaticLoggerBinder for further details. -[INFO] Tests run: 23, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.213 s - in uk.ac.cam.ch.wwmm.oscar.terms.TermSetsTest -[INFO] Running uk.ac.cam.ch.wwmm.oscar.tools.StandoffTableTest -[INFO] Tests run: 4, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.047 s - in uk.ac.cam.ch.wwmm.oscar.tools.StandoffTableTest -[INFO] Running uk.ac.cam.ch.wwmm.oscar.tools.StringToolsTest -[INFO] Tests run: 17, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.006 s - in uk.ac.cam.ch.wwmm.oscar.tools.StringToolsTest -[INFO] Running uk.ac.cam.ch.wwmm.oscar.tools.ResourceGetterTest -[WARNING] Tests run: 9, Failures: 0, Errors: 0, Skipped: 1, Time elapsed: 0.01 s - in uk.ac.cam.ch.wwmm.oscar.tools.ResourceGetterTest +[INFO] Tests run: 23, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.358 s - in uk.ac.cam.ch.wwmm.oscar.terms.TermSetsTest [INFO] Running uk.ac.cam.ch.wwmm.oscar.types.BioTypeTest [INFO] Tests run: 14, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.001 s - in uk.ac.cam.ch.wwmm.oscar.types.BioTypeTest +[INFO] Running uk.ac.cam.ch.wwmm.oscar.types.NamedEntityTypeTest +[INFO] Tests run: 6, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0 s - in uk.ac.cam.ch.wwmm.oscar.types.NamedEntityTypeTest [INFO] Running uk.ac.cam.ch.wwmm.oscar.types.BioTagTest [INFO] Tests run: 2, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0 s - in uk.ac.cam.ch.wwmm.oscar.types.BioTagTest -[INFO] Running uk.ac.cam.ch.wwmm.oscar.types.NamedEntityTypeTest -[INFO] Tests run: 6, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.001 s - in uk.ac.cam.ch.wwmm.oscar.types.NamedEntityTypeTest [INFO] Running uk.ac.cam.ch.wwmm.oscar.document.TokenSequenceTest [INFO] Tests run: 9, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.001 s - in uk.ac.cam.ch.wwmm.oscar.document.TokenSequenceTest -[INFO] Running uk.ac.cam.ch.wwmm.oscar.document.NamedEntitityTest -[INFO] Tests run: 2, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.001 s - in uk.ac.cam.ch.wwmm.oscar.document.NamedEntitityTest [INFO] Running uk.ac.cam.ch.wwmm.oscar.document.TokenTest -[INFO] Tests run: 6, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.001 s - in uk.ac.cam.ch.wwmm.oscar.document.TokenTest +[INFO] Tests run: 6, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0 s - in uk.ac.cam.ch.wwmm.oscar.document.TokenTest +[INFO] Running uk.ac.cam.ch.wwmm.oscar.document.NamedEntitityTest +[INFO] Tests run: 2, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0 s - in uk.ac.cam.ch.wwmm.oscar.document.NamedEntitityTest +[INFO] Running uk.ac.cam.ch.wwmm.oscar.util.CacheMapTest +[INFO] Tests run: 2, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0 s - in uk.ac.cam.ch.wwmm.oscar.util.CacheMapTest [INFO] [INFO] Results: [INFO] @@ -2344,27 +2387,27 @@ [INFO] ------------------------------------------------------- [INFO] T E S T S [INFO] ------------------------------------------------------- -[INFO] Running uk.ac.cam.ch.wwmm.oscar.chemnamedict.entities.ChemicalStructureTest -[INFO] Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.046 s - in uk.ac.cam.ch.wwmm.oscar.chemnamedict.entities.ChemicalStructureTest -[INFO] Running uk.ac.cam.ch.wwmm.oscar.chemnamedict.entities.ResolvedNamedEntityTest -[INFO] Tests run: 6, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.004 s - in uk.ac.cam.ch.wwmm.oscar.chemnamedict.entities.ResolvedNamedEntityTest +[INFO] Running uk.ac.cam.ch.wwmm.oscar.chemnamedict.dictionaries.ChEBIDictionaryTest +[INFO] Tests run: 3, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 1.147 s - in uk.ac.cam.ch.wwmm.oscar.chemnamedict.dictionaries.ChEBIDictionaryTest +[INFO] Running uk.ac.cam.ch.wwmm.oscar.chemnamedict.dictionaries.DefaultDictionaryTest +[INFO] Tests run: 2, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.03 s - in uk.ac.cam.ch.wwmm.oscar.chemnamedict.dictionaries.DefaultDictionaryTest [INFO] Running uk.ac.cam.ch.wwmm.oscar.chemnamedict.dictionaries.PolymerDictionaryTest SLF4J: Failed to load class "org.slf4j.impl.StaticLoggerBinder". SLF4J: Defaulting to no-operation (NOP) logger implementation SLF4J: See http://www.slf4j.org/codes.html#StaticLoggerBinder for further details. -[INFO] Tests run: 3, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.081 s - in uk.ac.cam.ch.wwmm.oscar.chemnamedict.dictionaries.PolymerDictionaryTest -[INFO] Running uk.ac.cam.ch.wwmm.oscar.chemnamedict.dictionaries.DefaultDictionaryTest -[INFO] Tests run: 2, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.043 s - in uk.ac.cam.ch.wwmm.oscar.chemnamedict.dictionaries.DefaultDictionaryTest -[INFO] Running uk.ac.cam.ch.wwmm.oscar.chemnamedict.dictionaries.ChEBIDictionaryTest -[INFO] Tests run: 3, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.679 s - in uk.ac.cam.ch.wwmm.oscar.chemnamedict.dictionaries.ChEBIDictionaryTest +[INFO] Tests run: 3, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.016 s - in uk.ac.cam.ch.wwmm.oscar.chemnamedict.dictionaries.PolymerDictionaryTest +[INFO] Running uk.ac.cam.ch.wwmm.oscar.chemnamedict.tools.ResourceGetterTest +[INFO] Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.007 s - in uk.ac.cam.ch.wwmm.oscar.chemnamedict.tools.ResourceGetterTest +[INFO] Running uk.ac.cam.ch.wwmm.oscar.chemnamedict.entities.ResolvedNamedEntityTest +[INFO] Tests run: 6, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.008 s - in uk.ac.cam.ch.wwmm.oscar.chemnamedict.entities.ResolvedNamedEntityTest +[INFO] Running uk.ac.cam.ch.wwmm.oscar.chemnamedict.entities.ChemicalStructureTest +[INFO] Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.001 s - in uk.ac.cam.ch.wwmm.oscar.chemnamedict.entities.ChemicalStructureTest [INFO] Running uk.ac.cam.ch.wwmm.oscar.chemnamedict.core.MutableChemNameDictTest -[INFO] Tests run: 3, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0 s - in uk.ac.cam.ch.wwmm.oscar.chemnamedict.core.MutableChemNameDictTest -[INFO] Running uk.ac.cam.ch.wwmm.oscar.chemnamedict.core.ImmutableChemNameDictTest -[INFO] Tests run: 4, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.004 s - in uk.ac.cam.ch.wwmm.oscar.chemnamedict.core.ImmutableChemNameDictTest +[INFO] Tests run: 3, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.001 s - in uk.ac.cam.ch.wwmm.oscar.chemnamedict.core.MutableChemNameDictTest [INFO] Running uk.ac.cam.ch.wwmm.oscar.chemnamedict.core.ChemNameDictRegistryTest -[INFO] Tests run: 18, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.025 s - in uk.ac.cam.ch.wwmm.oscar.chemnamedict.core.ChemNameDictRegistryTest -[INFO] Running uk.ac.cam.ch.wwmm.oscar.chemnamedict.tools.ResourceGetterTest -[INFO] Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0 s - in uk.ac.cam.ch.wwmm.oscar.chemnamedict.tools.ResourceGetterTest +[INFO] Tests run: 18, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.039 s - in uk.ac.cam.ch.wwmm.oscar.chemnamedict.core.ChemNameDictRegistryTest +[INFO] Running uk.ac.cam.ch.wwmm.oscar.chemnamedict.core.ImmutableChemNameDictTest +[INFO] Tests run: 4, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0 s - in uk.ac.cam.ch.wwmm.oscar.chemnamedict.core.ImmutableChemNameDictTest [INFO] [INFO] Results: [INFO] @@ -2394,17 +2437,17 @@ [INFO] ------------------------------------------------------- [INFO] T E S T S [INFO] ------------------------------------------------------- -[INFO] Running uk.ac.cam.ch.wwmm.oscar.obo.OBOOntologyTest +[INFO] Running uk.ac.cam.ch.wwmm.oscar.ont.TermsFileReaderTest +[INFO] Tests run: 10, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.88 s - in uk.ac.cam.ch.wwmm.oscar.ont.TermsFileReaderTest +[INFO] Running uk.ac.cam.ch.wwmm.oscar.ont.EquivalentTermSetTest +[INFO] Tests run: 4, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.001 s - in uk.ac.cam.ch.wwmm.oscar.ont.EquivalentTermSetTest +[INFO] Running uk.ac.cam.ch.wwmm.oscar.ont.OntologyTermsTest SLF4J: Failed to load class "org.slf4j.impl.StaticLoggerBinder". SLF4J: Defaulting to no-operation (NOP) logger implementation SLF4J: See http://www.slf4j.org/codes.html#StaticLoggerBinder for further details. -[INFO] Tests run: 3, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 13.647 s - in uk.ac.cam.ch.wwmm.oscar.obo.OBOOntologyTest -[INFO] Running uk.ac.cam.ch.wwmm.oscar.ont.OntologyTermsTest -[INFO] Tests run: 12, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.658 s - in uk.ac.cam.ch.wwmm.oscar.ont.OntologyTermsTest -[INFO] Running uk.ac.cam.ch.wwmm.oscar.ont.TermsFileReaderTest -[INFO] Tests run: 10, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.608 s - in uk.ac.cam.ch.wwmm.oscar.ont.TermsFileReaderTest -[INFO] Running uk.ac.cam.ch.wwmm.oscar.ont.EquivalentTermSetTest -[INFO] Tests run: 4, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0 s - in uk.ac.cam.ch.wwmm.oscar.ont.EquivalentTermSetTest +[INFO] Tests run: 12, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.856 s - in uk.ac.cam.ch.wwmm.oscar.ont.OntologyTermsTest +[INFO] Running uk.ac.cam.ch.wwmm.oscar.obo.OBOOntologyTest +[INFO] Tests run: 3, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 22.167 s - in uk.ac.cam.ch.wwmm.oscar.obo.OBOOntologyTest [INFO] [INFO] Results: [INFO] @@ -2434,19 +2477,19 @@ [INFO] ------------------------------------------------------- [INFO] T E S T S [INFO] ------------------------------------------------------- -[INFO] Running uk.ac.cam.ch.wwmm.oscar.document.ProcessingDocumentFactoryTest +[INFO] Running uk.ac.cam.ch.wwmm.oscar.document.AdditionalTokenSequenceTest SLF4J: Failed to load class "org.slf4j.impl.StaticLoggerBinder". SLF4J: Defaulting to no-operation (NOP) logger implementation SLF4J: See http://www.slf4j.org/codes.html#StaticLoggerBinder for further details. -[INFO] Tests run: 2, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.396 s - in uk.ac.cam.ch.wwmm.oscar.document.ProcessingDocumentFactoryTest -[INFO] Running uk.ac.cam.ch.wwmm.oscar.document.AdditionalTokenSequenceTest -[INFO] Tests run: 8, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.005 s - in uk.ac.cam.ch.wwmm.oscar.document.AdditionalTokenSequenceTest -[INFO] Running uk.ac.cam.ch.wwmm.oscartokeniser.HyphenTokeniserTest -[INFO] Tests run: 19, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.379 s - in uk.ac.cam.ch.wwmm.oscartokeniser.HyphenTokeniserTest +[INFO] Tests run: 8, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.701 s - in uk.ac.cam.ch.wwmm.oscar.document.AdditionalTokenSequenceTest +[INFO] Running uk.ac.cam.ch.wwmm.oscar.document.ProcessingDocumentFactoryTest +[INFO] Tests run: 2, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0 s - in uk.ac.cam.ch.wwmm.oscar.document.ProcessingDocumentFactoryTest [INFO] Running uk.ac.cam.ch.wwmm.oscartokeniser.TokeniserTest -[WARNING] Tests run: 35, Failures: 0, Errors: 0, Skipped: 1, Time elapsed: 0.017 s - in uk.ac.cam.ch.wwmm.oscartokeniser.TokeniserTest +[WARNING] Tests run: 35, Failures: 0, Errors: 0, Skipped: 1, Time elapsed: 0.65 s - in uk.ac.cam.ch.wwmm.oscartokeniser.TokeniserTest [INFO] Running uk.ac.cam.ch.wwmm.oscartokeniser.TokenClassifierTest -[INFO] Tests run: 19, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.027 s - in uk.ac.cam.ch.wwmm.oscartokeniser.TokenClassifierTest +[INFO] Tests run: 19, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.084 s - in uk.ac.cam.ch.wwmm.oscartokeniser.TokenClassifierTest +[INFO] Running uk.ac.cam.ch.wwmm.oscartokeniser.HyphenTokeniserTest +[INFO] Tests run: 19, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.014 s - in uk.ac.cam.ch.wwmm.oscartokeniser.HyphenTokeniserTest [INFO] [INFO] Results: [INFO] @@ -2476,29 +2519,29 @@ [INFO] ------------------------------------------------------- [INFO] T E S T S [INFO] ------------------------------------------------------- -[INFO] Running uk.ac.cam.ch.wwmm.oscarrecogniser.finder.AutomatonStateTest -[INFO] Tests run: 3, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.054 s - in uk.ac.cam.ch.wwmm.oscarrecogniser.finder.AutomatonStateTest -[INFO] Running uk.ac.cam.ch.wwmm.oscarrecogniser.finder.DFASupplementaryTermFinderTest +[INFO] Running uk.ac.cam.ch.wwmm.oscarrecogniser.tokenanalysis.NGramBuilderTest SLF4J: Failed to load class "org.slf4j.impl.StaticLoggerBinder". SLF4J: Defaulting to no-operation (NOP) logger implementation SLF4J: See http://www.slf4j.org/codes.html#StaticLoggerBinder for further details. -[WARNING] Tests run: 6, Failures: 0, Errors: 0, Skipped: 1, Time elapsed: 0.397 s - in uk.ac.cam.ch.wwmm.oscarrecogniser.finder.DFASupplementaryTermFinderTest -[INFO] Running uk.ac.cam.ch.wwmm.oscarrecogniser.finder.DFAFinderTest -[WARNING] Tests run: 8, Failures: 0, Errors: 0, Skipped: 1, Time elapsed: 6.571 s - in uk.ac.cam.ch.wwmm.oscarrecogniser.finder.DFAFinderTest +[WARNING] Tests run: 11, Failures: 0, Errors: 0, Skipped: 3, Time elapsed: 24.439 s - in uk.ac.cam.ch.wwmm.oscarrecogniser.tokenanalysis.NGramBuilderTest +[INFO] Running uk.ac.cam.ch.wwmm.oscarrecogniser.tokenanalysis.PrefixFinderTest +[INFO] Tests run: 4, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.004 s - in uk.ac.cam.ch.wwmm.oscarrecogniser.tokenanalysis.PrefixFinderTest +[INFO] Running uk.ac.cam.ch.wwmm.oscarrecogniser.saf.StandoffResolverTest +[INFO] Tests run: 6, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.003 s - in uk.ac.cam.ch.wwmm.oscarrecogniser.saf.StandoffResolverTest [INFO] Running uk.ac.cam.ch.wwmm.oscarrecogniser.finder.DFAONTCPRFinderTest -[INFO] Tests run: 12, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 3.386 s - in uk.ac.cam.ch.wwmm.oscarrecogniser.finder.DFAONTCPRFinderTest +[INFO] Tests run: 12, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 5.684 s - in uk.ac.cam.ch.wwmm.oscarrecogniser.finder.DFAONTCPRFinderTest [INFO] Running uk.ac.cam.ch.wwmm.oscarrecogniser.finder.TermMapsTest -[INFO] Tests run: 3, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.001 s - in uk.ac.cam.ch.wwmm.oscarrecogniser.finder.TermMapsTest +[INFO] Tests run: 3, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0 s - in uk.ac.cam.ch.wwmm.oscarrecogniser.finder.TermMapsTest +[INFO] Running uk.ac.cam.ch.wwmm.oscarrecogniser.finder.DFASupplementaryTermFinderTest +[WARNING] Tests run: 6, Failures: 0, Errors: 0, Skipped: 1, Time elapsed: 0.008 s - in uk.ac.cam.ch.wwmm.oscarrecogniser.finder.DFASupplementaryTermFinderTest +[INFO] Running uk.ac.cam.ch.wwmm.oscarrecogniser.finder.AutomatonStateTest +[INFO] Tests run: 3, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0 s - in uk.ac.cam.ch.wwmm.oscarrecogniser.finder.AutomatonStateTest +[INFO] Running uk.ac.cam.ch.wwmm.oscarrecogniser.finder.DFAFinderTest +[WARNING] Tests run: 8, Failures: 0, Errors: 0, Skipped: 1, Time elapsed: 8.474 s - in uk.ac.cam.ch.wwmm.oscarrecogniser.finder.DFAFinderTest [INFO] Running uk.ac.cam.ch.wwmm.oscarrecogniser.regex.RegexRecogniserTest -[INFO] Tests run: 9, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.009 s - in uk.ac.cam.ch.wwmm.oscarrecogniser.regex.RegexRecogniserTest +[INFO] Tests run: 9, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.005 s - in uk.ac.cam.ch.wwmm.oscarrecogniser.regex.RegexRecogniserTest [INFO] Running uk.ac.cam.ch.wwmm.oscarrecogniser.extractedtrainingdata.ExtractedTrainingDataTest -[INFO] Tests run: 3, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.57 s - in uk.ac.cam.ch.wwmm.oscarrecogniser.extractedtrainingdata.ExtractedTrainingDataTest -[INFO] Running uk.ac.cam.ch.wwmm.oscarrecogniser.tokenanalysis.PrefixFinderTest -[INFO] Tests run: 4, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.667 s - in uk.ac.cam.ch.wwmm.oscarrecogniser.tokenanalysis.PrefixFinderTest -[INFO] Running uk.ac.cam.ch.wwmm.oscarrecogniser.tokenanalysis.NGramBuilderTest -[WARNING] Tests run: 11, Failures: 0, Errors: 0, Skipped: 3, Time elapsed: 21.14 s - in uk.ac.cam.ch.wwmm.oscarrecogniser.tokenanalysis.NGramBuilderTest -[INFO] Running uk.ac.cam.ch.wwmm.oscarrecogniser.saf.StandoffResolverTest -[INFO] Tests run: 6, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0 s - in uk.ac.cam.ch.wwmm.oscarrecogniser.saf.StandoffResolverTest +[INFO] Tests run: 3, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.447 s - in uk.ac.cam.ch.wwmm.oscarrecogniser.extractedtrainingdata.ExtractedTrainingDataTest [INFO] [INFO] Results: [INFO] @@ -2528,21 +2571,21 @@ [INFO] ------------------------------------------------------- [INFO] T E S T S [INFO] ------------------------------------------------------- -[INFO] Running uk.ac.cam.ch.wwmm.oscarMEMM.Oscar4RegressionTest +[INFO] Running uk.ac.cam.ch.wwmm.oscarMEMM.memm.MEMMModelTest +[INFO] Tests run: 5, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 1.937 s - in uk.ac.cam.ch.wwmm.oscarMEMM.memm.MEMMModelTest +[INFO] Running uk.ac.cam.ch.wwmm.oscarMEMM.models.ChemPapersModelTest SLF4J: Failed to load class "org.slf4j.impl.StaticLoggerBinder". SLF4J: Defaulting to no-operation (NOP) logger implementation SLF4J: See http://www.slf4j.org/codes.html#StaticLoggerBinder for further details. -[INFO] Tests run: 13, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 10.848 s - in uk.ac.cam.ch.wwmm.oscarMEMM.Oscar4RegressionTest -[INFO] Running uk.ac.cam.ch.wwmm.oscarMEMM.MEMMRecogniserTest -[INFO] Tests run: 31, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 54.383 s - in uk.ac.cam.ch.wwmm.oscarMEMM.MEMMRecogniserTest +[INFO] Tests run: 3, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 5.265 s - in uk.ac.cam.ch.wwmm.oscarMEMM.models.ChemPapersModelTest +[INFO] Running uk.ac.cam.ch.wwmm.oscarMEMM.models.PubMedModelTest +[INFO] Tests run: 3, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 3.045 s - in uk.ac.cam.ch.wwmm.oscarMEMM.models.PubMedModelTest [INFO] Running uk.ac.cam.ch.wwmm.oscarMEMM.rescorer.ProbabilityConvertorTest [INFO] Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0 s - in uk.ac.cam.ch.wwmm.oscarMEMM.rescorer.ProbabilityConvertorTest -[INFO] Running uk.ac.cam.ch.wwmm.oscarMEMM.memm.MEMMModelTest -[INFO] Tests run: 5, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.868 s - in uk.ac.cam.ch.wwmm.oscarMEMM.memm.MEMMModelTest -[INFO] Running uk.ac.cam.ch.wwmm.oscarMEMM.models.PubMedModelTest -[INFO] Tests run: 3, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 2.369 s - in uk.ac.cam.ch.wwmm.oscarMEMM.models.PubMedModelTest -[INFO] Running uk.ac.cam.ch.wwmm.oscarMEMM.models.ChemPapersModelTest -[INFO] Tests run: 3, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 2.069 s - in uk.ac.cam.ch.wwmm.oscarMEMM.models.ChemPapersModelTest +[INFO] Running uk.ac.cam.ch.wwmm.oscarMEMM.MEMMRecogniserTest +[INFO] Tests run: 31, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 72.032 s - in uk.ac.cam.ch.wwmm.oscarMEMM.MEMMRecogniserTest +[INFO] Running uk.ac.cam.ch.wwmm.oscarMEMM.Oscar4RegressionTest +[INFO] Tests run: 13, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 9.141 s - in uk.ac.cam.ch.wwmm.oscarMEMM.Oscar4RegressionTest [INFO] Running uk.ac.cam.ch.wwmm.oscarMEMM.ResourceGetterTest [INFO] Tests run: 2, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0 s - in uk.ac.cam.ch.wwmm.oscarMEMM.ResourceGetterTest [INFO] @@ -2578,7 +2621,7 @@ SLF4J: Failed to load class "org.slf4j.impl.StaticLoggerBinder". SLF4J: Defaulting to no-operation (NOP) logger implementation SLF4J: See http://www.slf4j.org/codes.html#StaticLoggerBinder for further details. -[INFO] Tests run: 22, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 112.824 s - in uk.ac.cam.ch.wwmm.oscarpattern.PatternRecogniserTest +[INFO] Tests run: 22, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 109.536 s - in uk.ac.cam.ch.wwmm.oscarpattern.PatternRecogniserTest [INFO] [INFO] Results: [INFO] @@ -2608,13 +2651,13 @@ [INFO] ------------------------------------------------------- [INFO] T E S T S [INFO] ------------------------------------------------------- +[INFO] Running uk.ac.cam.ch.wwmm.oscar.opsin.OpsinDictionaryTest +[INFO] Tests run: 5, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 4.92 s - in uk.ac.cam.ch.wwmm.oscar.opsin.OpsinDictionaryTest [INFO] Running uk.ac.cam.ch.wwmm.oscar.opsin.OpsinResolutionTest SLF4J: Failed to load class "org.slf4j.impl.StaticLoggerBinder". SLF4J: Defaulting to no-operation (NOP) logger implementation SLF4J: See http://www.slf4j.org/codes.html#StaticLoggerBinder for further details. -[INFO] Tests run: 2, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 3.394 s - in uk.ac.cam.ch.wwmm.oscar.opsin.OpsinResolutionTest -[INFO] Running uk.ac.cam.ch.wwmm.oscar.opsin.OpsinDictionaryTest -[INFO] Tests run: 5, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.07 s - in uk.ac.cam.ch.wwmm.oscar.opsin.OpsinDictionaryTest +[INFO] Tests run: 2, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 3.985 s - in uk.ac.cam.ch.wwmm.oscar.opsin.OpsinResolutionTest [INFO] [INFO] Results: [INFO] @@ -2648,7 +2691,7 @@ SLF4J: Failed to load class "org.slf4j.impl.StaticLoggerBinder". SLF4J: Defaulting to no-operation (NOP) logger implementation SLF4J: See http://www.slf4j.org/codes.html#StaticLoggerBinder for further details. -[INFO] Tests run: 18, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 83.752 s - in uk.ac.cam.ch.wwmm.oscar.OscarTest +[INFO] Tests run: 18, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 134.136 s - in uk.ac.cam.ch.wwmm.oscar.OscarTest [INFO] [INFO] Results: [INFO] @@ -2679,7 +2722,7 @@ [INFO] T E S T S [INFO] ------------------------------------------------------- [INFO] Running uk.ac.cam.ch.wwmm.oscarpreprocessor.InputAnalyzerTest -[INFO] Tests run: 2, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.066 s - in uk.ac.cam.ch.wwmm.oscarpreprocessor.InputAnalyzerTest +[INFO] Tests run: 2, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.104 s - in uk.ac.cam.ch.wwmm.oscarpreprocessor.InputAnalyzerTest [INFO] [INFO] Results: [INFO] @@ -2730,19 +2773,19 @@ [INFO] ------------------------------------------------------- [INFO] T E S T S [INFO] ------------------------------------------------------- +[INFO] Running uk.ac.cam.ch.wwmm.oscardata.RegexValidationTest +[INFO] Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.262 s - in uk.ac.cam.ch.wwmm.oscardata.RegexValidationTest [INFO] Running uk.ac.cam.ch.wwmm.oscardata.DataAnnotationTest SLF4J: Failed to load class "org.slf4j.impl.StaticLoggerBinder". SLF4J: Defaulting to no-operation (NOP) logger implementation SLF4J: See http://www.slf4j.org/codes.html#StaticLoggerBinder for further details. -[INFO] Tests run: 2, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.975 s - in uk.ac.cam.ch.wwmm.oscardata.DataAnnotationTest +[INFO] Tests run: 2, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 1.646 s - in uk.ac.cam.ch.wwmm.oscardata.DataAnnotationTest [INFO] Running uk.ac.cam.ch.wwmm.oscardata.OscarDataTest -[INFO] Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.004 s - in uk.ac.cam.ch.wwmm.oscardata.OscarDataTest -[INFO] Running uk.ac.cam.ch.wwmm.oscardata.RegexValidationTest -[INFO] Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.018 s - in uk.ac.cam.ch.wwmm.oscardata.RegexValidationTest +[INFO] Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.014 s - in uk.ac.cam.ch.wwmm.oscardata.OscarDataTest [INFO] Running uk.ac.cam.ch.wwmm.oscardata.RPNodeTest -[INFO] Tests run: 5, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.005 s - in uk.ac.cam.ch.wwmm.oscardata.RPNodeTest +[INFO] Tests run: 5, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.009 s - in uk.ac.cam.ch.wwmm.oscardata.RPNodeTest [INFO] Running uk.ac.cam.ch.wwmm.oscardata.DataParserTest -[INFO] Tests run: 10, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.097 s - in uk.ac.cam.ch.wwmm.oscardata.DataParserTest +[INFO] Tests run: 10, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.212 s - in uk.ac.cam.ch.wwmm.oscardata.DataParserTest [INFO] [INFO] Results: [INFO] @@ -2751,24 +2794,24 @@ [INFO] ------------------------------------------------------------------------ [INFO] Reactor Summary for oscar4-parent 5.2.0: [INFO] -[INFO] oscar4-parent ...................................... SUCCESS [ 0.203 s] -[INFO] oscar4-core ........................................ SUCCESS [ 10.339 s] -[INFO] Chemical Name Dictionaries ......................... SUCCESS [ 10.279 s] -[INFO] oscar4-obo ......................................... SUCCESS [ 20.058 s] -[INFO] oscar4-tokenizer ................................... SUCCESS [ 10.030 s] -[INFO] oscar4-recogniser-core ............................. SUCCESS [ 40.036 s] -[INFO] oscar4-memmrecogniser .............................. SUCCESS [01:20 min] +[INFO] oscar4-parent ...................................... SUCCESS [ 0.360 s] +[INFO] oscar4-core ........................................ SUCCESS [ 10.609 s] +[INFO] Chemical Name Dictionaries ......................... SUCCESS [ 10.064 s] +[INFO] oscar4-obo ......................................... SUCCESS [ 30.059 s] +[INFO] oscar4-tokenizer ................................... SUCCESS [ 10.048 s] +[INFO] oscar4-recogniser-core ............................. SUCCESS [ 40.062 s] +[INFO] oscar4-memmrecogniser .............................. SUCCESS [01:40 min] [INFO] oscar4-patternrecogniser ........................... SUCCESS [02:00 min] -[INFO] oscar4-opsin ....................................... SUCCESS [ 10.145 s] -[INFO] oscar4-api ......................................... SUCCESS [01:30 min] -[INFO] oscar4-preprocessor ................................ SUCCESS [ 10.030 s] -[INFO] oscar4-formatter ................................... SUCCESS [ 0.016 s] -[INFO] oscar4-data ........................................ SUCCESS [ 10.031 s] +[INFO] oscar4-opsin ....................................... SUCCESS [ 20.340 s] +[INFO] oscar4-api ......................................... SUCCESS [02:20 min] +[INFO] oscar4-preprocessor ................................ SUCCESS [ 10.050 s] +[INFO] oscar4-formatter ................................... SUCCESS [ 0.041 s] +[INFO] oscar4-data ........................................ SUCCESS [ 10.080 s] [INFO] ------------------------------------------------------------------------ [INFO] BUILD SUCCESS [INFO] ------------------------------------------------------------------------ -[INFO] Total time: 06:51 min -[INFO] Finished at: 2024-07-03T14:31:35-12:00 +[INFO] Total time: 08:22 min +[INFO] Finished at: 2023-06-02T10:21:12+14:00 [INFO] ------------------------------------------------------------------------  create-stamp debian/debhelper-build-stamp dh_prep @@ -2951,24 +2994,24 @@ [INFO] ------------------------------------------------------------------------ [INFO] Reactor Summary for oscar4-parent 5.2.0: [INFO] -[INFO] oscar4-parent ...................................... SUCCESS [ 0.433 s] -[INFO] oscar4-core ........................................ SUCCESS [ 0.055 s] -[INFO] Chemical Name Dictionaries ......................... SUCCESS [ 0.044 s] -[INFO] oscar4-obo ......................................... SUCCESS [ 0.095 s] -[INFO] oscar4-tokenizer ................................... SUCCESS [ 0.023 s] -[INFO] oscar4-recogniser-core ............................. SUCCESS [ 0.037 s] -[INFO] oscar4-memmrecogniser .............................. SUCCESS [ 0.029 s] -[INFO] oscar4-patternrecogniser ........................... SUCCESS [ 0.022 s] -[INFO] oscar4-opsin ....................................... SUCCESS [ 0.022 s] -[INFO] oscar4-api ......................................... SUCCESS [ 0.023 s] -[INFO] oscar4-preprocessor ................................ SUCCESS [ 0.021 s] -[INFO] oscar4-formatter ................................... SUCCESS [ 0.020 s] -[INFO] oscar4-data ........................................ SUCCESS [ 0.022 s] +[INFO] oscar4-parent ...................................... SUCCESS [ 0.509 s] +[INFO] oscar4-core ........................................ SUCCESS [ 0.070 s] +[INFO] Chemical Name Dictionaries ......................... SUCCESS [ 0.066 s] +[INFO] oscar4-obo ......................................... SUCCESS [ 0.097 s] +[INFO] oscar4-tokenizer ................................... SUCCESS [ 0.046 s] +[INFO] oscar4-recogniser-core ............................. SUCCESS [ 0.065 s] +[INFO] oscar4-memmrecogniser .............................. SUCCESS [ 0.052 s] +[INFO] oscar4-patternrecogniser ........................... SUCCESS [ 0.046 s] +[INFO] oscar4-opsin ....................................... SUCCESS [ 0.045 s] +[INFO] oscar4-api ......................................... SUCCESS [ 0.044 s] +[INFO] oscar4-preprocessor ................................ SUCCESS [ 0.038 s] +[INFO] oscar4-formatter ................................... SUCCESS [ 0.038 s] +[INFO] oscar4-data ........................................ SUCCESS [ 0.041 s] [INFO] ------------------------------------------------------------------------ [INFO] BUILD SUCCESS [INFO] ------------------------------------------------------------------------ -[INFO] Total time: 1.085 s -[INFO] Finished at: 2024-07-03T14:31:39-12:00 +[INFO] Total time: 1.429 s +[INFO] Finished at: 2023-06-02T10:21:15+14:00 [INFO] ------------------------------------------------------------------------  mh_resolve_dependencies --non-interactive --offline --build -pliboscar4-java --base-directory=/build/oscar4-5.2.0\+dfsg --non-explore Analysing pom.xml... @@ -3018,12 +3061,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/11234/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/11234/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/2236 and its subdirectories -I: Current time: Wed Jul 3 14:31:53 -12 2024 -I: pbuilder-time-stamp: 1720060313 +I: removing directory /srv/workspace/pbuilder/11234 and its subdirectories +I: Current time: Fri Jun 2 10:21:33 +14 2023 +I: pbuilder-time-stamp: 1685650893