Diff of the two buildlogs: -- --- b1/build.log 2024-01-07 17:01:29.718850641 +0000 +++ b2/build.log 2024-01-07 17:09:39.242806650 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Sun Jan 7 04:58:38 -12 2024 -I: pbuilder-time-stamp: 1704646718 +I: Current time: Mon Jan 8 07:01:34 +14 2024 +I: pbuilder-time-stamp: 1704646894 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bookworm-reproducible-base.tgz] I: copying local configuration @@ -27,49 +27,81 @@ dpkg-source: info: applying spelling-errors.patch I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/3286079/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/1458228/tmp/hooks/D01_modify_environment starting +debug: Running on codethink02-arm64. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Jan 7 17:02 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/1458228/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/1458228/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='arm64' - DEBIAN_FRONTEND='noninteractive' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="2" [2]="15" [3]="1" [4]="release" [5]="aarch64-unknown-linux-gnu") + BASH_VERSION='5.2.15(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=arm64 + DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=12 ' - DISTRIBUTION='bookworm' - HOME='/root' - HOST_ARCH='arm64' + DIRSTACK=() + DISTRIBUTION=bookworm + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=aarch64 + HOST_ARCH=arm64 IFS=' ' - INVOCATION_ID='aa1fd8c3896f42bbbe66941662ae234e' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='3286079' - PS1='# ' - PS2='> ' + INVOCATION_ID=a09e1ac265404242b6a2c074d05e0a77 + LANG=C + LANGUAGE=nl_BE:nl + LC_ALL=C + MACHTYPE=aarch64-unknown-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=1458228 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.ycpI9kIT/pbuilderrc_ulIF --distribution bookworm --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bookworm-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.ycpI9kIT/b1 --logfile b1/build.log nco_5.1.4-1+deb12u1.dsc' - SUDO_GID='109' - SUDO_UID='104' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://192.168.101.104:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.ycpI9kIT/pbuilderrc_wAPU --distribution bookworm --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bookworm-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.ycpI9kIT/b2 --logfile b2/build.log nco_5.1.4-1+deb12u1.dsc' + SUDO_GID=109 + SUDO_UID=104 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://192.168.101.104:3128 I: uname -a - Linux codethink04-arm64 6.1.0-17-cloud-arm64 #1 SMP Debian 6.1.69-1 (2023-12-30) aarch64 GNU/Linux + Linux i-capture-the-hostname 6.1.0-17-cloud-arm64 #1 SMP Debian 6.1.69-1 (2023-12-30) aarch64 GNU/Linux I: ls -l /bin total 7104 -rwxr-xr-x 1 root root 1346480 Apr 23 2023 bash @@ -129,7 +161,7 @@ -rwxr-xr-x 1 root root 68480 Sep 20 2022 rmdir -rwxr-xr-x 1 root root 68392 Jul 28 23:46 run-parts -rwxr-xr-x 1 root root 134536 Jan 5 2023 sed - lrwxrwxrwx 1 root root 4 Jan 5 2023 sh -> dash + lrwxrwxrwx 1 root root 9 Jan 7 17:02 sh -> /bin/bash -rwxr-xr-x 1 root root 68432 Sep 20 2022 sleep -rwxr-xr-x 1 root root 134088 Sep 20 2022 stty -rwsr-xr-x 1 root root 133312 Mar 23 2023 su @@ -155,7 +187,7 @@ -rwxr-xr-x 1 root root 2206 Apr 10 2022 zless -rwxr-xr-x 1 root root 1842 Apr 10 2022 zmore -rwxr-xr-x 1 root root 4577 Apr 10 2022 znew -I: user script /srv/workspace/pbuilder/3286079/tmp/hooks/D02_print_environment finished +I: user script /srv/workspace/pbuilder/1458228/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -332,7 +364,7 @@ Get: 117 http://deb.debian.org/debian bookworm/main arm64 netcdf-bin arm64 1:4.9.0-3+b1 [255 kB] Get: 118 http://deb.debian.org/debian bookworm/main arm64 tex-common all 6.18 [32.5 kB] Get: 119 http://deb.debian.org/debian bookworm/main arm64 texinfo arm64 6.8-6+b1 [1808 kB] -Fetched 102 MB in 1s (88.7 MB/s) +Fetched 102 MB in 1s (74.4 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package m4. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 18171 files and directories currently installed.) @@ -993,7 +1025,11 @@ Building tag database... -> Finished parsing the build-deps I: Building the package -I: Running cd /build/reproducible-path/nco-5.1.4/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../nco_5.1.4-1+deb12u1_source.changes +I: user script /srv/workspace/pbuilder/1458228/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for bookworm +I: user script /srv/workspace/pbuilder/1458228/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/nco-5.1.4/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../nco_5.1.4-1+deb12u1_source.changes dpkg-buildpackage: info: source package nco dpkg-buildpackage: info: source version 5.1.4-1+deb12u1 dpkg-buildpackage: info: source distribution bookworm @@ -1344,7 +1380,7 @@ HAVE_NETCDF4_H....... yes HDF5_PLUGIN_PATH..... . HOST................. -HOSTNAME............. codethink04-arm64 +HOSTNAME............. i-capture-the-hostname LDFLAGS.............. -L/usr/lib/aarch64-linux-gnu -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lnetcdf -Wl,-z,relro -Wl,-z,now LIBS................. -ludunits2 -lgsl -lnetcdf -lnetcdf -lnetcdf -lcurl -L/usr/lib/aarch64-linux-gnu -lgsl -lgslcblas -lm NETCDF_ROOT.......... /usr @@ -1371,9 +1407,9 @@ /usr/bin/ncgen -o big.nc big.cdl /usr/bin/ncgen -o in_rec_zero.nc in_rec_zero.cdl /build/reproducible-path/nco-5.1.4/src/nco/ncks -O -7 --cnk_dmn time,10 in.nc in_4c.nc -/usr/bin/ncgen -k netCDF-4 -o in_4.nc in.cdl -/bin/bash: line 1: /build/reproducible-path/nco-5.1.4/src/nco/ncks: No such file or directory +make[4]: /build/reproducible-path/nco-5.1.4/src/nco/ncks: No such file or directory make[4]: [Makefile:586: in_4c.nc] Error 127 (ignored) +/usr/bin/ncgen -k netCDF-4 -o in_4.nc in.cdl /usr/bin/ncgen -k netCDF-4 -o in_grp_8.nc in_grp_8.cdl /usr/bin/ncgen -k netCDF-4 -o hdn.nc hdn.cdl /usr/bin/ncgen -k netCDF-4 -o mrd.nc mrd.cdl @@ -1392,52 +1428,43 @@ Making all in nco make[5]: Entering directory '/build/reproducible-path/nco-5.1.4/src/nco' gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -g -O2 -ffile-prefix-map=/build/reproducible-path/nco-5.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=gnu11 -c -o ncatted.o ncatted.c -/bin/bash ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -g -O2 -ffile-prefix-map=/build/reproducible-path/nco-5.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=gnu11 -c -o nco_att_utl.lo nco_att_utl.c -/bin/bash ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -g -O2 -ffile-prefix-map=/build/reproducible-path/nco-5.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=gnu11 -c -o nco_aux.lo nco_aux.c -/bin/bash ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -g -O2 -ffile-prefix-map=/build/reproducible-path/nco-5.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=gnu11 -c -o nco_bnr.lo nco_bnr.c -/bin/bash ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -g -O2 -ffile-prefix-map=/build/reproducible-path/nco-5.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=gnu11 -c -o nco_cln_utl.lo nco_cln_utl.c -/bin/bash ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial 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-/bin/bash ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -g -O2 -ffile-prefix-map=/build/reproducible-path/nco-5.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=gnu11 -c -o nco_ctl.lo nco_ctl.c +/bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -g -O2 -ffile-prefix-map=/build/reproducible-path/nco-5.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=gnu11 -c -o nco_att_utl.lo nco_att_utl.c +/bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -g -O2 -ffile-prefix-map=/build/reproducible-path/nco-5.1.4=. -fstack-protector-strong -Wformat -Werror=format-security 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-ffile-prefix-map=/build/reproducible-path/nco-5.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=gnu11 -c -o nco_cnv_arm.lo nco_cnv_arm.c +/bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -g -O2 -ffile-prefix-map=/build/reproducible-path/nco-5.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=gnu11 -c -o nco_cnv_csm.lo nco_cnv_csm.c +/bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -g -O2 -ffile-prefix-map=/build/reproducible-path/nco-5.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=gnu11 -c -o nco_crt.lo nco_crt.c +/bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -g -O2 -ffile-prefix-map=/build/reproducible-path/nco-5.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=gnu11 -c -o nco_ctl.lo nco_ctl.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -g -O2 -ffile-prefix-map=/build/reproducible-path/nco-5.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=gnu11 -c nco_bnr.c -fPIC -DPIC -o .libs/nco_bnr.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -g -O2 -ffile-prefix-map=/build/reproducible-path/nco-5.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=gnu11 -c nco_cln_utl.c -fPIC -DPIC -o .libs/nco_cln_utl.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -g -O2 -ffile-prefix-map=/build/reproducible-path/nco-5.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=gnu11 -c nco_att_utl.c -fPIC -DPIC -o .libs/nco_att_utl.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -g -O2 -ffile-prefix-map=/build/reproducible-path/nco-5.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=gnu11 -c nco_cnv_arm.c -fPIC -DPIC -o .libs/nco_cnv_arm.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -g -O2 -ffile-prefix-map=/build/reproducible-path/nco-5.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=gnu11 -c nco_aux.c -fPIC -DPIC -o .libs/nco_aux.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include 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-I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -g -O2 -ffile-prefix-map=/build/reproducible-path/nco-5.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=gnu11 -c nco_scl_utl.c -fPIC -DPIC -o .libs/nco_scl_utl.o -/bin/bash ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -g -O2 -ffile-prefix-map=/build/reproducible-path/nco-5.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=gnu11 -c -o nco_sld.lo nco_sld.c -nco_scm.c: In function 'nco_vrs_prn': -nco_scm.c:227:25: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] - 227 | const char date_cpp[]=__DATE__; /* [sng] Date from C pre-processor */ - | ^~~~~~~~ -nco_scm.c:228:25: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] - 228 | const char time_cpp[]=__TIME__; /* [sng] Time from C pre-processor */ - | ^~~~~~~~ -/bin/bash ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -g -O2 -ffile-prefix-map=/build/reproducible-path/nco-5.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=gnu11 -c -o nco_sng_utl.lo nco_sng_utl.c -/bin/bash ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -g -O2 -ffile-prefix-map=/build/reproducible-path/nco-5.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=gnu11 -c -o nco_sph.lo nco_sph.c nco_prn.c: In function 'nco_prn_var_val_lmt': nco_prn.c:1644:53: warning: '%s' directive writing up to 99 bytes into a region of size 86 [-Wformat-overflow=] 1644 | (void)sprintf(var_sng,"%%s%c%%ld--%%ld%c='%s' %%s",arr_lft_dlm,arr_rgt_dlm,dmn_sng); @@ -1529,6 +1549,24 @@ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ +/bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -g -O2 -ffile-prefix-map=/build/reproducible-path/nco-5.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=gnu11 -c -o nco_scl_utl.lo nco_scl_utl.c +/bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -g -O2 -ffile-prefix-map=/build/reproducible-path/nco-5.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=gnu11 -c -o nco_s1d.lo nco_s1d.c +/bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -g -O2 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-/bin/bash ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -g -O2 -ffile-prefix-map=/build/reproducible-path/nco-5.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=gnu11 -c -o nco_var_scv.lo nco_var_scv.c -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -g -O2 -ffile-prefix-map=/build/reproducible-path/nco-5.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=gnu11 -c nco_var_avg.c -fPIC -DPIC -o .libs/nco_var_avg.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -g -O2 -ffile-prefix-map=/build/reproducible-path/nco-5.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=gnu11 -c nco_var_lst.c -fPIC -DPIC -o .libs/nco_var_lst.o -/bin/bash ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -g -O2 -ffile-prefix-map=/build/reproducible-path/nco-5.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=gnu11 -c -o nco_var_utl.lo nco_var_utl.c -gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -g -O2 -ffile-prefix-map=/build/reproducible-path/nco-5.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=gnu11 -c -o ncbo.o ncbo.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -g -O2 -ffile-prefix-map=/build/reproducible-path/nco-5.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=gnu11 -c nco_var_avg.c -fPIC -DPIC -o .libs/nco_var_avg.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -g -O2 -ffile-prefix-map=/build/reproducible-path/nco-5.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=gnu11 -c nco_var_rth.c -fPIC -DPIC -o .libs/nco_var_rth.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -g -O2 -ffile-prefix-map=/build/reproducible-path/nco-5.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=gnu11 -c nco_var_scv.c -fPIC -DPIC -o .libs/nco_var_scv.o nco_sng_utl.c: In function 'nm2sng_cdl': nco_sng_utl.c:270:41: warning: '__builtin___snprintf_chk' output truncated before the last format character [-Wformat-truncation=] 270 | snprintf(chr_out_ptr,4,"\\%%%.2x",*chr_in_ptr); @@ -1586,9 +1621,11 @@ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 56 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -g -O2 -ffile-prefix-map=/build/reproducible-path/nco-5.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=gnu11 -c nco_var_scv.c -fPIC -DPIC -o .libs/nco_var_scv.o -gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -g -O2 -ffile-prefix-map=/build/reproducible-path/nco-5.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=gnu11 -c -o ncecat.o ncecat.c +/bin/sh ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -g -O2 -ffile-prefix-map=/build/reproducible-path/nco-5.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=gnu11 -c -o nco_var_utl.lo nco_var_utl.c +gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -g -O2 -ffile-prefix-map=/build/reproducible-path/nco-5.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=gnu11 -c -o ncbo.o ncbo.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -g -O2 -ffile-prefix-map=/build/reproducible-path/nco-5.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=gnu11 -c nco_var_utl.c -fPIC -DPIC -o .libs/nco_var_utl.o +gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -g -O2 -ffile-prefix-map=/build/reproducible-path/nco-5.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=gnu11 -c -o ncecat.o ncecat.c +gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -g -O2 -ffile-prefix-map=/build/reproducible-path/nco-5.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=gnu11 -c -o ncflint.o ncflint.c ncecat.c: In function 'main': ncecat.c:800:30: warning: '%02d' directive writing between 2 and 10 bytes into a region of size 3 [-Wformat-overflow=] 800 | sprintf(grp_out_sfx,"%02d",fl_idx); @@ -1607,14 +1644,13 @@ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ -gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -g -O2 -ffile-prefix-map=/build/reproducible-path/nco-5.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=gnu11 -c -o ncflint.o ncflint.c gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -g -O2 -ffile-prefix-map=/build/reproducible-path/nco-5.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=gnu11 -c -o ncks.o ncks.c gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -g -O2 -ffile-prefix-map=/build/reproducible-path/nco-5.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=gnu11 -c -o ncpdq.o ncpdq.c gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -g -O2 -ffile-prefix-map=/build/reproducible-path/nco-5.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=gnu11 -c -o ncra.o ncra.c gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -g -O2 -ffile-prefix-map=/build/reproducible-path/nco-5.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=gnu11 -c -o ncrename.o ncrename.c gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -g -O2 -ffile-prefix-map=/build/reproducible-path/nco-5.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=gnu11 -c -o ncwa.o ncwa.c gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -g -O2 -ffile-prefix-map=/build/reproducible-path/nco-5.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=gnu11 -c -o ncap_utl.o ncap_utl.c -test -f ncap_lex.c || /bin/bash ../../autobld/ylwrap ncap_lex.l lex.nco_yy.c ncap_lex.c -- flex -Pnco_yy +test -f ncap_lex.c || /bin/sh ../../autobld/ylwrap ncap_lex.l lex.nco_yy.c ncap_lex.c -- flex -Pnco_yy gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -g -O2 -ffile-prefix-map=/build/reproducible-path/nco-5.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=gnu11 -c -o ncap_lex.o ncap_lex.c ncap_lex.l: In function 'nco_yylex': ncap_lex.l:611:34: warning: '%s' directive writing up to 255 bytes into a region of size 147 [-Wformat-overflow=] @@ -1661,28 +1697,28 @@ nco_rgr.c:3947:113: warning: '%s' directive argument is null [-Wformat-overflow=] 3947 | if(nco_rgr_mth_typ == nco_rgr_mth_nil) (void)fprintf(stdout,"%s: WARNING %s reports map global attribute %s = %s does not match SCRIP/ESMF conventions that support only values of \"Conservative\" and \"Bilinear\" for this attribute. Proceeding anyway...\n",nco_prg_nm_get(),fnc_nm,cnv_sng,att_val); | ^~ -/bin/bash ../../libtool --tag=CXX --tag=CC --mode=link gcc -g -O2 -ffile-prefix-map=/build/reproducible-path/nco-5.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=gnu11 -release 5.1.4 -L/usr/lib/aarch64-linux-gnu -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lnetcdf -Wl,-z,relro -Wl,-z,now -o libnco.la -rpath /usr/lib/nco nco_att_utl.lo nco_aux.lo nco_bnr.lo nco_cln_utl.lo nco_cnf_dmn.lo nco_cnf_typ.lo nco_cnk.lo nco_cnv_arm.lo nco_cnv_csm.lo nco_crt.lo nco_ctl.lo nco_dbg.lo nco_dmn_utl.lo nco_fl_utl.lo nco_flt.lo nco_grp_utl.lo nco_grp_trv.lo nco_kd.lo nco_lmt.lo nco_lst_utl.lo nco_map.lo nco_md5.lo nco_mmr.lo nco_msa.lo nco_mss_val.lo nco_mta.lo nco_netcdf.lo nco_omp.lo nco_pck.lo nco_ply.lo nco_ply_lst.lo nco_ppc.lo nco_prn.lo nco_rec_var.lo nco_rgr.lo nco_rth_flt.lo nco_rth_utl.lo nco_scl_utl.lo nco_s1d.lo nco_scm.lo nco_sld.lo nco_sng_utl.lo nco_sph.lo nco_srm.lo nco_var_avg.lo nco_var_lst.lo nco_var_rth.lo nco_var_scv.lo nco_var_utl.lo -ludunits2 -lgsl -lnetcdf -lnetcdf -lnetcdf -lcurl -L/usr/lib/aarch64-linux-gnu -lgsl -lgslcblas -lm +/bin/sh ../../libtool --tag=CXX --tag=CC --mode=link gcc -g -O2 -ffile-prefix-map=/build/reproducible-path/nco-5.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=gnu11 -release 5.1.4 -L/usr/lib/aarch64-linux-gnu -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lnetcdf -Wl,-z,relro -Wl,-z,now -o libnco.la -rpath /usr/lib/nco nco_att_utl.lo nco_aux.lo nco_bnr.lo nco_cln_utl.lo nco_cnf_dmn.lo nco_cnf_typ.lo nco_cnk.lo nco_cnv_arm.lo nco_cnv_csm.lo nco_crt.lo nco_ctl.lo nco_dbg.lo nco_dmn_utl.lo nco_fl_utl.lo nco_flt.lo nco_grp_utl.lo nco_grp_trv.lo nco_kd.lo nco_lmt.lo nco_lst_utl.lo nco_map.lo nco_md5.lo nco_mmr.lo nco_msa.lo nco_mss_val.lo nco_mta.lo nco_netcdf.lo nco_omp.lo nco_pck.lo nco_ply.lo nco_ply_lst.lo nco_ppc.lo nco_prn.lo nco_rec_var.lo nco_rgr.lo nco_rth_flt.lo nco_rth_utl.lo nco_scl_utl.lo nco_s1d.lo nco_scm.lo nco_sld.lo nco_sng_utl.lo nco_sph.lo nco_srm.lo nco_var_avg.lo nco_var_lst.lo nco_var_rth.lo nco_var_scv.lo nco_var_utl.lo -ludunits2 -lgsl -lnetcdf -lnetcdf -lnetcdf -lcurl -L/usr/lib/aarch64-linux-gnu -lgsl -lgslcblas -lm libtool: link: g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/aarch64-linux-gnu/12/../../../aarch64-linux-gnu/crti.o /usr/lib/gcc/aarch64-linux-gnu/12/crtbeginS.o .libs/nco_att_utl.o .libs/nco_aux.o .libs/nco_bnr.o .libs/nco_cln_utl.o .libs/nco_cnf_dmn.o .libs/nco_cnf_typ.o .libs/nco_cnk.o .libs/nco_cnv_arm.o .libs/nco_cnv_csm.o .libs/nco_crt.o .libs/nco_ctl.o .libs/nco_dbg.o .libs/nco_dmn_utl.o .libs/nco_fl_utl.o .libs/nco_flt.o .libs/nco_grp_utl.o .libs/nco_grp_trv.o .libs/nco_kd.o .libs/nco_lmt.o .libs/nco_lst_utl.o .libs/nco_map.o .libs/nco_md5.o .libs/nco_mmr.o .libs/nco_msa.o .libs/nco_mss_val.o .libs/nco_mta.o .libs/nco_netcdf.o .libs/nco_omp.o .libs/nco_pck.o .libs/nco_ply.o .libs/nco_ply_lst.o .libs/nco_ppc.o .libs/nco_prn.o .libs/nco_rec_var.o .libs/nco_rgr.o .libs/nco_rth_flt.o .libs/nco_rth_utl.o .libs/nco_scl_utl.o .libs/nco_s1d.o .libs/nco_scm.o .libs/nco_sld.o .libs/nco_sng_utl.o .libs/nco_sph.o .libs/nco_srm.o .libs/nco_var_avg.o .libs/nco_var_lst.o .libs/nco_var_rth.o .libs/nco_var_scv.o .libs/nco_var_utl.o -L/usr/lib/aarch64-linux-gnu -L/usr/lib/aarch64-linux-gnu/hdf5/serial -ludunits2 -lnetcdf -lcurl -lgsl -lgslcblas -L/usr/lib/gcc/aarch64-linux-gnu/12 -L/usr/lib/gcc/aarch64-linux-gnu/12/../../../aarch64-linux-gnu -L/usr/lib/gcc/aarch64-linux-gnu/12/../../../../lib -L/lib/aarch64-linux-gnu -L/lib/../lib -L/usr/lib/../lib -L/usr/lib/gcc/aarch64-linux-gnu/12/../../.. -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/aarch64-linux-gnu/12/crtendS.o /usr/lib/gcc/aarch64-linux-gnu/12/../../../aarch64-linux-gnu/crtn.o -g -O2 -fstack-protector-strong -fopenmp -Wl,-z -Wl,relro -Wl,-z -Wl,now -fopenmp -Wl,-soname -Wl,libnco-5.1.4.so -o .libs/libnco-5.1.4.so libtool: link: (cd ".libs" && rm -f "libnco.so" && ln -s "libnco-5.1.4.so" "libnco.so") libtool: link: ( cd ".libs" && rm -f "libnco.la" && ln -s "../libnco.la" "libnco.la" ) -/bin/bash ../../libtool --tag=CXX --tag=CC --mode=link gcc -g -O2 -ffile-prefix-map=/build/reproducible-path/nco-5.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=gnu11 -L/usr/lib/aarch64-linux-gnu -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lnetcdf -Wl,-z,relro -Wl,-z,now -o ncatted ncatted.o libnco.la -ludunits2 -lgsl -lnetcdf -lnetcdf -lnetcdf -lcurl -L/usr/lib/aarch64-linux-gnu -lgsl -lgslcblas -lm -/bin/bash ../../libtool --tag=CXX --tag=CC --mode=link gcc -g -O2 -ffile-prefix-map=/build/reproducible-path/nco-5.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=gnu11 -L/usr/lib/aarch64-linux-gnu -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lnetcdf -Wl,-z,relro -Wl,-z,now -o ncbo ncbo.o libnco.la -ludunits2 -lgsl -lnetcdf -lnetcdf -lnetcdf -lcurl -L/usr/lib/aarch64-linux-gnu -lgsl -lgslcblas -lm -/bin/bash ../../libtool --tag=CXX --tag=CC --mode=link gcc -g -O2 -ffile-prefix-map=/build/reproducible-path/nco-5.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=gnu11 -L/usr/lib/aarch64-linux-gnu -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lnetcdf -Wl,-z,relro -Wl,-z,now -o ncecat ncecat.o libnco.la -ludunits2 -lgsl -lnetcdf -lnetcdf -lnetcdf -lcurl -L/usr/lib/aarch64-linux-gnu -lgsl -lgslcblas -lm -/bin/bash ../../libtool --tag=CXX --tag=CC --mode=link gcc -g -O2 -ffile-prefix-map=/build/reproducible-path/nco-5.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=gnu11 -L/usr/lib/aarch64-linux-gnu -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lnetcdf -Wl,-z,relro -Wl,-z,now -o ncflint ncflint.o libnco.la -ludunits2 -lgsl -lnetcdf -lnetcdf -lnetcdf -lcurl -L/usr/lib/aarch64-linux-gnu -lgsl -lgslcblas -lm -/bin/bash ../../libtool --tag=CXX --tag=CC --mode=link gcc -g -O2 -ffile-prefix-map=/build/reproducible-path/nco-5.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=gnu11 -L/usr/lib/aarch64-linux-gnu -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lnetcdf -Wl,-z,relro -Wl,-z,now -o ncks ncks.o libnco.la -ludunits2 -lgsl -lnetcdf -lnetcdf -lnetcdf -lcurl -L/usr/lib/aarch64-linux-gnu -lgsl -lgslcblas -lm -/bin/bash ../../libtool --tag=CXX --tag=CC --mode=link gcc -g -O2 -ffile-prefix-map=/build/reproducible-path/nco-5.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=gnu11 -L/usr/lib/aarch64-linux-gnu -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lnetcdf -Wl,-z,relro -Wl,-z,now -o ncpdq ncpdq.o libnco.la -ludunits2 -lgsl -lnetcdf -lnetcdf -lnetcdf -lcurl -L/usr/lib/aarch64-linux-gnu -lgsl -lgslcblas -lm -/bin/bash ../../libtool --tag=CXX --tag=CC --mode=link gcc -g -O2 -ffile-prefix-map=/build/reproducible-path/nco-5.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=gnu11 -L/usr/lib/aarch64-linux-gnu -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lnetcdf -Wl,-z,relro -Wl,-z,now -o ncra ncra.o libnco.la -ludunits2 -lgsl -lnetcdf -lnetcdf -lnetcdf -lcurl -L/usr/lib/aarch64-linux-gnu -lgsl -lgslcblas -lm -/bin/bash ../../libtool --tag=CXX --tag=CC --mode=link gcc -g -O2 -ffile-prefix-map=/build/reproducible-path/nco-5.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=gnu11 -L/usr/lib/aarch64-linux-gnu -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lnetcdf -Wl,-z,relro -Wl,-z,now -o ncrename ncrename.o libnco.la -ludunits2 -lgsl -lnetcdf -lnetcdf -lnetcdf -lcurl -L/usr/lib/aarch64-linux-gnu -lgsl -lgslcblas -lm -/bin/bash ../../libtool --tag=CXX --tag=CC --mode=link gcc -g -O2 -ffile-prefix-map=/build/reproducible-path/nco-5.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=gnu11 -L/usr/lib/aarch64-linux-gnu -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lnetcdf -Wl,-z,relro -Wl,-z,now -o ncwa ncwa.o ncap_utl.o ncap_lex.o libnco.la -ludunits2 -lgsl -lnetcdf -lnetcdf -lnetcdf -lcurl -L/usr/lib/aarch64-linux-gnu -lgsl -lgslcblas -lm -libtool: link: gcc -g -O2 -ffile-prefix-map=/build/reproducible-path/nco-5.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=gnu11 -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/ncecat ncecat.o -L/usr/lib/aarch64-linux-gnu -L/usr/lib/aarch64-linux-gnu/hdf5/serial ./.libs/libnco.so -ludunits2 -lnetcdf -lcurl -lgsl -lgslcblas -lm -fopenmp -Wl,-rpath -Wl,/usr/lib/nco +/bin/sh ../../libtool --tag=CXX --tag=CC --mode=link gcc -g -O2 -ffile-prefix-map=/build/reproducible-path/nco-5.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=gnu11 -L/usr/lib/aarch64-linux-gnu -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lnetcdf -Wl,-z,relro -Wl,-z,now -o ncatted ncatted.o libnco.la -ludunits2 -lgsl -lnetcdf -lnetcdf -lnetcdf -lcurl -L/usr/lib/aarch64-linux-gnu -lgsl -lgslcblas -lm +/bin/sh ../../libtool --tag=CXX --tag=CC --mode=link gcc -g -O2 -ffile-prefix-map=/build/reproducible-path/nco-5.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=gnu11 -L/usr/lib/aarch64-linux-gnu -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lnetcdf -Wl,-z,relro -Wl,-z,now -o ncbo ncbo.o libnco.la -ludunits2 -lgsl -lnetcdf -lnetcdf -lnetcdf -lcurl -L/usr/lib/aarch64-linux-gnu -lgsl -lgslcblas -lm +/bin/sh ../../libtool --tag=CXX --tag=CC --mode=link gcc -g -O2 -ffile-prefix-map=/build/reproducible-path/nco-5.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=gnu11 -L/usr/lib/aarch64-linux-gnu -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lnetcdf -Wl,-z,relro -Wl,-z,now -o ncecat ncecat.o libnco.la -ludunits2 -lgsl -lnetcdf -lnetcdf -lnetcdf -lcurl -L/usr/lib/aarch64-linux-gnu -lgsl -lgslcblas -lm +/bin/sh ../../libtool --tag=CXX --tag=CC --mode=link gcc -g -O2 -ffile-prefix-map=/build/reproducible-path/nco-5.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=gnu11 -L/usr/lib/aarch64-linux-gnu -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lnetcdf -Wl,-z,relro -Wl,-z,now -o ncflint ncflint.o libnco.la -ludunits2 -lgsl -lnetcdf -lnetcdf -lnetcdf -lcurl -L/usr/lib/aarch64-linux-gnu -lgsl -lgslcblas -lm +/bin/sh ../../libtool --tag=CXX --tag=CC --mode=link gcc -g -O2 -ffile-prefix-map=/build/reproducible-path/nco-5.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=gnu11 -L/usr/lib/aarch64-linux-gnu -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lnetcdf -Wl,-z,relro -Wl,-z,now -o ncks ncks.o libnco.la -ludunits2 -lgsl -lnetcdf -lnetcdf -lnetcdf -lcurl -L/usr/lib/aarch64-linux-gnu -lgsl -lgslcblas -lm +/bin/sh ../../libtool --tag=CXX --tag=CC --mode=link gcc -g -O2 -ffile-prefix-map=/build/reproducible-path/nco-5.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=gnu11 -L/usr/lib/aarch64-linux-gnu -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lnetcdf -Wl,-z,relro -Wl,-z,now -o ncpdq ncpdq.o libnco.la -ludunits2 -lgsl -lnetcdf -lnetcdf -lnetcdf -lcurl -L/usr/lib/aarch64-linux-gnu -lgsl -lgslcblas -lm +/bin/sh ../../libtool --tag=CXX --tag=CC --mode=link gcc -g -O2 -ffile-prefix-map=/build/reproducible-path/nco-5.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=gnu11 -L/usr/lib/aarch64-linux-gnu -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lnetcdf -Wl,-z,relro -Wl,-z,now -o ncra ncra.o libnco.la -ludunits2 -lgsl -lnetcdf -lnetcdf -lnetcdf -lcurl -L/usr/lib/aarch64-linux-gnu -lgsl -lgslcblas -lm +/bin/sh ../../libtool --tag=CXX --tag=CC --mode=link gcc -g -O2 -ffile-prefix-map=/build/reproducible-path/nco-5.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=gnu11 -L/usr/lib/aarch64-linux-gnu -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lnetcdf -Wl,-z,relro -Wl,-z,now -o ncrename ncrename.o libnco.la -ludunits2 -lgsl -lnetcdf -lnetcdf -lnetcdf -lcurl -L/usr/lib/aarch64-linux-gnu -lgsl -lgslcblas -lm +/bin/sh ../../libtool --tag=CXX --tag=CC --mode=link gcc -g -O2 -ffile-prefix-map=/build/reproducible-path/nco-5.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=gnu11 -L/usr/lib/aarch64-linux-gnu -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lnetcdf -Wl,-z,relro -Wl,-z,now -o ncwa ncwa.o ncap_utl.o ncap_lex.o libnco.la -ludunits2 -lgsl -lnetcdf -lnetcdf -lnetcdf -lcurl -L/usr/lib/aarch64-linux-gnu -lgsl -lgslcblas -lm libtool: link: gcc -g -O2 -ffile-prefix-map=/build/reproducible-path/nco-5.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=gnu11 -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/ncatted ncatted.o -L/usr/lib/aarch64-linux-gnu -L/usr/lib/aarch64-linux-gnu/hdf5/serial ./.libs/libnco.so -ludunits2 -lnetcdf -lcurl -lgsl -lgslcblas -lm -fopenmp -Wl,-rpath -Wl,/usr/lib/nco -libtool: link: gcc -g -O2 -ffile-prefix-map=/build/reproducible-path/nco-5.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=gnu11 -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/ncks ncks.o -L/usr/lib/aarch64-linux-gnu -L/usr/lib/aarch64-linux-gnu/hdf5/serial ./.libs/libnco.so -ludunits2 -lnetcdf -lcurl -lgsl -lgslcblas -lm -fopenmp -Wl,-rpath -Wl,/usr/lib/nco libtool: link: gcc -g -O2 -ffile-prefix-map=/build/reproducible-path/nco-5.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=gnu11 -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/ncbo ncbo.o -L/usr/lib/aarch64-linux-gnu -L/usr/lib/aarch64-linux-gnu/hdf5/serial ./.libs/libnco.so -ludunits2 -lnetcdf -lcurl -lgsl -lgslcblas -lm -fopenmp -Wl,-rpath -Wl,/usr/lib/nco libtool: link: gcc -g -O2 -ffile-prefix-map=/build/reproducible-path/nco-5.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=gnu11 -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/ncflint ncflint.o -L/usr/lib/aarch64-linux-gnu -L/usr/lib/aarch64-linux-gnu/hdf5/serial ./.libs/libnco.so -ludunits2 -lnetcdf -lcurl -lgsl -lgslcblas -lm -fopenmp -Wl,-rpath -Wl,/usr/lib/nco -libtool: link: gcc -g -O2 -ffile-prefix-map=/build/reproducible-path/nco-5.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=gnu11 -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/ncrename ncrename.o -L/usr/lib/aarch64-linux-gnu -L/usr/lib/aarch64-linux-gnu/hdf5/serial ./.libs/libnco.so -ludunits2 -lnetcdf -lcurl -lgsl -lgslcblas -lm -fopenmp -Wl,-rpath -Wl,/usr/lib/nco libtool: link: gcc -g -O2 -ffile-prefix-map=/build/reproducible-path/nco-5.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=gnu11 -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/ncpdq ncpdq.o -L/usr/lib/aarch64-linux-gnu -L/usr/lib/aarch64-linux-gnu/hdf5/serial ./.libs/libnco.so -ludunits2 -lnetcdf -lcurl -lgsl -lgslcblas -lm -fopenmp -Wl,-rpath -Wl,/usr/lib/nco -libtool: link: gcc -g -O2 -ffile-prefix-map=/build/reproducible-path/nco-5.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=gnu11 -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/ncwa ncwa.o ncap_utl.o ncap_lex.o -L/usr/lib/aarch64-linux-gnu -L/usr/lib/aarch64-linux-gnu/hdf5/serial ./.libs/libnco.so -ludunits2 -lnetcdf -lcurl -lgsl -lgslcblas -lm -fopenmp -Wl,-rpath -Wl,/usr/lib/nco +libtool: link: gcc -g -O2 -ffile-prefix-map=/build/reproducible-path/nco-5.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=gnu11 -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/ncecat ncecat.o -L/usr/lib/aarch64-linux-gnu -L/usr/lib/aarch64-linux-gnu/hdf5/serial ./.libs/libnco.so -ludunits2 -lnetcdf -lcurl -lgsl -lgslcblas -lm -fopenmp -Wl,-rpath -Wl,/usr/lib/nco libtool: link: gcc -g -O2 -ffile-prefix-map=/build/reproducible-path/nco-5.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=gnu11 -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/ncra ncra.o -L/usr/lib/aarch64-linux-gnu -L/usr/lib/aarch64-linux-gnu/hdf5/serial ./.libs/libnco.so -ludunits2 -lnetcdf -lcurl -lgsl -lgslcblas -lm -fopenmp -Wl,-rpath -Wl,/usr/lib/nco +libtool: link: gcc -g -O2 -ffile-prefix-map=/build/reproducible-path/nco-5.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=gnu11 -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/ncks ncks.o -L/usr/lib/aarch64-linux-gnu -L/usr/lib/aarch64-linux-gnu/hdf5/serial ./.libs/libnco.so -ludunits2 -lnetcdf -lcurl -lgsl -lgslcblas -lm -fopenmp -Wl,-rpath -Wl,/usr/lib/nco +libtool: link: gcc -g -O2 -ffile-prefix-map=/build/reproducible-path/nco-5.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=gnu11 -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/ncrename ncrename.o -L/usr/lib/aarch64-linux-gnu -L/usr/lib/aarch64-linux-gnu/hdf5/serial ./.libs/libnco.so -ludunits2 -lnetcdf -lcurl -lgsl -lgslcblas -lm -fopenmp -Wl,-rpath -Wl,/usr/lib/nco +libtool: link: gcc -g -O2 -ffile-prefix-map=/build/reproducible-path/nco-5.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=gnu11 -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/ncwa ncwa.o ncap_utl.o ncap_lex.o -L/usr/lib/aarch64-linux-gnu -L/usr/lib/aarch64-linux-gnu/hdf5/serial ./.libs/libnco.so -ludunits2 -lnetcdf -lcurl -lgsl -lgslcblas -lm -fopenmp -Wl,-rpath -Wl,/usr/lib/nco make[5]: Leaving directory '/build/reproducible-path/nco-5.1.4/src/nco' Making all in nco++ make[5]: Entering directory '/build/reproducible-path/nco-5.1.4/src/nco++' @@ -1699,7 +1735,7 @@ g++ -DHAVE_CONFIG_H -I. -I../.. -I./ -I../nco -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -g -O2 -ffile-prefix-map=/build/reproducible-path/nco-5.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -c -o NcapVar.o NcapVar.cc g++ -DHAVE_CONFIG_H -I. -I../.. -I./ -I../nco -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -g -O2 -ffile-prefix-map=/build/reproducible-path/nco-5.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -c -o NcapVarVector.o NcapVarVector.cc In file included from libnco++.hh:26, - from Invoke.cc:13: + from ncap2.cc:80: fmc_gsl_cls.hh:49: warning: "NCO_GSL_VERSION" redefined 49 | # define NCO_GSL_VERSION ( NCO_GSL_MAJOR_VERSION * 100 + NCO_GSL_MINOR_VERSION * 10 + NCO_GSL_PATCH_VERSION ) | @@ -1708,7 +1744,7 @@ 443 | #define NCO_GSL_VERSION 207 | In file included from libnco++.hh:26, - from ncap2.cc:80: + from Invoke.cc:13: fmc_gsl_cls.hh:49: warning: "NCO_GSL_VERSION" redefined 49 | # define NCO_GSL_VERSION ( NCO_GSL_MAJOR_VERSION * 100 + NCO_GSL_MINOR_VERSION * 10 + NCO_GSL_PATCH_VERSION ) | @@ -1736,6 +1772,21 @@ 49 | # define NCO_GSL_VERSION ( NCO_GSL_MAJOR_VERSION * 100 + NCO_GSL_MINOR_VERSION * 10 + NCO_GSL_PATCH_VERSION ) | g++ -DHAVE_CONFIG_H -I. -I../.. -I./ -I../nco -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -g -O2 -ffile-prefix-map=/build/reproducible-path/nco-5.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -c -o ncoLexer.o ncoLexer.cpp +In file included from prs_cls.hh:16, + from ncoGrammar.g:30: +NcapVector.hh:23:33: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] + 23 | struct less_mag : public std::binary_function< T, T, bool> + | ^~~~~~~~~~~~~~~ +In file included from /usr/include/c++/12/string:48, + from /usr/include/c++/12/bits/locale_classes.h:40, + from /usr/include/c++/12/bits/ios_base.h:41, + from /usr/include/c++/12/ios:42, + from /usr/include/c++/12/istream:38, + from /usr/include/c++/12/sstream:38, + from fmc_gsl_cls.hh:21: +/usr/include/c++/12/bits/stl_function.h:131:12: note: declared here + 131 | struct binary_function + | ^~~~~~~~~~~~~~~ g++ -DHAVE_CONFIG_H -I. -I../.. -I./ -I../nco -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -g -O2 -ffile-prefix-map=/build/reproducible-path/nco-5.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -c -o ncoParser.o ncoParser.cpp In file included from ncap2_utl.hh:54, from vtl_cls.hh:11, @@ -1749,33 +1800,29 @@ /usr/include/c++/12/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ -In file included from prs_cls.hh:16, - from ncoGrammar.g:30, - from fmc_all_cls.hh:19, - from fmc_all_cls.cc:10: +In file included from ncap2_utl.hh:54, + from ncap2_utl.cc:11: NcapVector.hh:23:33: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 23 | struct less_mag : public std::binary_function< T, T, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12/string:48, - from fmc_all_cls.hh:14: + from ncap2_utl.hh:20: /usr/include/c++/12/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ -g++ -DHAVE_CONFIG_H -I. -I../.. -I./ -I../nco -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -g -O2 -ffile-prefix-map=/build/reproducible-path/nco-5.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -c -o ncoTree.o ncoTree.cpp In file included from ncap2_utl.hh:54, - from ncap2_utl.cc:11: + from ncap2_att.hh:42, + from ncap2_att.cc:1: NcapVector.hh:23:33: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 23 | struct less_mag : public std::binary_function< T, T, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12/string:48, - from ncap2_utl.hh:20: + from ncap2_att.hh:9: /usr/include/c++/12/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from ncap2_utl.hh:54, - from vtl_cls.hh:11, - from fmc_cls.hh:13, - from libnco++.hh:22: + from prs_cls.cc:23: NcapVector.hh:23:33: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 23 | struct less_mag : public std::binary_function< T, T, bool> | ^~~~~~~~~~~~~~~ @@ -1783,12 +1830,13 @@ from /usr/include/c++/12/bits/locale_classes.h:40, from /usr/include/c++/12/bits/ios_base.h:41, from /usr/include/c++/12/ios:42, - from /usr/include/c++/12/istream:38, - from /usr/include/c++/12/fstream:38, - from Invoke.cc:9: + from /usr/include/c++/12/ostream:38, + from /usr/include/c++/12/iostream:39, + from prs_cls.cc:13: /usr/include/c++/12/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ +g++ -DHAVE_CONFIG_H -I. -I../.. -I./ -I../nco -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -g -O2 -ffile-prefix-map=/build/reproducible-path/nco-5.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -c -o ncoTree.o ncoTree.cpp In file included from ncap2_utl.hh:54, from vtl_cls.hh:11, from fmc_cls.hh:13, @@ -1797,52 +1845,39 @@ 23 | struct less_mag : public std::binary_function< T, T, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12/string:48, - from ncap2.cc:45: -/usr/include/c++/12/bits/stl_function.h:131:12: note: declared here - 131 | struct binary_function - | ^~~~~~~~~~~~~~~ -In file included from ncap2_utl.hh:54, - from ncap2_att.hh:42, - from ncap2_att.cc:1: -NcapVector.hh:23:33: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] - 23 | struct less_mag : public std::binary_function< T, T, bool> - | ^~~~~~~~~~~~~~~ -In file included from /usr/include/c++/12/string:48, - from ncap2_att.hh:9: + from /usr/include/c++/12/bits/locale_classes.h:40, + from /usr/include/c++/12/bits/ios_base.h:41, + from /usr/include/c++/12/ios:42, + from /usr/include/c++/12/istream:38, + from /usr/include/c++/12/fstream:38, + from Invoke.cc:9: /usr/include/c++/12/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from ncap2_utl.hh:54, - from prs_cls.cc:23: + from vtl_cls.hh:11, + from fmc_cls.hh:13, + from libnco++.hh:22: NcapVector.hh:23:33: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 23 | struct less_mag : public std::binary_function< T, T, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12/string:48, - from /usr/include/c++/12/bits/locale_classes.h:40, - from /usr/include/c++/12/bits/ios_base.h:41, - from /usr/include/c++/12/ios:42, - from /usr/include/c++/12/ostream:38, - from /usr/include/c++/12/iostream:39, - from prs_cls.cc:13: + from ncap2.cc:45: /usr/include/c++/12/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from prs_cls.hh:16, - from ncoGrammar.g:30: + from ncoGrammar.g:30, + from fmc_all_cls.hh:19, + from fmc_all_cls.cc:10: NcapVector.hh:23:33: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 23 | struct less_mag : public std::binary_function< T, T, bool> | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/12/string:48, - from /usr/include/c++/12/bits/locale_classes.h:40, - from /usr/include/c++/12/bits/ios_base.h:41, - from /usr/include/c++/12/ios:42, - from /usr/include/c++/12/istream:38, - from /usr/include/c++/12/sstream:38, - from fmc_gsl_cls.hh:21: + from fmc_all_cls.hh:14: /usr/include/c++/12/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ -g++ -DHAVE_CONFIG_H -I. -I../.. -I./ -I../nco -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -g -O2 -ffile-prefix-map=/build/reproducible-path/nco-5.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -c -o nco_gsl.o nco_gsl.cc In file included from prs_cls.hh:16, from ncoGrammar.g:30, from ncoLexer.cpp:2: @@ -1856,6 +1891,7 @@ /usr/include/c++/12/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ +g++ -DHAVE_CONFIG_H -I. -I../.. -I./ -I../nco -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -g -O2 -ffile-prefix-map=/build/reproducible-path/nco-5.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -c -o nco_gsl.o nco_gsl.cc In file included from prs_cls.hh:16, from ncoGrammar.g:30, from ncoParser.cpp:2: @@ -1883,7 +1919,7 @@ /usr/include/c++/12/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ -/bin/bash ../../libtool --tag=CXX --tag=CXX --mode=link g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/nco-5.1.4=. -fstack-protector-strong -Wformat -Werror=format-security ../nco/libnco.la -lantlr -L/usr/lib/aarch64-linux-gnu -lgsl -lgslcblas -lm -L/usr/lib/aarch64-linux-gnu -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lnetcdf -Wl,-z,relro -Wl,-z,now -o ncap2 Invoke.o ncap2.o ncap2_utl.o ncap2_att.o sdo_utl.o sym_cls.o fmc_cls.o fmc_all_cls.o fmc_gsl_cls.o prs_cls.o NcapVar.o NcapVarVector.o ncoLexer.o ncoParser.o ncoTree.o nco_gsl.o -ludunits2 -lgsl -lnetcdf -lnetcdf -lnetcdf -lcurl -L/usr/lib/aarch64-linux-gnu -lgsl -lgslcblas -lm +/bin/sh ../../libtool --tag=CXX --tag=CXX --mode=link g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/nco-5.1.4=. -fstack-protector-strong -Wformat -Werror=format-security ../nco/libnco.la -lantlr -L/usr/lib/aarch64-linux-gnu -lgsl -lgslcblas -lm -L/usr/lib/aarch64-linux-gnu -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lnetcdf -Wl,-z,relro -Wl,-z,now -o ncap2 Invoke.o ncap2.o ncap2_utl.o ncap2_att.o sdo_utl.o sym_cls.o fmc_cls.o fmc_all_cls.o fmc_gsl_cls.o prs_cls.o NcapVar.o NcapVarVector.o ncoLexer.o ncoParser.o ncoTree.o nco_gsl.o -ludunits2 -lgsl -lnetcdf -lnetcdf -lnetcdf -lcurl -L/usr/lib/aarch64-linux-gnu -lgsl -lgslcblas -lm libtool: link: g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/nco-5.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/ncap2 Invoke.o ncap2.o ncap2_utl.o ncap2_att.o sdo_utl.o sym_cls.o fmc_cls.o fmc_all_cls.o fmc_gsl_cls.o prs_cls.o NcapVar.o NcapVarVector.o ncoLexer.o ncoParser.o ncoTree.o nco_gsl.o ../nco/.libs/libnco.so -lantlr -L/usr/lib/aarch64-linux-gnu -L/usr/lib/aarch64-linux-gnu/hdf5/serial -ludunits2 -lnetcdf -lcurl -lgsl -lgslcblas -lm -fopenmp -Wl,-rpath -Wl,/usr/lib/nco make[5]: Leaving directory '/build/reproducible-path/nco-5.1.4/src/nco++' make[5]: Entering directory '/build/reproducible-path/nco-5.1.4/src' @@ -1899,13 +1935,13 @@ restore=: && backupdir=".am$$" && \ am__cwd=`pwd` && CDPATH="${ZSH_VERSION+.}:" && cd . && \ rm -rf $backupdir && mkdir $backupdir && \ -if (/bin/bash '/build/reproducible-path/nco-5.1.4/autobld/missing' makeinfo --version) >/dev/null 2>&1; then \ +if (/bin/sh '/build/reproducible-path/nco-5.1.4/autobld/missing' makeinfo --version) >/dev/null 2>&1; then \ for f in nco.info nco.info-[0-9] nco.info-[0-9][0-9] nco.i[0-9] nco.i[0-9][0-9]; do \ if test -f $f; then mv $f $backupdir; restore=mv; else :; fi; \ done; \ else :; fi && \ cd "$am__cwd"; \ -if /bin/bash '/build/reproducible-path/nco-5.1.4/autobld/missing' makeinfo -I . \ +if /bin/sh '/build/reproducible-path/nco-5.1.4/autobld/missing' makeinfo -I . \ -o nco.info nco.texi; \ then \ rc=0; \ @@ -1931,7 +1967,7 @@ make[2]: Leaving directory '/build/reproducible-path/nco-5.1.4/doc' make[2]: Entering directory '/build/reproducible-path/nco-5.1.4/doc' rm -rf nco.htp -if /bin/bash '/build/reproducible-path/nco-5.1.4/autobld/missing' makeinfo --html --ifinfo --no-split -I . \ +if /bin/sh '/build/reproducible-path/nco-5.1.4/autobld/missing' makeinfo --html --ifinfo --no-split -I . \ -o nco.htp nco.texi; \ then \ rm -rf nco.html && mv nco.htp nco.html; \ @@ -2008,8 +2044,8 @@ You do not have a $DATA directory defined and the test files are several GB. Where would you like to write the test data? Data will be placed in the indicated directory, under nco_bm, using the '--caseid' option to set the name of the subdirectory, if any. -[/nonexistent/first-build] or specify: You entered [] -Making /nonexistent/first-build/nco_bm/ & continuing +[/nonexistent/second-build] or specify: You entered [] +Making /nonexistent/second-build/nco_bm/ & continuing mkdir: cannot create directory '/nonexistent': Permission denied Cannot get socket - continuing anyway. @@ -3124,7 +3160,7 @@ -Linux codethink04-arm64 6.1.0-17-cloud-arm64 #1 SMP Debian 6.1.69-1 (2023-12-30) aarch64 GNU/Linux; gcc (Debian 12.2.0-14) 12.2.0; +Linux i-capture-the-hostname 6.1.0-17-cloud-arm64 #1 SMP Debian 6.1.69-1 (2023-12-30) aarch64 GNU/Linux; gcc (Debian 12.2.0-14) 12.2.0; Test Results Seconds to complete -------------------------- ---------------------------------------- @@ -3133,14 +3169,14 @@ ncatted: 0 7 7 0.00 0.00 0.00 0.00 0.00 ncbo: 0 15 15 0.00 0.00 0.00 0.00 0.00 ncflint: 0 5 5 0.00 0.00 0.00 0.00 0.00 - nces: 0 14 14 0.04 0.00 0.00 0.00 0.00 + nces: 0 14 14 0.02 0.00 0.00 0.00 0.00 ncecat: 0 5 5 0.00 0.00 0.00 0.00 0.00 - ncks: 18 29 47 3.44 0.00 0.00 0.00 0.00 + ncks: 18 29 47 1.63 0.00 0.00 0.00 0.00 ncpdq: 0 35 35 0.00 0.00 0.00 0.00 0.00 - ncra: 0 31 31 0.01 0.00 0.00 0.00 0.00 - ncrcat: 0 28 28 0.03 0.00 0.00 0.00 0.00 + ncra: 0 31 31 0.09 0.00 0.00 0.00 0.00 + ncrcat: 0 28 28 0.04 0.00 0.00 0.00 0.00 ncrename: 0 10 10 0.00 0.00 0.00 0.00 0.00 - ncwa: 0 58 58 0.05 0.00 0.00 0.00 0.00 + ncwa: 0 58 58 0.36 0.00 0.00 0.00 0.00 NB:MD5: test passes MD5 checksum on file(s) May be more than one intermediate file. SVx: test passes single terminal value check SVn=numeric, SVa=alphabetic @@ -3171,13 +3207,13 @@ make[4]: Entering directory '/build/reproducible-path/nco-5.1.4/src/nco' make[5]: Entering directory '/build/reproducible-path/nco-5.1.4/src/nco' /bin/mkdir -p '/build/reproducible-path/nco-5.1.4/debian/nco/usr/lib/nco' - /bin/bash ../../libtool --tag=CXX --mode=install /usr/bin/install -c libnco.la '/build/reproducible-path/nco-5.1.4/debian/nco/usr/lib/nco' + /bin/sh ../../libtool --tag=CXX --mode=install /usr/bin/install -c libnco.la '/build/reproducible-path/nco-5.1.4/debian/nco/usr/lib/nco' libtool: install: /usr/bin/install -c .libs/libnco-5.1.4.so /build/reproducible-path/nco-5.1.4/debian/nco/usr/lib/nco/libnco-5.1.4.so libtool: install: (cd /build/reproducible-path/nco-5.1.4/debian/nco/usr/lib/nco && { ln -s -f libnco-5.1.4.so libnco.so || { rm -f libnco.so && ln -s libnco-5.1.4.so libnco.so; }; }) libtool: install: /usr/bin/install -c .libs/libnco.lai /build/reproducible-path/nco-5.1.4/debian/nco/usr/lib/nco/libnco.la libtool: warning: remember to run 'libtool --finish /usr/lib/nco' /bin/mkdir -p '/build/reproducible-path/nco-5.1.4/debian/nco/usr/bin' - /bin/bash ../../libtool --tag=CXX --mode=install /usr/bin/install -c ncatted ncbo ncecat ncflint ncks ncpdq ncra ncrename ncwa '/build/reproducible-path/nco-5.1.4/debian/nco/usr/bin' + /bin/sh ../../libtool --tag=CXX --mode=install /usr/bin/install -c ncatted ncbo ncecat ncflint ncks ncpdq ncra ncrename ncwa '/build/reproducible-path/nco-5.1.4/debian/nco/usr/bin' libtool: warning: 'libnco.la' has not been installed in '/usr/lib/nco' libtool: install: /usr/bin/install -c .libs/ncatted /build/reproducible-path/nco-5.1.4/debian/nco/usr/bin/ncatted libtool: warning: 'libnco.la' has not been installed in '/usr/lib/nco' @@ -3210,7 +3246,7 @@ make[4]: Entering directory '/build/reproducible-path/nco-5.1.4/src/nco++' make[5]: Entering directory '/build/reproducible-path/nco-5.1.4/src/nco++' /bin/mkdir -p '/build/reproducible-path/nco-5.1.4/debian/nco/usr/bin' - /bin/bash ../../libtool --tag=CXX --mode=install /usr/bin/install -c ncap2 '/build/reproducible-path/nco-5.1.4/debian/nco/usr/bin' + /bin/sh ../../libtool --tag=CXX --mode=install /usr/bin/install -c ncap2 '/build/reproducible-path/nco-5.1.4/debian/nco/usr/bin' libtool: warning: '../nco/libnco.la' has not been installed in '/usr/lib/nco' libtool: install: /usr/bin/install -c .libs/ncap2 /build/reproducible-path/nco-5.1.4/debian/nco/usr/bin/ncap2 make[5]: Nothing to be done for 'install-data-am'. @@ -3273,14 +3309,14 @@ dh_makeshlibs -Xusr/lib/nco make[1]: Leaving directory '/build/reproducible-path/nco-5.1.4' dh_shlibdeps -O--buildsystem=autoconf -dpkg-shlibdeps: warning: debian/nco/usr/lib/nco/libnco-5.1.4.so contains an unresolvable reference to symbol nco_mrd_cnv_get: it's probably a plugin +dpkg-shlibdeps: warning: debian/nco/usr/lib/nco/libnco-5.1.4.so contains an unresolvable reference to symbol nco_not_mss_val_sng_get: it's probably a plugin dpkg-shlibdeps: warning: 14 other similar warnings have been skipped (use -v to see them all) dh_installdeb -O--buildsystem=autoconf dh_gencontrol -O--buildsystem=autoconf dh_md5sums -O--buildsystem=autoconf dh_builddeb -O--buildsystem=autoconf -dpkg-deb: building package 'nco' in '../nco_5.1.4-1+deb12u1_arm64.deb'. dpkg-deb: building package 'nco-dbgsym' in '../nco-dbgsym_5.1.4-1+deb12u1_arm64.deb'. +dpkg-deb: building package 'nco' in '../nco_5.1.4-1+deb12u1_arm64.deb'. dpkg-genbuildinfo --build=binary -O../nco_5.1.4-1+deb12u1_arm64.buildinfo dpkg-genchanges --build=binary -O../nco_5.1.4-1+deb12u1_arm64.changes dpkg-genchanges: info: binary-only upload (no source code included) @@ -3288,12 +3324,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/1458228/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/1458228/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/3286079 and its subdirectories -I: Current time: Sun Jan 7 05:01:28 -12 2024 -I: pbuilder-time-stamp: 1704646888 +I: removing directory /srv/workspace/pbuilder/1458228 and its subdirectories +I: Current time: Mon Jan 8 07:09:38 +14 2024 +I: pbuilder-time-stamp: 1704647378