Diff of the two buildlogs: -- --- b1/build.log 2023-04-08 12:51:52.991897493 +0000 +++ b2/build.log 2023-04-08 13:03:10.901338563 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Sat Apr 8 00:37:34 -12 2023 -I: pbuilder-time-stamp: 1680957454 +I: Current time: Sat May 11 09:14:57 +14 2024 +I: pbuilder-time-stamp: 1715368497 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bookworm-reproducible-base.tgz] I: copying local configuration @@ -16,7 +16,7 @@ I: copying [./seqan-needle_1.0.1.0.0.git.3011926+ds.orig.tar.xz] I: copying [./seqan-needle_1.0.1.0.0.git.3011926+ds-4.debian.tar.xz] I: Extracting source -gpgv: Signature made Wed Nov 23 22:43:29 2022 -12 +gpgv: Signature made Fri Nov 25 00:43:29 2022 +14 gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key @@ -31,11 +31,20 @@ dpkg-source: info: applying create_doc_without_previous_binary_build.patch I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/31443/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/28599/tmp/hooks/D01_modify_environment starting +debug: Running on codethink15-arm64. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +lrwxrwxrwx 1 root root 4 Jan 6 2023 /bin/sh -> dash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/28599/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/28599/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME='pbuilder2' BUILD_ARCH='arm64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=8' @@ -45,38 +54,38 @@ IFS=' ' LANG='C' - LANGUAGE='en_US:en' + LANGUAGE='nl_BE:nl' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' + PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' - PPID='31443' + PPID='28599' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.46g0RX1D/pbuilderrc_2Pgs --distribution bookworm --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bookworm-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.46g0RX1D/b1 --logfile b1/build.log seqan-needle_1.0.1.0.0.git.3011926+ds-4.dsc' + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.46g0RX1D/pbuilderrc_Mmyl --distribution bookworm --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bookworm-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.46g0RX1D/b2 --logfile b2/build.log --extrapackages usrmerge seqan-needle_1.0.1.0.0.git.3011926+ds-4.dsc' SUDO_GID='117' SUDO_UID='110' SUDO_USER='jenkins' TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' + TZ='/usr/share/zoneinfo/Etc/GMT-14' USER='root' USERNAME='root' _='/usr/bin/systemd-run' http_proxy='http://192.168.101.16:3128' I: uname -a - Linux codethink12-arm64 4.15.0-208-generic #220-Ubuntu SMP Mon Mar 20 14:28:12 UTC 2023 aarch64 GNU/Linux + Linux i-capture-the-hostname 4.15.0-208-generic #220-Ubuntu SMP Mon Mar 20 14:28:12 UTC 2023 aarch64 GNU/Linux I: ls -l /bin - lrwxrwxrwx 1 root root 7 Apr 5 22:25 /bin -> usr/bin -I: user script /srv/workspace/pbuilder/31443/tmp/hooks/D02_print_environment finished + lrwxrwxrwx 1 root root 7 May 10 06:47 /bin -> usr/bin +I: user script /srv/workspace/pbuilder/28599/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -190,7 +199,7 @@ Get: 64 http://deb.debian.org/debian bookworm/main arm64 pkgconf-bin arm64 1.8.1-1 [28.9 kB] Get: 65 http://deb.debian.org/debian bookworm/main arm64 pkgconf arm64 1.8.1-1 [25.9 kB] Get: 66 http://deb.debian.org/debian bookworm/main arm64 pkg-config arm64 1.8.1-1 [13.7 kB] -Fetched 78.1 MB in 2s (42.2 MB/s) +Fetched 78.1 MB in 3s (29.6 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libproc2-0:arm64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19616 files and directories currently installed.) @@ -468,8 +477,17 @@ Writing extended state information... Building tag database... -> Finished parsing the build-deps +Reading package lists... +Building dependency tree... +Reading state information... +usrmerge is already the newest version (35). +0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: Building the package -I: Running cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../seqan-needle_1.0.1.0.0.git.3011926+ds-4_source.changes +I: user script /srv/workspace/pbuilder/28599/tmp/hooks/A99_set_merged_usr starting +Re-configuring usrmerge... +I: user script /srv/workspace/pbuilder/28599/tmp/hooks/A99_set_merged_usr finished +hostname: Temporary failure in name resolution +I: Running cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../seqan-needle_1.0.1.0.0.git.3011926+ds-4_source.changes dpkg-buildpackage: info: source package seqan-needle dpkg-buildpackage: info: source version 1.0.1.0.0.git.3011926+ds-4 dpkg-buildpackage: info: source distribution unstable @@ -484,7 +502,7 @@ dh_update_autotools_config dh_autoreconf debian/rules override_dh_auto_configure -make[1]: Entering directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds' +make[1]: Map '/build/seqan-needle-1.0.1.0.0.git.3011926+ds' wordt binnengegaan rm -Rf lib/seqan3 dh_auto_configure -- -DSEQAN3_NO_LEMON=OFF cd obj-aarch64-linux-gnu && cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DFETCHCONTENT_FULLY_DISCONNECTED=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run -DCMAKE_SKIP_INSTALL_ALL_DEPENDENCY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/aarch64-linux-gnu -DSEQAN3_NO_LEMON=OFF .. @@ -518,23 +536,23 @@ -- Build files have been written to: /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu -make[1]: Leaving directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds' +make[1]: Map '/build/seqan-needle-1.0.1.0.0.git.3011926+ds' wordt verlaten debian/rules override_dh_auto_build-arch -make[1]: Entering directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds' +make[1]: Map '/build/seqan-needle-1.0.1.0.0.git.3011926+ds' wordt binnengegaan dh_auto_build --arch cd obj-aarch64-linux-gnu && make -j8 "INSTALL=install --strip-program=true" VERBOSE=1 -make[2]: Entering directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' +make[2]: Map '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' wordt binnengegaan /usr/bin/cmake -S/build/seqan-needle-1.0.1.0.0.git.3011926+ds -B/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/CMakeFiles /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu//CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all -make[3]: Entering directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' +make[3]: Map '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' wordt binnengegaan make -f src/CMakeFiles/needle_lib.dir/build.make src/CMakeFiles/needle_lib.dir/depend -make[4]: Entering directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' +make[4]: Map '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' wordt binnengegaan cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/seqan-needle-1.0.1.0.0.git.3011926+ds /build/seqan-needle-1.0.1.0.0.git.3011926+ds/src /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/src /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/src/CMakeFiles/needle_lib.dir/DependInfo.cmake --color= -make[4]: Leaving directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' +make[4]: Map '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' wordt verlaten make -f src/CMakeFiles/needle_lib.dir/build.make src/CMakeFiles/needle_lib.dir/build -make[4]: Entering directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' -[ 20%] Building CXX object src/CMakeFiles/needle_lib.dir/ibf.cpp.o +make[4]: Map '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' wordt binnengegaan +[ 40%] Building CXX object src/CMakeFiles/needle_lib.dir/ibf.cpp.o [ 40%] Building CXX object src/CMakeFiles/needle_lib.dir/estimate.cpp.o cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -I/build/seqan-needle-1.0.1.0.0.git.3011926+ds/src/../include -I/build/seqan-needle-1.0.1.0.0.git.3011926+ds/lib/robin-hood-hashing/src/include -isystem /usr/include/seqan3/submodules/sdsl-lite/include -g -O2 -ffile-prefix-map=/build/seqan-needle-1.0.1.0.0.git.3011926+ds=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++20 -fopenmp -MD -MT src/CMakeFiles/needle_lib.dir/ibf.cpp.o -MF CMakeFiles/needle_lib.dir/ibf.cpp.o.d -o CMakeFiles/needle_lib.dir/ibf.cpp.o -c /build/seqan-needle-1.0.1.0.0.git.3011926+ds/src/ibf.cpp cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -I/build/seqan-needle-1.0.1.0.0.git.3011926+ds/src/../include -I/build/seqan-needle-1.0.1.0.0.git.3011926+ds/lib/robin-hood-hashing/src/include -isystem /usr/include/seqan3/submodules/sdsl-lite/include -g -O2 -ffile-prefix-map=/build/seqan-needle-1.0.1.0.0.git.3011926+ds=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++20 -fopenmp -MD -MT src/CMakeFiles/needle_lib.dir/estimate.cpp.o -MF CMakeFiles/needle_lib.dir/estimate.cpp.o.d -o CMakeFiles/needle_lib.dir/estimate.cpp.o -c /build/seqan-needle-1.0.1.0.0.git.3011926+ds/src/estimate.cpp @@ -543,32 +561,32 @@ cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/needle_lib.dir/link.txt --verbose=1 /usr/bin/ar qc ../lib/libneedle_lib.a CMakeFiles/needle_lib.dir/ibf.cpp.o CMakeFiles/needle_lib.dir/estimate.cpp.o /usr/bin/ranlib ../lib/libneedle_lib.a -make[4]: Leaving directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' +make[4]: Map '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' wordt verlaten [ 60%] Built target needle_lib make -f src/CMakeFiles/needle.dir/build.make src/CMakeFiles/needle.dir/depend -make[4]: Entering directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' +make[4]: Map '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' wordt binnengegaan cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/seqan-needle-1.0.1.0.0.git.3011926+ds /build/seqan-needle-1.0.1.0.0.git.3011926+ds/src /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/src /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/src/CMakeFiles/needle.dir/DependInfo.cmake --color= -make[4]: Leaving directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' +make[4]: Map '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' wordt verlaten make -f src/CMakeFiles/needle.dir/build.make src/CMakeFiles/needle.dir/build -make[4]: Entering directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' +make[4]: Map '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' wordt binnengegaan [ 80%] Building CXX object src/CMakeFiles/needle.dir/main.cpp.o cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -I/build/seqan-needle-1.0.1.0.0.git.3011926+ds/src/../include -I/build/seqan-needle-1.0.1.0.0.git.3011926+ds/lib/robin-hood-hashing/src/include -isystem /usr/include/seqan3/submodules/sdsl-lite/include -g -O2 -ffile-prefix-map=/build/seqan-needle-1.0.1.0.0.git.3011926+ds=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++20 -fopenmp -MD -MT src/CMakeFiles/needle.dir/main.cpp.o -MF CMakeFiles/needle.dir/main.cpp.o.d -o CMakeFiles/needle.dir/main.cpp.o -c /build/seqan-needle-1.0.1.0.0.git.3011926+ds/src/main.cpp [100%] Linking CXX executable ../bin/needle cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/needle.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/seqan-needle-1.0.1.0.0.git.3011926+ds=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now CMakeFiles/needle.dir/main.cpp.o -o ../bin/needle ../lib/libneedle_lib.a /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so -lrt /usr/lib/gcc/aarch64-linux-gnu/12/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a -make[4]: Leaving directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' +make[4]: Map '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' wordt verlaten [100%] Built target needle -make[3]: Leaving directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' +make[3]: Map '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' wordt verlaten /usr/bin/cmake -E cmake_progress_start /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/CMakeFiles 0 -make[2]: Leaving directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' +make[2]: Map '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' wordt verlaten obj-*/bin/needle --export-help man > debian/needle.1 obj-*/bin/needle count --export-help man > debian/needle-count.1 obj-*/bin/needle estimate --export-help man > debian/needle-estimate.1 obj-*/bin/needle ibf --export-help man > debian/needle-ibf.1 obj-*/bin/needle minimiser --export-help man > debian/needle-minimiser.1 -make[1]: Leaving directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds' +make[1]: Map '/build/seqan-needle-1.0.1.0.0.git.3011926+ds' wordt verlaten debian/rules override_dh_auto_build-indep -make[1]: Entering directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds' +make[1]: Map '/build/seqan-needle-1.0.1.0.0.git.3011926+ds' wordt binnengegaan doxygen doc/doxygen_cfg warning: tag INCLUDE_PATH: include path '${CMAKE_SOURCE_DIR}/include' does not exist warning: source '${CMAKE_SOURCE_DIR}/include' is not a readable file or directory... skipping. @@ -703,133 +721,133 @@ Running plantuml with JAVA... lookup cache used 116/65536 hits=249 misses=123 finished... -make[1]: Leaving directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds' +make[1]: Map '/build/seqan-needle-1.0.1.0.0.git.3011926+ds' wordt verlaten debian/rules override_dh_auto_test-indep -make[1]: Entering directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds' +make[1]: Map '/build/seqan-needle-1.0.1.0.0.git.3011926+ds' wordt binnengegaan echo "Do Nothing" Do Nothing -make[1]: Leaving directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds' +make[1]: Map '/build/seqan-needle-1.0.1.0.0.git.3011926+ds' wordt verlaten dh_auto_test -Nseqan-needle-doc cd obj-aarch64-linux-gnu && make -j8 test ARGS\+=--verbose ARGS\+=-j8 -make[1]: Entering directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' +make[1]: Map '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' wordt binnengegaan Running tests... /usr/bin/ctest --force-new-ctest-process --verbose -j8 UpdateCTestConfiguration from :/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/DartConfiguration.tcl UpdateCTestConfiguration from :/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/DartConfiguration.tcl Test project /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu Constructing a list of tests -gmake[2]: Entering directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test' -gmake[2]: warning: jobserver unavailable: using -j1. Add '+' to parent make rule. +gmake[2]: Map '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test' wordt binnengegaan +gmake[2]: Waarschuwing: taakserver is onbeschikbaar: '-j1' wordt gebruikt. Voeg '+' toe aan de ouderregel. cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu && /usr/bin/gmake -f CMakeFiles/Makefile2 test/CMakeFiles/api_test.dir/rule -gmake[3]: Entering directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' +gmake[3]: Map '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' wordt binnengegaan /usr/bin/cmake -S/build/seqan-needle-1.0.1.0.0.git.3011926+ds -B/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/CMakeFiles 13 /usr/bin/gmake -f CMakeFiles/Makefile2 test/CMakeFiles/api_test.dir/all -gmake[4]: Entering directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' +gmake[4]: Map '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' wordt binnengegaan /usr/bin/gmake -f src/CMakeFiles/needle_lib.dir/build.make src/CMakeFiles/needle_lib.dir/depend -gmake[5]: Entering directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' +gmake[5]: Map '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' wordt binnengegaan cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/seqan-needle-1.0.1.0.0.git.3011926+ds /build/seqan-needle-1.0.1.0.0.git.3011926+ds/src /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/src /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/src/CMakeFiles/needle_lib.dir/DependInfo.cmake --color= Dependencies file "src/CMakeFiles/needle_lib.dir/estimate.cpp.o.d" is newer than depends file "/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/src/CMakeFiles/needle_lib.dir/compiler_depend.internal". Dependencies file "src/CMakeFiles/needle_lib.dir/ibf.cpp.o.d" is newer than depends file "/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/src/CMakeFiles/needle_lib.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target needle_lib -gmake[5]: Leaving directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' +gmake[5]: Map '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' wordt verlaten /usr/bin/gmake -f src/CMakeFiles/needle_lib.dir/build.make src/CMakeFiles/needle_lib.dir/build -gmake[5]: Entering directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' -gmake[5]: Nothing to be done for 'src/CMakeFiles/needle_lib.dir/build'. -gmake[5]: Leaving directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' +gmake[5]: Map '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' wordt binnengegaan +gmake[5]: Er hoeft niets gedaan te worden voor 'src/CMakeFiles/needle_lib.dir/build'. +gmake[5]: Map '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' wordt verlaten [ 23%] Built target needle_lib /usr/bin/gmake -f test/api/CMakeFiles/minimiser_test.dir/build.make test/api/CMakeFiles/minimiser_test.dir/depend -gmake[5]: Entering directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' +gmake[5]: Map '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' wordt binnengegaan cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/seqan-needle-1.0.1.0.0.git.3011926+ds /build/seqan-needle-1.0.1.0.0.git.3011926+ds/test/api /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/api /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/api/CMakeFiles/minimiser_test.dir/DependInfo.cmake --color= -gmake[5]: Leaving directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' +gmake[5]: Map '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' wordt verlaten /usr/bin/gmake -f test/api/CMakeFiles/minimiser_test.dir/build.make test/api/CMakeFiles/minimiser_test.dir/build -gmake[5]: Entering directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' +gmake[5]: Map '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' wordt binnengegaan [ 30%] Building CXX object test/api/CMakeFiles/minimiser_test.dir/minimiser_test.cpp.o cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/api && /usr/bin/c++ -DBINDIR=\"/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/bin/\" -DDATADIR=\"/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/data/\" -DDATA_INPUT_DIR=\"/build/seqan-needle-1.0.1.0.0.git.3011926+ds/test/data/\" -DOUTPUTDIR=\"/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/output/\" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -I/build/seqan-needle-1.0.1.0.0.git.3011926+ds/test/api/SEQAN3_CLONE_DIR-NOTFOUND/test/include -I/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/vendor/googletest/googletest/include -I/build/seqan-needle-1.0.1.0.0.git.3011926+ds/src/../include -I/build/seqan-needle-1.0.1.0.0.git.3011926+ds/lib/robin-hood-hashing/src/include -isystem /usr/include/seqan3/submodules/sdsl-lite/include -g -O2 -ffile-prefix-map=/build/seqan-needle-1.0.1.0.0.git.3011926+ds=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++20 -fopenmp -MD -MT test/api/CMakeFiles/minimiser_test.dir/minimiser_test.cpp.o -MF CMakeFiles/minimiser_test.dir/minimiser_test.cpp.o.d -o CMakeFiles/minimiser_test.dir/minimiser_test.cpp.o -c /build/seqan-needle-1.0.1.0.0.git.3011926+ds/test/api/minimiser_test.cpp [ 38%] Linking CXX executable minimiser_test cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/api && /usr/bin/cmake -E cmake_link_script CMakeFiles/minimiser_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/seqan-needle-1.0.1.0.0.git.3011926+ds=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now CMakeFiles/minimiser_test.dir/minimiser_test.cpp.o -o minimiser_test ../../lib/libneedle_lib.a -lgtest -lgtest_main /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so -lrt /usr/lib/gcc/aarch64-linux-gnu/12/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a -gmake[5]: Leaving directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' +gmake[5]: Map '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' wordt verlaten [ 38%] Built target minimiser_test /usr/bin/gmake -f test/api/CMakeFiles/count_test.dir/build.make test/api/CMakeFiles/count_test.dir/depend -gmake[5]: Entering directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' +gmake[5]: Map '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' wordt binnengegaan cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/seqan-needle-1.0.1.0.0.git.3011926+ds /build/seqan-needle-1.0.1.0.0.git.3011926+ds/test/api /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/api /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/api/CMakeFiles/count_test.dir/DependInfo.cmake --color= -gmake[5]: Leaving directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' +gmake[5]: Map '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' wordt verlaten /usr/bin/gmake -f test/api/CMakeFiles/count_test.dir/build.make test/api/CMakeFiles/count_test.dir/build -gmake[5]: Entering directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' +gmake[5]: Map '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' wordt binnengegaan [ 46%] Building CXX object test/api/CMakeFiles/count_test.dir/count_test.cpp.o cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/api && /usr/bin/c++ -DBINDIR=\"/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/bin/\" -DDATADIR=\"/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/data/\" -DDATA_INPUT_DIR=\"/build/seqan-needle-1.0.1.0.0.git.3011926+ds/test/data/\" -DOUTPUTDIR=\"/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/output/\" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -I/build/seqan-needle-1.0.1.0.0.git.3011926+ds/test/api/SEQAN3_CLONE_DIR-NOTFOUND/test/include -I/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/vendor/googletest/googletest/include -I/build/seqan-needle-1.0.1.0.0.git.3011926+ds/src/../include -I/build/seqan-needle-1.0.1.0.0.git.3011926+ds/lib/robin-hood-hashing/src/include -isystem /usr/include/seqan3/submodules/sdsl-lite/include -g -O2 -ffile-prefix-map=/build/seqan-needle-1.0.1.0.0.git.3011926+ds=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++20 -fopenmp -MD -MT test/api/CMakeFiles/count_test.dir/count_test.cpp.o -MF CMakeFiles/count_test.dir/count_test.cpp.o.d -o CMakeFiles/count_test.dir/count_test.cpp.o -c /build/seqan-needle-1.0.1.0.0.git.3011926+ds/test/api/count_test.cpp [ 53%] Linking CXX executable count_test cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/api && /usr/bin/cmake -E cmake_link_script CMakeFiles/count_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/seqan-needle-1.0.1.0.0.git.3011926+ds=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now CMakeFiles/count_test.dir/count_test.cpp.o -o count_test ../../lib/libneedle_lib.a -lgtest -lgtest_main /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so -lrt /usr/lib/gcc/aarch64-linux-gnu/12/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a -gmake[5]: Leaving directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' +gmake[5]: Map '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' wordt verlaten [ 53%] Built target count_test /usr/bin/gmake -f test/api/CMakeFiles/estimate_test.dir/build.make test/api/CMakeFiles/estimate_test.dir/depend -gmake[5]: Entering directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' +gmake[5]: Map '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' wordt binnengegaan cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/seqan-needle-1.0.1.0.0.git.3011926+ds /build/seqan-needle-1.0.1.0.0.git.3011926+ds/test/api /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/api /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/api/CMakeFiles/estimate_test.dir/DependInfo.cmake --color= -gmake[5]: Leaving directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' +gmake[5]: Map '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' wordt verlaten /usr/bin/gmake -f test/api/CMakeFiles/estimate_test.dir/build.make test/api/CMakeFiles/estimate_test.dir/build -gmake[5]: Entering directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' +gmake[5]: Map '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' wordt binnengegaan [ 61%] Building CXX object test/api/CMakeFiles/estimate_test.dir/estimate_test.cpp.o cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/api && /usr/bin/c++ -DBINDIR=\"/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/bin/\" -DDATADIR=\"/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/data/\" -DDATA_INPUT_DIR=\"/build/seqan-needle-1.0.1.0.0.git.3011926+ds/test/data/\" -DOUTPUTDIR=\"/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/output/\" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -I/build/seqan-needle-1.0.1.0.0.git.3011926+ds/test/api/SEQAN3_CLONE_DIR-NOTFOUND/test/include -I/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/vendor/googletest/googletest/include -I/build/seqan-needle-1.0.1.0.0.git.3011926+ds/src/../include -I/build/seqan-needle-1.0.1.0.0.git.3011926+ds/lib/robin-hood-hashing/src/include -isystem /usr/include/seqan3/submodules/sdsl-lite/include -g -O2 -ffile-prefix-map=/build/seqan-needle-1.0.1.0.0.git.3011926+ds=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++20 -fopenmp -MD -MT test/api/CMakeFiles/estimate_test.dir/estimate_test.cpp.o -MF CMakeFiles/estimate_test.dir/estimate_test.cpp.o.d -o CMakeFiles/estimate_test.dir/estimate_test.cpp.o -c /build/seqan-needle-1.0.1.0.0.git.3011926+ds/test/api/estimate_test.cpp [ 69%] Linking CXX executable estimate_test cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/api && /usr/bin/cmake -E cmake_link_script CMakeFiles/estimate_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/seqan-needle-1.0.1.0.0.git.3011926+ds=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now CMakeFiles/estimate_test.dir/estimate_test.cpp.o -o estimate_test ../../lib/libneedle_lib.a -lgtest -lgtest_main /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so -lrt /usr/lib/gcc/aarch64-linux-gnu/12/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a -gmake[5]: Leaving directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' +gmake[5]: Map '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' wordt verlaten [ 69%] Built target estimate_test /usr/bin/gmake -f test/api/CMakeFiles/ibf_test.dir/build.make test/api/CMakeFiles/ibf_test.dir/depend -gmake[5]: Entering directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' +gmake[5]: Map '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' wordt binnengegaan cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/seqan-needle-1.0.1.0.0.git.3011926+ds /build/seqan-needle-1.0.1.0.0.git.3011926+ds/test/api /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/api /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/api/CMakeFiles/ibf_test.dir/DependInfo.cmake --color= -gmake[5]: Leaving directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' +gmake[5]: Map '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' wordt verlaten /usr/bin/gmake -f test/api/CMakeFiles/ibf_test.dir/build.make test/api/CMakeFiles/ibf_test.dir/build -gmake[5]: Entering directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' +gmake[5]: Map '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' wordt binnengegaan [ 76%] Building CXX object test/api/CMakeFiles/ibf_test.dir/ibf_test.cpp.o cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/api && /usr/bin/c++ -DBINDIR=\"/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/bin/\" -DDATADIR=\"/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/data/\" -DDATA_INPUT_DIR=\"/build/seqan-needle-1.0.1.0.0.git.3011926+ds/test/data/\" -DOUTPUTDIR=\"/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/output/\" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -I/build/seqan-needle-1.0.1.0.0.git.3011926+ds/test/api/SEQAN3_CLONE_DIR-NOTFOUND/test/include -I/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/vendor/googletest/googletest/include -I/build/seqan-needle-1.0.1.0.0.git.3011926+ds/src/../include -I/build/seqan-needle-1.0.1.0.0.git.3011926+ds/lib/robin-hood-hashing/src/include -isystem /usr/include/seqan3/submodules/sdsl-lite/include -g -O2 -ffile-prefix-map=/build/seqan-needle-1.0.1.0.0.git.3011926+ds=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++20 -fopenmp -MD -MT test/api/CMakeFiles/ibf_test.dir/ibf_test.cpp.o -MF CMakeFiles/ibf_test.dir/ibf_test.cpp.o.d -o CMakeFiles/ibf_test.dir/ibf_test.cpp.o -c /build/seqan-needle-1.0.1.0.0.git.3011926+ds/test/api/ibf_test.cpp [ 84%] Linking CXX executable ibf_test cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/api && /usr/bin/cmake -E cmake_link_script CMakeFiles/ibf_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/seqan-needle-1.0.1.0.0.git.3011926+ds=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now CMakeFiles/ibf_test.dir/ibf_test.cpp.o -o ibf_test ../../lib/libneedle_lib.a -lgtest -lgtest_main /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so -lrt /usr/lib/gcc/aarch64-linux-gnu/12/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a -gmake[5]: Leaving directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' +gmake[5]: Map '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' wordt verlaten [ 84%] Built target ibf_test /usr/bin/gmake -f test/api/CMakeFiles/ibfmin_test.dir/build.make test/api/CMakeFiles/ibfmin_test.dir/depend -gmake[5]: Entering directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' +gmake[5]: Map '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' wordt binnengegaan cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/seqan-needle-1.0.1.0.0.git.3011926+ds /build/seqan-needle-1.0.1.0.0.git.3011926+ds/test/api /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/api /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/api/CMakeFiles/ibfmin_test.dir/DependInfo.cmake --color= -gmake[5]: Leaving directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' +gmake[5]: Map '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' wordt verlaten /usr/bin/gmake -f test/api/CMakeFiles/ibfmin_test.dir/build.make test/api/CMakeFiles/ibfmin_test.dir/build -gmake[5]: Entering directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' +gmake[5]: Map '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' wordt binnengegaan [ 92%] Building CXX object test/api/CMakeFiles/ibfmin_test.dir/ibfmin_test.cpp.o cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/api && /usr/bin/c++ -DBINDIR=\"/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/bin/\" -DDATADIR=\"/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/data/\" -DDATA_INPUT_DIR=\"/build/seqan-needle-1.0.1.0.0.git.3011926+ds/test/data/\" -DOUTPUTDIR=\"/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/output/\" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -I/build/seqan-needle-1.0.1.0.0.git.3011926+ds/test/api/SEQAN3_CLONE_DIR-NOTFOUND/test/include -I/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/vendor/googletest/googletest/include -I/build/seqan-needle-1.0.1.0.0.git.3011926+ds/src/../include -I/build/seqan-needle-1.0.1.0.0.git.3011926+ds/lib/robin-hood-hashing/src/include -isystem /usr/include/seqan3/submodules/sdsl-lite/include -g -O2 -ffile-prefix-map=/build/seqan-needle-1.0.1.0.0.git.3011926+ds=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++20 -fopenmp -MD -MT test/api/CMakeFiles/ibfmin_test.dir/ibfmin_test.cpp.o -MF CMakeFiles/ibfmin_test.dir/ibfmin_test.cpp.o.d -o CMakeFiles/ibfmin_test.dir/ibfmin_test.cpp.o -c /build/seqan-needle-1.0.1.0.0.git.3011926+ds/test/api/ibfmin_test.cpp [100%] Linking CXX executable ibfmin_test cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/api && /usr/bin/cmake -E cmake_link_script CMakeFiles/ibfmin_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/seqan-needle-1.0.1.0.0.git.3011926+ds=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now CMakeFiles/ibfmin_test.dir/ibfmin_test.cpp.o -o ibfmin_test ../../lib/libneedle_lib.a -lgtest -lgtest_main /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so -lrt /usr/lib/gcc/aarch64-linux-gnu/12/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a -gmake[5]: Leaving directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' +gmake[5]: Map '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' wordt verlaten [100%] Built target ibfmin_test /usr/bin/gmake -f test/CMakeFiles/api_test.dir/build.make test/CMakeFiles/api_test.dir/depend -gmake[5]: Entering directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' +gmake[5]: Map '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' wordt binnengegaan cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/seqan-needle-1.0.1.0.0.git.3011926+ds /build/seqan-needle-1.0.1.0.0.git.3011926+ds/test /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/CMakeFiles/api_test.dir/DependInfo.cmake --color= -gmake[5]: Leaving directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' +gmake[5]: Map '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' wordt verlaten /usr/bin/gmake -f test/CMakeFiles/api_test.dir/build.make test/CMakeFiles/api_test.dir/build -gmake[5]: Entering directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' -gmake[5]: Nothing to be done for 'test/CMakeFiles/api_test.dir/build'. -gmake[5]: Leaving directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' +gmake[5]: Map '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' wordt binnengegaan +gmake[5]: Er hoeft niets gedaan te worden voor 'test/CMakeFiles/api_test.dir/build'. +gmake[5]: Map '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' wordt verlaten [100%] Built target api_test -gmake[4]: Leaving directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' +gmake[4]: Map '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' wordt verlaten /usr/bin/cmake -E cmake_progress_start /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/CMakeFiles 0 -gmake[3]: Leaving directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' -gmake[2]: Leaving directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test' -gmake[2]: Entering directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test' -gmake[2]: warning: jobserver unavailable: using -j1. Add '+' to parent make rule. +gmake[3]: Map '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' wordt verlaten +gmake[2]: Map '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test' wordt verlaten +gmake[2]: Map '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test' wordt binnengegaan +gmake[2]: Waarschuwing: taakserver is onbeschikbaar: '-j1' wordt gebruikt. Voeg '+' toe aan de ouderregel. cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu && /usr/bin/gmake -f CMakeFiles/Makefile2 test/CMakeFiles/cli_test.dir/rule -gmake[3]: Entering directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' +gmake[3]: Map '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' wordt binnengegaan /usr/bin/cmake -S/build/seqan-needle-1.0.1.0.0.git.3011926+ds -B/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/CMakeFiles 60 /usr/bin/gmake -f CMakeFiles/Makefile2 test/CMakeFiles/cli_test.dir/all -gmake[4]: Entering directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' +gmake[4]: Map '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' wordt binnengegaan /usr/bin/gmake -f test/CMakeFiles/datasource--mini_gen.fasta.dir/build.make test/CMakeFiles/datasource--mini_gen.fasta.dir/depend -gmake[5]: Entering directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' +gmake[5]: Map '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' wordt binnengegaan cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/seqan-needle-1.0.1.0.0.git.3011926+ds /build/seqan-needle-1.0.1.0.0.git.3011926+ds/test /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/CMakeFiles/datasource--mini_gen.fasta.dir/DependInfo.cmake --color= -gmake[5]: Leaving directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' +gmake[5]: Map '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' wordt verlaten /usr/bin/gmake -f test/CMakeFiles/datasource--mini_gen.fasta.dir/build.make test/CMakeFiles/datasource--mini_gen.fasta.dir/build -gmake[5]: Entering directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' +gmake[5]: Map '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' wordt binnengegaan [ 1%] Creating directories for 'datasource--mini_gen.fasta' cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test && /usr/bin/cmake -Dcfgdir= -P /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/_datasources/tmp/datasource--mini_gen.fasta-mkdirs.cmake cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test && /usr/bin/cmake -E touch /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--mini_gen.fasta-stamp/datasource--mini_gen.fasta-mkdir @@ -861,34 +879,34 @@ cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test && /usr/bin/cmake -E make_directory /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/CMakeFiles cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test && /usr/bin/cmake -E touch /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/CMakeFiles/datasource--mini_gen.fasta-complete cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test && /usr/bin/cmake -E touch /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--mini_gen.fasta-stamp/datasource--mini_gen.fasta-done -gmake[5]: Leaving directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' +gmake[5]: Map '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' wordt verlaten [ 15%] Built target datasource--mini_gen.fasta /usr/bin/gmake -f src/CMakeFiles/needle_lib.dir/build.make src/CMakeFiles/needle_lib.dir/depend -gmake[5]: Entering directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' +gmake[5]: Map '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' wordt binnengegaan cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/seqan-needle-1.0.1.0.0.git.3011926+ds /build/seqan-needle-1.0.1.0.0.git.3011926+ds/src /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/src /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/src/CMakeFiles/needle_lib.dir/DependInfo.cmake --color= -gmake[5]: Leaving directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' +gmake[5]: Map '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' wordt verlaten /usr/bin/gmake -f src/CMakeFiles/needle_lib.dir/build.make src/CMakeFiles/needle_lib.dir/build -gmake[5]: Entering directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' -gmake[5]: Nothing to be done for 'src/CMakeFiles/needle_lib.dir/build'. -gmake[5]: Leaving directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' +gmake[5]: Map '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' wordt binnengegaan +gmake[5]: Er hoeft niets gedaan te worden voor 'src/CMakeFiles/needle_lib.dir/build'. +gmake[5]: Map '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' wordt verlaten [ 20%] Built target needle_lib /usr/bin/gmake -f src/CMakeFiles/needle.dir/build.make src/CMakeFiles/needle.dir/depend -gmake[5]: Entering directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' +gmake[5]: Map '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' wordt binnengegaan cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/seqan-needle-1.0.1.0.0.git.3011926+ds /build/seqan-needle-1.0.1.0.0.git.3011926+ds/src /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/src /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/src/CMakeFiles/needle.dir/DependInfo.cmake --color= Dependencies file "src/CMakeFiles/needle.dir/main.cpp.o.d" is newer than depends file "/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/src/CMakeFiles/needle.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target needle -gmake[5]: Leaving directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' +gmake[5]: Map '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' wordt verlaten /usr/bin/gmake -f src/CMakeFiles/needle.dir/build.make src/CMakeFiles/needle.dir/build -gmake[5]: Entering directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' -gmake[5]: Nothing to be done for 'src/CMakeFiles/needle.dir/build'. -gmake[5]: Leaving directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' +gmake[5]: Map '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' wordt binnengegaan +gmake[5]: Er hoeft niets gedaan te worden voor 'src/CMakeFiles/needle.dir/build'. +gmake[5]: Map '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' wordt verlaten [ 23%] Built target needle /usr/bin/gmake -f test/CMakeFiles/datasource--mini_example.fasta.dir/build.make test/CMakeFiles/datasource--mini_example.fasta.dir/depend -gmake[5]: Entering directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' +gmake[5]: Map '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' wordt binnengegaan cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/seqan-needle-1.0.1.0.0.git.3011926+ds /build/seqan-needle-1.0.1.0.0.git.3011926+ds/test /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/CMakeFiles/datasource--mini_example.fasta.dir/DependInfo.cmake --color= -gmake[5]: Leaving directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' +gmake[5]: Map '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' wordt verlaten /usr/bin/gmake -f test/CMakeFiles/datasource--mini_example.fasta.dir/build.make test/CMakeFiles/datasource--mini_example.fasta.dir/build -gmake[5]: Entering directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' +gmake[5]: Map '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' wordt binnengegaan [ 25%] Creating directories for 'datasource--mini_example.fasta' cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test && /usr/bin/cmake -Dcfgdir= -P /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/_datasources/tmp/datasource--mini_example.fasta-mkdirs.cmake cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test && /usr/bin/cmake -E touch /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--mini_example.fasta-stamp/datasource--mini_example.fasta-mkdir @@ -920,40 +938,40 @@ cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test && /usr/bin/cmake -E make_directory /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/CMakeFiles cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test && /usr/bin/cmake -E touch /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/CMakeFiles/datasource--mini_example.fasta-complete cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test && /usr/bin/cmake -E touch /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--mini_example.fasta-stamp/datasource--mini_example.fasta-done -gmake[5]: Leaving directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' +gmake[5]: Map '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' wordt verlaten [ 38%] Built target datasource--mini_example.fasta /usr/bin/gmake -f test/cli/CMakeFiles/count_options_test.dir/build.make test/cli/CMakeFiles/count_options_test.dir/depend -gmake[5]: Entering directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' +gmake[5]: Map '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' wordt binnengegaan cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/seqan-needle-1.0.1.0.0.git.3011926+ds /build/seqan-needle-1.0.1.0.0.git.3011926+ds/test/cli /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/cli /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/cli/CMakeFiles/count_options_test.dir/DependInfo.cmake --color= -gmake[5]: Leaving directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' +gmake[5]: Map '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' wordt verlaten /usr/bin/gmake -f test/cli/CMakeFiles/count_options_test.dir/build.make test/cli/CMakeFiles/count_options_test.dir/build -gmake[5]: Entering directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' +gmake[5]: Map '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' wordt binnengegaan [ 40%] Building CXX object test/cli/CMakeFiles/count_options_test.dir/count_options_test.cpp.o cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/cli && /usr/bin/c++ -DBINDIR=\"/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/bin/\" -DDATADIR=\"/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/data/\" -DDATA_INPUT_DIR=\"/build/seqan-needle-1.0.1.0.0.git.3011926+ds/test/data/\" -DOUTPUTDIR=\"/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/output/\" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -I/build/seqan-needle-1.0.1.0.0.git.3011926+ds/test/cli/SEQAN3_CLONE_DIR-NOTFOUND/test/include -I/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/vendor/googletest/googletest/include -I/build/seqan-needle-1.0.1.0.0.git.3011926+ds/src/../include -I/build/seqan-needle-1.0.1.0.0.git.3011926+ds/lib/robin-hood-hashing/src/include -isystem /usr/include/seqan3/submodules/sdsl-lite/include -g -O2 -ffile-prefix-map=/build/seqan-needle-1.0.1.0.0.git.3011926+ds=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++20 -fopenmp -MD -MT test/cli/CMakeFiles/count_options_test.dir/count_options_test.cpp.o -MF CMakeFiles/count_options_test.dir/count_options_test.cpp.o.d -o CMakeFiles/count_options_test.dir/count_options_test.cpp.o -c /build/seqan-needle-1.0.1.0.0.git.3011926+ds/test/cli/count_options_test.cpp [ 41%] Linking CXX executable count_options_test cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/cli && /usr/bin/cmake -E cmake_link_script CMakeFiles/count_options_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/seqan-needle-1.0.1.0.0.git.3011926+ds=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now CMakeFiles/count_options_test.dir/count_options_test.cpp.o -o count_options_test ../../lib/libneedle_lib.a -lgtest -lgtest_main /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so -lrt /usr/lib/gcc/aarch64-linux-gnu/12/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a -gmake[5]: Leaving directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' +gmake[5]: Map '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' wordt verlaten [ 41%] Built target count_options_test /usr/bin/gmake -f test/cli/CMakeFiles/needle_options_test.dir/build.make test/cli/CMakeFiles/needle_options_test.dir/depend -gmake[5]: Entering directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' +gmake[5]: Map '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' wordt binnengegaan cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/seqan-needle-1.0.1.0.0.git.3011926+ds /build/seqan-needle-1.0.1.0.0.git.3011926+ds/test/cli /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/cli /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/cli/CMakeFiles/needle_options_test.dir/DependInfo.cmake --color= -gmake[5]: Leaving directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' +gmake[5]: Map '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' wordt verlaten /usr/bin/gmake -f test/cli/CMakeFiles/needle_options_test.dir/build.make test/cli/CMakeFiles/needle_options_test.dir/build -gmake[5]: Entering directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' +gmake[5]: Map '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' wordt binnengegaan [ 43%] Building CXX object test/cli/CMakeFiles/needle_options_test.dir/needle_options_test.cpp.o cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/cli && /usr/bin/c++ -DBINDIR=\"/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/bin/\" -DDATADIR=\"/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/data/\" -DDATA_INPUT_DIR=\"/build/seqan-needle-1.0.1.0.0.git.3011926+ds/test/data/\" -DOUTPUTDIR=\"/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/output/\" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -I/build/seqan-needle-1.0.1.0.0.git.3011926+ds/test/cli/SEQAN3_CLONE_DIR-NOTFOUND/test/include -I/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/vendor/googletest/googletest/include -I/build/seqan-needle-1.0.1.0.0.git.3011926+ds/src/../include -I/build/seqan-needle-1.0.1.0.0.git.3011926+ds/lib/robin-hood-hashing/src/include -isystem /usr/include/seqan3/submodules/sdsl-lite/include -g -O2 -ffile-prefix-map=/build/seqan-needle-1.0.1.0.0.git.3011926+ds=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++20 -fopenmp -MD -MT test/cli/CMakeFiles/needle_options_test.dir/needle_options_test.cpp.o -MF CMakeFiles/needle_options_test.dir/needle_options_test.cpp.o.d -o CMakeFiles/needle_options_test.dir/needle_options_test.cpp.o -c /build/seqan-needle-1.0.1.0.0.git.3011926+ds/test/cli/needle_options_test.cpp [ 45%] Linking CXX executable needle_options_test cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/cli && /usr/bin/cmake -E cmake_link_script CMakeFiles/needle_options_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/seqan-needle-1.0.1.0.0.git.3011926+ds=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now CMakeFiles/needle_options_test.dir/needle_options_test.cpp.o -o needle_options_test ../../lib/libneedle_lib.a -lgtest -lgtest_main /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so -lrt /usr/lib/gcc/aarch64-linux-gnu/12/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a -gmake[5]: Leaving directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' +gmake[5]: Map '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' wordt verlaten [ 45%] Built target needle_options_test /usr/bin/gmake -f test/CMakeFiles/datasource--mini_example.minimiser.dir/build.make test/CMakeFiles/datasource--mini_example.minimiser.dir/depend -gmake[5]: Entering directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' +gmake[5]: Map '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' wordt binnengegaan cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/seqan-needle-1.0.1.0.0.git.3011926+ds /build/seqan-needle-1.0.1.0.0.git.3011926+ds/test /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/CMakeFiles/datasource--mini_example.minimiser.dir/DependInfo.cmake --color= -gmake[5]: Leaving directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' +gmake[5]: Map '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' wordt verlaten /usr/bin/gmake -f test/CMakeFiles/datasource--mini_example.minimiser.dir/build.make test/CMakeFiles/datasource--mini_example.minimiser.dir/build -gmake[5]: Entering directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' +gmake[5]: Map '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' wordt binnengegaan [ 46%] Creating directories for 'datasource--mini_example.minimiser' cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test && /usr/bin/cmake -Dcfgdir= -P /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/_datasources/tmp/datasource--mini_example.minimiser-mkdirs.cmake cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test && /usr/bin/cmake -E touch /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--mini_example.minimiser-stamp/datasource--mini_example.minimiser-mkdir @@ -985,14 +1003,14 @@ cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test && /usr/bin/cmake -E make_directory /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/CMakeFiles cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test && /usr/bin/cmake -E touch /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/CMakeFiles/datasource--mini_example.minimiser-complete cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test && /usr/bin/cmake -E touch /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--mini_example.minimiser-stamp/datasource--mini_example.minimiser-done -gmake[5]: Leaving directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' +gmake[5]: Map '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' wordt verlaten [ 60%] Built target datasource--mini_example.minimiser /usr/bin/gmake -f test/CMakeFiles/datasource--exp_01.fasta.dir/build.make test/CMakeFiles/datasource--exp_01.fasta.dir/depend -gmake[5]: Entering directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' +gmake[5]: Map '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' wordt binnengegaan cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/seqan-needle-1.0.1.0.0.git.3011926+ds /build/seqan-needle-1.0.1.0.0.git.3011926+ds/test /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/CMakeFiles/datasource--exp_01.fasta.dir/DependInfo.cmake --color= -gmake[5]: Leaving directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' +gmake[5]: Map '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' wordt verlaten /usr/bin/gmake -f test/CMakeFiles/datasource--exp_01.fasta.dir/build.make test/CMakeFiles/datasource--exp_01.fasta.dir/build -gmake[5]: Entering directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' +gmake[5]: Map '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' wordt binnengegaan [ 61%] Creating directories for 'datasource--exp_01.fasta' cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test && /usr/bin/cmake -Dcfgdir= -P /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/_datasources/tmp/datasource--exp_01.fasta-mkdirs.cmake cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test && /usr/bin/cmake -E touch /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--exp_01.fasta-stamp/datasource--exp_01.fasta-mkdir @@ -1024,40 +1042,40 @@ cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test && /usr/bin/cmake -E make_directory /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/CMakeFiles cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test && /usr/bin/cmake -E touch /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/CMakeFiles/datasource--exp_01.fasta-complete cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test && /usr/bin/cmake -E touch /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--exp_01.fasta-stamp/datasource--exp_01.fasta-done -gmake[5]: Leaving directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' +gmake[5]: Map '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' wordt verlaten [ 75%] Built target datasource--exp_01.fasta /usr/bin/gmake -f test/cli/CMakeFiles/ibf_options_test.dir/build.make test/cli/CMakeFiles/ibf_options_test.dir/depend -gmake[5]: Entering directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' +gmake[5]: Map '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' wordt binnengegaan cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/seqan-needle-1.0.1.0.0.git.3011926+ds /build/seqan-needle-1.0.1.0.0.git.3011926+ds/test/cli /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/cli /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/cli/CMakeFiles/ibf_options_test.dir/DependInfo.cmake --color= -gmake[5]: Leaving directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' +gmake[5]: Map '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' wordt verlaten /usr/bin/gmake -f test/cli/CMakeFiles/ibf_options_test.dir/build.make test/cli/CMakeFiles/ibf_options_test.dir/build -gmake[5]: Entering directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' +gmake[5]: Map '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' wordt binnengegaan [ 76%] Building CXX object test/cli/CMakeFiles/ibf_options_test.dir/ibf_options_test.cpp.o cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/cli && /usr/bin/c++ -DBINDIR=\"/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/bin/\" -DDATADIR=\"/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/data/\" -DDATA_INPUT_DIR=\"/build/seqan-needle-1.0.1.0.0.git.3011926+ds/test/data/\" -DOUTPUTDIR=\"/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/output/\" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -I/build/seqan-needle-1.0.1.0.0.git.3011926+ds/test/cli/SEQAN3_CLONE_DIR-NOTFOUND/test/include -I/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/vendor/googletest/googletest/include -I/build/seqan-needle-1.0.1.0.0.git.3011926+ds/src/../include -I/build/seqan-needle-1.0.1.0.0.git.3011926+ds/lib/robin-hood-hashing/src/include -isystem /usr/include/seqan3/submodules/sdsl-lite/include -g -O2 -ffile-prefix-map=/build/seqan-needle-1.0.1.0.0.git.3011926+ds=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++20 -fopenmp -MD -MT test/cli/CMakeFiles/ibf_options_test.dir/ibf_options_test.cpp.o -MF CMakeFiles/ibf_options_test.dir/ibf_options_test.cpp.o.d -o CMakeFiles/ibf_options_test.dir/ibf_options_test.cpp.o -c /build/seqan-needle-1.0.1.0.0.git.3011926+ds/test/cli/ibf_options_test.cpp [ 78%] Linking CXX executable ibf_options_test cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/cli && /usr/bin/cmake -E cmake_link_script CMakeFiles/ibf_options_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/seqan-needle-1.0.1.0.0.git.3011926+ds=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now CMakeFiles/ibf_options_test.dir/ibf_options_test.cpp.o -o ibf_options_test ../../lib/libneedle_lib.a -lgtest -lgtest_main /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so -lrt /usr/lib/gcc/aarch64-linux-gnu/12/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a -gmake[5]: Leaving directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' +gmake[5]: Map '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' wordt verlaten [ 78%] Built target ibf_options_test /usr/bin/gmake -f test/cli/CMakeFiles/minimiser_options_test.dir/build.make test/cli/CMakeFiles/minimiser_options_test.dir/depend -gmake[5]: Entering directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' +gmake[5]: Map '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' wordt binnengegaan cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/seqan-needle-1.0.1.0.0.git.3011926+ds /build/seqan-needle-1.0.1.0.0.git.3011926+ds/test/cli /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/cli /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/cli/CMakeFiles/minimiser_options_test.dir/DependInfo.cmake --color= -gmake[5]: Leaving directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' +gmake[5]: Map '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' wordt verlaten /usr/bin/gmake -f test/cli/CMakeFiles/minimiser_options_test.dir/build.make test/cli/CMakeFiles/minimiser_options_test.dir/build -gmake[5]: Entering directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' +gmake[5]: Map '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' wordt binnengegaan [ 80%] Building CXX object test/cli/CMakeFiles/minimiser_options_test.dir/minimiser_options_test.cpp.o cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/cli && /usr/bin/c++ -DBINDIR=\"/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/bin/\" -DDATADIR=\"/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/data/\" -DDATA_INPUT_DIR=\"/build/seqan-needle-1.0.1.0.0.git.3011926+ds/test/data/\" -DOUTPUTDIR=\"/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/output/\" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -I/build/seqan-needle-1.0.1.0.0.git.3011926+ds/test/cli/SEQAN3_CLONE_DIR-NOTFOUND/test/include -I/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/vendor/googletest/googletest/include -I/build/seqan-needle-1.0.1.0.0.git.3011926+ds/src/../include -I/build/seqan-needle-1.0.1.0.0.git.3011926+ds/lib/robin-hood-hashing/src/include -isystem /usr/include/seqan3/submodules/sdsl-lite/include -g -O2 -ffile-prefix-map=/build/seqan-needle-1.0.1.0.0.git.3011926+ds=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++20 -fopenmp -MD -MT test/cli/CMakeFiles/minimiser_options_test.dir/minimiser_options_test.cpp.o -MF CMakeFiles/minimiser_options_test.dir/minimiser_options_test.cpp.o.d -o CMakeFiles/minimiser_options_test.dir/minimiser_options_test.cpp.o -c /build/seqan-needle-1.0.1.0.0.git.3011926+ds/test/cli/minimiser_options_test.cpp [ 81%] Linking CXX executable minimiser_options_test cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/cli && /usr/bin/cmake -E cmake_link_script CMakeFiles/minimiser_options_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/seqan-needle-1.0.1.0.0.git.3011926+ds=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now CMakeFiles/minimiser_options_test.dir/minimiser_options_test.cpp.o -o minimiser_options_test ../../lib/libneedle_lib.a -lgtest -lgtest_main /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so -lrt /usr/lib/gcc/aarch64-linux-gnu/12/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a -gmake[5]: Leaving directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' +gmake[5]: Map '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' wordt verlaten [ 81%] Built target minimiser_options_test /usr/bin/gmake -f test/CMakeFiles/datasource--ibf_1.dir/build.make test/CMakeFiles/datasource--ibf_1.dir/depend -gmake[5]: Entering directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' +gmake[5]: Map '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' wordt binnengegaan cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/seqan-needle-1.0.1.0.0.git.3011926+ds /build/seqan-needle-1.0.1.0.0.git.3011926+ds/test /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/CMakeFiles/datasource--ibf_1.dir/DependInfo.cmake --color= -gmake[5]: Leaving directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' +gmake[5]: Map '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' wordt verlaten /usr/bin/gmake -f test/CMakeFiles/datasource--ibf_1.dir/build.make test/CMakeFiles/datasource--ibf_1.dir/build -gmake[5]: Entering directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' +gmake[5]: Map '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' wordt binnengegaan [ 83%] Creating directories for 'datasource--ibf_1' cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test && /usr/bin/cmake -Dcfgdir= -P /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/_datasources/tmp/datasource--ibf_1-mkdirs.cmake cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test && /usr/bin/cmake -E touch /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--ibf_1-stamp/datasource--ibf_1-mkdir @@ -1089,34 +1107,34 @@ cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test && /usr/bin/cmake -E make_directory /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/CMakeFiles cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test && /usr/bin/cmake -E touch /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/CMakeFiles/datasource--ibf_1-complete cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test && /usr/bin/cmake -E touch /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--ibf_1-stamp/datasource--ibf_1-done -gmake[5]: Leaving directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' +gmake[5]: Map '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' wordt verlaten [ 96%] Built target datasource--ibf_1 /usr/bin/gmake -f test/cli/CMakeFiles/estimate_options_test.dir/build.make test/cli/CMakeFiles/estimate_options_test.dir/depend -gmake[5]: Entering directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' +gmake[5]: Map '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' wordt binnengegaan cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/seqan-needle-1.0.1.0.0.git.3011926+ds /build/seqan-needle-1.0.1.0.0.git.3011926+ds/test/cli /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/cli /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/cli/CMakeFiles/estimate_options_test.dir/DependInfo.cmake --color= -gmake[5]: Leaving directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' +gmake[5]: Map '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' wordt verlaten /usr/bin/gmake -f test/cli/CMakeFiles/estimate_options_test.dir/build.make test/cli/CMakeFiles/estimate_options_test.dir/build -gmake[5]: Entering directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' +gmake[5]: Map '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' wordt binnengegaan [ 98%] Building CXX object test/cli/CMakeFiles/estimate_options_test.dir/estimate_options_test.cpp.o cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/cli && /usr/bin/c++ -DBINDIR=\"/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/bin/\" -DDATADIR=\"/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/data/\" -DDATA_INPUT_DIR=\"/build/seqan-needle-1.0.1.0.0.git.3011926+ds/test/data/\" -DOUTPUTDIR=\"/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/output/\" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -I/build/seqan-needle-1.0.1.0.0.git.3011926+ds/test/cli/SEQAN3_CLONE_DIR-NOTFOUND/test/include -I/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/vendor/googletest/googletest/include -I/build/seqan-needle-1.0.1.0.0.git.3011926+ds/src/../include -I/build/seqan-needle-1.0.1.0.0.git.3011926+ds/lib/robin-hood-hashing/src/include -isystem /usr/include/seqan3/submodules/sdsl-lite/include -g -O2 -ffile-prefix-map=/build/seqan-needle-1.0.1.0.0.git.3011926+ds=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++20 -fopenmp -MD -MT test/cli/CMakeFiles/estimate_options_test.dir/estimate_options_test.cpp.o -MF CMakeFiles/estimate_options_test.dir/estimate_options_test.cpp.o.d -o CMakeFiles/estimate_options_test.dir/estimate_options_test.cpp.o -c /build/seqan-needle-1.0.1.0.0.git.3011926+ds/test/cli/estimate_options_test.cpp [100%] Linking CXX executable estimate_options_test cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/cli && /usr/bin/cmake -E cmake_link_script CMakeFiles/estimate_options_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/seqan-needle-1.0.1.0.0.git.3011926+ds=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now CMakeFiles/estimate_options_test.dir/estimate_options_test.cpp.o -o estimate_options_test ../../lib/libneedle_lib.a -lgtest -lgtest_main /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so -lrt /usr/lib/gcc/aarch64-linux-gnu/12/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a -gmake[5]: Leaving directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' +gmake[5]: Map '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' wordt verlaten [100%] Built target estimate_options_test /usr/bin/gmake -f test/CMakeFiles/cli_test.dir/build.make test/CMakeFiles/cli_test.dir/depend -gmake[5]: Entering directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' +gmake[5]: Map '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' wordt binnengegaan cd /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/seqan-needle-1.0.1.0.0.git.3011926+ds /build/seqan-needle-1.0.1.0.0.git.3011926+ds/test /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/CMakeFiles/cli_test.dir/DependInfo.cmake --color= -gmake[5]: Leaving directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' +gmake[5]: Map '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' wordt verlaten /usr/bin/gmake -f test/CMakeFiles/cli_test.dir/build.make test/CMakeFiles/cli_test.dir/build -gmake[5]: Entering directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' -gmake[5]: Nothing to be done for 'test/CMakeFiles/cli_test.dir/build'. -gmake[5]: Leaving directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' +gmake[5]: Map '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' wordt binnengegaan +gmake[5]: Er hoeft niets gedaan te worden voor 'test/CMakeFiles/cli_test.dir/build'. +gmake[5]: Map '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' wordt verlaten [100%] Built target cli_test -gmake[4]: Leaving directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' +gmake[4]: Map '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' wordt verlaten /usr/bin/cmake -E cmake_progress_start /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/CMakeFiles 0 -gmake[3]: Leaving directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' -gmake[2]: Leaving directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test' +gmake[3]: Map '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' wordt verlaten +gmake[2]: Map '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test' wordt verlaten Done constructing a list of tests Updating test list for fixtures Added 0 tests to meet fixture requirements @@ -1175,7 +1193,7 @@ 1: [----------] Global test environment set-up. 1: [----------] 3 tests from count 1: [ RUN ] count.small_example -1: [ OK ] count.small_example (2 ms) +1: [ OK ] count.small_example (1 ms) 1: [ RUN ] count.small_example_paired 1: [ OK ] count.small_example_paired (1 ms) 1: [ RUN ] count.small_example_exclude @@ -1190,17 +1208,17 @@ 2: [----------] Global test environment set-up. 2: [----------] 10 tests from estimate 2: [ RUN ] estimate.small_example -2: [ OK ] estimate.small_example (10 ms) +2: [ OK ] estimate.small_example (2 ms) 2: [ RUN ] estimate.small_example_uncompressed -2: [ OK ] estimate.small_example_uncompressed (1 ms) +2: [ OK ] estimate.small_example_uncompressed (0 ms) 2: [ RUN ] estimate.small_example_gene_not_found 2: [ OK ] estimate.small_example_gene_not_found (1 ms) 2: [ RUN ] estimate.small_example_different_expressions_per_level -2: [ OK ] estimate.small_example_different_expressions_per_level (1 ms) +2: [ OK ] estimate.small_example_different_expressions_per_level (0 ms) 2: [ RUN ] estimate.small_example_different_expressions_per_level_normalization_1 2: [ OK ] estimate.small_example_different_expressions_per_level_normalization_1 (1 ms) 2: [ RUN ] estimate.small_example_different_expressions_per_level_normalization_1_uncompressed -2: [ OK ] estimate.small_example_different_expressions_per_level_normalization_1_uncompressed (1 ms) +2: [ OK ] estimate.small_example_different_expressions_per_level_normalization_1_uncompressed (0 ms) 2: [ RUN ] estimate.example 3: Running main() from ./googletest/src/gtest_main.cc 3: [==========] Running 8 tests from 1 test suite. @@ -1209,7 +1227,7 @@ 3: [ RUN ] ibf.given_expression_thresholds 3: [ OK ] ibf.given_expression_thresholds (1 ms) 3: [ RUN ] ibf.given_expression_thresholds_include_file -3: [ OK ] ibf.given_expression_thresholds_include_file (1 ms) +3: [ OK ] ibf.given_expression_thresholds_include_file (0 ms) 3: [ RUN ] ibf.given_expression_thresholds_exclude_file 3: [ OK ] ibf.given_expression_thresholds_exclude_file (0 ms) 3: [ RUN ] ibf.no_given_expression_thresholds @@ -1226,42 +1244,42 @@ 4: [----------] Global test environment set-up. 4: [----------] 4 tests from ibfmin 4: [ RUN ] ibfmin.given_expression_thresholds -4: [ OK ] ibfmin.given_expression_thresholds (1 ms) +4: [ OK ] ibfmin.given_expression_thresholds (0 ms) 4: [ RUN ] ibfmin.no_given_expression_thresholds 4: [ OK ] ibfmin.no_given_expression_thresholds (0 ms) 4: [ RUN ] ibfmin.expression_thresholds_by_genome -4: [ OK ] ibfmin.expression_thresholds_by_genome (5 ms) +4: [ OK ] ibfmin.expression_thresholds_by_genome (2 ms) 4: [ RUN ] ibfmin.different_shape 4: [ OK ] ibfmin.different_shape (1 ms) -4: [----------] 4 tests from ibfmin (9 ms total) +4: [----------] 4 tests from ibfmin (4 ms total) 4: 4: [----------] Global test environment tear-down -4: [==========] 4 tests from 1 test suite ran. (9 ms total) +4: [==========] 4 tests from 1 test suite ran. (5 ms total) 4: [ PASSED ] 4 tests. 5: Running main() from ./googletest/src/gtest_main.cc 5: [==========] Running 8 tests from 1 test suite. 5: [----------] Global test environment set-up. 5: [----------] 8 tests from minimiser 5: [ RUN ] minimiser.small_example -5: [ OK ] minimiser.small_example (2 ms) +5: [ OK ] minimiser.small_example (4 ms) 5: [ RUN ] minimiser.small_example_different_shape 5: [ OK ] minimiser.small_example_different_shape (0 ms) 5: [ RUN ] minimiser.small_example_samplewise -5: [ OK ] minimiser.small_example_samplewise (1 ms) +5: [ OK ] minimiser.small_example_samplewise (0 ms) 5: [ RUN ] minimiser.cutoff_by_filesize 5: [ OK ] minimiser.cutoff_by_filesize (0 ms) 5: [ RUN ] minimiser.small_example_two_threads -5: [ OK ] minimiser.small_example_two_threads (5 ms) +5: [ OK ] minimiser.small_example_two_threads (3 ms) 5: [ RUN ] minimiser.small_example_include 5: [ OK ] minimiser.small_example_include (0 ms) 5: [ RUN ] minimiser.small_example_exclude 5: [ OK ] minimiser.small_example_exclude (1 ms) 5: [ RUN ] minimiser.small_example_shape 5: [ OK ] minimiser.small_example_shape (0 ms) -5: [----------] 8 tests from minimiser (13 ms total) +5: [----------] 8 tests from minimiser (12 ms total) 5: 5: [----------] Global test environment tear-down -5: [==========] 8 tests from 1 test suite ran. (13 ms total) +5: [==========] 8 tests from 1 test suite ran. (12 ms total) 5: [ PASSED ] 8 tests. 6: Running main() from ./googletest/src/gtest_main.cc 6: [==========] Running 2 tests from 1 test suite. @@ -1273,181 +1291,181 @@ 7: [----------] Global test environment set-up. 7: [----------] 19 tests from ibf_options_test 7: [ RUN ] ibf_options_test.ibf_no_options - 1/10 Test #1: test/api/count_test ............... Passed 0.09 sec +8: Running main() from ./googletest/src/gtest_main.cc +8: [==========] Running 8 tests from 1 test suite. +8: [----------] Global test environment set-up. +8: [----------] 8 tests from minimiser_options_test +8: [ RUN ] minimiser_options_test.no_options + 1/10 Test #1: test/api/count_test ............... Passed 0.04 sec test 9 Start 9: test/cli/estimate_options_test 9: Test command: /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/cli/estimate_options_test 9: Working Directory: /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/cli 9: Test timeout computed to be: 10000000 - 2/10 Test #4: test/api/ibfmin_test .............. Passed 0.08 sec + 2/10 Test #4: test/api/ibfmin_test .............. Passed 0.04 sec test 10 Start 10: test/cli/count_options_test 10: Test command: /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/cli/count_options_test 10: Working Directory: /build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu/test/cli 10: Test timeout computed to be: 10000000 - 3/10 Test #5: test/api/minimiser_test ........... Passed 0.08 sec -6: [ OK ] needle_options_test.no_options (33 ms) + 3/10 Test #5: test/api/minimiser_test ........... Passed 0.04 sec +6: [ OK ] needle_options_test.no_options (14 ms) 6: [ RUN ] needle_options_test.fail_no_argument -7: [ OK ] ibf_options_test.ibf_no_options (43 ms) -7: [ RUN ] ibf_options_test.ibf_fail_no_argument -8: Running main() from ./googletest/src/gtest_main.cc -8: [==========] Running 8 tests from 1 test suite. -8: [----------] Global test environment set-up. -8: [----------] 8 tests from minimiser_options_test -8: [ RUN ] minimiser_options_test.no_options -9: Running main() from ./googletest/src/gtest_main.cc -9: [==========] Running 5 tests from 1 test suite. -9: [----------] Global test environment set-up. -9: [----------] 5 tests from estimate_options_test -9: [ RUN ] estimate_options_test.no_options 10: Running main() from ./googletest/src/gtest_main.cc 10: [==========] Running 5 tests from 1 test suite. 10: [----------] Global test environment set-up. 10: [----------] 5 tests from count_options_test 10: [ RUN ] count_options_test.no_options -8: [ OK ] minimiser_options_test.no_options (37 ms) -8: [ RUN ] minimiser_options_test.fail_no_argument -6: [ OK ] needle_options_test.fail_no_argument (28 ms) -6: [----------] 2 tests from needle_options_test (61 ms total) +9: Running main() from ./googletest/src/gtest_main.cc +9: [==========] Running 5 tests from 1 test suite. +9: [----------] Global test environment set-up. +9: [----------] 5 tests from estimate_options_test +9: [ RUN ] estimate_options_test.no_options +7: [ OK ] ibf_options_test.ibf_no_options (31 ms) +7: [ RUN ] ibf_options_test.ibf_fail_no_argument +10: [ OK ] count_options_test.no_options (14 ms) +10: [ RUN ] count_options_test.fail_no_argument +6: [ OK ] needle_options_test.fail_no_argument (22 ms) +6: [----------] 2 tests from needle_options_test (37 ms total) 6: 6: [----------] Global test environment tear-down -6: [==========] 2 tests from 1 test suite ran. (61 ms total) +6: [==========] 2 tests from 1 test suite ran. (37 ms total) 6: [ PASSED ] 2 tests. - 4/10 Test #6: test/cli/needle_options_test ...... Passed 0.08 sec -9: [ OK ] estimate_options_test.no_options (32 ms) +8: [ OK ] minimiser_options_test.no_options (27 ms) + 4/10 Test #6: test/cli/needle_options_test ...... Passed 0.05 sec +8: [ RUN ] minimiser_options_test.fail_no_argument +9: [ OK ] estimate_options_test.no_options (16 ms) 9: [ RUN ] estimate_options_test.fail_no_argument -8: [ OK ] minimiser_options_test.fail_no_argument (31 ms) +8: [ OK ] minimiser_options_test.fail_no_argument (16 ms) 8: [ RUN ] minimiser_options_test.with_arguments -7: [ OK ] ibf_options_test.ibf_fail_no_argument (43 ms) +7: [ OK ] ibf_options_test.ibf_fail_no_argument (17 ms) 7: [ RUN ] ibf_options_test.ibf_fail_contradiction -7: [ OK ] ibf_options_test.ibf_fail_contradiction (24 ms) -7: [ RUN ] ibf_options_test.ibf_fail_contradiction2 -9: [ OK ] estimate_options_test.fail_no_argument (47 ms) +10: [ OK ] count_options_test.fail_no_argument (17 ms) +10: [ RUN ] count_options_test.with_arguments +9: [ OK ] estimate_options_test.fail_no_argument (13 ms) 9: [ RUN ] estimate_options_test.with_argument -8: [ OK ] minimiser_options_test.with_arguments (39 ms) +10: [ OK ] count_options_test.with_arguments (14 ms) +10: [ RUN ] count_options_test.multithreads +8: [ OK ] minimiser_options_test.with_arguments (18 ms) 8: [ RUN ] minimiser_options_test.cutoff -10: [ OK ] count_options_test.no_options (88 ms) -10: [ RUN ] count_options_test.fail_no_argument -7: [ OK ] ibf_options_test.ibf_fail_contradiction2 (23 ms) -7: [ RUN ] ibf_options_test.ibf_fail_no_fpr -8: [ OK ] minimiser_options_test.cutoff (39 ms) +7: [ OK ] ibf_options_test.ibf_fail_contradiction (18 ms) +7: [ RUN ] ibf_options_test.ibf_fail_contradiction2 +8: [ OK ] minimiser_options_test.cutoff (13 ms) 8: [ RUN ] minimiser_options_test.multiple_sample -7: [ OK ] ibf_options_test.ibf_fail_no_fpr (36 ms) +7: [ OK ] ibf_options_test.ibf_fail_contradiction2 (18 ms) +7: [ RUN ] ibf_options_test.ibf_fail_no_fpr +7: [ OK ] ibf_options_test.ibf_fail_no_fpr (14 ms) 7: [ RUN ] ibf_options_test.ibf_fail_incorrect_number_of_fprs -10: [ OK ] count_options_test.fail_no_argument (40 ms) -10: [ RUN ] count_options_test.with_arguments -8: [ OK ] minimiser_options_test.multiple_sample (27 ms) -8: [ RUN ] minimiser_options_test.multithreads -10: [ OK ] count_options_test.with_arguments (42 ms) -10: [ RUN ] count_options_test.multithreads -7: [ OK ] ibf_options_test.ibf_fail_incorrect_number_of_fprs (52 ms) -7: [ RUN ] ibf_options_test.ibf_with_argument -8: [ OK ] minimiser_options_test.multithreads (52 ms) -8: [ RUN ] minimiser_options_test.paired -10: [ OK ] count_options_test.multithreads (39 ms) +10: [ OK ] count_options_test.multithreads (36 ms) 10: [ RUN ] count_options_test.paired -8: [ OK ] minimiser_options_test.paired (31 ms) -8: [ RUN ] minimiser_options_test.invalid_argument -10: [ OK ] count_options_test.paired (32 ms) -10: [----------] 5 tests from count_options_test (244 ms total) +8: [ OK ] minimiser_options_test.multiple_sample (23 ms) +8: [ RUN ] minimiser_options_test.multithreads +10: [ OK ] count_options_test.paired (24 ms) +10: [----------] 5 tests from count_options_test (108 ms total) 10: 10: [----------] Global test environment tear-down -10: [==========] 5 tests from 1 test suite ran. (245 ms total) +10: [==========] 5 tests from 1 test suite ran. (108 ms total) 10: [ PASSED ] 5 tests. - 5/10 Test #10: test/cli/count_options_test ....... Passed 0.26 sec -8: [ OK ] minimiser_options_test.invalid_argument (40 ms) -8: [----------] 8 tests from minimiser_options_test (302 ms total) + 5/10 Test #10: test/cli/count_options_test ....... Passed 0.12 sec +7: [ OK ] ibf_options_test.ibf_fail_incorrect_number_of_fprs (26 ms) +7: [ RUN ] ibf_options_test.ibf_with_argument +8: [ OK ] minimiser_options_test.multithreads (28 ms) +8: [ RUN ] minimiser_options_test.paired +8: [ OK ] minimiser_options_test.paired (29 ms) +8: [ RUN ] minimiser_options_test.invalid_argument +8: [ OK ] minimiser_options_test.invalid_argument (16 ms) +8: [----------] 8 tests from minimiser_options_test (174 ms total) 8: 8: [----------] Global test environment tear-down -8: [==========] 8 tests from 1 test suite ran. (302 ms total) +8: [==========] 8 tests from 1 test suite ran. (174 ms total) 8: [ PASSED ] 8 tests. - 6/10 Test #8: test/cli/minimiser_options_test ... Passed 0.32 sec -3: [ OK ] ibf.different_file_sizes (7830 ms) -3: [----------] 8 tests from ibf (7836 ms total) + 6/10 Test #8: test/cli/minimiser_options_test ... Passed 0.18 sec +3: [ OK ] ibf.different_file_sizes (4930 ms) +3: [----------] 8 tests from ibf (4935 ms total) 3: 3: [----------] Global test environment tear-down -3: [==========] 8 tests from 1 test suite ran. (7836 ms total) +3: [==========] 8 tests from 1 test suite ran. (4935 ms total) 3: [ PASSED ] 8 tests. - 7/10 Test #3: test/api/ibf_test ................. Passed 7.86 sec -7: [ OK ] ibf_options_test.ibf_with_argument (8975 ms) + 7/10 Test #3: test/api/ibf_test ................. Passed 4.94 sec +7: [ OK ] ibf_options_test.ibf_with_argument (5673 ms) 7: [ RUN ] ibf_options_test.ibf_with_argument_with_options -2: [ OK ] estimate.example (10978 ms) +2: [ OK ] estimate.example (7450 ms) 2: [ RUN ] estimate.example_multiple_threads -9: [ OK ] estimate_options_test.with_argument (12323 ms) +9: [ OK ] estimate_options_test.with_argument (8276 ms) 9: [ RUN ] estimate_options_test.with_argument_normalization_method -7: [ OK ] ibf_options_test.ibf_with_argument_with_options (6337 ms) +7: [ OK ] ibf_options_test.ibf_with_argument_with_options (5721 ms) 7: [ RUN ] ibf_options_test.ibf_with_argument_with_userdefined_shape -2: [ OK ] estimate.example_multiple_threads (8738 ms) +2: [ OK ] estimate.example_multiple_threads (7446 ms) 2: [ RUN ] estimate.example_different_expressions_per_level -9: [ OK ] estimate_options_test.with_argument_normalization_method (9455 ms) +9: [ OK ] estimate_options_test.with_argument_normalization_method (8248 ms) 9: [ RUN ] estimate_options_test.with_argument_out -7: [ OK ] ibf_options_test.ibf_with_argument_with_userdefined_shape (7378 ms) +7: [ OK ] ibf_options_test.ibf_with_argument_with_userdefined_shape (6003 ms) 7: [ RUN ] ibf_options_test.ibfmin_no_options -7: [ OK ] ibf_options_test.ibfmin_no_options (12 ms) +7: [ OK ] ibf_options_test.ibfmin_no_options (8 ms) 7: [ RUN ] ibf_options_test.ibfmin_fail_no_argument -7: [ OK ] ibf_options_test.ibfmin_fail_no_argument (19 ms) +7: [ OK ] ibf_options_test.ibfmin_fail_no_argument (8 ms) 7: [ RUN ] ibf_options_test.ibfmin_fail_contradiction -7: [ OK ] ibf_options_test.ibfmin_fail_contradiction (15 ms) +7: [ OK ] ibf_options_test.ibfmin_fail_contradiction (8 ms) 7: [ RUN ] ibf_options_test.ibfmin_fail_contradiction2 -7: [ OK ] ibf_options_test.ibfmin_fail_contradiction2 (15 ms) +7: [ OK ] ibf_options_test.ibfmin_fail_contradiction2 (8 ms) 7: [ RUN ] ibf_options_test.ibfmin_fail_no_fpr -7: [ OK ] ibf_options_test.ibfmin_fail_no_fpr (15 ms) +7: [ OK ] ibf_options_test.ibfmin_fail_no_fpr (8 ms) 7: [ RUN ] ibf_options_test.ibfmin_fail_incorrect_number_of_fprs -7: [ OK ] ibf_options_test.ibfmin_fail_incorrect_number_of_fprs (16 ms) +7: [ OK ] ibf_options_test.ibfmin_fail_incorrect_number_of_fprs (8 ms) 7: [ RUN ] ibf_options_test.ibfmin_with_argument -7: [ OK ] ibf_options_test.ibfmin_with_argument (15 ms) +7: [ OK ] ibf_options_test.ibfmin_with_argument (8 ms) 7: [ RUN ] ibf_options_test.compressed -7: [ OK ] ibf_options_test.compressed (15 ms) +7: [ OK ] ibf_options_test.compressed (8 ms) 7: [ RUN ] ibf_options_test.more_hash_functions -7: [ OK ] ibf_options_test.more_hash_functions (16 ms) +7: [ OK ] ibf_options_test.more_hash_functions (8 ms) 7: [ RUN ] ibf_options_test.expression_thresholds -7: [ OK ] ibf_options_test.expression_thresholds (23 ms) -7: [----------] 19 tests from ibf_options_test (23083 ms total) +7: [ OK ] ibf_options_test.expression_thresholds (8 ms) +7: [----------] 19 tests from ibf_options_test (17610 ms total) 7: 7: [----------] Global test environment tear-down -7: [==========] 19 tests from 1 test suite ran. (23083 ms total) +7: [==========] 19 tests from 1 test suite ran. (17610 ms total) 7: [ PASSED ] 19 tests. - 8/10 Test #7: test/cli/ibf_options_test ......... Passed 23.09 sec -2: [ OK ] estimate.example_different_expressions_per_level (4186 ms) + 8/10 Test #7: test/cli/ibf_options_test ......... Passed 17.62 sec +2: [ OK ] estimate.example_different_expressions_per_level (3539 ms) 2: [ RUN ] estimate.example_different_expressions_per_level_multiple_threads -2: [ OK ] estimate.example_different_expressions_per_level_multiple_threads (3608 ms) -2: [----------] 10 tests from estimate (27529 ms total) +2: [ OK ] estimate.example_different_expressions_per_level_multiple_threads (3503 ms) +2: [----------] 10 tests from estimate (21948 ms total) 2: 2: [----------] Global test environment tear-down -2: [==========] 10 tests from 1 test suite ran. (27529 ms total) +2: [==========] 10 tests from 1 test suite ran. (21948 ms total) 2: [ PASSED ] 10 tests. - 9/10 Test #2: test/api/estimate_test ............ Passed 27.54 sec -9: [ OK ] estimate_options_test.with_argument_out (8500 ms) -9: [----------] 5 tests from estimate_options_test (30359 ms total) + 9/10 Test #2: test/api/estimate_test ............ Passed 21.96 sec +9: [ OK ] estimate_options_test.with_argument_out (7537 ms) +9: [----------] 5 tests from estimate_options_test (24092 ms total) 9: 9: [----------] Global test environment tear-down -9: [==========] 5 tests from 1 test suite ran. (30359 ms total) +9: [==========] 5 tests from 1 test suite ran. (24092 ms total) 9: [ PASSED ] 5 tests. -10/10 Test #9: test/cli/estimate_options_test .... Passed 30.38 sec +10/10 Test #9: test/cli/estimate_options_test .... Passed 24.11 sec 100% tests passed, 0 tests failed out of 10 -Total Test time (real) = 476.76 sec -make[1]: Leaving directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' +Total Test time (real) = 372.04 sec +make[1]: Map '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' wordt verlaten create-stamp debian/debhelper-build-stamp dh_prep dh_auto_install cd obj-aarch64-linux-gnu && make -j8 install DESTDIR=/build/seqan-needle-1.0.1.0.0.git.3011926\+ds/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" -make[1]: Entering directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' +make[1]: Map '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' wordt binnengegaan /usr/bin/cmake -S/build/seqan-needle-1.0.1.0.0.git.3011926+ds -B/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 preinstall -make[2]: Entering directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' -make[2]: Nothing to be done for 'preinstall'. -make[2]: Leaving directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' +make[2]: Map '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' wordt binnengegaan +make[2]: Er hoeft niets gedaan te worden voor 'preinstall'. +make[2]: Map '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' wordt verlaten Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "None" -- Installing: /build/seqan-needle-1.0.1.0.0.git.3011926+ds/debian/tmp/usr/include/robin_hood.h -- Installing: /build/seqan-needle-1.0.1.0.0.git.3011926+ds/debian/tmp/usr/lib/aarch64-linux-gnu/cmake/robin_hood/robin_hoodConfig.cmake -- Installing: /build/seqan-needle-1.0.1.0.0.git.3011926+ds/debian/tmp/usr/lib/aarch64-linux-gnu/cmake/robin_hood/robin_hood-targets.cmake -make[1]: Leaving directory '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' +make[1]: Map '/build/seqan-needle-1.0.1.0.0.git.3011926+ds/obj-aarch64-linux-gnu' wordt verlaten dh_install dh_installdocs dh_installchangelogs @@ -1466,9 +1484,9 @@ dh_gencontrol dh_md5sums dh_builddeb -dpkg-deb: building package 'seqan-needle-doc' in '../seqan-needle-doc_1.0.1.0.0.git.3011926+ds-4_all.deb'. -dpkg-deb: building package 'seqan-needle' in '../seqan-needle_1.0.1.0.0.git.3011926+ds-4_arm64.deb'. -dpkg-deb: building package 'seqan-needle-dbgsym' in '../seqan-needle-dbgsym_1.0.1.0.0.git.3011926+ds-4_arm64.deb'. +dpkg-deb: pakket 'seqan-needle-dbgsym' wordt gebouwd in '../seqan-needle-dbgsym_1.0.1.0.0.git.3011926+ds-4_arm64.deb'. +dpkg-deb: pakket 'seqan-needle' wordt gebouwd in '../seqan-needle_1.0.1.0.0.git.3011926+ds-4_arm64.deb'. +dpkg-deb: pakket 'seqan-needle-doc' wordt gebouwd in '../seqan-needle-doc_1.0.1.0.0.git.3011926+ds-4_all.deb'. dpkg-genbuildinfo --build=binary -O../seqan-needle_1.0.1.0.0.git.3011926+ds-4_arm64.buildinfo dpkg-genchanges --build=binary -O../seqan-needle_1.0.1.0.0.git.3011926+ds-4_arm64.changes dpkg-genchanges: info: binary-only upload (no source code included) @@ -1476,12 +1494,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/28599/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/28599/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/31443 and its subdirectories -I: Current time: Sat Apr 8 00:51:51 -12 2023 -I: pbuilder-time-stamp: 1680958311 +I: removing directory /srv/workspace/pbuilder/28599 and its subdirectories +I: Current time: Sat May 11 09:26:10 +14 2024 +I: pbuilder-time-stamp: 1715369170