Diff of the two buildlogs: -- --- b1/build.log 2024-01-12 09:57:28.778531925 +0000 +++ b2/build.log 2024-01-12 10:41:15.607022173 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Thu Feb 13 03:40:16 -12 2025 -I: pbuilder-time-stamp: 1739461216 +I: Current time: Fri Jan 12 23:57:39 +14 2024 +I: pbuilder-time-stamp: 1705053459 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bookworm-reproducible-base.tgz] I: copying local configuration @@ -29,49 +29,81 @@ dpkg-source: info: applying tutorial-spce-py3.patch I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/3672570/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/1295862/tmp/hooks/D01_modify_environment starting +debug: Running on ionos11-amd64. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Jan 12 09:57 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/1295862/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/1295862/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='amd64' - DEBIAN_FRONTEND='noninteractive' - DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=16 ' - DISTRIBUTION='bookworm' - HOME='/root' - HOST_ARCH='amd64' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="2" [2]="15" [3]="1" [4]="release" [5]="x86_64-pc-linux-gnu") + BASH_VERSION='5.2.15(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=amd64 + DEBIAN_FRONTEND=noninteractive + DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=15 ' + DIRSTACK=() + DISTRIBUTION=bookworm + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=x86_64 + HOST_ARCH=amd64 IFS=' ' - INVOCATION_ID='31509d1bcdfa4683b158e3f4dc7aca19' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='3672570' - PS1='# ' - PS2='> ' + INVOCATION_ID=20667b22a3b5436fbacb601c53dc07f7 + LANG=C + LANGUAGE=et_EE:et + LC_ALL=C + MACHTYPE=x86_64-pc-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=1295862 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.smwY3g6l/pbuilderrc_XAsI --distribution bookworm --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bookworm-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.smwY3g6l/b1 --logfile b1/build.log votca_2022.1-1.dsc' - SUDO_GID='111' - SUDO_UID='106' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://85.184.249.68:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.smwY3g6l/pbuilderrc_asq9 --distribution bookworm --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bookworm-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.smwY3g6l/b2 --logfile b2/build.log votca_2022.1-1.dsc' + SUDO_GID=111 + SUDO_UID=106 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://78.137.99.97:3128 I: uname -a - Linux ionos15-amd64 6.5.0-0.deb12.4-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.5.10-1~bpo12+1 (2023-11-23) x86_64 GNU/Linux + Linux i-capture-the-hostname 6.1.0-17-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.69-1 (2023-12-30) x86_64 GNU/Linux I: ls -l /bin total 5632 -rwxr-xr-x 1 root root 1265648 Apr 23 2023 bash @@ -129,15 +161,15 @@ -rwxr-xr-x 1 root root 52112 Sep 20 2022 readlink -rwxr-xr-x 1 root root 72752 Sep 20 2022 rm -rwxr-xr-x 1 root root 56240 Sep 20 2022 rmdir - -rwxr-xr-x 1 root root 27560 Jul 28 2023 run-parts + -rwxr-xr-x 1 root root 27560 Jul 28 23:46 run-parts -rwxr-xr-x 1 root root 126424 Jan 5 2023 sed - lrwxrwxrwx 1 root root 4 Jan 5 2023 sh -> dash + lrwxrwxrwx 1 root root 9 Jan 12 09:57 sh -> /bin/bash -rwxr-xr-x 1 root root 43888 Sep 20 2022 sleep -rwxr-xr-x 1 root root 85008 Sep 20 2022 stty -rwsr-xr-x 1 root root 72000 Mar 23 2023 su -rwxr-xr-x 1 root root 39824 Sep 20 2022 sync -rwxr-xr-x 1 root root 531984 Apr 6 2023 tar - -rwxr-xr-x 1 root root 14520 Jul 28 2023 tempfile + -rwxr-xr-x 1 root root 14520 Jul 28 23:46 tempfile -rwxr-xr-x 1 root root 109616 Sep 20 2022 touch -rwxr-xr-x 1 root root 35664 Sep 20 2022 true -rwxr-xr-x 1 root root 14568 Mar 23 2023 ulockmgr_server @@ -157,7 +189,7 @@ -rwxr-xr-x 1 root root 2206 Apr 10 2022 zless -rwxr-xr-x 1 root root 1842 Apr 10 2022 zmore -rwxr-xr-x 1 root root 4577 Apr 10 2022 znew -I: user script /srv/workspace/pbuilder/3672570/tmp/hooks/D02_print_environment finished +I: user script /srv/workspace/pbuilder/1295862/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -723,7 +755,7 @@ Get: 456 http://deb.debian.org/debian bookworm/main amd64 sphinx-rtd-theme-common all 1.2.0+dfsg-1 [997 kB] Get: 457 http://deb.debian.org/debian bookworm/main amd64 python3-sphinx-rtd-theme all 1.2.0+dfsg-1 [27.7 kB] Get: 458 http://deb.debian.org/debian bookworm/main amd64 txt2tags all 3.4-4 [112 kB] -Fetched 399 MB in 4s (89.4 MB/s) +Fetched 399 MB in 28s (14.1 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package fonts-lato. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 18148 files and directories currently installed.) @@ -2178,8 +2210,8 @@ Setting up tzdata (2023c-5+deb12u1) ... Current default time zone: 'Etc/UTC' -Local time is now: Thu Feb 13 15:41:30 UTC 2025. -Universal Time is now: Thu Feb 13 15:41:30 UTC 2025. +Local time is now: Fri Jan 12 10:03:41 UTC 2024. +Universal Time is now: Fri Jan 12 10:03:41 UTC 2024. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up libgts-0.7-5:amd64 (0.7.6+darcs121130-5+b1) ... @@ -2602,7 +2634,11 @@ Building tag database... -> Finished parsing the build-deps I: Building the package -I: Running cd /build/reproducible-path/votca-2022.1/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../votca_2022.1-1_source.changes +I: user script /srv/workspace/pbuilder/1295862/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for bookworm +I: user script /srv/workspace/pbuilder/1295862/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/votca-2022.1/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../votca_2022.1-1_source.changes dpkg-buildpackage: info: source package votca dpkg-buildpackage: info: source version 2022.1-1 dpkg-buildpackage: info: source distribution unstable @@ -2879,7 +2915,7 @@ debian/rules override_dh_auto_build-indep make[1]: Entering directory '/build/reproducible-path/votca-2022.1' dh_auto_build - cd obj-x86_64-linux-gnu && make -j16 "INSTALL=install --strip-program=true" VERBOSE=1 + cd obj-x86_64-linux-gnu && make -j15 "INSTALL=install --strip-program=true" VERBOSE=1 make[2]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' /usr/bin/cmake -S/build/reproducible-path/votca-2022.1 -B/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/CMakeFiles /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu//CMakeFiles/progress.marks @@ -2889,275 +2925,275 @@ make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/libxtp /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp/CMakeFiles/gitversion-xtp.dir/DependInfo.cmake --color= make -f tools/src/libtools/CMakeFiles/gitversion.dir/build.make tools/src/libtools/CMakeFiles/gitversion.dir/depend -make -f csg/src/libcsg/CMakeFiles/gitversion-csg.dir/build.make csg/src/libcsg/CMakeFiles/gitversion-csg.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/tools/src/libtools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools/CMakeFiles/gitversion.dir/DependInfo.cmake --color= -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f tools/scripts/CMakeFiles/votca_help2doc_build.dir/build.make tools/scripts/CMakeFiles/votca_help2doc_build.dir/depend +make -f csg/src/libcsg/CMakeFiles/gitversion-csg.dir/build.make csg/src/libcsg/CMakeFiles/gitversion-csg.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/libcsg /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg/CMakeFiles/gitversion-csg.dir/DependInfo.cmake --color= -make -f xtp/src/libxtp/CMakeFiles/gitversion-xtp.dir/build.make xtp/src/libxtp/CMakeFiles/gitversion-xtp.dir/build +make -f tools/scripts/CMakeFiles/votca_help2doc_build.dir/build.make tools/scripts/CMakeFiles/votca_help2doc_build.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/tools/scripts /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/CMakeFiles/votca_help2doc_build.dir/DependInfo.cmake --color= -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/cmake -DTOP_SOURCE_DIR="/build/reproducible-path/votca-2022.1" -DGIT_EXECUTABLE="" -P /build/reproducible-path/votca-2022.1/xtp/CMakeModules/gitversion.cmake make -f tools/scripts/CMakeFiles/votca_compare_build.dir/build.make tools/scripts/CMakeFiles/votca_compare_build.dir/depend +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f tools/share/man/CMakeFiles/votca_tools_manpages.dir/build.make tools/share/man/CMakeFiles/votca_tools_manpages.dir/depend cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/tools/scripts /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/CMakeFiles/votca_compare_build.dir/DependInfo.cmake --color= -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f xtp/src/libxtp/CMakeFiles/gitversion-xtp.dir/build.make xtp/src/libxtp/CMakeFiles/gitversion-xtp.dir/build make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/tools/share/man /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/share/man /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/share/man/CMakeFiles/votca_tools_manpages.dir/DependInfo.cmake --color= +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/cmake -DTOP_SOURCE_DIR="/build/reproducible-path/votca-2022.1" -DGIT_EXECUTABLE="" -P /build/reproducible-path/votca-2022.1/xtp/CMakeModules/gitversion.cmake make -f tools/src/libtools/CMakeFiles/gitversion.dir/build.make tools/src/libtools/CMakeFiles/gitversion.dir/build make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f csg/src/libcsg/CMakeFiles/gitversion-csg.dir/build.make csg/src/libcsg/CMakeFiles/gitversion-csg.dir/build cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools && /usr/bin/cmake -DTOP_SOURCE_DIR="/build/reproducible-path/votca-2022.1" -DGIT_EXECUTABLE="" -P /build/reproducible-path/votca-2022.1/tools/CMakeModules/gitversion.cmake +make -f csg/src/libcsg/CMakeFiles/gitversion-csg.dir/build.make csg/src/libcsg/CMakeFiles/gitversion-csg.dir/build +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg && /usr/bin/cmake -DTOP_SOURCE_DIR="/build/reproducible-path/votca-2022.1" -DGIT_EXECUTABLE="" -P /build/reproducible-path/votca-2022.1/csg/CMakeModules/gitversion.cmake make -f tools/scripts/CMakeFiles/votca_help2doc_build.dir/build.make tools/scripts/CMakeFiles/votca_help2doc_build.dir/build -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f csg/share/man/CMakeFiles/votca_csg_manpages.dir/build.make csg/share/man/CMakeFiles/votca_csg_manpages.dir/depend make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make -f tools/scripts/CMakeFiles/votca_compare_build.dir/build.make tools/scripts/CMakeFiles/votca_compare_build.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/share/man /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/man /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/man/CMakeFiles/votca_csg_manpages.dir/DependInfo.cmake --color= +make -f tools/share/man/CMakeFiles/votca_tools_manpages.dir/build.make tools/share/man/CMakeFiles/votca_tools_manpages.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f tools/share/man/CMakeFiles/votca_tools_manpages.dir/build.make tools/share/man/CMakeFiles/votca_tools_manpages.dir/build -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/tools/share/man /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/share/man /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/share/man/CMakeFiles/votca_tools_manpages.dir/DependInfo.cmake --color= +make -f csg/share/man/CMakeFiles/votca_csg_manpages.dir/build.make csg/share/man/CMakeFiles/votca_csg_manpages.dir/depend [ 0%] Generating votca_help2doc -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts && /usr/bin/cmake -DINPUT="votca_help2doc.tmp.out" -DOUTPUT="votca_help2doc" -DGIT_EXECUTABLE="" -DTOP_SOURCE_DIR="/build/reproducible-path/votca-2022.1" -P /build/reproducible-path/votca-2022.1/tools/CMakeModules/gitscript.cmake make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[4]: Nothing to be done for 'tools/share/man/CMakeFiles/votca_tools_manpages.dir/build'. -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/share/man /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/man /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/man/CMakeFiles/votca_csg_manpages.dir/DependInfo.cmake --color= +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts && /usr/bin/cmake -DINPUT="votca_help2doc.tmp.out" -DOUTPUT="votca_help2doc" -DGIT_EXECUTABLE="" -DTOP_SOURCE_DIR="/build/reproducible-path/votca-2022.1" -P /build/reproducible-path/votca-2022.1/tools/CMakeModules/gitscript.cmake make -f xtp/scripts/CMakeFiles/xtp_basisset_build.dir/build.make xtp/scripts/CMakeFiles/xtp_basisset_build.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f csg/share/man/CMakeFiles/votca_csg_manpages.dir/build.make csg/share/man/CMakeFiles/votca_csg_manpages.dir/build cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/scripts /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/scripts /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/scripts/CMakeFiles/xtp_basisset_build.dir/DependInfo.cmake --color= -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[4]: Nothing to be done for 'csg/share/man/CMakeFiles/votca_csg_manpages.dir/build'. -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' [ 0%] Generating votca_compare -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts && /usr/bin/cmake -DINPUT="votca_compare.tmp.out" -DOUTPUT="votca_compare" -DGIT_EXECUTABLE="" -DTOP_SOURCE_DIR="/build/reproducible-path/votca-2022.1" -P /build/reproducible-path/votca-2022.1/tools/CMakeModules/gitscript.cmake -[ 0%] Built target gitversion-xtp make -f xtp/scripts/CMakeFiles/xtp_update_mapfile_build.dir/build.make xtp/scripts/CMakeFiles/xtp_update_mapfile_build.dir/depend -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts && /usr/bin/cmake -DINPUT="votca_compare.tmp.out" -DOUTPUT="votca_compare" -DGIT_EXECUTABLE="" -DTOP_SOURCE_DIR="/build/reproducible-path/votca-2022.1" -P /build/reproducible-path/votca-2022.1/tools/CMakeModules/gitscript.cmake make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/scripts /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/scripts /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/scripts/CMakeFiles/xtp_update_mapfile_build.dir/DependInfo.cmake --color= make -f xtp/scripts/CMakeFiles/xtp_modify_jobfile_build.dir/build.make xtp/scripts/CMakeFiles/xtp_modify_jobfile_build.dir/depend -[ 0%] Built target votca_tools_manpages make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/scripts/CMakeFiles/xtp_basisset_build.dir/build.make xtp/scripts/CMakeFiles/xtp_basisset_build.dir/build +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/scripts /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/scripts /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/scripts/CMakeFiles/xtp_modify_jobfile_build.dir/DependInfo.cmake --color= -[ 0%] Built target gitversion -[ 0%] Built target votca_csg_manpages -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/scripts/CMakeFiles/xtp_autogen_mapping_build.dir/build.make xtp/scripts/CMakeFiles/xtp_autogen_mapping_build.dir/depend -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/scripts /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/scripts /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/scripts/CMakeFiles/xtp_autogen_mapping_build.dir/DependInfo.cmake --color= -make -f xtp/scripts/CMakeFiles/xtp_qmmm2qm_build.dir/build.make xtp/scripts/CMakeFiles/xtp_qmmm2qm_build.dir/depend +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f tools/share/man/CMakeFiles/votca_tools_manpages.dir/build.make tools/share/man/CMakeFiles/votca_tools_manpages.dir/build +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/scripts /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/scripts /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/scripts/CMakeFiles/xtp_qmmm2qm_build.dir/DependInfo.cmake --color= -make -f csg/scripts/CMakeFiles/csg_call_build.dir/build.make csg/scripts/CMakeFiles/csg_call_build.dir/depend +make[4]: Nothing to be done for 'tools/share/man/CMakeFiles/votca_tools_manpages.dir/build'. make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 0%] Generating xtp_basisset +[ 0%] Built target gitversion-xtp +make -f csg/share/man/CMakeFiles/votca_csg_manpages.dir/build.make csg/share/man/CMakeFiles/votca_csg_manpages.dir/build make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/scripts && /usr/bin/cmake -DINPUT="xtp_basisset.in2" -DOUTPUT="xtp_basisset" -DGIT_EXECUTABLE="" -DTOP_SOURCE_DIR="/build/reproducible-path/votca-2022.1" -P /build/reproducible-path/votca-2022.1/xtp/CMakeModules/gitscript.cmake -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/scripts /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/CMakeFiles/csg_call_build.dir/DependInfo.cmake --color= +make[4]: Nothing to be done for 'csg/share/man/CMakeFiles/votca_csg_manpages.dir/build'. make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/scripts/CMakeFiles/xtp_update_mapfile_build.dir/build.make xtp/scripts/CMakeFiles/xtp_update_mapfile_build.dir/build +make -f xtp/scripts/CMakeFiles/xtp_basisset_build.dir/build.make xtp/scripts/CMakeFiles/xtp_basisset_build.dir/build make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 0%] Built target gitversion +make -f xtp/scripts/CMakeFiles/xtp_update_mapfile_build.dir/build.make xtp/scripts/CMakeFiles/xtp_update_mapfile_build.dir/build +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f xtp/scripts/CMakeFiles/xtp_modify_jobfile_build.dir/build.make xtp/scripts/CMakeFiles/xtp_modify_jobfile_build.dir/build +[ 0%] Generating xtp_basisset +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/scripts && /usr/bin/cmake -DINPUT="xtp_basisset.in2" -DOUTPUT="xtp_basisset" -DGIT_EXECUTABLE="" -DTOP_SOURCE_DIR="/build/reproducible-path/votca-2022.1" -P /build/reproducible-path/votca-2022.1/xtp/CMakeModules/gitscript.cmake +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' [ 0%] Built target gitversion-csg +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 0%] Generating xtp_update_mapfile +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/scripts && /usr/bin/cmake -DINPUT="xtp_update_mapfile.in2" -DOUTPUT="xtp_update_mapfile" -DGIT_EXECUTABLE="" -DTOP_SOURCE_DIR="/build/reproducible-path/votca-2022.1" -P /build/reproducible-path/votca-2022.1/xtp/CMakeModules/gitscript.cmake +[ 0%] Generating xtp_modify_jobfile +make -f xtp/scripts/CMakeFiles/xtp_autogen_mapping_build.dir/build.make xtp/scripts/CMakeFiles/xtp_autogen_mapping_build.dir/depend +[ 0%] Built target votca_tools_manpages +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/scripts && /usr/bin/cmake -DINPUT="xtp_modify_jobfile.in2" -DOUTPUT="xtp_modify_jobfile" -DGIT_EXECUTABLE="" -DTOP_SOURCE_DIR="/build/reproducible-path/votca-2022.1" -P /build/reproducible-path/votca-2022.1/xtp/CMakeModules/gitscript.cmake +[ 0%] Built target votca_help2doc_build make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/scripts /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/scripts /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/scripts/CMakeFiles/xtp_autogen_mapping_build.dir/DependInfo.cmake --color= +make -f xtp/scripts/CMakeFiles/xtp_qmmm2qm_build.dir/build.make xtp/scripts/CMakeFiles/xtp_qmmm2qm_build.dir/depend make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/scripts/CMakeFiles/xtp_modify_jobfile_build.dir/build.make xtp/scripts/CMakeFiles/xtp_modify_jobfile_build.dir/build -make -f xtp/scripts/CMakeFiles/xtp_autogen_mapping_build.dir/build.make xtp/scripts/CMakeFiles/xtp_autogen_mapping_build.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/scripts /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/scripts /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/scripts/CMakeFiles/xtp_qmmm2qm_build.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 0%] Built target votca_csg_manpages +make -f xtp/scripts/CMakeFiles/xtp_autogen_mapping_build.dir/build.make xtp/scripts/CMakeFiles/xtp_autogen_mapping_build.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/scripts/CMakeFiles/xtp_qmmm2qm_build.dir/build.make xtp/scripts/CMakeFiles/xtp_qmmm2qm_build.dir/build -[ 0%] Generating xtp_update_mapfile +make -f csg/scripts/CMakeFiles/csg_call_build.dir/build.make csg/scripts/CMakeFiles/csg_call_build.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/scripts /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/CMakeFiles/csg_call_build.dir/DependInfo.cmake --color= make -f csg/scripts/CMakeFiles/csg_inverse_build.dir/build.make csg/scripts/CMakeFiles/csg_inverse_build.dir/depend -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/scripts && /usr/bin/cmake -DINPUT="xtp_update_mapfile.in2" -DOUTPUT="xtp_update_mapfile" -DGIT_EXECUTABLE="" -DTOP_SOURCE_DIR="/build/reproducible-path/votca-2022.1" -P /build/reproducible-path/votca-2022.1/xtp/CMakeModules/gitscript.cmake -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/share/benchmark/CMakeFiles/xtp_benchmark_build.dir/build.make xtp/share/benchmark/CMakeFiles/xtp_benchmark_build.dir/depend +[ 0%] Built target votca_compare_build make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/scripts /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/CMakeFiles/csg_inverse_build.dir/DependInfo.cmake --color= +make -f xtp/share/benchmark/CMakeFiles/xtp_benchmark_build.dir/build.make xtp/share/benchmark/CMakeFiles/xtp_benchmark_build.dir/depend make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/share/benchmark /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/share/benchmark /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/share/benchmark/CMakeFiles/xtp_benchmark_build.dir/DependInfo.cmake --color= +make -f xtp/scripts/CMakeFiles/xtp_qmmm2qm_build.dir/build.make xtp/scripts/CMakeFiles/xtp_qmmm2qm_build.dir/build [ 0%] Generating xtp_autogen_mapping cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/scripts && /usr/bin/cmake -DINPUT="xtp_autogen_mapping.in2" -DOUTPUT="xtp_autogen_mapping" -DGIT_EXECUTABLE="" -DTOP_SOURCE_DIR="/build/reproducible-path/votca-2022.1" -P /build/reproducible-path/votca-2022.1/xtp/CMakeModules/gitscript.cmake -make -f csg/scripts/CMakeFiles/csg_call_build.dir/build.make csg/scripts/CMakeFiles/csg_call_build.dir/build -[ 0%] Generating xtp_modify_jobfile -[ 0%] Built target votca_compare_build -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f tools/src/libtools/CMakeFiles/votca_tools.dir/build.make tools/src/libtools/CMakeFiles/votca_tools.dir/depend -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/scripts && /usr/bin/cmake -DINPUT="xtp_modify_jobfile.in2" -DOUTPUT="xtp_modify_jobfile" -DGIT_EXECUTABLE="" -DTOP_SOURCE_DIR="/build/reproducible-path/votca-2022.1" -P /build/reproducible-path/votca-2022.1/xtp/CMakeModules/gitscript.cmake make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/tools/src/libtools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools/CMakeFiles/votca_tools.dir/DependInfo.cmake --color= -[ 0%] Generating xtp_qmmm2qm -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/scripts && /usr/bin/cmake -DINPUT="xtp_qmmm2qm.in2" -DOUTPUT="xtp_qmmm2qm" -DGIT_EXECUTABLE="" -DTOP_SOURCE_DIR="/build/reproducible-path/votca-2022.1" -P /build/reproducible-path/votca-2022.1/xtp/CMakeModules/gitscript.cmake make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 0%] Built target votca_help2doc_build make -f csg/scripts/CMakeFiles/csg_inverse_build.dir/build.make csg/scripts/CMakeFiles/csg_inverse_build.dir/build -[ 0%] Generating csg_call make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -DINPUT="csg_call.in2" -DOUTPUT="csg_call" -DGIT_EXECUTABLE="" -DTOP_SOURCE_DIR="/build/reproducible-path/votca-2022.1" -P /build/reproducible-path/votca-2022.1/csg/CMakeModules/gitscript.cmake make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/share/benchmark/CMakeFiles/xtp_benchmark_build.dir/build.make xtp/share/benchmark/CMakeFiles/xtp_benchmark_build.dir/build -make -f tools/src/libtools/CMakeFiles/votca_tools.dir/build.make tools/src/libtools/CMakeFiles/votca_tools.dir/build -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f csg/scripts/CMakeFiles/csg_call_build.dir/build.make csg/scripts/CMakeFiles/csg_call_build.dir/build +[ 0%] Generating xtp_qmmm2qm +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/scripts && /usr/bin/cmake -DINPUT="xtp_qmmm2qm.in2" -DOUTPUT="xtp_qmmm2qm" -DGIT_EXECUTABLE="" -DTOP_SOURCE_DIR="/build/reproducible-path/votca-2022.1" -P /build/reproducible-path/votca-2022.1/xtp/CMakeModules/gitscript.cmake [ 1%] Generating csg_inverse cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -DINPUT="csg_inverse.in2" -DOUTPUT="csg_inverse" -DGIT_EXECUTABLE="" -DTOP_SOURCE_DIR="/build/reproducible-path/votca-2022.1" -P /build/reproducible-path/votca-2022.1/csg/CMakeModules/gitscript.cmake +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 1%] Built target xtp_basisset_build +make -f xtp/share/benchmark/CMakeFiles/xtp_benchmark_build.dir/build.make xtp/share/benchmark/CMakeFiles/xtp_benchmark_build.dir/build +[ 1%] Generating csg_call +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -DINPUT="csg_call.in2" -DOUTPUT="csg_call" -DGIT_EXECUTABLE="" -DTOP_SOURCE_DIR="/build/reproducible-path/votca-2022.1" -P /build/reproducible-path/votca-2022.1/csg/CMakeModules/gitscript.cmake +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f tools/src/libtools/CMakeFiles/votca_tools.dir/build.make tools/src/libtools/CMakeFiles/votca_tools.dir/depend +[ 1%] Built target xtp_update_mapfile_build +[ 1%] Built target xtp_modify_jobfile_build make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/tools/src/libtools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools/CMakeFiles/votca_tools.dir/DependInfo.cmake --color= make -f tools/scripts/CMakeFiles/votca_compare_manpage.dir/build.make tools/scripts/CMakeFiles/votca_compare_manpage.dir/depend -[ 1%] Generating xtp_benchmark -make -f tools/scripts/CMakeFiles/votca_help2doc_manpage.dir/build.make tools/scripts/CMakeFiles/votca_help2doc_manpage.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/share/benchmark && /usr/bin/cmake -DINPUT="xtp_benchmark.out" -DOUTPUT="xtp_benchmark" -DGIT_EXECUTABLE="" -DTOP_SOURCE_DIR="/build/reproducible-path/votca-2022.1" -P /build/reproducible-path/votca-2022.1/xtp/CMakeModules/gitscript.cmake cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/tools/scripts /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/CMakeFiles/votca_compare_manpage.dir/DependInfo.cmake --color= +make -f tools/scripts/CMakeFiles/votca_help2doc_manpage.dir/build.make tools/scripts/CMakeFiles/votca_help2doc_manpage.dir/depend +[ 1%] Generating xtp_benchmark +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/share/benchmark && /usr/bin/cmake -DINPUT="xtp_benchmark.out" -DOUTPUT="xtp_benchmark" -DGIT_EXECUTABLE="" -DTOP_SOURCE_DIR="/build/reproducible-path/votca-2022.1" -P /build/reproducible-path/votca-2022.1/xtp/CMakeModules/gitscript.cmake make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/tools/scripts /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/CMakeFiles/votca_help2doc_manpage.dir/DependInfo.cmake --color= -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make -f csg/scripts/CMakeFiles/csg_call_manpage.dir/build.make csg/scripts/CMakeFiles/csg_call_manpage.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/scripts /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/CMakeFiles/csg_call_manpage.dir/DependInfo.cmake --color= -[ 1%] Building CXX object tools/src/libtools/CMakeFiles/votca_tools.dir/akimaspline.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -Dvotca_tools_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT tools/src/libtools/CMakeFiles/votca_tools.dir/akimaspline.cc.o -MF CMakeFiles/votca_tools.dir/akimaspline.cc.o.d -o CMakeFiles/votca_tools.dir/akimaspline.cc.o -c /build/reproducible-path/votca-2022.1/tools/src/libtools/akimaspline.cc +make -f csg/scripts/CMakeFiles/csg_inverse_manpage.dir/build.make csg/scripts/CMakeFiles/csg_inverse_manpage.dir/depend +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/scripts /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/CMakeFiles/csg_inverse_manpage.dir/DependInfo.cmake --color= +make -f xtp/scripts/CMakeFiles/xtp_basisset_manpage.dir/build.make xtp/scripts/CMakeFiles/xtp_basisset_manpage.dir/depend +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/scripts /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/scripts /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/scripts/CMakeFiles/xtp_basisset_manpage.dir/DependInfo.cmake --color= +make -f tools/src/libtools/CMakeFiles/votca_tools.dir/build.make tools/src/libtools/CMakeFiles/votca_tools.dir/build +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make -f tools/scripts/CMakeFiles/votca_compare_manpage.dir/build.make tools/scripts/CMakeFiles/votca_compare_manpage.dir/build -[ 1%] Building CXX object tools/src/libtools/CMakeFiles/votca_tools.dir/application.cc.o make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -Dvotca_tools_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT tools/src/libtools/CMakeFiles/votca_tools.dir/application.cc.o -MF CMakeFiles/votca_tools.dir/application.cc.o.d -o CMakeFiles/votca_tools.dir/application.cc.o -c /build/reproducible-path/votca-2022.1/tools/src/libtools/application.cc -[ 1%] Building CXX object tools/src/libtools/CMakeFiles/votca_tools.dir/calculator.cc.o -[ 1%] Building CXX object tools/src/libtools/CMakeFiles/votca_tools.dir/colors.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -Dvotca_tools_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT tools/src/libtools/CMakeFiles/votca_tools.dir/calculator.cc.o -MF CMakeFiles/votca_tools.dir/calculator.cc.o.d -o CMakeFiles/votca_tools.dir/calculator.cc.o -c /build/reproducible-path/votca-2022.1/tools/src/libtools/calculator.cc -[ 1%] Built target xtp_basisset_build make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 1%] Built target xtp_autogen_mapping_build +[ 1%] Building CXX object tools/src/libtools/CMakeFiles/votca_tools.dir/akimaspline.cc.o +[ 1%] Built target csg_call_build make -f tools/scripts/CMakeFiles/votca_help2doc_manpage.dir/build.make tools/scripts/CMakeFiles/votca_help2doc_manpage.dir/build -[ 1%] Building CXX object tools/src/libtools/CMakeFiles/votca_tools.dir/correlate.cc.o +[ 1%] Built target xtp_qmmm2qm_build +[ 1%] Building CXX object tools/src/libtools/CMakeFiles/votca_tools.dir/application.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -Dvotca_tools_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT tools/src/libtools/CMakeFiles/votca_tools.dir/akimaspline.cc.o -MF CMakeFiles/votca_tools.dir/akimaspline.cc.o.d -o CMakeFiles/votca_tools.dir/akimaspline.cc.o -c /build/reproducible-path/votca-2022.1/tools/src/libtools/akimaspline.cc make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make -f csg/scripts/CMakeFiles/csg_call_manpage.dir/build.make csg/scripts/CMakeFiles/csg_call_manpage.dir/build -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -Dvotca_tools_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT tools/src/libtools/CMakeFiles/votca_tools.dir/colors.cc.o -MF CMakeFiles/votca_tools.dir/colors.cc.o.d -o CMakeFiles/votca_tools.dir/colors.cc.o -c /build/reproducible-path/votca-2022.1/tools/src/libtools/colors.cc -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -Dvotca_tools_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT tools/src/libtools/CMakeFiles/votca_tools.dir/correlate.cc.o -MF CMakeFiles/votca_tools.dir/correlate.cc.o.d -o CMakeFiles/votca_tools.dir/correlate.cc.o -c /build/reproducible-path/votca-2022.1/tools/src/libtools/correlate.cc -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f csg/scripts/CMakeFiles/csg_inverse_manpage.dir/build.make csg/scripts/CMakeFiles/csg_inverse_manpage.dir/depend -[ 1%] Built target xtp_update_mapfile_build -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/scripts/CMakeFiles/xtp_basisset_manpage.dir/build.make xtp/scripts/CMakeFiles/xtp_basisset_manpage.dir/depend +[ 1%] Building CXX object tools/src/libtools/CMakeFiles/votca_tools.dir/calculator.cc.o make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f csg/scripts/CMakeFiles/csg_inverse_manpage.dir/build.make csg/scripts/CMakeFiles/csg_inverse_manpage.dir/build +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -Dvotca_tools_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT tools/src/libtools/CMakeFiles/votca_tools.dir/application.cc.o -MF CMakeFiles/votca_tools.dir/application.cc.o.d -o CMakeFiles/votca_tools.dir/application.cc.o -c /build/reproducible-path/votca-2022.1/tools/src/libtools/application.cc [ 1%] Building votca_compare manpage -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/scripts /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/CMakeFiles/csg_inverse_manpage.dir/DependInfo.cmake --color= +[ 1%] Built target csg_inverse_build cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts && ./votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_compare --format groff --out votca_compare.man +[ 1%] Building CXX object tools/src/libtools/CMakeFiles/votca_tools.dir/colors.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -Dvotca_tools_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT tools/src/libtools/CMakeFiles/votca_tools.dir/calculator.cc.o -MF CMakeFiles/votca_tools.dir/calculator.cc.o.d -o CMakeFiles/votca_tools.dir/calculator.cc.o -c /build/reproducible-path/votca-2022.1/tools/src/libtools/calculator.cc make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/scripts /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/scripts /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/scripts/CMakeFiles/xtp_basisset_manpage.dir/DependInfo.cmake --color= -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 1%] Built target csg_call_build -[ 1%] Building csg_call manpage -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call --format groff --out csg_call.man -make -f xtp/scripts/CMakeFiles/xtp_update_mapfile_manpage.dir/build.make xtp/scripts/CMakeFiles/xtp_update_mapfile_manpage.dir/depend +make -f xtp/scripts/CMakeFiles/xtp_basisset_manpage.dir/build.make xtp/scripts/CMakeFiles/xtp_basisset_manpage.dir/build [ 1%] Building votca_help2doc manpage -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/scripts /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/scripts /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/scripts/CMakeFiles/xtp_update_mapfile_manpage.dir/DependInfo.cmake --color= -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts && ./votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --format groff --out votca_help2doc.man -[ 1%] Built target xtp_autogen_mapping_build -[ 1%] Built target xtp_modify_jobfile_build -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/scripts/CMakeFiles/xtp_basisset_manpage.dir/build.make xtp/scripts/CMakeFiles/xtp_basisset_manpage.dir/build +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -Dvotca_tools_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT tools/src/libtools/CMakeFiles/votca_tools.dir/colors.cc.o -MF CMakeFiles/votca_tools.dir/colors.cc.o.d -o CMakeFiles/votca_tools.dir/colors.cc.o -c /build/reproducible-path/votca-2022.1/tools/src/libtools/colors.cc +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f xtp/scripts/CMakeFiles/xtp_update_mapfile_manpage.dir/build.make xtp/scripts/CMakeFiles/xtp_update_mapfile_manpage.dir/depend +[ 1%] Building csg_call manpage +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call --format groff --out csg_call.man make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/scripts /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/scripts /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/scripts/CMakeFiles/xtp_update_mapfile_manpage.dir/DependInfo.cmake --color= make -f xtp/scripts/CMakeFiles/xtp_modify_jobfile_manpage.dir/build.make xtp/scripts/CMakeFiles/xtp_modify_jobfile_manpage.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/scripts /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/scripts /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/scripts/CMakeFiles/xtp_modify_jobfile_manpage.dir/DependInfo.cmake --color= -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f csg/scripts/CMakeFiles/csg_inverse_manpage.dir/build.make csg/scripts/CMakeFiles/csg_inverse_manpage.dir/build -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 1%] Built target xtp_qmmm2qm_build make -f xtp/scripts/CMakeFiles/xtp_autogen_mapping_manpage.dir/build.make xtp/scripts/CMakeFiles/xtp_autogen_mapping_manpage.dir/depend -[ 1%] Built target csg_inverse_build -[ 1%] Built target xtp_benchmark_build make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 1%] Building csg_inverse manpage +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_inverse --format groff --out csg_inverse.man make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/scripts /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/scripts /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/scripts/CMakeFiles/xtp_autogen_mapping_manpage.dir/DependInfo.cmake --color= -make -f xtp/scripts/CMakeFiles/xtp_update_mapfile_manpage.dir/build.make xtp/scripts/CMakeFiles/xtp_update_mapfile_manpage.dir/build +[ 1%] Building xtp_basisset manpage +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/scripts && ../../tools/scripts/votca_help2doc --name xtp_basisset --format groff --out xtp_basisset.man +[ 1%] Building CXX object tools/src/libtools/CMakeFiles/votca_tools.dir/correlate.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -Dvotca_tools_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT tools/src/libtools/CMakeFiles/votca_tools.dir/correlate.cc.o -MF CMakeFiles/votca_tools.dir/correlate.cc.o.d -o CMakeFiles/votca_tools.dir/correlate.cc.o -c /build/reproducible-path/votca-2022.1/tools/src/libtools/correlate.cc make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f xtp/scripts/CMakeFiles/xtp_update_mapfile_manpage.dir/build.make xtp/scripts/CMakeFiles/xtp_update_mapfile_manpage.dir/build +[ 1%] Built target xtp_benchmark_build +[ 1%] Building CXX object tools/src/libtools/CMakeFiles/votca_tools.dir/crosscorrelate.cc.o make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -Dvotca_tools_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT tools/src/libtools/CMakeFiles/votca_tools.dir/crosscorrelate.cc.o -MF CMakeFiles/votca_tools.dir/crosscorrelate.cc.o.d -o CMakeFiles/votca_tools.dir/crosscorrelate.cc.o -c /build/reproducible-path/votca-2022.1/tools/src/libtools/crosscorrelate.cc +make -f xtp/scripts/CMakeFiles/xtp_qmmm2qm_manpage.dir/build.make xtp/scripts/CMakeFiles/xtp_qmmm2qm_manpage.dir/depend +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/scripts /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/scripts /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/scripts/CMakeFiles/xtp_qmmm2qm_manpage.dir/DependInfo.cmake --color= make -f xtp/scripts/CMakeFiles/xtp_modify_jobfile_manpage.dir/build.make xtp/scripts/CMakeFiles/xtp_modify_jobfile_manpage.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 1%] Building csg_inverse manpage make -f xtp/scripts/CMakeFiles/xtp_autogen_mapping_manpage.dir/build.make xtp/scripts/CMakeFiles/xtp_autogen_mapping_manpage.dir/build -[ 1%] Building xtp_basisset manpage -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_inverse --format groff --out csg_inverse.man -[ 1%] Building CXX object tools/src/libtools/CMakeFiles/votca_tools.dir/crosscorrelate.cc.o -[ 1%] Building CXX object tools/src/libtools/CMakeFiles/votca_tools.dir/cubicspline.cc.o make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/scripts && ../../tools/scripts/votca_help2doc --name xtp_basisset --format groff --out xtp_basisset.man -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -Dvotca_tools_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT tools/src/libtools/CMakeFiles/votca_tools.dir/crosscorrelate.cc.o -MF CMakeFiles/votca_tools.dir/crosscorrelate.cc.o.d -o CMakeFiles/votca_tools.dir/crosscorrelate.cc.o -c /build/reproducible-path/votca-2022.1/tools/src/libtools/crosscorrelate.cc [ 2%] Building xtp_update_mapfile manpage -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -Dvotca_tools_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT tools/src/libtools/CMakeFiles/votca_tools.dir/cubicspline.cc.o -MF CMakeFiles/votca_tools.dir/cubicspline.cc.o.d -o CMakeFiles/votca_tools.dir/cubicspline.cc.o -c /build/reproducible-path/votca-2022.1/tools/src/libtools/cubicspline.cc cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/scripts && ../../tools/scripts/votca_help2doc --name xtp_update_mapfile --format groff --out xtp_update_mapfile.man -[ 2%] Building xtp_autogen_mapping manpage -[ 4%] Building CXX object tools/src/libtools/CMakeFiles/votca_tools.dir/datacollection.cc.o -[ 4%] Building xtp_modify_jobfile manpage -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -Dvotca_tools_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT tools/src/libtools/CMakeFiles/votca_tools.dir/datacollection.cc.o -MF CMakeFiles/votca_tools.dir/datacollection.cc.o.d -o CMakeFiles/votca_tools.dir/datacollection.cc.o -c /build/reproducible-path/votca-2022.1/tools/src/libtools/datacollection.cc -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/scripts && ../../tools/scripts/votca_help2doc --name xtp_autogen_mapping --format groff --out xtp_autogen_mapping.man -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/scripts && ../../tools/scripts/votca_help2doc --name xtp_modify_jobfile --format groff --out xtp_modify_jobfile.man -[ 4%] Building CXX object tools/src/libtools/CMakeFiles/votca_tools.dir/edge.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -Dvotca_tools_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT tools/src/libtools/CMakeFiles/votca_tools.dir/edge.cc.o -MF CMakeFiles/votca_tools.dir/edge.cc.o.d -o CMakeFiles/votca_tools.dir/edge.cc.o -c /build/reproducible-path/votca-2022.1/tools/src/libtools/edge.cc -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 5%] Built target votca_compare_manpage -make -f xtp/scripts/CMakeFiles/xtp_qmmm2qm_manpage.dir/build.make xtp/scripts/CMakeFiles/xtp_qmmm2qm_manpage.dir/depend make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f xtp/scripts/CMakeFiles/xtp_qmmm2qm_manpage.dir/build.make xtp/scripts/CMakeFiles/xtp_qmmm2qm_manpage.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/scripts /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/scripts /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/scripts/CMakeFiles/xtp_qmmm2qm_manpage.dir/DependInfo.cmake --color= -[ 5%] Built target csg_call_manpage +[ 2%] Building xtp_modify_jobfile manpage +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/scripts && ../../tools/scripts/votca_help2doc --name xtp_modify_jobfile --format groff --out xtp_modify_jobfile.man +[ 2%] Building xtp_autogen_mapping manpage +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/scripts && ../../tools/scripts/votca_help2doc --name xtp_autogen_mapping --format groff --out xtp_autogen_mapping.man +[ 4%] Building xtp_qmmm2qm manpage +[ 4%] Building CXX object tools/src/libtools/CMakeFiles/votca_tools.dir/cubicspline.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -Dvotca_tools_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT tools/src/libtools/CMakeFiles/votca_tools.dir/cubicspline.cc.o -MF CMakeFiles/votca_tools.dir/cubicspline.cc.o.d -o CMakeFiles/votca_tools.dir/cubicspline.cc.o -c /build/reproducible-path/votca-2022.1/tools/src/libtools/cubicspline.cc +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/scripts && ../../tools/scripts/votca_help2doc --name xtp_qmmm2qm --format groff --out xtp_qmmm2qm.man make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/scripts/CMakeFiles/xtp_qmmm2qm_manpage.dir/build.make xtp/scripts/CMakeFiles/xtp_qmmm2qm_manpage.dir/build make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 6%] Building xtp_qmmm2qm manpage -[ 6%] Built target votca_help2doc_manpage -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/scripts && ../../tools/scripts/votca_help2doc --name xtp_qmmm2qm --format groff --out xtp_qmmm2qm.man +[ 4%] Built target csg_call_manpage make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 4%] Built target votca_help2doc_manpage +[ 5%] Built target votca_compare_manpage +[ 6%] Building CXX object tools/src/libtools/CMakeFiles/votca_tools.dir/datacollection.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -Dvotca_tools_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT tools/src/libtools/CMakeFiles/votca_tools.dir/datacollection.cc.o -MF CMakeFiles/votca_tools.dir/datacollection.cc.o.d -o CMakeFiles/votca_tools.dir/datacollection.cc.o -c /build/reproducible-path/votca-2022.1/tools/src/libtools/datacollection.cc +[ 6%] Built target csg_inverse_manpage +[ 6%] Building CXX object tools/src/libtools/CMakeFiles/votca_tools.dir/edge.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -Dvotca_tools_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT tools/src/libtools/CMakeFiles/votca_tools.dir/edge.cc.o -MF CMakeFiles/votca_tools.dir/edge.cc.o.d -o CMakeFiles/votca_tools.dir/edge.cc.o -c /build/reproducible-path/votca-2022.1/tools/src/libtools/edge.cc [ 6%] Building CXX object tools/src/libtools/CMakeFiles/votca_tools.dir/edgecontainer.cc.o cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -Dvotca_tools_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT tools/src/libtools/CMakeFiles/votca_tools.dir/edgecontainer.cc.o -MF CMakeFiles/votca_tools.dir/edgecontainer.cc.o.d -o CMakeFiles/votca_tools.dir/edgecontainer.cc.o -c /build/reproducible-path/votca-2022.1/tools/src/libtools/edgecontainer.cc -[ 6%] Built target xtp_update_mapfile_manpage -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 6%] Built target csg_inverse_manpage [ 6%] Building CXX object tools/src/libtools/CMakeFiles/votca_tools.dir/eigenio_matrixmarket.cc.o cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -Dvotca_tools_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT tools/src/libtools/CMakeFiles/votca_tools.dir/eigenio_matrixmarket.cc.o -MF CMakeFiles/votca_tools.dir/eigenio_matrixmarket.cc.o.d -o CMakeFiles/votca_tools.dir/eigenio_matrixmarket.cc.o -c /build/reproducible-path/votca-2022.1/tools/src/libtools/eigenio_matrixmarket.cc +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' [ 6%] Built target xtp_basisset_manpage +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' [ 6%] Building CXX object tools/src/libtools/CMakeFiles/votca_tools.dir/elements.cc.o cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -Dvotca_tools_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT tools/src/libtools/CMakeFiles/votca_tools.dir/elements.cc.o -MF CMakeFiles/votca_tools.dir/elements.cc.o.d -o CMakeFiles/votca_tools.dir/elements.cc.o -c /build/reproducible-path/votca-2022.1/tools/src/libtools/elements.cc +[ 6%] Built target xtp_update_mapfile_manpage +[ 6%] Built target xtp_modify_jobfile_manpage [ 6%] Building CXX object tools/src/libtools/CMakeFiles/votca_tools.dir/filesystem.cc.o -[ 6%] Building CXX object tools/src/libtools/CMakeFiles/votca_tools.dir/globals.cc.o cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -Dvotca_tools_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT tools/src/libtools/CMakeFiles/votca_tools.dir/filesystem.cc.o -MF CMakeFiles/votca_tools.dir/filesystem.cc.o.d -o CMakeFiles/votca_tools.dir/filesystem.cc.o -c /build/reproducible-path/votca-2022.1/tools/src/libtools/filesystem.cc +[ 6%] Building CXX object tools/src/libtools/CMakeFiles/votca_tools.dir/globals.cc.o cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -Dvotca_tools_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT tools/src/libtools/CMakeFiles/votca_tools.dir/globals.cc.o -MF CMakeFiles/votca_tools.dir/globals.cc.o.d -o CMakeFiles/votca_tools.dir/globals.cc.o -c /build/reproducible-path/votca-2022.1/tools/src/libtools/globals.cc make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 6%] Built target xtp_modify_jobfile_manpage +[ 6%] Built target xtp_qmmm2qm_manpage [ 6%] Building CXX object tools/src/libtools/CMakeFiles/votca_tools.dir/graph.cc.o cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -Dvotca_tools_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT tools/src/libtools/CMakeFiles/votca_tools.dir/graph.cc.o -MF CMakeFiles/votca_tools.dir/graph.cc.o.d -o CMakeFiles/votca_tools.dir/graph.cc.o -c /build/reproducible-path/votca-2022.1/tools/src/libtools/graph.cc make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' [ 6%] Built target xtp_autogen_mapping_manpage [ 8%] Building CXX object tools/src/libtools/CMakeFiles/votca_tools.dir/graph_bf_visitor.cc.o cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -Dvotca_tools_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT tools/src/libtools/CMakeFiles/votca_tools.dir/graph_bf_visitor.cc.o -MF CMakeFiles/votca_tools.dir/graph_bf_visitor.cc.o.d -o CMakeFiles/votca_tools.dir/graph_bf_visitor.cc.o -c /build/reproducible-path/votca-2022.1/tools/src/libtools/graph_bf_visitor.cc -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 8%] Built target xtp_qmmm2qm_manpage [ 8%] Building CXX object tools/src/libtools/CMakeFiles/votca_tools.dir/graph_df_visitor.cc.o cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -Dvotca_tools_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT tools/src/libtools/CMakeFiles/votca_tools.dir/graph_df_visitor.cc.o -MF CMakeFiles/votca_tools.dir/graph_df_visitor.cc.o.d -o CMakeFiles/votca_tools.dir/graph_df_visitor.cc.o -c /build/reproducible-path/votca-2022.1/tools/src/libtools/graph_df_visitor.cc [ 8%] Building CXX object tools/src/libtools/CMakeFiles/votca_tools.dir/graphalgorithm.cc.o @@ -3223,104 +3259,111 @@ cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_calculator.dir/DependInfo.cmake --color= make -f tools/src/tests/CMakeFiles/unit_test_constants.dir/build.make tools/src/tests/CMakeFiles/unit_test_constants.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f tools/src/tests/CMakeFiles/unit_test_correlate.dir/build.make tools/src/tests/CMakeFiles/unit_test_correlate.dir/depend cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_constants.dir/DependInfo.cmake --color= -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f tools/src/tests/CMakeFiles/unit_test_correlate.dir/build.make tools/src/tests/CMakeFiles/unit_test_correlate.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_correlate.dir/DependInfo.cmake --color= -make -f tools/src/tools/CMakeFiles/votca_property.dir/build.make tools/src/tools/CMakeFiles/votca_property.dir/build -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f tools/src/tests/CMakeFiles/unit_test_crosscorrelate.dir/build.make tools/src/tests/CMakeFiles/unit_test_crosscorrelate.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f tools/src/tests/CMakeFiles/unit_test_calculator.dir/build.make tools/src/tests/CMakeFiles/unit_test_calculator.dir/build +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_crosscorrelate.dir/DependInfo.cmake --color= +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f tools/src/tests/CMakeFiles/unit_test_cubicspline.dir/build.make tools/src/tests/CMakeFiles/unit_test_cubicspline.dir/depend make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_cubicspline.dir/DependInfo.cmake --color= make -f csg/src/libcsg/CMakeFiles/votca_csg.dir/build.make csg/src/libcsg/CMakeFiles/votca_csg.dir/build make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f tools/src/tools/CMakeFiles/votca_property.dir/build.make tools/src/tools/CMakeFiles/votca_property.dir/build +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f tools/src/tests/CMakeFiles/unit_test_calculator.dir/build.make tools/src/tests/CMakeFiles/unit_test_calculator.dir/build make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f tools/src/tests/CMakeFiles/unit_test_correlate.dir/build.make tools/src/tests/CMakeFiles/unit_test_correlate.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make -f tools/src/tests/CMakeFiles/unit_test_constants.dir/build.make tools/src/tests/CMakeFiles/unit_test_constants.dir/build +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f tools/src/tests/CMakeFiles/unit_test_crosscorrelate.dir/build.make tools/src/tests/CMakeFiles/unit_test_crosscorrelate.dir/depend +make -f tools/src/tests/CMakeFiles/unit_test_correlate.dir/build.make tools/src/tests/CMakeFiles/unit_test_correlate.dir/build +[ 10%] Building CXX object csg/src/libcsg/CMakeFiles/votca_csg.dir/beadlist.cc.o make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 10%] Building CXX object tools/src/tests/CMakeFiles/unit_test_calculator.dir/test_calculator.cc.o [ 10%] Building CXX object tools/src/tools/CMakeFiles/votca_property.dir/votca_property.cc.o -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_crosscorrelate.dir/DependInfo.cmake --color= -make -f tools/src/tests/CMakeFiles/unit_test_cubicspline.dir/build.make tools/src/tests/CMakeFiles/unit_test_cubicspline.dir/depend +make -f tools/src/tests/CMakeFiles/unit_test_crosscorrelate.dir/build.make tools/src/tests/CMakeFiles/unit_test_crosscorrelate.dir/build +[ 10%] Building CXX object csg/src/libcsg/CMakeFiles/votca_csg.dir/beadmotif.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DGMX_DOUBLE=1 -DTMPI_USE_VISIBILITY -Dvotca_csg_EXPORTS -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT csg/src/libcsg/CMakeFiles/votca_csg.dir/beadlist.cc.o -MF CMakeFiles/votca_csg.dir/beadlist.cc.o.d -o CMakeFiles/votca_csg.dir/beadlist.cc.o -c /build/reproducible-path/votca-2022.1/csg/src/libcsg/beadlist.cc cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tools && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT tools/src/tools/CMakeFiles/votca_property.dir/votca_property.cc.o -MF CMakeFiles/votca_property.dir/votca_property.cc.o.d -o CMakeFiles/votca_property.dir/votca_property.cc.o -c /build/reproducible-path/votca-2022.1/tools/src/tools/votca_property.cc +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 10%] Building CXX object csg/src/libcsg/CMakeFiles/votca_csg.dir/beadmotifalgorithms.cc.o +[ 10%] Building CXX object tools/src/tests/CMakeFiles/unit_test_calculator.dir/test_calculator.cc.o +make -f tools/src/tests/CMakeFiles/unit_test_cubicspline.dir/build.make tools/src/tests/CMakeFiles/unit_test_cubicspline.dir/build +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DGMX_DOUBLE=1 -DTMPI_USE_VISIBILITY -Dvotca_csg_EXPORTS -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT csg/src/libcsg/CMakeFiles/votca_csg.dir/beadmotif.cc.o -MF CMakeFiles/votca_csg.dir/beadmotif.cc.o.d -o CMakeFiles/votca_csg.dir/beadmotif.cc.o -c /build/reproducible-path/votca-2022.1/csg/src/libcsg/beadmotif.cc cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DTOOLS_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/tools/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT tools/src/tests/CMakeFiles/unit_test_calculator.dir/test_calculator.cc.o -MF CMakeFiles/unit_test_calculator.dir/test_calculator.cc.o.d -o CMakeFiles/unit_test_calculator.dir/test_calculator.cc.o -c /build/reproducible-path/votca-2022.1/tools/src/tests/test_calculator.cc make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_cubicspline.dir/DependInfo.cmake --color= make -f tools/src/tests/CMakeFiles/unit_test_datacollection.dir/build.make tools/src/tests/CMakeFiles/unit_test_datacollection.dir/depend +[ 10%] Building CXX object csg/src/libcsg/CMakeFiles/votca_csg.dir/beadmotifconnector.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DGMX_DOUBLE=1 -DTMPI_USE_VISIBILITY -Dvotca_csg_EXPORTS -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT csg/src/libcsg/CMakeFiles/votca_csg.dir/beadmotifalgorithms.cc.o -MF CMakeFiles/votca_csg.dir/beadmotifalgorithms.cc.o.d -o CMakeFiles/votca_csg.dir/beadmotifalgorithms.cc.o -c /build/reproducible-path/votca-2022.1/csg/src/libcsg/beadmotifalgorithms.cc +[ 10%] Building CXX object tools/src/tests/CMakeFiles/unit_test_constants.dir/test_constants.cc.o +[ 10%] Building CXX object tools/src/tests/CMakeFiles/unit_test_correlate.dir/test_correlate.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DTOOLS_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/tools/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT tools/src/tests/CMakeFiles/unit_test_constants.dir/test_constants.cc.o -MF CMakeFiles/unit_test_constants.dir/test_constants.cc.o.d -o CMakeFiles/unit_test_constants.dir/test_constants.cc.o -c /build/reproducible-path/votca-2022.1/tools/src/tests/test_constants.cc +make -f tools/src/tests/CMakeFiles/unit_test_edge_base.dir/build.make tools/src/tests/CMakeFiles/unit_test_edge_base.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_datacollection.dir/DependInfo.cmake --color= -make -f tools/src/tests/CMakeFiles/unit_test_edge_base.dir/build.make tools/src/tests/CMakeFiles/unit_test_edge_base.dir/depend +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DTOOLS_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/tools/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT tools/src/tests/CMakeFiles/unit_test_correlate.dir/test_correlate.cc.o -MF CMakeFiles/unit_test_correlate.dir/test_correlate.cc.o.d -o CMakeFiles/unit_test_correlate.dir/test_correlate.cc.o -c /build/reproducible-path/votca-2022.1/tools/src/tests/test_correlate.cc +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DGMX_DOUBLE=1 -DTMPI_USE_VISIBILITY -Dvotca_csg_EXPORTS -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT csg/src/libcsg/CMakeFiles/votca_csg.dir/beadmotifconnector.cc.o -MF CMakeFiles/votca_csg.dir/beadmotifconnector.cc.o.d -o CMakeFiles/votca_csg.dir/beadmotifconnector.cc.o -c /build/reproducible-path/votca-2022.1/csg/src/libcsg/beadmotifconnector.cc make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_edge_base.dir/DependInfo.cmake --color= -[ 10%] Building CXX object tools/src/tests/CMakeFiles/unit_test_correlate.dir/test_correlate.cc.o make -f tools/src/tests/CMakeFiles/unit_test_edgecontainer.dir/build.make tools/src/tests/CMakeFiles/unit_test_edgecontainer.dir/depend -[ 10%] Building CXX object tools/src/tests/CMakeFiles/unit_test_constants.dir/test_constants.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DTOOLS_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/tools/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT tools/src/tests/CMakeFiles/unit_test_correlate.dir/test_correlate.cc.o -MF CMakeFiles/unit_test_correlate.dir/test_correlate.cc.o.d -o CMakeFiles/unit_test_correlate.dir/test_correlate.cc.o -c /build/reproducible-path/votca-2022.1/tools/src/tests/test_correlate.cc -[ 10%] Building CXX object csg/src/libcsg/CMakeFiles/votca_csg.dir/beadlist.cc.o +[ 10%] Building CXX object tools/src/tests/CMakeFiles/unit_test_crosscorrelate.dir/test_crosscorrelate.cc.o make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_edgecontainer.dir/DependInfo.cmake --color= make -f tools/src/tests/CMakeFiles/unit_test_elements.dir/build.make tools/src/tests/CMakeFiles/unit_test_elements.dir/depend -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DTOOLS_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/tools/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT tools/src/tests/CMakeFiles/unit_test_constants.dir/test_constants.cc.o -MF CMakeFiles/unit_test_constants.dir/test_constants.cc.o.d -o CMakeFiles/unit_test_constants.dir/test_constants.cc.o -c /build/reproducible-path/votca-2022.1/tools/src/tests/test_constants.cc -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DGMX_DOUBLE=1 -DTMPI_USE_VISIBILITY -Dvotca_csg_EXPORTS -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT csg/src/libcsg/CMakeFiles/votca_csg.dir/beadlist.cc.o -MF CMakeFiles/votca_csg.dir/beadlist.cc.o.d -o CMakeFiles/votca_csg.dir/beadlist.cc.o -c /build/reproducible-path/votca-2022.1/csg/src/libcsg/beadlist.cc -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_elements.dir/DependInfo.cmake --color= -make -f tools/src/tests/CMakeFiles/unit_test_filesystem.dir/build.make tools/src/tests/CMakeFiles/unit_test_filesystem.dir/depend -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_filesystem.dir/DependInfo.cmake --color= -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DTOOLS_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/tools/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT tools/src/tests/CMakeFiles/unit_test_crosscorrelate.dir/test_crosscorrelate.cc.o -MF CMakeFiles/unit_test_crosscorrelate.dir/test_crosscorrelate.cc.o.d -o CMakeFiles/unit_test_crosscorrelate.dir/test_crosscorrelate.cc.o -c /build/reproducible-path/votca-2022.1/tools/src/tests/test_crosscorrelate.cc +[ 12%] Building CXX object tools/src/tests/CMakeFiles/unit_test_cubicspline.dir/test_cubicspline.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DTOOLS_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/tools/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT tools/src/tests/CMakeFiles/unit_test_cubicspline.dir/test_cubicspline.cc.o -MF CMakeFiles/unit_test_cubicspline.dir/test_cubicspline.cc.o.d -o CMakeFiles/unit_test_cubicspline.dir/test_cubicspline.cc.o -c /build/reproducible-path/votca-2022.1/tools/src/tests/test_cubicspline.cc make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f tools/src/tests/CMakeFiles/unit_test_crosscorrelate.dir/build.make tools/src/tests/CMakeFiles/unit_test_crosscorrelate.dir/build -[ 10%] Building CXX object csg/src/libcsg/CMakeFiles/votca_csg.dir/beadmotif.cc.o make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 10%] Building CXX object csg/src/libcsg/CMakeFiles/votca_csg.dir/beadmotifalgorithms.cc.o -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f tools/src/tests/CMakeFiles/unit_test_edgecontainer.dir/build.make tools/src/tests/CMakeFiles/unit_test_edgecontainer.dir/build -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DGMX_DOUBLE=1 -DTMPI_USE_VISIBILITY -Dvotca_csg_EXPORTS -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT csg/src/libcsg/CMakeFiles/votca_csg.dir/beadmotif.cc.o -MF CMakeFiles/votca_csg.dir/beadmotif.cc.o.d -o CMakeFiles/votca_csg.dir/beadmotif.cc.o -c /build/reproducible-path/votca-2022.1/csg/src/libcsg/beadmotif.cc -[ 10%] Building CXX object csg/src/libcsg/CMakeFiles/votca_csg.dir/beadmotifconnector.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_elements.dir/DependInfo.cmake --color= make -f tools/src/tests/CMakeFiles/unit_test_datacollection.dir/build.make tools/src/tests/CMakeFiles/unit_test_datacollection.dir/build -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f tools/src/tests/CMakeFiles/unit_test_cubicspline.dir/build.make tools/src/tests/CMakeFiles/unit_test_cubicspline.dir/build -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DGMX_DOUBLE=1 -DTMPI_USE_VISIBILITY -Dvotca_csg_EXPORTS -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT csg/src/libcsg/CMakeFiles/votca_csg.dir/beadmotifalgorithms.cc.o -MF CMakeFiles/votca_csg.dir/beadmotifalgorithms.cc.o.d -o CMakeFiles/votca_csg.dir/beadmotifalgorithms.cc.o -c /build/reproducible-path/votca-2022.1/csg/src/libcsg/beadmotifalgorithms.cc -[ 10%] Building CXX object csg/src/libcsg/CMakeFiles/votca_csg.dir/beadstructure.cc.o make -f tools/src/tests/CMakeFiles/unit_test_edge_base.dir/build.make tools/src/tests/CMakeFiles/unit_test_edge_base.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DGMX_DOUBLE=1 -DTMPI_USE_VISIBILITY -Dvotca_csg_EXPORTS -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT csg/src/libcsg/CMakeFiles/votca_csg.dir/beadmotifconnector.cc.o -MF CMakeFiles/votca_csg.dir/beadmotifconnector.cc.o.d -o CMakeFiles/votca_csg.dir/beadmotifconnector.cc.o -c /build/reproducible-path/votca-2022.1/csg/src/libcsg/beadmotifconnector.cc +make -f tools/src/tests/CMakeFiles/unit_test_edgecontainer.dir/build.make tools/src/tests/CMakeFiles/unit_test_edgecontainer.dir/build make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 12%] Building CXX object csg/src/libcsg/CMakeFiles/votca_csg.dir/beadstructure.cc.o make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DGMX_DOUBLE=1 -DTMPI_USE_VISIBILITY -Dvotca_csg_EXPORTS -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT csg/src/libcsg/CMakeFiles/votca_csg.dir/beadstructure.cc.o -MF CMakeFiles/votca_csg.dir/beadstructure.cc.o.d -o CMakeFiles/votca_csg.dir/beadstructure.cc.o -c /build/reproducible-path/votca-2022.1/csg/src/libcsg/beadstructure.cc make -f tools/src/tests/CMakeFiles/unit_test_elements.dir/build.make tools/src/tests/CMakeFiles/unit_test_elements.dir/build +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DGMX_DOUBLE=1 -DTMPI_USE_VISIBILITY -Dvotca_csg_EXPORTS -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT csg/src/libcsg/CMakeFiles/votca_csg.dir/beadstructure.cc.o -MF CMakeFiles/votca_csg.dir/beadstructure.cc.o.d -o CMakeFiles/votca_csg.dir/beadstructure.cc.o -c /build/reproducible-path/votca-2022.1/csg/src/libcsg/beadstructure.cc make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f tools/src/tests/CMakeFiles/unit_test_filesystem.dir/build.make tools/src/tests/CMakeFiles/unit_test_filesystem.dir/build -[ 10%] Building CXX object tools/src/tests/CMakeFiles/unit_test_datacollection.dir/test_datacollection.cc.o -[ 10%] Building CXX object tools/src/tests/CMakeFiles/unit_test_crosscorrelate.dir/test_crosscorrelate.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DTOOLS_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/tools/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT tools/src/tests/CMakeFiles/unit_test_datacollection.dir/test_datacollection.cc.o -MF CMakeFiles/unit_test_datacollection.dir/test_datacollection.cc.o.d -o CMakeFiles/unit_test_datacollection.dir/test_datacollection.cc.o -c /build/reproducible-path/votca-2022.1/tools/src/tests/test_datacollection.cc -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 10%] Building CXX object tools/src/tests/CMakeFiles/unit_test_edgecontainer.dir/test_edgecontainer.cc.o -[ 12%] Building CXX object tools/src/tests/CMakeFiles/unit_test_cubicspline.dir/test_cubicspline.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DTOOLS_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/tools/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT tools/src/tests/CMakeFiles/unit_test_edgecontainer.dir/test_edgecontainer.cc.o -MF CMakeFiles/unit_test_edgecontainer.dir/test_edgecontainer.cc.o.d -o CMakeFiles/unit_test_edgecontainer.dir/test_edgecontainer.cc.o -c /build/reproducible-path/votca-2022.1/tools/src/tests/test_edgecontainer.cc -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DTOOLS_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/tools/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT tools/src/tests/CMakeFiles/unit_test_crosscorrelate.dir/test_crosscorrelate.cc.o -MF CMakeFiles/unit_test_crosscorrelate.dir/test_crosscorrelate.cc.o.d -o CMakeFiles/unit_test_crosscorrelate.dir/test_crosscorrelate.cc.o -c /build/reproducible-path/votca-2022.1/tools/src/tests/test_crosscorrelate.cc -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DTOOLS_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/tools/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT tools/src/tests/CMakeFiles/unit_test_cubicspline.dir/test_cubicspline.cc.o -MF CMakeFiles/unit_test_cubicspline.dir/test_cubicspline.cc.o.d -o CMakeFiles/unit_test_cubicspline.dir/test_cubicspline.cc.o -c /build/reproducible-path/votca-2022.1/tools/src/tests/test_cubicspline.cc [ 12%] Building CXX object tools/src/tests/CMakeFiles/unit_test_edge_base.dir/test_edge_base.cc.o +[ 12%] Building CXX object tools/src/tests/CMakeFiles/unit_test_datacollection.dir/test_datacollection.cc.o cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DTOOLS_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/tools/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT tools/src/tests/CMakeFiles/unit_test_edge_base.dir/test_edge_base.cc.o -MF CMakeFiles/unit_test_edge_base.dir/test_edge_base.cc.o.d -o CMakeFiles/unit_test_edge_base.dir/test_edge_base.cc.o -c /build/reproducible-path/votca-2022.1/tools/src/tests/test_edge_base.cc +[ 12%] Building CXX object tools/src/tests/CMakeFiles/unit_test_edgecontainer.dir/test_edgecontainer.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DTOOLS_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/tools/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT tools/src/tests/CMakeFiles/unit_test_datacollection.dir/test_datacollection.cc.o -MF CMakeFiles/unit_test_datacollection.dir/test_datacollection.cc.o.d -o CMakeFiles/unit_test_datacollection.dir/test_datacollection.cc.o -c /build/reproducible-path/votca-2022.1/tools/src/tests/test_datacollection.cc +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DTOOLS_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/tools/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT tools/src/tests/CMakeFiles/unit_test_edgecontainer.dir/test_edgecontainer.cc.o -MF CMakeFiles/unit_test_edgecontainer.dir/test_edgecontainer.cc.o.d -o CMakeFiles/unit_test_edgecontainer.dir/test_edgecontainer.cc.o -c /build/reproducible-path/votca-2022.1/tools/src/tests/test_edgecontainer.cc [ 12%] Building CXX object tools/src/tests/CMakeFiles/unit_test_elements.dir/test_elements.cc.o cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DTOOLS_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/tools/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT tools/src/tests/CMakeFiles/unit_test_elements.dir/test_elements.cc.o -MF CMakeFiles/unit_test_elements.dir/test_elements.cc.o.d -o CMakeFiles/unit_test_elements.dir/test_elements.cc.o -c /build/reproducible-path/votca-2022.1/tools/src/tests/test_elements.cc +[ 12%] Linking CXX executable unit_test_constants +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_constants.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_constants.dir/test_constants.cc.o -o unit_test_constants -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools ../libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libfftw3.so +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 12%] Built target unit_test_constants +make -f tools/src/tests/CMakeFiles/unit_test_filesystem.dir/build.make tools/src/tests/CMakeFiles/unit_test_filesystem.dir/depend +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_filesystem.dir/DependInfo.cmake --color= +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f tools/src/tests/CMakeFiles/unit_test_filesystem.dir/build.make tools/src/tests/CMakeFiles/unit_test_filesystem.dir/build +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' [ 12%] Building CXX object tools/src/tests/CMakeFiles/unit_test_filesystem.dir/test_filesystem.cc.o cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DTOOLS_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/tools/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT tools/src/tests/CMakeFiles/unit_test_filesystem.dir/test_filesystem.cc.o -MF CMakeFiles/unit_test_filesystem.dir/test_filesystem.cc.o.d -o CMakeFiles/unit_test_filesystem.dir/test_filesystem.cc.o -c /build/reproducible-path/votca-2022.1/tools/src/tests/test_filesystem.cc -[ 12%] Linking CXX executable unit_test_filesystem -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_filesystem.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_filesystem.dir/test_filesystem.cc.o -o unit_test_filesystem -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools ../libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libfftw3.so +[ 12%] Linking CXX executable unit_test_calculator +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_calculator.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_calculator.dir/test_calculator.cc.o -o unit_test_calculator -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools ../libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libfftw3.so +[ 12%] Building CXX object csg/src/libcsg/CMakeFiles/votca_csg.dir/beadstructurealgorithms.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DGMX_DOUBLE=1 -DTMPI_USE_VISIBILITY -Dvotca_csg_EXPORTS -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT csg/src/libcsg/CMakeFiles/votca_csg.dir/beadstructurealgorithms.cc.o -MF CMakeFiles/votca_csg.dir/beadstructurealgorithms.cc.o.d -o CMakeFiles/votca_csg.dir/beadstructurealgorithms.cc.o -c /build/reproducible-path/votca-2022.1/csg/src/libcsg/beadstructurealgorithms.cc make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 12%] Built target unit_test_filesystem +[ 12%] Built target unit_test_calculator make -f tools/src/tests/CMakeFiles/unit_test_floatingpointcomparison.dir/build.make tools/src/tests/CMakeFiles/unit_test_floatingpointcomparison.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_floatingpointcomparison.dir/DependInfo.cmake --color= @@ -3329,137 +3372,132 @@ make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' [ 12%] Building CXX object tools/src/tests/CMakeFiles/unit_test_floatingpointcomparison.dir/test_floatingpointcomparison.cc.o cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DTOOLS_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/tools/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT tools/src/tests/CMakeFiles/unit_test_floatingpointcomparison.dir/test_floatingpointcomparison.cc.o -MF CMakeFiles/unit_test_floatingpointcomparison.dir/test_floatingpointcomparison.cc.o.d -o CMakeFiles/unit_test_floatingpointcomparison.dir/test_floatingpointcomparison.cc.o -c /build/reproducible-path/votca-2022.1/tools/src/tests/test_floatingpointcomparison.cc -[ 12%] Linking CXX executable unit_test_floatingpointcomparison -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_floatingpointcomparison.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_floatingpointcomparison.dir/test_floatingpointcomparison.cc.o -o unit_test_floatingpointcomparison -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools ../libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libfftw3.so +[ 12%] Linking CXX executable unit_test_correlate +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_correlate.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_correlate.dir/test_correlate.cc.o -o unit_test_correlate -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools ../libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libfftw3.so make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 12%] Built target unit_test_floatingpointcomparison +[ 12%] Built target unit_test_correlate make -f tools/src/tests/CMakeFiles/unit_test_graphalgorithm.dir/build.make tools/src/tests/CMakeFiles/unit_test_graphalgorithm.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_graphalgorithm.dir/DependInfo.cmake --color= +[ 12%] Building CXX object csg/src/libcsg/CMakeFiles/votca_csg.dir/boundarycondition.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DGMX_DOUBLE=1 -DTMPI_USE_VISIBILITY -Dvotca_csg_EXPORTS -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT csg/src/libcsg/CMakeFiles/votca_csg.dir/boundarycondition.cc.o -MF CMakeFiles/votca_csg.dir/boundarycondition.cc.o.d -o CMakeFiles/votca_csg.dir/boundarycondition.cc.o -c /build/reproducible-path/votca-2022.1/csg/src/libcsg/boundarycondition.cc make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make -f tools/src/tests/CMakeFiles/unit_test_graphalgorithm.dir/build.make tools/src/tests/CMakeFiles/unit_test_graphalgorithm.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' [ 12%] Building CXX object tools/src/tests/CMakeFiles/unit_test_graphalgorithm.dir/test_graphalgorithm.cc.o cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DTOOLS_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/tools/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT tools/src/tests/CMakeFiles/unit_test_graphalgorithm.dir/test_graphalgorithm.cc.o -MF CMakeFiles/unit_test_graphalgorithm.dir/test_graphalgorithm.cc.o.d -o CMakeFiles/unit_test_graphalgorithm.dir/test_graphalgorithm.cc.o -c /build/reproducible-path/votca-2022.1/tools/src/tests/test_graphalgorithm.cc -[ 12%] Linking CXX executable unit_test_constants -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_constants.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_constants.dir/test_constants.cc.o -o unit_test_constants -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools ../libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libfftw3.so +[ 13%] Building CXX object csg/src/libcsg/CMakeFiles/votca_csg.dir/cgengine.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DGMX_DOUBLE=1 -DTMPI_USE_VISIBILITY -Dvotca_csg_EXPORTS -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT csg/src/libcsg/CMakeFiles/votca_csg.dir/cgengine.cc.o -MF CMakeFiles/votca_csg.dir/cgengine.cc.o.d -o CMakeFiles/votca_csg.dir/cgengine.cc.o -c /build/reproducible-path/votca-2022.1/csg/src/libcsg/cgengine.cc +[ 13%] Linking CXX executable unit_test_crosscorrelate +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_crosscorrelate.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_crosscorrelate.dir/test_crosscorrelate.cc.o -o unit_test_crosscorrelate -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools ../libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libfftw3.so make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 12%] Built target unit_test_constants +[ 13%] Built target unit_test_crosscorrelate make -f tools/src/tests/CMakeFiles/unit_test_graph_base.dir/build.make tools/src/tests/CMakeFiles/unit_test_graph_base.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_graph_base.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make -f tools/src/tests/CMakeFiles/unit_test_graph_base.dir/build.make tools/src/tests/CMakeFiles/unit_test_graph_base.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 12%] Building CXX object tools/src/tests/CMakeFiles/unit_test_graph_base.dir/test_graph_base.cc.o +[ 13%] Building CXX object tools/src/tests/CMakeFiles/unit_test_graph_base.dir/test_graph_base.cc.o cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DTOOLS_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/tools/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT tools/src/tests/CMakeFiles/unit_test_graph_base.dir/test_graph_base.cc.o -MF CMakeFiles/unit_test_graph_base.dir/test_graph_base.cc.o.d -o CMakeFiles/unit_test_graph_base.dir/test_graph_base.cc.o -c /build/reproducible-path/votca-2022.1/tools/src/tests/test_graph_base.cc -[ 12%] Linking CXX executable unit_test_calculator -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_calculator.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_calculator.dir/test_calculator.cc.o -o unit_test_calculator -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools ../libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libfftw3.so +[ 13%] Linking CXX executable unit_test_edge_base +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_edge_base.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_edge_base.dir/test_edge_base.cc.o -o unit_test_edge_base -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools ../libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libfftw3.so make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 12%] Built target unit_test_calculator +[ 13%] Built target unit_test_edge_base make -f tools/src/tests/CMakeFiles/unit_test_graph_bf_visitor.dir/build.make tools/src/tests/CMakeFiles/unit_test_graph_bf_visitor.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_graph_bf_visitor.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make -f tools/src/tests/CMakeFiles/unit_test_graph_bf_visitor.dir/build.make tools/src/tests/CMakeFiles/unit_test_graph_bf_visitor.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 12%] Building CXX object tools/src/tests/CMakeFiles/unit_test_graph_bf_visitor.dir/test_graph_bf_visitor.cc.o +[ 13%] Building CXX object tools/src/tests/CMakeFiles/unit_test_graph_bf_visitor.dir/test_graph_bf_visitor.cc.o cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DTOOLS_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/tools/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT tools/src/tests/CMakeFiles/unit_test_graph_bf_visitor.dir/test_graph_bf_visitor.cc.o -MF CMakeFiles/unit_test_graph_bf_visitor.dir/test_graph_bf_visitor.cc.o.d -o CMakeFiles/unit_test_graph_bf_visitor.dir/test_graph_bf_visitor.cc.o -c /build/reproducible-path/votca-2022.1/tools/src/tests/test_graph_bf_visitor.cc -[ 12%] Building CXX object csg/src/libcsg/CMakeFiles/votca_csg.dir/beadstructurealgorithms.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DGMX_DOUBLE=1 -DTMPI_USE_VISIBILITY -Dvotca_csg_EXPORTS -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT csg/src/libcsg/CMakeFiles/votca_csg.dir/beadstructurealgorithms.cc.o -MF CMakeFiles/votca_csg.dir/beadstructurealgorithms.cc.o.d -o CMakeFiles/votca_csg.dir/beadstructurealgorithms.cc.o -c /build/reproducible-path/votca-2022.1/csg/src/libcsg/beadstructurealgorithms.cc -[ 12%] Building CXX object csg/src/libcsg/CMakeFiles/votca_csg.dir/boundarycondition.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DGMX_DOUBLE=1 -DTMPI_USE_VISIBILITY -Dvotca_csg_EXPORTS -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT csg/src/libcsg/CMakeFiles/votca_csg.dir/boundarycondition.cc.o -MF CMakeFiles/votca_csg.dir/boundarycondition.cc.o.d -o CMakeFiles/votca_csg.dir/boundarycondition.cc.o -c /build/reproducible-path/votca-2022.1/csg/src/libcsg/boundarycondition.cc -[ 13%] Building CXX object csg/src/libcsg/CMakeFiles/votca_csg.dir/cgengine.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DGMX_DOUBLE=1 -DTMPI_USE_VISIBILITY -Dvotca_csg_EXPORTS -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT csg/src/libcsg/CMakeFiles/votca_csg.dir/cgengine.cc.o -MF CMakeFiles/votca_csg.dir/cgengine.cc.o.d -o CMakeFiles/votca_csg.dir/cgengine.cc.o -c /build/reproducible-path/votca-2022.1/csg/src/libcsg/cgengine.cc -[ 13%] Linking CXX executable unit_test_edge_base -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_edge_base.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_edge_base.dir/test_edge_base.cc.o -o unit_test_edge_base -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools ../libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libfftw3.so -[ 13%] Linking CXX executable unit_test_correlate -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_correlate.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_correlate.dir/test_correlate.cc.o -o unit_test_correlate -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools ../libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libfftw3.so [ 13%] Linking CXX executable unit_test_elements cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_elements.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_elements.dir/test_elements.cc.o -o unit_test_elements -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools ../libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libfftw3.so +[ 13%] Linking CXX executable unit_test_cubicspline +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_cubicspline.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_cubicspline.dir/test_cubicspline.cc.o -o unit_test_cubicspline -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools ../libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libfftw3.so make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 13%] Built target unit_test_edge_base +[ 13%] Built target unit_test_elements make -f tools/src/tests/CMakeFiles/unit_test_graph_df_visitor.dir/build.make tools/src/tests/CMakeFiles/unit_test_graph_df_visitor.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_graph_df_visitor.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make -f tools/src/tests/CMakeFiles/unit_test_graph_df_visitor.dir/build.make tools/src/tests/CMakeFiles/unit_test_graph_df_visitor.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 13%] Built target unit_test_correlate +[ 13%] Building CXX object tools/src/tests/CMakeFiles/unit_test_graph_df_visitor.dir/test_graph_df_visitor.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DTOOLS_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/tools/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT tools/src/tests/CMakeFiles/unit_test_graph_df_visitor.dir/test_graph_df_visitor.cc.o -MF CMakeFiles/unit_test_graph_df_visitor.dir/test_graph_df_visitor.cc.o.d -o CMakeFiles/unit_test_graph_df_visitor.dir/test_graph_df_visitor.cc.o -c /build/reproducible-path/votca-2022.1/tools/src/tests/test_graph_df_visitor.cc +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 13%] Built target unit_test_cubicspline make -f tools/src/tests/CMakeFiles/unit_test_graphdistvisitor.dir/build.make tools/src/tests/CMakeFiles/unit_test_graphdistvisitor.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_graphdistvisitor.dir/DependInfo.cmake --color= -[ 13%] Building CXX object tools/src/tests/CMakeFiles/unit_test_graph_df_visitor.dir/test_graph_df_visitor.cc.o -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DTOOLS_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/tools/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT tools/src/tests/CMakeFiles/unit_test_graph_df_visitor.dir/test_graph_df_visitor.cc.o -MF CMakeFiles/unit_test_graph_df_visitor.dir/test_graph_df_visitor.cc.o.d -o CMakeFiles/unit_test_graph_df_visitor.dir/test_graph_df_visitor.cc.o -c /build/reproducible-path/votca-2022.1/tools/src/tests/test_graph_df_visitor.cc make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make -f tools/src/tests/CMakeFiles/unit_test_graphdistvisitor.dir/build.make tools/src/tests/CMakeFiles/unit_test_graphdistvisitor.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 13%] Built target unit_test_elements +[ 13%] Building CXX object tools/src/tests/CMakeFiles/unit_test_graphdistvisitor.dir/test_graphdistvisitor.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DTOOLS_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/tools/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT tools/src/tests/CMakeFiles/unit_test_graphdistvisitor.dir/test_graphdistvisitor.cc.o -MF CMakeFiles/unit_test_graphdistvisitor.dir/test_graphdistvisitor.cc.o.d -o CMakeFiles/unit_test_graphdistvisitor.dir/test_graphdistvisitor.cc.o -c /build/reproducible-path/votca-2022.1/tools/src/tests/test_graphdistvisitor.cc +[ 13%] Building CXX object csg/src/libcsg/CMakeFiles/votca_csg.dir/cgmoleculedef.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DGMX_DOUBLE=1 -DTMPI_USE_VISIBILITY -Dvotca_csg_EXPORTS -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT csg/src/libcsg/CMakeFiles/votca_csg.dir/cgmoleculedef.cc.o -MF CMakeFiles/votca_csg.dir/cgmoleculedef.cc.o.d -o CMakeFiles/votca_csg.dir/cgmoleculedef.cc.o -c /build/reproducible-path/votca-2022.1/csg/src/libcsg/cgmoleculedef.cc +[ 13%] Linking CXX executable unit_test_filesystem +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_filesystem.dir/link.txt --verbose=1 +[ 15%] Linking CXX executable votca_property +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/votca_property.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_filesystem.dir/test_filesystem.cc.o -o unit_test_filesystem -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools ../libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libfftw3.so +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/votca_property.dir/votca_property.cc.o -o votca_property -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools: ../libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libfftw3.so +[ 15%] Linking CXX executable unit_test_floatingpointcomparison +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_floatingpointcomparison.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_floatingpointcomparison.dir/test_floatingpointcomparison.cc.o -o unit_test_floatingpointcomparison -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools ../libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libfftw3.so +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 15%] Built target votca_property make -f tools/src/tests/CMakeFiles/unit_test_graphnode.dir/build.make tools/src/tests/CMakeFiles/unit_test_graphnode.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_graphnode.dir/DependInfo.cmake --color= -[ 13%] Building CXX object tools/src/tests/CMakeFiles/unit_test_graphdistvisitor.dir/test_graphdistvisitor.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DTOOLS_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/tools/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT tools/src/tests/CMakeFiles/unit_test_graphdistvisitor.dir/test_graphdistvisitor.cc.o -MF CMakeFiles/unit_test_graphdistvisitor.dir/test_graphdistvisitor.cc.o.d -o CMakeFiles/unit_test_graphdistvisitor.dir/test_graphdistvisitor.cc.o -c /build/reproducible-path/votca-2022.1/tools/src/tests/test_graphdistvisitor.cc +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 15%] Built target unit_test_filesystem make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make -f tools/src/tests/CMakeFiles/unit_test_graphnode.dir/build.make tools/src/tests/CMakeFiles/unit_test_graphnode.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 15%] Building CXX object tools/src/tests/CMakeFiles/unit_test_graphnode.dir/test_graphnode.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DTOOLS_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/tools/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT tools/src/tests/CMakeFiles/unit_test_graphnode.dir/test_graphnode.cc.o -MF CMakeFiles/unit_test_graphnode.dir/test_graphnode.cc.o.d -o CMakeFiles/unit_test_graphnode.dir/test_graphnode.cc.o -c /build/reproducible-path/votca-2022.1/tools/src/tests/test_graphnode.cc -[ 15%] Linking CXX executable unit_test_crosscorrelate -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_crosscorrelate.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_crosscorrelate.dir/test_crosscorrelate.cc.o -o unit_test_crosscorrelate -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools ../libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libfftw3.so -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 15%] Built target unit_test_crosscorrelate make -f tools/src/tests/CMakeFiles/unit_test_graphvisitor.dir/build.make tools/src/tests/CMakeFiles/unit_test_graphvisitor.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_graphvisitor.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f tools/src/tests/CMakeFiles/unit_test_graphvisitor.dir/build.make tools/src/tests/CMakeFiles/unit_test_graphvisitor.dir/build -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 15%] Building CXX object tools/src/tests/CMakeFiles/unit_test_graphvisitor.dir/test_graphvisitor.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DTOOLS_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/tools/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT tools/src/tests/CMakeFiles/unit_test_graphvisitor.dir/test_graphvisitor.cc.o -MF CMakeFiles/unit_test_graphvisitor.dir/test_graphvisitor.cc.o.d -o CMakeFiles/unit_test_graphvisitor.dir/test_graphvisitor.cc.o -c /build/reproducible-path/votca-2022.1/tools/src/tests/test_graphvisitor.cc -[ 15%] Linking CXX executable unit_test_cubicspline -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_cubicspline.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_cubicspline.dir/test_cubicspline.cc.o -o unit_test_cubicspline -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools ../libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libfftw3.so -[ 16%] Linking CXX executable votca_property -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/votca_property.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/votca_property.dir/votca_property.cc.o -o votca_property -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools: ../libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libfftw3.so -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 16%] Built target votca_property +[ 16%] Building CXX object tools/src/tests/CMakeFiles/unit_test_graphnode.dir/test_graphnode.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DTOOLS_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/tools/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT tools/src/tests/CMakeFiles/unit_test_graphnode.dir/test_graphnode.cc.o -MF CMakeFiles/unit_test_graphnode.dir/test_graphnode.cc.o.d -o CMakeFiles/unit_test_graphnode.dir/test_graphnode.cc.o -c /build/reproducible-path/votca-2022.1/tools/src/tests/test_graphnode.cc +[ 16%] Built target unit_test_floatingpointcomparison make -f tools/src/tests/CMakeFiles/unit_test_histogramnew.dir/build.make tools/src/tests/CMakeFiles/unit_test_histogramnew.dir/depend +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_histogramnew.dir/DependInfo.cmake --color= -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f tools/src/tests/CMakeFiles/unit_test_graphvisitor.dir/build.make tools/src/tests/CMakeFiles/unit_test_graphvisitor.dir/build +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make -f tools/src/tests/CMakeFiles/unit_test_histogramnew.dir/build.make tools/src/tests/CMakeFiles/unit_test_histogramnew.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 16%] Built target unit_test_cubicspline +[ 16%] Building CXX object tools/src/tests/CMakeFiles/unit_test_graphvisitor.dir/test_graphvisitor.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DTOOLS_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/tools/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT tools/src/tests/CMakeFiles/unit_test_graphvisitor.dir/test_graphvisitor.cc.o -MF CMakeFiles/unit_test_graphvisitor.dir/test_graphvisitor.cc.o.d -o CMakeFiles/unit_test_graphvisitor.dir/test_graphvisitor.cc.o -c /build/reproducible-path/votca-2022.1/tools/src/tests/test_graphvisitor.cc +[ 16%] Building CXX object tools/src/tests/CMakeFiles/unit_test_histogramnew.dir/test_histogramnew.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DTOOLS_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/tools/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT tools/src/tests/CMakeFiles/unit_test_histogramnew.dir/test_histogramnew.cc.o -MF CMakeFiles/unit_test_histogramnew.dir/test_histogramnew.cc.o.d -o CMakeFiles/unit_test_histogramnew.dir/test_histogramnew.cc.o -c /build/reproducible-path/votca-2022.1/tools/src/tests/test_histogramnew.cc +[ 16%] Linking CXX executable unit_test_edgecontainer +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_edgecontainer.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_edgecontainer.dir/test_edgecontainer.cc.o -o unit_test_edgecontainer -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools ../libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libfftw3.so +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 16%] Built target unit_test_edgecontainer make -f tools/src/tests/CMakeFiles/unit_test_identity.dir/build.make tools/src/tests/CMakeFiles/unit_test_identity.dir/depend +[ 16%] Linking CXX executable unit_test_datacollection +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_datacollection.dir/link.txt --verbose=1 make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_identity.dir/DependInfo.cmake --color= -[ 16%] Building CXX object tools/src/tests/CMakeFiles/unit_test_histogramnew.dir/test_histogramnew.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DTOOLS_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/tools/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT tools/src/tests/CMakeFiles/unit_test_histogramnew.dir/test_histogramnew.cc.o -MF CMakeFiles/unit_test_histogramnew.dir/test_histogramnew.cc.o.d -o CMakeFiles/unit_test_histogramnew.dir/test_histogramnew.cc.o -c /build/reproducible-path/votca-2022.1/tools/src/tests/test_histogramnew.cc +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_datacollection.dir/test_datacollection.cc.o -o unit_test_datacollection -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools ../libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libfftw3.so make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make -f tools/src/tests/CMakeFiles/unit_test_identity.dir/build.make tools/src/tests/CMakeFiles/unit_test_identity.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' [ 16%] Building CXX object tools/src/tests/CMakeFiles/unit_test_identity.dir/test_identity.cc.o cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DTOOLS_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/tools/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT tools/src/tests/CMakeFiles/unit_test_identity.dir/test_identity.cc.o -MF CMakeFiles/unit_test_identity.dir/test_identity.cc.o.d -o CMakeFiles/unit_test_identity.dir/test_identity.cc.o -c /build/reproducible-path/votca-2022.1/tools/src/tests/test_identity.cc -[ 16%] Building CXX object csg/src/libcsg/CMakeFiles/votca_csg.dir/cgmoleculedef.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DGMX_DOUBLE=1 -DTMPI_USE_VISIBILITY -Dvotca_csg_EXPORTS -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT csg/src/libcsg/CMakeFiles/votca_csg.dir/cgmoleculedef.cc.o -MF CMakeFiles/votca_csg.dir/cgmoleculedef.cc.o.d -o CMakeFiles/votca_csg.dir/cgmoleculedef.cc.o -c /build/reproducible-path/votca-2022.1/csg/src/libcsg/cgmoleculedef.cc -[ 16%] Linking CXX executable unit_test_datacollection -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_datacollection.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_datacollection.dir/test_datacollection.cc.o -o unit_test_datacollection -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools ../libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libfftw3.so -[ 16%] Linking CXX executable unit_test_edgecontainer -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_edgecontainer.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_edgecontainer.dir/test_edgecontainer.cc.o -o unit_test_edgecontainer -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools ../libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libfftw3.so make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' [ 16%] Built target unit_test_datacollection make -f tools/src/tests/CMakeFiles/unit_test_linalg.dir/build.make tools/src/tests/CMakeFiles/unit_test_linalg.dir/depend @@ -3468,10 +3506,19 @@ make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make -f tools/src/tests/CMakeFiles/unit_test_linalg.dir/build.make tools/src/tests/CMakeFiles/unit_test_linalg.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' [ 16%] Building CXX object tools/src/tests/CMakeFiles/unit_test_linalg.dir/test_linalg.cc.o cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DTOOLS_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/tools/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT tools/src/tests/CMakeFiles/unit_test_linalg.dir/test_linalg.cc.o -MF CMakeFiles/unit_test_linalg.dir/test_linalg.cc.o.d -o CMakeFiles/unit_test_linalg.dir/test_linalg.cc.o -c /build/reproducible-path/votca-2022.1/tools/src/tests/test_linalg.cc -[ 16%] Built target unit_test_edgecontainer +[ 16%] Building CXX object csg/src/libcsg/CMakeFiles/votca_csg.dir/csgapplication.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DGMX_DOUBLE=1 -DTMPI_USE_VISIBILITY -Dvotca_csg_EXPORTS -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT csg/src/libcsg/CMakeFiles/votca_csg.dir/csgapplication.cc.o -MF CMakeFiles/votca_csg.dir/csgapplication.cc.o.d -o CMakeFiles/votca_csg.dir/csgapplication.cc.o -c /build/reproducible-path/votca-2022.1/csg/src/libcsg/csgapplication.cc +[ 16%] Building CXX object csg/src/libcsg/CMakeFiles/votca_csg.dir/exclusionlist.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DGMX_DOUBLE=1 -DTMPI_USE_VISIBILITY -Dvotca_csg_EXPORTS -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT csg/src/libcsg/CMakeFiles/votca_csg.dir/exclusionlist.cc.o -MF CMakeFiles/votca_csg.dir/exclusionlist.cc.o.d -o CMakeFiles/votca_csg.dir/exclusionlist.cc.o -c /build/reproducible-path/votca-2022.1/csg/src/libcsg/exclusionlist.cc +[ 16%] Building CXX object csg/src/libcsg/CMakeFiles/votca_csg.dir/imcio.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DGMX_DOUBLE=1 -DTMPI_USE_VISIBILITY -Dvotca_csg_EXPORTS -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT csg/src/libcsg/CMakeFiles/votca_csg.dir/imcio.cc.o -MF CMakeFiles/votca_csg.dir/imcio.cc.o.d -o CMakeFiles/votca_csg.dir/imcio.cc.o -c /build/reproducible-path/votca-2022.1/csg/src/libcsg/imcio.cc +[ 16%] Linking CXX executable unit_test_identity +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_identity.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_identity.dir/test_identity.cc.o -o unit_test_identity -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools ../libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libfftw3.so +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 16%] Built target unit_test_identity make -f tools/src/tests/CMakeFiles/unit_test_name.dir/build.make tools/src/tests/CMakeFiles/unit_test_name.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_name.dir/DependInfo.cmake --color= @@ -3480,15 +3527,11 @@ make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' [ 16%] Building CXX object tools/src/tests/CMakeFiles/unit_test_name.dir/test_name.cc.o cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DTOOLS_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/tools/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT tools/src/tests/CMakeFiles/unit_test_name.dir/test_name.cc.o -MF CMakeFiles/unit_test_name.dir/test_name.cc.o.d -o CMakeFiles/unit_test_name.dir/test_name.cc.o -c /build/reproducible-path/votca-2022.1/tools/src/tests/test_name.cc -[ 16%] Building CXX object csg/src/libcsg/CMakeFiles/votca_csg.dir/csgapplication.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DGMX_DOUBLE=1 -DTMPI_USE_VISIBILITY -Dvotca_csg_EXPORTS -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT csg/src/libcsg/CMakeFiles/votca_csg.dir/csgapplication.cc.o -MF CMakeFiles/votca_csg.dir/csgapplication.cc.o.d -o CMakeFiles/votca_csg.dir/csgapplication.cc.o -c /build/reproducible-path/votca-2022.1/csg/src/libcsg/csgapplication.cc -[ 16%] Building CXX object csg/src/libcsg/CMakeFiles/votca_csg.dir/exclusionlist.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DGMX_DOUBLE=1 -DTMPI_USE_VISIBILITY -Dvotca_csg_EXPORTS -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT csg/src/libcsg/CMakeFiles/votca_csg.dir/exclusionlist.cc.o -MF CMakeFiles/votca_csg.dir/exclusionlist.cc.o.d -o CMakeFiles/votca_csg.dir/exclusionlist.cc.o -c /build/reproducible-path/votca-2022.1/csg/src/libcsg/exclusionlist.cc -[ 16%] Linking CXX executable unit_test_name -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_name.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_name.dir/test_name.cc.o -o unit_test_name -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools ../libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libfftw3.so +[ 16%] Linking CXX executable unit_test_histogramnew +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_histogramnew.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_histogramnew.dir/test_histogramnew.cc.o -o unit_test_histogramnew -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools ../libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libfftw3.so make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 16%] Built target unit_test_name +[ 16%] Built target unit_test_histogramnew make -f tools/src/tests/CMakeFiles/unit_test_objectfactory.dir/build.make tools/src/tests/CMakeFiles/unit_test_objectfactory.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_objectfactory.dir/DependInfo.cmake --color= @@ -3497,13 +3540,14 @@ make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' [ 16%] Building CXX object tools/src/tests/CMakeFiles/unit_test_objectfactory.dir/test_objectfactory.cc.o cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DTOOLS_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/tools/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT tools/src/tests/CMakeFiles/unit_test_objectfactory.dir/test_objectfactory.cc.o -MF CMakeFiles/unit_test_objectfactory.dir/test_objectfactory.cc.o.d -o CMakeFiles/unit_test_objectfactory.dir/test_objectfactory.cc.o -c /build/reproducible-path/votca-2022.1/tools/src/tests/test_objectfactory.cc -[ 16%] Building CXX object csg/src/libcsg/CMakeFiles/votca_csg.dir/imcio.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DGMX_DOUBLE=1 -DTMPI_USE_VISIBILITY -Dvotca_csg_EXPORTS -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT csg/src/libcsg/CMakeFiles/votca_csg.dir/imcio.cc.o -MF CMakeFiles/votca_csg.dir/imcio.cc.o.d -o CMakeFiles/votca_csg.dir/imcio.cc.o -c /build/reproducible-path/votca-2022.1/csg/src/libcsg/imcio.cc -[ 16%] Linking CXX executable unit_test_identity -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_identity.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_identity.dir/test_identity.cc.o -o unit_test_identity -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools ../libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libfftw3.so +[ 16%] Linking CXX executable unit_test_graphvisitor +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_graphvisitor.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_graphvisitor.dir/test_graphvisitor.cc.o -o unit_test_graphvisitor -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools ../libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libfftw3.so +[ 16%] Linking CXX executable unit_test_linalg +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_linalg.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_linalg.dir/test_linalg.cc.o -o unit_test_linalg -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools ../libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libfftw3.so make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 16%] Built target unit_test_identity +[ 16%] Built target unit_test_linalg make -f tools/src/tests/CMakeFiles/unit_test_optionshandler.dir/build.make tools/src/tests/CMakeFiles/unit_test_optionshandler.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_optionshandler.dir/DependInfo.cmake --color= @@ -3512,9 +3556,6 @@ make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' [ 16%] Building CXX object tools/src/tests/CMakeFiles/unit_test_optionshandler.dir/test_optionshandler.cc.o cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DTOOLS_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/tools/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT tools/src/tests/CMakeFiles/unit_test_optionshandler.dir/test_optionshandler.cc.o -MF CMakeFiles/unit_test_optionshandler.dir/test_optionshandler.cc.o.d -o CMakeFiles/unit_test_optionshandler.dir/test_optionshandler.cc.o -c /build/reproducible-path/votca-2022.1/tools/src/tests/test_optionshandler.cc -[ 16%] Linking CXX executable unit_test_graphvisitor -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_graphvisitor.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_graphvisitor.dir/test_graphvisitor.cc.o -o unit_test_graphvisitor -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools ../libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libfftw3.so make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' [ 16%] Built target unit_test_graphvisitor make -f tools/src/tests/CMakeFiles/unit_test_property.dir/build.make tools/src/tests/CMakeFiles/unit_test_property.dir/depend @@ -3525,11 +3566,11 @@ make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' [ 16%] Building CXX object tools/src/tests/CMakeFiles/unit_test_property.dir/test_property.cc.o cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DTOOLS_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/tools/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT tools/src/tests/CMakeFiles/unit_test_property.dir/test_property.cc.o -MF CMakeFiles/unit_test_property.dir/test_property.cc.o.d -o CMakeFiles/unit_test_property.dir/test_property.cc.o -c /build/reproducible-path/votca-2022.1/tools/src/tests/test_property.cc -[ 16%] Linking CXX executable unit_test_histogramnew -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_histogramnew.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_histogramnew.dir/test_histogramnew.cc.o -o unit_test_histogramnew -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools ../libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libfftw3.so +[ 16%] Linking CXX executable unit_test_graphdistvisitor +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_graphdistvisitor.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_graphdistvisitor.dir/test_graphdistvisitor.cc.o -o unit_test_graphdistvisitor -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools ../libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libfftw3.so make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 16%] Built target unit_test_histogramnew +[ 16%] Built target unit_test_graphdistvisitor make -f tools/src/tests/CMakeFiles/unit_test_reducededge.dir/build.make tools/src/tests/CMakeFiles/unit_test_reducededge.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_reducededge.dir/DependInfo.cmake --color= @@ -3538,34 +3579,24 @@ make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' [ 16%] Building CXX object tools/src/tests/CMakeFiles/unit_test_reducededge.dir/test_reducededge.cc.o cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DTOOLS_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/tools/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT tools/src/tests/CMakeFiles/unit_test_reducededge.dir/test_reducededge.cc.o -MF CMakeFiles/unit_test_reducededge.dir/test_reducededge.cc.o.d -o CMakeFiles/unit_test_reducededge.dir/test_reducededge.cc.o -c /build/reproducible-path/votca-2022.1/tools/src/tests/test_reducededge.cc -[ 16%] Linking CXX executable unit_test_linalg -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_linalg.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_linalg.dir/test_linalg.cc.o -o unit_test_linalg -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools ../libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libfftw3.so [ 16%] Linking CXX executable unit_test_graph_bf_visitor cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_graph_bf_visitor.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_graph_bf_visitor.dir/test_graph_bf_visitor.cc.o -o unit_test_graph_bf_visitor -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools ../libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libfftw3.so -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 16%] Linking CXX executable unit_test_graph_df_visitor +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_graph_df_visitor.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_graph_df_visitor.dir/test_graph_df_visitor.cc.o -o unit_test_graph_df_visitor -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools ../libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libfftw3.so make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' [ 16%] Built target unit_test_graph_bf_visitor -[ 16%] Built target unit_test_linalg make -f tools/src/tests/CMakeFiles/unit_test_reducedgraph.dir/build.make tools/src/tests/CMakeFiles/unit_test_reducedgraph.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_reducedgraph.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make -f tools/src/tests/CMakeFiles/unit_test_reducedgraph.dir/build.make tools/src/tests/CMakeFiles/unit_test_reducedgraph.dir/build -[ 16%] Building CXX object csg/src/libcsg/CMakeFiles/votca_csg.dir/map.cc.o make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DGMX_DOUBLE=1 -DTMPI_USE_VISIBILITY -Dvotca_csg_EXPORTS -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT csg/src/libcsg/CMakeFiles/votca_csg.dir/map.cc.o -MF CMakeFiles/votca_csg.dir/map.cc.o.d -o CMakeFiles/votca_csg.dir/map.cc.o -c /build/reproducible-path/votca-2022.1/csg/src/libcsg/map.cc +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' [ 16%] Building CXX object tools/src/tests/CMakeFiles/unit_test_reducedgraph.dir/test_reducedgraph.cc.o cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DTOOLS_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/tools/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT tools/src/tests/CMakeFiles/unit_test_reducedgraph.dir/test_reducedgraph.cc.o -MF CMakeFiles/unit_test_reducedgraph.dir/test_reducedgraph.cc.o.d -o CMakeFiles/unit_test_reducedgraph.dir/test_reducedgraph.cc.o -c /build/reproducible-path/votca-2022.1/tools/src/tests/test_reducedgraph.cc -[ 16%] Linking CXX executable unit_test_graphdistvisitor -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_graphdistvisitor.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_graphdistvisitor.dir/test_graphdistvisitor.cc.o -o unit_test_graphdistvisitor -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools ../libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libfftw3.so -[ 16%] Linking CXX executable unit_test_objectfactory -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_objectfactory.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_objectfactory.dir/test_objectfactory.cc.o -o unit_test_objectfactory -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools ../libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libfftw3.so -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 16%] Built target unit_test_graphdistvisitor +[ 16%] Built target unit_test_graph_df_visitor make -f tools/src/tests/CMakeFiles/unit_test_structureparameters.dir/build.make tools/src/tests/CMakeFiles/unit_test_structureparameters.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_structureparameters.dir/DependInfo.cmake --color= @@ -3574,19 +3605,22 @@ make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' [ 17%] Building CXX object tools/src/tests/CMakeFiles/unit_test_structureparameters.dir/test_structureparameters.cc.o cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DTOOLS_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/tools/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT tools/src/tests/CMakeFiles/unit_test_structureparameters.dir/test_structureparameters.cc.o -MF CMakeFiles/unit_test_structureparameters.dir/test_structureparameters.cc.o.d -o CMakeFiles/unit_test_structureparameters.dir/test_structureparameters.cc.o -c /build/reproducible-path/votca-2022.1/tools/src/tests/test_structureparameters.cc +[ 17%] Linking CXX executable unit_test_name +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_name.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_name.dir/test_name.cc.o -o unit_test_name -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools ../libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libfftw3.so make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 17%] Built target unit_test_objectfactory +[ 17%] Built target unit_test_name make -f tools/src/tests/CMakeFiles/unit_test_table.dir/build.make tools/src/tests/CMakeFiles/unit_test_table.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_table.dir/DependInfo.cmake --color= -[ 17%] Linking CXX executable unit_test_graphnode -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_graphnode.dir/link.txt --verbose=1 make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make -f tools/src/tests/CMakeFiles/unit_test_table.dir/build.make tools/src/tests/CMakeFiles/unit_test_table.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_graphnode.dir/test_graphnode.cc.o -o unit_test_graphnode -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools ../libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libfftw3.so [ 17%] Building CXX object tools/src/tests/CMakeFiles/unit_test_table.dir/test_table.cc.o cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DTOOLS_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/tools/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT tools/src/tests/CMakeFiles/unit_test_table.dir/test_table.cc.o -MF CMakeFiles/unit_test_table.dir/test_table.cc.o.d -o CMakeFiles/unit_test_table.dir/test_table.cc.o -c /build/reproducible-path/votca-2022.1/tools/src/tests/test_table.cc +[ 17%] Linking CXX executable unit_test_graphnode +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_graphnode.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_graphnode.dir/test_graphnode.cc.o -o unit_test_graphnode -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools ../libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libfftw3.so make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' [ 17%] Built target unit_test_graphnode make -f tools/src/tests/CMakeFiles/unit_test_thread.dir/build.make tools/src/tests/CMakeFiles/unit_test_thread.dir/depend @@ -3595,13 +3629,17 @@ make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make -f tools/src/tests/CMakeFiles/unit_test_thread.dir/build.make tools/src/tests/CMakeFiles/unit_test_thread.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 17%] Linking CXX executable unit_test_graph_df_visitor -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_graph_df_visitor.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_graph_df_visitor.dir/test_graph_df_visitor.cc.o -o unit_test_graph_df_visitor -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools ../libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libfftw3.so [ 19%] Building CXX object tools/src/tests/CMakeFiles/unit_test_thread.dir/test_thread.cc.o cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DTOOLS_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/tools/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT tools/src/tests/CMakeFiles/unit_test_thread.dir/test_thread.cc.o -MF CMakeFiles/unit_test_thread.dir/test_thread.cc.o.d -o CMakeFiles/unit_test_thread.dir/test_thread.cc.o -c /build/reproducible-path/votca-2022.1/tools/src/tests/test_thread.cc +[ 19%] Building CXX object csg/src/libcsg/CMakeFiles/votca_csg.dir/map.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DGMX_DOUBLE=1 -DTMPI_USE_VISIBILITY -Dvotca_csg_EXPORTS -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT csg/src/libcsg/CMakeFiles/votca_csg.dir/map.cc.o -MF CMakeFiles/votca_csg.dir/map.cc.o.d -o CMakeFiles/votca_csg.dir/map.cc.o -c /build/reproducible-path/votca-2022.1/csg/src/libcsg/map.cc +[ 19%] Building CXX object csg/src/libcsg/CMakeFiles/votca_csg.dir/molecule.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DGMX_DOUBLE=1 -DTMPI_USE_VISIBILITY -Dvotca_csg_EXPORTS -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT csg/src/libcsg/CMakeFiles/votca_csg.dir/molecule.cc.o -MF CMakeFiles/votca_csg.dir/molecule.cc.o.d -o CMakeFiles/votca_csg.dir/molecule.cc.o -c /build/reproducible-path/votca-2022.1/csg/src/libcsg/molecule.cc +[ 19%] Linking CXX executable unit_test_graphalgorithm +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_graphalgorithm.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_graphalgorithm.dir/test_graphalgorithm.cc.o -o unit_test_graphalgorithm -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools ../libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libfftw3.so make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 19%] Built target unit_test_graph_df_visitor +[ 19%] Built target unit_test_graphalgorithm make -f tools/src/tests/CMakeFiles/unit_test_tokenizer.dir/build.make tools/src/tests/CMakeFiles/unit_test_tokenizer.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_tokenizer.dir/DependInfo.cmake --color= @@ -3610,26 +3648,24 @@ make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' [ 19%] Building CXX object tools/src/tests/CMakeFiles/unit_test_tokenizer.dir/test_tokenizer.cc.o cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DTOOLS_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/tools/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT tools/src/tests/CMakeFiles/unit_test_tokenizer.dir/test_tokenizer.cc.o -MF CMakeFiles/unit_test_tokenizer.dir/test_tokenizer.cc.o.d -o CMakeFiles/unit_test_tokenizer.dir/test_tokenizer.cc.o -c /build/reproducible-path/votca-2022.1/tools/src/tests/test_tokenizer.cc -[ 19%] Building CXX object csg/src/libcsg/CMakeFiles/votca_csg.dir/molecule.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DGMX_DOUBLE=1 -DTMPI_USE_VISIBILITY -Dvotca_csg_EXPORTS -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT csg/src/libcsg/CMakeFiles/votca_csg.dir/molecule.cc.o -MF CMakeFiles/votca_csg.dir/molecule.cc.o.d -o CMakeFiles/votca_csg.dir/molecule.cc.o -c /build/reproducible-path/votca-2022.1/csg/src/libcsg/molecule.cc -[ 19%] Linking CXX executable unit_test_graphalgorithm -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_graphalgorithm.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_graphalgorithm.dir/test_graphalgorithm.cc.o -o unit_test_graphalgorithm -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools ../libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libfftw3.so [ 20%] Linking CXX executable unit_test_graph_base cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_graph_base.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_graph_base.dir/test_graph_base.cc.o -o unit_test_graph_base -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools ../libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libfftw3.so make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 20%] Built target unit_test_graphalgorithm +[ 20%] Built target unit_test_graph_base make -f tools/src/tests/CMakeFiles/unit_test_random.dir/build.make tools/src/tests/CMakeFiles/unit_test_random.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_random.dir/DependInfo.cmake --color= +[ 20%] Linking CXX executable unit_test_objectfactory +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_objectfactory.dir/link.txt --verbose=1 make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make -f tools/src/tests/CMakeFiles/unit_test_random.dir/build.make tools/src/tests/CMakeFiles/unit_test_random.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_objectfactory.dir/test_objectfactory.cc.o -o unit_test_objectfactory -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools ../libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libfftw3.so [ 20%] Building CXX object tools/src/tests/CMakeFiles/unit_test_random.dir/test_random.cc.o cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DTOOLS_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/tools/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT tools/src/tests/CMakeFiles/unit_test_random.dir/test_random.cc.o -MF CMakeFiles/unit_test_random.dir/test_random.cc.o.d -o CMakeFiles/unit_test_random.dir/test_random.cc.o -c /build/reproducible-path/votca-2022.1/tools/src/tests/test_random.cc make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 20%] Built target unit_test_graph_base +[ 20%] Built target unit_test_objectfactory make -f tools/src/tests/CMakeFiles/unit_test_akimaspline.dir/build.make tools/src/tests/CMakeFiles/unit_test_akimaspline.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_akimaspline.dir/DependInfo.cmake --color= @@ -3645,64 +3681,64 @@ [ 20%] Linking CXX executable unit_test_structureparameters cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_structureparameters.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_structureparameters.dir/test_structureparameters.cc.o -o unit_test_structureparameters -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools ../libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libfftw3.so -[ 20%] Linking CXX executable unit_test_thread -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_thread.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_thread.dir/test_thread.cc.o -o unit_test_thread -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools ../libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libfftw3.so make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' [ 20%] Built target unit_test_structureparameters make -f tools/src/tests/CMakeFiles/unit_test_linspline.dir/build.make tools/src/tests/CMakeFiles/unit_test_linspline.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_linspline.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make -f tools/src/tests/CMakeFiles/unit_test_linspline.dir/build.make tools/src/tests/CMakeFiles/unit_test_linspline.dir/build -[ 20%] Built target unit_test_thread make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 20%] Building CXX object tools/src/tests/CMakeFiles/unit_test_linspline.dir/test_linspline.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DTOOLS_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/tools/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT tools/src/tests/CMakeFiles/unit_test_linspline.dir/test_linspline.cc.o -MF CMakeFiles/unit_test_linspline.dir/test_linspline.cc.o.d -o CMakeFiles/unit_test_linspline.dir/test_linspline.cc.o -c /build/reproducible-path/votca-2022.1/tools/src/tests/test_linspline.cc +[ 21%] Building CXX object csg/src/libcsg/CMakeFiles/votca_csg.dir/nblistgrid.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DGMX_DOUBLE=1 -DTMPI_USE_VISIBILITY -Dvotca_csg_EXPORTS -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT csg/src/libcsg/CMakeFiles/votca_csg.dir/nblistgrid.cc.o -MF CMakeFiles/votca_csg.dir/nblistgrid.cc.o.d -o CMakeFiles/votca_csg.dir/nblistgrid.cc.o -c /build/reproducible-path/votca-2022.1/csg/src/libcsg/nblistgrid.cc +[ 21%] Linking CXX executable unit_test_thread +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_thread.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_thread.dir/test_thread.cc.o -o unit_test_thread -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools ../libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libfftw3.so +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 21%] Built target unit_test_thread make -f tools/src/tests/CMakeFiles/unit_test_unitconverter.dir/build.make tools/src/tests/CMakeFiles/unit_test_unitconverter.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_unitconverter.dir/DependInfo.cmake --color= -[ 20%] Building CXX object tools/src/tests/CMakeFiles/unit_test_linspline.dir/test_linspline.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DTOOLS_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/tools/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT tools/src/tests/CMakeFiles/unit_test_linspline.dir/test_linspline.cc.o -MF CMakeFiles/unit_test_linspline.dir/test_linspline.cc.o.d -o CMakeFiles/unit_test_linspline.dir/test_linspline.cc.o -c /build/reproducible-path/votca-2022.1/tools/src/tests/test_linspline.cc make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make -f tools/src/tests/CMakeFiles/unit_test_unitconverter.dir/build.make tools/src/tests/CMakeFiles/unit_test_unitconverter.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 20%] Building CXX object tools/src/tests/CMakeFiles/unit_test_unitconverter.dir/test_unitconverter.cc.o +[ 21%] Building CXX object tools/src/tests/CMakeFiles/unit_test_unitconverter.dir/test_unitconverter.cc.o cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DTOOLS_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/tools/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT tools/src/tests/CMakeFiles/unit_test_unitconverter.dir/test_unitconverter.cc.o -MF CMakeFiles/unit_test_unitconverter.dir/test_unitconverter.cc.o.d -o CMakeFiles/unit_test_unitconverter.dir/test_unitconverter.cc.o -c /build/reproducible-path/votca-2022.1/tools/src/tests/test_unitconverter.cc -[ 21%] Building CXX object csg/src/libcsg/CMakeFiles/votca_csg.dir/nblistgrid.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DGMX_DOUBLE=1 -DTMPI_USE_VISIBILITY -Dvotca_csg_EXPORTS -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT csg/src/libcsg/CMakeFiles/votca_csg.dir/nblistgrid.cc.o -MF CMakeFiles/votca_csg.dir/nblistgrid.cc.o.d -o CMakeFiles/votca_csg.dir/nblistgrid.cc.o -c /build/reproducible-path/votca-2022.1/csg/src/libcsg/nblistgrid.cc -[ 21%] Building CXX object csg/src/libcsg/CMakeFiles/votca_csg.dir/nblistgrid_3body.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DGMX_DOUBLE=1 -DTMPI_USE_VISIBILITY -Dvotca_csg_EXPORTS -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT csg/src/libcsg/CMakeFiles/votca_csg.dir/nblistgrid_3body.cc.o -MF CMakeFiles/votca_csg.dir/nblistgrid_3body.cc.o.d -o CMakeFiles/votca_csg.dir/nblistgrid_3body.cc.o -c /build/reproducible-path/votca-2022.1/csg/src/libcsg/nblistgrid_3body.cc -[ 23%] Linking CXX executable unit_test_reducededge -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_reducededge.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_reducededge.dir/test_reducededge.cc.o -o unit_test_reducededge -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools ../libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libfftw3.so -[ 23%] Linking CXX executable unit_test_random -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_random.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_random.dir/test_random.cc.o -o unit_test_random -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools ../libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libfftw3.so +[ 21%] Linking CXX executable unit_test_table +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_table.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_table.dir/test_table.cc.o -o unit_test_table -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools ../libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libfftw3.so make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 23%] Built target unit_test_reducededge +[ 21%] Built target unit_test_table make -f tools/src/tests/CMakeFiles/unit_test_NDimVector.dir/build.make tools/src/tests/CMakeFiles/unit_test_NDimVector.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_NDimVector.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make -f tools/src/tests/CMakeFiles/unit_test_NDimVector.dir/build.make tools/src/tests/CMakeFiles/unit_test_NDimVector.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 23%] Building CXX object tools/src/tests/CMakeFiles/unit_test_NDimVector.dir/test_NDimVector.cc.o +[ 21%] Building CXX object tools/src/tests/CMakeFiles/unit_test_NDimVector.dir/test_NDimVector.cc.o cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DTOOLS_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/tools/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT tools/src/tests/CMakeFiles/unit_test_NDimVector.dir/test_NDimVector.cc.o -MF CMakeFiles/unit_test_NDimVector.dir/test_NDimVector.cc.o.d -o CMakeFiles/unit_test_NDimVector.dir/test_NDimVector.cc.o -c /build/reproducible-path/votca-2022.1/tools/src/tests/test_NDimVector.cc +[ 21%] Linking CXX executable unit_test_optionshandler +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_optionshandler.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_optionshandler.dir/test_optionshandler.cc.o -o unit_test_optionshandler -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools ../libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libfftw3.so +[ 23%] Linking CXX executable unit_test_reducededge +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_reducededge.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_reducededge.dir/test_reducededge.cc.o -o unit_test_reducededge -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools ../libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libfftw3.so make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 23%] Built target unit_test_random +[ 23%] Built target unit_test_optionshandler make -f tools/src/tests/CMakeFiles/unit_test_eigenio_matrixmarket.dir/build.make tools/src/tests/CMakeFiles/unit_test_eigenio_matrixmarket.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_eigenio_matrixmarket.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make -f tools/src/tests/CMakeFiles/unit_test_eigenio_matrixmarket.dir/build.make tools/src/tests/CMakeFiles/unit_test_eigenio_matrixmarket.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 23%] Building CXX object csg/src/libcsg/CMakeFiles/votca_csg.dir/nblistgrid_3body.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DGMX_DOUBLE=1 -DTMPI_USE_VISIBILITY -Dvotca_csg_EXPORTS -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT csg/src/libcsg/CMakeFiles/votca_csg.dir/nblistgrid_3body.cc.o -MF CMakeFiles/votca_csg.dir/nblistgrid_3body.cc.o.d -o CMakeFiles/votca_csg.dir/nblistgrid_3body.cc.o -c /build/reproducible-path/votca-2022.1/csg/src/libcsg/nblistgrid_3body.cc [ 23%] Building CXX object tools/src/tests/CMakeFiles/unit_test_eigenio_matrixmarket.dir/test_eigenio_matrixmarket.cc.o cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DTOOLS_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/tools/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT tools/src/tests/CMakeFiles/unit_test_eigenio_matrixmarket.dir/test_eigenio_matrixmarket.cc.o -MF CMakeFiles/unit_test_eigenio_matrixmarket.dir/test_eigenio_matrixmarket.cc.o.d -o CMakeFiles/unit_test_eigenio_matrixmarket.dir/test_eigenio_matrixmarket.cc.o -c /build/reproducible-path/votca-2022.1/tools/src/tests/test_eigenio_matrixmarket.cc -[ 23%] Linking CXX executable unit_test_optionshandler -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_optionshandler.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_optionshandler.dir/test_optionshandler.cc.o -o unit_test_optionshandler -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools ../libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libfftw3.so make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 23%] Built target unit_test_optionshandler +[ 23%] Built target unit_test_reducededge make -f tools/src/tools/CMakeFiles/votca_property_manpage.dir/build.make tools/src/tools/CMakeFiles/votca_property_manpage.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/tools/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tools/CMakeFiles/votca_property_manpage.dir/DependInfo.cmake --color= @@ -3712,73 +3748,73 @@ [ 23%] Building votca_property manpage cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tools && ../../scripts/votca_help2doc --name votca_property --format groff --out votca_property.man make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 23%] Linking CXX executable unit_test_akimaspline -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_akimaspline.dir/link.txt --verbose=1 [ 23%] Built target votca_property_manpage [ 23%] Building CXX object csg/src/libcsg/CMakeFiles/votca_csg.dir/nematicorder.cc.o cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DGMX_DOUBLE=1 -DTMPI_USE_VISIBILITY -Dvotca_csg_EXPORTS -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT csg/src/libcsg/CMakeFiles/votca_csg.dir/nematicorder.cc.o -MF CMakeFiles/votca_csg.dir/nematicorder.cc.o.d -o CMakeFiles/votca_csg.dir/nematicorder.cc.o -c /build/reproducible-path/votca-2022.1/csg/src/libcsg/nematicorder.cc -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_akimaspline.dir/test_akimaspline.cc.o -o unit_test_akimaspline -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools ../libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libfftw3.so +[ 23%] Linking CXX executable unit_test_random +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_random.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_random.dir/test_random.cc.o -o unit_test_random -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools ../libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libfftw3.so make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 23%] Built target unit_test_akimaspline +[ 23%] Built target unit_test_random [ 23%] Building CXX object csg/src/libcsg/CMakeFiles/votca_csg.dir/openbox.cc.o cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DGMX_DOUBLE=1 -DTMPI_USE_VISIBILITY -Dvotca_csg_EXPORTS -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT csg/src/libcsg/CMakeFiles/votca_csg.dir/openbox.cc.o -MF CMakeFiles/votca_csg.dir/openbox.cc.o.d -o CMakeFiles/votca_csg.dir/openbox.cc.o -c /build/reproducible-path/votca-2022.1/csg/src/libcsg/openbox.cc +[ 23%] Linking CXX executable unit_test_akimaspline +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_akimaspline.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_akimaspline.dir/test_akimaspline.cc.o -o unit_test_akimaspline -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools ../libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libfftw3.so +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 23%] Built target unit_test_akimaspline [ 23%] Building CXX object csg/src/libcsg/CMakeFiles/votca_csg.dir/orthorhombicbox.cc.o cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DGMX_DOUBLE=1 -DTMPI_USE_VISIBILITY -Dvotca_csg_EXPORTS -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT csg/src/libcsg/CMakeFiles/votca_csg.dir/orthorhombicbox.cc.o -MF CMakeFiles/votca_csg.dir/orthorhombicbox.cc.o.d -o CMakeFiles/votca_csg.dir/orthorhombicbox.cc.o -c /build/reproducible-path/votca-2022.1/csg/src/libcsg/orthorhombicbox.cc -[ 23%] Linking CXX executable unit_test_tokenizer -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_tokenizer.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_tokenizer.dir/test_tokenizer.cc.o -o unit_test_tokenizer -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools ../libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libfftw3.so -[ 23%] Linking CXX executable unit_test_table -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_table.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_table.dir/test_table.cc.o -o unit_test_table -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools ../libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libfftw3.so -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' [ 23%] Linking CXX executable unit_test_property cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_property.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_property.dir/test_property.cc.o -o unit_test_property -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools ../libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libfftw3.so -[ 23%] Built target unit_test_tokenizer +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 23%] Built target unit_test_property [ 23%] Building CXX object csg/src/libcsg/CMakeFiles/votca_csg.dir/potentialfunctions/potentialfunction.cc.o cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DGMX_DOUBLE=1 -DTMPI_USE_VISIBILITY -Dvotca_csg_EXPORTS -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT csg/src/libcsg/CMakeFiles/votca_csg.dir/potentialfunctions/potentialfunction.cc.o -MF CMakeFiles/votca_csg.dir/potentialfunctions/potentialfunction.cc.o.d -o CMakeFiles/votca_csg.dir/potentialfunctions/potentialfunction.cc.o -c /build/reproducible-path/votca-2022.1/csg/src/libcsg/potentialfunctions/potentialfunction.cc +[ 23%] Linking CXX executable unit_test_unitconverter +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_unitconverter.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_unitconverter.dir/test_unitconverter.cc.o -o unit_test_unitconverter -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools ../libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libfftw3.so make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 23%] Built target unit_test_table +[ 23%] Built target unit_test_unitconverter [ 23%] Building CXX object csg/src/libcsg/CMakeFiles/votca_csg.dir/potentialfunctions/potentialfunctioncbspl.cc.o cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DGMX_DOUBLE=1 -DTMPI_USE_VISIBILITY -Dvotca_csg_EXPORTS -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT csg/src/libcsg/CMakeFiles/votca_csg.dir/potentialfunctions/potentialfunctioncbspl.cc.o -MF CMakeFiles/votca_csg.dir/potentialfunctions/potentialfunctioncbspl.cc.o.d -o CMakeFiles/votca_csg.dir/potentialfunctions/potentialfunctioncbspl.cc.o -c /build/reproducible-path/votca-2022.1/csg/src/libcsg/potentialfunctions/potentialfunctioncbspl.cc +[ 23%] Linking CXX executable unit_test_linspline +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_linspline.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_linspline.dir/test_linspline.cc.o -o unit_test_linspline -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools ../libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libfftw3.so make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 23%] Built target unit_test_property +[ 23%] Built target unit_test_linspline [ 23%] Building CXX object csg/src/libcsg/CMakeFiles/votca_csg.dir/potentialfunctions/potentialfunctionlj126.cc.o cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DGMX_DOUBLE=1 -DTMPI_USE_VISIBILITY -Dvotca_csg_EXPORTS -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT csg/src/libcsg/CMakeFiles/votca_csg.dir/potentialfunctions/potentialfunctionlj126.cc.o -MF CMakeFiles/votca_csg.dir/potentialfunctions/potentialfunctionlj126.cc.o.d -o CMakeFiles/votca_csg.dir/potentialfunctions/potentialfunctionlj126.cc.o -c /build/reproducible-path/votca-2022.1/csg/src/libcsg/potentialfunctions/potentialfunctionlj126.cc -[ 23%] Linking CXX executable unit_test_unitconverter -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_unitconverter.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_unitconverter.dir/test_unitconverter.cc.o -o unit_test_unitconverter -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools ../libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libfftw3.so -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 23%] Built target unit_test_unitconverter +[ 23%] Linking CXX executable unit_test_tokenizer +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_tokenizer.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_tokenizer.dir/test_tokenizer.cc.o -o unit_test_tokenizer -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools ../libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libfftw3.so [ 24%] Building CXX object csg/src/libcsg/CMakeFiles/votca_csg.dir/potentialfunctions/potentialfunctionljg.cc.o cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DGMX_DOUBLE=1 -DTMPI_USE_VISIBILITY -Dvotca_csg_EXPORTS -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT csg/src/libcsg/CMakeFiles/votca_csg.dir/potentialfunctions/potentialfunctionljg.cc.o -MF CMakeFiles/votca_csg.dir/potentialfunctions/potentialfunctionljg.cc.o.d -o CMakeFiles/votca_csg.dir/potentialfunctions/potentialfunctionljg.cc.o -c /build/reproducible-path/votca-2022.1/csg/src/libcsg/potentialfunctions/potentialfunctionljg.cc +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 24%] Built target unit_test_tokenizer [ 24%] Building CXX object csg/src/libcsg/CMakeFiles/votca_csg.dir/topology.cc.o cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DGMX_DOUBLE=1 -DTMPI_USE_VISIBILITY -Dvotca_csg_EXPORTS -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT csg/src/libcsg/CMakeFiles/votca_csg.dir/topology.cc.o -MF CMakeFiles/votca_csg.dir/topology.cc.o.d -o CMakeFiles/votca_csg.dir/topology.cc.o -c /build/reproducible-path/votca-2022.1/csg/src/libcsg/topology.cc -[ 24%] Linking CXX executable unit_test_linspline -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_linspline.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_linspline.dir/test_linspline.cc.o -o unit_test_linspline -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools ../libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libfftw3.so -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 24%] Built target unit_test_linspline -[ 24%] Building CXX object csg/src/libcsg/CMakeFiles/votca_csg.dir/topologymap.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DGMX_DOUBLE=1 -DTMPI_USE_VISIBILITY -Dvotca_csg_EXPORTS -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT csg/src/libcsg/CMakeFiles/votca_csg.dir/topologymap.cc.o -MF CMakeFiles/votca_csg.dir/topologymap.cc.o.d -o CMakeFiles/votca_csg.dir/topologymap.cc.o -c /build/reproducible-path/votca-2022.1/csg/src/libcsg/topologymap.cc -[ 24%] Linking CXX executable unit_test_reducedgraph -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_reducedgraph.dir/link.txt --verbose=1 [ 26%] Linking CXX executable unit_test_NDimVector -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_reducedgraph.dir/test_reducedgraph.cc.o -o unit_test_reducedgraph -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools ../libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libfftw3.so cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_NDimVector.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_NDimVector.dir/test_NDimVector.cc.o -o unit_test_NDimVector -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools ../libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libfftw3.so make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' [ 26%] Built target unit_test_NDimVector -[ 26%] Built target unit_test_reducedgraph +[ 26%] Building CXX object csg/src/libcsg/CMakeFiles/votca_csg.dir/topologymap.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DGMX_DOUBLE=1 -DTMPI_USE_VISIBILITY -Dvotca_csg_EXPORTS -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT csg/src/libcsg/CMakeFiles/votca_csg.dir/topologymap.cc.o -MF CMakeFiles/votca_csg.dir/topologymap.cc.o.d -o CMakeFiles/votca_csg.dir/topologymap.cc.o -c /build/reproducible-path/votca-2022.1/csg/src/libcsg/topologymap.cc [ 26%] Building CXX object csg/src/libcsg/CMakeFiles/votca_csg.dir/topologyreader.cc.o cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DGMX_DOUBLE=1 -DTMPI_USE_VISIBILITY -Dvotca_csg_EXPORTS -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT csg/src/libcsg/CMakeFiles/votca_csg.dir/topologyreader.cc.o -MF CMakeFiles/votca_csg.dir/topologyreader.cc.o.d -o CMakeFiles/votca_csg.dir/topologyreader.cc.o -c /build/reproducible-path/votca-2022.1/csg/src/libcsg/topologyreader.cc [ 26%] Building CXX object csg/src/libcsg/CMakeFiles/votca_csg.dir/trajectoryreader.cc.o cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DGMX_DOUBLE=1 -DTMPI_USE_VISIBILITY -Dvotca_csg_EXPORTS -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT csg/src/libcsg/CMakeFiles/votca_csg.dir/trajectoryreader.cc.o -MF CMakeFiles/votca_csg.dir/trajectoryreader.cc.o.d -o CMakeFiles/votca_csg.dir/trajectoryreader.cc.o -c /build/reproducible-path/votca-2022.1/csg/src/libcsg/trajectoryreader.cc [ 26%] Building CXX object csg/src/libcsg/CMakeFiles/votca_csg.dir/trajectorywriter.cc.o cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DGMX_DOUBLE=1 -DTMPI_USE_VISIBILITY -Dvotca_csg_EXPORTS -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT csg/src/libcsg/CMakeFiles/votca_csg.dir/trajectorywriter.cc.o -MF CMakeFiles/votca_csg.dir/trajectorywriter.cc.o.d -o CMakeFiles/votca_csg.dir/trajectorywriter.cc.o -c /build/reproducible-path/votca-2022.1/csg/src/libcsg/trajectorywriter.cc +[ 26%] Linking CXX executable unit_test_reducedgraph +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_reducedgraph.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_reducedgraph.dir/test_reducedgraph.cc.o -o unit_test_reducedgraph -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools ../libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libfftw3.so [ 26%] Building CXX object csg/src/libcsg/CMakeFiles/votca_csg.dir/triclinicbox.cc.o cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DGMX_DOUBLE=1 -DTMPI_USE_VISIBILITY -Dvotca_csg_EXPORTS -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT csg/src/libcsg/CMakeFiles/votca_csg.dir/triclinicbox.cc.o -MF CMakeFiles/votca_csg.dir/triclinicbox.cc.o.d -o CMakeFiles/votca_csg.dir/triclinicbox.cc.o -c /build/reproducible-path/votca-2022.1/csg/src/libcsg/triclinicbox.cc +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 26%] Built target unit_test_reducedgraph [ 26%] Building CXX object csg/src/libcsg/CMakeFiles/votca_csg.dir/version.cc.o cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DGMX_DOUBLE=1 -DTMPI_USE_VISIBILITY -Dvotca_csg_EXPORTS -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT csg/src/libcsg/CMakeFiles/votca_csg.dir/version.cc.o -MF CMakeFiles/votca_csg.dir/version.cc.o.d -o CMakeFiles/votca_csg.dir/version.cc.o -c /build/reproducible-path/votca-2022.1/csg/src/libcsg/version.cc /build/reproducible-path/votca-2022.1/csg/src/libcsg/version.cc:45:54: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] @@ -3789,17 +3825,17 @@ | ^~~~~~~~ [ 27%] Building CXX object csg/src/libcsg/CMakeFiles/votca_csg.dir/modules/io/dlpolytopologyreader.cc.o cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DGMX_DOUBLE=1 -DTMPI_USE_VISIBILITY -Dvotca_csg_EXPORTS -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT csg/src/libcsg/CMakeFiles/votca_csg.dir/modules/io/dlpolytopologyreader.cc.o -MF CMakeFiles/votca_csg.dir/modules/io/dlpolytopologyreader.cc.o.d -o CMakeFiles/votca_csg.dir/modules/io/dlpolytopologyreader.cc.o -c /build/reproducible-path/votca-2022.1/csg/src/libcsg/modules/io/dlpolytopologyreader.cc +[ 27%] Linking CXX executable unit_test_eigenio_matrixmarket +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_eigenio_matrixmarket.dir/link.txt --verbose=1 [ 27%] Building CXX object csg/src/libcsg/CMakeFiles/votca_csg.dir/modules/io/dlpolytrajectoryreader.cc.o cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DGMX_DOUBLE=1 -DTMPI_USE_VISIBILITY -Dvotca_csg_EXPORTS -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT csg/src/libcsg/CMakeFiles/votca_csg.dir/modules/io/dlpolytrajectoryreader.cc.o -MF CMakeFiles/votca_csg.dir/modules/io/dlpolytrajectoryreader.cc.o.d -o CMakeFiles/votca_csg.dir/modules/io/dlpolytrajectoryreader.cc.o -c /build/reproducible-path/votca-2022.1/csg/src/libcsg/modules/io/dlpolytrajectoryreader.cc +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_eigenio_matrixmarket.dir/test_eigenio_matrixmarket.cc.o -o unit_test_eigenio_matrixmarket -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools ../libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libfftw3.so +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 27%] Built target unit_test_eigenio_matrixmarket [ 27%] Building CXX object csg/src/libcsg/CMakeFiles/votca_csg.dir/modules/io/dlpolytrajectorywriter.cc.o cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DGMX_DOUBLE=1 -DTMPI_USE_VISIBILITY -Dvotca_csg_EXPORTS -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT csg/src/libcsg/CMakeFiles/votca_csg.dir/modules/io/dlpolytrajectorywriter.cc.o -MF CMakeFiles/votca_csg.dir/modules/io/dlpolytrajectorywriter.cc.o.d -o CMakeFiles/votca_csg.dir/modules/io/dlpolytrajectorywriter.cc.o -c /build/reproducible-path/votca-2022.1/csg/src/libcsg/modules/io/dlpolytrajectorywriter.cc [ 27%] Building CXX object csg/src/libcsg/CMakeFiles/votca_csg.dir/modules/io/groreader.cc.o cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DGMX_DOUBLE=1 -DTMPI_USE_VISIBILITY -Dvotca_csg_EXPORTS -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT csg/src/libcsg/CMakeFiles/votca_csg.dir/modules/io/groreader.cc.o -MF CMakeFiles/votca_csg.dir/modules/io/groreader.cc.o.d -o CMakeFiles/votca_csg.dir/modules/io/groreader.cc.o -c /build/reproducible-path/votca-2022.1/csg/src/libcsg/modules/io/groreader.cc -[ 27%] Linking CXX executable unit_test_eigenio_matrixmarket -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_eigenio_matrixmarket.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_eigenio_matrixmarket.dir/test_eigenio_matrixmarket.cc.o -o unit_test_eigenio_matrixmarket -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools ../libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libfftw3.so -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 27%] Built target unit_test_eigenio_matrixmarket [ 27%] Building CXX object csg/src/libcsg/CMakeFiles/votca_csg.dir/modules/io/growriter.cc.o cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_REGEX_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DGMX_DOUBLE=1 -DTMPI_USE_VISIBILITY -Dvotca_csg_EXPORTS -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT csg/src/libcsg/CMakeFiles/votca_csg.dir/modules/io/growriter.cc.o -MF CMakeFiles/votca_csg.dir/modules/io/growriter.cc.o.d -o CMakeFiles/votca_csg.dir/modules/io/growriter.cc.o -c /build/reproducible-path/votca-2022.1/csg/src/libcsg/modules/io/growriter.cc [ 27%] Building CXX object csg/src/libcsg/CMakeFiles/votca_csg.dir/modules/io/lammpsdatareader.cc.o @@ -3835,103 +3871,150 @@ make -f xtp/src/libxtp/CMakeFiles/votca_xtp.dir/build.make xtp/src/libxtp/CMakeFiles/votca_xtp.dir/depend make -f csg/src/tools/CMakeFiles/csg_reupdate.dir/build.make csg/src/tools/CMakeFiles/csg_reupdate.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f csg/src/tools/CMakeFiles/csg_map.dir/build.make csg/src/tools/CMakeFiles/csg_map.dir/depend -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/libxtp /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp/CMakeFiles/votca_xtp.dir/DependInfo.cmake --color= +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f csg/src/tools/CMakeFiles/csg_map.dir/build.make csg/src/tools/CMakeFiles/csg_map.dir/depend cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/CMakeFiles/csg_reupdate.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f csg/src/tools/CMakeFiles/csg_dump.dir/build.make csg/src/tools/CMakeFiles/csg_dump.dir/depend cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/CMakeFiles/csg_map.dir/DependInfo.cmake --color= +make -f csg/src/tools/CMakeFiles/csg_dump.dir/build.make csg/src/tools/CMakeFiles/csg_dump.dir/depend +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f xtp/src/libxtp/CMakeFiles/votca_xtp.dir/build.make xtp/src/libxtp/CMakeFiles/votca_xtp.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f csg/src/tools/CMakeFiles/csg_property.dir/build.make csg/src/tools/CMakeFiles/csg_property.dir/depend +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/CMakeFiles/csg_dump.dir/DependInfo.cmake --color= +make -f csg/src/tools/CMakeFiles/csg_reupdate.dir/build.make csg/src/tools/CMakeFiles/csg_reupdate.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/CMakeFiles/csg_property.dir/DependInfo.cmake --color= -make -f csg/src/tools/CMakeFiles/csg_resample.dir/build.make csg/src/tools/CMakeFiles/csg_resample.dir/depend -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f csg/src/tools/CMakeFiles/csg_stat.dir/build.make csg/src/tools/CMakeFiles/csg_stat.dir/depend make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/CMakeFiles/csg_resample.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make -f csg/src/tools/CMakeFiles/csg_map.dir/build.make csg/src/tools/CMakeFiles/csg_map.dir/build -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/CMakeFiles/csg_stat.dir/DependInfo.cmake --color= -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f csg/src/tools/CMakeFiles/csg_reupdate.dir/build.make csg/src/tools/CMakeFiles/csg_reupdate.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f csg/src/tools/CMakeFiles/csg_property.dir/build.make csg/src/tools/CMakeFiles/csg_property.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/src/libxtp/CMakeFiles/votca_xtp.dir/build.make xtp/src/libxtp/CMakeFiles/votca_xtp.dir/build -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/CMakeFiles/csg_property.dir/DependInfo.cmake --color= make -f csg/src/tools/CMakeFiles/csg_dump.dir/build.make csg/src/tools/CMakeFiles/csg_dump.dir/build +[ 30%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/GaussianQuadratureBase.cc.o +[ 30%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/ImaginaryAxisIntegration.cc.o +make -f csg/src/tools/CMakeFiles/csg_resample.dir/build.make csg/src/tools/CMakeFiles/csg_resample.dir/depend +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/GaussianQuadratureBase.cc.o -MF CMakeFiles/votca_xtp.dir/GaussianQuadratureBase.cc.o.d -o CMakeFiles/votca_xtp.dir/GaussianQuadratureBase.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/GaussianQuadratureBase.cc +[ 30%] Building CXX object csg/src/tools/CMakeFiles/csg_reupdate.dir/csg_reupdate.cc.o make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f csg/src/tools/CMakeFiles/csg_property.dir/build.make csg/src/tools/CMakeFiles/csg_property.dir/build +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/CMakeFiles/csg_resample.dir/DependInfo.cmake --color= +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT csg/src/tools/CMakeFiles/csg_reupdate.dir/csg_reupdate.cc.o -MF CMakeFiles/csg_reupdate.dir/csg_reupdate.cc.o.d -o CMakeFiles/csg_reupdate.dir/csg_reupdate.cc.o -c /build/reproducible-path/votca-2022.1/csg/src/tools/csg_reupdate.cc make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f csg/src/tools/CMakeFiles/csg_stat.dir/build.make csg/src/tools/CMakeFiles/csg_stat.dir/depend +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/ImaginaryAxisIntegration.cc.o -MF CMakeFiles/votca_xtp.dir/ImaginaryAxisIntegration.cc.o.d -o CMakeFiles/votca_xtp.dir/ImaginaryAxisIntegration.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/ImaginaryAxisIntegration.cc +[ 30%] Building CXX object csg/src/tools/CMakeFiles/csg_map.dir/csg_map.cc.o make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/CMakeFiles/csg_stat.dir/DependInfo.cmake --color= make -f csg/src/tools/CMakeFiles/csg_fmatch.dir/build.make csg/src/tools/CMakeFiles/csg_fmatch.dir/depend -[ 30%] Building CXX object csg/src/tools/CMakeFiles/csg_map.dir/csg_map.cc.o cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT csg/src/tools/CMakeFiles/csg_map.dir/csg_map.cc.o -MF CMakeFiles/csg_map.dir/csg_map.cc.o.d -o CMakeFiles/csg_map.dir/csg_map.cc.o -c /build/reproducible-path/votca-2022.1/csg/src/tools/csg_map.cc -[ 30%] Building CXX object csg/src/tools/CMakeFiles/csg_reupdate.dir/csg_reupdate.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT csg/src/tools/CMakeFiles/csg_reupdate.dir/csg_reupdate.cc.o -MF CMakeFiles/csg_reupdate.dir/csg_reupdate.cc.o.d -o CMakeFiles/csg_reupdate.dir/csg_reupdate.cc.o -c /build/reproducible-path/votca-2022.1/csg/src/tools/csg_reupdate.cc make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f csg/src/tools/CMakeFiles/csg_resample.dir/build.make csg/src/tools/CMakeFiles/csg_resample.dir/build -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/CMakeFiles/csg_fmatch.dir/DependInfo.cmake --color= make -f csg/src/tools/CMakeFiles/csg_gmxtopol.dir/build.make csg/src/tools/CMakeFiles/csg_gmxtopol.dir/depend -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/CMakeFiles/csg_fmatch.dir/DependInfo.cmake --color= +[ 31%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/IndexParser.cc.o +[ 31%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/anderson_mixing.cc.o make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/IndexParser.cc.o -MF CMakeFiles/votca_xtp.dir/IndexParser.cc.o.d -o CMakeFiles/votca_xtp.dir/IndexParser.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/IndexParser.cc +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f csg/src/tools/CMakeFiles/csg_property.dir/build.make csg/src/tools/CMakeFiles/csg_property.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 31%] Building CXX object csg/src/tools/CMakeFiles/csg_dump.dir/csg_dump.cc.o cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/CMakeFiles/csg_gmxtopol.dir/DependInfo.cmake --color= -make -f csg/src/tools/CMakeFiles/csg_stat.dir/build.make csg/src/tools/CMakeFiles/csg_stat.dir/build -[ 30%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/GaussianQuadratureBase.cc.o -[ 30%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/ImaginaryAxisIntegration.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/ImaginaryAxisIntegration.cc.o -MF CMakeFiles/votca_xtp.dir/ImaginaryAxisIntegration.cc.o.d -o CMakeFiles/votca_xtp.dir/ImaginaryAxisIntegration.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/ImaginaryAxisIntegration.cc -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f csg/src/tools/CMakeFiles/csg_dlptopol.dir/build.make csg/src/tools/CMakeFiles/csg_dlptopol.dir/depend -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/GaussianQuadratureBase.cc.o -MF CMakeFiles/votca_xtp.dir/GaussianQuadratureBase.cc.o.d -o CMakeFiles/votca_xtp.dir/GaussianQuadratureBase.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/GaussianQuadratureBase.cc -[ 30%] Building CXX object csg/src/tools/CMakeFiles/csg_property.dir/csg_property.cc.o -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/CMakeFiles/csg_dlptopol.dir/DependInfo.cmake --color= -make -f csg/src/tools/CMakeFiles/csg_density.dir/build.make csg/src/tools/CMakeFiles/csg_density.dir/depend -[ 30%] Building CXX object csg/src/tools/CMakeFiles/csg_dump.dir/csg_dump.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT csg/src/tools/CMakeFiles/csg_property.dir/csg_property.cc.o -MF CMakeFiles/csg_property.dir/csg_property.cc.o.d -o CMakeFiles/csg_property.dir/csg_property.cc.o -c /build/reproducible-path/votca-2022.1/csg/src/tools/csg_property.cc -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/CMakeFiles/csg_density.dir/DependInfo.cmake --color= -[ 31%] Building CXX object csg/src/tools/CMakeFiles/csg_resample.dir/csg_resample.cc.o cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT csg/src/tools/CMakeFiles/csg_dump.dir/csg_dump.cc.o -MF CMakeFiles/csg_dump.dir/csg_dump.cc.o.d -o CMakeFiles/csg_dump.dir/csg_dump.cc.o -c /build/reproducible-path/votca-2022.1/csg/src/tools/csg_dump.cc -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT csg/src/tools/CMakeFiles/csg_resample.dir/csg_resample.cc.o -MF CMakeFiles/csg_resample.dir/csg_resample.cc.o.d -o CMakeFiles/csg_resample.dir/csg_resample.cc.o -c /build/reproducible-path/votca-2022.1/csg/src/tools/csg_resample.cc -[ 31%] Building CXX object csg/src/tools/CMakeFiles/csg_stat.dir/csg_stat.cc.o -[ 32%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/IndexParser.cc.o -[ 32%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/anderson_mixing.cc.o -make -f csg/src/tools/CMakeFiles/csg_fmatch.dir/build.make csg/src/tools/CMakeFiles/csg_fmatch.dir/build -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT csg/src/tools/CMakeFiles/csg_stat.dir/csg_stat.cc.o -MF CMakeFiles/csg_stat.dir/csg_stat.cc.o.d -o CMakeFiles/csg_stat.dir/csg_stat.cc.o -c /build/reproducible-path/votca-2022.1/csg/src/tools/csg_stat.cc make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 31%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/aobasis.cc.o +make -f csg/src/tools/CMakeFiles/csg_resample.dir/build.make csg/src/tools/CMakeFiles/csg_resample.dir/build cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/anderson_mixing.cc.o -MF CMakeFiles/votca_xtp.dir/anderson_mixing.cc.o.d -o CMakeFiles/votca_xtp.dir/anderson_mixing.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/anderson_mixing.cc -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/IndexParser.cc.o -MF CMakeFiles/votca_xtp.dir/IndexParser.cc.o.d -o CMakeFiles/votca_xtp.dir/IndexParser.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/IndexParser.cc -[ 32%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/aobasis.cc.o make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f csg/src/tools/CMakeFiles/csg_gmxtopol.dir/build.make csg/src/tools/CMakeFiles/csg_gmxtopol.dir/build -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/aobasis.cc.o -MF CMakeFiles/votca_xtp.dir/aobasis.cc.o.d -o CMakeFiles/votca_xtp.dir/aobasis.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/aobasis.cc make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f csg/src/tools/CMakeFiles/csg_stat.dir/build.make csg/src/tools/CMakeFiles/csg_stat.dir/build +[ 31%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/aomatrices/aoecp.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/aobasis.cc.o -MF CMakeFiles/votca_xtp.dir/aobasis.cc.o.d -o CMakeFiles/votca_xtp.dir/aobasis.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/aobasis.cc make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f csg/src/tools/CMakeFiles/csg_dlptopol.dir/build.make csg/src/tools/CMakeFiles/csg_dlptopol.dir/build -[ 32%] Building CXX object csg/src/tools/CMakeFiles/csg_stat.dir/csg_stat_imc.cc.o make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT csg/src/tools/CMakeFiles/csg_stat.dir/csg_stat_imc.cc.o -MF CMakeFiles/csg_stat.dir/csg_stat_imc.cc.o.d -o CMakeFiles/csg_stat.dir/csg_stat_imc.cc.o -c /build/reproducible-path/votca-2022.1/csg/src/tools/csg_stat_imc.cc +make -f csg/src/tools/CMakeFiles/csg_fmatch.dir/build.make csg/src/tools/CMakeFiles/csg_fmatch.dir/build +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/aomatrices/aoecp.cc.o -MF CMakeFiles/votca_xtp.dir/aomatrices/aoecp.cc.o.d -o CMakeFiles/votca_xtp.dir/aomatrices/aoecp.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/aomatrices/aoecp.cc +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f csg/src/tools/CMakeFiles/csg_dlptopol.dir/build.make csg/src/tools/CMakeFiles/csg_dlptopol.dir/depend +[ 31%] Building CXX object csg/src/tools/CMakeFiles/csg_property.dir/csg_property.cc.o make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f csg/src/tools/CMakeFiles/csg_density.dir/build.make csg/src/tools/CMakeFiles/csg_density.dir/build +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT csg/src/tools/CMakeFiles/csg_property.dir/csg_property.cc.o -MF CMakeFiles/csg_property.dir/csg_property.cc.o.d -o CMakeFiles/csg_property.dir/csg_property.cc.o -c /build/reproducible-path/votca-2022.1/csg/src/tools/csg_property.cc +[ 32%] Building CXX object csg/src/tools/CMakeFiles/csg_resample.dir/csg_resample.cc.o make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/CMakeFiles/csg_dlptopol.dir/DependInfo.cmake --color= +make -f csg/src/tools/CMakeFiles/csg_gmxtopol.dir/build.make csg/src/tools/CMakeFiles/csg_gmxtopol.dir/build +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT csg/src/tools/CMakeFiles/csg_resample.dir/csg_resample.cc.o -MF CMakeFiles/csg_resample.dir/csg_resample.cc.o.d -o CMakeFiles/csg_resample.dir/csg_resample.cc.o -c /build/reproducible-path/votca-2022.1/csg/src/tools/csg_resample.cc +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 32%] Building CXX object csg/src/tools/CMakeFiles/csg_stat.dir/csg_stat.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT csg/src/tools/CMakeFiles/csg_stat.dir/csg_stat.cc.o -MF CMakeFiles/csg_stat.dir/csg_stat.cc.o.d -o CMakeFiles/csg_stat.dir/csg_stat.cc.o -c /build/reproducible-path/votca-2022.1/csg/src/tools/csg_stat.cc [ 32%] Building CXX object csg/src/tools/CMakeFiles/csg_fmatch.dir/csg_fmatch.cc.o -[ 32%] Building CXX object csg/src/tools/CMakeFiles/csg_gmxtopol.dir/csg_gmxtopol.cc.o +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f csg/src/tools/CMakeFiles/csg_dlptopol.dir/build.make csg/src/tools/CMakeFiles/csg_dlptopol.dir/build cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT csg/src/tools/CMakeFiles/csg_fmatch.dir/csg_fmatch.cc.o -MF CMakeFiles/csg_fmatch.dir/csg_fmatch.cc.o.d -o CMakeFiles/csg_fmatch.dir/csg_fmatch.cc.o -c /build/reproducible-path/votca-2022.1/csg/src/tools/csg_fmatch.cc +[ 32%] Building CXX object csg/src/tools/CMakeFiles/csg_gmxtopol.dir/csg_gmxtopol.cc.o +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT csg/src/tools/CMakeFiles/csg_gmxtopol.dir/csg_gmxtopol.cc.o -MF CMakeFiles/csg_gmxtopol.dir/csg_gmxtopol.cc.o.d -o CMakeFiles/csg_gmxtopol.dir/csg_gmxtopol.cc.o -c /build/reproducible-path/votca-2022.1/csg/src/tools/csg_gmxtopol.cc [ 32%] Building CXX object csg/src/tools/CMakeFiles/csg_dlptopol.dir/csg_dlptopol.cc.o cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT csg/src/tools/CMakeFiles/csg_dlptopol.dir/csg_dlptopol.cc.o -MF CMakeFiles/csg_dlptopol.dir/csg_dlptopol.cc.o.d -o CMakeFiles/csg_dlptopol.dir/csg_dlptopol.cc.o -c /build/reproducible-path/votca-2022.1/csg/src/tools/csg_dlptopol.cc -[ 32%] Building CXX object csg/src/tools/CMakeFiles/csg_density.dir/csg_density.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT csg/src/tools/CMakeFiles/csg_density.dir/csg_density.cc.o -MF CMakeFiles/csg_density.dir/csg_density.cc.o.d -o CMakeFiles/csg_density.dir/csg_density.cc.o -c /build/reproducible-path/votca-2022.1/csg/src/tools/csg_density.cc -[ 32%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/aomatrices/aoecp.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/aomatrices/aoecp.cc.o -MF CMakeFiles/votca_xtp.dir/aomatrices/aoecp.cc.o.d -o CMakeFiles/votca_xtp.dir/aomatrices/aoecp.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/aomatrices/aoecp.cc +[ 32%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/aomatrices/aomatrix.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/aomatrices/aomatrix.cc.o -MF CMakeFiles/votca_xtp.dir/aomatrices/aomatrix.cc.o.d -o CMakeFiles/votca_xtp.dir/aomatrices/aomatrix.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/aomatrices/aomatrix.cc +In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/ecpaobasis.h:24, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/aopotential.h:26, + from /build/reproducible-path/votca-2022.1/xtp/src/libxtp/aomatrices/aoecp.cc:21: +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 81 | loc_ = loc; + | ^~~ +In file included from /usr/include/hdf5/serial/H5Cpp.h:47, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:25: +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ +In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:31: +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 178 | attr = loc.createAttribute(name, *strType, dp); + | ^ +In file included from /usr/include/hdf5/serial/H5Cpp.h:34: +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 180 | attr = loc.openAttribute(name); + | ^ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 278 | parent = loc.createGroup(name); + | ^ +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 280 | parent = loc.openGroup(name); + | ^ +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 294 | parent = loc.createGroup(name); + | ^ +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 296 | parent = loc.openGroup(name); + | ^ +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2022.1/xtp/src/libxtp/aobasis.cc:23: @@ -4034,8 +4117,22 @@ /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -[ 32%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/aomatrices/aomatrix.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/aomatrices/aomatrix.cc.o -MF CMakeFiles/votca_xtp.dir/aomatrices/aomatrix.cc.o.d -o CMakeFiles/votca_xtp.dir/aomatrices/aomatrix.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/aomatrices/aomatrix.cc +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 162 | attr = loc.createAttribute(name, *dataType, dp); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 164 | attr = loc.openAttribute(name); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +[ 32%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/aomatrices/aomultipole.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/aomatrices/aomultipole.cc.o -MF CMakeFiles/votca_xtp.dir/aomatrices/aomultipole.cc.o.d -o CMakeFiles/votca_xtp.dir/aomatrices/aomultipole.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/aomatrices/aomultipole.cc /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' @@ -4055,11 +4152,21 @@ [ 32%] Linking CXX executable csg_property cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/csg_property.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/csg_property.dir/csg_property.cc.o -o csg_property -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools: ../libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 32%] Built target csg_property +make -f csg/src/tools/CMakeFiles/csg_density.dir/build.make csg/src/tools/CMakeFiles/csg_density.dir/depend +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/CMakeFiles/csg_density.dir/DependInfo.cmake --color= +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f csg/src/tools/CMakeFiles/csg_density.dir/build.make csg/src/tools/CMakeFiles/csg_density.dir/build +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 32%] Building CXX object csg/src/tools/CMakeFiles/csg_density.dir/csg_density.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT csg/src/tools/CMakeFiles/csg_density.dir/csg_density.cc.o -MF CMakeFiles/csg_density.dir/csg_density.cc.o.d -o CMakeFiles/csg_density.dir/csg_density.cc.o -c /build/reproducible-path/votca-2022.1/csg/src/tools/csg_density.cc [ 32%] Linking CXX executable csg_resample cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/csg_resample.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/csg_resample.dir/csg_resample.cc.o -o csg_resample -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools: ../libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 32%] Built target csg_property +[ 32%] Built target csg_resample make -f csg/src/tools/CMakeFiles/csg_imc_solve.dir/build.make csg/src/tools/CMakeFiles/csg_imc_solve.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/CMakeFiles/csg_imc_solve.dir/DependInfo.cmake --color= @@ -4068,8 +4175,11 @@ make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' [ 32%] Building CXX object csg/src/tools/CMakeFiles/csg_imc_solve.dir/csg_imc_solve.cc.o cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT csg/src/tools/CMakeFiles/csg_imc_solve.dir/csg_imc_solve.cc.o -MF CMakeFiles/csg_imc_solve.dir/csg_imc_solve.cc.o.d -o CMakeFiles/csg_imc_solve.dir/csg_imc_solve.cc.o -c /build/reproducible-path/votca-2022.1/csg/src/tools/csg_imc_solve.cc +[ 32%] Linking CXX executable csg_dump +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/csg_dump.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/csg_dump.dir/csg_dump.cc.o -o csg_dump -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools: ../libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 32%] Built target csg_resample +[ 32%] Built target csg_dump make -f csg/src/csg_boltzmann/CMakeFiles/votca_csg_boltzmann.dir/build.make csg/src/csg_boltzmann/CMakeFiles/votca_csg_boltzmann.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/csg_boltzmann /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csg_boltzmann /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csg_boltzmann/CMakeFiles/votca_csg_boltzmann.dir/DependInfo.cmake --color= @@ -4078,26 +4188,58 @@ make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' [ 32%] Building CXX object csg/src/csg_boltzmann/CMakeFiles/votca_csg_boltzmann.dir/bondedstatistics.cc.o cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csg_boltzmann && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT csg/src/csg_boltzmann/CMakeFiles/votca_csg_boltzmann.dir/bondedstatistics.cc.o -MF CMakeFiles/votca_csg_boltzmann.dir/bondedstatistics.cc.o.d -o CMakeFiles/votca_csg_boltzmann.dir/bondedstatistics.cc.o -c /build/reproducible-path/votca-2022.1/csg/src/csg_boltzmann/bondedstatistics.cc -[ 32%] Linking CXX executable csg_dump -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/csg_dump.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/csg_dump.dir/csg_dump.cc.o -o csg_dump -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools: ../libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a -[ 32%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/aomatrices/aomultipole.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/aomatrices/aomultipole.cc.o -MF CMakeFiles/votca_xtp.dir/aomatrices/aomultipole.cc.o.d -o CMakeFiles/votca_xtp.dir/aomatrices/aomultipole.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/aomatrices/aomultipole.cc +[ 32%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/aomatrices/aoplanewave.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/aomatrices/aoplanewave.cc.o -MF CMakeFiles/votca_xtp.dir/aomatrices/aoplanewave.cc.o.d -o CMakeFiles/votca_xtp.dir/aomatrices/aoplanewave.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/aomatrices/aoplanewave.cc +[ 32%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/aomatrices/aopotential.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/aomatrices/aopotential.cc.o -MF CMakeFiles/votca_xtp.dir/aomatrices/aopotential.cc.o.d -o CMakeFiles/votca_xtp.dir/aomatrices/aopotential.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/aomatrices/aopotential.cc +[ 32%] Building CXX object csg/src/tools/CMakeFiles/csg_stat.dir/csg_stat_imc.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT csg/src/tools/CMakeFiles/csg_stat.dir/csg_stat_imc.cc.o -MF CMakeFiles/csg_stat.dir/csg_stat_imc.cc.o.d -o CMakeFiles/csg_stat.dir/csg_stat_imc.cc.o -c /build/reproducible-path/votca-2022.1/csg/src/tools/csg_stat_imc.cc +[ 34%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/aomatrices/aotransform.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/aomatrices/aotransform.cc.o -MF CMakeFiles/votca_xtp.dir/aomatrices/aotransform.cc.o.d -o CMakeFiles/votca_xtp.dir/aomatrices/aotransform.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/aomatrices/aotransform.cc +[ 34%] Linking CXX executable csg_gmxtopol +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/csg_gmxtopol.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/csg_gmxtopol.dir/csg_gmxtopol.cc.o -o csg_gmxtopol -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools: ../libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 32%] Built target csg_dump +[ 34%] Built target csg_gmxtopol make -f csg/src/csgapps/CMakeFiles/fluctuations.dir/build.make csg/src/csgapps/CMakeFiles/fluctuations.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/csgapps /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps/CMakeFiles/fluctuations.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make -f csg/src/csgapps/CMakeFiles/fluctuations.dir/build.make csg/src/csgapps/CMakeFiles/fluctuations.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 32%] Building CXX object csg/src/csgapps/CMakeFiles/fluctuations.dir/fluctuations/fluctuations.cc.o +[ 34%] Building CXX object csg/src/csgapps/CMakeFiles/fluctuations.dir/fluctuations/fluctuations.cc.o cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT csg/src/csgapps/CMakeFiles/fluctuations.dir/fluctuations/fluctuations.cc.o -MF CMakeFiles/fluctuations.dir/fluctuations/fluctuations.cc.o.d -o CMakeFiles/fluctuations.dir/fluctuations/fluctuations.cc.o -c /build/reproducible-path/votca-2022.1/csg/src/csgapps/fluctuations/fluctuations.cc +[ 34%] Linking CXX executable csg_map +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/csg_map.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/csg_map.dir/csg_map.cc.o -o csg_map -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools: ../libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a +[ 34%] Linking CXX executable csg_dlptopol +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/csg_dlptopol.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/csg_dlptopol.dir/csg_dlptopol.cc.o -o csg_dlptopol -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools: ../libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 34%] Built target csg_map +make -f csg/src/csgapps/CMakeFiles/orientcorr.dir/build.make csg/src/csgapps/CMakeFiles/orientcorr.dir/depend +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/csgapps /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps/CMakeFiles/orientcorr.dir/DependInfo.cmake --color= +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f csg/src/csgapps/CMakeFiles/orientcorr.dir/build.make csg/src/csgapps/CMakeFiles/orientcorr.dir/build +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 34%] Building CXX object csg/src/csgapps/CMakeFiles/orientcorr.dir/orientcorr/orientcorr.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT csg/src/csgapps/CMakeFiles/orientcorr.dir/orientcorr/orientcorr.cc.o -MF CMakeFiles/orientcorr.dir/orientcorr/orientcorr.cc.o.d -o CMakeFiles/orientcorr.dir/orientcorr/orientcorr.cc.o -c /build/reproducible-path/votca-2022.1/csg/src/csgapps/orientcorr/orientcorr.cc +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 34%] Built target csg_dlptopol +make -f csg/src/csgapps/CMakeFiles/part_dist.dir/build.make csg/src/csgapps/CMakeFiles/part_dist.dir/depend +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/csgapps /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps/CMakeFiles/part_dist.dir/DependInfo.cmake --color= +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f csg/src/csgapps/CMakeFiles/part_dist.dir/build.make csg/src/csgapps/CMakeFiles/part_dist.dir/build +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 34%] Building CXX object csg/src/csgapps/CMakeFiles/part_dist.dir/part_dist/part_dist.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT csg/src/csgapps/CMakeFiles/part_dist.dir/part_dist/part_dist.cc.o -MF CMakeFiles/part_dist.dir/part_dist/part_dist.cc.o.d -o CMakeFiles/part_dist.dir/part_dist/part_dist.cc.o -c /build/reproducible-path/votca-2022.1/csg/src/csgapps/part_dist/part_dist.cc In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/ecpaobasis.h:24, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/aopotential.h:26, - from /build/reproducible-path/votca-2022.1/xtp/src/libxtp/aomatrices/aoecp.cc:21: + from /build/reproducible-path/votca-2022.1/xtp/src/libxtp/aomatrices/aomultipole.cc:21: /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; @@ -4148,14 +4290,6 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ -make -f csg/src/csgapps/CMakeFiles/orientcorr.dir/build.make csg/src/csgapps/CMakeFiles/orientcorr.dir/depend -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/csgapps /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps/CMakeFiles/orientcorr.dir/DependInfo.cmake --color= -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f csg/src/csgapps/CMakeFiles/orientcorr.dir/build.make csg/src/csgapps/CMakeFiles/orientcorr.dir/build -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 32%] Building CXX object csg/src/csgapps/CMakeFiles/orientcorr.dir/orientcorr/orientcorr.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT csg/src/csgapps/CMakeFiles/orientcorr.dir/orientcorr/orientcorr.cc.o -MF CMakeFiles/orientcorr.dir/orientcorr/orientcorr.cc.o.d -o CMakeFiles/orientcorr.dir/orientcorr/orientcorr.cc.o -c /build/reproducible-path/votca-2022.1/csg/src/csgapps/orientcorr/orientcorr.cc /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] @@ -4170,67 +4304,11 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ -[ 32%] Linking CXX executable csg_gmxtopol -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/csg_gmxtopol.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/csg_gmxtopol.dir/csg_gmxtopol.cc.o -o csg_gmxtopol -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools: ../libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a -[ 32%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/aomatrices/aoplanewave.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/aomatrices/aoplanewave.cc.o -MF CMakeFiles/votca_xtp.dir/aomatrices/aoplanewave.cc.o.d -o CMakeFiles/votca_xtp.dir/aomatrices/aoplanewave.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/aomatrices/aoplanewave.cc -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 32%] Built target csg_gmxtopol -make -f csg/src/csgapps/CMakeFiles/part_dist.dir/build.make csg/src/csgapps/CMakeFiles/part_dist.dir/depend -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/csgapps /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps/CMakeFiles/part_dist.dir/DependInfo.cmake --color= -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f csg/src/csgapps/CMakeFiles/part_dist.dir/build.make csg/src/csgapps/CMakeFiles/part_dist.dir/build -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 32%] Building CXX object csg/src/csgapps/CMakeFiles/part_dist.dir/part_dist/part_dist.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT csg/src/csgapps/CMakeFiles/part_dist.dir/part_dist/part_dist.cc.o -MF CMakeFiles/part_dist.dir/part_dist/part_dist.cc.o.d -o CMakeFiles/part_dist.dir/part_dist/part_dist.cc.o -c /build/reproducible-path/votca-2022.1/csg/src/csgapps/part_dist/part_dist.cc -[ 32%] Linking CXX executable csg_map -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/csg_map.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/csg_map.dir/csg_map.cc.o -o csg_map -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools: ../libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 32%] Built target csg_map -make -f csg/src/csgapps/CMakeFiles/partial_rdf.dir/build.make csg/src/csgapps/CMakeFiles/partial_rdf.dir/depend -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/csgapps /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps/CMakeFiles/partial_rdf.dir/DependInfo.cmake --color= -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f csg/src/csgapps/CMakeFiles/partial_rdf.dir/build.make csg/src/csgapps/CMakeFiles/partial_rdf.dir/build -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 32%] Building CXX object csg/src/csgapps/CMakeFiles/partial_rdf.dir/partial_rdf/partial_rdf.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT csg/src/csgapps/CMakeFiles/partial_rdf.dir/partial_rdf/partial_rdf.cc.o -MF CMakeFiles/partial_rdf.dir/partial_rdf/partial_rdf.cc.o.d -o CMakeFiles/partial_rdf.dir/partial_rdf/partial_rdf.cc.o -c /build/reproducible-path/votca-2022.1/csg/src/csgapps/partial_rdf/partial_rdf.cc -[ 32%] Linking CXX executable csg_density -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/csg_density.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/csg_density.dir/csg_density.cc.o -o csg_density -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools: ../libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 32%] Built target csg_density -make -f csg/src/csgapps/CMakeFiles/radii.dir/build.make csg/src/csgapps/CMakeFiles/radii.dir/depend -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/csgapps /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps/CMakeFiles/radii.dir/DependInfo.cmake --color= -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f csg/src/csgapps/CMakeFiles/radii.dir/build.make csg/src/csgapps/CMakeFiles/radii.dir/build -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 34%] Building CXX object csg/src/csgapps/CMakeFiles/radii.dir/radii/radii.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT csg/src/csgapps/CMakeFiles/radii.dir/radii/radii.cc.o -MF CMakeFiles/radii.dir/radii/radii.cc.o.d -o CMakeFiles/radii.dir/radii/radii.cc.o -c /build/reproducible-path/votca-2022.1/csg/src/csgapps/radii/radii.cc -[ 34%] Linking CXX executable csg_dlptopol -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/csg_dlptopol.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/csg_dlptopol.dir/csg_dlptopol.cc.o -o csg_dlptopol -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools: ../libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 34%] Built target csg_dlptopol -make -f csg/src/csgapps/CMakeFiles/sphericalorder.dir/build.make csg/src/csgapps/CMakeFiles/sphericalorder.dir/depend -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/csgapps /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps/CMakeFiles/sphericalorder.dir/DependInfo.cmake --color= -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f csg/src/csgapps/CMakeFiles/sphericalorder.dir/build.make csg/src/csgapps/CMakeFiles/sphericalorder.dir/build -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 34%] Building CXX object csg/src/csgapps/CMakeFiles/sphericalorder.dir/sphericalorder/sphericalorder.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT csg/src/csgapps/CMakeFiles/sphericalorder.dir/sphericalorder/sphericalorder.cc.o -MF CMakeFiles/sphericalorder.dir/sphericalorder/sphericalorder.cc.o.d -o CMakeFiles/sphericalorder.dir/sphericalorder/sphericalorder.cc.o -c /build/reproducible-path/votca-2022.1/csg/src/csgapps/sphericalorder/sphericalorder.cc -[ 34%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/aomatrices/aopotential.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/aomatrices/aopotential.cc.o -MF CMakeFiles/votca_xtp.dir/aomatrices/aopotential.cc.o.d -o CMakeFiles/votca_xtp.dir/aomatrices/aopotential.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/aomatrices/aopotential.cc In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/ecpaobasis.h:24, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/aopotential.h:26, - from /build/reproducible-path/votca-2022.1/xtp/src/libxtp/aomatrices/aomultipole.cc:21: + from /build/reproducible-path/votca-2022.1/xtp/src/libxtp/aomatrices/aopotential.cc:21: /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; @@ -4281,33 +4359,12 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 162 | attr = loc.createAttribute(name, *dataType, dp); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 164 | attr = loc.openAttribute(name); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -[ 35%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/aomatrices/aotransform.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/aomatrices/aotransform.cc.o -MF CMakeFiles/votca_xtp.dir/aomatrices/aotransform.cc.o.d -o CMakeFiles/votca_xtp.dir/aomatrices/aotransform.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/aomatrices/aotransform.cc -[ 35%] Building CXX object csg/src/csg_boltzmann/CMakeFiles/votca_csg_boltzmann.dir/stdanalysis.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csg_boltzmann && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT csg/src/csg_boltzmann/CMakeFiles/votca_csg_boltzmann.dir/stdanalysis.cc.o -MF CMakeFiles/votca_csg_boltzmann.dir/stdanalysis.cc.o.d -o CMakeFiles/votca_csg_boltzmann.dir/stdanalysis.cc.o -c /build/reproducible-path/votca-2022.1/csg/src/csg_boltzmann/stdanalysis.cc -[ 36%] Linking CXX executable csg_stat -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/csg_stat.dir/link.txt --verbose=1 /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/csg_stat.dir/csg_stat.cc.o CMakeFiles/csg_stat.dir/csg_stat_imc.cc.o -o csg_stat -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools: ../libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ @@ -4354,71 +4411,6 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ -In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/ecpaobasis.h:24, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/aopotential.h:26, - from /build/reproducible-path/votca-2022.1/xtp/src/libxtp/aomatrices/aoplanewave.cc:21: -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 81 | loc_ = loc; - | ^~~ -In file included from /usr/include/hdf5/serial/H5Cpp.h:47, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:25: -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 36%] Built target csg_stat -make -f csg/src/csgapps/CMakeFiles/traj_force.dir/build.make csg/src/csgapps/CMakeFiles/traj_force.dir/depend -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/csgapps /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps/CMakeFiles/traj_force.dir/DependInfo.cmake --color= -In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:31: -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 178 | attr = loc.createAttribute(name, *strType, dp); - | ^ -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f csg/src/csgapps/CMakeFiles/traj_force.dir/build.make csg/src/csgapps/CMakeFiles/traj_force.dir/build -In file included from /usr/include/hdf5/serial/H5Cpp.h:34: -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 180 | attr = loc.openAttribute(name); - | ^ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 278 | parent = loc.createGroup(name); - | ^ -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 280 | parent = loc.openGroup(name); - | ^ -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 294 | parent = loc.createGroup(name); - | ^ -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 296 | parent = loc.openGroup(name); - | ^ -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ -[ 36%] Building CXX object csg/src/csgapps/CMakeFiles/traj_force.dir/traj_force/traj_force.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT csg/src/csgapps/CMakeFiles/traj_force.dir/traj_force/traj_force.cc.o -MF CMakeFiles/traj_force.dir/traj_force/traj_force.cc.o.d -o CMakeFiles/traj_force.dir/traj_force/traj_force.cc.o -c /build/reproducible-path/votca-2022.1/csg/src/csgapps/traj_force/traj_force.cc /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] @@ -4433,11 +4425,15 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ +[ 34%] Building CXX object csg/src/csg_boltzmann/CMakeFiles/votca_csg_boltzmann.dir/stdanalysis.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csg_boltzmann && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT csg/src/csg_boltzmann/CMakeFiles/votca_csg_boltzmann.dir/stdanalysis.cc.o -MF CMakeFiles/votca_csg_boltzmann.dir/stdanalysis.cc.o.d -o CMakeFiles/votca_csg_boltzmann.dir/stdanalysis.cc.o -c /build/reproducible-path/votca-2022.1/csg/src/csg_boltzmann/stdanalysis.cc +[ 34%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/aoshell.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/aoshell.cc.o -MF CMakeFiles/votca_xtp.dir/aoshell.cc.o.d -o CMakeFiles/votca_xtp.dir/aoshell.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/aoshell.cc In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/ecpaobasis.h:24, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/aopotential.h:26, - from /build/reproducible-path/votca-2022.1/xtp/src/libxtp/aomatrices/aopotential.cc:21: + from /build/reproducible-path/votca-2022.1/xtp/src/libxtp/aomatrices/aoplanewave.cc:21: /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; @@ -4488,6 +4484,8 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ +[ 34%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/atom.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/atom.cc.o -MF CMakeFiles/votca_xtp.dir/atom.cc.o.d -o CMakeFiles/votca_xtp.dir/atom.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/atom.cc /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] @@ -4502,92 +4500,8 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ -[ 36%] Linking CXX executable fluctuations/csg_fluctuations -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps && /usr/bin/cmake -E cmake_link_script CMakeFiles/fluctuations.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/fluctuations.dir/fluctuations/fluctuations.cc.o -o fluctuations/csg_fluctuations -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools: ../libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a -[ 36%] Linking CXX executable csg_reupdate -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/csg_reupdate.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/csg_reupdate.dir/csg_reupdate.cc.o -o csg_reupdate -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools: ../libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 36%] Built target fluctuations -make -f csg/src/tests/CMakeFiles/unit_test_bead.dir/build.make csg/src/tests/CMakeFiles/unit_test_bead.dir/depend -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests/CMakeFiles/unit_test_bead.dir/DependInfo.cmake --color= -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f csg/src/tests/CMakeFiles/unit_test_bead.dir/build.make csg/src/tests/CMakeFiles/unit_test_bead.dir/build -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 38%] Building CXX object csg/src/tests/CMakeFiles/unit_test_bead.dir/test_bead.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DCSG_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/csg/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT csg/src/tests/CMakeFiles/unit_test_bead.dir/test_bead.cc.o -MF CMakeFiles/unit_test_bead.dir/test_bead.cc.o.d -o CMakeFiles/unit_test_bead.dir/test_bead.cc.o -c /build/reproducible-path/votca-2022.1/csg/src/tests/test_bead.cc -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 38%] Built target csg_reupdate -make -f csg/src/tests/CMakeFiles/unit_test_beadtriple.dir/build.make csg/src/tests/CMakeFiles/unit_test_beadtriple.dir/depend -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests/CMakeFiles/unit_test_beadtriple.dir/DependInfo.cmake --color= -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f csg/src/tests/CMakeFiles/unit_test_beadtriple.dir/build.make csg/src/tests/CMakeFiles/unit_test_beadtriple.dir/build -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 38%] Building CXX object csg/src/tests/CMakeFiles/unit_test_beadtriple.dir/test_beadtriple.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DCSG_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/csg/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT csg/src/tests/CMakeFiles/unit_test_beadtriple.dir/test_beadtriple.cc.o -MF CMakeFiles/unit_test_beadtriple.dir/test_beadtriple.cc.o.d -o CMakeFiles/unit_test_beadtriple.dir/test_beadtriple.cc.o -c /build/reproducible-path/votca-2022.1/csg/src/tests/test_beadtriple.cc -[ 38%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/aoshell.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/aoshell.cc.o -MF CMakeFiles/votca_xtp.dir/aoshell.cc.o.d -o CMakeFiles/votca_xtp.dir/aoshell.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/aoshell.cc -[ 38%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/atom.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/atom.cc.o -MF CMakeFiles/votca_xtp.dir/atom.cc.o.d -o CMakeFiles/votca_xtp.dir/atom.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/atom.cc -[ 39%] Linking CXX executable orientcorr/csg_orientcorr -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps && /usr/bin/cmake -E cmake_link_script CMakeFiles/orientcorr.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/orientcorr.dir/orientcorr/orientcorr.cc.o -o orientcorr/csg_orientcorr -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools: ../libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a -[ 39%] Linking CXX executable radii/csg_radii -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps && /usr/bin/cmake -E cmake_link_script CMakeFiles/radii.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/radii.dir/radii/radii.cc.o -o radii/csg_radii -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools: ../libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 39%] Built target orientcorr -make -f csg/src/tests/CMakeFiles/unit_test_basebead.dir/build.make csg/src/tests/CMakeFiles/unit_test_basebead.dir/depend -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests/CMakeFiles/unit_test_basebead.dir/DependInfo.cmake --color= -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f csg/src/tests/CMakeFiles/unit_test_basebead.dir/build.make csg/src/tests/CMakeFiles/unit_test_basebead.dir/build -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 39%] Building CXX object csg/src/tests/CMakeFiles/unit_test_basebead.dir/test_basebead.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DCSG_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/csg/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT csg/src/tests/CMakeFiles/unit_test_basebead.dir/test_basebead.cc.o -MF CMakeFiles/unit_test_basebead.dir/test_basebead.cc.o.d -o CMakeFiles/unit_test_basebead.dir/test_basebead.cc.o -c /build/reproducible-path/votca-2022.1/csg/src/tests/test_basebead.cc -[ 39%] Built target radii -make -f csg/src/tests/CMakeFiles/unit_test_beadmotif_algorithms.dir/build.make csg/src/tests/CMakeFiles/unit_test_beadmotif_algorithms.dir/depend -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests/CMakeFiles/unit_test_beadmotif_algorithms.dir/DependInfo.cmake --color= -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f csg/src/tests/CMakeFiles/unit_test_beadmotif_algorithms.dir/build.make csg/src/tests/CMakeFiles/unit_test_beadmotif_algorithms.dir/build -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 39%] Building CXX object csg/src/tests/CMakeFiles/unit_test_beadmotif_algorithms.dir/test_beadmotif_algorithms.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DCSG_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/csg/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT csg/src/tests/CMakeFiles/unit_test_beadmotif_algorithms.dir/test_beadmotif_algorithms.cc.o -MF CMakeFiles/unit_test_beadmotif_algorithms.dir/test_beadmotif_algorithms.cc.o.d -o CMakeFiles/unit_test_beadmotif_algorithms.dir/test_beadmotif_algorithms.cc.o -c /build/reproducible-path/votca-2022.1/csg/src/tests/test_beadmotif_algorithms.cc -[ 39%] Linking CXX executable part_dist/csg_part_dist -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps && /usr/bin/cmake -E cmake_link_script CMakeFiles/part_dist.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/part_dist.dir/part_dist/part_dist.cc.o -o part_dist/csg_part_dist -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools: ../libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 39%] Built target part_dist -make -f csg/src/tests/CMakeFiles/unit_test_beadmotif_base.dir/build.make csg/src/tests/CMakeFiles/unit_test_beadmotif_base.dir/depend -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests/CMakeFiles/unit_test_beadmotif_base.dir/DependInfo.cmake --color= -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f csg/src/tests/CMakeFiles/unit_test_beadmotif_base.dir/build.make csg/src/tests/CMakeFiles/unit_test_beadmotif_base.dir/build -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 39%] Building CXX object csg/src/tests/CMakeFiles/unit_test_beadmotif_base.dir/test_beadmotif_base.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DCSG_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/csg/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT csg/src/tests/CMakeFiles/unit_test_beadmotif_base.dir/test_beadmotif_base.cc.o -MF CMakeFiles/unit_test_beadmotif_base.dir/test_beadmotif_base.cc.o.d -o CMakeFiles/unit_test_beadmotif_base.dir/test_beadmotif_base.cc.o -c /build/reproducible-path/votca-2022.1/csg/src/tests/test_beadmotif_base.cc -[ 39%] Building CXX object csg/src/csg_boltzmann/CMakeFiles/votca_csg_boltzmann.dir/tabulatedpotential.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csg_boltzmann && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT csg/src/csg_boltzmann/CMakeFiles/votca_csg_boltzmann.dir/tabulatedpotential.cc.o -MF CMakeFiles/votca_csg_boltzmann.dir/tabulatedpotential.cc.o.d -o CMakeFiles/votca_csg_boltzmann.dir/tabulatedpotential.cc.o -c /build/reproducible-path/votca-2022.1/csg/src/csg_boltzmann/tabulatedpotential.cc -[ 39%] Linking CXX executable sphericalorder/csg_sphericalorder -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps && /usr/bin/cmake -E cmake_link_script CMakeFiles/sphericalorder.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/sphericalorder.dir/sphericalorder/sphericalorder.cc.o -o sphericalorder/csg_sphericalorder -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools: ../libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 39%] Built target sphericalorder -make -f csg/src/tests/CMakeFiles/unit_test_beadmotif_connector.dir/build.make csg/src/tests/CMakeFiles/unit_test_beadmotif_connector.dir/depend -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests/CMakeFiles/unit_test_beadmotif_connector.dir/DependInfo.cmake --color= -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f csg/src/tests/CMakeFiles/unit_test_beadmotif_connector.dir/build.make csg/src/tests/CMakeFiles/unit_test_beadmotif_connector.dir/build -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 39%] Building CXX object csg/src/tests/CMakeFiles/unit_test_beadmotif_connector.dir/test_beadmotif_connector.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DCSG_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/csg/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT csg/src/tests/CMakeFiles/unit_test_beadmotif_connector.dir/test_beadmotif_connector.cc.o -MF CMakeFiles/unit_test_beadmotif_connector.dir/test_beadmotif_connector.cc.o.d -o CMakeFiles/unit_test_beadmotif_connector.dir/test_beadmotif_connector.cc.o -c /build/reproducible-path/votca-2022.1/csg/src/tests/test_beadmotif_connector.cc -[ 39%] Building CXX object csg/src/csgapps/CMakeFiles/partial_rdf.dir/partial_rdf/rdf_calculator.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT csg/src/csgapps/CMakeFiles/partial_rdf.dir/partial_rdf/rdf_calculator.cc.o -MF CMakeFiles/partial_rdf.dir/partial_rdf/rdf_calculator.cc.o.d -o CMakeFiles/partial_rdf.dir/partial_rdf/rdf_calculator.cc.o -c /build/reproducible-path/votca-2022.1/csg/src/csgapps/partial_rdf/rdf_calculator.cc +[ 34%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/basisset.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/basisset.cc.o -MF CMakeFiles/votca_xtp.dir/basisset.cc.o.d -o CMakeFiles/votca_xtp.dir/basisset.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/basisset.cc In file included from /build/reproducible-path/votca-2022.1/xtp/src/libxtp/atom.cc:25: /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] @@ -4598,6 +4512,34 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ +[ 34%] Linking CXX executable csg_reupdate +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/csg_reupdate.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/csg_reupdate.dir/csg_reupdate.cc.o -o csg_reupdate -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools: ../libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a +[ 34%] Linking CXX executable csg_density +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/csg_density.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/csg_density.dir/csg_density.cc.o -o csg_density -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools: ../libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 34%] Built target csg_reupdate +make -f csg/src/csgapps/CMakeFiles/partial_rdf.dir/build.make csg/src/csgapps/CMakeFiles/partial_rdf.dir/depend +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/csgapps /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps/CMakeFiles/partial_rdf.dir/DependInfo.cmake --color= +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f csg/src/csgapps/CMakeFiles/partial_rdf.dir/build.make csg/src/csgapps/CMakeFiles/partial_rdf.dir/build +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 34%] Building CXX object csg/src/csgapps/CMakeFiles/partial_rdf.dir/partial_rdf/partial_rdf.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT csg/src/csgapps/CMakeFiles/partial_rdf.dir/partial_rdf/partial_rdf.cc.o -MF CMakeFiles/partial_rdf.dir/partial_rdf/partial_rdf.cc.o.d -o CMakeFiles/partial_rdf.dir/partial_rdf/partial_rdf.cc.o -c /build/reproducible-path/votca-2022.1/csg/src/csgapps/partial_rdf/partial_rdf.cc +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 34%] Built target csg_density +make -f csg/src/csgapps/CMakeFiles/radii.dir/build.make csg/src/csgapps/CMakeFiles/radii.dir/depend +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/csgapps /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps/CMakeFiles/radii.dir/DependInfo.cmake --color= +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f csg/src/csgapps/CMakeFiles/radii.dir/build.make csg/src/csgapps/CMakeFiles/radii.dir/build +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 35%] Building CXX object csg/src/csgapps/CMakeFiles/radii.dir/radii/radii.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT csg/src/csgapps/CMakeFiles/radii.dir/radii/radii.cc.o -MF CMakeFiles/radii.dir/radii/radii.cc.o.d -o CMakeFiles/radii.dir/radii/radii.cc.o -c /build/reproducible-path/votca-2022.1/csg/src/csgapps/radii/radii.cc +[ 35%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/bfgs_trm.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/bfgs_trm.cc.o -MF CMakeFiles/votca_xtp.dir/bfgs_trm.cc.o.d -o CMakeFiles/votca_xtp.dir/bfgs_trm.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/bfgs_trm.cc In file included from /build/reproducible-path/votca-2022.1/xtp/src/libxtp/aoshell.cc:24: /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] @@ -4608,150 +4550,81 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ -[ 39%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/basisset.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/basisset.cc.o -MF CMakeFiles/votca_xtp.dir/basisset.cc.o.d -o CMakeFiles/votca_xtp.dir/basisset.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/basisset.cc -[ 39%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/bfgs_trm.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/bfgs_trm.cc.o -MF CMakeFiles/votca_xtp.dir/bfgs_trm.cc.o.d -o CMakeFiles/votca_xtp.dir/bfgs_trm.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/bfgs_trm.cc -[ 39%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/bsecoupling.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/bsecoupling.cc.o -MF CMakeFiles/votca_xtp.dir/bsecoupling.cc.o.d -o CMakeFiles/votca_xtp.dir/bsecoupling.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/bsecoupling.cc -[ 39%] Linking CXX executable traj_force/csg_traj_force -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps && /usr/bin/cmake -E cmake_link_script CMakeFiles/traj_force.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/traj_force.dir/traj_force/traj_force.cc.o -o traj_force/csg_traj_force -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools: ../libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a +[ 35%] Linking CXX executable fluctuations/csg_fluctuations +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps && /usr/bin/cmake -E cmake_link_script CMakeFiles/fluctuations.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/fluctuations.dir/fluctuations/fluctuations.cc.o -o fluctuations/csg_fluctuations -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools: ../libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 39%] Built target traj_force -make -f csg/src/tests/CMakeFiles/unit_test_beadstructure_base.dir/build.make csg/src/tests/CMakeFiles/unit_test_beadstructure_base.dir/depend +[ 35%] Built target fluctuations +make -f csg/src/csgapps/CMakeFiles/sphericalorder.dir/build.make csg/src/csgapps/CMakeFiles/sphericalorder.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests/CMakeFiles/unit_test_beadstructure_base.dir/DependInfo.cmake --color= +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/csgapps /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps/CMakeFiles/sphericalorder.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f csg/src/tests/CMakeFiles/unit_test_beadstructure_base.dir/build.make csg/src/tests/CMakeFiles/unit_test_beadstructure_base.dir/build +make -f csg/src/csgapps/CMakeFiles/sphericalorder.dir/build.make csg/src/csgapps/CMakeFiles/sphericalorder.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 39%] Building CXX object csg/src/tests/CMakeFiles/unit_test_beadstructure_base.dir/test_beadstructure_base.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DCSG_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/csg/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT csg/src/tests/CMakeFiles/unit_test_beadstructure_base.dir/test_beadstructure_base.cc.o -MF CMakeFiles/unit_test_beadstructure_base.dir/test_beadstructure_base.cc.o.d -o CMakeFiles/unit_test_beadstructure_base.dir/test_beadstructure_base.cc.o -c /build/reproducible-path/votca-2022.1/csg/src/tests/test_beadstructure_base.cc -[ 41%] Linking CXX executable csg_fmatch -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/csg_fmatch.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/csg_fmatch.dir/csg_fmatch.cc.o -o csg_fmatch -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools: ../libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a +[ 35%] Building CXX object csg/src/csgapps/CMakeFiles/sphericalorder.dir/sphericalorder/sphericalorder.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT csg/src/csgapps/CMakeFiles/sphericalorder.dir/sphericalorder/sphericalorder.cc.o -MF CMakeFiles/sphericalorder.dir/sphericalorder/sphericalorder.cc.o.d -o CMakeFiles/sphericalorder.dir/sphericalorder/sphericalorder.cc.o -c /build/reproducible-path/votca-2022.1/csg/src/csgapps/sphericalorder/sphericalorder.cc +[ 35%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/bsecoupling.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/bsecoupling.cc.o -MF CMakeFiles/votca_xtp.dir/bsecoupling.cc.o.d -o CMakeFiles/votca_xtp.dir/bsecoupling.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/bsecoupling.cc +[ 35%] Linking CXX executable part_dist/csg_part_dist +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps && /usr/bin/cmake -E cmake_link_script CMakeFiles/part_dist.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/part_dist.dir/part_dist/part_dist.cc.o -o part_dist/csg_part_dist -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools: ../libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 41%] Built target csg_fmatch -make -f csg/src/tests/CMakeFiles/unit_test_beadstructure_algorithms.dir/build.make csg/src/tests/CMakeFiles/unit_test_beadstructure_algorithms.dir/depend +[ 35%] Built target part_dist +make -f csg/src/csgapps/CMakeFiles/traj_force.dir/build.make csg/src/csgapps/CMakeFiles/traj_force.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests/CMakeFiles/unit_test_beadstructure_algorithms.dir/DependInfo.cmake --color= +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/csgapps /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps/CMakeFiles/traj_force.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f csg/src/tests/CMakeFiles/unit_test_beadstructure_algorithms.dir/build.make csg/src/tests/CMakeFiles/unit_test_beadstructure_algorithms.dir/build +make -f csg/src/csgapps/CMakeFiles/traj_force.dir/build.make csg/src/csgapps/CMakeFiles/traj_force.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 42%] Building CXX object csg/src/tests/CMakeFiles/unit_test_beadstructure_algorithms.dir/test_beadstructure_algorithms.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DCSG_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/csg/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT csg/src/tests/CMakeFiles/unit_test_beadstructure_algorithms.dir/test_beadstructure_algorithms.cc.o -MF CMakeFiles/unit_test_beadstructure_algorithms.dir/test_beadstructure_algorithms.cc.o.d -o CMakeFiles/unit_test_beadstructure_algorithms.dir/test_beadstructure_algorithms.cc.o -c /build/reproducible-path/votca-2022.1/csg/src/tests/test_beadstructure_algorithms.cc -[ 42%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/calculators/eanalyze.cc.o +[ 35%] Building CXX object csg/src/csgapps/CMakeFiles/traj_force.dir/traj_force/traj_force.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT csg/src/csgapps/CMakeFiles/traj_force.dir/traj_force/traj_force.cc.o -MF CMakeFiles/traj_force.dir/traj_force/traj_force.cc.o.d -o CMakeFiles/traj_force.dir/traj_force/traj_force.cc.o -c /build/reproducible-path/votca-2022.1/csg/src/csgapps/traj_force/traj_force.cc +[ 35%] Building CXX object csg/src/csg_boltzmann/CMakeFiles/votca_csg_boltzmann.dir/tabulatedpotential.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csg_boltzmann && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT csg/src/csg_boltzmann/CMakeFiles/votca_csg_boltzmann.dir/tabulatedpotential.cc.o -MF CMakeFiles/votca_csg_boltzmann.dir/tabulatedpotential.cc.o.d -o CMakeFiles/votca_csg_boltzmann.dir/tabulatedpotential.cc.o -c /build/reproducible-path/votca-2022.1/csg/src/csg_boltzmann/tabulatedpotential.cc +[ 35%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/calculators/eanalyze.cc.o cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/calculators/eanalyze.cc.o -MF CMakeFiles/votca_xtp.dir/calculators/eanalyze.cc.o.d -o CMakeFiles/votca_xtp.dir/calculators/eanalyze.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/calculators/eanalyze.cc -[ 42%] Linking CXX executable unit_test_beadtriple -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_beadtriple.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_beadtriple.dir/test_beadtriple.cc.o -o unit_test_beadtriple -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools ../libcsg/libvotca_csg.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a +[ 36%] Linking CXX executable orientcorr/csg_orientcorr +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps && /usr/bin/cmake -E cmake_link_script CMakeFiles/orientcorr.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/orientcorr.dir/orientcorr/orientcorr.cc.o -o orientcorr/csg_orientcorr -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools: ../libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a +[ 38%] Linking CXX executable csg_stat +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/csg_stat.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/csg_stat.dir/csg_stat.cc.o CMakeFiles/csg_stat.dir/csg_stat_imc.cc.o -o csg_stat -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools: ../libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 42%] Built target unit_test_beadtriple -make -f csg/src/tests/CMakeFiles/unit_test_csg_topology.dir/build.make csg/src/tests/CMakeFiles/unit_test_csg_topology.dir/depend +[ 38%] Built target orientcorr +make -f csg/src/tests/CMakeFiles/unit_test_bead.dir/build.make csg/src/tests/CMakeFiles/unit_test_bead.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests/CMakeFiles/unit_test_csg_topology.dir/DependInfo.cmake --color= +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests/CMakeFiles/unit_test_bead.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f csg/src/tests/CMakeFiles/unit_test_csg_topology.dir/build.make csg/src/tests/CMakeFiles/unit_test_csg_topology.dir/build +make -f csg/src/tests/CMakeFiles/unit_test_bead.dir/build.make csg/src/tests/CMakeFiles/unit_test_bead.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 42%] Building CXX object csg/src/tests/CMakeFiles/unit_test_csg_topology.dir/test_csg_topology.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DCSG_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/csg/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT csg/src/tests/CMakeFiles/unit_test_csg_topology.dir/test_csg_topology.cc.o -MF CMakeFiles/unit_test_csg_topology.dir/test_csg_topology.cc.o.d -o CMakeFiles/unit_test_csg_topology.dir/test_csg_topology.cc.o -c /build/reproducible-path/votca-2022.1/csg/src/tests/test_csg_topology.cc -[ 42%] Linking CXX executable unit_test_beadmotif_base -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_beadmotif_base.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_beadmotif_base.dir/test_beadmotif_base.cc.o -o unit_test_beadmotif_base -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools ../libcsg/libvotca_csg.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a +[ 39%] Building CXX object csg/src/tests/CMakeFiles/unit_test_bead.dir/test_bead.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DCSG_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/csg/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT csg/src/tests/CMakeFiles/unit_test_bead.dir/test_bead.cc.o -MF CMakeFiles/unit_test_bead.dir/test_bead.cc.o.d -o CMakeFiles/unit_test_bead.dir/test_bead.cc.o -c /build/reproducible-path/votca-2022.1/csg/src/tests/test_bead.cc make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 42%] Built target unit_test_beadmotif_base -make -f csg/src/tests/CMakeFiles/unit_test_interaction.dir/build.make csg/src/tests/CMakeFiles/unit_test_interaction.dir/depend +[ 39%] Built target csg_stat +make -f csg/src/tests/CMakeFiles/unit_test_beadtriple.dir/build.make csg/src/tests/CMakeFiles/unit_test_beadtriple.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests/CMakeFiles/unit_test_interaction.dir/DependInfo.cmake --color= +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests/CMakeFiles/unit_test_beadtriple.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f csg/src/tests/CMakeFiles/unit_test_interaction.dir/build.make csg/src/tests/CMakeFiles/unit_test_interaction.dir/build +make -f csg/src/tests/CMakeFiles/unit_test_beadtriple.dir/build.make csg/src/tests/CMakeFiles/unit_test_beadtriple.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 42%] Building CXX object csg/src/tests/CMakeFiles/unit_test_interaction.dir/test_interaction.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DCSG_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/csg/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT csg/src/tests/CMakeFiles/unit_test_interaction.dir/test_interaction.cc.o -MF CMakeFiles/unit_test_interaction.dir/test_interaction.cc.o.d -o CMakeFiles/unit_test_interaction.dir/test_interaction.cc.o -c /build/reproducible-path/votca-2022.1/csg/src/tests/test_interaction.cc -[ 42%] Linking CXX executable csg_imc_solve -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/csg_imc_solve.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/csg_imc_solve.dir/csg_imc_solve.cc.o -o csg_imc_solve -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools: ../libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a -[ 42%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/calculators/einternal.cc.o +[ 39%] Building CXX object csg/src/tests/CMakeFiles/unit_test_beadtriple.dir/test_beadtriple.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DCSG_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/csg/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT csg/src/tests/CMakeFiles/unit_test_beadtriple.dir/test_beadtriple.cc.o -MF CMakeFiles/unit_test_beadtriple.dir/test_beadtriple.cc.o.d -o CMakeFiles/unit_test_beadtriple.dir/test_beadtriple.cc.o -c /build/reproducible-path/votca-2022.1/csg/src/tests/test_beadtriple.cc +[ 41%] Linking CXX executable csg_fmatch +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/csg_fmatch.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/csg_fmatch.dir/csg_fmatch.cc.o -o csg_fmatch -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools: ../libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a +[ 41%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/calculators/einternal.cc.o cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/calculators/einternal.cc.o -MF CMakeFiles/votca_xtp.dir/calculators/einternal.cc.o.d -o CMakeFiles/votca_xtp.dir/calculators/einternal.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/calculators/einternal.cc -[ 42%] Linking CXX executable unit_test_bead -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_bead.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_bead.dir/test_bead.cc.o -o unit_test_bead -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools ../libcsg/libvotca_csg.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 42%] Built target csg_imc_solve -make -f csg/src/tests/CMakeFiles/unit_test_lammpsdatareader.dir/build.make csg/src/tests/CMakeFiles/unit_test_lammpsdatareader.dir/depend -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests/CMakeFiles/unit_test_lammpsdatareader.dir/DependInfo.cmake --color= -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f csg/src/tests/CMakeFiles/unit_test_lammpsdatareader.dir/build.make csg/src/tests/CMakeFiles/unit_test_lammpsdatareader.dir/build -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 42%] Building CXX object csg/src/tests/CMakeFiles/unit_test_lammpsdatareader.dir/test_lammpsdatareader.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DCSG_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/csg/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT csg/src/tests/CMakeFiles/unit_test_lammpsdatareader.dir/test_lammpsdatareader.cc.o -MF CMakeFiles/unit_test_lammpsdatareader.dir/test_lammpsdatareader.cc.o.d -o CMakeFiles/unit_test_lammpsdatareader.dir/test_lammpsdatareader.cc.o -c /build/reproducible-path/votca-2022.1/csg/src/tests/test_lammpsdatareader.cc -[ 42%] Linking CXX executable unit_test_beadmotif_connector -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_beadmotif_connector.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_beadmotif_connector.dir/test_beadmotif_connector.cc.o -o unit_test_beadmotif_connector -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools ../libcsg/libvotca_csg.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 42%] Built target unit_test_bead -make -f csg/src/tests/CMakeFiles/unit_test_lammpsdumpreaderwriter.dir/build.make csg/src/tests/CMakeFiles/unit_test_lammpsdumpreaderwriter.dir/depend -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests/CMakeFiles/unit_test_lammpsdumpreaderwriter.dir/DependInfo.cmake --color= -[ 42%] Linking CXX executable unit_test_basebead -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_basebead.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_basebead.dir/test_basebead.cc.o -o unit_test_basebead -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools ../libcsg/libvotca_csg.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f csg/src/tests/CMakeFiles/unit_test_lammpsdumpreaderwriter.dir/build.make csg/src/tests/CMakeFiles/unit_test_lammpsdumpreaderwriter.dir/build -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 42%] Building CXX object csg/src/tests/CMakeFiles/unit_test_lammpsdumpreaderwriter.dir/test_lammpsdumpreaderwriter.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DCSG_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/csg/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT csg/src/tests/CMakeFiles/unit_test_lammpsdumpreaderwriter.dir/test_lammpsdumpreaderwriter.cc.o -MF CMakeFiles/unit_test_lammpsdumpreaderwriter.dir/test_lammpsdumpreaderwriter.cc.o.d -o CMakeFiles/unit_test_lammpsdumpreaderwriter.dir/test_lammpsdumpreaderwriter.cc.o -c /build/reproducible-path/votca-2022.1/csg/src/tests/test_lammpsdumpreaderwriter.cc -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 42%] Built target unit_test_beadmotif_connector -make -f csg/src/tests/CMakeFiles/unit_test_nblist_3body.dir/build.make csg/src/tests/CMakeFiles/unit_test_nblist_3body.dir/depend -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests/CMakeFiles/unit_test_nblist_3body.dir/DependInfo.cmake --color= -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f csg/src/tests/CMakeFiles/unit_test_nblist_3body.dir/build.make csg/src/tests/CMakeFiles/unit_test_nblist_3body.dir/build -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 42%] Building CXX object csg/src/tests/CMakeFiles/unit_test_nblist_3body.dir/test_nblist_3body.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DCSG_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/csg/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT csg/src/tests/CMakeFiles/unit_test_nblist_3body.dir/test_nblist_3body.cc.o -MF CMakeFiles/unit_test_nblist_3body.dir/test_nblist_3body.cc.o.d -o CMakeFiles/unit_test_nblist_3body.dir/test_nblist_3body.cc.o -c /build/reproducible-path/votca-2022.1/csg/src/tests/test_nblist_3body.cc make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 42%] Built target unit_test_basebead -make -f csg/src/tests/CMakeFiles/unit_test_nblistgrid_3body.dir/build.make csg/src/tests/CMakeFiles/unit_test_nblistgrid_3body.dir/depend +[ 41%] Built target csg_fmatch +make -f csg/src/tests/CMakeFiles/unit_test_basebead.dir/build.make csg/src/tests/CMakeFiles/unit_test_basebead.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests/CMakeFiles/unit_test_nblistgrid_3body.dir/DependInfo.cmake --color= +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests/CMakeFiles/unit_test_basebead.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f csg/src/tests/CMakeFiles/unit_test_nblistgrid_3body.dir/build.make csg/src/tests/CMakeFiles/unit_test_nblistgrid_3body.dir/build +make -f csg/src/tests/CMakeFiles/unit_test_basebead.dir/build.make csg/src/tests/CMakeFiles/unit_test_basebead.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 42%] Building CXX object csg/src/tests/CMakeFiles/unit_test_nblistgrid_3body.dir/test_nblistgrid_3body.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DCSG_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/csg/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT csg/src/tests/CMakeFiles/unit_test_nblistgrid_3body.dir/test_nblistgrid_3body.cc.o -MF CMakeFiles/unit_test_nblistgrid_3body.dir/test_nblistgrid_3body.cc.o.d -o CMakeFiles/unit_test_nblistgrid_3body.dir/test_nblistgrid_3body.cc.o -c /build/reproducible-path/votca-2022.1/csg/src/tests/test_nblistgrid_3body.cc -[ 43%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/calculators/ianalyze.cc.o +[ 41%] Building CXX object csg/src/tests/CMakeFiles/unit_test_basebead.dir/test_basebead.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DCSG_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/csg/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT csg/src/tests/CMakeFiles/unit_test_basebead.dir/test_basebead.cc.o -MF CMakeFiles/unit_test_basebead.dir/test_basebead.cc.o.d -o CMakeFiles/unit_test_basebead.dir/test_basebead.cc.o -c /build/reproducible-path/votca-2022.1/csg/src/tests/test_basebead.cc +[ 42%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/calculators/ianalyze.cc.o cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/calculators/ianalyze.cc.o -MF CMakeFiles/votca_xtp.dir/calculators/ianalyze.cc.o.d -o CMakeFiles/votca_xtp.dir/calculators/ianalyze.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/calculators/ianalyze.cc -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 43%] Built target votca_csg_boltzmann -make -f csg/src/tests/CMakeFiles/unit_test_boundarycondition.dir/build.make csg/src/tests/CMakeFiles/unit_test_boundarycondition.dir/depend -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests/CMakeFiles/unit_test_boundarycondition.dir/DependInfo.cmake --color= -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f csg/src/tests/CMakeFiles/unit_test_boundarycondition.dir/build.make csg/src/tests/CMakeFiles/unit_test_boundarycondition.dir/build -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 43%] Building CXX object csg/src/tests/CMakeFiles/unit_test_boundarycondition.dir/test_boundarycondition.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DCSG_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/csg/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT csg/src/tests/CMakeFiles/unit_test_boundarycondition.dir/test_boundarycondition.cc.o -MF CMakeFiles/unit_test_boundarycondition.dir/test_boundarycondition.cc.o.d -o CMakeFiles/unit_test_boundarycondition.dir/test_boundarycondition.cc.o -c /build/reproducible-path/votca-2022.1/csg/src/tests/test_boundarycondition.cc -In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:34, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/segment.h:30, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/qmpair.h:32, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/qmnblist.h:30, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/topology.h:31, - from /build/reproducible-path/votca-2022.1/xtp/src/libxtp/calculators/eanalyze.h:36, - from /build/reproducible-path/votca-2022.1/xtp/src/libxtp/calculators/eanalyze.cc:19: -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 81 | loc_ = loc; - | ^~~ -In file included from /usr/include/hdf5/serial/H5Cpp.h:47, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:25: -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/orbitals.h:31, @@ -4807,6 +4680,26 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ +[ 42%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/calculators/kmclifetime.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/calculators/kmclifetime.cc.o -MF CMakeFiles/votca_xtp.dir/calculators/kmclifetime.cc.o.d -o CMakeFiles/votca_xtp.dir/calculators/kmclifetime.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/calculators/kmclifetime.cc +In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:34, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/segment.h:30, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/qmpair.h:32, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/qmnblist.h:30, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/topology.h:31, + from /build/reproducible-path/votca-2022.1/xtp/src/libxtp/calculators/eanalyze.h:36, + from /build/reproducible-path/votca-2022.1/xtp/src/libxtp/calculators/eanalyze.cc:19: +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 81 | loc_ = loc; + | ^~~ +In file included from /usr/include/hdf5/serial/H5Cpp.h:47, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:25: +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] @@ -4862,19 +4755,9 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ -[ 43%] Linking CXX executable unit_test_beadmotif_algorithms -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_beadmotif_algorithms.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_beadmotif_algorithms.dir/test_beadmotif_algorithms.cc.o -o unit_test_beadmotif_algorithms -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools ../libcsg/libvotca_csg.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 43%] Built target unit_test_beadmotif_algorithms -make -f csg/src/tests/CMakeFiles/unit_test_pdbreader.dir/build.make csg/src/tests/CMakeFiles/unit_test_pdbreader.dir/depend -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests/CMakeFiles/unit_test_pdbreader.dir/DependInfo.cmake --color= -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f csg/src/tests/CMakeFiles/unit_test_pdbreader.dir/build.make csg/src/tests/CMakeFiles/unit_test_pdbreader.dir/build -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 43%] Building CXX object csg/src/tests/CMakeFiles/unit_test_pdbreader.dir/test_pdbreader.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DCSG_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/csg/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT csg/src/tests/CMakeFiles/unit_test_pdbreader.dir/test_pdbreader.cc.o -MF CMakeFiles/unit_test_pdbreader.dir/test_pdbreader.cc.o.d -o CMakeFiles/unit_test_pdbreader.dir/test_pdbreader.cc.o -c /build/reproducible-path/votca-2022.1/csg/src/tests/test_pdbreader.cc +[ 42%] Linking CXX executable radii/csg_radii +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps && /usr/bin/cmake -E cmake_link_script CMakeFiles/radii.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/radii.dir/radii/radii.cc.o -o radii/csg_radii -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools: ../libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::Atom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::Atom]' /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here @@ -4927,6 +4810,60 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ +In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, + from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, + from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, + from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, + from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, + from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, + from /usr/include/boost/shared_ptr.hpp:17, + from /usr/include/boost/format/alt_sstream.hpp:22, + from /usr/include/boost/format/internals.hpp:24, + from /usr/include/boost/format.hpp:38, + from /build/reproducible-path/votca-2022.1/xtp/src/libxtp/calculators/kmclifetime.cc:23: +/usr/include/boost/progress.hpp:23:1: note: '#pragma message: This header is deprecated. Use the facilities in or instead.' + 23 | BOOST_HEADER_DEPRECATED( "the facilities in or " ) + | ^~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/boost/timer.hpp:21:1: note: '#pragma message: This header is deprecated. Use the facilities in instead.' + 21 | BOOST_HEADER_DEPRECATED( "the facilities in " ) + | ^~~~~~~~~~~~~~~~~~~~~~~ +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 42%] Built target radii +make -f csg/src/tests/CMakeFiles/unit_test_beadmotif_algorithms.dir/build.make csg/src/tests/CMakeFiles/unit_test_beadmotif_algorithms.dir/depend +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 162 | attr = loc.createAttribute(name, *dataType, dp); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 164 | attr = loc.openAttribute(name); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests/CMakeFiles/unit_test_beadmotif_algorithms.dir/DependInfo.cmake --color= +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f csg/src/tests/CMakeFiles/unit_test_beadmotif_algorithms.dir/build.make csg/src/tests/CMakeFiles/unit_test_beadmotif_algorithms.dir/build +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 42%] Building CXX object csg/src/tests/CMakeFiles/unit_test_beadmotif_algorithms.dir/test_beadmotif_algorithms.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DCSG_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/csg/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT csg/src/tests/CMakeFiles/unit_test_beadmotif_algorithms.dir/test_beadmotif_algorithms.cc.o -MF CMakeFiles/unit_test_beadmotif_algorithms.dir/test_beadmotif_algorithms.cc.o.d -o CMakeFiles/unit_test_beadmotif_algorithms.dir/test_beadmotif_algorithms.cc.o -c /build/reproducible-path/votca-2022.1/csg/src/tests/test_beadmotif_algorithms.cc +[ 42%] Linking CXX executable csg_imc_solve +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/csg_imc_solve.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/csg_imc_solve.dir/csg_imc_solve.cc.o -o csg_imc_solve -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools: ../libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 42%] Built target csg_imc_solve +make -f csg/src/tests/CMakeFiles/unit_test_beadmotif_base.dir/build.make csg/src/tests/CMakeFiles/unit_test_beadmotif_base.dir/depend +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests/CMakeFiles/unit_test_beadmotif_base.dir/DependInfo.cmake --color= +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f csg/src/tests/CMakeFiles/unit_test_beadmotif_base.dir/build.make csg/src/tests/CMakeFiles/unit_test_beadmotif_base.dir/build +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 42%] Building CXX object csg/src/tests/CMakeFiles/unit_test_beadmotif_base.dir/test_beadmotif_base.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DCSG_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/csg/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT csg/src/tests/CMakeFiles/unit_test_beadmotif_base.dir/test_beadmotif_base.cc.o -MF CMakeFiles/unit_test_beadmotif_base.dir/test_beadmotif_base.cc.o.d -o CMakeFiles/unit_test_beadmotif_base.dir/test_beadmotif_base.cc.o -c /build/reproducible-path/votca-2022.1/csg/src/tests/test_beadmotif_base.cc In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:34, @@ -4985,6 +4922,63 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ +In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:34, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/segment.h:30, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/qmpair.h:32, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/gnode.h:25, + from /build/reproducible-path/votca-2022.1/xtp/src/libxtp/calculators/kmclifetime.cc:32: +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 81 | loc_ = loc; + | ^~~ +In file included from /usr/include/hdf5/serial/H5Cpp.h:47, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:25: +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ +In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:31: +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 178 | attr = loc.createAttribute(name, *strType, dp); + | ^ +In file included from /usr/include/hdf5/serial/H5Cpp.h:34: +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 180 | attr = loc.openAttribute(name); + | ^ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 278 | parent = loc.createGroup(name); + | ^ +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 280 | parent = loc.openGroup(name); + | ^ +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 294 | parent = loc.createGroup(name); + | ^ +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 296 | parent = loc.openGroup(name); + | ^ +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] @@ -5049,35 +5043,6 @@ /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::Atom]' -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 162 | attr = loc.createAttribute(name, *dataType, dp); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 164 | attr = loc.openAttribute(name); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -[ 43%] Linking CXX executable unit_test_beadstructure_algorithms -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_beadstructure_algorithms.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_beadstructure_algorithms.dir/test_beadstructure_algorithms.cc.o -o unit_test_beadstructure_algorithms -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools ../libcsg/libvotca_csg.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 43%] Built target unit_test_beadstructure_algorithms -make -f csg/src/tests/CMakeFiles/unit_test_tabulatedpotential.dir/build.make csg/src/tests/CMakeFiles/unit_test_tabulatedpotential.dir/depend -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests/CMakeFiles/unit_test_tabulatedpotential.dir/DependInfo.cmake --color= -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f csg/src/tests/CMakeFiles/unit_test_tabulatedpotential.dir/build.make csg/src/tests/CMakeFiles/unit_test_tabulatedpotential.dir/build -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 43%] Building CXX object csg/src/tests/CMakeFiles/unit_test_tabulatedpotential.dir/test_tabulatedpotential.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DCSG_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/csg/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT csg/src/tests/CMakeFiles/unit_test_tabulatedpotential.dir/test_tabulatedpotential.cc.o -MF CMakeFiles/unit_test_tabulatedpotential.dir/test_tabulatedpotential.cc.o.d -o CMakeFiles/unit_test_tabulatedpotential.dir/test_tabulatedpotential.cc.o -c /build/reproducible-path/votca-2022.1/csg/src/tests/test_tabulatedpotential.cc In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:34, @@ -5095,6 +5060,22 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::Atom]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 162 | attr = loc.createAttribute(name, *dataType, dp); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 164 | attr = loc.openAttribute(name); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] @@ -5136,19 +5117,60 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ -[ 43%] Linking CXX executable unit_test_beadstructure_base -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_beadstructure_base.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_beadstructure_base.dir/test_beadstructure_base.cc.o -o unit_test_beadstructure_base -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools ../libcsg/libvotca_csg.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 43%] Built target unit_test_beadstructure_base -make -f csg/src/tests/CMakeFiles/unit_test_triplelist.dir/build.make csg/src/tests/CMakeFiles/unit_test_triplelist.dir/depend -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests/CMakeFiles/unit_test_triplelist.dir/DependInfo.cmake --color= -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f csg/src/tests/CMakeFiles/unit_test_triplelist.dir/build.make csg/src/tests/CMakeFiles/unit_test_triplelist.dir/build -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 43%] Building CXX object csg/src/tests/CMakeFiles/unit_test_triplelist.dir/test_triplelist.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DCSG_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/csg/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT csg/src/tests/CMakeFiles/unit_test_triplelist.dir/test_triplelist.cc.o -MF CMakeFiles/unit_test_triplelist.dir/test_triplelist.cc.o.d -o CMakeFiles/unit_test_triplelist.dir/test_triplelist.cc.o -c /build/reproducible-path/votca-2022.1/csg/src/tests/test_triplelist.cc +[ 42%] Building CXX object csg/src/csgapps/CMakeFiles/partial_rdf.dir/partial_rdf/rdf_calculator.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT csg/src/csgapps/CMakeFiles/partial_rdf.dir/partial_rdf/rdf_calculator.cc.o -MF CMakeFiles/partial_rdf.dir/partial_rdf/rdf_calculator.cc.o.d -o CMakeFiles/partial_rdf.dir/partial_rdf/rdf_calculator.cc.o -c /build/reproducible-path/votca-2022.1/csg/src/csgapps/partial_rdf/rdf_calculator.cc +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::Atom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::Atom]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 42 | class CptTable { + | ^~~~~~~~ +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] + 42 | class CptTable { + | ^~~~~~~~ +In file included from /usr/include/hdf5/serial/H5Cpp.h:42: +/usr/include/hdf5/serial/H5CompType.h:40:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' + 40 | CompType(const CompType &original); + | ^~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] + 42 | class CptTable { + | ^~~~~~~~ +In file included from /usr/include/hdf5/serial/H5Cpp.h:26: +/usr/include/hdf5/serial/H5DcreatProp.h:137:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' + 137 | DSetCreatPropList(const DSetCreatPropList &orig); + | ^~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5DcreatProp.h:29:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] + 29 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { + | ^~~~~~~~~~~~~~~~~ +In file included from /usr/include/hdf5/serial/H5Cpp.h:25: +/usr/include/hdf5/serial/H5OcreatProp.h:53:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' + 53 | ObjCreatPropList(const ObjCreatPropList &original); + | ^~~~~~~~~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here + 42 | class CptTable { + | ^~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here + 132 | table = CptTable(name, sizeof(typename T::data), loc_); + | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::Atom]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 162 | attr = loc.createAttribute(name, *dataType, dp); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 164 | attr = loc.openAttribute(name); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] @@ -5163,6 +5185,18 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 42%] Built target votca_csg_boltzmann +make -f csg/src/tests/CMakeFiles/unit_test_beadmotif_connector.dir/build.make csg/src/tests/CMakeFiles/unit_test_beadmotif_connector.dir/depend +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests/CMakeFiles/unit_test_beadmotif_connector.dir/DependInfo.cmake --color= +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f csg/src/tests/CMakeFiles/unit_test_beadmotif_connector.dir/build.make csg/src/tests/CMakeFiles/unit_test_beadmotif_connector.dir/build +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 42%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/calculators/kmcmultiple.cc.o +[ 42%] Building CXX object csg/src/tests/CMakeFiles/unit_test_beadmotif_connector.dir/test_beadmotif_connector.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DCSG_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/csg/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT csg/src/tests/CMakeFiles/unit_test_beadmotif_connector.dir/test_beadmotif_connector.cc.o -MF CMakeFiles/unit_test_beadmotif_connector.dir/test_beadmotif_connector.cc.o.d -o CMakeFiles/unit_test_beadmotif_connector.dir/test_beadmotif_connector.cc.o -c /build/reproducible-path/votca-2022.1/csg/src/tests/test_beadmotif_connector.cc +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/calculators/kmcmultiple.cc.o -MF CMakeFiles/votca_xtp.dir/calculators/kmcmultiple.cc.o.d -o CMakeFiles/votca_xtp.dir/calculators/kmcmultiple.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/calculators/kmcmultiple.cc /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::Atom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::Atom]' /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here @@ -5215,92 +5249,39 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ -[ 43%] Linking CXX executable unit_test_boundarycondition -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_boundarycondition.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_boundarycondition.dir/test_boundarycondition.cc.o -o unit_test_boundarycondition -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools ../libcsg/libvotca_csg.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a -[ 43%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/calculators/kmclifetime.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/calculators/kmclifetime.cc.o -MF CMakeFiles/votca_xtp.dir/calculators/kmclifetime.cc.o.d -o CMakeFiles/votca_xtp.dir/calculators/kmclifetime.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/calculators/kmclifetime.cc -[ 43%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/calculators/kmcmultiple.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/calculators/kmcmultiple.cc.o -MF CMakeFiles/votca_xtp.dir/calculators/kmcmultiple.cc.o.d -o CMakeFiles/votca_xtp.dir/calculators/kmcmultiple.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/calculators/kmcmultiple.cc -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 43%] Built target unit_test_boundarycondition -make -f csg/share/template/CMakeFiles/template_serial.dir/build.make csg/share/template/CMakeFiles/template_serial.dir/depend -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/share/template /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/template /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/template/CMakeFiles/template_serial.dir/DependInfo.cmake --color= -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f csg/share/template/CMakeFiles/template_serial.dir/build.make csg/share/template/CMakeFiles/template_serial.dir/build -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 43%] Building CXX object csg/share/template/CMakeFiles/template_serial.dir/template_serial.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/template && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT csg/share/template/CMakeFiles/template_serial.dir/template_serial.cc.o -MF CMakeFiles/template_serial.dir/template_serial.cc.o.d -o CMakeFiles/template_serial.dir/template_serial.cc.o -c /build/reproducible-path/votca-2022.1/csg/share/template/template_serial.cc -[ 43%] Linking CXX executable partial_rdf/csg_partial_rdf -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps && /usr/bin/cmake -E cmake_link_script CMakeFiles/partial_rdf.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/partial_rdf.dir/partial_rdf/partial_rdf.cc.o CMakeFiles/partial_rdf.dir/partial_rdf/rdf_calculator.cc.o -o partial_rdf/csg_partial_rdf -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools: ../libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 43%] Built target partial_rdf -make -f csg/share/template/CMakeFiles/template_threaded.dir/build.make csg/share/template/CMakeFiles/template_threaded.dir/depend -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/share/template /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/template /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/template/CMakeFiles/template_threaded.dir/DependInfo.cmake --color= -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f csg/share/template/CMakeFiles/template_threaded.dir/build.make csg/share/template/CMakeFiles/template_threaded.dir/build -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 45%] Building CXX object csg/share/template/CMakeFiles/template_threaded.dir/template_threaded.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/template && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT csg/share/template/CMakeFiles/template_threaded.dir/template_threaded.cc.o -MF CMakeFiles/template_threaded.dir/template_threaded.cc.o.d -o CMakeFiles/template_threaded.dir/template_threaded.cc.o -c /build/reproducible-path/votca-2022.1/csg/share/template/template_threaded.cc -[ 45%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/calculators/neighborlist.cc.o +[ 42%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/calculators/neighborlist.cc.o cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/calculators/neighborlist.cc.o -MF CMakeFiles/votca_xtp.dir/calculators/neighborlist.cc.o.d -o CMakeFiles/votca_xtp.dir/calculators/neighborlist.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/calculators/neighborlist.cc -In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, - from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, - from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, - from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, - from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, - from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, - from /usr/include/boost/shared_ptr.hpp:17, - from /usr/include/boost/format/alt_sstream.hpp:22, - from /usr/include/boost/format/internals.hpp:24, - from /usr/include/boost/format.hpp:38, - from /build/reproducible-path/votca-2022.1/xtp/src/libxtp/calculators/kmclifetime.cc:23: -/usr/include/boost/progress.hpp:23:1: note: '#pragma message: This header is deprecated. Use the facilities in or instead.' - 23 | BOOST_HEADER_DEPRECATED( "the facilities in or " ) - | ^~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/boost/timer.hpp:21:1: note: '#pragma message: This header is deprecated. Use the facilities in instead.' - 21 | BOOST_HEADER_DEPRECATED( "the facilities in " ) - | ^~~~~~~~~~~~~~~~~~~~~~~ -[ 45%] Linking CXX executable unit_test_interaction -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_interaction.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_interaction.dir/test_interaction.cc.o -o unit_test_interaction -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools ../libcsg/libvotca_csg.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 45%] Built target unit_test_interaction -make -f csg/src/tools/CMakeFiles/csg_reupdate_manpage.dir/build.make csg/src/tools/CMakeFiles/csg_reupdate_manpage.dir/depend -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/CMakeFiles/csg_reupdate_manpage.dir/DependInfo.cmake --color= -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f csg/src/tools/CMakeFiles/csg_reupdate_manpage.dir/build.make csg/src/tools/CMakeFiles/csg_reupdate_manpage.dir/build -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 45%] Building csg_reupdate manpage -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools && ../../../tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/csg_reupdate --format groff --out csg_reupdate.man -[ 45%] Linking CXX executable unit_test_csg_topology -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_csg_topology.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_csg_topology.dir/test_csg_topology.cc.o -o unit_test_csg_topology -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools ../libcsg/libvotca_csg.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a +[ 42%] Linking CXX executable sphericalorder/csg_sphericalorder +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps && /usr/bin/cmake -E cmake_link_script CMakeFiles/sphericalorder.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/sphericalorder.dir/sphericalorder/sphericalorder.cc.o -o sphericalorder/csg_sphericalorder -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools: ../libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a +[ 42%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/calculators/vaverage.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/calculators/vaverage.cc.o -MF CMakeFiles/votca_xtp.dir/calculators/vaverage.cc.o.d -o CMakeFiles/votca_xtp.dir/calculators/vaverage.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/calculators/vaverage.cc make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 45%] Built target csg_reupdate_manpage -make -f csg/src/tools/CMakeFiles/csg_map_manpage.dir/build.make csg/src/tools/CMakeFiles/csg_map_manpage.dir/depend +[ 42%] Built target sphericalorder +make -f csg/src/tests/CMakeFiles/unit_test_beadstructure_base.dir/build.make csg/src/tests/CMakeFiles/unit_test_beadstructure_base.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/CMakeFiles/csg_map_manpage.dir/DependInfo.cmake --color= +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests/CMakeFiles/unit_test_beadstructure_base.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f csg/src/tools/CMakeFiles/csg_map_manpage.dir/build.make csg/src/tools/CMakeFiles/csg_map_manpage.dir/build +make -f csg/src/tests/CMakeFiles/unit_test_beadstructure_base.dir/build.make csg/src/tests/CMakeFiles/unit_test_beadstructure_base.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 45%] Building csg_map manpage -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools && ../../../tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/csg_map --format groff --out csg_map.man +[ 42%] Building CXX object csg/src/tests/CMakeFiles/unit_test_beadstructure_base.dir/test_beadstructure_base.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DCSG_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/csg/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT csg/src/tests/CMakeFiles/unit_test_beadstructure_base.dir/test_beadstructure_base.cc.o -MF CMakeFiles/unit_test_beadstructure_base.dir/test_beadstructure_base.cc.o.d -o CMakeFiles/unit_test_beadstructure_base.dir/test_beadstructure_base.cc.o -c /build/reproducible-path/votca-2022.1/csg/src/tests/test_beadstructure_base.cc +[ 42%] Linking CXX executable unit_test_beadtriple +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_beadtriple.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_beadtriple.dir/test_beadtriple.cc.o -o unit_test_beadtriple -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools ../libcsg/libvotca_csg.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 45%] Linking CXX executable unit_test_nblist_3body -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_nblist_3body.dir/link.txt --verbose=1 -[ 45%] Built target csg_map_manpage -make -f csg/src/tools/CMakeFiles/csg_dump_manpage.dir/build.make csg/src/tools/CMakeFiles/csg_dump_manpage.dir/depend +[ 42%] Built target unit_test_beadtriple +make -f csg/src/tests/CMakeFiles/unit_test_beadstructure_algorithms.dir/build.make csg/src/tests/CMakeFiles/unit_test_beadstructure_algorithms.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/CMakeFiles/csg_dump_manpage.dir/DependInfo.cmake --color= -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_nblist_3body.dir/test_nblist_3body.cc.o -o unit_test_nblist_3body -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools ../libcsg/libvotca_csg.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests/CMakeFiles/unit_test_beadstructure_algorithms.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f csg/src/tools/CMakeFiles/csg_dump_manpage.dir/build.make csg/src/tools/CMakeFiles/csg_dump_manpage.dir/build +make -f csg/src/tests/CMakeFiles/unit_test_beadstructure_algorithms.dir/build.make csg/src/tests/CMakeFiles/unit_test_beadstructure_algorithms.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 43%] Building CXX object csg/src/tests/CMakeFiles/unit_test_beadstructure_algorithms.dir/test_beadstructure_algorithms.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DCSG_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/csg/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT csg/src/tests/CMakeFiles/unit_test_beadstructure_algorithms.dir/test_beadstructure_algorithms.cc.o -MF CMakeFiles/unit_test_beadstructure_algorithms.dir/test_beadstructure_algorithms.cc.o.d -o CMakeFiles/unit_test_beadstructure_algorithms.dir/test_beadstructure_algorithms.cc.o -c /build/reproducible-path/votca-2022.1/csg/src/tests/test_beadstructure_algorithms.cc +[ 43%] Linking CXX executable unit_test_bead +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_bead.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_bead.dir/test_bead.cc.o -o unit_test_bead -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools ../libcsg/libvotca_csg.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -5318,175 +5299,44 @@ /usr/include/boost/timer.hpp:21:1: note: '#pragma message: This header is deprecated. Use the facilities in instead.' 21 | BOOST_HEADER_DEPRECATED( "the facilities in " ) | ^~~~~~~~~~~~~~~~~~~~~~~ -[ 45%] Building csg_dump manpage -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools && ../../../tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/csg_dump --format groff --out csg_dump.man -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 45%] Built target unit_test_csg_topology -make -f csg/src/tools/CMakeFiles/csg_property_manpage.dir/build.make csg/src/tools/CMakeFiles/csg_property_manpage.dir/depend -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/CMakeFiles/csg_property_manpage.dir/DependInfo.cmake --color= -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f csg/src/tools/CMakeFiles/csg_property_manpage.dir/build.make csg/src/tools/CMakeFiles/csg_property_manpage.dir/build -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 45%] Building csg_property manpage -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools && ../../../tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/csg_property --format groff --out csg_property.man -[ 45%] Built target csg_dump_manpage -make -f csg/src/tools/CMakeFiles/csg_resample_manpage.dir/build.make csg/src/tools/CMakeFiles/csg_resample_manpage.dir/depend -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/CMakeFiles/csg_resample_manpage.dir/DependInfo.cmake --color= -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f csg/src/tools/CMakeFiles/csg_resample_manpage.dir/build.make csg/src/tools/CMakeFiles/csg_resample_manpage.dir/build -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 45%] Building csg_resample manpage -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools && ../../../tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/csg_resample --format groff --out csg_resample.man -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 45%] Built target csg_property_manpage -make -f csg/src/tools/CMakeFiles/csg_stat_manpage.dir/build.make csg/src/tools/CMakeFiles/csg_stat_manpage.dir/depend -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/CMakeFiles/csg_stat_manpage.dir/DependInfo.cmake --color= -[ 45%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/calculators/vaverage.cc.o -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f csg/src/tools/CMakeFiles/csg_stat_manpage.dir/build.make csg/src/tools/CMakeFiles/csg_stat_manpage.dir/build -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/calculators/vaverage.cc.o -MF CMakeFiles/votca_xtp.dir/calculators/vaverage.cc.o.d -o CMakeFiles/votca_xtp.dir/calculators/vaverage.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/calculators/vaverage.cc -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 45%] Building csg_stat manpage -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools && ../../../tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/csg_stat --format groff --out csg_stat.man -[ 46%] Linking CXX executable unit_test_lammpsdatareader -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_lammpsdatareader.dir/link.txt --verbose=1 -[ 46%] Built target csg_resample_manpage -make -f csg/src/tools/CMakeFiles/csg_fmatch_manpage.dir/build.make csg/src/tools/CMakeFiles/csg_fmatch_manpage.dir/depend -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_lammpsdatareader.dir/test_lammpsdatareader.cc.o -o unit_test_lammpsdatareader -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools ../libcsg/libvotca_csg.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/CMakeFiles/csg_fmatch_manpage.dir/DependInfo.cmake --color= -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f csg/src/tools/CMakeFiles/csg_fmatch_manpage.dir/build.make csg/src/tools/CMakeFiles/csg_fmatch_manpage.dir/build -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 46%] Building csg_fmatch manpage -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools && ../../../tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/csg_fmatch --format groff --out csg_fmatch.man -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 46%] Built target csg_stat_manpage -make -f csg/src/tools/CMakeFiles/csg_gmxtopol_manpage.dir/build.make csg/src/tools/CMakeFiles/csg_gmxtopol_manpage.dir/depend -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/CMakeFiles/csg_gmxtopol_manpage.dir/DependInfo.cmake --color= -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f csg/src/tools/CMakeFiles/csg_gmxtopol_manpage.dir/build.make csg/src/tools/CMakeFiles/csg_gmxtopol_manpage.dir/build -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 46%] Building csg_gmxtopol manpage -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools && ../../../tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/csg_gmxtopol --format groff --out csg_gmxtopol.man -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 46%] Built target csg_fmatch_manpage -make -f csg/src/tools/CMakeFiles/csg_dlptopol_manpage.dir/build.make csg/src/tools/CMakeFiles/csg_dlptopol_manpage.dir/depend -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/CMakeFiles/csg_dlptopol_manpage.dir/DependInfo.cmake --color= -[ 46%] Built target unit_test_nblist_3body -make -f csg/src/tools/CMakeFiles/csg_density_manpage.dir/build.make csg/src/tools/CMakeFiles/csg_density_manpage.dir/depend -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/CMakeFiles/csg_density_manpage.dir/DependInfo.cmake --color= -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f csg/src/tools/CMakeFiles/csg_dlptopol_manpage.dir/build.make csg/src/tools/CMakeFiles/csg_dlptopol_manpage.dir/build -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 43%] Linking CXX executable unit_test_basebead +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_basebead.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_basebead.dir/test_basebead.cc.o -o unit_test_basebead -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools ../libcsg/libvotca_csg.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f csg/src/tools/CMakeFiles/csg_density_manpage.dir/build.make csg/src/tools/CMakeFiles/csg_density_manpage.dir/build +[ 43%] Built target unit_test_bead +make -f csg/src/tests/CMakeFiles/unit_test_bondedstatistics.dir/build.make csg/src/tests/CMakeFiles/unit_test_bondedstatistics.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 46%] Building csg_dlptopol manpage -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools && ../../../tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/csg_dlptopol --format groff --out csg_dlptopol.man +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests/CMakeFiles/unit_test_bondedstatistics.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 47%] Building csg_density manpage -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools && ../../../tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/csg_density --format groff --out csg_density.man -[ 47%] Built target csg_gmxtopol_manpage -make -f csg/src/tools/CMakeFiles/csg_imc_solve_manpage.dir/build.make csg/src/tools/CMakeFiles/csg_imc_solve_manpage.dir/depend +make -f csg/src/tests/CMakeFiles/unit_test_bondedstatistics.dir/build.make csg/src/tests/CMakeFiles/unit_test_bondedstatistics.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/CMakeFiles/csg_imc_solve_manpage.dir/DependInfo.cmake --color= +[ 43%] Building CXX object csg/src/tests/CMakeFiles/unit_test_bondedstatistics.dir/test_bondedstatistics.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DCSG_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/csg/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT csg/src/tests/CMakeFiles/unit_test_bondedstatistics.dir/test_bondedstatistics.cc.o -MF CMakeFiles/unit_test_bondedstatistics.dir/test_bondedstatistics.cc.o.d -o CMakeFiles/unit_test_bondedstatistics.dir/test_bondedstatistics.cc.o -c /build/reproducible-path/votca-2022.1/csg/src/tests/test_bondedstatistics.cc make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f csg/src/tools/CMakeFiles/csg_imc_solve_manpage.dir/build.make csg/src/tools/CMakeFiles/csg_imc_solve_manpage.dir/build +[ 43%] Built target unit_test_basebead +make -f csg/src/tests/CMakeFiles/unit_test_csg_topology.dir/build.make csg/src/tests/CMakeFiles/unit_test_csg_topology.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 47%] Building csg_imc_solve manpage -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools && ../../../tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/csg_imc_solve --format groff --out csg_imc_solve.man -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests/CMakeFiles/unit_test_csg_topology.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 47%] Built target csg_density_manpage -make -f csg/src/csg_boltzmann/CMakeFiles/csg_boltzmann.dir/build.make csg/src/csg_boltzmann/CMakeFiles/csg_boltzmann.dir/depend +make -f csg/src/tests/CMakeFiles/unit_test_csg_topology.dir/build.make csg/src/tests/CMakeFiles/unit_test_csg_topology.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/csg_boltzmann /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csg_boltzmann /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csg_boltzmann/CMakeFiles/csg_boltzmann.dir/DependInfo.cmake --color= +[ 43%] Building CXX object csg/src/tests/CMakeFiles/unit_test_csg_topology.dir/test_csg_topology.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DCSG_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/csg/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT csg/src/tests/CMakeFiles/unit_test_csg_topology.dir/test_csg_topology.cc.o -MF CMakeFiles/unit_test_csg_topology.dir/test_csg_topology.cc.o.d -o CMakeFiles/unit_test_csg_topology.dir/test_csg_topology.cc.o -c /build/reproducible-path/votca-2022.1/csg/src/tests/test_csg_topology.cc +[ 43%] Linking CXX executable traj_force/csg_traj_force +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps && /usr/bin/cmake -E cmake_link_script CMakeFiles/traj_force.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/traj_force.dir/traj_force/traj_force.cc.o -o traj_force/csg_traj_force -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools: ../libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 47%] Built target csg_dlptopol_manpage -[ 47%] Built target unit_test_lammpsdatareader -make -f csg/src/csgapps/CMakeFiles/fluctuations_manpage.dir/build.make csg/src/csgapps/CMakeFiles/fluctuations_manpage.dir/depend +[ 43%] Built target traj_force +make -f csg/src/tests/CMakeFiles/unit_test_interaction.dir/build.make csg/src/tests/CMakeFiles/unit_test_interaction.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/csgapps /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps/CMakeFiles/fluctuations_manpage.dir/DependInfo.cmake --color= +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests/CMakeFiles/unit_test_interaction.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f csg/src/csg_boltzmann/CMakeFiles/csg_boltzmann.dir/build.make csg/src/csg_boltzmann/CMakeFiles/csg_boltzmann.dir/build +make -f csg/src/tests/CMakeFiles/unit_test_interaction.dir/build.make csg/src/tests/CMakeFiles/unit_test_interaction.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 47%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/checkpoint.cc.o +[ 43%] Building CXX object csg/src/tests/CMakeFiles/unit_test_interaction.dir/test_interaction.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DCSG_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/csg/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT csg/src/tests/CMakeFiles/unit_test_interaction.dir/test_interaction.cc.o -MF CMakeFiles/unit_test_interaction.dir/test_interaction.cc.o.d -o CMakeFiles/unit_test_interaction.dir/test_interaction.cc.o -c /build/reproducible-path/votca-2022.1/csg/src/tests/test_interaction.cc +[ 43%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/checkpoint.cc.o cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/checkpoint.cc.o -MF CMakeFiles/votca_xtp.dir/checkpoint.cc.o.d -o CMakeFiles/votca_xtp.dir/checkpoint.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/checkpoint.cc -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f csg/src/csgapps/CMakeFiles/fluctuations_manpage.dir/build.make csg/src/csgapps/CMakeFiles/fluctuations_manpage.dir/build -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 47%] Building CXX object csg/src/csg_boltzmann/CMakeFiles/csg_boltzmann.dir/main.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csg_boltzmann && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT csg/src/csg_boltzmann/CMakeFiles/csg_boltzmann.dir/main.cc.o -MF CMakeFiles/csg_boltzmann.dir/main.cc.o.d -o CMakeFiles/csg_boltzmann.dir/main.cc.o -c /build/reproducible-path/votca-2022.1/csg/src/csg_boltzmann/main.cc -[ 47%] Building csg_fluctuations manpage -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps && ../../../tools/scripts/votca_help2doc --name fluctuations/csg_fluctuations --format groff --out fluctuations.man -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 47%] Built target csg_imc_solve_manpage -make -f csg/src/csgapps/CMakeFiles/orientcorr_manpage.dir/build.make csg/src/csgapps/CMakeFiles/orientcorr_manpage.dir/depend -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/csgapps /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps/CMakeFiles/orientcorr_manpage.dir/DependInfo.cmake --color= -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f csg/src/csgapps/CMakeFiles/orientcorr_manpage.dir/build.make csg/src/csgapps/CMakeFiles/orientcorr_manpage.dir/build -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 47%] Building csg_orientcorr manpage -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps && ../../../tools/scripts/votca_help2doc --name orientcorr/csg_orientcorr --format groff --out orientcorr.man -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 47%] Built target fluctuations_manpage -make -f csg/src/csgapps/CMakeFiles/part_dist_manpage.dir/build.make csg/src/csgapps/CMakeFiles/part_dist_manpage.dir/depend -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/csgapps /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps/CMakeFiles/part_dist_manpage.dir/DependInfo.cmake --color= -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f csg/src/csgapps/CMakeFiles/part_dist_manpage.dir/build.make csg/src/csgapps/CMakeFiles/part_dist_manpage.dir/build -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 47%] Building csg_part_dist manpage -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps && ../../../tools/scripts/votca_help2doc --name part_dist/csg_part_dist --format groff --out part_dist.man -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 47%] Built target orientcorr_manpage -make -f csg/src/csgapps/CMakeFiles/partial_rdf_manpage.dir/build.make csg/src/csgapps/CMakeFiles/partial_rdf_manpage.dir/depend -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/csgapps /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps/CMakeFiles/partial_rdf_manpage.dir/DependInfo.cmake --color= -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f csg/src/csgapps/CMakeFiles/partial_rdf_manpage.dir/build.make csg/src/csgapps/CMakeFiles/partial_rdf_manpage.dir/build -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 47%] Building csg_partial_rdf manpage -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps && ../../../tools/scripts/votca_help2doc --name partial_rdf/csg_partial_rdf --format groff --out partial_rdf.man -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 47%] Built target part_dist_manpage -make -f csg/src/csgapps/CMakeFiles/radii_manpage.dir/build.make csg/src/csgapps/CMakeFiles/radii_manpage.dir/depend -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/csgapps /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps/CMakeFiles/radii_manpage.dir/DependInfo.cmake --color= -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f csg/src/csgapps/CMakeFiles/radii_manpage.dir/build.make csg/src/csgapps/CMakeFiles/radii_manpage.dir/build -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 47%] Building csg_radii manpage -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps && ../../../tools/scripts/votca_help2doc --name radii/csg_radii --format groff --out radii.man -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 47%] Built target partial_rdf_manpage -make -f csg/src/csgapps/CMakeFiles/sphericalorder_manpage.dir/build.make csg/src/csgapps/CMakeFiles/sphericalorder_manpage.dir/depend -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/csgapps /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps/CMakeFiles/sphericalorder_manpage.dir/DependInfo.cmake --color= -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f csg/src/csgapps/CMakeFiles/sphericalorder_manpage.dir/build.make csg/src/csgapps/CMakeFiles/sphericalorder_manpage.dir/build -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 47%] Building csg_sphericalorder manpage -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps && ../../../tools/scripts/votca_help2doc --name sphericalorder/csg_sphericalorder --format groff --out sphericalorder.man -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 47%] Built target radii_manpage -make -f csg/src/csgapps/CMakeFiles/traj_force_manpage.dir/build.make csg/src/csgapps/CMakeFiles/traj_force_manpage.dir/depend -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/csgapps /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps/CMakeFiles/traj_force_manpage.dir/DependInfo.cmake --color= -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f csg/src/csgapps/CMakeFiles/traj_force_manpage.dir/build.make csg/src/csgapps/CMakeFiles/traj_force_manpage.dir/build -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:34, @@ -5503,8 +5353,6 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ -[ 47%] Building csg_traj_force manpage -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps && ../../../tools/scripts/votca_help2doc --name traj_force/csg_traj_force --format groff --out traj_force.man In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] @@ -5546,30 +5394,60 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 162 | attr = loc.createAttribute(name, *dataType, dp); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 164 | attr = loc.openAttribute(name); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +[ 43%] Linking CXX executable unit_test_beadmotif_base +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_beadmotif_base.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_beadmotif_base.dir/test_beadmotif_base.cc.o -o unit_test_beadmotif_base -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools ../libcsg/libvotca_csg.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 49%] Linking CXX executable unit_test_nblistgrid_3body -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_nblistgrid_3body.dir/link.txt --verbose=1 -[ 49%] Built target sphericalorder_manpage -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_nblistgrid_3body.dir/test_nblistgrid_3body.cc.o -o unit_test_nblistgrid_3body -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools ../libcsg/libvotca_csg.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a -make -f csg/src/tests/CMakeFiles/unit_test_bondedstatistics.dir/build.make csg/src/tests/CMakeFiles/unit_test_bondedstatistics.dir/depend +[ 43%] Built target unit_test_beadmotif_base +make -f csg/src/tests/CMakeFiles/unit_test_lammpsdatareader.dir/build.make csg/src/tests/CMakeFiles/unit_test_lammpsdatareader.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests/CMakeFiles/unit_test_bondedstatistics.dir/DependInfo.cmake --color= -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests/CMakeFiles/unit_test_lammpsdatareader.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f csg/src/tests/CMakeFiles/unit_test_bondedstatistics.dir/build.make csg/src/tests/CMakeFiles/unit_test_bondedstatistics.dir/build -[ 49%] Built target traj_force_manpage +make -f csg/src/tests/CMakeFiles/unit_test_lammpsdatareader.dir/build.make csg/src/tests/CMakeFiles/unit_test_lammpsdatareader.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 49%] Building CXX object csg/src/tests/CMakeFiles/unit_test_bondedstatistics.dir/test_bondedstatistics.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DCSG_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/csg/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT csg/src/tests/CMakeFiles/unit_test_bondedstatistics.dir/test_bondedstatistics.cc.o -MF CMakeFiles/unit_test_bondedstatistics.dir/test_bondedstatistics.cc.o.d -o CMakeFiles/unit_test_bondedstatistics.dir/test_bondedstatistics.cc.o -c /build/reproducible-path/votca-2022.1/csg/src/tests/test_bondedstatistics.cc -[ 49%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/classicalsegment.cc.o +[ 43%] Building CXX object csg/src/tests/CMakeFiles/unit_test_lammpsdatareader.dir/test_lammpsdatareader.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DCSG_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/csg/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT csg/src/tests/CMakeFiles/unit_test_lammpsdatareader.dir/test_lammpsdatareader.cc.o -MF CMakeFiles/unit_test_lammpsdatareader.dir/test_lammpsdatareader.cc.o.d -o CMakeFiles/unit_test_lammpsdatareader.dir/test_lammpsdatareader.cc.o -c /build/reproducible-path/votca-2022.1/csg/src/tests/test_lammpsdatareader.cc +[ 43%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/classicalsegment.cc.o cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/classicalsegment.cc.o -MF CMakeFiles/votca_xtp.dir/classicalsegment.cc.o.d -o CMakeFiles/votca_xtp.dir/classicalsegment.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/classicalsegment.cc In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:34, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/segment.h:30, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/qmpair.h:32, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/gnode.h:25, - from /build/reproducible-path/votca-2022.1/xtp/src/libxtp/calculators/kmclifetime.cc:32: + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/qmnblist.h:30, + from /build/reproducible-path/votca-2022.1/xtp/src/libxtp/calculators/neighborlist.h:30, + from /build/reproducible-path/votca-2022.1/xtp/src/libxtp/calculators/neighborlist.cc:23: +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 81 | loc_ = loc; + | ^~~ +In file included from /usr/include/hdf5/serial/H5Cpp.h:47, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:25: +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ +In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:34, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/segment.h:30, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/qmpair.h:32, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/qmnblist.h:30, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/topology.h:31, + from /build/reproducible-path/votca-2022.1/xtp/src/libxtp/calculators/vaverage.cc:21: /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; @@ -5620,10 +5498,47 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 49%] Built target unit_test_nblistgrid_3body -[ 49%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/couplingbase.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/couplingbase.cc.o -MF CMakeFiles/votca_xtp.dir/couplingbase.cc.o.d -o CMakeFiles/votca_xtp.dir/couplingbase.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/couplingbase.cc +In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:31: +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 178 | attr = loc.createAttribute(name, *strType, dp); + | ^ +In file included from /usr/include/hdf5/serial/H5Cpp.h:34: +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 180 | attr = loc.openAttribute(name); + | ^ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 278 | parent = loc.createGroup(name); + | ^ +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 280 | parent = loc.openGroup(name); + | ^ +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 294 | parent = loc.createGroup(name); + | ^ +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 296 | parent = loc.openGroup(name); + | ^ +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] @@ -5652,9 +5567,6 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ -[ 49%] Linking CXX executable unit_test_pdbreader -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_pdbreader.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_pdbreader.dir/test_pdbreader.cc.o -o unit_test_pdbreader -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools ../libcsg/libvotca_csg.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::Atom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::Atom]' /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here @@ -5691,91 +5603,6 @@ /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::Atom]' -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 162 | attr = loc.createAttribute(name, *dataType, dp); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 164 | attr = loc.openAttribute(name); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -[ 49%] Linking CXX executable unit_test_lammpsdumpreaderwriter -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_lammpsdumpreaderwriter.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_lammpsdumpreaderwriter.dir/test_lammpsdumpreaderwriter.cc.o -o unit_test_lammpsdumpreaderwriter -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools ../libcsg/libvotca_csg.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 49%] Built target unit_test_pdbreader -[ 49%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/cubefile_writer.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/cubefile_writer.cc.o -MF CMakeFiles/votca_xtp.dir/cubefile_writer.cc.o.d -o CMakeFiles/votca_xtp.dir/cubefile_writer.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/cubefile_writer.cc -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 49%] Built target unit_test_lammpsdumpreaderwriter -[ 50%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/davidsonsolver.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/davidsonsolver.cc.o -MF CMakeFiles/votca_xtp.dir/davidsonsolver.cc.o.d -o CMakeFiles/votca_xtp.dir/davidsonsolver.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/davidsonsolver.cc -In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:34, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/segment.h:30, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/qmpair.h:32, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/qmnblist.h:30, - from /build/reproducible-path/votca-2022.1/xtp/src/libxtp/calculators/neighborlist.h:30, - from /build/reproducible-path/votca-2022.1/xtp/src/libxtp/calculators/neighborlist.cc:23: -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 81 | loc_ = loc; - | ^~~ -In file included from /usr/include/hdf5/serial/H5Cpp.h:47, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:25: -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ -In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:31: -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 178 | attr = loc.createAttribute(name, *strType, dp); - | ^ -In file included from /usr/include/hdf5/serial/H5Cpp.h:34: -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 180 | attr = loc.openAttribute(name); - | ^ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 278 | parent = loc.createGroup(name); - | ^ -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 280 | parent = loc.openGroup(name); - | ^ -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 294 | parent = loc.createGroup(name); - | ^ -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 296 | parent = loc.openGroup(name); - | ^ -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::Atom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::Atom]' /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here @@ -5812,8 +5639,10 @@ /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::Atom]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -5894,6 +5723,32 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ +[ 43%] Linking CXX executable unit_test_beadmotif_algorithms +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_beadmotif_algorithms.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_beadmotif_algorithms.dir/test_beadmotif_algorithms.cc.o -o unit_test_beadmotif_algorithms -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools ../libcsg/libvotca_csg.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a +[ 43%] Linking CXX executable unit_test_beadmotif_connector +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_beadmotif_connector.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_beadmotif_connector.dir/test_beadmotif_connector.cc.o -o unit_test_beadmotif_connector -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools ../libcsg/libvotca_csg.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 43%] Built target unit_test_beadmotif_algorithms +make -f csg/src/tests/CMakeFiles/unit_test_lammpsdumpreaderwriter.dir/build.make csg/src/tests/CMakeFiles/unit_test_lammpsdumpreaderwriter.dir/depend +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests/CMakeFiles/unit_test_lammpsdumpreaderwriter.dir/DependInfo.cmake --color= +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f csg/src/tests/CMakeFiles/unit_test_lammpsdumpreaderwriter.dir/build.make csg/src/tests/CMakeFiles/unit_test_lammpsdumpreaderwriter.dir/build +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 43%] Building CXX object csg/src/tests/CMakeFiles/unit_test_lammpsdumpreaderwriter.dir/test_lammpsdumpreaderwriter.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DCSG_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/csg/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT csg/src/tests/CMakeFiles/unit_test_lammpsdumpreaderwriter.dir/test_lammpsdumpreaderwriter.cc.o -MF CMakeFiles/unit_test_lammpsdumpreaderwriter.dir/test_lammpsdumpreaderwriter.cc.o.d -o CMakeFiles/unit_test_lammpsdumpreaderwriter.dir/test_lammpsdumpreaderwriter.cc.o -c /build/reproducible-path/votca-2022.1/csg/src/tests/test_lammpsdumpreaderwriter.cc +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 43%] Built target unit_test_beadmotif_connector +make -f csg/src/tests/CMakeFiles/unit_test_nblist_3body.dir/build.make csg/src/tests/CMakeFiles/unit_test_nblist_3body.dir/depend +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests/CMakeFiles/unit_test_nblist_3body.dir/DependInfo.cmake --color= +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f csg/src/tests/CMakeFiles/unit_test_nblist_3body.dir/build.make csg/src/tests/CMakeFiles/unit_test_nblist_3body.dir/build +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 43%] Building CXX object csg/src/tests/CMakeFiles/unit_test_nblist_3body.dir/test_nblist_3body.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DCSG_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/csg/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT csg/src/tests/CMakeFiles/unit_test_nblist_3body.dir/test_nblist_3body.cc.o -MF CMakeFiles/unit_test_nblist_3body.dir/test_nblist_3body.cc.o.d -o CMakeFiles/unit_test_nblist_3body.dir/test_nblist_3body.cc.o -c /build/reproducible-path/votca-2022.1/csg/src/tests/test_nblist_3body.cc In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2022.1/xtp/src/libxtp/checkpoint.cc:33: @@ -5998,14 +5853,12 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ +[ 43%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/couplingbase.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/couplingbase.cc.o -MF CMakeFiles/votca_xtp.dir/couplingbase.cc.o.d -o CMakeFiles/votca_xtp.dir/couplingbase.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/couplingbase.cc In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:34, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/segment.h:30, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/qmpair.h:32, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/qmnblist.h:30, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/topology.h:31, - from /build/reproducible-path/votca-2022.1/xtp/src/libxtp/calculators/vaverage.cc:21: + from /build/reproducible-path/votca-2022.1/xtp/src/libxtp/classicalsegment.cc:29: /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; @@ -6056,19 +5909,9 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ -In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:34, - from /build/reproducible-path/votca-2022.1/xtp/src/libxtp/classicalsegment.cc:29: -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 81 | loc_ = loc; - | ^~~ -In file included from /usr/include/hdf5/serial/H5Cpp.h:47, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:25: -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ +[ 43%] Linking CXX executable unit_test_beadstructure_base +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_beadstructure_base.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_beadstructure_base.dir/test_beadstructure_base.cc.o -o unit_test_beadstructure_base -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools ../libcsg/libvotca_csg.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] @@ -6083,51 +5926,35 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ -In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:31: -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 178 | attr = loc.createAttribute(name, *strType, dp); - | ^ -In file included from /usr/include/hdf5/serial/H5Cpp.h:34: -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 180 | attr = loc.openAttribute(name); - | ^ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 278 | parent = loc.createGroup(name); - | ^ -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 280 | parent = loc.openGroup(name); - | ^ -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 294 | parent = loc.createGroup(name); - | ^ -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 296 | parent = loc.openGroup(name); - | ^ -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ -[ 50%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/dftcoupling.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/dftcoupling.cc.o -MF CMakeFiles/votca_xtp.dir/dftcoupling.cc.o.d -o CMakeFiles/votca_xtp.dir/dftcoupling.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/dftcoupling.cc -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::Atom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::Atom]' +[ 43%] Linking CXX executable unit_test_beadstructure_algorithms +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_beadstructure_algorithms.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_beadstructure_algorithms.dir/test_beadstructure_algorithms.cc.o -o unit_test_beadstructure_algorithms -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools ../libcsg/libvotca_csg.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 43%] Built target unit_test_beadstructure_base +make -f csg/src/tests/CMakeFiles/unit_test_nblistgrid_3body.dir/build.make csg/src/tests/CMakeFiles/unit_test_nblistgrid_3body.dir/depend +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests/CMakeFiles/unit_test_nblistgrid_3body.dir/DependInfo.cmake --color= +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f csg/src/tests/CMakeFiles/unit_test_nblistgrid_3body.dir/build.make csg/src/tests/CMakeFiles/unit_test_nblistgrid_3body.dir/build +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 43%] Building CXX object csg/src/tests/CMakeFiles/unit_test_nblistgrid_3body.dir/test_nblistgrid_3body.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DCSG_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/csg/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT csg/src/tests/CMakeFiles/unit_test_nblistgrid_3body.dir/test_nblistgrid_3body.cc.o -MF CMakeFiles/unit_test_nblistgrid_3body.dir/test_nblistgrid_3body.cc.o.d -o CMakeFiles/unit_test_nblistgrid_3body.dir/test_nblistgrid_3body.cc.o -c /build/reproducible-path/votca-2022.1/csg/src/tests/test_nblistgrid_3body.cc +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 43%] Built target unit_test_beadstructure_algorithms +make -f csg/src/tests/CMakeFiles/unit_test_boundarycondition.dir/build.make csg/src/tests/CMakeFiles/unit_test_boundarycondition.dir/depend +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests/CMakeFiles/unit_test_boundarycondition.dir/DependInfo.cmake --color= +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f csg/src/tests/CMakeFiles/unit_test_boundarycondition.dir/build.make csg/src/tests/CMakeFiles/unit_test_boundarycondition.dir/build +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 43%] Building CXX object csg/src/tests/CMakeFiles/unit_test_boundarycondition.dir/test_boundarycondition.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DCSG_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/csg/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT csg/src/tests/CMakeFiles/unit_test_boundarycondition.dir/test_boundarycondition.cc.o -MF CMakeFiles/unit_test_boundarycondition.dir/test_boundarycondition.cc.o.d -o CMakeFiles/unit_test_boundarycondition.dir/test_boundarycondition.cc.o -c /build/reproducible-path/votca-2022.1/csg/src/tests/test_boundarycondition.cc +[ 43%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/cubefile_writer.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/cubefile_writer.cc.o -MF CMakeFiles/votca_xtp.dir/cubefile_writer.cc.o.d -o CMakeFiles/votca_xtp.dir/cubefile_writer.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/cubefile_writer.cc +[ 45%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/davidsonsolver.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/davidsonsolver.cc.o -MF CMakeFiles/votca_xtp.dir/davidsonsolver.cc.o.d -o CMakeFiles/votca_xtp.dir/davidsonsolver.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/davidsonsolver.cc +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::StaticSite; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::StaticSite]' /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { @@ -6164,7 +5991,7 @@ | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::Atom]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::StaticSite]' /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); @@ -6178,27 +6005,8 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 162 | attr = loc.createAttribute(name, *dataType, dp); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 164 | attr = loc.openAttribute(name); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -[ 50%] Linking CXX executable unit_test_triplelist -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_triplelist.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_triplelist.dir/test_triplelist.cc.o -o unit_test_triplelist -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools ../libcsg/libvotca_csg.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 50%] Built target unit_test_triplelist -[ 50%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/dftengine/ERIs.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/dftengine/ERIs.cc.o -MF CMakeFiles/votca_xtp.dir/dftengine/ERIs.cc.o.d -o CMakeFiles/votca_xtp.dir/dftengine/ERIs.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/dftengine/ERIs.cc +[ 45%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/dftcoupling.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/dftcoupling.cc.o -MF CMakeFiles/votca_xtp.dir/dftcoupling.cc.o.d -o CMakeFiles/votca_xtp.dir/dftcoupling.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/dftcoupling.cc In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/orbitals.h:31, @@ -6254,17 +6062,35 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ -[ 50%] Linking CXX executable template_serial -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/template && /usr/bin/cmake -E cmake_link_script CMakeFiles/template_serial.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/template_serial.dir/template_serial.cc.o -o template_serial -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools ../../src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a +[ 46%] Linking CXX executable unit_test_bondedstatistics +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_bondedstatistics.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_bondedstatistics.dir/test_bondedstatistics.cc.o ../csg_boltzmann/CMakeFiles/votca_csg_boltzmann.dir/bondedstatistics.cc.o ../csg_boltzmann/CMakeFiles/votca_csg_boltzmann.dir/stdanalysis.cc.o ../csg_boltzmann/CMakeFiles/votca_csg_boltzmann.dir/tabulatedpotential.cc.o -o unit_test_bondedstatistics -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools ../libcsg/libvotca_csg.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 50%] Built target template_serial -[ 50%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/dftengine/adiis.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/dftengine/adiis.cc.o -MF CMakeFiles/votca_xtp.dir/dftengine/adiis.cc.o.d -o CMakeFiles/votca_xtp.dir/dftengine/adiis.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/dftengine/adiis.cc -[ 50%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/dftengine/convergenceacc.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/dftengine/convergenceacc.cc.o -MF CMakeFiles/votca_xtp.dir/dftengine/convergenceacc.cc.o.d -o CMakeFiles/votca_xtp.dir/dftengine/convergenceacc.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/dftengine/convergenceacc.cc -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::StaticSite; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::StaticSite]' +[ 46%] Built target unit_test_bondedstatistics +make -f csg/src/tests/CMakeFiles/unit_test_pdbreader.dir/build.make csg/src/tests/CMakeFiles/unit_test_pdbreader.dir/depend +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests/CMakeFiles/unit_test_pdbreader.dir/DependInfo.cmake --color= +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f csg/src/tests/CMakeFiles/unit_test_pdbreader.dir/build.make csg/src/tests/CMakeFiles/unit_test_pdbreader.dir/build +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 46%] Building CXX object csg/src/tests/CMakeFiles/unit_test_pdbreader.dir/test_pdbreader.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DCSG_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/csg/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT csg/src/tests/CMakeFiles/unit_test_pdbreader.dir/test_pdbreader.cc.o -MF CMakeFiles/unit_test_pdbreader.dir/test_pdbreader.cc.o.d -o CMakeFiles/unit_test_pdbreader.dir/test_pdbreader.cc.o -c /build/reproducible-path/votca-2022.1/csg/src/tests/test_pdbreader.cc +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 162 | attr = loc.createAttribute(name, *dataType, dp); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 164 | attr = loc.openAttribute(name); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { @@ -6301,7 +6127,7 @@ | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::StaticSite]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); @@ -6315,22 +6141,45 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 162 | attr = loc.createAttribute(name, *dataType, dp); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 164 | attr = loc.openAttribute(name); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -[ 50%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/dftengine/dftengine.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/dftengine/dftengine.cc.o -MF CMakeFiles/votca_xtp.dir/dftengine/dftengine.cc.o.d -o CMakeFiles/votca_xtp.dir/dftengine/dftengine.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/dftengine/dftengine.cc +[ 46%] Linking CXX executable unit_test_csg_topology +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_csg_topology.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_csg_topology.dir/test_csg_topology.cc.o -o unit_test_csg_topology -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools ../libcsg/libvotca_csg.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a +[ 46%] Linking CXX executable partial_rdf/csg_partial_rdf +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps && /usr/bin/cmake -E cmake_link_script CMakeFiles/partial_rdf.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/partial_rdf.dir/partial_rdf/partial_rdf.cc.o CMakeFiles/partial_rdf.dir/partial_rdf/rdf_calculator.cc.o -o partial_rdf/csg_partial_rdf -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools: ../libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 47%] Linking CXX executable unit_test_lammpsdatareader +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_lammpsdatareader.dir/link.txt --verbose=1 +[ 47%] Built target unit_test_csg_topology +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_lammpsdatareader.dir/test_lammpsdatareader.cc.o -o unit_test_lammpsdatareader -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools ../libcsg/libvotca_csg.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a +make -f csg/src/tests/CMakeFiles/unit_test_tabulatedpotential.dir/build.make csg/src/tests/CMakeFiles/unit_test_tabulatedpotential.dir/depend +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests/CMakeFiles/unit_test_tabulatedpotential.dir/DependInfo.cmake --color= +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f csg/src/tests/CMakeFiles/unit_test_tabulatedpotential.dir/build.make csg/src/tests/CMakeFiles/unit_test_tabulatedpotential.dir/build +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 47%] Building CXX object csg/src/tests/CMakeFiles/unit_test_tabulatedpotential.dir/test_tabulatedpotential.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DCSG_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/csg/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT csg/src/tests/CMakeFiles/unit_test_tabulatedpotential.dir/test_tabulatedpotential.cc.o -MF CMakeFiles/unit_test_tabulatedpotential.dir/test_tabulatedpotential.cc.o.d -o CMakeFiles/unit_test_tabulatedpotential.dir/test_tabulatedpotential.cc.o -c /build/reproducible-path/votca-2022.1/csg/src/tests/test_tabulatedpotential.cc +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 47%] Built target partial_rdf +make -f csg/src/tests/CMakeFiles/unit_test_triplelist.dir/build.make csg/src/tests/CMakeFiles/unit_test_triplelist.dir/depend +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests/CMakeFiles/unit_test_triplelist.dir/DependInfo.cmake --color= +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f csg/src/tests/CMakeFiles/unit_test_triplelist.dir/build.make csg/src/tests/CMakeFiles/unit_test_triplelist.dir/build +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 47%] Building CXX object csg/src/tests/CMakeFiles/unit_test_triplelist.dir/test_triplelist.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DCSG_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/csg/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT csg/src/tests/CMakeFiles/unit_test_triplelist.dir/test_triplelist.cc.o -MF CMakeFiles/unit_test_triplelist.dir/test_triplelist.cc.o.d -o CMakeFiles/unit_test_triplelist.dir/test_triplelist.cc.o -c /build/reproducible-path/votca-2022.1/csg/src/tests/test_triplelist.cc +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 47%] Built target unit_test_lammpsdatareader +make -f csg/share/template/CMakeFiles/template_serial.dir/build.make csg/share/template/CMakeFiles/template_serial.dir/depend +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/share/template /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/template /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/template/CMakeFiles/template_serial.dir/DependInfo.cmake --color= +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f csg/share/template/CMakeFiles/template_serial.dir/build.make csg/share/template/CMakeFiles/template_serial.dir/build +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 47%] Building CXX object csg/share/template/CMakeFiles/template_serial.dir/template_serial.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/template && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT csg/share/template/CMakeFiles/template_serial.dir/template_serial.cc.o -MF CMakeFiles/template_serial.dir/template_serial.cc.o.d -o CMakeFiles/template_serial.dir/template_serial.cc.o -c /build/reproducible-path/votca-2022.1/csg/share/template/template_serial.cc In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/orbitals.h:31, @@ -6386,36 +6235,6 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ -[ 50%] Linking CXX executable unit_test_tabulatedpotential -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_tabulatedpotential.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_tabulatedpotential.dir/test_tabulatedpotential.cc.o ../csg_boltzmann/CMakeFiles/votca_csg_boltzmann.dir/bondedstatistics.cc.o ../csg_boltzmann/CMakeFiles/votca_csg_boltzmann.dir/stdanalysis.cc.o ../csg_boltzmann/CMakeFiles/votca_csg_boltzmann.dir/tabulatedpotential.cc.o -o unit_test_tabulatedpotential -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools ../libcsg/libvotca_csg.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a -[ 50%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/dftengine/diis.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/dftengine/diis.cc.o -MF CMakeFiles/votca_xtp.dir/dftengine/diis.cc.o.d -o CMakeFiles/votca_xtp.dir/dftengine/diis.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/dftengine/diis.cc -[ 50%] Linking CXX executable template_threaded -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/template && /usr/bin/cmake -E cmake_link_script CMakeFiles/template_threaded.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/template_threaded.dir/template_threaded.cc.o -o template_threaded -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools ../../src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 162 | attr = loc.createAttribute(name, *dataType, dp); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 164 | attr = loc.openAttribute(name); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -[ 50%] Built target template_threaded -[ 50%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/ecpaobasis.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/ecpaobasis.cc.o -MF CMakeFiles/votca_xtp.dir/ecpaobasis.cc.o.d -o CMakeFiles/votca_xtp.dir/ecpaobasis.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/ecpaobasis.cc -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 50%] Built target unit_test_tabulatedpotential -[ 52%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/ecpbasisset.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/ecpbasisset.cc.o -MF CMakeFiles/votca_xtp.dir/ecpbasisset.cc.o.d -o CMakeFiles/votca_xtp.dir/ecpbasisset.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/ecpbasisset.cc /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here @@ -6468,8 +6287,138 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ -[ 52%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/eeinteractor.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/eeinteractor.cc.o -MF CMakeFiles/votca_xtp.dir/eeinteractor.cc.o.d -o CMakeFiles/votca_xtp.dir/eeinteractor.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/eeinteractor.cc +[ 47%] Linking CXX executable unit_test_interaction +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_interaction.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_interaction.dir/test_interaction.cc.o -o unit_test_interaction -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools ../libcsg/libvotca_csg.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 47%] Built target unit_test_interaction +make -f csg/share/template/CMakeFiles/template_threaded.dir/build.make csg/share/template/CMakeFiles/template_threaded.dir/depend +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/share/template /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/template /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/template/CMakeFiles/template_threaded.dir/DependInfo.cmake --color= +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f csg/share/template/CMakeFiles/template_threaded.dir/build.make csg/share/template/CMakeFiles/template_threaded.dir/build +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 49%] Building CXX object csg/share/template/CMakeFiles/template_threaded.dir/template_threaded.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/template && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT csg/share/template/CMakeFiles/template_threaded.dir/template_threaded.cc.o -MF CMakeFiles/template_threaded.dir/template_threaded.cc.o.d -o CMakeFiles/template_threaded.dir/template_threaded.cc.o -c /build/reproducible-path/votca-2022.1/csg/share/template/template_threaded.cc +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 162 | attr = loc.createAttribute(name, *dataType, dp); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 164 | attr = loc.openAttribute(name); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +[ 49%] Linking CXX executable unit_test_boundarycondition +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_boundarycondition.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_boundarycondition.dir/test_boundarycondition.cc.o -o unit_test_boundarycondition -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools ../libcsg/libvotca_csg.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 49%] Built target unit_test_boundarycondition +make -f csg/src/tools/CMakeFiles/csg_reupdate_manpage.dir/build.make csg/src/tools/CMakeFiles/csg_reupdate_manpage.dir/depend +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/CMakeFiles/csg_reupdate_manpage.dir/DependInfo.cmake --color= +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f csg/src/tools/CMakeFiles/csg_reupdate_manpage.dir/build.make csg/src/tools/CMakeFiles/csg_reupdate_manpage.dir/build +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 49%] Building csg_reupdate manpage +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools && ../../../tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/csg_reupdate --format groff --out csg_reupdate.man +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 49%] Built target csg_reupdate_manpage +make -f csg/src/tools/CMakeFiles/csg_map_manpage.dir/build.make csg/src/tools/CMakeFiles/csg_map_manpage.dir/depend +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/CMakeFiles/csg_map_manpage.dir/DependInfo.cmake --color= +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f csg/src/tools/CMakeFiles/csg_map_manpage.dir/build.make csg/src/tools/CMakeFiles/csg_map_manpage.dir/build +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 49%] Building csg_map manpage +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools && ../../../tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/csg_map --format groff --out csg_map.man +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 49%] Built target csg_map_manpage +make -f csg/src/tools/CMakeFiles/csg_dump_manpage.dir/build.make csg/src/tools/CMakeFiles/csg_dump_manpage.dir/depend +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/CMakeFiles/csg_dump_manpage.dir/DependInfo.cmake --color= +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f csg/src/tools/CMakeFiles/csg_dump_manpage.dir/build.make csg/src/tools/CMakeFiles/csg_dump_manpage.dir/build +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 49%] Building csg_dump manpage +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools && ../../../tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/csg_dump --format groff --out csg_dump.man +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 49%] Built target csg_dump_manpage +make -f csg/src/tools/CMakeFiles/csg_property_manpage.dir/build.make csg/src/tools/CMakeFiles/csg_property_manpage.dir/depend +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/CMakeFiles/csg_property_manpage.dir/DependInfo.cmake --color= +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f csg/src/tools/CMakeFiles/csg_property_manpage.dir/build.make csg/src/tools/CMakeFiles/csg_property_manpage.dir/build +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 49%] Building csg_property manpage +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools && ../../../tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/csg_property --format groff --out csg_property.man +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 49%] Built target csg_property_manpage +make -f csg/src/tools/CMakeFiles/csg_resample_manpage.dir/build.make csg/src/tools/CMakeFiles/csg_resample_manpage.dir/depend +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/CMakeFiles/csg_resample_manpage.dir/DependInfo.cmake --color= +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f csg/src/tools/CMakeFiles/csg_resample_manpage.dir/build.make csg/src/tools/CMakeFiles/csg_resample_manpage.dir/build +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 49%] Building csg_resample manpage +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools && ../../../tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/csg_resample --format groff --out csg_resample.man +[ 49%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/dftengine/ERIs.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/dftengine/ERIs.cc.o -MF CMakeFiles/votca_xtp.dir/dftengine/ERIs.cc.o.d -o CMakeFiles/votca_xtp.dir/dftengine/ERIs.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/dftengine/ERIs.cc +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 49%] Built target csg_resample_manpage +make -f csg/src/tools/CMakeFiles/csg_stat_manpage.dir/build.make csg/src/tools/CMakeFiles/csg_stat_manpage.dir/depend +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/CMakeFiles/csg_stat_manpage.dir/DependInfo.cmake --color= +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f csg/src/tools/CMakeFiles/csg_stat_manpage.dir/build.make csg/src/tools/CMakeFiles/csg_stat_manpage.dir/build +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 49%] Building csg_stat manpage +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools && ../../../tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/csg_stat --format groff --out csg_stat.man +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 49%] Built target csg_stat_manpage +make -f csg/src/tools/CMakeFiles/csg_fmatch_manpage.dir/build.make csg/src/tools/CMakeFiles/csg_fmatch_manpage.dir/depend +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/CMakeFiles/csg_fmatch_manpage.dir/DependInfo.cmake --color= +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f csg/src/tools/CMakeFiles/csg_fmatch_manpage.dir/build.make csg/src/tools/CMakeFiles/csg_fmatch_manpage.dir/build +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 49%] Building csg_fmatch manpage +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools && ../../../tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/csg_fmatch --format groff --out csg_fmatch.man +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 49%] Built target csg_fmatch_manpage +make -f csg/src/tools/CMakeFiles/csg_gmxtopol_manpage.dir/build.make csg/src/tools/CMakeFiles/csg_gmxtopol_manpage.dir/depend +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/CMakeFiles/csg_gmxtopol_manpage.dir/DependInfo.cmake --color= +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f csg/src/tools/CMakeFiles/csg_gmxtopol_manpage.dir/build.make csg/src/tools/CMakeFiles/csg_gmxtopol_manpage.dir/build +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 49%] Building csg_gmxtopol manpage +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools && ../../../tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/csg_gmxtopol --format groff --out csg_gmxtopol.man +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 49%] Built target csg_gmxtopol_manpage +make -f csg/src/tools/CMakeFiles/csg_dlptopol_manpage.dir/build.make csg/src/tools/CMakeFiles/csg_dlptopol_manpage.dir/depend +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/CMakeFiles/csg_dlptopol_manpage.dir/DependInfo.cmake --color= +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f csg/src/tools/CMakeFiles/csg_dlptopol_manpage.dir/build.make csg/src/tools/CMakeFiles/csg_dlptopol_manpage.dir/build +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 49%] Building csg_dlptopol manpage +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools && ../../../tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/csg_dlptopol --format groff --out csg_dlptopol.man +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 49%] Built target csg_dlptopol_manpage +make -f csg/src/tools/CMakeFiles/csg_density_manpage.dir/build.make csg/src/tools/CMakeFiles/csg_density_manpage.dir/depend +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/CMakeFiles/csg_density_manpage.dir/DependInfo.cmake --color= +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f csg/src/tools/CMakeFiles/csg_density_manpage.dir/build.make csg/src/tools/CMakeFiles/csg_density_manpage.dir/build +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 50%] Building csg_density manpage +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools && ../../../tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/csg_density --format groff --out csg_density.man /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here @@ -6522,23 +6471,6 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ -[ 52%] Linking CXX executable csg_boltzmann -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csg_boltzmann && /usr/bin/cmake -E cmake_link_script CMakeFiles/csg_boltzmann.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/csg_boltzmann.dir/main.cc.o CMakeFiles/votca_csg_boltzmann.dir/bondedstatistics.cc.o CMakeFiles/votca_csg_boltzmann.dir/stdanalysis.cc.o CMakeFiles/votca_csg_boltzmann.dir/tabulatedpotential.cc.o -o csg_boltzmann -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools: ../libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 52%] Built target csg_boltzmann -make -f csg/src/csg_boltzmann/CMakeFiles/csg_boltzmann_manpage.dir/build.make csg/src/csg_boltzmann/CMakeFiles/csg_boltzmann_manpage.dir/depend -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/csg_boltzmann /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csg_boltzmann /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csg_boltzmann/CMakeFiles/csg_boltzmann_manpage.dir/DependInfo.cmake --color= -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f csg/src/csg_boltzmann/CMakeFiles/csg_boltzmann_manpage.dir/build.make csg/src/csg_boltzmann/CMakeFiles/csg_boltzmann_manpage.dir/build -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 52%] Building csg_boltzmann manpage -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csg_boltzmann && ../../../tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csg_boltzmann/csg_boltzmann --format groff --out csg_boltzmann.man -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 52%] Built target csg_boltzmann_manpage -[ 52%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/energy_costfunction.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/energy_costfunction.cc.o -MF CMakeFiles/votca_xtp.dir/energy_costfunction.cc.o.d -o CMakeFiles/votca_xtp.dir/energy_costfunction.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/energy_costfunction.cc In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/orbitals.h:31, @@ -6554,6 +6486,11 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 50%] Built target csg_density_manpage +make -f csg/src/tools/CMakeFiles/csg_imc_solve_manpage.dir/build.make csg/src/tools/CMakeFiles/csg_imc_solve_manpage.dir/depend +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/CMakeFiles/csg_imc_solve_manpage.dir/DependInfo.cmake --color= In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] @@ -6569,6 +6506,8 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f csg/src/tools/CMakeFiles/csg_imc_solve_manpage.dir/build.make csg/src/tools/CMakeFiles/csg_imc_solve_manpage.dir/build /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); @@ -6582,6 +6521,7 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); @@ -6595,46 +6535,68 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 42 | class CptTable { - | ^~~~~~~~ -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] - 42 | class CptTable { - | ^~~~~~~~ -In file included from /usr/include/hdf5/serial/H5Cpp.h:42: -/usr/include/hdf5/serial/H5CompType.h:40:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' - 40 | CompType(const CompType &original); - | ^~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] - 42 | class CptTable { - | ^~~~~~~~ -In file included from /usr/include/hdf5/serial/H5Cpp.h:26: -/usr/include/hdf5/serial/H5DcreatProp.h:137:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' - 137 | DSetCreatPropList(const DSetCreatPropList &orig); - | ^~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5DcreatProp.h:29:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] - 29 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { - | ^~~~~~~~~~~~~~~~~ -In file included from /usr/include/hdf5/serial/H5Cpp.h:25: -/usr/include/hdf5/serial/H5OcreatProp.h:53:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' - 53 | ObjCreatPropList(const ObjCreatPropList &original); - | ^~~~~~~~~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here - 42 | class CptTable { - | ^~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here - 132 | table = CptTable(name, sizeof(typename T::data), loc_); - | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here +[ 50%] Building csg_imc_solve manpage +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools && ../../../tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/csg_imc_solve --format groff --out csg_imc_solve.man +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 50%] Built target csg_imc_solve_manpage +make -f csg/src/csg_boltzmann/CMakeFiles/csg_boltzmann.dir/build.make csg/src/csg_boltzmann/CMakeFiles/csg_boltzmann.dir/depend +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/csg_boltzmann /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csg_boltzmann /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csg_boltzmann/CMakeFiles/csg_boltzmann.dir/DependInfo.cmake --color= +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f csg/src/csg_boltzmann/CMakeFiles/csg_boltzmann.dir/build.make csg/src/csg_boltzmann/CMakeFiles/csg_boltzmann.dir/build +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 50%] Building CXX object csg/src/csg_boltzmann/CMakeFiles/csg_boltzmann.dir/main.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csg_boltzmann && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT csg/src/csg_boltzmann/CMakeFiles/csg_boltzmann.dir/main.cc.o -MF CMakeFiles/csg_boltzmann.dir/main.cc.o.d -o CMakeFiles/csg_boltzmann.dir/main.cc.o -c /build/reproducible-path/votca-2022.1/csg/src/csg_boltzmann/main.cc +[ 50%] Linking CXX executable unit_test_nblist_3body +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_nblist_3body.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_nblist_3body.dir/test_nblist_3body.cc.o -o unit_test_nblist_3body -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools ../libcsg/libvotca_csg.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a +[ 50%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/dftengine/adiis.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/dftengine/adiis.cc.o -MF CMakeFiles/votca_xtp.dir/dftengine/adiis.cc.o.d -o CMakeFiles/votca_xtp.dir/dftengine/adiis.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/dftengine/adiis.cc +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 50%] Built target unit_test_nblist_3body +make -f csg/src/csgapps/CMakeFiles/fluctuations_manpage.dir/build.make csg/src/csgapps/CMakeFiles/fluctuations_manpage.dir/depend +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/csgapps /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps/CMakeFiles/fluctuations_manpage.dir/DependInfo.cmake --color= +[ 50%] Linking CXX executable unit_test_lammpsdumpreaderwriter +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_lammpsdumpreaderwriter.dir/link.txt --verbose=1 +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f csg/src/csgapps/CMakeFiles/fluctuations_manpage.dir/build.make csg/src/csgapps/CMakeFiles/fluctuations_manpage.dir/build +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_lammpsdumpreaderwriter.dir/test_lammpsdumpreaderwriter.cc.o -o unit_test_lammpsdumpreaderwriter -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools ../libcsg/libvotca_csg.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a +[ 50%] Building csg_fluctuations manpage +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps && ../../../tools/scripts/votca_help2doc --name fluctuations/csg_fluctuations --format groff --out fluctuations.man +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 50%] Built target fluctuations_manpage +make -f csg/src/csgapps/CMakeFiles/orientcorr_manpage.dir/build.make csg/src/csgapps/CMakeFiles/orientcorr_manpage.dir/depend +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/csgapps /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps/CMakeFiles/orientcorr_manpage.dir/DependInfo.cmake --color= +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f csg/src/csgapps/CMakeFiles/orientcorr_manpage.dir/build.make csg/src/csgapps/CMakeFiles/orientcorr_manpage.dir/build +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 50%] Building csg_orientcorr manpage +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps && ../../../tools/scripts/votca_help2doc --name orientcorr/csg_orientcorr --format groff --out orientcorr.man +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 50%] Built target orientcorr_manpage +make -f csg/src/csgapps/CMakeFiles/part_dist_manpage.dir/build.make csg/src/csgapps/CMakeFiles/part_dist_manpage.dir/depend +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/csgapps /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps/CMakeFiles/part_dist_manpage.dir/DependInfo.cmake --color= +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f csg/src/csgapps/CMakeFiles/part_dist_manpage.dir/build.make csg/src/csgapps/CMakeFiles/part_dist_manpage.dir/build +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 50%] Building csg_part_dist manpage +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps && ../../../tools/scripts/votca_help2doc --name part_dist/csg_part_dist --format groff --out part_dist.man +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 50%] Built target part_dist_manpage +make -f csg/src/csgapps/CMakeFiles/partial_rdf_manpage.dir/build.make csg/src/csgapps/CMakeFiles/partial_rdf_manpage.dir/depend +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/csgapps /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps/CMakeFiles/partial_rdf_manpage.dir/DependInfo.cmake --color= +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f csg/src/csgapps/CMakeFiles/partial_rdf_manpage.dir/build.make csg/src/csgapps/CMakeFiles/partial_rdf_manpage.dir/build +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 50%] Building csg_partial_rdf manpage +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps && ../../../tools/scripts/votca_help2doc --name partial_rdf/csg_partial_rdf --format groff --out partial_rdf.man +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -6647,27 +6609,132 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ -[ 53%] Linking CXX executable unit_test_bondedstatistics -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_bondedstatistics.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_bondedstatistics.dir/test_bondedstatistics.cc.o ../csg_boltzmann/CMakeFiles/votca_csg_boltzmann.dir/bondedstatistics.cc.o ../csg_boltzmann/CMakeFiles/votca_csg_boltzmann.dir/stdanalysis.cc.o ../csg_boltzmann/CMakeFiles/votca_csg_boltzmann.dir/tabulatedpotential.cc.o -o unit_test_bondedstatistics -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools ../libcsg/libvotca_csg.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 162 | attr = loc.createAttribute(name, *dataType, dp); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 50%] Built target partial_rdf_manpage +make -f csg/src/csgapps/CMakeFiles/radii_manpage.dir/build.make csg/src/csgapps/CMakeFiles/radii_manpage.dir/depend +[ 50%] Built target unit_test_lammpsdumpreaderwriter +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/csgapps /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps/CMakeFiles/radii_manpage.dir/DependInfo.cmake --color= +make -f csg/src/csgapps/CMakeFiles/sphericalorder_manpage.dir/build.make csg/src/csgapps/CMakeFiles/sphericalorder_manpage.dir/depend +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/csgapps /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps/CMakeFiles/sphericalorder_manpage.dir/DependInfo.cmake --color= +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f csg/src/csgapps/CMakeFiles/sphericalorder_manpage.dir/build.make csg/src/csgapps/CMakeFiles/sphericalorder_manpage.dir/build +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f csg/src/csgapps/CMakeFiles/radii_manpage.dir/build.make csg/src/csgapps/CMakeFiles/radii_manpage.dir/build +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 50%] Building csg_sphericalorder manpage +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps && ../../../tools/scripts/votca_help2doc --name sphericalorder/csg_sphericalorder --format groff --out sphericalorder.man +[ 50%] Building csg_radii manpage +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps && ../../../tools/scripts/votca_help2doc --name radii/csg_radii --format groff --out radii.man +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 50%] Built target sphericalorder_manpage +make -f csg/src/csgapps/CMakeFiles/traj_force_manpage.dir/build.make csg/src/csgapps/CMakeFiles/traj_force_manpage.dir/depend +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/csgapps /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps/CMakeFiles/traj_force_manpage.dir/DependInfo.cmake --color= +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f csg/src/csgapps/CMakeFiles/traj_force_manpage.dir/build.make csg/src/csgapps/CMakeFiles/traj_force_manpage.dir/build +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 50%] Building csg_traj_force manpage +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps && ../../../tools/scripts/votca_help2doc --name traj_force/csg_traj_force --format groff --out traj_force.man +[ 50%] Built target radii_manpage +[ 50%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/dftengine/convergenceacc.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/dftengine/convergenceacc.cc.o -MF CMakeFiles/votca_xtp.dir/dftengine/convergenceacc.cc.o.d -o CMakeFiles/votca_xtp.dir/dftengine/convergenceacc.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/dftengine/convergenceacc.cc +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 50%] Built target traj_force_manpage +[ 50%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/dftengine/dftengine.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/dftengine/dftengine.cc.o -MF CMakeFiles/votca_xtp.dir/dftengine/dftengine.cc.o.d -o CMakeFiles/votca_xtp.dir/dftengine/dftengine.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/dftengine/dftengine.cc +[ 52%] Linking CXX executable unit_test_nblistgrid_3body +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_nblistgrid_3body.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_nblistgrid_3body.dir/test_nblistgrid_3body.cc.o -o unit_test_nblistgrid_3body -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools ../libcsg/libvotca_csg.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 52%] Built target unit_test_nblistgrid_3body +[ 52%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/dftengine/diis.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/dftengine/diis.cc.o -MF CMakeFiles/votca_xtp.dir/dftengine/diis.cc.o.d -o CMakeFiles/votca_xtp.dir/dftengine/diis.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/dftengine/diis.cc +[ 52%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/ecpaobasis.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/ecpaobasis.cc.o -MF CMakeFiles/votca_xtp.dir/ecpaobasis.cc.o.d -o CMakeFiles/votca_xtp.dir/ecpaobasis.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/ecpaobasis.cc +[ 52%] Linking CXX executable unit_test_pdbreader +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_pdbreader.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_pdbreader.dir/test_pdbreader.cc.o -o unit_test_pdbreader -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools ../libcsg/libvotca_csg.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a +[ 52%] Linking CXX executable template_serial +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/template && /usr/bin/cmake -E cmake_link_script CMakeFiles/template_serial.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/template_serial.dir/template_serial.cc.o -o template_serial -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools ../../src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 52%] Built target unit_test_pdbreader +[ 53%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/ecpbasisset.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/ecpbasisset.cc.o -MF CMakeFiles/votca_xtp.dir/ecpbasisset.cc.o.d -o CMakeFiles/votca_xtp.dir/ecpbasisset.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/ecpbasisset.cc +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 53%] Built target template_serial +[ 53%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/eeinteractor.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/eeinteractor.cc.o -MF CMakeFiles/votca_xtp.dir/eeinteractor.cc.o.d -o CMakeFiles/votca_xtp.dir/eeinteractor.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/eeinteractor.cc +In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/ecpaobasis.h:24, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/aopotential.h:26, + from /build/reproducible-path/votca-2022.1/xtp/src/libxtp/dftengine/dftengine.cc:32: +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 81 | loc_ = loc; + | ^~~ +In file included from /usr/include/hdf5/serial/H5Cpp.h:47, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:25: +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ +In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:31: +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 178 | attr = loc.createAttribute(name, *strType, dp); + | ^ +In file included from /usr/include/hdf5/serial/H5Cpp.h:34: /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 164 | attr = loc.openAttribute(name); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 180 | attr = loc.openAttribute(name); + | ^ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 278 | parent = loc.createGroup(name); + | ^ +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 280 | parent = loc.openGroup(name); + | ^ +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 294 | parent = loc.createGroup(name); + | ^ +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 296 | parent = loc.openGroup(name); + | ^ +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ +[ 53%] Linking CXX executable unit_test_triplelist +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_triplelist.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_triplelist.dir/test_triplelist.cc.o -o unit_test_triplelist -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools ../libcsg/libvotca_csg.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a +[ 53%] Linking CXX executable template_threaded +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/template && /usr/bin/cmake -E cmake_link_script CMakeFiles/template_threaded.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/template_threaded.dir/template_threaded.cc.o -o template_threaded -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools ../../src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 53%] Built target unit_test_bondedstatistics -[ 53%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/esp2multipole.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/esp2multipole.cc.o -MF CMakeFiles/votca_xtp.dir/esp2multipole.cc.o.d -o CMakeFiles/votca_xtp.dir/esp2multipole.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/esp2multipole.cc +[ 53%] Built target unit_test_triplelist +[ 53%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/energy_costfunction.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/energy_costfunction.cc.o -MF CMakeFiles/votca_xtp.dir/energy_costfunction.cc.o.d -o CMakeFiles/votca_xtp.dir/energy_costfunction.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/energy_costfunction.cc In file included from /build/reproducible-path/votca-2022.1/xtp/src/libxtp/ecpaobasis.cc:24: /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] @@ -6678,6 +6745,10 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 53%] Built target template_threaded +[ 53%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/esp2multipole.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/esp2multipole.cc.o -MF CMakeFiles/votca_xtp.dir/esp2multipole.cc.o.d -o CMakeFiles/votca_xtp.dir/esp2multipole.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/esp2multipole.cc [ 53%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/espfit.cc.o cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/espfit.cc.o -MF CMakeFiles/votca_xtp.dir/espfit.cc.o.d -o CMakeFiles/votca_xtp.dir/espfit.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/espfit.cc In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:31, @@ -6737,6 +6808,20 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 162 | attr = loc.createAttribute(name, *dataType, dp); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 164 | attr = loc.openAttribute(name); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::PotentialIO; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2022.1/xtp/src/libxtp/ecpaobasis.cc:152:44: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] @@ -6788,6 +6873,60 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ +[ 53%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/factories/calculatorfactory.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/factories/calculatorfactory.cc.o -MF CMakeFiles/votca_xtp.dir/factories/calculatorfactory.cc.o.d -o CMakeFiles/votca_xtp.dir/factories/calculatorfactory.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/factories/calculatorfactory.cc +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 42 | class CptTable { + | ^~~~~~~~ +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] + 42 | class CptTable { + | ^~~~~~~~ +In file included from /usr/include/hdf5/serial/H5Cpp.h:42: +/usr/include/hdf5/serial/H5CompType.h:40:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' + 40 | CompType(const CompType &original); + | ^~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] + 42 | class CptTable { + | ^~~~~~~~ +In file included from /usr/include/hdf5/serial/H5Cpp.h:26: +/usr/include/hdf5/serial/H5DcreatProp.h:137:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' + 137 | DSetCreatPropList(const DSetCreatPropList &orig); + | ^~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5DcreatProp.h:29:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] + 29 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { + | ^~~~~~~~~~~~~~~~~ +In file included from /usr/include/hdf5/serial/H5Cpp.h:25: +/usr/include/hdf5/serial/H5OcreatProp.h:53:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' + 53 | ObjCreatPropList(const ObjCreatPropList &original); + | ^~~~~~~~~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here + 42 | class CptTable { + | ^~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here + 132 | table = CptTable(name, sizeof(typename T::data), loc_); + | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 162 | attr = loc.createAttribute(name, *dataType, dp); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 164 | attr = loc.openAttribute(name); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:34, @@ -6803,63 +6942,14 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ -In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/ecpaobasis.h:24, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/aopotential.h:26, - from /build/reproducible-path/votca-2022.1/xtp/src/libxtp/dftengine/dftengine.cc:32: -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 81 | loc_ = loc; - | ^~~ -In file included from /usr/include/hdf5/serial/H5Cpp.h:47, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:25: -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ -In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:31: -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 178 | attr = loc.createAttribute(name, *strType, dp); - | ^ -In file included from /usr/include/hdf5/serial/H5Cpp.h:34: -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 180 | attr = loc.openAttribute(name); - | ^ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 278 | parent = loc.createGroup(name); - | ^ -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 280 | parent = loc.openGroup(name); - | ^ -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 294 | parent = loc.createGroup(name); - | ^ -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 296 | parent = loc.openGroup(name); - | ^ -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ -[ 53%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/factories/calculatorfactory.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/factories/calculatorfactory.cc.o -MF CMakeFiles/votca_xtp.dir/factories/calculatorfactory.cc.o.d -o CMakeFiles/votca_xtp.dir/factories/calculatorfactory.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/factories/calculatorfactory.cc +[ 53%] Linking CXX executable csg_boltzmann +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csg_boltzmann && /usr/bin/cmake -E cmake_link_script CMakeFiles/csg_boltzmann.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/csg_boltzmann.dir/main.cc.o CMakeFiles/votca_csg_boltzmann.dir/bondedstatistics.cc.o CMakeFiles/votca_csg_boltzmann.dir/stdanalysis.cc.o CMakeFiles/votca_csg_boltzmann.dir/tabulatedpotential.cc.o -o csg_boltzmann -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools: ../libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a +[ 53%] Linking CXX executable unit_test_tabulatedpotential +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_tabulatedpotential.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_tabulatedpotential.dir/test_tabulatedpotential.cc.o ../csg_boltzmann/CMakeFiles/votca_csg_boltzmann.dir/bondedstatistics.cc.o ../csg_boltzmann/CMakeFiles/votca_csg_boltzmann.dir/stdanalysis.cc.o ../csg_boltzmann/CMakeFiles/votca_csg_boltzmann.dir/tabulatedpotential.cc.o -o unit_test_tabulatedpotential -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools ../libcsg/libvotca_csg.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a +[ 53%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/factories/filterfactory.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/factories/filterfactory.cc.o -MF CMakeFiles/votca_xtp.dir/factories/filterfactory.cc.o.d -o CMakeFiles/votca_xtp.dir/factories/filterfactory.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/factories/filterfactory.cc In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] @@ -6901,10 +6991,26 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ -[ 53%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/factories/filterfactory.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/factories/filterfactory.cc.o -MF CMakeFiles/votca_xtp.dir/factories/filterfactory.cc.o.d -o CMakeFiles/votca_xtp.dir/factories/filterfactory.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/factories/filterfactory.cc +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 53%] Built target csg_boltzmann [ 53%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/factories/jobcalculatorfactory.cc.o cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/factories/jobcalculatorfactory.cc.o -MF CMakeFiles/votca_xtp.dir/factories/jobcalculatorfactory.cc.o.d -o CMakeFiles/votca_xtp.dir/factories/jobcalculatorfactory.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/factories/jobcalculatorfactory.cc +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 53%] Built target unit_test_tabulatedpotential +make -f csg/src/csg_boltzmann/CMakeFiles/csg_boltzmann_manpage.dir/build.make csg/src/csg_boltzmann/CMakeFiles/csg_boltzmann_manpage.dir/depend +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/csg_boltzmann /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csg_boltzmann /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csg_boltzmann/CMakeFiles/csg_boltzmann_manpage.dir/DependInfo.cmake --color= +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f csg/src/csg_boltzmann/CMakeFiles/csg_boltzmann_manpage.dir/build.make csg/src/csg_boltzmann/CMakeFiles/csg_boltzmann_manpage.dir/build +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 53%] Building csg_boltzmann manpage +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csg_boltzmann && ../../../tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csg_boltzmann/csg_boltzmann --format groff --out csg_boltzmann.man +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 53%] Built target csg_boltzmann_manpage +[ 54%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/factories/qmpackagefactory.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/factories/qmpackagefactory.cc.o -MF CMakeFiles/votca_xtp.dir/factories/qmpackagefactory.cc.o.d -o CMakeFiles/votca_xtp.dir/factories/qmpackagefactory.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/factories/qmpackagefactory.cc +[ 54%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/factories/quadrature_factory.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/factories/quadrature_factory.cc.o -MF CMakeFiles/votca_xtp.dir/factories/quadrature_factory.cc.o.d -o CMakeFiles/votca_xtp.dir/factories/quadrature_factory.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/factories/quadrature_factory.cc /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] @@ -6919,8 +7025,6 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ -[ 54%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/factories/qmpackagefactory.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/factories/qmpackagefactory.cc.o -MF CMakeFiles/votca_xtp.dir/factories/qmpackagefactory.cc.o.d -o CMakeFiles/votca_xtp.dir/factories/qmpackagefactory.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/factories/qmpackagefactory.cc In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:34, @@ -6978,22 +7082,6 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 162 | attr = loc.createAttribute(name, *dataType, dp); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 164 | attr = loc.openAttribute(name); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -[ 54%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/factories/quadrature_factory.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/factories/quadrature_factory.cc.o -MF CMakeFiles/votca_xtp.dir/factories/quadrature_factory.cc.o.d -o CMakeFiles/votca_xtp.dir/factories/quadrature_factory.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/factories/quadrature_factory.cc In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:34, @@ -7050,20 +7138,6 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 162 | attr = loc.createAttribute(name, *dataType, dp); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 164 | attr = loc.openAttribute(name); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:34, @@ -7179,8 +7253,6 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ -[ 54%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/factories/sigmafactory.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/factories/sigmafactory.cc.o -MF CMakeFiles/votca_xtp.dir/factories/sigmafactory.cc.o.d -o CMakeFiles/votca_xtp.dir/factories/sigmafactory.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/factories/sigmafactory.cc /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] @@ -7195,46 +7267,8 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 42 | class CptTable { - | ^~~~~~~~ -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] - 42 | class CptTable { - | ^~~~~~~~ -In file included from /usr/include/hdf5/serial/H5Cpp.h:42: -/usr/include/hdf5/serial/H5CompType.h:40:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' - 40 | CompType(const CompType &original); - | ^~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] - 42 | class CptTable { - | ^~~~~~~~ -In file included from /usr/include/hdf5/serial/H5Cpp.h:26: -/usr/include/hdf5/serial/H5DcreatProp.h:137:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' - 137 | DSetCreatPropList(const DSetCreatPropList &orig); - | ^~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5DcreatProp.h:29:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] - 29 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { - | ^~~~~~~~~~~~~~~~~ -In file included from /usr/include/hdf5/serial/H5Cpp.h:25: -/usr/include/hdf5/serial/H5OcreatProp.h:53:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' - 53 | ObjCreatPropList(const ObjCreatPropList &original); - | ^~~~~~~~~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here - 42 | class CptTable { - | ^~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here - 132 | table = CptTable(name, sizeof(typename T::data), loc_); - | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -7305,21 +7339,58 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ -In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/orbitals.h:31, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/statefilter_base.h:33, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/filterfactory.h:28, - from /build/reproducible-path/votca-2022.1/xtp/src/libxtp/factories/filterfactory.cc:22: -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 81 | loc_ = loc; - | ^~~ -In file included from /usr/include/hdf5/serial/H5Cpp.h:47, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:25: +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 42 | class CptTable { + | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] + 42 | class CptTable { + | ^~~~~~~~ +In file included from /usr/include/hdf5/serial/H5Cpp.h:42: +/usr/include/hdf5/serial/H5CompType.h:40:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' + 40 | CompType(const CompType &original); + | ^~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] + 42 | class CptTable { + | ^~~~~~~~ +In file included from /usr/include/hdf5/serial/H5Cpp.h:26: +/usr/include/hdf5/serial/H5DcreatProp.h:137:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' + 137 | DSetCreatPropList(const DSetCreatPropList &orig); + | ^~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5DcreatProp.h:29:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] + 29 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { + | ^~~~~~~~~~~~~~~~~ +In file included from /usr/include/hdf5/serial/H5Cpp.h:25: +/usr/include/hdf5/serial/H5OcreatProp.h:53:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' + 53 | ObjCreatPropList(const ObjCreatPropList &original); + | ^~~~~~~~~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here + 42 | class CptTable { + | ^~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here + 132 | table = CptTable(name, sizeof(typename T::data), loc_); + | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 162 | attr = loc.createAttribute(name, *dataType, dp); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 164 | attr = loc.openAttribute(name); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::StaticSite; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::StaticSite]' /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here @@ -7372,6 +7443,23 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ +[ 54%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/factories/sigmafactory.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/factories/sigmafactory.cc.o -MF CMakeFiles/votca_xtp.dir/factories/sigmafactory.cc.o.d -o CMakeFiles/votca_xtp.dir/factories/sigmafactory.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/factories/sigmafactory.cc +In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/orbitals.h:31, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/statefilter_base.h:33, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/filterfactory.h:28, + from /build/reproducible-path/votca-2022.1/xtp/src/libxtp/factories/filterfactory.cc:22: +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 81 | loc_ = loc; + | ^~~ +In file included from /usr/include/hdf5/serial/H5Cpp.h:47, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:25: +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] @@ -7530,6 +7618,20 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 162 | attr = loc.createAttribute(name, *dataType, dp); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 164 | attr = loc.openAttribute(name); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here @@ -7582,6 +7684,21 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = double; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = double; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/bse_population.h:50:6: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 162 | attr = loc.createAttribute(name, *dataType, dp); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 164 | attr = loc.openAttribute(name); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] @@ -7596,9 +7713,8 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = double; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = double; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/bse_population.h:50:6: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -7663,26 +7779,9 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ -[ 54%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/factories/toolfactory.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/factories/toolfactory.cc.o -MF CMakeFiles/votca_xtp.dir/factories/toolfactory.cc.o.d -o CMakeFiles/votca_xtp.dir/factories/toolfactory.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/factories/toolfactory.cc -[ 54%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/forces.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/forces.cc.o -MF CMakeFiles/votca_xtp.dir/forces.cc.o.d -o CMakeFiles/votca_xtp.dir/forces.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/forces.cc -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 162 | attr = loc.createAttribute(name, *dataType, dp); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 164 | attr = loc.openAttribute(name); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = double; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = double; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/bse_population.h:50:6: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -7747,21 +7846,8 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = double; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = double; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/bse_population.h:50:6: required from here -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 162 | attr = loc.createAttribute(name, *dataType, dp); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 164 | attr = loc.openAttribute(name); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ +[ 54%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/factories/toolfactory.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/factories/toolfactory.cc.o -MF CMakeFiles/votca_xtp.dir/factories/toolfactory.cc.o.d -o CMakeFiles/votca_xtp.dir/factories/toolfactory.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/factories/toolfactory.cc /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here @@ -7814,8 +7900,8 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ -[ 54%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/gaussian_quadrature/gauss_hermite_quadrature.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/gaussian_quadrature/gauss_hermite_quadrature.cc.o -MF CMakeFiles/votca_xtp.dir/gaussian_quadrature/gauss_hermite_quadrature.cc.o.d -o CMakeFiles/votca_xtp.dir/gaussian_quadrature/gauss_hermite_quadrature.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/gaussian_quadrature/gauss_hermite_quadrature.cc +[ 54%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/forces.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/forces.cc.o -MF CMakeFiles/votca_xtp.dir/forces.cc.o.d -o CMakeFiles/votca_xtp.dir/forces.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/forces.cc /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here @@ -7868,8 +7954,18 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' +[ 54%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/gaussian_quadrature/gauss_hermite_quadrature.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/gaussian_quadrature/gauss_hermite_quadrature.cc.o -MF CMakeFiles/votca_xtp.dir/gaussian_quadrature/gauss_hermite_quadrature.cc.o.d -o CMakeFiles/votca_xtp.dir/gaussian_quadrature/gauss_hermite_quadrature.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/gaussian_quadrature/gauss_hermite_quadrature.cc +[ 54%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/gaussian_quadrature/gauss_laguerre_quadrature.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/gaussian_quadrature/gauss_laguerre_quadrature.cc.o -MF CMakeFiles/votca_xtp.dir/gaussian_quadrature/gauss_laguerre_quadrature.cc.o.d -o CMakeFiles/votca_xtp.dir/gaussian_quadrature/gauss_laguerre_quadrature.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/gaussian_quadrature/gauss_laguerre_quadrature.cc +[ 54%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/gaussian_quadrature/gauss_legendre_quadrature.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/gaussian_quadrature/gauss_legendre_quadrature.cc.o -MF CMakeFiles/votca_xtp.dir/gaussian_quadrature/gauss_legendre_quadrature.cc.o.d -o CMakeFiles/votca_xtp.dir/gaussian_quadrature/gauss_legendre_quadrature.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/gaussian_quadrature/gauss_legendre_quadrature.cc +[ 54%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/gaussianwriter.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/gaussianwriter.cc.o -MF CMakeFiles/votca_xtp.dir/gaussianwriter.cc.o.d -o CMakeFiles/votca_xtp.dir/gaussianwriter.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/gaussianwriter.cc +[ 56%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/geometry_optimization.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/geometry_optimization.cc.o -MF CMakeFiles/votca_xtp.dir/geometry_optimization.cc.o.d -o CMakeFiles/votca_xtp.dir/geometry_optimization.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/geometry_optimization.cc +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::StaticSite; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::StaticSite]' /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { @@ -7906,7 +8002,7 @@ | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::StaticSite]' /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); @@ -7920,16 +8016,6 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ -[ 54%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/gaussian_quadrature/gauss_laguerre_quadrature.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/gaussian_quadrature/gauss_laguerre_quadrature.cc.o -MF CMakeFiles/votca_xtp.dir/gaussian_quadrature/gauss_laguerre_quadrature.cc.o.d -o CMakeFiles/votca_xtp.dir/gaussian_quadrature/gauss_laguerre_quadrature.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/gaussian_quadrature/gauss_laguerre_quadrature.cc -[ 54%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/gaussian_quadrature/gauss_legendre_quadrature.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/gaussian_quadrature/gauss_legendre_quadrature.cc.o -MF CMakeFiles/votca_xtp.dir/gaussian_quadrature/gauss_legendre_quadrature.cc.o.d -o CMakeFiles/votca_xtp.dir/gaussian_quadrature/gauss_legendre_quadrature.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/gaussian_quadrature/gauss_legendre_quadrature.cc -[ 54%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/gaussianwriter.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/gaussianwriter.cc.o -MF CMakeFiles/votca_xtp.dir/gaussianwriter.cc.o.d -o CMakeFiles/votca_xtp.dir/gaussianwriter.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/gaussianwriter.cc -[ 56%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/geometry_optimization.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/geometry_optimization.cc.o -MF CMakeFiles/votca_xtp.dir/geometry_optimization.cc.o.d -o CMakeFiles/votca_xtp.dir/geometry_optimization.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/geometry_optimization.cc -[ 56%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/gnode.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/gnode.cc.o -MF CMakeFiles/votca_xtp.dir/gnode.cc.o.d -o CMakeFiles/votca_xtp.dir/gnode.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/gnode.cc In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:34, @@ -7986,58 +8072,6 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::StaticSite; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::StaticSite]' -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 42 | class CptTable { - | ^~~~~~~~ -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] - 42 | class CptTable { - | ^~~~~~~~ -In file included from /usr/include/hdf5/serial/H5Cpp.h:42: -/usr/include/hdf5/serial/H5CompType.h:40:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' - 40 | CompType(const CompType &original); - | ^~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] - 42 | class CptTable { - | ^~~~~~~~ -In file included from /usr/include/hdf5/serial/H5Cpp.h:26: -/usr/include/hdf5/serial/H5DcreatProp.h:137:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' - 137 | DSetCreatPropList(const DSetCreatPropList &orig); - | ^~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5DcreatProp.h:29:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] - 29 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { - | ^~~~~~~~~~~~~~~~~ -In file included from /usr/include/hdf5/serial/H5Cpp.h:25: -/usr/include/hdf5/serial/H5OcreatProp.h:53:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' - 53 | ObjCreatPropList(const ObjCreatPropList &original); - | ^~~~~~~~~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here - 42 | class CptTable { - | ^~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here - 132 | table = CptTable(name, sizeof(typename T::data), loc_); - | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::StaticSite]' -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 162 | attr = loc.createAttribute(name, *dataType, dp); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 164 | attr = loc.openAttribute(name); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/orbitals.h:31, @@ -8109,8 +8143,11 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here +[ 56%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/gnode.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/gnode.cc.o -MF CMakeFiles/votca_xtp.dir/gnode.cc.o.d -o CMakeFiles/votca_xtp.dir/gnode.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/gnode.cc +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = double; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = double; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/bse_population.h:50:6: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -8123,9 +8160,10 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = double; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = double; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/bse_population.h:50:6: required from here +[ 56%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/grids/grid.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/grids/grid.cc.o -MF CMakeFiles/votca_xtp.dir/grids/grid.cc.o.d -o CMakeFiles/votca_xtp.dir/grids/grid.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/grids/grid.cc +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -8138,14 +8176,12 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ -[ 56%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/grids/grid.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/grids/grid.cc.o -MF CMakeFiles/votca_xtp.dir/grids/grid.cc.o.d -o CMakeFiles/votca_xtp.dir/grids/grid.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/grids/grid.cc [ 56%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/grids/gridbox.cc.o cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/grids/gridbox.cc.o -MF CMakeFiles/votca_xtp.dir/grids/gridbox.cc.o.d -o CMakeFiles/votca_xtp.dir/grids/gridbox.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/grids/gridbox.cc [ 56%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/grids/radial_euler_maclaurin_rule.cc.o cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/grids/radial_euler_maclaurin_rule.cc.o -MF CMakeFiles/votca_xtp.dir/grids/radial_euler_maclaurin_rule.cc.o.d -o CMakeFiles/votca_xtp.dir/grids/radial_euler_maclaurin_rule.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/grids/radial_euler_maclaurin_rule.cc -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::PolarSite; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::PolarSite]' /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { @@ -8182,7 +8218,7 @@ | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::PolarSite]' /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); @@ -8196,63 +8232,8 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ -In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:34, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/segment.h:30, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/qmpair.h:32, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/gnode.h:25, - from /build/reproducible-path/votca-2022.1/xtp/src/libxtp/gnode.cc:22: -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 81 | loc_ = loc; - | ^~~ -In file included from /usr/include/hdf5/serial/H5Cpp.h:47, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:25: -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ -In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:31: -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 178 | attr = loc.createAttribute(name, *strType, dp); - | ^ -In file included from /usr/include/hdf5/serial/H5Cpp.h:34: -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 180 | attr = loc.openAttribute(name); - | ^ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 278 | parent = loc.createGroup(name); - | ^ -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 280 | parent = loc.openGroup(name); - | ^ -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 294 | parent = loc.createGroup(name); - | ^ -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 296 | parent = loc.openGroup(name); - | ^ -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ +[ 56%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/grids/regular_grid.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/grids/regular_grid.cc.o -MF CMakeFiles/votca_xtp.dir/grids/regular_grid.cc.o.d -o CMakeFiles/votca_xtp.dir/grids/regular_grid.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/grids/regular_grid.cc In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:34, @@ -8310,24 +8291,8 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 162 | attr = loc.createAttribute(name, *dataType, dp); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 164 | attr = loc.openAttribute(name); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -[ 56%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/grids/regular_grid.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/grids/regular_grid.cc.o -MF CMakeFiles/votca_xtp.dir/grids/regular_grid.cc.o.d -o CMakeFiles/votca_xtp.dir/grids/regular_grid.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/grids/regular_grid.cc -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::PolarSite; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::PolarSite]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { @@ -8364,7 +8329,7 @@ | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::PolarSite]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); @@ -8378,48 +8343,67 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::Atom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::Atom]' -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 42 | class CptTable { - | ^~~~~~~~ +[ 56%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/grids/sphere_lebedev_rule.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/grids/sphere_lebedev_rule.cc.o -MF CMakeFiles/votca_xtp.dir/grids/sphere_lebedev_rule.cc.o.d -o CMakeFiles/votca_xtp.dir/grids/sphere_lebedev_rule.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/grids/sphere_lebedev_rule.cc +[ 56%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/grids/vxc_grid.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/grids/vxc_grid.cc.o -MF CMakeFiles/votca_xtp.dir/grids/vxc_grid.cc.o.d -o CMakeFiles/votca_xtp.dir/grids/vxc_grid.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/grids/vxc_grid.cc +In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/orbitals.h:31, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/gaussianwriter.h:26, + from /build/reproducible-path/votca-2022.1/xtp/src/libxtp/gaussianwriter.cc:20: +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 81 | loc_ = loc; + | ^~~ +In file included from /usr/include/hdf5/serial/H5Cpp.h:47, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] - 42 | class CptTable { - | ^~~~~~~~ -In file included from /usr/include/hdf5/serial/H5Cpp.h:42: -/usr/include/hdf5/serial/H5CompType.h:40:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' - 40 | CompType(const CompType &original); - | ^~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] - 42 | class CptTable { - | ^~~~~~~~ -In file included from /usr/include/hdf5/serial/H5Cpp.h:26: -/usr/include/hdf5/serial/H5DcreatProp.h:137:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' - 137 | DSetCreatPropList(const DSetCreatPropList &orig); - | ^~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5DcreatProp.h:29:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] - 29 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { - | ^~~~~~~~~~~~~~~~~ -In file included from /usr/include/hdf5/serial/H5Cpp.h:25: -/usr/include/hdf5/serial/H5OcreatProp.h:53:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' - 53 | ObjCreatPropList(const ObjCreatPropList &original); - | ^~~~~~~~~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here - 42 | class CptTable { - | ^~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here - 132 | table = CptTable(name, sizeof(typename T::data), loc_); - | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -[ 56%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/grids/sphere_lebedev_rule.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/grids/sphere_lebedev_rule.cc.o -MF CMakeFiles/votca_xtp.dir/grids/sphere_lebedev_rule.cc.o.d -o CMakeFiles/votca_xtp.dir/grids/sphere_lebedev_rule.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/grids/sphere_lebedev_rule.cc -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::Atom]' -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here +In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:31: +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 178 | attr = loc.createAttribute(name, *strType, dp); + | ^ +In file included from /usr/include/hdf5/serial/H5Cpp.h:34: +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 180 | attr = loc.openAttribute(name); + | ^ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 278 | parent = loc.createGroup(name); + | ^ +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 280 | parent = loc.openGroup(name); + | ^ +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 294 | parent = loc.createGroup(name); + | ^ +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 296 | parent = loc.openGroup(name); + | ^ +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -8432,13 +8416,13 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ -[ 56%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/grids/vxc_grid.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/grids/vxc_grid.cc.o -MF CMakeFiles/votca_xtp.dir/grids/vxc_grid.cc.o.d -o CMakeFiles/votca_xtp.dir/grids/vxc_grid.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/grids/vxc_grid.cc In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/orbitals.h:31, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/gaussianwriter.h:26, - from /build/reproducible-path/votca-2022.1/xtp/src/libxtp/gaussianwriter.cc:20: + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:34, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/segment.h:30, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/qmpair.h:32, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/gnode.h:25, + from /build/reproducible-path/votca-2022.1/xtp/src/libxtp/gnode.cc:22: /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; @@ -8517,6 +8501,58 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::Atom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::Atom]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 42 | class CptTable { + | ^~~~~~~~ +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] + 42 | class CptTable { + | ^~~~~~~~ +In file included from /usr/include/hdf5/serial/H5Cpp.h:42: +/usr/include/hdf5/serial/H5CompType.h:40:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' + 40 | CompType(const CompType &original); + | ^~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] + 42 | class CptTable { + | ^~~~~~~~ +In file included from /usr/include/hdf5/serial/H5Cpp.h:26: +/usr/include/hdf5/serial/H5DcreatProp.h:137:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' + 137 | DSetCreatPropList(const DSetCreatPropList &orig); + | ^~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5DcreatProp.h:29:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] + 29 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { + | ^~~~~~~~~~~~~~~~~ +In file included from /usr/include/hdf5/serial/H5Cpp.h:25: +/usr/include/hdf5/serial/H5OcreatProp.h:53:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' + 53 | ObjCreatPropList(const ObjCreatPropList &original); + | ^~~~~~~~~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here + 42 | class CptTable { + | ^~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here + 132 | table = CptTable(name, sizeof(typename T::data), loc_); + | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::Atom]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 162 | attr = loc.createAttribute(name, *dataType, dp); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 164 | attr = loc.openAttribute(name); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:34, @@ -8573,6 +8609,20 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 162 | attr = loc.createAttribute(name, *dataType, dp); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 164 | attr = loc.openAttribute(name); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here @@ -8625,20 +8675,6 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 162 | attr = loc.createAttribute(name, *dataType, dp); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 164 | attr = loc.openAttribute(name); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here @@ -8691,6 +8727,8 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ +[ 57%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/gwbse/bse.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/gwbse/bse.cc.o -MF CMakeFiles/votca_xtp.dir/gwbse/bse.cc.o.d -o CMakeFiles/votca_xtp.dir/gwbse/bse.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/gwbse/bse.cc /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here @@ -8747,7 +8785,7 @@ from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:34, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/qmmolecule.h:25, - from /build/reproducible-path/votca-2022.1/xtp/src/libxtp/grids/radial_euler_maclaurin_rule.cc:26: + from /build/reproducible-path/votca-2022.1/xtp/src/libxtp/grids/regular_grid.cc:22: /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; @@ -8798,28 +8836,15 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 162 | attr = loc.createAttribute(name, *dataType, dp); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 164 | attr = loc.openAttribute(name); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -[ 57%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/gwbse/bse.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/gwbse/bse.cc.o -MF CMakeFiles/votca_xtp.dir/gwbse/bse.cc.o.d -o CMakeFiles/votca_xtp.dir/gwbse/bse.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/gwbse/bse.cc +[ 57%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/gwbse/bse_operator.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/gwbse/bse_operator.cc.o -MF CMakeFiles/votca_xtp.dir/gwbse/bse_operator.cc.o.d -o CMakeFiles/votca_xtp.dir/gwbse/bse_operator.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/gwbse/bse_operator.cc +[ 57%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/gwbse/gw.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/gwbse/gw.cc.o -MF CMakeFiles/votca_xtp.dir/gwbse/gw.cc.o.d -o CMakeFiles/votca_xtp.dir/gwbse/gw.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/gwbse/gw.cc In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:34, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/qmmolecule.h:25, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/sphere_lebedev_rule.h:32, - from /build/reproducible-path/votca-2022.1/xtp/src/libxtp/grids/sphere_lebedev_rule.cc:21: + from /build/reproducible-path/votca-2022.1/xtp/src/libxtp/grids/radial_euler_maclaurin_rule.cc:26: /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; @@ -8870,65 +8895,12 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 42 | class CptTable { - | ^~~~~~~~ -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] - 42 | class CptTable { - | ^~~~~~~~ -In file included from /usr/include/hdf5/serial/H5Cpp.h:42: -/usr/include/hdf5/serial/H5CompType.h:40:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' - 40 | CompType(const CompType &original); - | ^~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] - 42 | class CptTable { - | ^~~~~~~~ -In file included from /usr/include/hdf5/serial/H5Cpp.h:26: -/usr/include/hdf5/serial/H5DcreatProp.h:137:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' - 137 | DSetCreatPropList(const DSetCreatPropList &orig); - | ^~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5DcreatProp.h:29:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] - 29 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { - | ^~~~~~~~~~~~~~~~~ -In file included from /usr/include/hdf5/serial/H5Cpp.h:25: -/usr/include/hdf5/serial/H5OcreatProp.h:53:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' - 53 | ObjCreatPropList(const ObjCreatPropList &original); - | ^~~~~~~~~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here - 42 | class CptTable { - | ^~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here - 132 | table = CptTable(name, sizeof(typename T::data), loc_); - | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 162 | attr = loc.createAttribute(name, *dataType, dp); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 164 | attr = loc.openAttribute(name); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -[ 57%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/gwbse/bse_operator.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/gwbse/bse_operator.cc.o -MF CMakeFiles/votca_xtp.dir/gwbse/bse_operator.cc.o.d -o CMakeFiles/votca_xtp.dir/gwbse/bse_operator.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/gwbse/bse_operator.cc In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:34, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/qmmolecule.h:25, - from /build/reproducible-path/votca-2022.1/xtp/src/libxtp/grids/regular_grid.cc:22: + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/sphere_lebedev_rule.h:32, + from /build/reproducible-path/votca-2022.1/xtp/src/libxtp/grids/sphere_lebedev_rule.cc:21: /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; @@ -8979,22 +8951,6 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ -[ 57%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/gwbse/gw.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/gwbse/gw.cc.o -MF CMakeFiles/votca_xtp.dir/gwbse/gw.cc.o.d -o CMakeFiles/votca_xtp.dir/gwbse/gw.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/gwbse/gw.cc -In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:34, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/qmmolecule.h:25, - from /build/reproducible-path/votca-2022.1/xtp/src/libxtp/grids/vxc_grid.cc:23: -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 81 | loc_ = loc; - | ^~~ -In file included from /usr/include/hdf5/serial/H5Cpp.h:47, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:25: -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] @@ -9009,6 +8965,20 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ +In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:34, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/qmmolecule.h:25, + from /build/reproducible-path/votca-2022.1/xtp/src/libxtp/grids/vxc_grid.cc:23: +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 81 | loc_ = loc; + | ^~~ +In file included from /usr/include/hdf5/serial/H5Cpp.h:47, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:25: +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] @@ -9064,12 +9034,6 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ -[ 57%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/gwbse/gwbse.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/gwbse/gwbse.cc.o -MF CMakeFiles/votca_xtp.dir/gwbse/gwbse.cc.o.d -o CMakeFiles/votca_xtp.dir/gwbse/gwbse.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/gwbse/gwbse.cc -[ 57%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/gwbse/gwbseengine.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/gwbse/gwbseengine.cc.o -MF CMakeFiles/votca_xtp.dir/gwbse/gwbseengine.cc.o.d -o CMakeFiles/votca_xtp.dir/gwbse/gwbseengine.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/gwbse/gwbseengine.cc -[ 57%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/gwbse/ppm.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/gwbse/ppm.cc.o -MF CMakeFiles/votca_xtp.dir/gwbse/ppm.cc.o.d -o CMakeFiles/votca_xtp.dir/gwbse/ppm.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/gwbse/ppm.cc /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here @@ -9122,20 +9086,6 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 162 | attr = loc.createAttribute(name, *dataType, dp); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 164 | attr = loc.openAttribute(name); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here @@ -9152,6 +9102,7 @@ /usr/include/hdf5/serial/H5CompType.h:40:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 40 | CompType(const CompType &original); | ^~~~~~~~ +[ 57%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/gwbse/gwbse.cc.o /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ @@ -9188,8 +9139,25 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ -[ 57%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/gwbse/rpa.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/gwbse/rpa.cc.o -MF CMakeFiles/votca_xtp.dir/gwbse/rpa.cc.o.d -o CMakeFiles/votca_xtp.dir/gwbse/rpa.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/gwbse/rpa.cc +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/gwbse/gwbse.cc.o -MF CMakeFiles/votca_xtp.dir/gwbse/gwbse.cc.o.d -o CMakeFiles/votca_xtp.dir/gwbse/gwbse.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/gwbse/gwbse.cc +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 162 | attr = loc.createAttribute(name, *dataType, dp); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 164 | attr = loc.openAttribute(name); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +[ 57%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/gwbse/gwbseengine.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/gwbse/gwbseengine.cc.o -MF CMakeFiles/votca_xtp.dir/gwbse/gwbseengine.cc.o.d -o CMakeFiles/votca_xtp.dir/gwbse/gwbseengine.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/gwbse/gwbseengine.cc +[ 57%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/gwbse/ppm.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/gwbse/ppm.cc.o -MF CMakeFiles/votca_xtp.dir/gwbse/ppm.cc.o.d -o CMakeFiles/votca_xtp.dir/gwbse/ppm.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/gwbse/ppm.cc /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here @@ -9242,6 +9210,22 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 162 | attr = loc.createAttribute(name, *dataType, dp); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 164 | attr = loc.openAttribute(name); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +[ 57%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/gwbse/rpa.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/gwbse/rpa.cc.o -MF CMakeFiles/votca_xtp.dir/gwbse/rpa.cc.o.d -o CMakeFiles/votca_xtp.dir/gwbse/rpa.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/gwbse/rpa.cc [ 57%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/gwbse/sigma_base.cc.o cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/gwbse/sigma_base.cc.o -MF CMakeFiles/votca_xtp.dir/gwbse/sigma_base.cc.o.d -o CMakeFiles/votca_xtp.dir/gwbse/sigma_base.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/gwbse/sigma_base.cc [ 58%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/gyration.cc.o @@ -9301,10 +9285,46 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ -[ 58%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/job.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/job.cc.o -MF CMakeFiles/votca_xtp.dir/job.cc.o.d -o CMakeFiles/votca_xtp.dir/job.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/job.cc -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 42 | class CptTable { + | ^~~~~~~~ +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] + 42 | class CptTable { + | ^~~~~~~~ +In file included from /usr/include/hdf5/serial/H5Cpp.h:42: +/usr/include/hdf5/serial/H5CompType.h:40:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' + 40 | CompType(const CompType &original); + | ^~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] + 42 | class CptTable { + | ^~~~~~~~ +In file included from /usr/include/hdf5/serial/H5Cpp.h:26: +/usr/include/hdf5/serial/H5DcreatProp.h:137:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' + 137 | DSetCreatPropList(const DSetCreatPropList &orig); + | ^~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5DcreatProp.h:29:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] + 29 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { + | ^~~~~~~~~~~~~~~~~ +In file included from /usr/include/hdf5/serial/H5Cpp.h:25: +/usr/include/hdf5/serial/H5OcreatProp.h:53:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' + 53 | ObjCreatPropList(const ObjCreatPropList &original); + | ^~~~~~~~~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here + 42 | class CptTable { + | ^~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here + 132 | table = CptTable(name, sizeof(typename T::data), loc_); + | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -9317,11 +9337,8 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ -[ 58%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/jobcalculators/eqm.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/jobcalculators/eqm.cc.o -MF CMakeFiles/votca_xtp.dir/jobcalculators/eqm.cc.o.d -o CMakeFiles/votca_xtp.dir/jobcalculators/eqm.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/jobcalculators/eqm.cc -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = double; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = double; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/bse_population.h:50:6: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -9334,8 +9351,6 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ -[ 58%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/jobcalculators/iexcitoncl.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/jobcalculators/iexcitoncl.cc.o -MF CMakeFiles/votca_xtp.dir/jobcalculators/iexcitoncl.cc.o.d -o CMakeFiles/votca_xtp.dir/jobcalculators/iexcitoncl.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/jobcalculators/iexcitoncl.cc In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/orbitals.h:31, @@ -9350,6 +9365,8 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ +[ 58%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/job.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/job.cc.o -MF CMakeFiles/votca_xtp.dir/job.cc.o.d -o CMakeFiles/votca_xtp.dir/job.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/job.cc In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] @@ -9391,6 +9408,21 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = double; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = double; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/bse_population.h:50:6: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 162 | attr = loc.createAttribute(name, *dataType, dp); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 164 | attr = loc.openAttribute(name); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] @@ -9405,6 +9437,8 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ +[ 58%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/jobcalculators/eqm.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/jobcalculators/eqm.cc.o -MF CMakeFiles/votca_xtp.dir/jobcalculators/eqm.cc.o.d -o CMakeFiles/votca_xtp.dir/jobcalculators/eqm.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/jobcalculators/eqm.cc In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/orbitals.h:31, @@ -9420,6 +9454,20 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ +In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/orbitals.h:31, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/bse.h:26, + from /build/reproducible-path/votca-2022.1/xtp/src/libxtp/gwbse/gwbse.cc:33: +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 81 | loc_ = loc; + | ^~~ +In file included from /usr/include/hdf5/serial/H5Cpp.h:47, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:25: +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] @@ -9461,20 +9509,6 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ -In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/orbitals.h:31, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/bse.h:26, - from /build/reproducible-path/votca-2022.1/xtp/src/libxtp/gwbse/gwbse.cc:33: -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 81 | loc_ = loc; - | ^~~ -In file included from /usr/include/hdf5/serial/H5Cpp.h:47, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:25: -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] @@ -9490,8 +9524,6 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ -[ 58%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/jobcalculators/iqm.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/jobcalculators/iqm.cc.o -MF CMakeFiles/votca_xtp.dir/jobcalculators/iqm.cc.o.d -o CMakeFiles/votca_xtp.dir/jobcalculators/iqm.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/jobcalculators/iqm.cc /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); @@ -9518,6 +9550,8 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ +[ 58%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/jobcalculators/iexcitoncl.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/jobcalculators/iexcitoncl.cc.o -MF CMakeFiles/votca_xtp.dir/jobcalculators/iexcitoncl.cc.o.d -o CMakeFiles/votca_xtp.dir/jobcalculators/iexcitoncl.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/jobcalculators/iexcitoncl.cc /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] @@ -9532,54 +9566,6 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ -[ 58%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/jobcalculators/qmmm.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/jobcalculators/qmmm.cc.o -MF CMakeFiles/votca_xtp.dir/jobcalculators/qmmm.cc.o.d -o CMakeFiles/votca_xtp.dir/jobcalculators/qmmm.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/jobcalculators/qmmm.cc -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = double; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = double; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/bse_population.h:50:6: required from here -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 162 | attr = loc.createAttribute(name, *dataType, dp); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 164 | attr = loc.openAttribute(name); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -[ 58%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/jobtopology.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/jobtopology.cc.o -MF CMakeFiles/votca_xtp.dir/jobtopology.cc.o.d -o CMakeFiles/votca_xtp.dir/jobtopology.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/jobtopology.cc -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 162 | attr = loc.createAttribute(name, *dataType, dp); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 164 | attr = loc.openAttribute(name); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = double; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = double; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/bse_population.h:50:6: required from here -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 162 | attr = loc.createAttribute(name, *dataType, dp); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 164 | attr = loc.openAttribute(name); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/orbitals.h:31, @@ -9635,23 +9621,66 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ -In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:34, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/classicalsegment.h:25, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/esp2multipole.h:34, - from /build/reproducible-path/votca-2022.1/xtp/src/libxtp/jobcalculators/eqm.cc:26: -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 81 | loc_ = loc; - | ^~~ -In file included from /usr/include/hdf5/serial/H5Cpp.h:47, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:25: -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ -[ 58%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/kmccalculator.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/kmccalculator.cc.o -MF CMakeFiles/votca_xtp.dir/kmccalculator.cc.o.d -o CMakeFiles/votca_xtp.dir/kmccalculator.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/kmccalculator.cc +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = double; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = double; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/bse_population.h:50:6: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 162 | attr = loc.createAttribute(name, *dataType, dp); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 164 | attr = loc.openAttribute(name); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 162 | attr = loc.createAttribute(name, *dataType, dp); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 164 | attr = loc.openAttribute(name); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = double; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = double; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/bse_population.h:50:6: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 162 | attr = loc.createAttribute(name, *dataType, dp); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 164 | attr = loc.openAttribute(name); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +[ 58%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/jobcalculators/iqm.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/jobcalculators/iqm.cc.o -MF CMakeFiles/votca_xtp.dir/jobcalculators/iqm.cc.o.d -o CMakeFiles/votca_xtp.dir/jobcalculators/iqm.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/jobcalculators/iqm.cc +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 162 | attr = loc.createAttribute(name, *dataType, dp); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 164 | attr = loc.openAttribute(name); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here @@ -9704,12 +9733,16 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ +[ 58%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/jobcalculators/qmmm.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/jobcalculators/qmmm.cc.o -MF CMakeFiles/votca_xtp.dir/jobcalculators/qmmm.cc.o.d -o CMakeFiles/votca_xtp.dir/jobcalculators/qmmm.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/jobcalculators/qmmm.cc +[ 58%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/jobtopology.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/jobtopology.cc.o -MF CMakeFiles/votca_xtp.dir/jobtopology.cc.o.d -o CMakeFiles/votca_xtp.dir/jobtopology.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/jobtopology.cc In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:34, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/classicalsegment.h:25, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/eeinteractor.h:25, - from /build/reproducible-path/votca-2022.1/xtp/src/libxtp/jobcalculators/iexcitoncl.cc:29: + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/esp2multipole.h:34, + from /build/reproducible-path/votca-2022.1/xtp/src/libxtp/jobcalculators/eqm.cc:26: /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; @@ -9719,47 +9752,58 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ -In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:31: -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 178 | attr = loc.createAttribute(name, *strType, dp); - | ^ -In file included from /usr/include/hdf5/serial/H5Cpp.h:34: +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 42 | class CptTable { + | ^~~~~~~~ +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] + 42 | class CptTable { + | ^~~~~~~~ +In file included from /usr/include/hdf5/serial/H5Cpp.h:42: +/usr/include/hdf5/serial/H5CompType.h:40:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' + 40 | CompType(const CompType &original); + | ^~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] + 42 | class CptTable { + | ^~~~~~~~ +In file included from /usr/include/hdf5/serial/H5Cpp.h:26: +/usr/include/hdf5/serial/H5DcreatProp.h:137:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' + 137 | DSetCreatPropList(const DSetCreatPropList &orig); + | ^~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5DcreatProp.h:29:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] + 29 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { + | ^~~~~~~~~~~~~~~~~ +In file included from /usr/include/hdf5/serial/H5Cpp.h:25: +/usr/include/hdf5/serial/H5OcreatProp.h:53:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' + 53 | ObjCreatPropList(const ObjCreatPropList &original); + | ^~~~~~~~~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here + 42 | class CptTable { + | ^~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here + 132 | table = CptTable(name, sizeof(typename T::data), loc_); + | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 162 | attr = loc.createAttribute(name, *dataType, dp); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 180 | attr = loc.openAttribute(name); - | ^ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 164 | attr = loc.openAttribute(name); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 278 | parent = loc.createGroup(name); - | ^ -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 280 | parent = loc.openGroup(name); - | ^ -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 294 | parent = loc.createGroup(name); - | ^ -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 296 | parent = loc.openGroup(name); - | ^ -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] @@ -9801,46 +9845,6 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 162 | attr = loc.createAttribute(name, *dataType, dp); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 164 | attr = loc.openAttribute(name); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 162 | attr = loc.createAttribute(name, *dataType, dp); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 164 | attr = loc.openAttribute(name); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, - from /build/reproducible-path/votca-2022.1/xtp/src/libxtp/jobtopology.cc:28: -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 81 | loc_ = loc; - | ^~~ -In file included from /usr/include/hdf5/serial/H5Cpp.h:47, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:25: -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here @@ -9893,20 +9897,21 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 162 | attr = loc.createAttribute(name, *dataType, dp); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 164 | attr = loc.openAttribute(name); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ +In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:34, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/classicalsegment.h:25, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/eeinteractor.h:25, + from /build/reproducible-path/votca-2022.1/xtp/src/libxtp/jobcalculators/iexcitoncl.cc:29: +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 81 | loc_ = loc; + | ^~~ +In file included from /usr/include/hdf5/serial/H5Cpp.h:47, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:25: +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here @@ -9943,6 +9948,8 @@ /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +[ 58%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/kmccalculator.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/kmccalculator.cc.o -MF CMakeFiles/votca_xtp.dir/kmccalculator.cc.o.d -o CMakeFiles/votca_xtp.dir/kmccalculator.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/kmccalculator.cc /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' @@ -10000,21 +10007,6 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = double; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = double; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/bse_population.h:50:6: required from here -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 162 | attr = loc.createAttribute(name, *dataType, dp); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 164 | attr = loc.openAttribute(name); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here @@ -10067,13 +10059,13 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ +[ 60%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/libint2_calls.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/libint2_calls.cc.o -MF CMakeFiles/votca_xtp.dir/libint2_calls.cc.o.d -o CMakeFiles/votca_xtp.dir/libint2_calls.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/libint2_calls.cc +[ 60%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/matrixfreeoperator.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/matrixfreeoperator.cc.o -MF CMakeFiles/votca_xtp.dir/matrixfreeoperator.cc.o.d -o CMakeFiles/votca_xtp.dir/matrixfreeoperator.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/matrixfreeoperator.cc In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:34, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/segment.h:30, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/qmpair.h:32, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/gnode.h:25, - from /build/reproducible-path/votca-2022.1/xtp/src/libxtp/kmccalculator.cc:28: + from /build/reproducible-path/votca-2022.1/xtp/src/libxtp/jobtopology.cc:28: /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; @@ -10083,8 +10075,48 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ -[ 60%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/libint2_calls.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/libint2_calls.cc.o -MF CMakeFiles/votca_xtp.dir/libint2_calls.cc.o.d -o CMakeFiles/votca_xtp.dir/libint2_calls.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/libint2_calls.cc +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 162 | attr = loc.createAttribute(name, *dataType, dp); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 164 | attr = loc.openAttribute(name); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/region.h:30, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/jobtopology.h:27, + from /build/reproducible-path/votca-2022.1/xtp/src/libxtp/jobcalculators/qmmm.cc:34: +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 81 | loc_ = loc; + | ^~~ +In file included from /usr/include/hdf5/serial/H5Cpp.h:47, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:25: +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 162 | attr = loc.createAttribute(name, *dataType, dp); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 164 | attr = loc.openAttribute(name); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] @@ -10126,76 +10158,50 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ -In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/region.h:30, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/jobtopology.h:27, - from /build/reproducible-path/votca-2022.1/xtp/src/libxtp/jobcalculators/qmmm.cc:34: -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 81 | loc_ = loc; - | ^~~ -In file included from /usr/include/hdf5/serial/H5Cpp.h:47, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:25: -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 42 | class CptTable { - | ^~~~~~~~ -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] - 42 | class CptTable { - | ^~~~~~~~ -In file included from /usr/include/hdf5/serial/H5Cpp.h:42: -/usr/include/hdf5/serial/H5CompType.h:40:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' - 40 | CompType(const CompType &original); - | ^~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] - 42 | class CptTable { - | ^~~~~~~~ -In file included from /usr/include/hdf5/serial/H5Cpp.h:26: -/usr/include/hdf5/serial/H5DcreatProp.h:137:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' - 137 | DSetCreatPropList(const DSetCreatPropList &orig); - | ^~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5DcreatProp.h:29:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] - 29 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { - | ^~~~~~~~~~~~~~~~~ -In file included from /usr/include/hdf5/serial/H5Cpp.h:25: -/usr/include/hdf5/serial/H5OcreatProp.h:53:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' - 53 | ObjCreatPropList(const ObjCreatPropList &original); - | ^~~~~~~~~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here - 42 | class CptTable { - | ^~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here - 132 | table = CptTable(name, sizeof(typename T::data), loc_); - | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 162 | attr = loc.createAttribute(name, *dataType, dp); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:31: +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 178 | attr = loc.createAttribute(name, *strType, dp); + | ^ +In file included from /usr/include/hdf5/serial/H5Cpp.h:34: /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 164 | attr = loc.openAttribute(name); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 180 | attr = loc.openAttribute(name); + | ^ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ -[ 60%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/matrixfreeoperator.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/matrixfreeoperator.cc.o -MF CMakeFiles/votca_xtp.dir/matrixfreeoperator.cc.o.d -o CMakeFiles/votca_xtp.dir/matrixfreeoperator.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/matrixfreeoperator.cc -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 278 | parent = loc.createGroup(name); + | ^ +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 280 | parent = loc.openGroup(name); + | ^ +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 294 | parent = loc.createGroup(name); + | ^ +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 296 | parent = loc.openGroup(name); + | ^ +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = double; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = double; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/bse_population.h:50:6: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -10208,6 +10214,22 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ +In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:34, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/classicalsegment.h:25, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/qmpackage.h:31, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/qmpackagefactory.h:28, + from /build/reproducible-path/votca-2022.1/xtp/src/libxtp/jobcalculators/iqm.cc:32: +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 81 | loc_ = loc; + | ^~~ +In file included from /usr/include/hdf5/serial/H5Cpp.h:47, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:25: +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] @@ -10356,10 +10378,10 @@ In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:34, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/classicalsegment.h:25, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/qmpackage.h:31, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/qmpackagefactory.h:28, - from /build/reproducible-path/votca-2022.1/xtp/src/libxtp/jobcalculators/iqm.cc:32: + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/segment.h:30, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/qmpair.h:32, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/gnode.h:25, + from /build/reproducible-path/votca-2022.1/xtp/src/libxtp/kmccalculator.cc:28: /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; @@ -10369,8 +10391,6 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ -[ 60%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/md2qmengine.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/md2qmengine.cc.o -MF CMakeFiles/votca_xtp.dir/md2qmengine.cc.o.d -o CMakeFiles/votca_xtp.dir/md2qmengine.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/md2qmengine.cc In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] @@ -10386,6 +10406,8 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ +[ 60%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/md2qmengine.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/md2qmengine.cc.o -MF CMakeFiles/votca_xtp.dir/md2qmengine.cc.o.d -o CMakeFiles/votca_xtp.dir/md2qmengine.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/md2qmengine.cc /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); @@ -10412,58 +10434,6 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::Atom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::Atom]' -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 42 | class CptTable { - | ^~~~~~~~ -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] - 42 | class CptTable { - | ^~~~~~~~ -In file included from /usr/include/hdf5/serial/H5Cpp.h:42: -/usr/include/hdf5/serial/H5CompType.h:40:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' - 40 | CompType(const CompType &original); - | ^~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] - 42 | class CptTable { - | ^~~~~~~~ -In file included from /usr/include/hdf5/serial/H5Cpp.h:26: -/usr/include/hdf5/serial/H5DcreatProp.h:137:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' - 137 | DSetCreatPropList(const DSetCreatPropList &orig); - | ^~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5DcreatProp.h:29:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] - 29 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { - | ^~~~~~~~~~~~~~~~~ -In file included from /usr/include/hdf5/serial/H5Cpp.h:25: -/usr/include/hdf5/serial/H5OcreatProp.h:53:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' - 53 | ObjCreatPropList(const ObjCreatPropList &original); - | ^~~~~~~~~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here - 42 | class CptTable { - | ^~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here - 132 | table = CptTable(name, sizeof(typename T::data), loc_); - | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::Atom]' -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 162 | attr = loc.createAttribute(name, *dataType, dp); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 164 | attr = loc.openAttribute(name); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] @@ -10492,8 +10462,6 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ -[ 60%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/mmregion.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/mmregion.cc.o -MF CMakeFiles/votca_xtp.dir/mmregion.cc.o.d -o CMakeFiles/votca_xtp.dir/mmregion.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/mmregion.cc /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] @@ -10508,9 +10476,9 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' -/build/reproducible-path/votca-2022.1/xtp/src/libxtp/jobtopology.cc:351:4: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = double; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = double; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/bse_population.h:50:6: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -10523,9 +10491,8 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = double; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = double; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/bse_population.h:50:6: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -10538,10 +10505,8 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ -[ 60%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/molden.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/molden.cc.o -MF CMakeFiles/votca_xtp.dir/molden.cc.o.d -o CMakeFiles/votca_xtp.dir/molden.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/molden.cc -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::Atom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::Atom]' /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { @@ -10578,7 +10543,7 @@ | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::Atom]' /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); @@ -10592,10 +10557,25 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ -[ 60%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/nbo.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/nbo.cc.o -MF CMakeFiles/votca_xtp.dir/nbo.cc.o.d -o CMakeFiles/votca_xtp.dir/nbo.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/nbo.cc -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::StaticSite; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::StaticSite]' +[ 60%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/mmregion.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/mmregion.cc.o -MF CMakeFiles/votca_xtp.dir/mmregion.cc.o.d -o CMakeFiles/votca_xtp.dir/mmregion.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/mmregion.cc +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' +/build/reproducible-path/votca-2022.1/xtp/src/libxtp/jobtopology.cc:351:4: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 162 | attr = loc.createAttribute(name, *dataType, dp); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 164 | attr = loc.openAttribute(name); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { @@ -10630,6 +10610,22 @@ /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 162 | attr = loc.createAttribute(name, *dataType, dp); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 164 | attr = loc.openAttribute(name); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::Atom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::Atom]' /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here @@ -10666,8 +10662,6 @@ /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -[ 60%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/numerical_integration/amplitude_integration.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/numerical_integration/amplitude_integration.cc.o -MF CMakeFiles/votca_xtp.dir/numerical_integration/amplitude_integration.cc.o.d -o CMakeFiles/votca_xtp.dir/numerical_integration/amplitude_integration.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/numerical_integration/amplitude_integration.cc /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::Atom]' @@ -10684,30 +10678,50 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ -In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:34, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/classicalsegment.h:25, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/mmregion.h:25, - from /build/reproducible-path/votca-2022.1/xtp/src/libxtp/mmregion.cc:21: -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 81 | loc_ = loc; - | ^~~ -In file included from /usr/include/hdf5/serial/H5Cpp.h:47, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:25: +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::StaticSite; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::StaticSite]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 42 | class CptTable { + | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] + 42 | class CptTable { + | ^~~~~~~~ +In file included from /usr/include/hdf5/serial/H5Cpp.h:42: +/usr/include/hdf5/serial/H5CompType.h:40:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' + 40 | CompType(const CompType &original); + | ^~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] + 42 | class CptTable { + | ^~~~~~~~ +In file included from /usr/include/hdf5/serial/H5Cpp.h:26: +/usr/include/hdf5/serial/H5DcreatProp.h:137:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' + 137 | DSetCreatPropList(const DSetCreatPropList &orig); + | ^~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5DcreatProp.h:29:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] + 29 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { + | ^~~~~~~~~~~~~~~~~ +In file included from /usr/include/hdf5/serial/H5Cpp.h:25: +/usr/include/hdf5/serial/H5OcreatProp.h:53:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' + 53 | ObjCreatPropList(const ObjCreatPropList &original); + | ^~~~~~~~~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here + 42 | class CptTable { + | ^~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here + 132 | table = CptTable(name, sizeof(typename T::data), loc_); + | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +[ 60%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/molden.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/molden.cc.o -MF CMakeFiles/votca_xtp.dir/molden.cc.o.d -o CMakeFiles/votca_xtp.dir/molden.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/molden.cc In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:34, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/segment.h:30, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/qmpair.h:32, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/qmnblist.h:30, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/topology.h:31, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/md2qmengine.h:26, - from /build/reproducible-path/votca-2022.1/xtp/src/libxtp/md2qmengine.cc:19: + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/classicalsegment.h:25, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/mmregion.h:25, + from /build/reproducible-path/votca-2022.1/xtp/src/libxtp/mmregion.cc:21: /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; @@ -10758,6 +10772,24 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ +In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:34, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/segment.h:30, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/qmpair.h:32, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/qmnblist.h:30, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/topology.h:31, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/md2qmengine.h:26, + from /build/reproducible-path/votca-2022.1/xtp/src/libxtp/md2qmengine.cc:19: +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 81 | loc_ = loc; + | ^~~ +In file included from /usr/include/hdf5/serial/H5Cpp.h:47, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:25: +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] @@ -10813,6 +10845,10 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ +[ 60%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/nbo.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/nbo.cc.o -MF CMakeFiles/votca_xtp.dir/nbo.cc.o.d -o CMakeFiles/votca_xtp.dir/nbo.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/nbo.cc +[ 60%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/numerical_integration/amplitude_integration.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/numerical_integration/amplitude_integration.cc.o -MF CMakeFiles/votca_xtp.dir/numerical_integration/amplitude_integration.cc.o.d -o CMakeFiles/votca_xtp.dir/numerical_integration/amplitude_integration.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/numerical_integration/amplitude_integration.cc /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] @@ -10827,9 +10863,12 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::Atom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::Atom]' -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here +[ 60%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/numerical_integration/density_integration.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/numerical_integration/density_integration.cc.o -MF CMakeFiles/votca_xtp.dir/numerical_integration/density_integration.cc.o.d -o CMakeFiles/votca_xtp.dir/numerical_integration/density_integration.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/numerical_integration/density_integration.cc +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::PolarSite; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::PolarSite]' +/build/reproducible-path/votca-2022.1/xtp/src/libxtp/mmregion.cc:54:19: required from 'void votca::xtp::MMRegion::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::ClassicalSegment]' +/build/reproducible-path/votca-2022.1/xtp/src/libxtp/mmregion.cc:73:16: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ @@ -10865,8 +10904,9 @@ | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::Atom]' -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::PolarSite]' +/build/reproducible-path/votca-2022.1/xtp/src/libxtp/mmregion.cc:54:19: required from 'void votca::xtp::MMRegion::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::ClassicalSegment]' +/build/reproducible-path/votca-2022.1/xtp/src/libxtp/mmregion.cc:73:16: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -10879,10 +10919,9 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::PolarSite; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::PolarSite]' -/build/reproducible-path/votca-2022.1/xtp/src/libxtp/mmregion.cc:54:19: required from 'void votca::xtp::MMRegion::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::ClassicalSegment]' -/build/reproducible-path/votca-2022.1/xtp/src/libxtp/mmregion.cc:73:16: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::Atom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::Atom]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ @@ -10918,9 +10957,8 @@ | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::PolarSite]' -/build/reproducible-path/votca-2022.1/xtp/src/libxtp/mmregion.cc:54:19: required from 'void votca::xtp::MMRegion::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::ClassicalSegment]' -/build/reproducible-path/votca-2022.1/xtp/src/libxtp/mmregion.cc:73:16: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::Atom]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -10933,6 +10971,8 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ +[ 60%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/numerical_integration/vxc_potential.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/numerical_integration/vxc_potential.cc.o -MF CMakeFiles/votca_xtp.dir/numerical_integration/vxc_potential.cc.o.d -o CMakeFiles/votca_xtp.dir/numerical_integration/vxc_potential.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/numerical_integration/vxc_potential.cc In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/orbitals.h:31, @@ -10988,75 +11028,10 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ -In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/ecpaobasis.h:24, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/aopotential.h:26, - from /build/reproducible-path/votca-2022.1/xtp/src/libxtp/numerical_integration/amplitude_integration.cc:22: -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 81 | loc_ = loc; - | ^~~ -In file included from /usr/include/hdf5/serial/H5Cpp.h:47, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:25: -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ -In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:31: -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 178 | attr = loc.createAttribute(name, *strType, dp); - | ^ -In file included from /usr/include/hdf5/serial/H5Cpp.h:34: -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 180 | attr = loc.openAttribute(name); - | ^ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 278 | parent = loc.createGroup(name); - | ^ -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 280 | parent = loc.openGroup(name); - | ^ -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 294 | parent = loc.createGroup(name); - | ^ -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 296 | parent = loc.openGroup(name); - | ^ -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 162 | attr = loc.createAttribute(name, *dataType, dp); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 164 | attr = loc.openAttribute(name); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ +[ 61%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/openmp_cuda.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/openmp_cuda.cc.o -MF CMakeFiles/votca_xtp.dir/openmp_cuda.cc.o.d -o CMakeFiles/votca_xtp.dir/openmp_cuda.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/openmp_cuda.cc +[ 61%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/orbitals.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/orbitals.cc.o -MF CMakeFiles/votca_xtp.dir/orbitals.cc.o.d -o CMakeFiles/votca_xtp.dir/orbitals.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/orbitals.cc /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] @@ -11071,14 +11046,10 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ -[ 60%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/numerical_integration/density_integration.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/numerical_integration/density_integration.cc.o -MF CMakeFiles/votca_xtp.dir/numerical_integration/density_integration.cc.o.d -o CMakeFiles/votca_xtp.dir/numerical_integration/density_integration.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/numerical_integration/density_integration.cc -[ 60%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/numerical_integration/vxc_potential.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/numerical_integration/vxc_potential.cc.o -MF CMakeFiles/votca_xtp.dir/numerical_integration/vxc_potential.cc.o.d -o CMakeFiles/votca_xtp.dir/numerical_integration/vxc_potential.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/numerical_integration/vxc_potential.cc -[ 61%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/openmp_cuda.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/openmp_cuda.cc.o -MF CMakeFiles/votca_xtp.dir/openmp_cuda.cc.o.d -o CMakeFiles/votca_xtp.dir/openmp_cuda.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/openmp_cuda.cc -[ 61%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/orbitals.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/orbitals.cc.o -MF CMakeFiles/votca_xtp.dir/orbitals.cc.o.d -o CMakeFiles/votca_xtp.dir/orbitals.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/orbitals.cc +[ 61%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/orbreorder.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/orbreorder.cc.o -MF CMakeFiles/votca_xtp.dir/orbreorder.cc.o.d -o CMakeFiles/votca_xtp.dir/orbreorder.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/orbreorder.cc +[ 61%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/parallelxjobcalc.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/parallelxjobcalc.cc.o -MF CMakeFiles/votca_xtp.dir/parallelxjobcalc.cc.o.d -o CMakeFiles/votca_xtp.dir/parallelxjobcalc.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/parallelxjobcalc.cc /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here @@ -11131,23 +11102,11 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ -[ 61%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/orbreorder.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/orbreorder.cc.o -MF CMakeFiles/votca_xtp.dir/orbreorder.cc.o.d -o CMakeFiles/votca_xtp.dir/orbreorder.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/orbreorder.cc -[ 61%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/parallelxjobcalc.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/parallelxjobcalc.cc.o -MF CMakeFiles/votca_xtp.dir/parallelxjobcalc.cc.o.d -o CMakeFiles/votca_xtp.dir/parallelxjobcalc.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/parallelxjobcalc.cc -[ 61%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/polarregion.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/polarregion.cc.o -MF CMakeFiles/votca_xtp.dir/polarregion.cc.o.d -o CMakeFiles/votca_xtp.dir/polarregion.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/polarregion.cc -[ 61%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/polarsite.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/polarsite.cc.o -MF CMakeFiles/votca_xtp.dir/polarsite.cc.o.d -o CMakeFiles/votca_xtp.dir/polarsite.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/polarsite.cc -[ 61%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/populationanalysis.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/populationanalysis.cc.o -MF CMakeFiles/votca_xtp.dir/populationanalysis.cc.o.d -o CMakeFiles/votca_xtp.dir/populationanalysis.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/populationanalysis.cc -[ 61%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/progressobserver.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/progressobserver.cc.o -MF CMakeFiles/votca_xtp.dir/progressobserver.cc.o.d -o CMakeFiles/votca_xtp.dir/progressobserver.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/progressobserver.cc In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/ecpaobasis.h:24, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/aopotential.h:26, - from /build/reproducible-path/votca-2022.1/xtp/src/libxtp/numerical_integration/density_integration.cc:22: + from /build/reproducible-path/votca-2022.1/xtp/src/libxtp/numerical_integration/amplitude_integration.cc:22: /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; @@ -11198,24 +11157,6 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ -In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:34, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/classicalsegment.h:25, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/eeinteractor.h:25, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/dipoledipoleinteraction.h:23, - from /build/reproducible-path/votca-2022.1/xtp/src/libxtp/polarregion.cc:25: -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 81 | loc_ = loc; - | ^~~ -In file included from /usr/include/hdf5/serial/H5Cpp.h:47, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:25: -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ -[ 63%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/qmatom.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/qmatom.cc.o -MF CMakeFiles/votca_xtp.dir/qmatom.cc.o.d -o CMakeFiles/votca_xtp.dir/qmatom.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/qmatom.cc /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] @@ -11230,6 +11171,22 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ +[ 61%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/polarregion.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/polarregion.cc.o -MF CMakeFiles/votca_xtp.dir/polarregion.cc.o.d -o CMakeFiles/votca_xtp.dir/polarregion.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/polarregion.cc +In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/ecpaobasis.h:24, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/aopotential.h:26, + from /build/reproducible-path/votca-2022.1/xtp/src/libxtp/numerical_integration/density_integration.cc:22: +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 81 | loc_ = loc; + | ^~~ +In file included from /usr/include/hdf5/serial/H5Cpp.h:47, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:25: +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] @@ -11271,6 +11228,32 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 162 | attr = loc.createAttribute(name, *dataType, dp); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 164 | attr = loc.openAttribute(name); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +[ 61%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/polarsite.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/polarsite.cc.o -MF CMakeFiles/votca_xtp.dir/polarsite.cc.o.d -o CMakeFiles/votca_xtp.dir/polarsite.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/polarsite.cc +In file included from /usr/include/libint2/engine.impl.h:34, + from /usr/include/libint2/engine.h:1020, + from /usr/include/libint2/cxxapi.h:45, + from /usr/include/libint2.hpp:24, + from /build/reproducible-path/votca-2022.1/xtp/src/libxtp/libint2_calls.cc:30: +/usr/include/libint2/boys.h: In constructor 'libint2::TennoGmEval::TennoGmEval(unsigned int, Real)': +/usr/include/libint2/boys.h:875: note: '-Wmisleading-indentation' is disabled from this point onwards, since column-tracking was disabled due to the size of the code/headers + 875 | if (mmax > cheb_table_mmax) + | +/usr/include/libint2/boys.h:875: note: adding '-flarge-source-files' will allow for more column-tracking support, at the expense of compilation time and memory In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/orbitals.h:31, @@ -11284,16 +11267,6 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ -In file included from /usr/include/libint2/engine.impl.h:34, - from /usr/include/libint2/engine.h:1020, - from /usr/include/libint2/cxxapi.h:45, - from /usr/include/libint2.hpp:24, - from /build/reproducible-path/votca-2022.1/xtp/src/libxtp/libint2_calls.cc:30: -/usr/include/libint2/boys.h: In constructor 'libint2::TennoGmEval::TennoGmEval(unsigned int, Real)': -/usr/include/libint2/boys.h:875: note: '-Wmisleading-indentation' is disabled from this point onwards, since column-tracking was disabled due to the size of the code/headers - 875 | if (mmax > cheb_table_mmax) - | -/usr/include/libint2/boys.h:875: note: adding '-flarge-source-files' will allow for more column-tracking support, at the expense of compilation time and memory In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] @@ -11335,22 +11308,46 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ +[ 61%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/populationanalysis.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/populationanalysis.cc.o -MF CMakeFiles/votca_xtp.dir/populationanalysis.cc.o.d -o CMakeFiles/votca_xtp.dir/populationanalysis.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/populationanalysis.cc +[ 61%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/progressobserver.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/progressobserver.cc.o -MF CMakeFiles/votca_xtp.dir/progressobserver.cc.o.d -o CMakeFiles/votca_xtp.dir/progressobserver.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/progressobserver.cc +[ 63%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/qmatom.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/qmatom.cc.o -MF CMakeFiles/votca_xtp.dir/qmatom.cc.o.d -o CMakeFiles/votca_xtp.dir/qmatom.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/qmatom.cc [ 63%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/qmcalculator.cc.o cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/qmcalculator.cc.o -MF CMakeFiles/votca_xtp.dir/qmcalculator.cc.o.d -o CMakeFiles/votca_xtp.dir/qmcalculator.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/qmcalculator.cc [ 63%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/qmmolecule.cc.o cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/qmmolecule.cc.o -MF CMakeFiles/votca_xtp.dir/qmmolecule.cc.o.d -o CMakeFiles/votca_xtp.dir/qmmolecule.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/qmmolecule.cc -In file included from /build/reproducible-path/votca-2022.1/xtp/src/libxtp/polarsite.cc:31: +In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:34, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/classicalsegment.h:25, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/eeinteractor.h:25, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/dipoledipoleinteraction.h:23, + from /build/reproducible-path/votca-2022.1/xtp/src/libxtp/polarregion.cc:25: /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:47, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:30: + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ -[ 63%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/qmnblist.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/qmnblist.cc.o -MF CMakeFiles/votca_xtp.dir/qmnblist.cc.o.d -o CMakeFiles/votca_xtp.dir/qmnblist.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/qmnblist.cc +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 162 | attr = loc.createAttribute(name, *dataType, dp); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 164 | attr = loc.openAttribute(name); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/orbitals.h:31, @@ -11406,25 +11403,6 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ -In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:34, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/segment.h:30, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/qmpair.h:32, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/qmnblist.h:30, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/topology.h:31, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/jobcalculator.h:32, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/parallelxjobcalc.h:31, - from /build/reproducible-path/votca-2022.1/xtp/src/libxtp/parallelxjobcalc.cc:28: -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 81 | loc_ = loc; - | ^~~ -In file included from /usr/include/hdf5/serial/H5Cpp.h:47, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:25: -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] @@ -11466,48 +11444,6 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 162 | attr = loc.createAttribute(name, *dataType, dp); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 164 | attr = loc.openAttribute(name); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 162 | attr = loc.createAttribute(name, *dataType, dp); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 164 | attr = loc.openAttribute(name); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 162 | attr = loc.createAttribute(name, *dataType, dp); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 164 | attr = loc.openAttribute(name); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2022.1/xtp/src/libxtp/orbitals.cc:576:4: required from here @@ -11574,47 +11510,16 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::Atom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::Atom]' -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 42 | class CptTable { - | ^~~~~~~~ -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] - 42 | class CptTable { - | ^~~~~~~~ -In file included from /usr/include/hdf5/serial/H5Cpp.h:42: -/usr/include/hdf5/serial/H5CompType.h:40:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' - 40 | CompType(const CompType &original); - | ^~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] - 42 | class CptTable { - | ^~~~~~~~ -In file included from /usr/include/hdf5/serial/H5Cpp.h:26: -/usr/include/hdf5/serial/H5DcreatProp.h:137:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' - 137 | DSetCreatPropList(const DSetCreatPropList &orig); - | ^~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5DcreatProp.h:29:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] - 29 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { - | ^~~~~~~~~~~~~~~~~ -In file included from /usr/include/hdf5/serial/H5Cpp.h:25: -/usr/include/hdf5/serial/H5OcreatProp.h:53:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' - 53 | ObjCreatPropList(const ObjCreatPropList &original); - | ^~~~~~~~~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here - 42 | class CptTable { - | ^~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here - 132 | table = CptTable(name, sizeof(typename T::data), loc_); - | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/orbitals.h:31, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/populationanalysis.h:26, - from /build/reproducible-path/votca-2022.1/xtp/src/libxtp/populationanalysis.cc:21: + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:34, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/segment.h:30, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/qmpair.h:32, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/qmnblist.h:30, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/topology.h:31, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/jobcalculator.h:32, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/parallelxjobcalc.h:31, + from /build/reproducible-path/votca-2022.1/xtp/src/libxtp/parallelxjobcalc.cc:28: /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; @@ -11624,22 +11529,6 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::Atom]' -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 162 | attr = loc.createAttribute(name, *dataType, dp); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 164 | attr = loc.openAttribute(name); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] @@ -11681,8 +11570,6 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ -[ 63%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/qmpackage.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/qmpackage.cc.o -MF CMakeFiles/votca_xtp.dir/qmpackage.cc.o.d -o CMakeFiles/votca_xtp.dir/qmpackage.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/qmpackage.cc /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] @@ -11697,8 +11584,34 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 162 | attr = loc.createAttribute(name, *dataType, dp); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 164 | attr = loc.openAttribute(name); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +In file included from /build/reproducible-path/votca-2022.1/xtp/src/libxtp/polarsite.cc:31: +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 81 | loc_ = loc; + | ^~~ +In file included from /usr/include/hdf5/serial/H5Cpp.h:47, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:30: +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ +[ 63%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/qmnblist.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/qmnblist.cc.o -MF CMakeFiles/votca_xtp.dir/qmnblist.cc.o.d -o CMakeFiles/votca_xtp.dir/qmnblist.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/qmnblist.cc +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::Atom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::Atom]' /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { @@ -11735,7 +11648,7 @@ | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::Atom]' /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); @@ -11749,8 +11662,48 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here +[ 63%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/qmpackage.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/qmpackage.cc.o -MF CMakeFiles/votca_xtp.dir/qmpackage.cc.o.d -o CMakeFiles/votca_xtp.dir/qmpackage.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/qmpackage.cc +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 42 | class CptTable { + | ^~~~~~~~ +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] + 42 | class CptTable { + | ^~~~~~~~ +In file included from /usr/include/hdf5/serial/H5Cpp.h:42: +/usr/include/hdf5/serial/H5CompType.h:40:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' + 40 | CompType(const CompType &original); + | ^~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] + 42 | class CptTable { + | ^~~~~~~~ +In file included from /usr/include/hdf5/serial/H5Cpp.h:26: +/usr/include/hdf5/serial/H5DcreatProp.h:137:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' + 137 | DSetCreatPropList(const DSetCreatPropList &orig); + | ^~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5DcreatProp.h:29:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] + 29 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { + | ^~~~~~~~~~~~~~~~~ +In file included from /usr/include/hdf5/serial/H5Cpp.h:25: +/usr/include/hdf5/serial/H5OcreatProp.h:53:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' + 53 | ObjCreatPropList(const ObjCreatPropList &original); + | ^~~~~~~~~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here + 42 | class CptTable { + | ^~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here + 132 | table = CptTable(name, sizeof(typename T::data), loc_); + | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -11773,9 +11726,8 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = double; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = double; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/bse_population.h:50:6: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -11790,15 +11742,11 @@ | ^~~~~~~~~ [ 63%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/qmpackages/orca.cc.o cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/qmpackages/orca.cc.o -MF CMakeFiles/votca_xtp.dir/qmpackages/orca.cc.o.d -o CMakeFiles/votca_xtp.dir/qmpackages/orca.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/qmpackages/orca.cc -[ 63%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/qmpackages/xtpdft.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/qmpackages/xtpdft.cc.o -MF CMakeFiles/votca_xtp.dir/qmpackages/xtpdft.cc.o.d -o CMakeFiles/votca_xtp.dir/qmpackages/xtpdft.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/qmpackages/xtpdft.cc In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:34, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/segment.h:30, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/qmpair.h:32, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/qmnblist.h:30, - from /build/reproducible-path/votca-2022.1/xtp/src/libxtp/qmnblist.cc:21: + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/orbitals.h:31, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/populationanalysis.h:26, + from /build/reproducible-path/votca-2022.1/xtp/src/libxtp/populationanalysis.cc:21: /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; @@ -11849,49 +11797,65 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ -[ 63%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/qmpair.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/qmpair.cc.o -MF CMakeFiles/votca_xtp.dir/qmpair.cc.o.d -o CMakeFiles/votca_xtp.dir/qmpair.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/qmpair.cc -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::StaticSite; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::StaticSite]' -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 42 | class CptTable { - | ^~~~~~~~ +In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, + from /build/reproducible-path/votca-2022.1/xtp/src/libxtp/qmmolecule.cc:27: +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 81 | loc_ = loc; + | ^~~ +In file included from /usr/include/hdf5/serial/H5Cpp.h:47, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:27: /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] - 42 | class CptTable { - | ^~~~~~~~ -In file included from /usr/include/hdf5/serial/H5Cpp.h:42: -/usr/include/hdf5/serial/H5CompType.h:40:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' - 40 | CompType(const CompType &original); - | ^~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] - 42 | class CptTable { - | ^~~~~~~~ -In file included from /usr/include/hdf5/serial/H5Cpp.h:26: -/usr/include/hdf5/serial/H5DcreatProp.h:137:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' - 137 | DSetCreatPropList(const DSetCreatPropList &orig); - | ^~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5DcreatProp.h:29:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] - 29 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { - | ^~~~~~~~~~~~~~~~~ -In file included from /usr/include/hdf5/serial/H5Cpp.h:25: -/usr/include/hdf5/serial/H5OcreatProp.h:53:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' - 53 | ObjCreatPropList(const ObjCreatPropList &original); - | ^~~~~~~~~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here - 42 | class CptTable { - | ^~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here - 132 | table = CptTable(name, sizeof(typename T::data), loc_); - | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +In file included from /build/reproducible-path/votca-2022.1/xtp/src/libxtp/qmmolecule.cc:28: +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 178 | attr = loc.createAttribute(name, *strType, dp); + | ^ +In file included from /usr/include/hdf5/serial/H5Cpp.h:34: +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 180 | attr = loc.openAttribute(name); + | ^ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 278 | parent = loc.createGroup(name); + | ^ +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 280 | parent = loc.openGroup(name); + | ^ +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 294 | parent = loc.createGroup(name); + | ^ +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 296 | parent = loc.openGroup(name); + | ^ +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ +[ 63%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/qmpackages/xtpdft.cc.o /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/qmpackages/xtpdft.cc.o -MF CMakeFiles/votca_xtp.dir/qmpackages/xtpdft.cc.o.d -o CMakeFiles/votca_xtp.dir/qmpackages/xtpdft.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/qmpackages/xtpdft.cc /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ @@ -11901,10 +11865,8 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::StaticSite]' -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -11917,53 +11879,23 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMPair; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': -/build/reproducible-path/votca-2022.1/xtp/src/libxtp/qmnblist.cc:45:39: required from here -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 42 | class CptTable { - | ^~~~~~~~ -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] - 42 | class CptTable { - | ^~~~~~~~ -In file included from /usr/include/hdf5/serial/H5Cpp.h:42: -/usr/include/hdf5/serial/H5CompType.h:40:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' - 40 | CompType(const CompType &original); - | ^~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] - 42 | class CptTable { - | ^~~~~~~~ -In file included from /usr/include/hdf5/serial/H5Cpp.h:26: -/usr/include/hdf5/serial/H5DcreatProp.h:137:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' - 137 | DSetCreatPropList(const DSetCreatPropList &orig); - | ^~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5DcreatProp.h:29:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] - 29 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { - | ^~~~~~~~~~~~~~~~~ -In file included from /usr/include/hdf5/serial/H5Cpp.h:25: -/usr/include/hdf5/serial/H5OcreatProp.h:53:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' - 53 | ObjCreatPropList(const ObjCreatPropList &original); - | ^~~~~~~~~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here - 42 | class CptTable { - | ^~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here - 132 | table = CptTable(name, sizeof(typename T::data), loc_); - | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, - from /build/reproducible-path/votca-2022.1/xtp/src/libxtp/qmmolecule.cc:27: + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:34, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/segment.h:30, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/qmpair.h:32, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/qmnblist.h:30, + from /build/reproducible-path/votca-2022.1/xtp/src/libxtp/qmnblist.cc:21: /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:47, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:27: + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ -In file included from /build/reproducible-path/votca-2022.1/xtp/src/libxtp/qmmolecule.cc:28: +In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); @@ -12004,10 +11936,9 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::Atom]' -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = double; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = double; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/bse_population.h:50:6: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -12034,6 +11965,57 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMPair; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': +/build/reproducible-path/votca-2022.1/xtp/src/libxtp/qmnblist.cc:45:39: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 42 | class CptTable { + | ^~~~~~~~ +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] + 42 | class CptTable { + | ^~~~~~~~ +In file included from /usr/include/hdf5/serial/H5Cpp.h:42: +/usr/include/hdf5/serial/H5CompType.h:40:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' + 40 | CompType(const CompType &original); + | ^~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] + 42 | class CptTable { + | ^~~~~~~~ +In file included from /usr/include/hdf5/serial/H5Cpp.h:26: +/usr/include/hdf5/serial/H5DcreatProp.h:137:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' + 137 | DSetCreatPropList(const DSetCreatPropList &orig); + | ^~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5DcreatProp.h:29:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] + 29 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { + | ^~~~~~~~~~~~~~~~~ +In file included from /usr/include/hdf5/serial/H5Cpp.h:25: +/usr/include/hdf5/serial/H5OcreatProp.h:53:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' + 53 | ObjCreatPropList(const ObjCreatPropList &original); + | ^~~~~~~~~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here + 42 | class CptTable { + | ^~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here + 132 | table = CptTable(name, sizeof(typename T::data), loc_); + | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::Atom]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 162 | attr = loc.createAttribute(name, *dataType, dp); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 164 | attr = loc.openAttribute(name); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::StaticSite; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::StaticSite]' /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here @@ -12086,6 +12068,8 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ +[ 63%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/qmpair.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/qmpair.cc.o -MF CMakeFiles/votca_xtp.dir/qmpair.cc.o.d -o CMakeFiles/votca_xtp.dir/qmpair.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/qmpair.cc In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/ecpaobasis.h:24, @@ -12099,6 +12083,58 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 42 | class CptTable { + | ^~~~~~~~ +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] + 42 | class CptTable { + | ^~~~~~~~ +In file included from /usr/include/hdf5/serial/H5Cpp.h:42: +/usr/include/hdf5/serial/H5CompType.h:40:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' + 40 | CompType(const CompType &original); + | ^~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] + 42 | class CptTable { + | ^~~~~~~~ +In file included from /usr/include/hdf5/serial/H5Cpp.h:26: +/usr/include/hdf5/serial/H5DcreatProp.h:137:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' + 137 | DSetCreatPropList(const DSetCreatPropList &orig); + | ^~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5DcreatProp.h:29:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] + 29 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { + | ^~~~~~~~~~~~~~~~~ +In file included from /usr/include/hdf5/serial/H5Cpp.h:25: +/usr/include/hdf5/serial/H5OcreatProp.h:53:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' + 53 | ObjCreatPropList(const ObjCreatPropList &original); + | ^~~~~~~~~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here + 42 | class CptTable { + | ^~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here + 132 | table = CptTable(name, sizeof(typename T::data), loc_); + | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 162 | attr = loc.createAttribute(name, *dataType, dp); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 164 | attr = loc.openAttribute(name); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] @@ -12146,8 +12182,8 @@ cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/qmstate.cc.o -MF CMakeFiles/votca_xtp.dir/qmstate.cc.o.d -o CMakeFiles/votca_xtp.dir/qmstate.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/qmstate.cc [ 64%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/qmtool.cc.o cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/qmtool.cc.o -MF CMakeFiles/votca_xtp.dir/qmtool.cc.o.d -o CMakeFiles/votca_xtp.dir/qmtool.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/qmtool.cc -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::StaticSite; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::StaticSite]' /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { @@ -12184,7 +12220,7 @@ | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::StaticSite]' /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); @@ -12268,8 +12304,6 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ -[ 64%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/region.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/region.cc.o -MF CMakeFiles/votca_xtp.dir/region.cc.o.d -o CMakeFiles/votca_xtp.dir/region.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/region.cc In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:34, @@ -12340,10 +12374,8 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ -[ 64%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/segment.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/segment.cc.o -MF CMakeFiles/votca_xtp.dir/segment.cc.o.d -o CMakeFiles/votca_xtp.dir/segment.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/segment.cc -[ 64%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/segmentmapper.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/segmentmapper.cc.o -MF CMakeFiles/votca_xtp.dir/segmentmapper.cc.o.d -o CMakeFiles/votca_xtp.dir/segmentmapper.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/segmentmapper.cc +[ 64%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/region.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/region.cc.o -MF CMakeFiles/votca_xtp.dir/region.cc.o.d -o CMakeFiles/votca_xtp.dir/region.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/region.cc /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::Atom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::Atom]' /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here @@ -12503,6 +12535,24 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 162 | attr = loc.createAttribute(name, *dataType, dp); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 164 | attr = loc.openAttribute(name); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +[ 64%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/segment.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/segment.cc.o -MF CMakeFiles/votca_xtp.dir/segment.cc.o.d -o CMakeFiles/votca_xtp.dir/segment.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/segment.cc +[ 64%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/segmentmapper.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/segmentmapper.cc.o -MF CMakeFiles/votca_xtp.dir/segmentmapper.cc.o.d -o CMakeFiles/votca_xtp.dir/segmentmapper.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/segmentmapper.cc In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/ecpaobasis.h:24, @@ -12559,38 +12609,8 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 162 | attr = loc.createAttribute(name, *dataType, dp); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 164 | attr = loc.openAttribute(name); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ [ 64%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/self_energy_evaluators/sigma_cda.cc.o cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/self_energy_evaluators/sigma_cda.cc.o -MF CMakeFiles/votca_xtp.dir/self_energy_evaluators/sigma_cda.cc.o.d -o CMakeFiles/votca_xtp.dir/self_energy_evaluators/sigma_cda.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/self_energy_evaluators/sigma_cda.cc -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 162 | attr = loc.createAttribute(name, *dataType, dp); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 164 | attr = loc.openAttribute(name); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -[ 64%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/self_energy_evaluators/sigma_exact.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/self_energy_evaluators/sigma_exact.cc.o -MF CMakeFiles/votca_xtp.dir/self_energy_evaluators/sigma_exact.cc.o.d -o CMakeFiles/votca_xtp.dir/self_energy_evaluators/sigma_exact.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/self_energy_evaluators/sigma_exact.cc /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::StaticSite; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::StaticSite]' /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here @@ -12643,64 +12663,6 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ -[ 65%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/self_energy_evaluators/sigma_ppm.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/self_energy_evaluators/sigma_ppm.cc.o -MF CMakeFiles/votca_xtp.dir/self_energy_evaluators/sigma_ppm.cc.o.d -o CMakeFiles/votca_xtp.dir/self_energy_evaluators/sigma_ppm.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/self_energy_evaluators/sigma_ppm.cc -[ 65%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/stateapplication.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/stateapplication.cc.o -MF CMakeFiles/votca_xtp.dir/stateapplication.cc.o.d -o CMakeFiles/votca_xtp.dir/stateapplication.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/stateapplication.cc -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 42 | class CptTable { - | ^~~~~~~~ -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] - 42 | class CptTable { - | ^~~~~~~~ -In file included from /usr/include/hdf5/serial/H5Cpp.h:42: -/usr/include/hdf5/serial/H5CompType.h:40:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' - 40 | CompType(const CompType &original); - | ^~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] - 42 | class CptTable { - | ^~~~~~~~ -In file included from /usr/include/hdf5/serial/H5Cpp.h:26: -/usr/include/hdf5/serial/H5DcreatProp.h:137:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' - 137 | DSetCreatPropList(const DSetCreatPropList &orig); - | ^~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5DcreatProp.h:29:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] - 29 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { - | ^~~~~~~~~~~~~~~~~ -In file included from /usr/include/hdf5/serial/H5Cpp.h:25: -/usr/include/hdf5/serial/H5OcreatProp.h:53:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' - 53 | ObjCreatPropList(const ObjCreatPropList &original); - | ^~~~~~~~~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here - 42 | class CptTable { - | ^~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here - 132 | table = CptTable(name, sizeof(typename T::data), loc_); - | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 162 | attr = loc.createAttribute(name, *dataType, dp); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 164 | attr = loc.openAttribute(name); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -[ 65%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/statefilter_base.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/statefilter_base.cc.o -MF CMakeFiles/votca_xtp.dir/statefilter_base.cc.o.d -o CMakeFiles/votca_xtp.dir/statefilter_base.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/statefilter_base.cc In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:34, @@ -12772,22 +12734,22 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ -In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:34, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/classicalsegment.h:25, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/eeinteractor.h:25, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/polarregion.h:25, - from /build/reproducible-path/votca-2022.1/xtp/src/libxtp/region.cc:24: -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 81 | loc_ = loc; - | ^~~ -In file included from /usr/include/hdf5/serial/H5Cpp.h:47, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:25: -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 162 | attr = loc.createAttribute(name, *dataType, dp); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 164 | attr = loc.openAttribute(name); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +[ 64%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/self_energy_evaluators/sigma_exact.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/self_energy_evaluators/sigma_exact.cc.o -MF CMakeFiles/votca_xtp.dir/self_energy_evaluators/sigma_exact.cc.o.d -o CMakeFiles/votca_xtp.dir/self_energy_evaluators/sigma_exact.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/self_energy_evaluators/sigma_exact.cc /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::Atom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::Atom]' /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here @@ -12824,47 +12786,6 @@ /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:31: -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 178 | attr = loc.createAttribute(name, *strType, dp); - | ^ -In file included from /usr/include/hdf5/serial/H5Cpp.h:34: -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 180 | attr = loc.openAttribute(name); - | ^ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 278 | parent = loc.createGroup(name); - | ^ -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 280 | parent = loc.openGroup(name); - | ^ -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 294 | parent = loc.createGroup(name); - | ^ -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 296 | parent = loc.openGroup(name); - | ^ -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::Atom]' @@ -12881,6 +12802,28 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ +[ 65%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/self_energy_evaluators/sigma_ppm.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/self_energy_evaluators/sigma_ppm.cc.o -MF CMakeFiles/votca_xtp.dir/self_energy_evaluators/sigma_ppm.cc.o.d -o CMakeFiles/votca_xtp.dir/self_energy_evaluators/sigma_ppm.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/self_energy_evaluators/sigma_ppm.cc +In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:34, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/classicalsegment.h:25, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/eeinteractor.h:25, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/polarregion.h:25, + from /build/reproducible-path/votca-2022.1/xtp/src/libxtp/region.cc:24: +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 81 | loc_ = loc; + | ^~~ +In file included from /usr/include/hdf5/serial/H5Cpp.h:47, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:25: +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ +[ 65%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/stateapplication.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/stateapplication.cc.o -MF CMakeFiles/votca_xtp.dir/stateapplication.cc.o.d -o CMakeFiles/votca_xtp.dir/stateapplication.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/stateapplication.cc +[ 65%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/statefilter_base.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/statefilter_base.cc.o -MF CMakeFiles/votca_xtp.dir/statefilter_base.cc.o.d -o CMakeFiles/votca_xtp.dir/statefilter_base.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/statefilter_base.cc /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] @@ -12895,20 +12838,6 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ -In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:34, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/segment.h:30, - from /build/reproducible-path/votca-2022.1/xtp/src/libxtp/segment.cc:21: -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 81 | loc_ = loc; - | ^~~ -In file included from /usr/include/hdf5/serial/H5Cpp.h:47, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:25: -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] @@ -12950,25 +12879,9 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 162 | attr = loc.createAttribute(name, *dataType, dp); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 164 | attr = loc.openAttribute(name); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -[ 65%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/statefilters/DeltaQ_filter.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/statefilters/DeltaQ_filter.cc.o -MF CMakeFiles/votca_xtp.dir/statefilters/DeltaQ_filter.cc.o.d -o CMakeFiles/votca_xtp.dir/statefilters/DeltaQ_filter.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/statefilters/DeltaQ_filter.cc -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::Atom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::Atom]' -/build/reproducible-path/votca-2022.1/xtp/src/libxtp/segment.cc:43:34: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ @@ -13002,25 +12915,10 @@ /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = double; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = double; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' -/build/reproducible-path/votca-2022.1/xtp/src/libxtp/segment.cc:46:4: required from here -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 162 | attr = loc.createAttribute(name, *dataType, dp); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 164 | attr = loc.openAttribute(name); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::Atom]' -/build/reproducible-path/votca-2022.1/xtp/src/libxtp/segment.cc:43:34: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -13048,12 +12946,13 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ +[ 65%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/statefilters/DeltaQ_filter.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/statefilters/DeltaQ_filter.cc.o -MF CMakeFiles/votca_xtp.dir/statefilters/DeltaQ_filter.cc.o.d -o CMakeFiles/votca_xtp.dir/statefilters/DeltaQ_filter.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/statefilters/DeltaQ_filter.cc In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:34, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/classicalsegment.h:25, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/segmentmapper.h:30, - from /build/reproducible-path/votca-2022.1/xtp/src/libxtp/segmentmapper.cc:24: + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/segment.h:30, + from /build/reproducible-path/votca-2022.1/xtp/src/libxtp/segment.cc:21: /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; @@ -13104,8 +13003,6 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ -[ 65%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/statefilters/Density_filter.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/statefilters/Density_filter.cc.o -MF CMakeFiles/votca_xtp.dir/statefilters/Density_filter.cc.o.d -o CMakeFiles/votca_xtp.dir/statefilters/Density_filter.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/statefilters/Density_filter.cc /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] @@ -13120,6 +13017,57 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::Atom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::Atom]' +/build/reproducible-path/votca-2022.1/xtp/src/libxtp/segment.cc:43:34: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 42 | class CptTable { + | ^~~~~~~~ +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] + 42 | class CptTable { + | ^~~~~~~~ +In file included from /usr/include/hdf5/serial/H5Cpp.h:42: +/usr/include/hdf5/serial/H5CompType.h:40:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' + 40 | CompType(const CompType &original); + | ^~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] + 42 | class CptTable { + | ^~~~~~~~ +In file included from /usr/include/hdf5/serial/H5Cpp.h:26: +/usr/include/hdf5/serial/H5DcreatProp.h:137:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' + 137 | DSetCreatPropList(const DSetCreatPropList &orig); + | ^~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5DcreatProp.h:29:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] + 29 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { + | ^~~~~~~~~~~~~~~~~ +In file included from /usr/include/hdf5/serial/H5Cpp.h:25: +/usr/include/hdf5/serial/H5OcreatProp.h:53:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' + 53 | ObjCreatPropList(const ObjCreatPropList &original); + | ^~~~~~~~~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here + 42 | class CptTable { + | ^~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here + 132 | table = CptTable(name, sizeof(typename T::data), loc_); + | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = double; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = double; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' +/build/reproducible-path/votca-2022.1/xtp/src/libxtp/segment.cc:46:4: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 162 | attr = loc.createAttribute(name, *dataType, dp); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 164 | attr = loc.openAttribute(name); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::StaticSite; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::StaticSite]' /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here @@ -13158,8 +13106,8 @@ | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::StaticSite]' -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::Atom]' +/build/reproducible-path/votca-2022.1/xtp/src/libxtp/segment.cc:43:34: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -13172,8 +13120,10 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::StaticSite]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -13186,17 +13136,12 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ -[ 65%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/statefilters/Localisation_filter.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/statefilters/Localisation_filter.cc.o -MF CMakeFiles/votca_xtp.dir/statefilters/Localisation_filter.cc.o.d -o CMakeFiles/votca_xtp.dir/statefilters/Localisation_filter.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/statefilters/Localisation_filter.cc In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:34, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/segment.h:30, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/qmpair.h:32, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/qmnblist.h:30, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/topology.h:31, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/stateapplication.h:26, - from /build/reproducible-path/votca-2022.1/xtp/src/libxtp/stateapplication.cc:25: + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/classicalsegment.h:25, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/segmentmapper.h:30, + from /build/reproducible-path/votca-2022.1/xtp/src/libxtp/segmentmapper.cc:24: /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; @@ -13247,20 +13192,6 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ -In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/orbitals.h:31, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/gw.h:26, - from /build/reproducible-path/votca-2022.1/xtp/src/libxtp/self_energy_evaluators/sigma_cda.cc:21: -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 81 | loc_ = loc; - | ^~~ -In file included from /usr/include/hdf5/serial/H5Cpp.h:47, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:25: -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] @@ -13275,6 +13206,20 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ +In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/orbitals.h:31, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/gw.h:26, + from /build/reproducible-path/votca-2022.1/xtp/src/libxtp/self_energy_evaluators/sigma_cda.cc:21: +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 81 | loc_ = loc; + | ^~~ +In file included from /usr/include/hdf5/serial/H5Cpp.h:47, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:25: +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] @@ -13316,11 +13261,29 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 162 | attr = loc.createAttribute(name, *dataType, dp); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 164 | attr = loc.openAttribute(name); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/orbitals.h:31, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/statefilter_base.h:33, - from /build/reproducible-path/votca-2022.1/xtp/src/libxtp/statefilter_base.cc:21: + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:34, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/segment.h:30, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/qmpair.h:32, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/qmnblist.h:30, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/topology.h:31, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/stateapplication.h:26, + from /build/reproducible-path/votca-2022.1/xtp/src/libxtp/stateapplication.cc:25: /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; @@ -13371,42 +13334,22 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::Atom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::Atom]' -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 42 | class CptTable { - | ^~~~~~~~ -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] - 42 | class CptTable { - | ^~~~~~~~ -In file included from /usr/include/hdf5/serial/H5Cpp.h:42: -/usr/include/hdf5/serial/H5CompType.h:40:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' - 40 | CompType(const CompType &original); - | ^~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] - 42 | class CptTable { - | ^~~~~~~~ -In file included from /usr/include/hdf5/serial/H5Cpp.h:26: -/usr/include/hdf5/serial/H5DcreatProp.h:137:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' - 137 | DSetCreatPropList(const DSetCreatPropList &orig); - | ^~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5DcreatProp.h:29:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] - 29 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { - | ^~~~~~~~~~~~~~~~~ -In file included from /usr/include/hdf5/serial/H5Cpp.h:25: -/usr/include/hdf5/serial/H5OcreatProp.h:53:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' - 53 | ObjCreatPropList(const ObjCreatPropList &original); - | ^~~~~~~~~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here - 42 | class CptTable { - | ^~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here - 132 | table = CptTable(name, sizeof(typename T::data), loc_); - | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +[ 65%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/statefilters/Density_filter.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/statefilters/Density_filter.cc.o -MF CMakeFiles/votca_xtp.dir/statefilters/Density_filter.cc.o.d -o CMakeFiles/votca_xtp.dir/statefilters/Density_filter.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/statefilters/Density_filter.cc +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 162 | attr = loc.createAttribute(name, *dataType, dp); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 164 | attr = loc.openAttribute(name); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] @@ -13459,22 +13402,6 @@ | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::Atom]' -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 162 | attr = loc.createAttribute(name, *dataType, dp); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 164 | attr = loc.openAttribute(name); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::StaticSite]' /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] @@ -13489,8 +13416,8 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::PolarSite; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::PolarSite]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::Atom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::Atom]' /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { @@ -13527,7 +13454,7 @@ | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::PolarSite]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::Atom]' /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); @@ -13541,27 +13468,11 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ -[ 65%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/statefilters/OscillatorStrength_filter.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/statefilters/OscillatorStrength_filter.cc.o -MF CMakeFiles/votca_xtp.dir/statefilters/OscillatorStrength_filter.cc.o.d -o CMakeFiles/votca_xtp.dir/statefilters/OscillatorStrength_filter.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/statefilters/OscillatorStrength_filter.cc -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 162 | attr = loc.createAttribute(name, *dataType, dp); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 164 | attr = loc.openAttribute(name); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/orbitals.h:31, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/populationanalysis.h:26, - from /build/reproducible-path/votca-2022.1/xtp/src/libxtp/statefilters/DeltaQ_filter.cc:21: + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/statefilter_base.h:33, + from /build/reproducible-path/votca-2022.1/xtp/src/libxtp/statefilter_base.cc:21: /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; @@ -13615,9 +13526,8 @@ In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/orbitals.h:31, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/statefilter_base.h:33, - from /build/reproducible-path/votca-2022.1/xtp/src/libxtp/statefilters/Density_filter.h:25, - from /build/reproducible-path/votca-2022.1/xtp/src/libxtp/statefilters/Density_filter.cc:21: + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/populationanalysis.h:26, + from /build/reproducible-path/votca-2022.1/xtp/src/libxtp/statefilters/DeltaQ_filter.cc:21: /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; @@ -13668,10 +13578,24 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ -[ 65%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/statefilters/Overlap_filter.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/statefilters/Overlap_filter.cc.o -MF CMakeFiles/votca_xtp.dir/statefilters/Overlap_filter.cc.o.d -o CMakeFiles/votca_xtp.dir/statefilters/Overlap_filter.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/statefilters/Overlap_filter.cc -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 162 | attr = loc.createAttribute(name, *dataType, dp); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 164 | attr = loc.openAttribute(name); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +[ 65%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/statefilters/Localisation_filter.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/statefilters/Localisation_filter.cc.o -MF CMakeFiles/votca_xtp.dir/statefilters/Localisation_filter.cc.o.d -o CMakeFiles/votca_xtp.dir/statefilters/Localisation_filter.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/statefilters/Localisation_filter.cc +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::PolarSite; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::PolarSite]' /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { @@ -13708,7 +13632,7 @@ | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::PolarSite]' /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); @@ -13727,6 +13651,7 @@ /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +[ 65%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/statefilters/OscillatorStrength_filter.cc.o /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ @@ -13736,8 +13661,9 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ -[ 67%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/statesaver.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/statesaver.cc.o -MF CMakeFiles/votca_xtp.dir/statesaver.cc.o.d -o CMakeFiles/votca_xtp.dir/statesaver.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/statesaver.cc +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/statefilters/OscillatorStrength_filter.cc.o -MF CMakeFiles/votca_xtp.dir/statefilters/OscillatorStrength_filter.cc.o.d -o CMakeFiles/votca_xtp.dir/statefilters/OscillatorStrength_filter.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/statefilters/OscillatorStrength_filter.cc +[ 65%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/statefilters/Overlap_filter.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/statefilters/Overlap_filter.cc.o -MF CMakeFiles/votca_xtp.dir/statefilters/Overlap_filter.cc.o.d -o CMakeFiles/votca_xtp.dir/statefilters/Overlap_filter.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/statefilters/Overlap_filter.cc /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = double; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = double; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/bse_population.h:50:6: required from here @@ -13753,39 +13679,6 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ -[ 67%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/statetracker.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/statetracker.cc.o -MF CMakeFiles/votca_xtp.dir/statetracker.cc.o.d -o CMakeFiles/votca_xtp.dir/statetracker.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/statetracker.cc -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 162 | attr = loc.createAttribute(name, *dataType, dp); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 164 | attr = loc.openAttribute(name); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = double; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = double; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' -/build/reproducible-path/votca-2022.1/xtp/src/libxtp/statefilters/Density_filter.cc:68:4: required from here -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 162 | attr = loc.createAttribute(name, *dataType, dp); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 164 | attr = loc.openAttribute(name); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -[ 67%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/staticsite.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/staticsite.cc.o -MF CMakeFiles/votca_xtp.dir/staticsite.cc.o.d -o CMakeFiles/votca_xtp.dir/staticsite.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/staticsite.cc /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here @@ -13838,6 +13731,8 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ +[ 67%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/statesaver.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/statesaver.cc.o -MF CMakeFiles/votca_xtp.dir/statesaver.cc.o.d -o CMakeFiles/votca_xtp.dir/statesaver.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/statesaver.cc /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here @@ -13942,11 +13837,16 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ +[ 67%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/statetracker.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/statetracker.cc.o -MF CMakeFiles/votca_xtp.dir/statetracker.cc.o.d -o CMakeFiles/votca_xtp.dir/statetracker.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/statetracker.cc +[ 67%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/staticsite.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/staticsite.cc.o -MF CMakeFiles/votca_xtp.dir/staticsite.cc.o.d -o CMakeFiles/votca_xtp.dir/staticsite.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/staticsite.cc In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/orbitals.h:31, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/populationanalysis.h:26, - from /build/reproducible-path/votca-2022.1/xtp/src/libxtp/statefilters/Localisation_filter.cc:21: + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/statefilter_base.h:33, + from /build/reproducible-path/votca-2022.1/xtp/src/libxtp/statefilters/Density_filter.h:25, + from /build/reproducible-path/votca-2022.1/xtp/src/libxtp/statefilters/Density_filter.cc:21: /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; @@ -13999,25 +13899,10 @@ | ^~~~~ [ 67%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/symmetric_matrix.cc.o cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/symmetric_matrix.cc.o -MF CMakeFiles/votca_xtp.dir/symmetric_matrix.cc.o.d -o CMakeFiles/votca_xtp.dir/symmetric_matrix.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/symmetric_matrix.cc -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 162 | attr = loc.createAttribute(name, *dataType, dp); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 164 | attr = loc.openAttribute(name); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ [ 67%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/threecenter.cc.o cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/threecenter.cc.o -MF CMakeFiles/votca_xtp.dir/threecenter.cc.o.d -o CMakeFiles/votca_xtp.dir/threecenter.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/threecenter.cc -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = double; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = double; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/bse_population.h:50:6: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -14030,8 +13915,6 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ -[ 67%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/tools/apdft.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/tools/apdft.cc.o -MF CMakeFiles/votca_xtp.dir/tools/apdft.cc.o.d -o CMakeFiles/votca_xtp.dir/tools/apdft.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/tools/apdft.cc In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:34, @@ -14091,23 +13974,37 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ -In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/orbitals.h:31, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/statefilter_base.h:33, - from /build/reproducible-path/votca-2022.1/xtp/src/libxtp/statefilters/OscillatorStrength_filter.h:25, - from /build/reproducible-path/votca-2022.1/xtp/src/libxtp/statefilters/OscillatorStrength_filter.cc:21: -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 81 | loc_ = loc; - | ^~~ -In file included from /usr/include/hdf5/serial/H5Cpp.h:47, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:25: -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 162 | attr = loc.createAttribute(name, *dataType, dp); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 164 | attr = loc.openAttribute(name); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = double; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = double; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' +/build/reproducible-path/votca-2022.1/xtp/src/libxtp/statefilters/Density_filter.cc:68:4: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 162 | attr = loc.createAttribute(name, *dataType, dp); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 164 | attr = loc.openAttribute(name); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::Atom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::Atom]' /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { @@ -14132,20 +14029,6 @@ /usr/include/hdf5/serial/H5DcreatProp.h:29:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 29 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 162 | attr = loc.createAttribute(name, *dataType, dp); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 164 | attr = loc.openAttribute(name); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5OcreatProp.h:53:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 53 | ObjCreatPropList(const ObjCreatPropList &original); @@ -14158,7 +14041,7 @@ | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::Atom]' /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); @@ -14172,6 +14055,20 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ +In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/orbitals.h:31, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/populationanalysis.h:26, + from /build/reproducible-path/votca-2022.1/xtp/src/libxtp/statefilters/Localisation_filter.cc:21: +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 81 | loc_ = loc; + | ^~~ +In file included from /usr/include/hdf5/serial/H5Cpp.h:47, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:25: +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] @@ -14213,12 +14110,66 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ -[ 67%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/tools/dftgwbse.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/tools/dftgwbse.cc.o -MF CMakeFiles/votca_xtp.dir/tools/dftgwbse.cc.o.d -o CMakeFiles/votca_xtp.dir/tools/dftgwbse.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/tools/dftgwbse.cc -[ 67%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/tools/gencube.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/tools/gencube.cc.o -MF CMakeFiles/votca_xtp.dir/tools/gencube.cc.o.d -o CMakeFiles/votca_xtp.dir/tools/gencube.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/tools/gencube.cc -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::Atom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::Atom]' +[ 67%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/tools/apdft.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/tools/apdft.cc.o -MF CMakeFiles/votca_xtp.dir/tools/apdft.cc.o.d -o CMakeFiles/votca_xtp.dir/tools/apdft.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/tools/apdft.cc +In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/orbitals.h:31, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/statefilter_base.h:33, + from /build/reproducible-path/votca-2022.1/xtp/src/libxtp/statefilters/OscillatorStrength_filter.h:25, + from /build/reproducible-path/votca-2022.1/xtp/src/libxtp/statefilters/OscillatorStrength_filter.cc:21: +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 81 | loc_ = loc; + | ^~~ +In file included from /usr/include/hdf5/serial/H5Cpp.h:47, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:25: +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ +In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:31: +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 178 | attr = loc.createAttribute(name, *strType, dp); + | ^ +In file included from /usr/include/hdf5/serial/H5Cpp.h:34: +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 180 | attr = loc.openAttribute(name); + | ^ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 278 | parent = loc.createGroup(name); + | ^ +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 280 | parent = loc.openGroup(name); + | ^ +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 294 | parent = loc.createGroup(name); + | ^ +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 296 | parent = loc.openGroup(name); + | ^ +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { @@ -14255,7 +14206,7 @@ | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::Atom]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); @@ -14269,16 +14220,10 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ -In file included from /build/reproducible-path/votca-2022.1/xtp/src/libxtp/staticsite.cc:31: -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 81 | loc_ = loc; - | ^~~ -In file included from /usr/include/hdf5/serial/H5Cpp.h:47, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:30: -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ +[ 67%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/tools/dftgwbse.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/tools/dftgwbse.cc.o -MF CMakeFiles/votca_xtp.dir/tools/dftgwbse.cc.o.d -o CMakeFiles/votca_xtp.dir/tools/dftgwbse.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/tools/dftgwbse.cc +[ 67%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/tools/gencube.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/tools/gencube.cc.o -MF CMakeFiles/votca_xtp.dir/tools/gencube.cc.o.d -o CMakeFiles/votca_xtp.dir/tools/gencube.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/tools/gencube.cc /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] @@ -14293,23 +14238,6 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ -[ 68%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/tools/gpu_benchmark.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/tools/gpu_benchmark.cc.o -MF CMakeFiles/votca_xtp.dir/tools/gpu_benchmark.cc.o.d -o CMakeFiles/votca_xtp.dir/tools/gpu_benchmark.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/tools/gpu_benchmark.cc -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = double; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = double; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' -/build/reproducible-path/votca-2022.1/xtp/src/libxtp/statefilters/OscillatorStrength_filter.cc:56:4: required from here -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 162 | attr = loc.createAttribute(name, *dataType, dp); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 164 | attr = loc.openAttribute(name); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/orbitals.h:31, @@ -14366,65 +14294,60 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ -In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/orbitals.h:31, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/statetracker.h:29, - from /build/reproducible-path/votca-2022.1/xtp/src/libxtp/statetracker.cc:21: +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 162 | attr = loc.createAttribute(name, *dataType, dp); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 164 | attr = loc.openAttribute(name); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = double; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = double; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/bse_population.h:50:6: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 162 | attr = loc.createAttribute(name, *dataType, dp); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 164 | attr = loc.openAttribute(name); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +In file included from /build/reproducible-path/votca-2022.1/xtp/src/libxtp/staticsite.cc:31: /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:47, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:25: + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:30: /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ -In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:31: -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 178 | attr = loc.createAttribute(name, *strType, dp); - | ^ -In file included from /usr/include/hdf5/serial/H5Cpp.h:34: +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = double; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = double; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' +/build/reproducible-path/votca-2022.1/xtp/src/libxtp/statefilters/OscillatorStrength_filter.cc:56:4: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 162 | attr = loc.createAttribute(name, *dataType, dp); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 180 | attr = loc.openAttribute(name); - | ^ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 164 | attr = loc.openAttribute(name); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 278 | parent = loc.createGroup(name); - | ^ -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 280 | parent = loc.openGroup(name); - | ^ -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 294 | parent = loc.createGroup(name); - | ^ -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 296 | parent = loc.openGroup(name); - | ^ -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ -[ 68%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/tools/mol2orb.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/tools/mol2orb.cc.o -MF CMakeFiles/votca_xtp.dir/tools/mol2orb.cc.o.d -o CMakeFiles/votca_xtp.dir/tools/mol2orb.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/tools/mol2orb.cc -[ 68%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/tools/molpol.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/tools/molpol.cc.o -MF CMakeFiles/votca_xtp.dir/tools/molpol.cc.o.d -o CMakeFiles/votca_xtp.dir/tools/molpol.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/tools/molpol.cc /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here @@ -14477,8 +14400,6 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ -[ 68%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/tools/orb2fchk.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/tools/orb2fchk.cc.o -MF CMakeFiles/votca_xtp.dir/tools/orb2fchk.cc.o.d -o CMakeFiles/votca_xtp.dir/tools/orb2fchk.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/tools/orb2fchk.cc /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] @@ -14493,8 +14414,27 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here +[ 68%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/tools/gpu_benchmark.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/tools/gpu_benchmark.cc.o -MF CMakeFiles/votca_xtp.dir/tools/gpu_benchmark.cc.o.d -o CMakeFiles/votca_xtp.dir/tools/gpu_benchmark.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/tools/gpu_benchmark.cc +[ 68%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/tools/mol2orb.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/tools/mol2orb.cc.o -MF CMakeFiles/votca_xtp.dir/tools/mol2orb.cc.o.d -o CMakeFiles/votca_xtp.dir/tools/mol2orb.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/tools/mol2orb.cc +In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/orbitals.h:31, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/statetracker.h:29, + from /build/reproducible-path/votca-2022.1/xtp/src/libxtp/statetracker.cc:21: +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 81 | loc_ = loc; + | ^~~ +In file included from /usr/include/hdf5/serial/H5Cpp.h:47, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:25: +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = double; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = double; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' +/build/reproducible-path/votca-2022.1/xtp/src/libxtp/statefilters/Overlap_filter.cc:174:4: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -14507,11 +14447,105 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ -[ 68%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/tools/orb2mol.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/tools/orb2mol.cc.o -MF CMakeFiles/votca_xtp.dir/tools/orb2mol.cc.o.d -o CMakeFiles/votca_xtp.dir/tools/orb2mol.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/tools/orb2mol.cc -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = double; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = double; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' -/build/reproducible-path/votca-2022.1/xtp/src/libxtp/statefilters/Overlap_filter.cc:174:4: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 42 | class CptTable { + | ^~~~~~~~ +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] + 42 | class CptTable { + | ^~~~~~~~ +In file included from /usr/include/hdf5/serial/H5Cpp.h:42: +/usr/include/hdf5/serial/H5CompType.h:40:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' + 40 | CompType(const CompType &original); + | ^~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] + 42 | class CptTable { + | ^~~~~~~~ +In file included from /usr/include/hdf5/serial/H5Cpp.h:26: +/usr/include/hdf5/serial/H5DcreatProp.h:137:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' + 137 | DSetCreatPropList(const DSetCreatPropList &orig); + | ^~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5DcreatProp.h:29:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] + 29 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { + | ^~~~~~~~~~~~~~~~~ +In file included from /usr/include/hdf5/serial/H5Cpp.h:25: +/usr/include/hdf5/serial/H5OcreatProp.h:53:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' + 53 | ObjCreatPropList(const ObjCreatPropList &original); + | ^~~~~~~~~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here + 42 | class CptTable { + | ^~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here + 132 | table = CptTable(name, sizeof(typename T::data), loc_); + | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 162 | attr = loc.createAttribute(name, *dataType, dp); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 164 | attr = loc.openAttribute(name); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:31: +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 178 | attr = loc.createAttribute(name, *strType, dp); + | ^ +In file included from /usr/include/hdf5/serial/H5Cpp.h:34: +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 180 | attr = loc.openAttribute(name); + | ^ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 278 | parent = loc.createGroup(name); + | ^ +[ 68%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/tools/molpol.cc.o +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 280 | parent = loc.openGroup(name); + | ^ +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 294 | parent = loc.createGroup(name); + | ^ +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 296 | parent = loc.openGroup(name); + | ^ +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/tools/molpol.cc.o -MF CMakeFiles/votca_xtp.dir/tools/molpol.cc.o.d -o CMakeFiles/votca_xtp.dir/tools/molpol.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/tools/molpol.cc +[ 68%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/tools/orb2fchk.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/tools/orb2fchk.cc.o -MF CMakeFiles/votca_xtp.dir/tools/orb2fchk.cc.o.d -o CMakeFiles/votca_xtp.dir/tools/orb2fchk.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/tools/orb2fchk.cc +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -14524,6 +14558,8 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ +[ 68%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/tools/orb2mol.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/tools/orb2mol.cc.o -MF CMakeFiles/votca_xtp.dir/tools/orb2mol.cc.o.d -o CMakeFiles/votca_xtp.dir/tools/orb2mol.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/tools/orb2mol.cc [ 68%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/tools/spectrum.cc.o cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/tools/spectrum.cc.o -MF CMakeFiles/votca_xtp.dir/tools/spectrum.cc.o.d -o CMakeFiles/votca_xtp.dir/tools/spectrum.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/tools/spectrum.cc [ 68%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/topology.cc.o @@ -14640,6 +14676,22 @@ | ^~~~~ In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:34, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/classicalsegment.h:25, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/eeinteractor.h:25, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/polarregion.h:25, + from /build/reproducible-path/votca-2022.1/xtp/src/libxtp/tools/molpol.cc:21: +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 81 | loc_ = loc; + | ^~~ +In file included from /usr/include/hdf5/serial/H5Cpp.h:47, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:25: +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ +In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/orbitals.h:31, from /build/reproducible-path/votca-2022.1/xtp/src/libxtp/tools/apdft.cc:23: /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': @@ -14692,32 +14744,21 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ -[ 68%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/trustregion.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/trustregion.cc.o -MF CMakeFiles/votca_xtp.dir/trustregion.cc.o.d -o CMakeFiles/votca_xtp.dir/trustregion.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/trustregion.cc -[ 68%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/version.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/version.cc.o -MF CMakeFiles/votca_xtp.dir/version.cc.o.d -o CMakeFiles/votca_xtp.dir/version.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/version.cc -/build/reproducible-path/votca-2022.1/xtp/src/libxtp/version.cc:43:54: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] - 43 | " (compiled " __DATE__ ", " __TIME__ ")"; - | ^~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/src/libxtp/version.cc:43:68: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] - 43 | " (compiled " __DATE__ ", " __TIME__ ")"; - | ^~~~~~~~ -In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:34, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/classicalsegment.h:25, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/eeinteractor.h:25, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/polarregion.h:25, - from /build/reproducible-path/votca-2022.1/xtp/src/libxtp/tools/molpol.cc:21: -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 81 | loc_ = loc; - | ^~~ -In file included from /usr/include/hdf5/serial/H5Cpp.h:47, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:25: -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ +In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:31: +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 178 | attr = loc.createAttribute(name, *strType, dp); + | ^ +In file included from /usr/include/hdf5/serial/H5Cpp.h:34: +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 180 | attr = loc.openAttribute(name); + | ^ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/orbitals.h:31, @@ -14732,6 +14773,32 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 278 | parent = loc.createGroup(name); + | ^ +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 280 | parent = loc.openGroup(name); + | ^ +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 294 | parent = loc.createGroup(name); + | ^ +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 296 | parent = loc.openGroup(name); + | ^ +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] @@ -14773,6 +14840,96 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 42 | class CptTable { + | ^~~~~~~~ +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] + 42 | class CptTable { + | ^~~~~~~~ +In file included from /usr/include/hdf5/serial/H5Cpp.h:42: +/usr/include/hdf5/serial/H5CompType.h:40:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' + 40 | CompType(const CompType &original); + | ^~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] + 42 | class CptTable { + | ^~~~~~~~ +In file included from /usr/include/hdf5/serial/H5Cpp.h:26: +/usr/include/hdf5/serial/H5DcreatProp.h:137:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' + 137 | DSetCreatPropList(const DSetCreatPropList &orig); + | ^~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5DcreatProp.h:29:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] + 29 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { + | ^~~~~~~~~~~~~~~~~ +In file included from /usr/include/hdf5/serial/H5Cpp.h:25: +/usr/include/hdf5/serial/H5OcreatProp.h:53:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' + 53 | ObjCreatPropList(const ObjCreatPropList &original); + | ^~~~~~~~~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here + 42 | class CptTable { + | ^~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here + 132 | table = CptTable(name, sizeof(typename T::data), loc_); + | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 162 | attr = loc.createAttribute(name, *dataType, dp); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 164 | attr = loc.openAttribute(name); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +[ 68%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/trustregion.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/trustregion.cc.o -MF CMakeFiles/votca_xtp.dir/trustregion.cc.o.d -o CMakeFiles/votca_xtp.dir/trustregion.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/trustregion.cc +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 162 | attr = loc.createAttribute(name, *dataType, dp); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 164 | attr = loc.openAttribute(name); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +[ 68%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/version.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/version.cc.o -MF CMakeFiles/votca_xtp.dir/version.cc.o.d -o CMakeFiles/votca_xtp.dir/version.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/version.cc +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 162 | attr = loc.createAttribute(name, *dataType, dp); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 164 | attr = loc.openAttribute(name); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/src/libxtp/version.cc:43:54: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] + 43 | " (compiled " __DATE__ ", " __TIME__ ")"; + | ^~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/src/libxtp/version.cc:43:68: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] + 43 | " (compiled " __DATE__ ", " __TIME__ ")"; + | ^~~~~~~~ /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] @@ -14789,6 +14946,20 @@ | ^~~~~~~~~ [ 69%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/xtpapplication.cc.o cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_CHRONO_DYN_LINK -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_SYSTEM_DYN_LINK -DBOOST_TIMER_DYN_LINK -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/src/libxtp -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -std=c++17 -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/xtpapplication.cc.o -MF CMakeFiles/votca_xtp.dir/xtpapplication.cc.o.d -o CMakeFiles/votca_xtp.dir/xtpapplication.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/libxtp/xtpapplication.cc +In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/orbitals.h:31, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/molden.h:26, + from /build/reproducible-path/votca-2022.1/xtp/src/libxtp/tools/mol2orb.cc:7: +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 81 | loc_ = loc; + | ^~~ +In file included from /usr/include/hdf5/serial/H5Cpp.h:47, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:25: +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] @@ -14830,20 +15001,6 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 162 | attr = loc.createAttribute(name, *dataType, dp); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 164 | attr = loc.openAttribute(name); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/orbitals.h:31, @@ -14898,20 +15055,6 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 162 | attr = loc.createAttribute(name, *dataType, dp); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 164 | attr = loc.openAttribute(name); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here @@ -14964,8 +15107,8 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::StaticSite; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::StaticSite]' /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { @@ -15002,7 +15145,7 @@ | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::StaticSite]' /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); @@ -15033,9 +15176,8 @@ In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/orbitals.h:31, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/orbreorder.h:28, - from /build/reproducible-path/votca-2022.1/xtp/src/libxtp/tools/orb2mol.h:28, - from /build/reproducible-path/votca-2022.1/xtp/src/libxtp/tools/orb2mol.cc:1: + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/gaussianwriter.h:26, + from /build/reproducible-path/votca-2022.1/xtp/src/libxtp/tools/orb2fchk.cc:26: /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; @@ -15138,6 +15280,48 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 162 | attr = loc.createAttribute(name, *dataType, dp); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 164 | attr = loc.openAttribute(name); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 162 | attr = loc.createAttribute(name, *dataType, dp); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 164 | attr = loc.openAttribute(name); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 162 | attr = loc.createAttribute(name, *dataType, dp); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 164 | attr = loc.openAttribute(name); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/orbitals.h:31, @@ -15192,21 +15376,17 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ -In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/orbitals.h:31, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/gaussianwriter.h:26, - from /build/reproducible-path/votca-2022.1/xtp/src/libxtp/tools/orb2fchk.cc:26: +In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:36, + from /build/reproducible-path/votca-2022.1/xtp/src/libxtp/topology.cc:29: /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:47, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:25: + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:29: /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ -In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); @@ -15250,8 +15430,9 @@ In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/orbitals.h:31, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/molden.h:26, - from /build/reproducible-path/votca-2022.1/xtp/src/libxtp/tools/mol2orb.cc:7: + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/orbreorder.h:28, + from /build/reproducible-path/votca-2022.1/xtp/src/libxtp/tools/orb2mol.h:28, + from /build/reproducible-path/votca-2022.1/xtp/src/libxtp/tools/orb2mol.cc:1: /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; @@ -15280,17 +15461,6 @@ /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ -In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:36, - from /build/reproducible-path/votca-2022.1/xtp/src/libxtp/topology.cc:29: -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 81 | loc_ = loc; - | ^~~ -In file included from /usr/include/hdf5/serial/H5Cpp.h:47, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:29: -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ @@ -15313,26 +15483,12 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 178 | attr = loc.createAttribute(name, *strType, dp); - | ^ -In file included from /usr/include/hdf5/serial/H5Cpp.h:34: -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 180 | attr = loc.openAttribute(name); - | ^ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::StaticSite; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::StaticSite]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ @@ -15363,35 +15519,9 @@ /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 278 | parent = loc.createGroup(name); - | ^ -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 280 | parent = loc.openGroup(name); - | ^ -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 294 | parent = loc.createGroup(name); - | ^ -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 296 | parent = loc.openGroup(name); - | ^ -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::StaticSite]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); @@ -15485,36 +15615,46 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 162 | attr = loc.createAttribute(name, *dataType, dp); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 164 | attr = loc.openAttribute(name); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 162 | attr = loc.createAttribute(name, *dataType, dp); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 164 | attr = loc.openAttribute(name); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 42 | class CptTable { + | ^~~~~~~~ +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] + 42 | class CptTable { + | ^~~~~~~~ +In file included from /usr/include/hdf5/serial/H5Cpp.h:42: +/usr/include/hdf5/serial/H5CompType.h:40:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' + 40 | CompType(const CompType &original); + | ^~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] + 42 | class CptTable { + | ^~~~~~~~ +In file included from /usr/include/hdf5/serial/H5Cpp.h:26: +/usr/include/hdf5/serial/H5DcreatProp.h:137:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' + 137 | DSetCreatPropList(const DSetCreatPropList &orig); + | ^~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5DcreatProp.h:29:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] + 29 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { + | ^~~~~~~~~~~~~~~~~ +In file included from /usr/include/hdf5/serial/H5Cpp.h:25: +/usr/include/hdf5/serial/H5OcreatProp.h:53:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' + 53 | ObjCreatPropList(const ObjCreatPropList &original); + | ^~~~~~~~~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here + 42 | class CptTable { + | ^~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here + 132 | table = CptTable(name, sizeof(typename T::data), loc_); + | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -15659,60 +15799,8 @@ /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 42 | class CptTable { - | ^~~~~~~~ -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] - 42 | class CptTable { - | ^~~~~~~~ -In file included from /usr/include/hdf5/serial/H5Cpp.h:42: -/usr/include/hdf5/serial/H5CompType.h:40:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' - 40 | CompType(const CompType &original); - | ^~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] - 42 | class CptTable { - | ^~~~~~~~ -In file included from /usr/include/hdf5/serial/H5Cpp.h:26: -/usr/include/hdf5/serial/H5DcreatProp.h:137:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' - 137 | DSetCreatPropList(const DSetCreatPropList &orig); - | ^~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5DcreatProp.h:29:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] - 29 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { - | ^~~~~~~~~~~~~~~~~ -In file included from /usr/include/hdf5/serial/H5Cpp.h:25: -/usr/include/hdf5/serial/H5OcreatProp.h:53:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' - 53 | ObjCreatPropList(const ObjCreatPropList &original); - | ^~~~~~~~~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here - 42 | class CptTable { - | ^~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here - 132 | table = CptTable(name, sizeof(typename T::data), loc_); - | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 162 | attr = loc.createAttribute(name, *dataType, dp); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 164 | attr = loc.openAttribute(name); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::PolarSite; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::PolarSite]' /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { @@ -15749,7 +15837,7 @@ | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::PolarSite]' /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); @@ -15815,58 +15903,6 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::PolarSite; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::PolarSite]' -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 42 | class CptTable { - | ^~~~~~~~ -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] - 42 | class CptTable { - | ^~~~~~~~ -In file included from /usr/include/hdf5/serial/H5Cpp.h:42: -/usr/include/hdf5/serial/H5CompType.h:40:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' - 40 | CompType(const CompType &original); - | ^~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] - 42 | class CptTable { - | ^~~~~~~~ -In file included from /usr/include/hdf5/serial/H5Cpp.h:26: -/usr/include/hdf5/serial/H5DcreatProp.h:137:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' - 137 | DSetCreatPropList(const DSetCreatPropList &orig); - | ^~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5DcreatProp.h:29:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] - 29 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { - | ^~~~~~~~~~~~~~~~~ -In file included from /usr/include/hdf5/serial/H5Cpp.h:25: -/usr/include/hdf5/serial/H5OcreatProp.h:53:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' - 53 | ObjCreatPropList(const ObjCreatPropList &original); - | ^~~~~~~~~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here - 42 | class CptTable { - | ^~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here - 132 | table = CptTable(name, sizeof(typename T::data), loc_); - | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::PolarSite]' -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 162 | attr = loc.createAttribute(name, *dataType, dp); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 164 | attr = loc.openAttribute(name); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ [ 69%] Linking CXX shared library libvotca_xtp.so cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/cmake -E cmake_link_script CMakeFiles/votca_xtp.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libvotca_xtp.so.2022 -o libvotca_xtp.so.2022 CMakeFiles/votca_xtp.dir/GaussianQuadratureBase.cc.o CMakeFiles/votca_xtp.dir/ImaginaryAxisIntegration.cc.o CMakeFiles/votca_xtp.dir/IndexParser.cc.o CMakeFiles/votca_xtp.dir/anderson_mixing.cc.o CMakeFiles/votca_xtp.dir/aobasis.cc.o CMakeFiles/votca_xtp.dir/aomatrices/aoecp.cc.o CMakeFiles/votca_xtp.dir/aomatrices/aomatrix.cc.o CMakeFiles/votca_xtp.dir/aomatrices/aomultipole.cc.o CMakeFiles/votca_xtp.dir/aomatrices/aoplanewave.cc.o CMakeFiles/votca_xtp.dir/aomatrices/aopotential.cc.o CMakeFiles/votca_xtp.dir/aomatrices/aotransform.cc.o CMakeFiles/votca_xtp.dir/aoshell.cc.o CMakeFiles/votca_xtp.dir/atom.cc.o CMakeFiles/votca_xtp.dir/basisset.cc.o CMakeFiles/votca_xtp.dir/bfgs_trm.cc.o CMakeFiles/votca_xtp.dir/bsecoupling.cc.o CMakeFiles/votca_xtp.dir/calculators/eanalyze.cc.o CMakeFiles/votca_xtp.dir/calculators/einternal.cc.o CMakeFiles/votca_xtp.dir/calculators/ianalyze.cc.o CMakeFiles/votca_xtp.dir/calculators/kmclifetime.cc.o CMakeFiles/votca_xtp.dir/calculators/kmcmultiple.cc.o CMakeFiles/votca_xtp.dir/calculators/neighborlist.cc.o CMakeFiles/votca_xtp.dir/calculators/vaverage.cc.o CMakeFiles/votca_xtp.dir/checkpoint.cc.o CMakeFiles/votca_xtp.dir/classicalsegment.cc.o CMakeFiles/votca_xtp.dir/couplingbase.cc.o CMakeFiles/votca_xtp.dir/cubefile_writer.cc.o CMakeFiles/votca_xtp.dir/davidsonsolver.cc.o CMakeFiles/votca_xtp.dir/dftcoupling.cc.o CMakeFiles/votca_xtp.dir/dftengine/ERIs.cc.o CMakeFiles/votca_xtp.dir/dftengine/adiis.cc.o CMakeFiles/votca_xtp.dir/dftengine/convergenceacc.cc.o CMakeFiles/votca_xtp.dir/dftengine/dftengine.cc.o CMakeFiles/votca_xtp.dir/dftengine/diis.cc.o CMakeFiles/votca_xtp.dir/ecpaobasis.cc.o CMakeFiles/votca_xtp.dir/ecpbasisset.cc.o CMakeFiles/votca_xtp.dir/eeinteractor.cc.o CMakeFiles/votca_xtp.dir/energy_costfunction.cc.o CMakeFiles/votca_xtp.dir/esp2multipole.cc.o CMakeFiles/votca_xtp.dir/espfit.cc.o CMakeFiles/votca_xtp.dir/factories/calculatorfactory.cc.o CMakeFiles/votca_xtp.dir/factories/filterfactory.cc.o CMakeFiles/votca_xtp.dir/factories/jobcalculatorfactory.cc.o CMakeFiles/votca_xtp.dir/factories/qmpackagefactory.cc.o CMakeFiles/votca_xtp.dir/factories/quadrature_factory.cc.o CMakeFiles/votca_xtp.dir/factories/sigmafactory.cc.o CMakeFiles/votca_xtp.dir/factories/toolfactory.cc.o CMakeFiles/votca_xtp.dir/forces.cc.o CMakeFiles/votca_xtp.dir/gaussian_quadrature/gauss_hermite_quadrature.cc.o CMakeFiles/votca_xtp.dir/gaussian_quadrature/gauss_laguerre_quadrature.cc.o CMakeFiles/votca_xtp.dir/gaussian_quadrature/gauss_legendre_quadrature.cc.o CMakeFiles/votca_xtp.dir/gaussianwriter.cc.o CMakeFiles/votca_xtp.dir/geometry_optimization.cc.o CMakeFiles/votca_xtp.dir/gnode.cc.o CMakeFiles/votca_xtp.dir/grids/grid.cc.o CMakeFiles/votca_xtp.dir/grids/gridbox.cc.o CMakeFiles/votca_xtp.dir/grids/radial_euler_maclaurin_rule.cc.o CMakeFiles/votca_xtp.dir/grids/regular_grid.cc.o CMakeFiles/votca_xtp.dir/grids/sphere_lebedev_rule.cc.o CMakeFiles/votca_xtp.dir/grids/vxc_grid.cc.o CMakeFiles/votca_xtp.dir/gwbse/bse.cc.o CMakeFiles/votca_xtp.dir/gwbse/bse_operator.cc.o CMakeFiles/votca_xtp.dir/gwbse/gw.cc.o CMakeFiles/votca_xtp.dir/gwbse/gwbse.cc.o CMakeFiles/votca_xtp.dir/gwbse/gwbseengine.cc.o CMakeFiles/votca_xtp.dir/gwbse/ppm.cc.o CMakeFiles/votca_xtp.dir/gwbse/rpa.cc.o CMakeFiles/votca_xtp.dir/gwbse/sigma_base.cc.o CMakeFiles/votca_xtp.dir/gyration.cc.o CMakeFiles/votca_xtp.dir/job.cc.o CMakeFiles/votca_xtp.dir/jobcalculators/eqm.cc.o CMakeFiles/votca_xtp.dir/jobcalculators/iexcitoncl.cc.o CMakeFiles/votca_xtp.dir/jobcalculators/iqm.cc.o CMakeFiles/votca_xtp.dir/jobcalculators/qmmm.cc.o CMakeFiles/votca_xtp.dir/jobtopology.cc.o CMakeFiles/votca_xtp.dir/kmccalculator.cc.o CMakeFiles/votca_xtp.dir/libint2_calls.cc.o CMakeFiles/votca_xtp.dir/matrixfreeoperator.cc.o CMakeFiles/votca_xtp.dir/md2qmengine.cc.o CMakeFiles/votca_xtp.dir/mmregion.cc.o CMakeFiles/votca_xtp.dir/molden.cc.o CMakeFiles/votca_xtp.dir/nbo.cc.o CMakeFiles/votca_xtp.dir/numerical_integration/amplitude_integration.cc.o CMakeFiles/votca_xtp.dir/numerical_integration/density_integration.cc.o CMakeFiles/votca_xtp.dir/numerical_integration/vxc_potential.cc.o CMakeFiles/votca_xtp.dir/openmp_cuda.cc.o CMakeFiles/votca_xtp.dir/orbitals.cc.o CMakeFiles/votca_xtp.dir/orbreorder.cc.o CMakeFiles/votca_xtp.dir/parallelxjobcalc.cc.o CMakeFiles/votca_xtp.dir/polarregion.cc.o CMakeFiles/votca_xtp.dir/polarsite.cc.o CMakeFiles/votca_xtp.dir/populationanalysis.cc.o CMakeFiles/votca_xtp.dir/progressobserver.cc.o CMakeFiles/votca_xtp.dir/qmatom.cc.o CMakeFiles/votca_xtp.dir/qmcalculator.cc.o CMakeFiles/votca_xtp.dir/qmmolecule.cc.o CMakeFiles/votca_xtp.dir/qmnblist.cc.o CMakeFiles/votca_xtp.dir/qmpackage.cc.o CMakeFiles/votca_xtp.dir/qmpackages/orca.cc.o CMakeFiles/votca_xtp.dir/qmpackages/xtpdft.cc.o CMakeFiles/votca_xtp.dir/qmpair.cc.o CMakeFiles/votca_xtp.dir/qmregion.cc.o CMakeFiles/votca_xtp.dir/qmstate.cc.o CMakeFiles/votca_xtp.dir/qmtool.cc.o CMakeFiles/votca_xtp.dir/rate_engine.cc.o CMakeFiles/votca_xtp.dir/region.cc.o CMakeFiles/votca_xtp.dir/segment.cc.o CMakeFiles/votca_xtp.dir/segmentmapper.cc.o CMakeFiles/votca_xtp.dir/self_energy_evaluators/sigma_cda.cc.o CMakeFiles/votca_xtp.dir/self_energy_evaluators/sigma_exact.cc.o CMakeFiles/votca_xtp.dir/self_energy_evaluators/sigma_ppm.cc.o CMakeFiles/votca_xtp.dir/stateapplication.cc.o CMakeFiles/votca_xtp.dir/statefilter_base.cc.o CMakeFiles/votca_xtp.dir/statefilters/DeltaQ_filter.cc.o CMakeFiles/votca_xtp.dir/statefilters/Density_filter.cc.o CMakeFiles/votca_xtp.dir/statefilters/Localisation_filter.cc.o CMakeFiles/votca_xtp.dir/statefilters/OscillatorStrength_filter.cc.o CMakeFiles/votca_xtp.dir/statefilters/Overlap_filter.cc.o CMakeFiles/votca_xtp.dir/statesaver.cc.o CMakeFiles/votca_xtp.dir/statetracker.cc.o CMakeFiles/votca_xtp.dir/staticsite.cc.o CMakeFiles/votca_xtp.dir/symmetric_matrix.cc.o CMakeFiles/votca_xtp.dir/threecenter.cc.o CMakeFiles/votca_xtp.dir/tools/apdft.cc.o CMakeFiles/votca_xtp.dir/tools/dftgwbse.cc.o CMakeFiles/votca_xtp.dir/tools/gencube.cc.o CMakeFiles/votca_xtp.dir/tools/gpu_benchmark.cc.o CMakeFiles/votca_xtp.dir/tools/mol2orb.cc.o CMakeFiles/votca_xtp.dir/tools/molpol.cc.o CMakeFiles/votca_xtp.dir/tools/orb2fchk.cc.o CMakeFiles/votca_xtp.dir/tools/orb2mol.cc.o CMakeFiles/votca_xtp.dir/tools/spectrum.cc.o CMakeFiles/votca_xtp.dir/topology.cc.o CMakeFiles/votca_xtp.dir/trustregion.cc.o CMakeFiles/votca_xtp.dir/version.cc.o CMakeFiles/votca_xtp.dir/xtpapplication.cc.o -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial: ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libxc.a /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_system.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_timer.so.1.74.0 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so /usr/lib/x86_64-linux-gnu/libboost_chrono.so.1.74.0 @@ -15875,132 +15911,124 @@ [ 69%] Built target votca_xtp make -f xtp/src/tools/CMakeFiles/xtp_parallel.dir/build.make xtp/src/tools/CMakeFiles/xtp_parallel.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/src/tools/CMakeFiles/xtp_map.dir/build.make xtp/src/tools/CMakeFiles/xtp_map.dir/depend cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tools/CMakeFiles/xtp_parallel.dir/DependInfo.cmake --color= +make -f xtp/src/tools/CMakeFiles/xtp_map.dir/build.make xtp/src/tools/CMakeFiles/xtp_map.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tools/CMakeFiles/xtp_map.dir/DependInfo.cmake --color= make -f xtp/src/tools/CMakeFiles/xtp_run.dir/build.make xtp/src/tools/CMakeFiles/xtp_run.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tools/CMakeFiles/xtp_run.dir/DependInfo.cmake --color= -make -f xtp/src/tools/CMakeFiles/xtp_tools.dir/build.make xtp/src/tools/CMakeFiles/xtp_tools.dir/depend make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make -f xtp/src/tools/CMakeFiles/xtp_parallel.dir/build.make xtp/src/tools/CMakeFiles/xtp_parallel.dir/build -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tools/CMakeFiles/xtp_tools.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f xtp/src/tools/CMakeFiles/xtp_tools.dir/build.make xtp/src/tools/CMakeFiles/xtp_tools.dir/depend +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tools/CMakeFiles/xtp_tools.dir/DependInfo.cmake --color= make -f xtp/src/tests/CMakeFiles/unit_test_adiis.dir/build.make xtp/src/tests/CMakeFiles/unit_test_adiis.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_adiis.dir/DependInfo.cmake --color= make -f xtp/src/tests/CMakeFiles/unit_test_aobasis.dir/build.make xtp/src/tests/CMakeFiles/unit_test_aobasis.dir/depend +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_adiis.dir/DependInfo.cmake --color= +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_aobasis.dir/DependInfo.cmake --color= +[ 69%] Building CXX object xtp/src/tools/CMakeFiles/xtp_parallel.dir/xtp_parallel.cc.o +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f xtp/src/tests/CMakeFiles/unit_test_aomatrix.dir/build.make xtp/src/tests/CMakeFiles/unit_test_aomatrix.dir/depend make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tools && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tools/CMakeFiles/xtp_parallel.dir/xtp_parallel.cc.o -MF CMakeFiles/xtp_parallel.dir/xtp_parallel.cc.o.d -o CMakeFiles/xtp_parallel.dir/xtp_parallel.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tools/xtp_parallel.cc make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_aobasis.dir/DependInfo.cmake --color= +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_aomatrix.dir/DependInfo.cmake --color= make -f xtp/src/tools/CMakeFiles/xtp_map.dir/build.make xtp/src/tools/CMakeFiles/xtp_map.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make -f xtp/src/tools/CMakeFiles/xtp_run.dir/build.make xtp/src/tools/CMakeFiles/xtp_run.dir/build -[ 69%] Building CXX object xtp/src/tools/CMakeFiles/xtp_parallel.dir/xtp_parallel.cc.o make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make -f xtp/src/tools/CMakeFiles/xtp_tools.dir/build.make xtp/src/tools/CMakeFiles/xtp_tools.dir/build -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tools && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tools/CMakeFiles/xtp_parallel.dir/xtp_parallel.cc.o -MF CMakeFiles/xtp_parallel.dir/xtp_parallel.cc.o.d -o CMakeFiles/xtp_parallel.dir/xtp_parallel.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tools/xtp_parallel.cc make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make -f xtp/src/tests/CMakeFiles/unit_test_adiis.dir/build.make xtp/src/tests/CMakeFiles/unit_test_adiis.dir/build +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' [ 69%] Building CXX object xtp/src/tools/CMakeFiles/xtp_map.dir/xtp_map.cc.o -make -f xtp/src/tests/CMakeFiles/unit_test_aomatrix.dir/build.make xtp/src/tests/CMakeFiles/unit_test_aomatrix.dir/depend +make -f xtp/src/tests/CMakeFiles/unit_test_aobasis.dir/build.make xtp/src/tests/CMakeFiles/unit_test_aobasis.dir/build +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tools && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tools/CMakeFiles/xtp_map.dir/xtp_map.cc.o -MF CMakeFiles/xtp_map.dir/xtp_map.cc.o.d -o CMakeFiles/xtp_map.dir/xtp_map.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tools/xtp_map.cc make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f xtp/src/tests/CMakeFiles/unit_test_aomatrix.dir/build.make xtp/src/tests/CMakeFiles/unit_test_aomatrix.dir/build +[ 69%] Building CXX object xtp/src/tools/CMakeFiles/xtp_run.dir/xtp_run.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tools && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tools/CMakeFiles/xtp_run.dir/xtp_run.cc.o -MF CMakeFiles/xtp_run.dir/xtp_run.cc.o.d -o CMakeFiles/xtp_run.dir/xtp_run.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tools/xtp_run.cc make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_aomatrix.dir/DependInfo.cmake --color= +[ 69%] Building CXX object xtp/src/tools/CMakeFiles/xtp_tools.dir/xtp_tools.cc.o make -f xtp/src/tests/CMakeFiles/unit_test_aomatrix3d.dir/build.make xtp/src/tests/CMakeFiles/unit_test_aomatrix3d.dir/depend +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tools && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tools/CMakeFiles/xtp_tools.dir/xtp_tools.cc.o -MF CMakeFiles/xtp_tools.dir/xtp_tools.cc.o.d -o CMakeFiles/xtp_tools.dir/xtp_tools.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tools/xtp_tools.cc make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 69%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_adiis.dir/test_adiis.cc.o make -f xtp/src/tests/CMakeFiles/unit_test_aotransform.dir/build.make xtp/src/tests/CMakeFiles/unit_test_aotransform.dir/depend cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_aomatrix3d.dir/DependInfo.cmake --color= -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tools && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tools/CMakeFiles/xtp_map.dir/xtp_map.cc.o -MF CMakeFiles/xtp_map.dir/xtp_map.cc.o.d -o CMakeFiles/xtp_map.dir/xtp_map.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tools/xtp_map.cc -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_aotransform.dir/DependInfo.cmake --color= -make -f xtp/src/tests/CMakeFiles/unit_test_aobasis.dir/build.make xtp/src/tests/CMakeFiles/unit_test_aobasis.dir/build -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_adiis.dir/test_adiis.cc.o -MF CMakeFiles/unit_test_adiis.dir/test_adiis.cc.o.d -o CMakeFiles/unit_test_adiis.dir/test_adiis.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_adiis.cc make -f xtp/src/tests/CMakeFiles/unit_test_aopotential.dir/build.make xtp/src/tests/CMakeFiles/unit_test_aopotential.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_aotransform.dir/DependInfo.cmake --color= +[ 69%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_aobasis.dir/test_aobasis.cc.o make -f xtp/src/tests/CMakeFiles/unit_test_atom.dir/build.make xtp/src/tests/CMakeFiles/unit_test_atom.dir/depend -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_aopotential.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_aopotential.dir/DependInfo.cmake --color= +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_aobasis.dir/test_aobasis.cc.o -MF CMakeFiles/unit_test_aobasis.dir/test_aobasis.cc.o.d -o CMakeFiles/unit_test_aobasis.dir/test_aobasis.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_aobasis.cc make -f xtp/src/tests/CMakeFiles/unit_test_qmatom.dir/build.make xtp/src/tests/CMakeFiles/unit_test_qmatom.dir/depend +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_atom.dir/DependInfo.cmake --color= +[ 71%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_aomatrix.dir/test_aomatrix.cc.o make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/src/tests/CMakeFiles/unit_test_polarsegment.dir/build.make xtp/src/tests/CMakeFiles/unit_test_polarsegment.dir/depend cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_qmatom.dir/DependInfo.cmake --color= -[ 69%] Building CXX object xtp/src/tools/CMakeFiles/xtp_run.dir/xtp_run.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tools && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tools/CMakeFiles/xtp_run.dir/xtp_run.cc.o -MF CMakeFiles/xtp_run.dir/xtp_run.cc.o.d -o CMakeFiles/xtp_run.dir/xtp_run.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tools/xtp_run.cc +make -f xtp/src/tests/CMakeFiles/unit_test_polarsegment.dir/build.make xtp/src/tests/CMakeFiles/unit_test_polarsegment.dir/depend +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_aomatrix.dir/test_aomatrix.cc.o -MF CMakeFiles/unit_test_aomatrix.dir/test_aomatrix.cc.o.d -o CMakeFiles/unit_test_aomatrix.dir/test_aomatrix.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_aomatrix.cc +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_polarsegment.dir/DependInfo.cmake --color= -[ 69%] Building CXX object xtp/src/tools/CMakeFiles/xtp_tools.dir/xtp_tools.cc.o -make -f xtp/src/tests/CMakeFiles/unit_test_qmmolecule.dir/build.make xtp/src/tests/CMakeFiles/unit_test_qmmolecule.dir/depend -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tools && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tools/CMakeFiles/xtp_tools.dir/xtp_tools.cc.o -MF CMakeFiles/xtp_tools.dir/xtp_tools.cc.o.d -o CMakeFiles/xtp_tools.dir/xtp_tools.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tools/xtp_tools.cc -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 69%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_adiis.dir/test_adiis.cc.o -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_adiis.dir/test_adiis.cc.o -MF CMakeFiles/unit_test_adiis.dir/test_adiis.cc.o.d -o CMakeFiles/unit_test_adiis.dir/test_adiis.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_adiis.cc make -f xtp/src/tests/CMakeFiles/unit_test_aomatrix3d.dir/build.make xtp/src/tests/CMakeFiles/unit_test_aomatrix3d.dir/build -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_qmmolecule.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/src/tests/CMakeFiles/unit_test_aomatrix.dir/build.make xtp/src/tests/CMakeFiles/unit_test_aomatrix.dir/build +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f xtp/src/tests/CMakeFiles/unit_test_aotransform.dir/build.make xtp/src/tests/CMakeFiles/unit_test_aotransform.dir/build make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make -f xtp/src/tests/CMakeFiles/unit_test_atom.dir/build.make xtp/src/tests/CMakeFiles/unit_test_atom.dir/build make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 69%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_aobasis.dir/test_aobasis.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_aobasis.dir/test_aobasis.cc.o -MF CMakeFiles/unit_test_aobasis.dir/test_aobasis.cc.o.d -o CMakeFiles/unit_test_aobasis.dir/test_aobasis.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_aobasis.cc -make -f xtp/src/tests/CMakeFiles/unit_test_aotransform.dir/build.make xtp/src/tests/CMakeFiles/unit_test_aotransform.dir/build -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make -f xtp/src/tests/CMakeFiles/unit_test_aopotential.dir/build.make xtp/src/tests/CMakeFiles/unit_test_aopotential.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make -f xtp/src/tests/CMakeFiles/unit_test_qmatom.dir/build.make xtp/src/tests/CMakeFiles/unit_test_qmatom.dir/build -[ 71%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_aomatrix.dir/test_aomatrix.cc.o make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_aomatrix.dir/test_aomatrix.cc.o -MF CMakeFiles/unit_test_aomatrix.dir/test_aomatrix.cc.o.d -o CMakeFiles/unit_test_aomatrix.dir/test_aomatrix.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_aomatrix.cc +[ 72%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_aotransform.dir/test_aotransform.cc.o make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make -f xtp/src/tests/CMakeFiles/unit_test_polarsegment.dir/build.make xtp/src/tests/CMakeFiles/unit_test_polarsegment.dir/build -[ 71%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_aomatrix3d.dir/test_aomatrix3d.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_aotransform.dir/test_aotransform.cc.o -MF CMakeFiles/unit_test_aotransform.dir/test_aotransform.cc.o.d -o CMakeFiles/unit_test_aotransform.dir/test_aotransform.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_aotransform.cc make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/src/tests/CMakeFiles/unit_test_qmmolecule.dir/build.make xtp/src/tests/CMakeFiles/unit_test_qmmolecule.dir/build -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_aomatrix3d.dir/test_aomatrix3d.cc.o -MF CMakeFiles/unit_test_aomatrix3d.dir/test_aomatrix3d.cc.o.d -o CMakeFiles/unit_test_aomatrix3d.dir/test_aomatrix3d.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_aomatrix3d.cc -[ 71%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_atom.dir/test_atom.cc.o -[ 72%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_aotransform.dir/test_aotransform.cc.o +[ 72%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_atom.dir/test_atom.cc.o +make -f xtp/src/tests/CMakeFiles/unit_test_qmmolecule.dir/build.make xtp/src/tests/CMakeFiles/unit_test_qmmolecule.dir/depend +[ 72%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_aomatrix3d.dir/test_aomatrix3d.cc.o cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_atom.dir/test_atom.cc.o -MF CMakeFiles/unit_test_atom.dir/test_atom.cc.o.d -o CMakeFiles/unit_test_atom.dir/test_atom.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_atom.cc make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_qmmolecule.dir/DependInfo.cmake --color= +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_aomatrix3d.dir/test_aomatrix3d.cc.o -MF CMakeFiles/unit_test_aomatrix3d.dir/test_aomatrix3d.cc.o.d -o CMakeFiles/unit_test_aomatrix3d.dir/test_aomatrix3d.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_aomatrix3d.cc make -f xtp/src/tests/CMakeFiles/unit_test_basisset.dir/build.make xtp/src/tests/CMakeFiles/unit_test_basisset.dir/depend -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_aotransform.dir/test_aotransform.cc.o -MF CMakeFiles/unit_test_aotransform.dir/test_aotransform.cc.o.d -o CMakeFiles/unit_test_aotransform.dir/test_aotransform.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_aotransform.cc [ 72%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_aopotential.dir/test_aopotential.cc.o -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_basisset.dir/DependInfo.cmake --color= -make -f xtp/src/tests/CMakeFiles/unit_test_bseoperator_btda.dir/build.make xtp/src/tests/CMakeFiles/unit_test_bseoperator_btda.dir/depend cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_aopotential.dir/test_aopotential.cc.o -MF CMakeFiles/unit_test_aopotential.dir/test_aopotential.cc.o.d -o CMakeFiles/unit_test_aopotential.dir/test_aopotential.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_aopotential.cc -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_bseoperator_btda.dir/DependInfo.cmake --color= [ 72%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_qmatom.dir/test_qmatom.cc.o cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_qmatom.dir/test_qmatom.cc.o -MF CMakeFiles/unit_test_qmatom.dir/test_qmatom.cc.o.d -o CMakeFiles/unit_test_qmatom.dir/test_qmatom.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_qmatom.cc +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_basisset.dir/DependInfo.cmake --color= +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f xtp/src/tests/CMakeFiles/unit_test_qmmolecule.dir/build.make xtp/src/tests/CMakeFiles/unit_test_qmmolecule.dir/build [ 72%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_polarsegment.dir/test_polarsegment.cc.o cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_polarsegment.dir/test_polarsegment.cc.o -MF CMakeFiles/unit_test_polarsegment.dir/test_polarsegment.cc.o.d -o CMakeFiles/unit_test_polarsegment.dir/test_polarsegment.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_polarsegment.cc -[ 72%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_qmmolecule.dir/test_qmmolecule.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_qmmolecule.dir/test_qmmolecule.cc.o -MF CMakeFiles/unit_test_qmmolecule.dir/test_qmmolecule.cc.o.d -o CMakeFiles/unit_test_qmmolecule.dir/test_qmmolecule.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_qmmolecule.cc -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/src/tests/CMakeFiles/unit_test_basisset.dir/build.make xtp/src/tests/CMakeFiles/unit_test_basisset.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/src/tests/CMakeFiles/unit_test_bseoperator_btda.dir/build.make xtp/src/tests/CMakeFiles/unit_test_bseoperator_btda.dir/build +make -f xtp/src/tests/CMakeFiles/unit_test_basisset.dir/build.make xtp/src/tests/CMakeFiles/unit_test_basisset.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 72%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_qmmolecule.dir/test_qmmolecule.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_qmmolecule.dir/test_qmmolecule.cc.o -MF CMakeFiles/unit_test_qmmolecule.dir/test_qmmolecule.cc.o.d -o CMakeFiles/unit_test_qmmolecule.dir/test_qmmolecule.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_qmmolecule.cc [ 72%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_basisset.dir/test_basisset.cc.o cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_basisset.dir/test_basisset.cc.o -MF CMakeFiles/unit_test_basisset.dir/test_basisset.cc.o.d -o CMakeFiles/unit_test_basisset.dir/test_basisset.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_basisset.cc -[ 72%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_bseoperator_btda.dir/test_bseoperator_btda.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_bseoperator_btda.dir/test_bseoperator_btda.cc.o -MF CMakeFiles/unit_test_bseoperator_btda.dir/test_bseoperator_btda.cc.o.d -o CMakeFiles/unit_test_bseoperator_btda.dir/test_bseoperator_btda.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_bseoperator_btda.cc In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:34, @@ -16015,6 +16043,20 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ +In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:34, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/qmmolecule.h:25, + from /build/reproducible-path/votca-2022.1/xtp/src/tests/test_qmmolecule.cc:24: +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 81 | loc_ = loc; + | ^~~ +In file included from /usr/include/hdf5/serial/H5Cpp.h:47, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:25: +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] @@ -16059,8 +16101,12 @@ In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:34, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/qmmolecule.h:25, - from /build/reproducible-path/votca-2022.1/xtp/src/tests/test_qmmolecule.cc:24: + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/segment.h:30, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/qmpair.h:32, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/qmnblist.h:30, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/topology.h:31, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/stateapplication.h:26, + from /build/reproducible-path/votca-2022.1/xtp/src/tools/xtp_run.cc:23: /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; @@ -16111,6 +16157,61 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ +In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:31: +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 178 | attr = loc.createAttribute(name, *strType, dp); + | ^ +In file included from /usr/include/hdf5/serial/H5Cpp.h:34: +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 180 | attr = loc.openAttribute(name); + | ^ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 278 | parent = loc.createGroup(name); + | ^ +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 280 | parent = loc.openGroup(name); + | ^ +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 294 | parent = loc.createGroup(name); + | ^ +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 296 | parent = loc.openGroup(name); + | ^ +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 162 | attr = loc.createAttribute(name, *dataType, dp); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 164 | attr = loc.openAttribute(name); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] @@ -16146,8 +16247,8 @@ from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/qmpair.h:32, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/qmnblist.h:30, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/topology.h:31, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/stateapplication.h:26, - from /build/reproducible-path/votca-2022.1/xtp/src/tools/xtp_run.cc:23: + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/jobcalculator.h:32, + from /build/reproducible-path/votca-2022.1/xtp/src/tools/xtp_parallel.cc:21: /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; @@ -16198,9 +16299,15 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::PolarSite; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::PolarSite]' -/build/reproducible-path/votca-2022.1/xtp/src/tests/test_polarsegment.cc:161:17: required from here +[ 72%] Linking CXX executable xtp_tools +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/xtp_tools.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/xtp_tools.dir/xtp_tools.cc.o -o xtp_tools -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial: ../libxtp/libvotca_xtp.so.2022 ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm +[ 72%] Linking CXX executable unit_test_qmatom +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_qmatom.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_qmatom.dir/test_qmatom.cc.o -o unit_test_qmatom -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' +/build/reproducible-path/votca-2022.1/xtp/src/tests/test_qmmolecule.cc:90:17: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ @@ -16234,65 +16341,9 @@ /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -[ 72%] Linking CXX executable unit_test_adiis -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_adiis.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_adiis.dir/test_adiis.cc.o -o unit_test_adiis -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so -In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:34, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/segment.h:30, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/qmpair.h:32, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/qmnblist.h:30, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/topology.h:31, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/jobcalculator.h:32, - from /build/reproducible-path/votca-2022.1/xtp/src/tools/xtp_parallel.cc:21: -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 81 | loc_ = loc; - | ^~~ -In file included from /usr/include/hdf5/serial/H5Cpp.h:47, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:25: -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::PolarSite]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::PolarSite; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::PolarSite]' /build/reproducible-path/votca-2022.1/xtp/src/tests/test_polarsegment.cc:161:17: required from here -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 162 | attr = loc.createAttribute(name, *dataType, dp); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 164 | attr = loc.openAttribute(name); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:31: -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 178 | attr = loc.createAttribute(name, *strType, dp); - | ^ -In file included from /usr/include/hdf5/serial/H5Cpp.h:34: -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 180 | attr = loc.openAttribute(name); - | ^ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 278 | parent = loc.createGroup(name); - | ^ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' -/build/reproducible-path/votca-2022.1/xtp/src/tests/test_qmmolecule.cc:90:17: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ @@ -16326,28 +16377,6 @@ /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 280 | parent = loc.openGroup(name); - | ^ -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 294 | parent = loc.createGroup(name); - | ^ -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 296 | parent = loc.openGroup(name); - | ^ -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] @@ -16378,15 +16407,10 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 72%] Built target unit_test_adiis -make -f xtp/src/tests/CMakeFiles/unit_test_bfgs_trm.dir/build.make xtp/src/tests/CMakeFiles/unit_test_bfgs_trm.dir/depend -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_bfgs_trm.dir/DependInfo.cmake --color= -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/src/tests/CMakeFiles/unit_test_bfgs_trm.dir/build.make xtp/src/tests/CMakeFiles/unit_test_bfgs_trm.dir/build -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::PolarSite]' +/build/reproducible-path/votca-2022.1/xtp/src/tests/test_polarsegment.cc:161:17: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -16399,14 +16423,18 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 72%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_bfgs_trm.dir/test_bfgs_trm.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_bfgs_trm.dir/test_bfgs_trm.cc.o -MF CMakeFiles/unit_test_bfgs_trm.dir/test_bfgs_trm.cc.o.d -o CMakeFiles/unit_test_bfgs_trm.dir/test_bfgs_trm.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_bfgs_trm.cc -[ 72%] Linking CXX executable xtp_tools +[ 72%] Linking CXX executable unit_test_adiis +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_adiis.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_adiis.dir/test_adiis.cc.o -o unit_test_adiis -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/orbitals.h:31, - from /build/reproducible-path/votca-2022.1/xtp/src/tests/test_basisset.cc:31: + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:34, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/segment.h:30, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/qmpair.h:32, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/qmnblist.h:30, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/topology.h:31, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/md2qmengine.h:26, + from /build/reproducible-path/votca-2022.1/xtp/src/tools/xtp_map.cc:34: /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; @@ -16416,8 +16444,17 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/xtp_tools.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/xtp_tools.dir/xtp_tools.cc.o -o xtp_tools -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial: ../libxtp/libvotca_xtp.so.2022 ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 72%] Linking CXX executable unit_test_atom +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_atom.dir/link.txt --verbose=1 +[ 72%] Built target xtp_tools +make -f xtp/src/tests/CMakeFiles/unit_test_bseoperator_btda.dir/build.make xtp/src/tests/CMakeFiles/unit_test_bseoperator_btda.dir/depend +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_bseoperator_btda.dir/DependInfo.cmake --color= +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_atom.dir/test_atom.cc.o -o unit_test_atom -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f xtp/src/tests/CMakeFiles/unit_test_bseoperator_btda.dir/build.make xtp/src/tests/CMakeFiles/unit_test_bseoperator_btda.dir/build +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] @@ -16433,6 +16470,7 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ +[ 72%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_bseoperator_btda.dir/test_bseoperator_btda.cc.o /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); @@ -16459,24 +16497,17 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ -In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:34, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/segment.h:30, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/qmpair.h:32, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/qmnblist.h:30, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/topology.h:31, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/md2qmengine.h:26, - from /build/reproducible-path/votca-2022.1/xtp/src/tools/xtp_map.cc:34: -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 81 | loc_ = loc; - | ^~~ -In file included from /usr/include/hdf5/serial/H5Cpp.h:47, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:25: -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_bseoperator_btda.dir/test_bseoperator_btda.cc.o -MF CMakeFiles/unit_test_bseoperator_btda.dir/test_bseoperator_btda.cc.o.d -o CMakeFiles/unit_test_bseoperator_btda.dir/test_bseoperator_btda.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_bseoperator_btda.cc +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 72%] Built target unit_test_qmatom +make -f xtp/src/tests/CMakeFiles/unit_test_bfgs_trm.dir/build.make xtp/src/tests/CMakeFiles/unit_test_bfgs_trm.dir/depend +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_bfgs_trm.dir/DependInfo.cmake --color= +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f xtp/src/tests/CMakeFiles/unit_test_bfgs_trm.dir/build.make xtp/src/tests/CMakeFiles/unit_test_bfgs_trm.dir/build +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 72%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_bfgs_trm.dir/test_bfgs_trm.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_bfgs_trm.dir/test_bfgs_trm.cc.o -MF CMakeFiles/unit_test_bfgs_trm.dir/test_bfgs_trm.cc.o.d -o CMakeFiles/unit_test_bfgs_trm.dir/test_bfgs_trm.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_bfgs_trm.cc /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::Atom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::Atom]' /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here @@ -16513,6 +16544,8 @@ /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 72%] Built target unit_test_adiis /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::Atom]' @@ -16529,11 +16562,64 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ +make -f xtp/src/tests/CMakeFiles/unit_test_bse.dir/build.make xtp/src/tests/CMakeFiles/unit_test_bse.dir/depend +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_bse.dir/DependInfo.cmake --color= +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f xtp/src/tests/CMakeFiles/unit_test_bse.dir/build.make xtp/src/tests/CMakeFiles/unit_test_bse.dir/build +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 72%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_bse.dir/test_bse.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_bse.dir/test_bse.cc.o -MF CMakeFiles/unit_test_bse.dir/test_bse.cc.o.d -o CMakeFiles/unit_test_bse.dir/test_bse.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_bse.cc +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 72%] Built target unit_test_atom +make -f xtp/src/tests/CMakeFiles/unit_test_convergenceacc.dir/build.make xtp/src/tests/CMakeFiles/unit_test_convergenceacc.dir/depend +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_convergenceacc.dir/DependInfo.cmake --color= +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 162 | attr = loc.createAttribute(name, *dataType, dp); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 164 | attr = loc.openAttribute(name); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f xtp/src/tests/CMakeFiles/unit_test_convergenceacc.dir/build.make xtp/src/tests/CMakeFiles/unit_test_convergenceacc.dir/build +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 72%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_convergenceacc.dir/test_convergenceacc.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_convergenceacc.dir/test_convergenceacc.cc.o -MF CMakeFiles/unit_test_convergenceacc.dir/test_convergenceacc.cc.o.d -o CMakeFiles/unit_test_convergenceacc.dir/test_convergenceacc.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_convergenceacc.cc +In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/orbitals.h:31, + from /build/reproducible-path/votca-2022.1/xtp/src/tests/test_aobasis.cc:32: +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 81 | loc_ = loc; + | ^~~ +In file included from /usr/include/hdf5/serial/H5Cpp.h:47, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:25: +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ +In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/orbitals.h:31, + from /build/reproducible-path/votca-2022.1/xtp/src/tests/test_aomatrix.cc:26: +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 81 | loc_ = loc; + | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:34: /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); @@ -16544,20 +16630,11 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 162 | attr = loc.createAttribute(name, *dataType, dp); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 164 | attr = loc.openAttribute(name); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ +In file included from /usr/include/hdf5/serial/H5Cpp.h:47, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:25: +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); @@ -16571,6 +16648,19 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ +In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/orbitals.h:31, + from /build/reproducible-path/votca-2022.1/xtp/src/tests/test_aomatrix3d.cc:26: +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 81 | loc_ = loc; + | ^~~ +In file included from /usr/include/hdf5/serial/H5Cpp.h:47, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:25: +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); @@ -16584,35 +16674,6 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 72%] Built target xtp_tools -make -f xtp/src/tests/CMakeFiles/unit_test_bse.dir/build.make xtp/src/tests/CMakeFiles/unit_test_bse.dir/depend -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_bse.dir/DependInfo.cmake --color= -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/src/tests/CMakeFiles/unit_test_bse.dir/build.make xtp/src/tests/CMakeFiles/unit_test_bse.dir/build -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 72%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_bse.dir/test_bse.cc.o -[ 72%] Linking CXX executable unit_test_qmatom -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_qmatom.dir/link.txt --verbose=1 -[ 72%] Linking CXX executable unit_test_atom -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_bse.dir/test_bse.cc.o -MF CMakeFiles/unit_test_bse.dir/test_bse.cc.o.d -o CMakeFiles/unit_test_bse.dir/test_bse.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_bse.cc -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_atom.dir/link.txt --verbose=1 -In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/orbitals.h:31, - from /build/reproducible-path/votca-2022.1/xtp/src/tests/test_aomatrix.cc:26: -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 81 | loc_ = loc; - | ^~~ -In file included from /usr/include/hdf5/serial/H5Cpp.h:47, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:25: -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_qmatom.dir/test_qmatom.cc.o -o unit_test_qmatom -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_atom.dir/test_atom.cc.o -o unit_test_atom -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] @@ -16645,6 +16706,11 @@ /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ +In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:31: +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 178 | attr = loc.createAttribute(name, *strType, dp); + | ^ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ @@ -16654,24 +16720,46 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 162 | attr = loc.createAttribute(name, *dataType, dp); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +In file included from /usr/include/hdf5/serial/H5Cpp.h:34: /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 164 | attr = loc.openAttribute(name); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 180 | attr = loc.openAttribute(name); + | ^ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 278 | parent = loc.createGroup(name); + | ^ +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 280 | parent = loc.openGroup(name); + | ^ +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 294 | parent = loc.createGroup(name); + | ^ +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 296 | parent = loc.openGroup(name); + | ^ +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/orbitals.h:31, - from /build/reproducible-path/votca-2022.1/xtp/src/tests/test_aobasis.cc:32: + from /build/reproducible-path/votca-2022.1/xtp/src/tests/test_aotransform.cc:27: /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; @@ -16681,21 +16769,6 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ -In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:31: -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 178 | attr = loc.createAttribute(name, *strType, dp); - | ^ -In file included from /usr/include/hdf5/serial/H5Cpp.h:34: -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 180 | attr = loc.openAttribute(name); - | ^ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::Atom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::Atom]' /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here @@ -16732,6 +16805,37 @@ /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:31: +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 178 | attr = loc.createAttribute(name, *strType, dp); + | ^ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::Atom]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 162 | attr = loc.createAttribute(name, *dataType, dp); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +In file included from /usr/include/hdf5/serial/H5Cpp.h:34: +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 180 | attr = loc.openAttribute(name); + | ^ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 164 | attr = loc.openAttribute(name); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); @@ -16758,10 +16862,22 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::Atom]' -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 162 | attr = loc.createAttribute(name, *dataType, dp); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 164 | attr = loc.openAttribute(name); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -16774,26 +16890,6 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 72%] Built target unit_test_qmatom -make -f xtp/src/tests/CMakeFiles/unit_test_convergenceacc.dir/build.make xtp/src/tests/CMakeFiles/unit_test_convergenceacc.dir/depend -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_convergenceacc.dir/DependInfo.cmake --color= -[ 72%] Built target unit_test_atom -make -f xtp/src/tests/CMakeFiles/unit_test_dftcoupling.dir/build.make xtp/src/tests/CMakeFiles/unit_test_dftcoupling.dir/depend -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_dftcoupling.dir/DependInfo.cmake --color= -make -f xtp/src/tests/CMakeFiles/unit_test_convergenceacc.dir/build.make xtp/src/tests/CMakeFiles/unit_test_convergenceacc.dir/build -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/src/tests/CMakeFiles/unit_test_dftcoupling.dir/build.make xtp/src/tests/CMakeFiles/unit_test_dftcoupling.dir/build -[ 72%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_convergenceacc.dir/test_convergenceacc.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_convergenceacc.dir/test_convergenceacc.cc.o -MF CMakeFiles/unit_test_convergenceacc.dir/test_convergenceacc.cc.o.d -o CMakeFiles/unit_test_convergenceacc.dir/test_convergenceacc.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_convergenceacc.cc -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 72%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_dftcoupling.dir/test_dftcoupling.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_dftcoupling.dir/test_dftcoupling.cc.o -MF CMakeFiles/unit_test_dftcoupling.dir/test_dftcoupling.cc.o.d -o CMakeFiles/unit_test_dftcoupling.dir/test_dftcoupling.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_dftcoupling.cc /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] @@ -16822,60 +16918,6 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ -In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/orbitals.h:31, - from /build/reproducible-path/votca-2022.1/xtp/src/tests/test_aotransform.cc:27: -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 81 | loc_ = loc; - | ^~~ -In file included from /usr/include/hdf5/serial/H5Cpp.h:47, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:25: -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ -In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:31: -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 178 | attr = loc.createAttribute(name, *strType, dp); - | ^ -In file included from /usr/include/hdf5/serial/H5Cpp.h:34: -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 180 | attr = loc.openAttribute(name); - | ^ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 278 | parent = loc.createGroup(name); - | ^ -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 280 | parent = loc.openGroup(name); - | ^ -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 294 | parent = loc.createGroup(name); - | ^ -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 296 | parent = loc.openGroup(name); - | ^ -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] @@ -16917,20 +16959,6 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 162 | attr = loc.createAttribute(name, *dataType, dp); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 164 | attr = loc.openAttribute(name); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::Atom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::Atom]' /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here @@ -16983,9 +17011,6 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ -[ 72%] Linking CXX executable xtp_run -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/xtp_run.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/xtp_run.dir/xtp_run.cc.o -o xtp_run -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial: ../libxtp/libvotca_xtp.so.2022 ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] @@ -17000,10 +17025,13 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ +[ 72%] Linking CXX executable xtp_run +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/xtp_run.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/xtp_run.dir/xtp_run.cc.o -o xtp_run -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial: ../libxtp/libvotca_xtp.so.2022 ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/orbitals.h:31, - from /build/reproducible-path/votca-2022.1/xtp/src/tests/test_aomatrix3d.cc:26: + from /build/reproducible-path/votca-2022.1/xtp/src/tests/test_basisset.cc:31: /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; @@ -17054,6 +17082,44 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 72%] Built target xtp_run +make -f xtp/src/tests/CMakeFiles/unit_test_dftcoupling.dir/build.make xtp/src/tests/CMakeFiles/unit_test_dftcoupling.dir/depend +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_dftcoupling.dir/DependInfo.cmake --color= +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f xtp/src/tests/CMakeFiles/unit_test_dftcoupling.dir/build.make xtp/src/tests/CMakeFiles/unit_test_dftcoupling.dir/build +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 72%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_dftcoupling.dir/test_dftcoupling.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_dftcoupling.dir/test_dftcoupling.cc.o -MF CMakeFiles/unit_test_dftcoupling.dir/test_dftcoupling.cc.o.d -o CMakeFiles/unit_test_dftcoupling.dir/test_dftcoupling.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_dftcoupling.cc +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 162 | attr = loc.createAttribute(name, *dataType, dp); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 164 | attr = loc.openAttribute(name); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 162 | attr = loc.createAttribute(name, *dataType, dp); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 164 | attr = loc.openAttribute(name); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here @@ -17106,44 +17172,6 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 72%] Built target xtp_run -make -f xtp/src/tests/CMakeFiles/unit_test_diis.dir/build.make xtp/src/tests/CMakeFiles/unit_test_diis.dir/depend -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_diis.dir/DependInfo.cmake --color= -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/src/tests/CMakeFiles/unit_test_diis.dir/build.make xtp/src/tests/CMakeFiles/unit_test_diis.dir/build -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 72%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_diis.dir/test_diis.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_diis.dir/test_diis.cc.o -MF CMakeFiles/unit_test_diis.dir/test_diis.cc.o.d -o CMakeFiles/unit_test_diis.dir/test_diis.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_diis.cc -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 162 | attr = loc.createAttribute(name, *dataType, dp); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 164 | attr = loc.openAttribute(name); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 162 | attr = loc.createAttribute(name, *dataType, dp); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 164 | attr = loc.openAttribute(name); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here @@ -17300,9 +17328,6 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ -[ 72%] Linking CXX executable unit_test_basisset -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_basisset.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_basisset.dir/test_basisset.cc.o -o unit_test_basisset -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here @@ -17355,32 +17380,6 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 72%] Built target unit_test_basisset -make -f xtp/src/tests/CMakeFiles/unit_test_ecpaobasis.dir/build.make xtp/src/tests/CMakeFiles/unit_test_ecpaobasis.dir/depend -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_ecpaobasis.dir/DependInfo.cmake --color= -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/src/tests/CMakeFiles/unit_test_ecpaobasis.dir/build.make xtp/src/tests/CMakeFiles/unit_test_ecpaobasis.dir/build -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 72%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_ecpaobasis.dir/test_ecpaobasis.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_ecpaobasis.dir/test_ecpaobasis.cc.o -MF CMakeFiles/unit_test_ecpaobasis.dir/test_ecpaobasis.cc.o.d -o CMakeFiles/unit_test_ecpaobasis.dir/test_ecpaobasis.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_ecpaobasis.cc -[ 72%] Linking CXX executable xtp_parallel -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/xtp_parallel.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/xtp_parallel.dir/xtp_parallel.cc.o -o xtp_parallel -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial: ../libxtp/libvotca_xtp.so.2022 ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm -[ 72%] Linking CXX executable unit_test_qmmolecule -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_qmmolecule.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_qmmolecule.dir/test_qmmolecule.cc.o -o unit_test_qmmolecule -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 72%] Built target xtp_parallel -make -f xtp/src/tests/CMakeFiles/unit_test_eigen.dir/build.make xtp/src/tests/CMakeFiles/unit_test_eigen.dir/depend -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_eigen.dir/DependInfo.cmake --color= -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/src/tests/CMakeFiles/unit_test_eigen.dir/build.make xtp/src/tests/CMakeFiles/unit_test_eigen.dir/build -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 72%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_eigen.dir/test_eigen.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_eigen.dir/test_eigen.cc.o -MF CMakeFiles/unit_test_eigen.dir/test_eigen.cc.o.d -o CMakeFiles/unit_test_eigen.dir/test_eigen.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_eigen.cc /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::StaticSite; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::StaticSite]' /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here @@ -17433,84 +17432,40 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ +[ 72%] Linking CXX executable xtp_parallel +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/xtp_parallel.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/xtp_parallel.dir/xtp_parallel.cc.o -o xtp_parallel -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial: ../libxtp/libvotca_xtp.so.2022 ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm +[ 72%] Linking CXX executable unit_test_qmmolecule +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_qmmolecule.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_qmmolecule.dir/test_qmmolecule.cc.o -o unit_test_qmmolecule -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 72%] Built target xtp_parallel +make -f xtp/src/tests/CMakeFiles/unit_test_diis.dir/build.make xtp/src/tests/CMakeFiles/unit_test_diis.dir/depend +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_diis.dir/DependInfo.cmake --color= +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f xtp/src/tests/CMakeFiles/unit_test_diis.dir/build.make xtp/src/tests/CMakeFiles/unit_test_diis.dir/build +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 72%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_diis.dir/test_diis.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_diis.dir/test_diis.cc.o -MF CMakeFiles/unit_test_diis.dir/test_diis.cc.o.d -o CMakeFiles/unit_test_diis.dir/test_diis.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_diis.cc make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' [ 72%] Built target unit_test_qmmolecule -make -f xtp/src/tests/CMakeFiles/unit_test_eris.dir/build.make xtp/src/tests/CMakeFiles/unit_test_eris.dir/depend +make -f xtp/src/tests/CMakeFiles/unit_test_ecpaobasis.dir/build.make xtp/src/tests/CMakeFiles/unit_test_ecpaobasis.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_eris.dir/DependInfo.cmake --color= +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_ecpaobasis.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/src/tests/CMakeFiles/unit_test_eris.dir/build.make xtp/src/tests/CMakeFiles/unit_test_eris.dir/build +make -f xtp/src/tests/CMakeFiles/unit_test_ecpaobasis.dir/build.make xtp/src/tests/CMakeFiles/unit_test_ecpaobasis.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 72%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_eris.dir/test_eris.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_eris.dir/test_eris.cc.o -MF CMakeFiles/unit_test_eris.dir/test_eris.cc.o.d -o CMakeFiles/unit_test_eris.dir/test_eris.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_eris.cc +[ 72%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_ecpaobasis.dir/test_ecpaobasis.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_ecpaobasis.dir/test_ecpaobasis.cc.o -MF CMakeFiles/unit_test_ecpaobasis.dir/test_ecpaobasis.cc.o.d -o CMakeFiles/unit_test_ecpaobasis.dir/test_ecpaobasis.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_ecpaobasis.cc [ 72%] Linking CXX executable unit_test_aotransform cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_aotransform.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_aotransform.dir/test_aotransform.cc.o -o unit_test_aotransform -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' [ 72%] Built target unit_test_aotransform -make -f xtp/src/tests/CMakeFiles/unit_test_espfit.dir/build.make xtp/src/tests/CMakeFiles/unit_test_espfit.dir/depend -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_espfit.dir/DependInfo.cmake --color= -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/src/tests/CMakeFiles/unit_test_espfit.dir/build.make xtp/src/tests/CMakeFiles/unit_test_espfit.dir/build +make -f xtp/src/tests/CMakeFiles/unit_test_eigen.dir/build.make xtp/src/tests/CMakeFiles/unit_test_eigen.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 72%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_espfit.dir/test_espfit.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_espfit.dir/test_espfit.cc.o -MF CMakeFiles/unit_test_espfit.dir/test_espfit.cc.o.d -o CMakeFiles/unit_test_espfit.dir/test_espfit.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_espfit.cc -In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/ecpaobasis.h:24, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/aopotential.h:26, - from /build/reproducible-path/votca-2022.1/xtp/src/tests/test_convergenceacc.cc:28: -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 81 | loc_ = loc; - | ^~~ -In file included from /usr/include/hdf5/serial/H5Cpp.h:47, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:25: -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ -In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:31: -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 178 | attr = loc.createAttribute(name, *strType, dp); - | ^ -In file included from /usr/include/hdf5/serial/H5Cpp.h:34: -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 180 | attr = loc.openAttribute(name); - | ^ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 278 | parent = loc.createGroup(name); - | ^ -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 280 | parent = loc.openGroup(name); - | ^ -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 294 | parent = loc.createGroup(name); - | ^ -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 296 | parent = loc.openGroup(name); - | ^ -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_eigen.dir/DependInfo.cmake --color= In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/orbitals.h:31, @@ -17525,6 +17480,11 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f xtp/src/tests/CMakeFiles/unit_test_eigen.dir/build.make xtp/src/tests/CMakeFiles/unit_test_eigen.dir/build +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 72%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_eigen.dir/test_eigen.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_eigen.dir/test_eigen.cc.o -MF CMakeFiles/unit_test_eigen.dir/test_eigen.cc.o.d -o CMakeFiles/unit_test_eigen.dir/test_eigen.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_eigen.cc In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] @@ -17566,30 +17526,24 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ -[ 72%] Linking CXX executable unit_test_polarsegment -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_polarsegment.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_polarsegment.dir/test_polarsegment.cc.o -o unit_test_polarsegment -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 162 | attr = loc.createAttribute(name, *dataType, dp); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 164 | attr = loc.openAttribute(name); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ +[ 72%] Linking CXX executable unit_test_basisset +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_basisset.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_basisset.dir/test_basisset.cc.o -o unit_test_basisset -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 72%] Built target unit_test_basisset +make -f xtp/src/tests/CMakeFiles/unit_test_eris.dir/build.make xtp/src/tests/CMakeFiles/unit_test_eris.dir/depend +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_eris.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f xtp/src/tests/CMakeFiles/unit_test_eris.dir/build.make xtp/src/tests/CMakeFiles/unit_test_eris.dir/build +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 72%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_eris.dir/test_eris.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_eris.dir/test_eris.cc.o -MF CMakeFiles/unit_test_eris.dir/test_eris.cc.o.d -o CMakeFiles/unit_test_eris.dir/test_eris.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_eris.cc In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/orbitals.h:31, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/couplingbase.h:29, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/dftcoupling.h:25, - from /build/reproducible-path/votca-2022.1/xtp/src/tests/test_dftcoupling.cc:24: + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/ecpaobasis.h:24, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/aopotential.h:26, + from /build/reproducible-path/votca-2022.1/xtp/src/tests/test_convergenceacc.cc:28: /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; @@ -17599,13 +17553,6 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ -[ 72%] Linking CXX executable unit_test_bseoperator_btda -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_bseoperator_btda.dir/link.txt --verbose=1 -[ 72%] Built target unit_test_polarsegment -make -f xtp/src/tests/CMakeFiles/unit_test_glink.dir/build.make xtp/src/tests/CMakeFiles/unit_test_glink.dir/depend -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_glink.dir/DependInfo.cmake --color= -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_bseoperator_btda.dir/test_bseoperator_btda.cc.o -o unit_test_bseoperator_btda -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] @@ -17647,11 +17594,6 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/src/tests/CMakeFiles/unit_test_glink.dir/build.make xtp/src/tests/CMakeFiles/unit_test_glink.dir/build -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 72%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_glink.dir/test_glink.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_glink.dir/test_glink.cc.o -MF CMakeFiles/unit_test_glink.dir/test_glink.cc.o.d -o CMakeFiles/unit_test_glink.dir/test_glink.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_glink.cc /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] @@ -17666,11 +17608,6 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 72%] Built target unit_test_bseoperator_btda -make -f xtp/src/tests/CMakeFiles/unit_test_hdf5.dir/build.make xtp/src/tests/CMakeFiles/unit_test_hdf5.dir/depend -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_hdf5.dir/DependInfo.cmake --color= /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = double; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = double; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/bse_population.h:50:6: required from here @@ -17686,11 +17623,6 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/src/tests/CMakeFiles/unit_test_hdf5.dir/build.make xtp/src/tests/CMakeFiles/unit_test_hdf5.dir/build -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 73%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_hdf5.dir/test_hdf5.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_hdf5.dir/test_hdf5.cc.o -MF CMakeFiles/unit_test_hdf5.dir/test_hdf5.cc.o.d -o CMakeFiles/unit_test_hdf5.dir/test_hdf5.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_hdf5.cc /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] @@ -17705,11 +17637,25 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ +[ 72%] Linking CXX executable unit_test_polarsegment +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_polarsegment.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_polarsegment.dir/test_polarsegment.cc.o -o unit_test_polarsegment -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 72%] Built target unit_test_polarsegment +make -f xtp/src/tests/CMakeFiles/unit_test_espfit.dir/build.make xtp/src/tests/CMakeFiles/unit_test_espfit.dir/depend +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_espfit.dir/DependInfo.cmake --color= +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f xtp/src/tests/CMakeFiles/unit_test_espfit.dir/build.make xtp/src/tests/CMakeFiles/unit_test_espfit.dir/build +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 72%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_espfit.dir/test_espfit.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_espfit.dir/test_espfit.cc.o -MF CMakeFiles/unit_test_espfit.dir/test_espfit.cc.o.d -o CMakeFiles/unit_test_espfit.dir/test_espfit.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_espfit.cc In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:34, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/qmmolecule.h:25, - from /build/reproducible-path/votca-2022.1/xtp/src/tests/test_ecpaobasis.cc:17: + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/orbitals.h:31, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/couplingbase.h:29, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/dftcoupling.h:25, + from /build/reproducible-path/votca-2022.1/xtp/src/tests/test_dftcoupling.cc:24: /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; @@ -17760,22 +17706,36 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ -[ 73%] Linking CXX executable unit_test_aobasis -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_aobasis.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_aobasis.dir/test_aobasis.cc.o -o unit_test_aobasis -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so -[ 73%] Linking CXX executable unit_test_aomatrix3d +[ 72%] Linking CXX executable unit_test_aomatrix3d cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_aomatrix3d.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_aomatrix3d.dir/test_aomatrix3d.cc.o -o unit_test_aomatrix3d -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 162 | attr = loc.createAttribute(name, *dataType, dp); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 164 | attr = loc.openAttribute(name); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 73%] Built target unit_test_aobasis -make -f xtp/src/tests/CMakeFiles/unit_test_cubefile_writer.dir/build.make xtp/src/tests/CMakeFiles/unit_test_cubefile_writer.dir/depend +[ 72%] Built target unit_test_aomatrix3d +make -f xtp/src/tests/CMakeFiles/unit_test_glink.dir/build.make xtp/src/tests/CMakeFiles/unit_test_glink.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_cubefile_writer.dir/DependInfo.cmake --color= +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_glink.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/src/tests/CMakeFiles/unit_test_cubefile_writer.dir/build.make xtp/src/tests/CMakeFiles/unit_test_cubefile_writer.dir/build +make -f xtp/src/tests/CMakeFiles/unit_test_glink.dir/build.make xtp/src/tests/CMakeFiles/unit_test_glink.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 73%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_cubefile_writer.dir/test_cubefile_writer.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_cubefile_writer.dir/test_cubefile_writer.cc.o -MF CMakeFiles/unit_test_cubefile_writer.dir/test_cubefile_writer.cc.o.d -o CMakeFiles/unit_test_cubefile_writer.dir/test_cubefile_writer.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_cubefile_writer.cc +[ 72%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_glink.dir/test_glink.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_glink.dir/test_glink.cc.o -MF CMakeFiles/unit_test_glink.dir/test_glink.cc.o.d -o CMakeFiles/unit_test_glink.dir/test_glink.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_glink.cc +[ 72%] Linking CXX executable unit_test_aobasis +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_aobasis.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_aobasis.dir/test_aobasis.cc.o -o unit_test_aobasis -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here @@ -17831,9 +17791,8 @@ In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:34, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/classicalsegment.h:25, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/espfit.h:25, - from /build/reproducible-path/votca-2022.1/xtp/src/tests/test_espfit.cc:25: + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/qmmolecule.h:25, + from /build/reproducible-path/votca-2022.1/xtp/src/tests/test_ecpaobasis.cc:17: /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; @@ -17843,22 +17802,68 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ -[ 73%] Linking CXX executable unit_test_bfgs_trm -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_bfgs_trm.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_bfgs_trm.dir/test_bfgs_trm.cc.o -o unit_test_bfgs_trm -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 73%] Built target unit_test_aomatrix3d -make -f xtp/src/tests/CMakeFiles/unit_test_densityintegration.dir/build.make xtp/src/tests/CMakeFiles/unit_test_densityintegration.dir/depend +[ 72%] Built target unit_test_aobasis +make -f xtp/src/tests/CMakeFiles/unit_test_hdf5.dir/build.make xtp/src/tests/CMakeFiles/unit_test_hdf5.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_densityintegration.dir/DependInfo.cmake --color= -[ 73%] Linking CXX executable unit_test_diis -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_diis.dir/link.txt --verbose=1 +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_hdf5.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/src/tests/CMakeFiles/unit_test_densityintegration.dir/build.make xtp/src/tests/CMakeFiles/unit_test_densityintegration.dir/build +make -f xtp/src/tests/CMakeFiles/unit_test_hdf5.dir/build.make xtp/src/tests/CMakeFiles/unit_test_hdf5.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_diis.dir/test_diis.cc.o -o unit_test_diis -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so -[ 75%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_densityintegration.dir/test_densityintegration.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_densityintegration.dir/test_densityintegration.cc.o -MF CMakeFiles/unit_test_densityintegration.dir/test_densityintegration.cc.o.d -o CMakeFiles/unit_test_densityintegration.dir/test_densityintegration.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_densityintegration.cc +[ 73%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_hdf5.dir/test_hdf5.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_hdf5.dir/test_hdf5.cc.o -MF CMakeFiles/unit_test_hdf5.dir/test_hdf5.cc.o.d -o CMakeFiles/unit_test_hdf5.dir/test_hdf5.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_hdf5.cc +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 42 | class CptTable { + | ^~~~~~~~ +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] + 42 | class CptTable { + | ^~~~~~~~ +In file included from /usr/include/hdf5/serial/H5Cpp.h:42: +/usr/include/hdf5/serial/H5CompType.h:40:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' + 40 | CompType(const CompType &original); + | ^~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] + 42 | class CptTable { + | ^~~~~~~~ +In file included from /usr/include/hdf5/serial/H5Cpp.h:26: +/usr/include/hdf5/serial/H5DcreatProp.h:137:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' + 137 | DSetCreatPropList(const DSetCreatPropList &orig); + | ^~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5DcreatProp.h:29:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] + 29 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { + | ^~~~~~~~~~~~~~~~~ +In file included from /usr/include/hdf5/serial/H5Cpp.h:25: +/usr/include/hdf5/serial/H5OcreatProp.h:53:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' + 53 | ObjCreatPropList(const ObjCreatPropList &original); + | ^~~~~~~~~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here + 42 | class CptTable { + | ^~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here + 132 | table = CptTable(name, sizeof(typename T::data), loc_); + | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 162 | attr = loc.createAttribute(name, *dataType, dp); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 164 | attr = loc.openAttribute(name); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] @@ -17952,47 +17957,27 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ +[ 75%] Linking CXX executable xtp_map +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/xtp_map.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/xtp_map.dir/xtp_map.cc.o -o xtp_map -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial: ../libxtp/libvotca_xtp.so.2022 ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm +[ 75%] Linking CXX executable unit_test_bfgs_trm +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_bfgs_trm.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_bfgs_trm.dir/test_bfgs_trm.cc.o -o unit_test_bfgs_trm -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 42 | class CptTable { - | ^~~~~~~~ -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] - 42 | class CptTable { - | ^~~~~~~~ -In file included from /usr/include/hdf5/serial/H5Cpp.h:42: -/usr/include/hdf5/serial/H5CompType.h:40:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' - 40 | CompType(const CompType &original); - | ^~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] - 42 | class CptTable { - | ^~~~~~~~ -In file included from /usr/include/hdf5/serial/H5Cpp.h:26: -/usr/include/hdf5/serial/H5DcreatProp.h:137:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' - 137 | DSetCreatPropList(const DSetCreatPropList &orig); - | ^~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5DcreatProp.h:29:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] - 29 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { - | ^~~~~~~~~~~~~~~~~ -In file included from /usr/include/hdf5/serial/H5Cpp.h:25: -/usr/include/hdf5/serial/H5OcreatProp.h:53:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' - 53 | ObjCreatPropList(const ObjCreatPropList &original); - | ^~~~~~~~~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here - 42 | class CptTable { - | ^~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here - 132 | table = CptTable(name, sizeof(typename T::data), loc_); - | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here +[ 75%] Built target xtp_map +make -f xtp/src/tests/CMakeFiles/unit_test_cubefile_writer.dir/build.make xtp/src/tests/CMakeFiles/unit_test_cubefile_writer.dir/depend +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_cubefile_writer.dir/DependInfo.cmake --color= +[ 75%] Linking CXX executable unit_test_aomatrix +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_aomatrix.dir/link.txt --verbose=1 +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f xtp/src/tests/CMakeFiles/unit_test_cubefile_writer.dir/build.make xtp/src/tests/CMakeFiles/unit_test_cubefile_writer.dir/build +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_aomatrix.dir/test_aomatrix.cc.o -o unit_test_aomatrix -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so +[ 75%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_cubefile_writer.dir/test_cubefile_writer.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_cubefile_writer.dir/test_cubefile_writer.cc.o -MF CMakeFiles/unit_test_cubefile_writer.dir/test_cubefile_writer.cc.o.d -o CMakeFiles/unit_test_cubefile_writer.dir/test_cubefile_writer.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_cubefile_writer.cc +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -18005,23 +17990,95 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ +In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:34, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/classicalsegment.h:25, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/espfit.h:25, + from /build/reproducible-path/votca-2022.1/xtp/src/tests/test_espfit.cc:25: +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 81 | loc_ = loc; + | ^~~ +In file included from /usr/include/hdf5/serial/H5Cpp.h:47, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:25: +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' [ 75%] Built target unit_test_bfgs_trm +make -f xtp/src/tests/CMakeFiles/unit_test_densityintegration.dir/build.make xtp/src/tests/CMakeFiles/unit_test_densityintegration.dir/depend +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_densityintegration.dir/DependInfo.cmake --color= +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f xtp/src/tests/CMakeFiles/unit_test_densityintegration.dir/build.make xtp/src/tests/CMakeFiles/unit_test_densityintegration.dir/build +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 76%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_densityintegration.dir/test_densityintegration.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_densityintegration.dir/test_densityintegration.cc.o -MF CMakeFiles/unit_test_densityintegration.dir/test_densityintegration.cc.o.d -o CMakeFiles/unit_test_densityintegration.dir/test_densityintegration.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_densityintegration.cc +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 76%] Built target unit_test_aomatrix make -f xtp/src/tests/CMakeFiles/unit_test_vxc_potential.dir/build.make xtp/src/tests/CMakeFiles/unit_test_vxc_potential.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_vxc_potential.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make -f xtp/src/tests/CMakeFiles/unit_test_vxc_potential.dir/build.make xtp/src/tests/CMakeFiles/unit_test_vxc_potential.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 75%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_vxc_potential.dir/test_vxc_potential.cc.o +[ 76%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_vxc_potential.dir/test_vxc_potential.cc.o cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_vxc_potential.dir/test_vxc_potential.cc.o -MF CMakeFiles/unit_test_vxc_potential.dir/test_vxc_potential.cc.o.d -o CMakeFiles/unit_test_vxc_potential.dir/test_vxc_potential.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_vxc_potential.cc +In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:31: +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 178 | attr = loc.createAttribute(name, *strType, dp); + | ^ +In file included from /usr/include/hdf5/serial/H5Cpp.h:34: +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 180 | attr = loc.openAttribute(name); + | ^ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 278 | parent = loc.createGroup(name); + | ^ +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 280 | parent = loc.openGroup(name); + | ^ +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 294 | parent = loc.createGroup(name); + | ^ +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 296 | parent = loc.openGroup(name); + | ^ +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ +[ 76%] Linking CXX executable unit_test_bseoperator_btda +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_bseoperator_btda.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_bseoperator_btda.dir/test_bseoperator_btda.cc.o -o unit_test_bseoperator_btda -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 75%] Built target unit_test_diis +[ 76%] Built target unit_test_bseoperator_btda make -f xtp/src/tests/CMakeFiles/unit_test_vxc_grid.dir/build.make xtp/src/tests/CMakeFiles/unit_test_vxc_grid.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_vxc_grid.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make -f xtp/src/tests/CMakeFiles/unit_test_vxc_grid.dir/build.make xtp/src/tests/CMakeFiles/unit_test_vxc_grid.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 76%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_vxc_grid.dir/test_vxc_grid.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_vxc_grid.dir/test_vxc_grid.cc.o -MF CMakeFiles/unit_test_vxc_grid.dir/test_vxc_grid.cc.o.d -o CMakeFiles/unit_test_vxc_grid.dir/test_vxc_grid.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_vxc_grid.cc In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/orbitals.h:31, @@ -18035,8 +18092,6 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ -[ 75%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_vxc_grid.dir/test_vxc_grid.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_vxc_grid.dir/test_vxc_grid.cc.o -MF CMakeFiles/unit_test_vxc_grid.dir/test_vxc_grid.cc.o.d -o CMakeFiles/unit_test_vxc_grid.dir/test_vxc_grid.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_vxc_grid.cc In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] @@ -18078,70 +18133,18 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 162 | attr = loc.createAttribute(name, *dataType, dp); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 164 | attr = loc.openAttribute(name); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -[ 76%] Linking CXX executable xtp_map -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 162 | attr = loc.createAttribute(name, *dataType, dp); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 164 | attr = loc.openAttribute(name); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/xtp_map.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/xtp_map.dir/xtp_map.cc.o -o xtp_map -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial: ../libxtp/libvotca_xtp.so.2022 ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm -[ 76%] Linking CXX executable unit_test_aomatrix -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_aomatrix.dir/link.txt --verbose=1 -[ 76%] Built target xtp_map -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_aomatrix.dir/test_aomatrix.cc.o -o unit_test_aomatrix -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so -make -f xtp/src/tests/CMakeFiles/unit_test_regular_grid.dir/build.make xtp/src/tests/CMakeFiles/unit_test_regular_grid.dir/depend -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_regular_grid.dir/DependInfo.cmake --color= -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/src/tests/CMakeFiles/unit_test_regular_grid.dir/build.make xtp/src/tests/CMakeFiles/unit_test_regular_grid.dir/build -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 76%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_regular_grid.dir/test_regular_grid.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_regular_grid.dir/test_regular_grid.cc.o -MF CMakeFiles/unit_test_regular_grid.dir/test_regular_grid.cc.o.d -o CMakeFiles/unit_test_regular_grid.dir/test_regular_grid.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_regular_grid.cc -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 162 | attr = loc.createAttribute(name, *dataType, dp); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 164 | attr = loc.openAttribute(name); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ +[ 76%] Linking CXX executable unit_test_diis +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_diis.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_diis.dir/test_diis.cc.o -o unit_test_diis -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so +[ 76%] Linking CXX executable unit_test_glink +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_glink.dir/link.txt --verbose=1 /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_glink.dir/test_glink.cc.o -o unit_test_glink -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ @@ -18188,22 +18191,17 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ +[ 76%] Linking CXX executable unit_test_aopotential +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_aopotential.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_aopotential.dir/test_aopotential.cc.o -o unit_test_aopotential -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 76%] Built target unit_test_aomatrix -make -f xtp/src/tests/CMakeFiles/unit_test_orbitals.dir/build.make xtp/src/tests/CMakeFiles/unit_test_orbitals.dir/depend -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_orbitals.dir/DependInfo.cmake --color= -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/src/tests/CMakeFiles/unit_test_orbitals.dir/build.make xtp/src/tests/CMakeFiles/unit_test_orbitals.dir/build -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 76%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_orbitals.dir/test_orbitals.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_orbitals.dir/test_orbitals.cc.o -MF CMakeFiles/unit_test_orbitals.dir/test_orbitals.cc.o.d -o CMakeFiles/unit_test_orbitals.dir/test_orbitals.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_orbitals.cc -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = double; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = double; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/bse_population.h:50:6: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +[ 76%] Built target unit_test_glink +make -f xtp/src/tests/CMakeFiles/unit_test_regular_grid.dir/build.make xtp/src/tests/CMakeFiles/unit_test_regular_grid.dir/depend /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ @@ -18213,6 +18211,33 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_regular_grid.dir/DependInfo.cmake --color= +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f xtp/src/tests/CMakeFiles/unit_test_regular_grid.dir/build.make xtp/src/tests/CMakeFiles/unit_test_regular_grid.dir/build +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 76%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_regular_grid.dir/test_regular_grid.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_regular_grid.dir/test_regular_grid.cc.o -MF CMakeFiles/unit_test_regular_grid.dir/test_regular_grid.cc.o.d -o CMakeFiles/unit_test_regular_grid.dir/test_regular_grid.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_regular_grid.cc +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 76%] Built target unit_test_diis +make -f xtp/src/tests/CMakeFiles/unit_test_orbitals.dir/build.make xtp/src/tests/CMakeFiles/unit_test_orbitals.dir/depend +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_orbitals.dir/DependInfo.cmake --color= +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f xtp/src/tests/CMakeFiles/unit_test_orbitals.dir/build.make xtp/src/tests/CMakeFiles/unit_test_orbitals.dir/build +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 76%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_orbitals.dir/test_orbitals.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_orbitals.dir/test_orbitals.cc.o -MF CMakeFiles/unit_test_orbitals.dir/test_orbitals.cc.o.d -o CMakeFiles/unit_test_orbitals.dir/test_orbitals.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_orbitals.cc +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 76%] Built target unit_test_aopotential +make -f xtp/src/tests/CMakeFiles/unit_test_polarsite.dir/build.make xtp/src/tests/CMakeFiles/unit_test_polarsite.dir/depend +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_polarsite.dir/DependInfo.cmake --color= +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f xtp/src/tests/CMakeFiles/unit_test_polarsite.dir/build.make xtp/src/tests/CMakeFiles/unit_test_polarsite.dir/build +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 76%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_polarsite.dir/test_polarsite.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_polarsite.dir/test_polarsite.cc.o -MF CMakeFiles/unit_test_polarsite.dir/test_polarsite.cc.o.d -o CMakeFiles/unit_test_polarsite.dir/test_polarsite.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_polarsite.cc In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2022.1/xtp/src/tests/test_hdf5.cc:29: @@ -18225,14 +18250,35 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ -[ 76%] Linking CXX executable unit_test_glink -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_glink.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_glink.dir/test_glink.cc.o -o unit_test_glink -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 76%] Built target unit_test_glink -make -f xtp/src/tests/CMakeFiles/unit_test_polarsite.dir/build.make xtp/src/tests/CMakeFiles/unit_test_polarsite.dir/depend -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_polarsite.dir/DependInfo.cmake --color= +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 162 | attr = loc.createAttribute(name, *dataType, dp); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 164 | attr = loc.openAttribute(name); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = double; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = double; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/bse_population.h:50:6: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 162 | attr = loc.createAttribute(name, *dataType, dp); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 164 | attr = loc.openAttribute(name); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] @@ -18252,11 +18298,9 @@ /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ -make -f xtp/src/tests/CMakeFiles/unit_test_polarsite.dir/build.make xtp/src/tests/CMakeFiles/unit_test_polarsite.dir/build /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ @@ -18267,7 +18311,6 @@ /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ @@ -18277,8 +18320,6 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ -[ 76%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_polarsite.dir/test_polarsite.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_polarsite.dir/test_polarsite.cc.o -MF CMakeFiles/unit_test_polarsite.dir/test_polarsite.cc.o.d -o CMakeFiles/unit_test_polarsite.dir/test_polarsite.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_polarsite.cc /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here @@ -18383,9 +18424,6 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ -[ 76%] Linking CXX executable unit_test_aopotential -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_aopotential.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_aopotential.dir/test_aopotential.cc.o -o unit_test_aopotential -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] @@ -18400,14 +18438,6 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 76%] Built target unit_test_aopotential -make -f xtp/src/tests/CMakeFiles/unit_test_staticsite.dir/build.make xtp/src/tests/CMakeFiles/unit_test_staticsite.dir/depend -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_staticsite.dir/DependInfo.cmake --color= -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/src/tests/CMakeFiles/unit_test_staticsite.dir/build.make xtp/src/tests/CMakeFiles/unit_test_staticsite.dir/build -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::StaticSite; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::StaticSite]' /build/reproducible-path/votca-2022.1/xtp/src/tests/test_hdf5.cc:246:17: required from here @@ -18444,8 +18474,6 @@ /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -[ 76%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_staticsite.dir/test_staticsite.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_staticsite.dir/test_staticsite.cc.o -MF CMakeFiles/unit_test_staticsite.dir/test_staticsite.cc.o.d -o CMakeFiles/unit_test_staticsite.dir/test_staticsite.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_staticsite.cc /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::StaticSite]' @@ -18462,24 +18490,26 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ +[ 76%] Linking CXX executable unit_test_dftcoupling +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_dftcoupling.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_dftcoupling.dir/test_dftcoupling.cc.o -o unit_test_dftcoupling -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 76%] Built target unit_test_dftcoupling +make -f xtp/src/tests/CMakeFiles/unit_test_staticsite.dir/build.make xtp/src/tests/CMakeFiles/unit_test_staticsite.dir/depend +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_staticsite.dir/DependInfo.cmake --color= +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f xtp/src/tests/CMakeFiles/unit_test_staticsite.dir/build.make xtp/src/tests/CMakeFiles/unit_test_staticsite.dir/build +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 76%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_staticsite.dir/test_staticsite.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_staticsite.dir/test_staticsite.cc.o -MF CMakeFiles/unit_test_staticsite.dir/test_staticsite.cc.o.d -o CMakeFiles/unit_test_staticsite.dir/test_staticsite.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_staticsite.cc +[ 76%] Linking CXX executable unit_test_ecpaobasis +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_ecpaobasis.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_ecpaobasis.dir/test_ecpaobasis.cc.o -o unit_test_ecpaobasis -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/orbitals.h:31, - from /build/reproducible-path/votca-2022.1/xtp/src/tests/test_vxc_potential.cc:27: -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 81 | loc_ = loc; - | ^~~ -In file included from /usr/include/hdf5/serial/H5Cpp.h:47, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:25: -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ -In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/orbitals.h:31, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/cubefile_writer.h:26, - from /build/reproducible-path/votca-2022.1/xtp/src/tests/test_cubefile_writer.cc:30: + from /build/reproducible-path/votca-2022.1/xtp/src/tests/test_densityintegration.cc:30: /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; @@ -18501,6 +18531,48 @@ /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 278 | parent = loc.createGroup(name); + | ^ +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 280 | parent = loc.openGroup(name); + | ^ +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 294 | parent = loc.createGroup(name); + | ^ +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 296 | parent = loc.openGroup(name); + | ^ +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ +In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/orbitals.h:31, + from /build/reproducible-path/votca-2022.1/xtp/src/tests/test_vxc_potential.cc:27: +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 81 | loc_ = loc; + | ^~~ +In file included from /usr/include/hdf5/serial/H5Cpp.h:47, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:25: +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] @@ -18516,9 +18588,6 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); @@ -18545,6 +18614,45 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/orbitals.h:31, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/cubefile_writer.h:26, + from /build/reproducible-path/votca-2022.1/xtp/src/tests/test_cubefile_writer.cc:30: +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 81 | loc_ = loc; + | ^~~ +In file included from /usr/include/hdf5/serial/H5Cpp.h:47, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:25: +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ +[ 76%] Built target unit_test_ecpaobasis +make -f xtp/src/tests/CMakeFiles/unit_test_ppm.dir/build.make xtp/src/tests/CMakeFiles/unit_test_ppm.dir/depend +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_ppm.dir/DependInfo.cmake --color= +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f xtp/src/tests/CMakeFiles/unit_test_ppm.dir/build.make xtp/src/tests/CMakeFiles/unit_test_ppm.dir/build +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 76%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_ppm.dir/test_ppm.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_ppm.dir/test_ppm.cc.o -MF CMakeFiles/unit_test_ppm.dir/test_ppm.cc.o.d -o CMakeFiles/unit_test_ppm.dir/test_ppm.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_ppm.cc +In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:31: +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 178 | attr = loc.createAttribute(name, *strType, dp); + | ^ +In file included from /usr/include/hdf5/serial/H5Cpp.h:34: +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 180 | attr = loc.openAttribute(name); + | ^ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); @@ -18584,20 +18692,6 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 162 | attr = loc.createAttribute(name, *dataType, dp); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 164 | attr = loc.openAttribute(name); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] @@ -18639,6 +18733,9 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ +[ 76%] Linking CXX executable unit_test_bse +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_bse.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_bse.dir/test_bse.cc.o -o unit_test_bse -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] @@ -18653,22 +18750,74 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ -[ 76%] Linking CXX executable unit_test_ecpaobasis -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_ecpaobasis.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_ecpaobasis.dir/test_ecpaobasis.cc.o -o unit_test_ecpaobasis -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 162 | attr = loc.createAttribute(name, *dataType, dp); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 164 | attr = loc.openAttribute(name); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 162 | attr = loc.createAttribute(name, *dataType, dp); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 164 | attr = loc.openAttribute(name); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 162 | attr = loc.createAttribute(name, *dataType, dp); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 164 | attr = loc.openAttribute(name); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 76%] Built target unit_test_bse +make -f xtp/src/tests/CMakeFiles/unit_test_qmnblist.dir/build.make xtp/src/tests/CMakeFiles/unit_test_qmnblist.dir/depend +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_qmnblist.dir/DependInfo.cmake --color= +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f xtp/src/tests/CMakeFiles/unit_test_qmnblist.dir/build.make xtp/src/tests/CMakeFiles/unit_test_qmnblist.dir/build +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 76%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_qmnblist.dir/test_qmnblist.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_qmnblist.dir/test_qmnblist.cc.o -MF CMakeFiles/unit_test_qmnblist.dir/test_qmnblist.cc.o.d -o CMakeFiles/unit_test_qmnblist.dir/test_qmnblist.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_qmnblist.cc +[ 78%] Linking CXX executable unit_test_convergenceacc In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/orbitals.h:31, - from /build/reproducible-path/votca-2022.1/xtp/src/tests/test_densityintegration.cc:30: + from /build/reproducible-path/votca-2022.1/xtp/src/tests/test_regular_grid.cc:28: /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_convergenceacc.dir/link.txt --verbose=1 In file included from /usr/include/hdf5/serial/H5Cpp.h:47, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_convergenceacc.dir/test_convergenceacc.cc.o -o unit_test_convergenceacc -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] @@ -18710,30 +18859,70 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 162 | attr = loc.createAttribute(name, *dataType, dp); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/orbitals.h:31, + from /build/reproducible-path/votca-2022.1/xtp/src/tests/test_orbitals.cc:30: +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 81 | loc_ = loc; + | ^~~ +In file included from /usr/include/hdf5/serial/H5Cpp.h:47, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:25: +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ +In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:31: +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 178 | attr = loc.createAttribute(name, *strType, dp); + | ^ +In file included from /usr/include/hdf5/serial/H5Cpp.h:34: /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 164 | attr = loc.openAttribute(name); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 180 | attr = loc.openAttribute(name); + | ^ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 278 | parent = loc.createGroup(name); + | ^ +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 280 | parent = loc.openGroup(name); + | ^ +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 294 | parent = loc.createGroup(name); + | ^ +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 296 | parent = loc.openGroup(name); + | ^ +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 76%] Built target unit_test_ecpaobasis -make -f xtp/src/tests/CMakeFiles/unit_test_ppm.dir/build.make xtp/src/tests/CMakeFiles/unit_test_ppm.dir/depend +[ 78%] Built target unit_test_convergenceacc +make -f xtp/src/tests/CMakeFiles/unit_test_qmpair.dir/build.make xtp/src/tests/CMakeFiles/unit_test_qmpair.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_ppm.dir/DependInfo.cmake --color= +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_qmpair.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/src/tests/CMakeFiles/unit_test_ppm.dir/build.make xtp/src/tests/CMakeFiles/unit_test_ppm.dir/build +make -f xtp/src/tests/CMakeFiles/unit_test_qmpair.dir/build.make xtp/src/tests/CMakeFiles/unit_test_qmpair.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 76%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_ppm.dir/test_ppm.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_ppm.dir/test_ppm.cc.o -MF CMakeFiles/unit_test_ppm.dir/test_ppm.cc.o.d -o CMakeFiles/unit_test_ppm.dir/test_ppm.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_ppm.cc +[ 78%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_qmpair.dir/test_qmpair.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_qmpair.dir/test_qmpair.cc.o -MF CMakeFiles/unit_test_qmpair.dir/test_qmpair.cc.o.d -o CMakeFiles/unit_test_qmpair.dir/test_qmpair.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_qmpair.cc /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here @@ -18852,94 +19041,12 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ -In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/orbitals.h:31, - from /build/reproducible-path/votca-2022.1/xtp/src/tests/test_regular_grid.cc:28: -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 81 | loc_ = loc; - | ^~~ -In file included from /usr/include/hdf5/serial/H5Cpp.h:47, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:25: -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ -In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:31: -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 178 | attr = loc.createAttribute(name, *strType, dp); - | ^ -In file included from /usr/include/hdf5/serial/H5Cpp.h:34: -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 180 | attr = loc.openAttribute(name); - | ^ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 278 | parent = loc.createGroup(name); - | ^ -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 280 | parent = loc.openGroup(name); - | ^ -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 294 | parent = loc.createGroup(name); - | ^ -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 296 | parent = loc.openGroup(name); - | ^ -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ -[ 76%] Linking CXX executable unit_test_dftcoupling -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_dftcoupling.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_dftcoupling.dir/test_dftcoupling.cc.o -o unit_test_dftcoupling -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 76%] Built target unit_test_dftcoupling -make -f xtp/src/tests/CMakeFiles/unit_test_qmnblist.dir/build.make xtp/src/tests/CMakeFiles/unit_test_qmnblist.dir/depend -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_qmnblist.dir/DependInfo.cmake --color= -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/src/tests/CMakeFiles/unit_test_qmnblist.dir/build.make xtp/src/tests/CMakeFiles/unit_test_qmnblist.dir/build -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 76%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_qmnblist.dir/test_qmnblist.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_qmnblist.dir/test_qmnblist.cc.o -MF CMakeFiles/unit_test_qmnblist.dir/test_qmnblist.cc.o.d -o CMakeFiles/unit_test_qmnblist.dir/test_qmnblist.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_qmnblist.cc -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 162 | attr = loc.createAttribute(name, *dataType, dp); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 164 | attr = loc.openAttribute(name); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ -[ 78%] Linking CXX executable unit_test_eris /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ @@ -18977,7 +19084,6 @@ /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_eris.dir/link.txt --verbose=1 /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ @@ -18987,7 +19093,20 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_eris.dir/test_eris.cc.o -o unit_test_eris -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 162 | attr = loc.createAttribute(name, *dataType, dp); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 164 | attr = loc.openAttribute(name); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here @@ -19040,97 +19159,22 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ +[ 79%] Linking CXX executable unit_test_eris +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_eris.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_eris.dir/test_eris.cc.o -o unit_test_eris -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 78%] Built target unit_test_eris -make -f xtp/src/tests/CMakeFiles/unit_test_qmpair.dir/build.make xtp/src/tests/CMakeFiles/unit_test_qmpair.dir/depend -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_qmpair.dir/DependInfo.cmake --color= -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/src/tests/CMakeFiles/unit_test_qmpair.dir/build.make xtp/src/tests/CMakeFiles/unit_test_qmpair.dir/build -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 78%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_qmpair.dir/test_qmpair.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_qmpair.dir/test_qmpair.cc.o -MF CMakeFiles/unit_test_qmpair.dir/test_qmpair.cc.o.d -o CMakeFiles/unit_test_qmpair.dir/test_qmpair.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_qmpair.cc -In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/orbitals.h:31, - from /build/reproducible-path/votca-2022.1/xtp/src/tests/test_orbitals.cc:30: -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 81 | loc_ = loc; - | ^~~ -In file included from /usr/include/hdf5/serial/H5Cpp.h:47, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:25: -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ -[ 78%] Linking CXX executable unit_test_espfit -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_espfit.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_espfit.dir/test_espfit.cc.o -o unit_test_espfit -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so -In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:31: -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 178 | attr = loc.createAttribute(name, *strType, dp); - | ^ -In file included from /usr/include/hdf5/serial/H5Cpp.h:34: -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 180 | attr = loc.openAttribute(name); - | ^ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 278 | parent = loc.createGroup(name); - | ^ -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 280 | parent = loc.openGroup(name); - | ^ -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 294 | parent = loc.createGroup(name); - | ^ -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 296 | parent = loc.openGroup(name); - | ^ -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 78%] Built target unit_test_espfit +[ 79%] Built target unit_test_eris make -f xtp/src/tests/CMakeFiles/unit_test_qmstate.dir/build.make xtp/src/tests/CMakeFiles/unit_test_qmstate.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_qmstate.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make -f xtp/src/tests/CMakeFiles/unit_test_qmstate.dir/build.make xtp/src/tests/CMakeFiles/unit_test_qmstate.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 78%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_qmstate.dir/test_qmstate.cc.o +[ 79%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_qmstate.dir/test_qmstate.cc.o cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_qmstate.dir/test_qmstate.cc.o -MF CMakeFiles/unit_test_qmstate.dir/test_qmstate.cc.o.d -o CMakeFiles/unit_test_qmstate.dir/test_qmstate.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_qmstate.cc -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 162 | attr = loc.createAttribute(name, *dataType, dp); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 164 | attr = loc.openAttribute(name); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ +[ 79%] Linking CXX executable unit_test_espfit +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_espfit.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_espfit.dir/test_espfit.cc.o -o unit_test_espfit -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here @@ -19183,32 +19227,6 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ -[ 78%] Linking CXX executable unit_test_bse -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_bse.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_bse.dir/test_bse.cc.o -o unit_test_bse -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so -[ 79%] Linking CXX executable unit_test_convergenceacc -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_convergenceacc.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_convergenceacc.dir/test_convergenceacc.cc.o -o unit_test_convergenceacc -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 79%] Built target unit_test_convergenceacc -make -f xtp/src/tests/CMakeFiles/unit_test_radial_euler_maclaurin_rule.dir/build.make xtp/src/tests/CMakeFiles/unit_test_radial_euler_maclaurin_rule.dir/depend -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_radial_euler_maclaurin_rule.dir/DependInfo.cmake --color= -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/src/tests/CMakeFiles/unit_test_radial_euler_maclaurin_rule.dir/build.make xtp/src/tests/CMakeFiles/unit_test_radial_euler_maclaurin_rule.dir/build -[ 79%] Built target unit_test_bse -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/src/tests/CMakeFiles/unit_test_rpa.dir/build.make xtp/src/tests/CMakeFiles/unit_test_rpa.dir/depend -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_rpa.dir/DependInfo.cmake --color= -[ 79%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_radial_euler_maclaurin_rule.dir/test_radial_euler_maclaurin_rule.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_radial_euler_maclaurin_rule.dir/test_radial_euler_maclaurin_rule.cc.o -MF CMakeFiles/unit_test_radial_euler_maclaurin_rule.dir/test_radial_euler_maclaurin_rule.cc.o.d -o CMakeFiles/unit_test_radial_euler_maclaurin_rule.dir/test_radial_euler_maclaurin_rule.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_radial_euler_maclaurin_rule.cc -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/src/tests/CMakeFiles/unit_test_rpa.dir/build.make xtp/src/tests/CMakeFiles/unit_test_rpa.dir/build -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 79%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_rpa.dir/test_rpa.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_rpa.dir/test_rpa.cc.o -MF CMakeFiles/unit_test_rpa.dir/test_rpa.cc.o.d -o CMakeFiles/unit_test_rpa.dir/test_rpa.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_rpa.cc /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here @@ -19261,14 +19279,23 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ -[ 79%] Linking CXX executable unit_test_staticsite -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_staticsite.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_staticsite.dir/test_staticsite.cc.o -o unit_test_staticsite -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 79%] Built target unit_test_espfit +make -f xtp/src/tests/CMakeFiles/unit_test_radial_euler_maclaurin_rule.dir/build.make xtp/src/tests/CMakeFiles/unit_test_radial_euler_maclaurin_rule.dir/depend +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_radial_euler_maclaurin_rule.dir/DependInfo.cmake --color= +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f xtp/src/tests/CMakeFiles/unit_test_radial_euler_maclaurin_rule.dir/build.make xtp/src/tests/CMakeFiles/unit_test_radial_euler_maclaurin_rule.dir/build +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 79%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_radial_euler_maclaurin_rule.dir/test_radial_euler_maclaurin_rule.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_radial_euler_maclaurin_rule.dir/test_radial_euler_maclaurin_rule.cc.o -MF CMakeFiles/unit_test_radial_euler_maclaurin_rule.dir/test_radial_euler_maclaurin_rule.cc.o.d -o CMakeFiles/unit_test_radial_euler_maclaurin_rule.dir/test_radial_euler_maclaurin_rule.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_radial_euler_maclaurin_rule.cc In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/ecpaobasis.h:24, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/aopotential.h:26, - from /build/reproducible-path/votca-2022.1/xtp/src/tests/test_ppm.cc:25: + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:34, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/segment.h:30, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/qmpair.h:32, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/qmnblist.h:30, + from /build/reproducible-path/votca-2022.1/xtp/src/tests/test_qmnblist.cc:24: /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; @@ -19319,42 +19346,28 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 162 | attr = loc.createAttribute(name, *dataType, dp); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 164 | attr = loc.openAttribute(name); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ [ 79%] Linking CXX executable unit_test_polarsite cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_polarsite.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_polarsite.dir/test_polarsite.cc.o -o unit_test_polarsite -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so -[ 79%] Linking CXX executable unit_test_vxc_grid -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_vxc_grid.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_vxc_grid.dir/test_vxc_grid.cc.o -o unit_test_vxc_grid -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so -[ 79%] Linking CXX executable unit_test_cubefile_writer -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_cubefile_writer.dir/link.txt --verbose=1 -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_cubefile_writer.dir/test_cubefile_writer.cc.o -o unit_test_cubefile_writer -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so -[ 79%] Built target unit_test_staticsite -make -f xtp/src/tests/CMakeFiles/unit_test_rpa_h2p.dir/build.make xtp/src/tests/CMakeFiles/unit_test_rpa_h2p.dir/depend -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_rpa_h2p.dir/DependInfo.cmake --color= -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/src/tests/CMakeFiles/unit_test_rpa_h2p.dir/build.make xtp/src/tests/CMakeFiles/unit_test_rpa_h2p.dir/build -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 79%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_rpa_h2p.dir/test_rpa_h2p.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_rpa_h2p.dir/test_rpa_h2p.cc.o -MF CMakeFiles/unit_test_rpa_h2p.dir/test_rpa_h2p.cc.o.d -o CMakeFiles/unit_test_rpa_h2p.dir/test_rpa_h2p.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_rpa_h2p.cc -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 79%] Built target unit_test_polarsite -make -f xtp/src/tests/CMakeFiles/unit_test_segment.dir/build.make xtp/src/tests/CMakeFiles/unit_test_segment.dir/depend -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_segment.dir/DependInfo.cmake --color= -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/src/tests/CMakeFiles/unit_test_segment.dir/build.make xtp/src/tests/CMakeFiles/unit_test_segment.dir/build -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 79%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_segment.dir/test_segment.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_segment.dir/test_segment.cc.o -MF CMakeFiles/unit_test_segment.dir/test_segment.cc.o.d -o CMakeFiles/unit_test_segment.dir/test_segment.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_segment.cc In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:34, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/segment.h:30, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/qmpair.h:32, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/qmnblist.h:30, - from /build/reproducible-path/votca-2022.1/xtp/src/tests/test_qmnblist.cc:24: + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/ecpaobasis.h:24, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/aopotential.h:26, + from /build/reproducible-path/votca-2022.1/xtp/src/tests/test_ppm.cc:25: /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; @@ -19405,18 +19418,46 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 79%] Built target unit_test_cubefile_writer -make -f xtp/src/tests/CMakeFiles/unit_test_aoshell.dir/build.make xtp/src/tests/CMakeFiles/unit_test_aoshell.dir/depend -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_aoshell.dir/DependInfo.cmake --color= -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/src/tests/CMakeFiles/unit_test_aoshell.dir/build.make xtp/src/tests/CMakeFiles/unit_test_aoshell.dir/build -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 79%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_aoshell.dir/test_aoshell.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_aoshell.dir/test_aoshell.cc.o -MF CMakeFiles/unit_test_aoshell.dir/test_aoshell.cc.o.d -o CMakeFiles/unit_test_aoshell.dir/test_aoshell.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_aoshell.cc -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::Atom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::Atom]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 42 | class CptTable { + | ^~~~~~~~ +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] + 42 | class CptTable { + | ^~~~~~~~ +In file included from /usr/include/hdf5/serial/H5Cpp.h:42: +/usr/include/hdf5/serial/H5CompType.h:40:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' + 40 | CompType(const CompType &original); + | ^~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] + 42 | class CptTable { + | ^~~~~~~~ +In file included from /usr/include/hdf5/serial/H5Cpp.h:26: +/usr/include/hdf5/serial/H5DcreatProp.h:137:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' + 137 | DSetCreatPropList(const DSetCreatPropList &orig); + | ^~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5DcreatProp.h:29:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] + 29 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { + | ^~~~~~~~~~~~~~~~~ +In file included from /usr/include/hdf5/serial/H5Cpp.h:25: +/usr/include/hdf5/serial/H5OcreatProp.h:53:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' + 53 | ObjCreatPropList(const ObjCreatPropList &original); + | ^~~~~~~~~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here + 42 | class CptTable { + | ^~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here + 132 | table = CptTable(name, sizeof(typename T::data), loc_); + | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::Atom]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -19430,35 +19471,17 @@ 32 | Attribute(const Attribute &original); | ^~~~~~~~~ make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 79%] Built target unit_test_vxc_grid -make -f xtp/src/tests/CMakeFiles/unit_test_sphere_lebedev_rule.dir/build.make xtp/src/tests/CMakeFiles/unit_test_sphere_lebedev_rule.dir/depend +[ 79%] Built target unit_test_polarsite +make -f xtp/src/tests/CMakeFiles/unit_test_rpa.dir/build.make xtp/src/tests/CMakeFiles/unit_test_rpa.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_sphere_lebedev_rule.dir/DependInfo.cmake --color= +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_rpa.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/src/tests/CMakeFiles/unit_test_sphere_lebedev_rule.dir/build.make xtp/src/tests/CMakeFiles/unit_test_sphere_lebedev_rule.dir/build +make -f xtp/src/tests/CMakeFiles/unit_test_rpa.dir/build.make xtp/src/tests/CMakeFiles/unit_test_rpa.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 79%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_sphere_lebedev_rule.dir/test_sphere_lebedev_rule.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_sphere_lebedev_rule.dir/test_sphere_lebedev_rule.cc.o -MF CMakeFiles/unit_test_sphere_lebedev_rule.dir/test_sphere_lebedev_rule.cc.o.d -o CMakeFiles/unit_test_sphere_lebedev_rule.dir/test_sphere_lebedev_rule.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_sphere_lebedev_rule.cc -[ 79%] Linking CXX executable unit_test_hdf5 -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_hdf5.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_hdf5.dir/test_hdf5.cc.o -o unit_test_hdf5 -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so -[ 79%] Linking CXX executable unit_test_vxc_potential -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_vxc_potential.dir/link.txt --verbose=1 -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 162 | attr = loc.createAttribute(name, *dataType, dp); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 164 | attr = loc.openAttribute(name); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_vxc_potential.dir/test_vxc_potential.cc.o -o unit_test_vxc_potential -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so +[ 79%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_rpa.dir/test_rpa.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_rpa.dir/test_rpa.cc.o -MF CMakeFiles/unit_test_rpa.dir/test_rpa.cc.o.d -o CMakeFiles/unit_test_rpa.dir/test_rpa.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_rpa.cc +[ 79%] Linking CXX executable unit_test_vxc_grid +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_vxc_grid.dir/link.txt --verbose=1 In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:34, @@ -19474,6 +19497,7 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_vxc_grid.dir/test_vxc_grid.cc.o -o unit_test_vxc_grid -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] @@ -19529,8 +19553,33 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ -[ 80%] Linking CXX executable unit_test_qmstate -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_qmstate.dir/link.txt --verbose=1 +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 162 | attr = loc.createAttribute(name, *dataType, dp); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 164 | attr = loc.openAttribute(name); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 79%] Built target unit_test_vxc_grid +make -f xtp/src/tests/CMakeFiles/unit_test_rpa_h2p.dir/build.make xtp/src/tests/CMakeFiles/unit_test_rpa_h2p.dir/depend +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_rpa_h2p.dir/DependInfo.cmake --color= +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f xtp/src/tests/CMakeFiles/unit_test_rpa_h2p.dir/build.make xtp/src/tests/CMakeFiles/unit_test_rpa_h2p.dir/build +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 79%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_rpa_h2p.dir/test_rpa_h2p.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_rpa_h2p.dir/test_rpa_h2p.cc.o -MF CMakeFiles/unit_test_rpa_h2p.dir/test_rpa_h2p.cc.o.d -o CMakeFiles/unit_test_rpa_h2p.dir/test_rpa_h2p.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_rpa_h2p.cc +[ 79%] Linking CXX executable unit_test_vxc_potential +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_vxc_potential.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_vxc_potential.dir/test_vxc_potential.cc.o -o unit_test_vxc_potential -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::Atom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::Atom]' /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here @@ -19583,19 +19632,60 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 79%] Built target unit_test_vxc_potential +make -f xtp/src/tests/CMakeFiles/unit_test_segment.dir/build.make xtp/src/tests/CMakeFiles/unit_test_segment.dir/depend +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_segment.dir/DependInfo.cmake --color= +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f xtp/src/tests/CMakeFiles/unit_test_segment.dir/build.make xtp/src/tests/CMakeFiles/unit_test_segment.dir/build +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 79%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_segment.dir/test_segment.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_segment.dir/test_segment.cc.o -MF CMakeFiles/unit_test_segment.dir/test_segment.cc.o.d -o CMakeFiles/unit_test_segment.dir/test_segment.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_segment.cc +[ 79%] Linking CXX executable unit_test_cubefile_writer +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_cubefile_writer.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_cubefile_writer.dir/test_cubefile_writer.cc.o -o unit_test_cubefile_writer -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so +[ 79%] Linking CXX executable unit_test_densityintegration +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_densityintegration.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_densityintegration.dir/test_densityintegration.cc.o -o unit_test_densityintegration -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so +[ 79%] Linking CXX executable unit_test_staticsite +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_staticsite.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_staticsite.dir/test_staticsite.cc.o -o unit_test_staticsite -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 79%] Built target unit_test_cubefile_writer +make -f xtp/src/tests/CMakeFiles/unit_test_aoshell.dir/build.make xtp/src/tests/CMakeFiles/unit_test_aoshell.dir/depend +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_aoshell.dir/DependInfo.cmake --color= +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f xtp/src/tests/CMakeFiles/unit_test_aoshell.dir/build.make xtp/src/tests/CMakeFiles/unit_test_aoshell.dir/build +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 79%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_aoshell.dir/test_aoshell.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_aoshell.dir/test_aoshell.cc.o -MF CMakeFiles/unit_test_aoshell.dir/test_aoshell.cc.o.d -o CMakeFiles/unit_test_aoshell.dir/test_aoshell.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_aoshell.cc +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 79%] Built target unit_test_densityintegration +make -f xtp/src/tests/CMakeFiles/unit_test_sphere_lebedev_rule.dir/build.make xtp/src/tests/CMakeFiles/unit_test_sphere_lebedev_rule.dir/depend +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_sphere_lebedev_rule.dir/DependInfo.cmake --color= +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f xtp/src/tests/CMakeFiles/unit_test_sphere_lebedev_rule.dir/build.make xtp/src/tests/CMakeFiles/unit_test_sphere_lebedev_rule.dir/build +[ 80%] Linking CXX executable unit_test_qmstate +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_qmstate.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_qmstate.dir/test_qmstate.cc.o -o unit_test_qmstate -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so +[ 80%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_sphere_lebedev_rule.dir/test_sphere_lebedev_rule.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_sphere_lebedev_rule.dir/test_sphere_lebedev_rule.cc.o -MF CMakeFiles/unit_test_sphere_lebedev_rule.dir/test_sphere_lebedev_rule.cc.o.d -o CMakeFiles/unit_test_sphere_lebedev_rule.dir/test_sphere_lebedev_rule.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_sphere_lebedev_rule.cc make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 80%] Built target unit_test_hdf5 +[ 80%] Built target unit_test_staticsite make -f xtp/src/tests/CMakeFiles/unit_test_statetracker.dir/build.make xtp/src/tests/CMakeFiles/unit_test_statetracker.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_statetracker.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make -f xtp/src/tests/CMakeFiles/unit_test_statetracker.dir/build.make xtp/src/tests/CMakeFiles/unit_test_statetracker.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' [ 80%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_statetracker.dir/test_statetracker.cc.o -[ 80%] Built target unit_test_vxc_potential cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_statetracker.dir/test_statetracker.cc.o -MF CMakeFiles/unit_test_statetracker.dir/test_statetracker.cc.o.d -o CMakeFiles/unit_test_statetracker.dir/test_statetracker.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_statetracker.cc +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 80%] Built target unit_test_qmstate make -f xtp/src/tests/CMakeFiles/unit_test_symmetric_matrix.dir/build.make xtp/src/tests/CMakeFiles/unit_test_symmetric_matrix.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_symmetric_matrix.dir/DependInfo.cmake --color= @@ -19604,60 +19694,14 @@ make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' [ 80%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_symmetric_matrix.dir/test_symmetric_matrix.cc.o cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_symmetric_matrix.dir/test_symmetric_matrix.cc.o -MF CMakeFiles/unit_test_symmetric_matrix.dir/test_symmetric_matrix.cc.o.d -o CMakeFiles/unit_test_symmetric_matrix.dir/test_symmetric_matrix.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_symmetric_matrix.cc -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::Atom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::Atom]' -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 42 | class CptTable { - | ^~~~~~~~ -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] - 42 | class CptTable { - | ^~~~~~~~ -In file included from /usr/include/hdf5/serial/H5Cpp.h:42: -/usr/include/hdf5/serial/H5CompType.h:40:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' - 40 | CompType(const CompType &original); - | ^~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] - 42 | class CptTable { - | ^~~~~~~~ -In file included from /usr/include/hdf5/serial/H5Cpp.h:26: -/usr/include/hdf5/serial/H5DcreatProp.h:137:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' - 137 | DSetCreatPropList(const DSetCreatPropList &orig); - | ^~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5DcreatProp.h:29:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] - 29 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { - | ^~~~~~~~~~~~~~~~~ -In file included from /usr/include/hdf5/serial/H5Cpp.h:25: -/usr/include/hdf5/serial/H5OcreatProp.h:53:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' - 53 | ObjCreatPropList(const ObjCreatPropList &original); - | ^~~~~~~~~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here - 42 | class CptTable { - | ^~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here - 132 | table = CptTable(name, sizeof(typename T::data), loc_); - | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::Atom]' -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 162 | attr = loc.createAttribute(name, *dataType, dp); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 164 | attr = loc.openAttribute(name); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ +[ 80%] Linking CXX executable unit_test_hdf5 +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_hdf5.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_hdf5.dir/test_hdf5.cc.o -o unit_test_hdf5 -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so +[ 80%] Linking CXX executable unit_test_qmnblist +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_qmnblist.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_qmnblist.dir/test_qmnblist.cc.o -o unit_test_qmnblist -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 80%] Built target unit_test_qmstate +[ 80%] Built target unit_test_hdf5 make -f xtp/src/tests/CMakeFiles/unit_test_threecenter_dft.dir/build.make xtp/src/tests/CMakeFiles/unit_test_threecenter_dft.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_threecenter_dft.dir/DependInfo.cmake --color= @@ -19666,14 +19710,11 @@ make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' [ 80%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_threecenter_dft.dir/test_threecenter_dft.cc.o cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_threecenter_dft.dir/test_threecenter_dft.cc.o -MF CMakeFiles/unit_test_threecenter_dft.dir/test_threecenter_dft.cc.o.d -o CMakeFiles/unit_test_threecenter_dft.dir/test_threecenter_dft.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_threecenter_dft.cc -[ 80%] Linking CXX executable unit_test_densityintegration -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_densityintegration.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_densityintegration.dir/test_densityintegration.cc.o -o unit_test_densityintegration -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so -[ 80%] Linking CXX executable unit_test_regular_grid -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_regular_grid.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_regular_grid.dir/test_regular_grid.cc.o -o unit_test_regular_grid -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so +[ 80%] Linking CXX executable unit_test_orbitals +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_orbitals.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_orbitals.dir/test_orbitals.cc.o -o unit_test_orbitals -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 80%] Built target unit_test_densityintegration +[ 80%] Built target unit_test_qmnblist make -f xtp/src/tests/CMakeFiles/unit_test_threecenter_gwbse.dir/build.make xtp/src/tests/CMakeFiles/unit_test_threecenter_gwbse.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_threecenter_gwbse.dir/DependInfo.cmake --color= @@ -19682,8 +19723,14 @@ make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' [ 80%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_threecenter_gwbse.dir/test_threecenter_gwbse.cc.o cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_threecenter_gwbse.dir/test_threecenter_gwbse.cc.o -MF CMakeFiles/unit_test_threecenter_gwbse.dir/test_threecenter_gwbse.cc.o.d -o CMakeFiles/unit_test_threecenter_gwbse.dir/test_threecenter_gwbse.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_threecenter_gwbse.cc +[ 80%] Linking CXX executable unit_test_qmpair +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_qmpair.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_qmpair.dir/test_qmpair.cc.o -o unit_test_qmpair -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so +[ 80%] Linking CXX executable unit_test_regular_grid +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_regular_grid.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_regular_grid.dir/test_regular_grid.cc.o -o unit_test_regular_grid -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 80%] Built target unit_test_regular_grid +[ 80%] Built target unit_test_orbitals make -f xtp/src/tests/CMakeFiles/unit_test_topology.dir/build.make xtp/src/tests/CMakeFiles/unit_test_topology.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_topology.dir/DependInfo.cmake --color= @@ -19692,9 +19739,17 @@ make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' [ 80%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_topology.dir/test_topology.cc.o cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_topology.dir/test_topology.cc.o -MF CMakeFiles/unit_test_topology.dir/test_topology.cc.o.d -o CMakeFiles/unit_test_topology.dir/test_topology.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_topology.cc +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 80%] Built target unit_test_qmpair +make -f xtp/src/tests/CMakeFiles/unit_test_sigma_exact.dir/build.make xtp/src/tests/CMakeFiles/unit_test_sigma_exact.dir/depend +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_sigma_exact.dir/DependInfo.cmake --color= +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f xtp/src/tests/CMakeFiles/unit_test_sigma_exact.dir/build.make xtp/src/tests/CMakeFiles/unit_test_sigma_exact.dir/build In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, - from /build/reproducible-path/votca-2022.1/xtp/src/tests/test_segment.cc:27: + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/orbitals.h:31, + from /build/reproducible-path/votca-2022.1/xtp/src/tests/test_radial_euler_maclaurin_rule.cc:27: /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; @@ -19704,10 +19759,77 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:31: +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 178 | attr = loc.createAttribute(name, *strType, dp); + | ^ +In file included from /usr/include/hdf5/serial/H5Cpp.h:34: +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 180 | attr = loc.openAttribute(name); + | ^ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +[ 80%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_sigma_exact.dir/test_sigma_exact.cc.o +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 278 | parent = loc.createGroup(name); + | ^ +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 280 | parent = loc.openGroup(name); + | ^ +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_sigma_exact.dir/test_sigma_exact.cc.o -MF CMakeFiles/unit_test_sigma_exact.dir/test_sigma_exact.cc.o.d -o CMakeFiles/unit_test_sigma_exact.dir/test_sigma_exact.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_sigma_exact.cc +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 294 | parent = loc.createGroup(name); + | ^ +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 296 | parent = loc.openGroup(name); + | ^ +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 80%] Built target unit_test_regular_grid +make -f xtp/src/tests/CMakeFiles/unit_test_sigma_ppm.dir/build.make xtp/src/tests/CMakeFiles/unit_test_sigma_ppm.dir/depend +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_sigma_ppm.dir/DependInfo.cmake --color= +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f xtp/src/tests/CMakeFiles/unit_test_sigma_ppm.dir/build.make xtp/src/tests/CMakeFiles/unit_test_sigma_ppm.dir/build +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 82%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_sigma_ppm.dir/test_sigma_ppm.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_sigma_ppm.dir/test_sigma_ppm.cc.o -MF CMakeFiles/unit_test_sigma_ppm.dir/test_sigma_ppm.cc.o.d -o CMakeFiles/unit_test_sigma_ppm.dir/test_sigma_ppm.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_sigma_ppm.cc +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 162 | attr = loc.createAttribute(name, *dataType, dp); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 164 | attr = loc.openAttribute(name); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/orbitals.h:31, - from /build/reproducible-path/votca-2022.1/xtp/src/tests/test_radial_euler_maclaurin_rule.cc:27: + from /build/reproducible-path/votca-2022.1/xtp/src/tests/test_segment.cc:27: /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; @@ -19758,6 +19880,19 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ +In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/orbitals.h:31, + from /build/reproducible-path/votca-2022.1/xtp/src/tests/test_rpa.cc:31: +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 81 | loc_ = loc; + | ^~~ +In file included from /usr/include/hdf5/serial/H5Cpp.h:47, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:25: +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] @@ -19813,11 +19948,8 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ -[ 80%] Linking CXX executable unit_test_qmpair -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_qmpair.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_qmpair.dir/test_qmpair.cc.o -o unit_test_qmpair -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::Atom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::Atom]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { @@ -19854,7 +19986,7 @@ | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::Atom]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); @@ -19868,11 +20000,46 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ -[ 80%] Linking CXX executable unit_test_qmnblist -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_qmnblist.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_qmnblist.dir/test_qmnblist.cc.o -o unit_test_qmnblist -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 42 | class CptTable { + | ^~~~~~~~ +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] + 42 | class CptTable { + | ^~~~~~~~ +In file included from /usr/include/hdf5/serial/H5Cpp.h:42: +/usr/include/hdf5/serial/H5CompType.h:40:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' + 40 | CompType(const CompType &original); + | ^~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] + 42 | class CptTable { + | ^~~~~~~~ +In file included from /usr/include/hdf5/serial/H5Cpp.h:26: +/usr/include/hdf5/serial/H5DcreatProp.h:137:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' + 137 | DSetCreatPropList(const DSetCreatPropList &orig); + | ^~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5DcreatProp.h:29:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] + 29 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { + | ^~~~~~~~~~~~~~~~~ +In file included from /usr/include/hdf5/serial/H5Cpp.h:25: +/usr/include/hdf5/serial/H5OcreatProp.h:53:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' + 53 | ObjCreatPropList(const ObjCreatPropList &original); + | ^~~~~~~~~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here + 42 | class CptTable { + | ^~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here + 132 | table = CptTable(name, sizeof(typename T::data), loc_); + | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -19885,90 +20052,60 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ -In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/orbitals.h:31, - from /build/reproducible-path/votca-2022.1/xtp/src/tests/test_rpa.cc:31: -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 81 | loc_ = loc; - | ^~~ -In file included from /usr/include/hdf5/serial/H5Cpp.h:47, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:25: -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ -In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:31: -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 178 | attr = loc.createAttribute(name, *strType, dp); - | ^ -In file included from /usr/include/hdf5/serial/H5Cpp.h:34: +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 162 | attr = loc.createAttribute(name, *dataType, dp); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 180 | attr = loc.openAttribute(name); - | ^ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 164 | attr = loc.openAttribute(name); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 278 | parent = loc.createGroup(name); - | ^ -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 280 | parent = loc.openGroup(name); - | ^ -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 294 | parent = loc.createGroup(name); - | ^ -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 296 | parent = loc.openGroup(name); - | ^ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::Atom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::Atom]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 42 | class CptTable { + | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 80%] Built target unit_test_qmpair -make -f xtp/src/tests/CMakeFiles/unit_test_sigma_exact.dir/build.make xtp/src/tests/CMakeFiles/unit_test_sigma_exact.dir/depend -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_sigma_exact.dir/DependInfo.cmake --color= -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/src/tests/CMakeFiles/unit_test_sigma_exact.dir/build.make xtp/src/tests/CMakeFiles/unit_test_sigma_exact.dir/build -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 80%] Linking CXX executable unit_test_orbitals -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_orbitals.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_orbitals.dir/test_orbitals.cc.o -o unit_test_orbitals -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so -[ 80%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_sigma_exact.dir/test_sigma_exact.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_sigma_exact.dir/test_sigma_exact.cc.o -MF CMakeFiles/unit_test_sigma_exact.dir/test_sigma_exact.cc.o.d -o CMakeFiles/unit_test_sigma_exact.dir/test_sigma_exact.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_sigma_exact.cc -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 80%] Built target unit_test_qmnblist -make -f xtp/src/tests/CMakeFiles/unit_test_sigma_ppm.dir/build.make xtp/src/tests/CMakeFiles/unit_test_sigma_ppm.dir/depend -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_sigma_ppm.dir/DependInfo.cmake --color= -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/src/tests/CMakeFiles/unit_test_sigma_ppm.dir/build.make xtp/src/tests/CMakeFiles/unit_test_sigma_ppm.dir/build -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 82%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_sigma_ppm.dir/test_sigma_ppm.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_sigma_ppm.dir/test_sigma_ppm.cc.o -MF CMakeFiles/unit_test_sigma_ppm.dir/test_sigma_ppm.cc.o.d -o CMakeFiles/unit_test_sigma_ppm.dir/test_sigma_ppm.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_sigma_ppm.cc -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 82%] Built target unit_test_orbitals -make -f xtp/src/tests/CMakeFiles/unit_test_sigma_cda.dir/build.make xtp/src/tests/CMakeFiles/unit_test_sigma_cda.dir/depend -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_sigma_cda.dir/DependInfo.cmake --color= -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] + 42 | class CptTable { + | ^~~~~~~~ +In file included from /usr/include/hdf5/serial/H5Cpp.h:42: +/usr/include/hdf5/serial/H5CompType.h:40:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' + 40 | CompType(const CompType &original); + | ^~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] + 42 | class CptTable { + | ^~~~~~~~ +In file included from /usr/include/hdf5/serial/H5Cpp.h:26: +/usr/include/hdf5/serial/H5DcreatProp.h:137:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' + 137 | DSetCreatPropList(const DSetCreatPropList &orig); + | ^~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5DcreatProp.h:29:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] + 29 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { + | ^~~~~~~~~~~~~~~~~ +In file included from /usr/include/hdf5/serial/H5Cpp.h:25: +/usr/include/hdf5/serial/H5OcreatProp.h:53:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' + 53 | ObjCreatPropList(const ObjCreatPropList &original); + | ^~~~~~~~~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here + 42 | class CptTable { + | ^~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here + 132 | table = CptTable(name, sizeof(typename T::data), loc_); + | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::Atom]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -19981,11 +20118,6 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/src/tests/CMakeFiles/unit_test_sigma_cda.dir/build.make xtp/src/tests/CMakeFiles/unit_test_sigma_cda.dir/build -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 82%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_sigma_cda.dir/test_sigma_cda.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_sigma_cda.dir/test_sigma_cda.cc.o -MF CMakeFiles/unit_test_sigma_cda.dir/test_sigma_cda.cc.o.d -o CMakeFiles/unit_test_sigma_cda.dir/test_sigma_cda.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_sigma_cda.cc In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/orbitals.h:31, @@ -20040,19 +20172,33 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ -In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/orbitals.h:31, - from /build/reproducible-path/votca-2022.1/xtp/src/tests/test_sphere_lebedev_rule.cc:28: -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 81 | loc_ = loc; - | ^~~ -In file included from /usr/include/hdf5/serial/H5Cpp.h:47, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:25: -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 162 | attr = loc.createAttribute(name, *dataType, dp); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 164 | attr = loc.openAttribute(name); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +[ 82%] Linking CXX executable unit_test_eigen +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_eigen.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_eigen.dir/test_eigen.cc.o -o unit_test_eigen -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 82%] Built target unit_test_eigen +make -f xtp/src/tests/CMakeFiles/unit_test_sigma_cda.dir/build.make xtp/src/tests/CMakeFiles/unit_test_sigma_cda.dir/depend +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_sigma_cda.dir/DependInfo.cmake --color= +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f xtp/src/tests/CMakeFiles/unit_test_sigma_cda.dir/build.make xtp/src/tests/CMakeFiles/unit_test_sigma_cda.dir/build +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 82%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_sigma_cda.dir/test_sigma_cda.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_sigma_cda.dir/test_sigma_cda.cc.o -MF CMakeFiles/unit_test_sigma_cda.dir/test_sigma_cda.cc.o.d -o CMakeFiles/unit_test_sigma_cda.dir/test_sigma_cda.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_sigma_cda.cc /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here @@ -20107,8 +20253,24 @@ | ^~~~~~~~~ In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/orbitals.h:31, - from /build/reproducible-path/votca-2022.1/xtp/src/tests/test_aoshell.cc:29: + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:34, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/segment.h:30, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/qmpair.h:32, + from /build/reproducible-path/votca-2022.1/xtp/src/tests/test_topology.cc:29: +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 81 | loc_ = loc; + | ^~~ +In file included from /usr/include/hdf5/serial/H5Cpp.h:47, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:25: +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ +In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:34, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/qmmolecule.h:25, + from /build/reproducible-path/votca-2022.1/xtp/src/tests/test_threecenter_dft.cc:30: /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; @@ -20159,6 +20321,20 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 162 | attr = loc.createAttribute(name, *dataType, dp); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 164 | attr = loc.openAttribute(name); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] @@ -20200,63 +20376,10 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 42 | class CptTable { - | ^~~~~~~~ -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] - 42 | class CptTable { - | ^~~~~~~~ -In file included from /usr/include/hdf5/serial/H5Cpp.h:42: -/usr/include/hdf5/serial/H5CompType.h:40:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' - 40 | CompType(const CompType &original); - | ^~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] - 42 | class CptTable { - | ^~~~~~~~ -In file included from /usr/include/hdf5/serial/H5Cpp.h:26: -/usr/include/hdf5/serial/H5DcreatProp.h:137:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' - 137 | DSetCreatPropList(const DSetCreatPropList &orig); - | ^~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5DcreatProp.h:29:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] - 29 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { - | ^~~~~~~~~~~~~~~~~ -In file included from /usr/include/hdf5/serial/H5Cpp.h:25: -/usr/include/hdf5/serial/H5OcreatProp.h:53:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' - 53 | ObjCreatPropList(const ObjCreatPropList &original); - | ^~~~~~~~~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here - 42 | class CptTable { - | ^~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here - 132 | table = CptTable(name, sizeof(typename T::data), loc_); - | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 162 | attr = loc.createAttribute(name, *dataType, dp); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 164 | attr = loc.openAttribute(name); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/orbitals.h:31, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/statetracker.h:29, - from /build/reproducible-path/votca-2022.1/xtp/src/tests/test_statetracker.cc:33: + from /build/reproducible-path/votca-2022.1/xtp/src/tests/test_aoshell.cc:29: /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; @@ -20285,6 +20408,15 @@ /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ +In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/orbitals.h:31, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/statetracker.h:29, + from /build/reproducible-path/votca-2022.1/xtp/src/tests/test_statetracker.cc:33: +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 81 | loc_ = loc; + | ^~~ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ @@ -20294,6 +20426,11 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ +In file included from /usr/include/hdf5/serial/H5Cpp.h:47, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:25: +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); @@ -20307,100 +20444,6 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 42 | class CptTable { - | ^~~~~~~~ -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] - 42 | class CptTable { - | ^~~~~~~~ -In file included from /usr/include/hdf5/serial/H5Cpp.h:42: -/usr/include/hdf5/serial/H5CompType.h:40:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' - 40 | CompType(const CompType &original); - | ^~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] - 42 | class CptTable { - | ^~~~~~~~ -In file included from /usr/include/hdf5/serial/H5Cpp.h:26: -/usr/include/hdf5/serial/H5DcreatProp.h:137:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' - 137 | DSetCreatPropList(const DSetCreatPropList &orig); - | ^~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5DcreatProp.h:29:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] - 29 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { - | ^~~~~~~~~~~~~~~~~ -In file included from /usr/include/hdf5/serial/H5Cpp.h:25: -/usr/include/hdf5/serial/H5OcreatProp.h:53:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' - 53 | ObjCreatPropList(const ObjCreatPropList &original); - | ^~~~~~~~~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here - 42 | class CptTable { - | ^~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here - 132 | table = CptTable(name, sizeof(typename T::data), loc_); - | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 162 | attr = loc.createAttribute(name, *dataType, dp); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 164 | attr = loc.openAttribute(name); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 162 | attr = loc.createAttribute(name, *dataType, dp); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 164 | attr = loc.openAttribute(name); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 162 | attr = loc.createAttribute(name, *dataType, dp); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 164 | attr = loc.openAttribute(name); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 162 | attr = loc.createAttribute(name, *dataType, dp); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 164 | attr = loc.openAttribute(name); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] @@ -20409,46 +20452,17 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ +In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:31: +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 178 | attr = loc.createAttribute(name, *strType, dp); + | ^ /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ -In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:34, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/qmmolecule.h:25, - from /build/reproducible-path/votca-2022.1/xtp/src/tests/test_threecenter_dft.cc:30: -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 81 | loc_ = loc; - | ^~~ -In file included from /usr/include/hdf5/serial/H5Cpp.h:47, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:25: -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ -In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:34, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/segment.h:30, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/qmpair.h:32, - from /build/reproducible-path/votca-2022.1/xtp/src/tests/test_topology.cc:29: -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 81 | loc_ = loc; - | ^~~ -In file included from /usr/include/hdf5/serial/H5Cpp.h:47, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:25: -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ -In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:31: -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 178 | attr = loc.createAttribute(name, *strType, dp); - | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:34: /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); @@ -20485,20 +20499,19 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 162 | attr = loc.createAttribute(name, *dataType, dp); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 164 | attr = loc.openAttribute(name); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ +In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/orbitals.h:31, + from /build/reproducible-path/votca-2022.1/xtp/src/tests/test_sphere_lebedev_rule.cc:28: +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 81 | loc_ = loc; + | ^~~ +In file included from /usr/include/hdf5/serial/H5Cpp.h:47, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:25: +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] @@ -20518,7 +20531,6 @@ /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ -[ 82%] Linking CXX executable unit_test_symmetric_matrix /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ @@ -20541,10 +20553,8 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_symmetric_matrix.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_symmetric_matrix.dir/test_symmetric_matrix.cc.o -o unit_test_symmetric_matrix -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::Atom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::Atom]' /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { @@ -20581,7 +20591,7 @@ | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::Atom]' /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); @@ -20595,22 +20605,8 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 162 | attr = loc.createAttribute(name, *dataType, dp); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 164 | attr = loc.openAttribute(name); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::Atom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::Atom]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { @@ -20647,7 +20643,7 @@ | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::Atom]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); @@ -20661,6 +20657,117 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ +In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:34, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/qmmolecule.h:25, + from /build/reproducible-path/votca-2022.1/xtp/src/tests/test_threecenter_gwbse.cc:29: +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 81 | loc_ = loc; + | ^~~ +In file included from /usr/include/hdf5/serial/H5Cpp.h:47, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:25: +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ +In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:31: +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 178 | attr = loc.createAttribute(name, *strType, dp); + | ^ +In file included from /usr/include/hdf5/serial/H5Cpp.h:34: +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 180 | attr = loc.openAttribute(name); + | ^ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 278 | parent = loc.createGroup(name); + | ^ +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 280 | parent = loc.openGroup(name); + | ^ +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 294 | parent = loc.createGroup(name); + | ^ +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 296 | parent = loc.openGroup(name); + | ^ +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 162 | attr = loc.createAttribute(name, *dataType, dp); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 164 | attr = loc.openAttribute(name); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 162 | attr = loc.createAttribute(name, *dataType, dp); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 164 | attr = loc.openAttribute(name); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 162 | attr = loc.createAttribute(name, *dataType, dp); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 164 | attr = loc.openAttribute(name); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 162 | attr = loc.createAttribute(name, *dataType, dp); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 164 | attr = loc.openAttribute(name); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here @@ -20713,16 +20820,9 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 82%] Built target unit_test_symmetric_matrix -make -f xtp/src/tests/CMakeFiles/unit_test_gw.dir/build.make xtp/src/tests/CMakeFiles/unit_test_gw.dir/depend -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_gw.dir/DependInfo.cmake --color= -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/src/tests/CMakeFiles/unit_test_gw.dir/build.make xtp/src/tests/CMakeFiles/unit_test_gw.dir/build -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 82%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_gw.dir/test_gw.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_gw.dir/test_gw.cc.o -MF CMakeFiles/unit_test_gw.dir/test_gw.cc.o.d -o CMakeFiles/unit_test_gw.dir/test_gw.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_gw.cc +[ 82%] Linking CXX executable unit_test_symmetric_matrix +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_symmetric_matrix.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_symmetric_matrix.dir/test_symmetric_matrix.cc.o -o unit_test_symmetric_matrix -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here @@ -20777,9 +20877,72 @@ | ^~~~~~~~~ In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:34, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/qmmolecule.h:25, - from /build/reproducible-path/votca-2022.1/xtp/src/tests/test_threecenter_gwbse.cc:29: + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/orbitals.h:31, + from /build/reproducible-path/votca-2022.1/xtp/src/tests/test_sigma_ppm.cc:33: +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 81 | loc_ = loc; + | ^~~ +In file included from /usr/include/hdf5/serial/H5Cpp.h:47, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:25: +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:31: +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 178 | attr = loc.createAttribute(name, *strType, dp); + | ^ +In file included from /usr/include/hdf5/serial/H5Cpp.h:34: +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 180 | attr = loc.openAttribute(name); + | ^ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 278 | parent = loc.createGroup(name); + | ^ +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 280 | parent = loc.openGroup(name); + | ^ +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 294 | parent = loc.createGroup(name); + | ^ +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 296 | parent = loc.openGroup(name); + | ^ +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ +[ 82%] Built target unit_test_symmetric_matrix +make -f xtp/src/tests/CMakeFiles/unit_test_gw.dir/build.make xtp/src/tests/CMakeFiles/unit_test_gw.dir/depend +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_gw.dir/DependInfo.cmake --color= +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f xtp/src/tests/CMakeFiles/unit_test_gw.dir/build.make xtp/src/tests/CMakeFiles/unit_test_gw.dir/build +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 82%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_gw.dir/test_gw.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_gw.dir/test_gw.cc.o -MF CMakeFiles/unit_test_gw.dir/test_gw.cc.o.d -o CMakeFiles/unit_test_gw.dir/test_gw.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_gw.cc +In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/orbitals.h:31, + from /build/reproducible-path/votca-2022.1/xtp/src/tests/test_sigma_exact.cc:33: /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; @@ -20882,6 +21045,75 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 162 | attr = loc.createAttribute(name, *dataType, dp); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 164 | attr = loc.openAttribute(name); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +[ 82%] Linking CXX executable unit_test_segment +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_segment.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_segment.dir/test_segment.cc.o -o unit_test_segment -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 42 | class CptTable { + | ^~~~~~~~ +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] + 42 | class CptTable { + | ^~~~~~~~ +In file included from /usr/include/hdf5/serial/H5Cpp.h:42: +/usr/include/hdf5/serial/H5CompType.h:40:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' + 40 | CompType(const CompType &original); + | ^~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] + 42 | class CptTable { + | ^~~~~~~~ +In file included from /usr/include/hdf5/serial/H5Cpp.h:26: +/usr/include/hdf5/serial/H5DcreatProp.h:137:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' + 137 | DSetCreatPropList(const DSetCreatPropList &orig); + | ^~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5DcreatProp.h:29:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] + 29 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { + | ^~~~~~~~~~~~~~~~~ +In file included from /usr/include/hdf5/serial/H5Cpp.h:25: +/usr/include/hdf5/serial/H5OcreatProp.h:53:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' + 53 | ObjCreatPropList(const ObjCreatPropList &original); + | ^~~~~~~~~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here + 42 | class CptTable { + | ^~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here + 132 | table = CptTable(name, sizeof(typename T::data), loc_); + | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 162 | attr = loc.createAttribute(name, *dataType, dp); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 164 | attr = loc.openAttribute(name); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here @@ -20934,9 +21166,6 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ -[ 82%] Linking CXX executable unit_test_segment -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_segment.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_segment.dir/test_segment.cc.o -o unit_test_segment -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] @@ -20951,9 +21180,6 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ -[ 82%] Linking CXX executable unit_test_eigen -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_eigen.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_eigen.dir/test_eigen.cc.o -o unit_test_eigen -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' [ 82%] Built target unit_test_segment make -f xtp/src/tests/CMakeFiles/unit_test_bse_operator.dir/build.make xtp/src/tests/CMakeFiles/unit_test_bse_operator.dir/depend @@ -20964,16 +21190,6 @@ make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' [ 82%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_bse_operator.dir/test_bse_operator.cc.o cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_bse_operator.dir/test_bse_operator.cc.o -MF CMakeFiles/unit_test_bse_operator.dir/test_bse_operator.cc.o.d -o CMakeFiles/unit_test_bse_operator.dir/test_bse_operator.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_bse_operator.cc -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 82%] Built target unit_test_eigen -make -f xtp/src/tests/CMakeFiles/unit_test_davidson.dir/build.make xtp/src/tests/CMakeFiles/unit_test_davidson.dir/depend -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_davidson.dir/DependInfo.cmake --color= -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/src/tests/CMakeFiles/unit_test_davidson.dir/build.make xtp/src/tests/CMakeFiles/unit_test_davidson.dir/build -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 82%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_davidson.dir/test_davidson.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_davidson.dir/test_davidson.cc.o -MF CMakeFiles/unit_test_davidson.dir/test_davidson.cc.o.d -o CMakeFiles/unit_test_davidson.dir/test_davidson.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_davidson.cc /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here @@ -21026,62 +21242,46 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ -In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/orbitals.h:31, - from /build/reproducible-path/votca-2022.1/xtp/src/tests/test_sigma_ppm.cc:33: -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 81 | loc_ = loc; - | ^~~ -In file included from /usr/include/hdf5/serial/H5Cpp.h:47, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:25: -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ -In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:31: -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 178 | attr = loc.createAttribute(name, *strType, dp); - | ^ -In file included from /usr/include/hdf5/serial/H5Cpp.h:34: -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 180 | attr = loc.openAttribute(name); - | ^ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 278 | parent = loc.createGroup(name); - | ^ -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 280 | parent = loc.openGroup(name); - | ^ -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 294 | parent = loc.createGroup(name); - | ^ -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 296 | parent = loc.openGroup(name); - | ^ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 42 | class CptTable { + | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] + 42 | class CptTable { + | ^~~~~~~~ +In file included from /usr/include/hdf5/serial/H5Cpp.h:42: +/usr/include/hdf5/serial/H5CompType.h:40:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' + 40 | CompType(const CompType &original); + | ^~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] + 42 | class CptTable { + | ^~~~~~~~ +In file included from /usr/include/hdf5/serial/H5Cpp.h:26: +/usr/include/hdf5/serial/H5DcreatProp.h:137:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' + 137 | DSetCreatPropList(const DSetCreatPropList &orig); + | ^~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5DcreatProp.h:29:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] + 29 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { + | ^~~~~~~~~~~~~~~~~ +In file included from /usr/include/hdf5/serial/H5Cpp.h:25: +/usr/include/hdf5/serial/H5OcreatProp.h:53:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' + 53 | ObjCreatPropList(const ObjCreatPropList &original); + | ^~~~~~~~~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here + 42 | class CptTable { + | ^~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here + 132 | table = CptTable(name, sizeof(typename T::data), loc_); + | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -21097,77 +21297,33 @@ [ 83%] Linking CXX executable unit_test_topology cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_topology.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_topology.dir/test_topology.cc.o -o unit_test_topology -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so -In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/orbitals.h:31, - from /build/reproducible-path/votca-2022.1/xtp/src/tests/test_sigma_cda.cc:33: -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 81 | loc_ = loc; - | ^~~ -In file included from /usr/include/hdf5/serial/H5Cpp.h:47, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:25: -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ -In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:31: -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 178 | attr = loc.createAttribute(name, *strType, dp); - | ^ -In file included from /usr/include/hdf5/serial/H5Cpp.h:34: -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 180 | attr = loc.openAttribute(name); - | ^ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 278 | parent = loc.createGroup(name); - | ^ -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 280 | parent = loc.openGroup(name); - | ^ -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 294 | parent = loc.createGroup(name); - | ^ -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 296 | parent = loc.openGroup(name); - | ^ -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ +[ 83%] Linking CXX executable unit_test_radial_euler_maclaurin_rule +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_radial_euler_maclaurin_rule.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_radial_euler_maclaurin_rule.dir/test_radial_euler_maclaurin_rule.cc.o -o unit_test_radial_euler_maclaurin_rule -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' [ 83%] Built target unit_test_topology +make -f xtp/src/tests/CMakeFiles/unit_test_davidson.dir/build.make xtp/src/tests/CMakeFiles/unit_test_davidson.dir/depend +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_davidson.dir/DependInfo.cmake --color= +[ 83%] Built target unit_test_radial_euler_maclaurin_rule make -f xtp/src/tests/CMakeFiles/unit_test_trustregion.dir/build.make xtp/src/tests/CMakeFiles/unit_test_trustregion.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_trustregion.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f xtp/src/tests/CMakeFiles/unit_test_davidson.dir/build.make xtp/src/tests/CMakeFiles/unit_test_davidson.dir/build +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make -f xtp/src/tests/CMakeFiles/unit_test_trustregion.dir/build.make xtp/src/tests/CMakeFiles/unit_test_trustregion.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 83%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_davidson.dir/test_davidson.cc.o [ 83%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_trustregion.dir/test_trustregion.cc.o cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_trustregion.dir/test_trustregion.cc.o -MF CMakeFiles/unit_test_trustregion.dir/test_trustregion.cc.o.d -o CMakeFiles/unit_test_trustregion.dir/test_trustregion.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_trustregion.cc -[ 83%] Linking CXX executable unit_test_rpa -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_rpa.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_rpa.dir/test_rpa.cc.o -o unit_test_rpa -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_davidson.dir/test_davidson.cc.o -MF CMakeFiles/unit_test_davidson.dir/test_davidson.cc.o.d -o CMakeFiles/unit_test_davidson.dir/test_davidson.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_davidson.cc In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/orbitals.h:31, - from /build/reproducible-path/votca-2022.1/xtp/src/tests/test_sigma_exact.cc:33: + from /build/reproducible-path/votca-2022.1/xtp/src/tests/test_sigma_cda.cc:33: /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; @@ -21177,8 +21333,6 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ -[ 83%] Linking CXX executable unit_test_radial_euler_maclaurin_rule -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_radial_euler_maclaurin_rule.dir/link.txt --verbose=1 In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] @@ -21194,7 +21348,6 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_radial_euler_maclaurin_rule.dir/test_radial_euler_maclaurin_rule.cc.o -o unit_test_radial_euler_maclaurin_rule -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); @@ -21221,6 +21374,15 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ +[ 83%] Linking CXX executable unit_test_threecenter_dft +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_threecenter_dft.dir/link.txt --verbose=1 +[ 84%] Linking CXX executable unit_test_rpa_h2p +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_rpa_h2p.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_threecenter_dft.dir/test_threecenter_dft.cc.o -o unit_test_threecenter_dft -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_rpa_h2p.dir/test_rpa_h2p.cc.o -o unit_test_rpa_h2p -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so +[ 84%] Linking CXX executable unit_test_rpa +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_rpa.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_rpa.dir/test_rpa.cc.o -o unit_test_rpa -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] @@ -21235,6 +21397,52 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 84%] Built target unit_test_threecenter_dft +make -f xtp/src/tests/CMakeFiles/unit_test_gnode.dir/build.make xtp/src/tests/CMakeFiles/unit_test_gnode.dir/depend +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_gnode.dir/DependInfo.cmake --color= +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f xtp/src/tests/CMakeFiles/unit_test_gnode.dir/build.make xtp/src/tests/CMakeFiles/unit_test_gnode.dir/build +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 84%] Built target unit_test_rpa +[ 84%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_gnode.dir/test_gnode.cc.o +make -f xtp/src/tests/CMakeFiles/unit_test_vc2index.dir/build.make xtp/src/tests/CMakeFiles/unit_test_vc2index.dir/depend +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_gnode.dir/test_gnode.cc.o -MF CMakeFiles/unit_test_gnode.dir/test_gnode.cc.o.d -o CMakeFiles/unit_test_gnode.dir/test_gnode.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_gnode.cc +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_vc2index.dir/DependInfo.cmake --color= +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f xtp/src/tests/CMakeFiles/unit_test_vc2index.dir/build.make xtp/src/tests/CMakeFiles/unit_test_vc2index.dir/build +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 84%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_vc2index.dir/test_vc2index.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_vc2index.dir/test_vc2index.cc.o -MF CMakeFiles/unit_test_vc2index.dir/test_vc2index.cc.o.d -o CMakeFiles/unit_test_vc2index.dir/test_vc2index.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_vc2index.cc +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 84%] Built target unit_test_rpa_h2p +make -f xtp/src/tests/CMakeFiles/unit_test_grid.dir/build.make xtp/src/tests/CMakeFiles/unit_test_grid.dir/depend +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_grid.dir/DependInfo.cmake --color= +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f xtp/src/tests/CMakeFiles/unit_test_grid.dir/build.make xtp/src/tests/CMakeFiles/unit_test_grid.dir/build +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 84%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_grid.dir/test_grid.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_grid.dir/test_grid.cc.o -MF CMakeFiles/unit_test_grid.dir/test_grid.cc.o.d -o CMakeFiles/unit_test_grid.dir/test_grid.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_grid.cc +[ 84%] Linking CXX executable unit_test_threecenter_gwbse +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_threecenter_gwbse.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_threecenter_gwbse.dir/test_threecenter_gwbse.cc.o -o unit_test_threecenter_gwbse -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so +[ 84%] Linking CXX executable unit_test_statetracker +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_statetracker.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_statetracker.dir/test_statetracker.cc.o -o unit_test_statetracker -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 84%] Built target unit_test_threecenter_gwbse +make -f xtp/src/tests/CMakeFiles/unit_test_segmentmapper.dir/build.make xtp/src/tests/CMakeFiles/unit_test_segmentmapper.dir/depend +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_segmentmapper.dir/DependInfo.cmake --color= +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f xtp/src/tests/CMakeFiles/unit_test_segmentmapper.dir/build.make xtp/src/tests/CMakeFiles/unit_test_segmentmapper.dir/build +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 84%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_segmentmapper.dir/test_segmentmapper.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_segmentmapper.dir/test_segmentmapper.cc.o -MF CMakeFiles/unit_test_segmentmapper.dir/test_segmentmapper.cc.o.d -o CMakeFiles/unit_test_segmentmapper.dir/test_segmentmapper.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_segmentmapper.cc /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here @@ -21287,46 +21495,19 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ +[ 84%] Linking CXX executable unit_test_sphere_lebedev_rule +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_sphere_lebedev_rule.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_sphere_lebedev_rule.dir/test_sphere_lebedev_rule.cc.o -o unit_test_sphere_lebedev_rule -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 83%] Built target unit_test_rpa -make -f xtp/src/tests/CMakeFiles/unit_test_gnode.dir/build.make xtp/src/tests/CMakeFiles/unit_test_gnode.dir/depend -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_gnode.dir/DependInfo.cmake --color= -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/src/tests/CMakeFiles/unit_test_gnode.dir/build.make xtp/src/tests/CMakeFiles/unit_test_gnode.dir/build -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 83%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_gnode.dir/test_gnode.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_gnode.dir/test_gnode.cc.o -MF CMakeFiles/unit_test_gnode.dir/test_gnode.cc.o.d -o CMakeFiles/unit_test_gnode.dir/test_gnode.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_gnode.cc -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 83%] Built target unit_test_radial_euler_maclaurin_rule -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 162 | attr = loc.createAttribute(name, *dataType, dp); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 164 | attr = loc.openAttribute(name); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -make -f xtp/src/tests/CMakeFiles/unit_test_vc2index.dir/build.make xtp/src/tests/CMakeFiles/unit_test_vc2index.dir/depend +[ 84%] Built target unit_test_statetracker +make -f xtp/src/tests/CMakeFiles/unit_test_eeinteractor.dir/build.make xtp/src/tests/CMakeFiles/unit_test_eeinteractor.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_vc2index.dir/DependInfo.cmake --color= +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_eeinteractor.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/src/tests/CMakeFiles/unit_test_vc2index.dir/build.make xtp/src/tests/CMakeFiles/unit_test_vc2index.dir/build +make -f xtp/src/tests/CMakeFiles/unit_test_eeinteractor.dir/build.make xtp/src/tests/CMakeFiles/unit_test_eeinteractor.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 83%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_vc2index.dir/test_vc2index.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_vc2index.dir/test_vc2index.cc.o -MF CMakeFiles/unit_test_vc2index.dir/test_vc2index.cc.o.d -o CMakeFiles/unit_test_vc2index.dir/test_vc2index.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_vc2index.cc -[ 83%] Linking CXX executable unit_test_statetracker -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_statetracker.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_statetracker.dir/test_statetracker.cc.o -o unit_test_statetracker -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so -[ 83%] Linking CXX executable unit_test_threecenter_gwbse -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_threecenter_gwbse.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_threecenter_gwbse.dir/test_threecenter_gwbse.cc.o -o unit_test_threecenter_gwbse -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so +[ 84%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_eeinteractor.dir/test_eeinteractor.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_eeinteractor.dir/test_eeinteractor.cc.o -MF CMakeFiles/unit_test_eeinteractor.dir/test_eeinteractor.cc.o.d -o CMakeFiles/unit_test_eeinteractor.dir/test_eeinteractor.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_eeinteractor.cc In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/orbitals.h:31, @@ -21383,143 +21564,20 @@ 63 | Group(const Group &original); | ^~~~~ make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 83%] Built target unit_test_statetracker -make -f xtp/src/tests/CMakeFiles/unit_test_grid.dir/build.make xtp/src/tests/CMakeFiles/unit_test_grid.dir/depend -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_grid.dir/DependInfo.cmake --color= -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/src/tests/CMakeFiles/unit_test_grid.dir/build.make xtp/src/tests/CMakeFiles/unit_test_grid.dir/build -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 83%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_grid.dir/test_grid.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_grid.dir/test_grid.cc.o -MF CMakeFiles/unit_test_grid.dir/test_grid.cc.o.d -o CMakeFiles/unit_test_grid.dir/test_grid.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_grid.cc -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 83%] Built target unit_test_threecenter_gwbse -make -f xtp/src/tests/CMakeFiles/unit_test_segmentmapper.dir/build.make xtp/src/tests/CMakeFiles/unit_test_segmentmapper.dir/depend -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 162 | attr = loc.createAttribute(name, *dataType, dp); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 164 | attr = loc.openAttribute(name); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ +[ 84%] Built target unit_test_sphere_lebedev_rule +make -f xtp/src/tests/CMakeFiles/unit_test_hist.dir/build.make xtp/src/tests/CMakeFiles/unit_test_hist.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_segmentmapper.dir/DependInfo.cmake --color= +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_hist.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/src/tests/CMakeFiles/unit_test_segmentmapper.dir/build.make xtp/src/tests/CMakeFiles/unit_test_segmentmapper.dir/build -[ 83%] Linking CXX executable unit_test_aoshell +make -f xtp/src/tests/CMakeFiles/unit_test_hist.dir/build.make xtp/src/tests/CMakeFiles/unit_test_hist.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 84%] Linking CXX executable unit_test_rpa_h2p -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_rpa_h2p.dir/link.txt --verbose=1 +[ 84%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_hist.dir/test_hist.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_hist.dir/test_hist.cc.o -MF CMakeFiles/unit_test_hist.dir/test_hist.cc.o.d -o CMakeFiles/unit_test_hist.dir/test_hist.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_hist.cc +[ 84%] Linking CXX executable unit_test_aoshell cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_aoshell.dir/link.txt --verbose=1 -[ 84%] Linking CXX executable unit_test_sphere_lebedev_rule -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_sphere_lebedev_rule.dir/link.txt --verbose=1 -[ 84%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_segmentmapper.dir/test_segmentmapper.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_segmentmapper.dir/test_segmentmapper.cc.o -MF CMakeFiles/unit_test_segmentmapper.dir/test_segmentmapper.cc.o.d -o CMakeFiles/unit_test_segmentmapper.dir/test_segmentmapper.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_segmentmapper.cc -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_rpa_h2p.dir/test_rpa_h2p.cc.o -o unit_test_rpa_h2p -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_sphere_lebedev_rule.dir/test_sphere_lebedev_rule.cc.o -o unit_test_sphere_lebedev_rule -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_aoshell.dir/test_aoshell.cc.o -o unit_test_aoshell -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so -[ 84%] Linking CXX executable unit_test_threecenter_dft -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_threecenter_dft.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_threecenter_dft.dir/test_threecenter_dft.cc.o -o unit_test_threecenter_dft -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 42 | class CptTable { - | ^~~~~~~~ -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] - 42 | class CptTable { - | ^~~~~~~~ -In file included from /usr/include/hdf5/serial/H5Cpp.h:42: -/usr/include/hdf5/serial/H5CompType.h:40:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' - 40 | CompType(const CompType &original); - | ^~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] - 42 | class CptTable { - | ^~~~~~~~ -In file included from /usr/include/hdf5/serial/H5Cpp.h:26: -/usr/include/hdf5/serial/H5DcreatProp.h:137:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' - 137 | DSetCreatPropList(const DSetCreatPropList &orig); - | ^~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5DcreatProp.h:29:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] - 29 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { - | ^~~~~~~~~~~~~~~~~ -In file included from /usr/include/hdf5/serial/H5Cpp.h:25: -/usr/include/hdf5/serial/H5OcreatProp.h:53:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' - 53 | ObjCreatPropList(const ObjCreatPropList &original); - | ^~~~~~~~~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here - 42 | class CptTable { - | ^~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here - 132 | table = CptTable(name, sizeof(typename T::data), loc_); - | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 162 | attr = loc.createAttribute(name, *dataType, dp); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 164 | attr = loc.openAttribute(name); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 42 | class CptTable { - | ^~~~~~~~ -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] - 42 | class CptTable { - | ^~~~~~~~ -In file included from /usr/include/hdf5/serial/H5Cpp.h:42: -/usr/include/hdf5/serial/H5CompType.h:40:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' - 40 | CompType(const CompType &original); - | ^~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] - 42 | class CptTable { - | ^~~~~~~~ -In file included from /usr/include/hdf5/serial/H5Cpp.h:26: -/usr/include/hdf5/serial/H5DcreatProp.h:137:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' - 137 | DSetCreatPropList(const DSetCreatPropList &orig); - | ^~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5DcreatProp.h:29:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] - 29 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { - | ^~~~~~~~~~~~~~~~~ -In file included from /usr/include/hdf5/serial/H5Cpp.h:25: -/usr/include/hdf5/serial/H5OcreatProp.h:53:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' - 53 | ObjCreatPropList(const ObjCreatPropList &original); - | ^~~~~~~~~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here - 42 | class CptTable { - | ^~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here - 132 | table = CptTable(name, sizeof(typename T::data), loc_); - | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -21533,19 +21591,18 @@ 32 | Attribute(const Attribute &original); | ^~~~~~~~~ make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 84%] Built target unit_test_threecenter_dft -make -f xtp/src/tests/CMakeFiles/unit_test_eeinteractor.dir/build.make xtp/src/tests/CMakeFiles/unit_test_eeinteractor.dir/depend +[ 84%] Built target unit_test_aoshell +make -f xtp/src/tests/CMakeFiles/unit_test_qmfragment.dir/build.make xtp/src/tests/CMakeFiles/unit_test_qmfragment.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_eeinteractor.dir/DependInfo.cmake --color= -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 84%] Built target unit_test_sphere_lebedev_rule +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_qmfragment.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/src/tests/CMakeFiles/unit_test_hist.dir/build.make xtp/src/tests/CMakeFiles/unit_test_hist.dir/depend -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/src/tests/CMakeFiles/unit_test_eeinteractor.dir/build.make xtp/src/tests/CMakeFiles/unit_test_eeinteractor.dir/build -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_hist.dir/DependInfo.cmake --color= +make -f xtp/src/tests/CMakeFiles/unit_test_qmfragment.dir/build.make xtp/src/tests/CMakeFiles/unit_test_qmfragment.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 86%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_qmfragment.dir/test_qmfragment.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_qmfragment.dir/test_qmfragment.cc.o -MF CMakeFiles/unit_test_qmfragment.dir/test_qmfragment.cc.o.d -o CMakeFiles/unit_test_qmfragment.dir/test_qmfragment.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_qmfragment.cc +[ 86%] Linking CXX executable unit_test_sigma_exact +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_sigma_exact.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_sigma_exact.dir/test_sigma_exact.cc.o -o unit_test_sigma_exact -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/orbitals.h:31, @@ -21559,23 +21616,6 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ -[ 84%] Built target unit_test_aoshell -make -f xtp/src/tests/CMakeFiles/unit_test_qmfragment.dir/build.make xtp/src/tests/CMakeFiles/unit_test_qmfragment.dir/depend -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_qmfragment.dir/DependInfo.cmake --color= -[ 84%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_eeinteractor.dir/test_eeinteractor.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_eeinteractor.dir/test_eeinteractor.cc.o -MF CMakeFiles/unit_test_eeinteractor.dir/test_eeinteractor.cc.o.d -o CMakeFiles/unit_test_eeinteractor.dir/test_eeinteractor.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_eeinteractor.cc -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/src/tests/CMakeFiles/unit_test_hist.dir/build.make xtp/src/tests/CMakeFiles/unit_test_hist.dir/build -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/src/tests/CMakeFiles/unit_test_qmfragment.dir/build.make xtp/src/tests/CMakeFiles/unit_test_qmfragment.dir/build -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 84%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_hist.dir/test_hist.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_hist.dir/test_hist.cc.o -MF CMakeFiles/unit_test_hist.dir/test_hist.cc.o.d -o CMakeFiles/unit_test_hist.dir/test_hist.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_hist.cc -[ 86%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_qmfragment.dir/test_qmfragment.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_qmfragment.dir/test_qmfragment.cc.o -MF CMakeFiles/unit_test_qmfragment.dir/test_qmfragment.cc.o.d -o CMakeFiles/unit_test_qmfragment.dir/test_qmfragment.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_qmfragment.cc -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] @@ -21591,8 +21631,6 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ -[ 86%] Built target unit_test_rpa_h2p -make -f xtp/src/tests/CMakeFiles/unit_test_jobtopology.dir/build.make xtp/src/tests/CMakeFiles/unit_test_jobtopology.dir/depend /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); @@ -21606,8 +21644,6 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_jobtopology.dir/DependInfo.cmake --color= /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); @@ -21622,24 +21658,18 @@ 63 | Group(const Group &original); | ^~~~~ make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 86%] Built target unit_test_sigma_exact +make -f xtp/src/tests/CMakeFiles/unit_test_jobtopology.dir/build.make xtp/src/tests/CMakeFiles/unit_test_jobtopology.dir/depend +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_jobtopology.dir/DependInfo.cmake --color= +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make -f xtp/src/tests/CMakeFiles/unit_test_jobtopology.dir/build.make xtp/src/tests/CMakeFiles/unit_test_jobtopology.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' [ 86%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_jobtopology.dir/test_jobtopology.cc.o cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_jobtopology.dir/test_jobtopology.cc.o -MF CMakeFiles/unit_test_jobtopology.dir/test_jobtopology.cc.o.d -o CMakeFiles/unit_test_jobtopology.dir/test_jobtopology.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_jobtopology.cc -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 162 | attr = loc.createAttribute(name, *dataType, dp); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 164 | attr = loc.openAttribute(name); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ +[ 86%] Linking CXX executable unit_test_ppm +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_ppm.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_ppm.dir/test_ppm.cc.o -o unit_test_ppm -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here @@ -21692,46 +21722,23 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 42 | class CptTable { - | ^~~~~~~~ +In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:34, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/qmmolecule.h:25, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/grid.h:31, + from /build/reproducible-path/votca-2022.1/xtp/src/tests/test_grid.cc:29: +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 81 | loc_ = loc; + | ^~~ +In file included from /usr/include/hdf5/serial/H5Cpp.h:47, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] - 42 | class CptTable { - | ^~~~~~~~ -In file included from /usr/include/hdf5/serial/H5Cpp.h:42: -/usr/include/hdf5/serial/H5CompType.h:40:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' - 40 | CompType(const CompType &original); - | ^~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] - 42 | class CptTable { - | ^~~~~~~~ -In file included from /usr/include/hdf5/serial/H5Cpp.h:26: -/usr/include/hdf5/serial/H5DcreatProp.h:137:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' - 137 | DSetCreatPropList(const DSetCreatPropList &orig); - | ^~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5DcreatProp.h:29:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] - 29 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { - | ^~~~~~~~~~~~~~~~~ -In file included from /usr/include/hdf5/serial/H5Cpp.h:25: -/usr/include/hdf5/serial/H5OcreatProp.h:53:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' - 53 | ObjCreatPropList(const ObjCreatPropList &original); - | ^~~~~~~~~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here - 42 | class CptTable { - | ^~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here - 132 | table = CptTable(name, sizeof(typename T::data), loc_); - | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -21744,35 +21751,8 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ -[ 87%] Linking CXX executable unit_test_vc2index -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_vc2index.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_vc2index.dir/test_vc2index.cc.o -o unit_test_vc2index -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 87%] Built target unit_test_vc2index -make -f xtp/src/tests/CMakeFiles/unit_test_dipoledipoleinteraction.dir/build.make xtp/src/tests/CMakeFiles/unit_test_dipoledipoleinteraction.dir/depend -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_dipoledipoleinteraction.dir/DependInfo.cmake --color= -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/src/tests/CMakeFiles/unit_test_dipoledipoleinteraction.dir/build.make xtp/src/tests/CMakeFiles/unit_test_dipoledipoleinteraction.dir/build -In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:34, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/segment.h:30, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/qmpair.h:32, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/gnode.h:25, - from /build/reproducible-path/votca-2022.1/xtp/src/tests/test_gnode.cc:32: -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 81 | loc_ = loc; - | ^~~ -In file included from /usr/include/hdf5/serial/H5Cpp.h:47, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:25: -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 89%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_dipoledipoleinteraction.dir/test_dipoledipoleinteraction.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_dipoledipoleinteraction.dir/test_dipoledipoleinteraction.cc.o -MF CMakeFiles/unit_test_dipoledipoleinteraction.dir/test_dipoledipoleinteraction.cc.o.d -o CMakeFiles/unit_test_dipoledipoleinteraction.dir/test_dipoledipoleinteraction.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_dipoledipoleinteraction.cc +[ 86%] Linking CXX executable unit_test_sigma_ppm +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_sigma_ppm.dir/link.txt --verbose=1 In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] @@ -21788,6 +21768,7 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_sigma_ppm.dir/test_sigma_ppm.cc.o -o unit_test_sigma_ppm -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); @@ -21828,12 +21809,26 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 86%] Built target unit_test_ppm +make -f xtp/src/tests/CMakeFiles/unit_test_dipoledipoleinteraction.dir/build.make xtp/src/tests/CMakeFiles/unit_test_dipoledipoleinteraction.dir/depend +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_dipoledipoleinteraction.dir/DependInfo.cmake --color= +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f xtp/src/tests/CMakeFiles/unit_test_dipoledipoleinteraction.dir/build.make xtp/src/tests/CMakeFiles/unit_test_dipoledipoleinteraction.dir/build +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 87%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_dipoledipoleinteraction.dir/test_dipoledipoleinteraction.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_dipoledipoleinteraction.dir/test_dipoledipoleinteraction.cc.o -MF CMakeFiles/unit_test_dipoledipoleinteraction.dir/test_dipoledipoleinteraction.cc.o.d -o CMakeFiles/unit_test_dipoledipoleinteraction.dir/test_dipoledipoleinteraction.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_dipoledipoleinteraction.cc +[ 89%] Linking CXX executable unit_test_vc2index +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_vc2index.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_vc2index.dir/test_vc2index.cc.o -o unit_test_vc2index -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:34, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/qmmolecule.h:25, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/grid.h:31, - from /build/reproducible-path/votca-2022.1/xtp/src/tests/test_grid.cc:29: + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/segment.h:30, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/qmpair.h:32, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/gnode.h:25, + from /build/reproducible-path/votca-2022.1/xtp/src/tests/test_gnode.cc:32: /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; @@ -21884,19 +21879,60 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ -In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/hist.h:25, - from /build/reproducible-path/votca-2022.1/xtp/src/tests/test_hist.cc:28: -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 81 | loc_ = loc; - | ^~~ -In file included from /usr/include/hdf5/serial/H5Cpp.h:47, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:25: +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 42 | class CptTable { + | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] + 42 | class CptTable { + | ^~~~~~~~ +In file included from /usr/include/hdf5/serial/H5Cpp.h:42: +/usr/include/hdf5/serial/H5CompType.h:40:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' + 40 | CompType(const CompType &original); + | ^~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] + 42 | class CptTable { + | ^~~~~~~~ +In file included from /usr/include/hdf5/serial/H5Cpp.h:26: +/usr/include/hdf5/serial/H5DcreatProp.h:137:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' + 137 | DSetCreatPropList(const DSetCreatPropList &orig); + | ^~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5DcreatProp.h:29:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] + 29 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { + | ^~~~~~~~~~~~~~~~~ +In file included from /usr/include/hdf5/serial/H5Cpp.h:25: +/usr/include/hdf5/serial/H5OcreatProp.h:53:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' + 53 | ObjCreatPropList(const ObjCreatPropList &original); + | ^~~~~~~~~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here + 42 | class CptTable { + | ^~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here + 132 | table = CptTable(name, sizeof(typename T::data), loc_); + | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 162 | attr = loc.createAttribute(name, *dataType, dp); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 164 | attr = loc.openAttribute(name); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 89%] Built target unit_test_vc2index /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] @@ -21911,6 +21947,27 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ +make -f xtp/src/tests/CMakeFiles/unit_test_populationanalysis.dir/build.make xtp/src/tests/CMakeFiles/unit_test_populationanalysis.dir/depend +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_populationanalysis.dir/DependInfo.cmake --color= +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f xtp/src/tests/CMakeFiles/unit_test_populationanalysis.dir/build.make xtp/src/tests/CMakeFiles/unit_test_populationanalysis.dir/build +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 90%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_populationanalysis.dir/test_populationanalysis.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_populationanalysis.dir/test_populationanalysis.cc.o -MF CMakeFiles/unit_test_populationanalysis.dir/test_populationanalysis.cc.o.d -o CMakeFiles/unit_test_populationanalysis.dir/test_populationanalysis.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_populationanalysis.cc +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 90%] Built target unit_test_sigma_ppm +make -f xtp/src/tests/CMakeFiles/unit_test_orca.dir/build.make xtp/src/tests/CMakeFiles/unit_test_orca.dir/depend +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_orca.dir/DependInfo.cmake --color= +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f xtp/src/tests/CMakeFiles/unit_test_orca.dir/build.make xtp/src/tests/CMakeFiles/unit_test_orca.dir/build +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 90%] Linking CXX executable unit_test_trustregion +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_trustregion.dir/link.txt --verbose=1 +[ 90%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_orca.dir/test_orca.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_orca.dir/test_orca.cc.o -MF CMakeFiles/unit_test_orca.dir/test_orca.cc.o.d -o CMakeFiles/unit_test_orca.dir/test_orca.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_orca.cc +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_trustregion.dir/test_trustregion.cc.o -o unit_test_trustregion -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::Atom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::Atom]' /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here @@ -21947,50 +22004,6 @@ /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -[ 89%] Linking CXX executable unit_test_trustregion -In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:31: -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 178 | attr = loc.createAttribute(name, *strType, dp); - | ^ -In file included from /usr/include/hdf5/serial/H5Cpp.h:34: -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 180 | attr = loc.openAttribute(name); - | ^ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_trustregion.dir/link.txt --verbose=1 -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 278 | parent = loc.createGroup(name); - | ^ -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 280 | parent = loc.openGroup(name); - | ^ -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 294 | parent = loc.createGroup(name); - | ^ -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 296 | parent = loc.openGroup(name); - | ^ -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_trustregion.dir/test_trustregion.cc.o -o unit_test_trustregion -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::Atom]' @@ -22007,6 +22020,32 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 90%] Built target unit_test_trustregion +In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:34, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/classicalsegment.h:25, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/eeinteractor.h:25, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/dipoledipoleinteraction.h:23, + from /build/reproducible-path/votca-2022.1/xtp/src/tests/test_eeinteractor.cc:28: +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 81 | loc_ = loc; + | ^~~ +In file included from /usr/include/hdf5/serial/H5Cpp.h:47, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:25: +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ +make -f xtp/src/tests/CMakeFiles/unit_test_dftengine.dir/build.make xtp/src/tests/CMakeFiles/unit_test_dftengine.dir/depend +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_dftengine.dir/DependInfo.cmake --color= +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f xtp/src/tests/CMakeFiles/unit_test_dftengine.dir/build.make xtp/src/tests/CMakeFiles/unit_test_dftengine.dir/build +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 90%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_dftengine.dir/test_dftengine.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_dftengine.dir/test_dftengine.cc.o -MF CMakeFiles/unit_test_dftengine.dir/test_dftengine.cc.o.d -o CMakeFiles/unit_test_dftengine.dir/test_dftengine.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_dftengine.cc /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here @@ -22059,27 +22098,51 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ -In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:34, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/classicalsegment.h:25, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/eeinteractor.h:25, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/dipoledipoleinteraction.h:23, - from /build/reproducible-path/votca-2022.1/xtp/src/tests/test_eeinteractor.cc:28: -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 81 | loc_ = loc; - | ^~~ -In file included from /usr/include/hdf5/serial/H5Cpp.h:47, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:25: +In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:31: +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 178 | attr = loc.createAttribute(name, *strType, dp); + | ^ +In file included from /usr/include/hdf5/serial/H5Cpp.h:34: +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 180 | attr = loc.openAttribute(name); + | ^ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 278 | parent = loc.createGroup(name); + | ^ +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 280 | parent = loc.openGroup(name); + | ^ +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 294 | parent = loc.createGroup(name); + | ^ +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 296 | parent = loc.openGroup(name); + | ^ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/bse_population.h:25, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/qmfragment.h:26, - from /build/reproducible-path/votca-2022.1/xtp/src/tests/test_qmfragment.cc:27: + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/hist.h:25, + from /build/reproducible-path/votca-2022.1/xtp/src/tests/test_hist.cc:28: /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; @@ -22089,36 +22152,11 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 89%] Built target unit_test_trustregion -make -f xtp/src/tests/CMakeFiles/unit_test_populationanalysis.dir/build.make xtp/src/tests/CMakeFiles/unit_test_populationanalysis.dir/depend -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_populationanalysis.dir/DependInfo.cmake --color= -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/src/tests/CMakeFiles/unit_test_populationanalysis.dir/build.make xtp/src/tests/CMakeFiles/unit_test_populationanalysis.dir/build -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 90%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_populationanalysis.dir/test_populationanalysis.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_populationanalysis.dir/test_populationanalysis.cc.o -MF CMakeFiles/unit_test_populationanalysis.dir/test_populationanalysis.cc.o.d -o CMakeFiles/unit_test_populationanalysis.dir/test_populationanalysis.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_populationanalysis.cc -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 162 | attr = loc.createAttribute(name, *dataType, dp); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 164 | attr = loc.openAttribute(name); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:34, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/classicalsegment.h:25, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/segmentmapper.h:30, - from /build/reproducible-path/votca-2022.1/xtp/src/tests/test_segmentmapper.cc:28: + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/bse_population.h:25, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/qmfragment.h:26, + from /build/reproducible-path/votca-2022.1/xtp/src/tests/test_qmfragment.cc:27: /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; @@ -22169,6 +22207,21 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ +In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:34, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/classicalsegment.h:25, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/segmentmapper.h:30, + from /build/reproducible-path/votca-2022.1/xtp/src/tests/test_segmentmapper.cc:28: +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 81 | loc_ = loc; + | ^~~ +In file included from /usr/include/hdf5/serial/H5Cpp.h:47, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:25: +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] @@ -22224,6 +22277,20 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 162 | attr = loc.createAttribute(name, *dataType, dp); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 164 | attr = loc.openAttribute(name); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = double; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = double; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/bse_population.h:50:6: required from here @@ -22239,6 +22306,61 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 162 | attr = loc.createAttribute(name, *dataType, dp); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 164 | attr = loc.openAttribute(name); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:31: +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 178 | attr = loc.createAttribute(name, *strType, dp); + | ^ +In file included from /usr/include/hdf5/serial/H5Cpp.h:34: +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 180 | attr = loc.openAttribute(name); + | ^ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 278 | parent = loc.createGroup(name); + | ^ +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 280 | parent = loc.openGroup(name); + | ^ +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 294 | parent = loc.createGroup(name); + | ^ +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 296 | parent = loc.openGroup(name); + | ^ +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = double; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = double; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/hist.h:101:4: required from 'void votca::xtp::hist::WriteMetric(const T&, std::string, votca::xtp::CheckpointWriter&) const [with T = double; std::string = std::__cxx11::basic_string]' @@ -22256,6 +22378,27 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ +In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:34, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/classicalsegment.h:25, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/eeinteractor.h:25, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/dipoledipoleinteraction.h:23, + from /build/reproducible-path/votca-2022.1/xtp/src/tests/test_dipoledipoleinteraction.cc:27: +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 81 | loc_ = loc; + | ^~~ +In file included from /usr/include/hdf5/serial/H5Cpp.h:47, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:25: +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ +[ 90%] Linking CXX executable unit_test_grid +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_grid.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_grid.dir/test_grid.cc.o -o unit_test_grid -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so +[ 90%] Linking CXX executable unit_test_sigma_cda +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_sigma_cda.dir/link.txt --verbose=1 In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] @@ -22271,6 +22414,7 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_sigma_cda.dir/test_sigma_cda.cc.o -o unit_test_sigma_cda -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); @@ -22297,6 +22441,20 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 162 | attr = loc.createAttribute(name, *dataType, dp); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 164 | attr = loc.openAttribute(name); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/region.h:30, @@ -22311,8 +22469,68 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ -[ 90%] Linking CXX executable unit_test_sigma_ppm -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_sigma_ppm.dir/link.txt --verbose=1 +[ 90%] Linking CXX executable unit_test_gw +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_gw.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_gw.dir/test_gw.cc.o -o unit_test_gw -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so +[ 90%] Linking CXX executable unit_test_gnode +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_gnode.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_gnode.dir/test_gnode.cc.o -o unit_test_gnode -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so +[ 90%] Built target unit_test_grid +make -f xtp/src/tests/CMakeFiles/unit_test_bsecoupling.dir/build.make xtp/src/tests/CMakeFiles/unit_test_bsecoupling.dir/depend +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_bsecoupling.dir/DependInfo.cmake --color= +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f xtp/src/tests/CMakeFiles/unit_test_bsecoupling.dir/build.make xtp/src/tests/CMakeFiles/unit_test_bsecoupling.dir/build +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 90%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_bsecoupling.dir/test_bsecoupling.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_bsecoupling.dir/test_bsecoupling.cc.o -MF CMakeFiles/unit_test_bsecoupling.dir/test_bsecoupling.cc.o.d -o CMakeFiles/unit_test_bsecoupling.dir/test_bsecoupling.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_bsecoupling.cc +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 90%] Built target unit_test_sigma_cda +make -f xtp/src/tests/CMakeFiles/unit_test_rate_engine.dir/build.make xtp/src/tests/CMakeFiles/unit_test_rate_engine.dir/depend +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_rate_engine.dir/DependInfo.cmake --color= +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f xtp/src/tests/CMakeFiles/unit_test_rate_engine.dir/build.make xtp/src/tests/CMakeFiles/unit_test_rate_engine.dir/build +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 90%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_rate_engine.dir/test_rate_engine.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_rate_engine.dir/test_rate_engine.cc.o -MF CMakeFiles/unit_test_rate_engine.dir/test_rate_engine.cc.o.d -o CMakeFiles/unit_test_rate_engine.dir/test_rate_engine.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_rate_engine.cc +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::StaticSite; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::StaticSite]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 42 | class CptTable { + | ^~~~~~~~ +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] + 42 | class CptTable { + | ^~~~~~~~ +In file included from /usr/include/hdf5/serial/H5Cpp.h:42: +/usr/include/hdf5/serial/H5CompType.h:40:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' + 40 | CompType(const CompType &original); + | ^~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] + 42 | class CptTable { + | ^~~~~~~~ +In file included from /usr/include/hdf5/serial/H5Cpp.h:26: +/usr/include/hdf5/serial/H5DcreatProp.h:137:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' + 137 | DSetCreatPropList(const DSetCreatPropList &orig); + | ^~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5DcreatProp.h:29:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] + 29 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { + | ^~~~~~~~~~~~~~~~~ +In file included from /usr/include/hdf5/serial/H5Cpp.h:25: +/usr/include/hdf5/serial/H5OcreatProp.h:53:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' + 53 | ObjCreatPropList(const ObjCreatPropList &original); + | ^~~~~~~~~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here + 42 | class CptTable { + | ^~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here + 132 | table = CptTable(name, sizeof(typename T::data), loc_); + | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] @@ -22327,12 +22545,10 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ -[ 90%] Linking CXX executable unit_test_sigma_exact -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_sigma_exact.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_sigma_ppm.dir/test_sigma_ppm.cc.o -o unit_test_sigma_ppm -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_sigma_exact.dir/test_sigma_exact.cc.o -o unit_test_sigma_exact -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::StaticSite]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -22345,6 +22561,29 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ +[ 90%] Linking CXX executable unit_test_qmfragment +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_qmfragment.dir/link.txt --verbose=1 +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_qmfragment.dir/test_qmfragment.cc.o -o unit_test_qmfragment -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so +[ 90%] Built target unit_test_gnode +make -f xtp/src/tests/CMakeFiles/unit_test_DeltaQ_filter.dir/build.make xtp/src/tests/CMakeFiles/unit_test_DeltaQ_filter.dir/depend +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_DeltaQ_filter.dir/DependInfo.cmake --color= +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f xtp/src/tests/CMakeFiles/unit_test_DeltaQ_filter.dir/build.make xtp/src/tests/CMakeFiles/unit_test_DeltaQ_filter.dir/build +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 90%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_DeltaQ_filter.dir/test_DeltaQ_filter.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_DeltaQ_filter.dir/test_DeltaQ_filter.cc.o -MF CMakeFiles/unit_test_DeltaQ_filter.dir/test_DeltaQ_filter.cc.o.d -o CMakeFiles/unit_test_DeltaQ_filter.dir/test_DeltaQ_filter.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_DeltaQ_filter.cc +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 90%] Built target unit_test_gw +make -f xtp/src/tests/CMakeFiles/unit_test_oscillatorstrength_filter.dir/build.make xtp/src/tests/CMakeFiles/unit_test_oscillatorstrength_filter.dir/depend +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_oscillatorstrength_filter.dir/DependInfo.cmake --color= +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f xtp/src/tests/CMakeFiles/unit_test_oscillatorstrength_filter.dir/build.make xtp/src/tests/CMakeFiles/unit_test_oscillatorstrength_filter.dir/build +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 90%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_oscillatorstrength_filter.dir/test_oscillatorstrength_filter.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_oscillatorstrength_filter.dir/test_oscillatorstrength_filter.cc.o -MF CMakeFiles/unit_test_oscillatorstrength_filter.dir/test_oscillatorstrength_filter.cc.o.d -o CMakeFiles/unit_test_oscillatorstrength_filter.dir/test_oscillatorstrength_filter.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_oscillatorstrength_filter.cc In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] @@ -22386,11 +22625,6 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 90%] Built target unit_test_sigma_ppm -make -f xtp/src/tests/CMakeFiles/unit_test_orca.dir/build.make xtp/src/tests/CMakeFiles/unit_test_orca.dir/depend -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_orca.dir/DependInfo.cmake --color= /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] @@ -22406,29 +22640,15 @@ 32 | Attribute(const Attribute &original); | ^~~~~~~~~ make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/src/tests/CMakeFiles/unit_test_orca.dir/build.make xtp/src/tests/CMakeFiles/unit_test_orca.dir/build -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 90%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_orca.dir/test_orca.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_orca.dir/test_orca.cc.o -MF CMakeFiles/unit_test_orca.dir/test_orca.cc.o.d -o CMakeFiles/unit_test_orca.dir/test_orca.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_orca.cc -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 90%] Built target unit_test_sigma_exact -make -f xtp/src/tests/CMakeFiles/unit_test_dftengine.dir/build.make xtp/src/tests/CMakeFiles/unit_test_dftengine.dir/depend +[ 90%] Built target unit_test_qmfragment +make -f xtp/src/tests/CMakeFiles/unit_test_localisation_filter.dir/build.make xtp/src/tests/CMakeFiles/unit_test_localisation_filter.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_dftengine.dir/DependInfo.cmake --color= +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_localisation_filter.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/src/tests/CMakeFiles/unit_test_dftengine.dir/build.make xtp/src/tests/CMakeFiles/unit_test_dftengine.dir/build +make -f xtp/src/tests/CMakeFiles/unit_test_localisation_filter.dir/build.make xtp/src/tests/CMakeFiles/unit_test_localisation_filter.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 90%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_dftengine.dir/test_dftengine.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_dftengine.dir/test_dftengine.cc.o -MF CMakeFiles/unit_test_dftengine.dir/test_dftengine.cc.o.d -o CMakeFiles/unit_test_dftengine.dir/test_dftengine.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_dftengine.cc -[ 90%] Linking CXX executable unit_test_sigma_cda -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_sigma_cda.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_sigma_cda.dir/test_sigma_cda.cc.o -o unit_test_sigma_cda -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so -[ 90%] Linking CXX executable unit_test_qmfragment -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_qmfragment.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_qmfragment.dir/test_qmfragment.cc.o -o unit_test_qmfragment -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so -[ 90%] Linking CXX executable unit_test_ppm -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_ppm.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_ppm.dir/test_ppm.cc.o -o unit_test_ppm -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so +[ 90%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_localisation_filter.dir/test_localisation_filter.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_localisation_filter.dir/test_localisation_filter.cc.o -MF CMakeFiles/unit_test_localisation_filter.dir/test_localisation_filter.cc.o.d -o CMakeFiles/unit_test_localisation_filter.dir/test_localisation_filter.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_localisation_filter.cc /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::Atom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::Atom]' /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here @@ -22481,34 +22701,11 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 90%] Built target unit_test_qmfragment -make -f xtp/src/tests/CMakeFiles/unit_test_bsecoupling.dir/build.make xtp/src/tests/CMakeFiles/unit_test_bsecoupling.dir/depend -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_bsecoupling.dir/DependInfo.cmake --color= -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/src/tests/CMakeFiles/unit_test_bsecoupling.dir/build.make xtp/src/tests/CMakeFiles/unit_test_bsecoupling.dir/build -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 90%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_bsecoupling.dir/test_bsecoupling.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_bsecoupling.dir/test_bsecoupling.cc.o -MF CMakeFiles/unit_test_bsecoupling.dir/test_bsecoupling.cc.o.d -o CMakeFiles/unit_test_bsecoupling.dir/test_bsecoupling.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_bsecoupling.cc -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 90%] Built target unit_test_sigma_cda -make -f xtp/src/tests/CMakeFiles/unit_test_rate_engine.dir/build.make xtp/src/tests/CMakeFiles/unit_test_rate_engine.dir/depend -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_rate_engine.dir/DependInfo.cmake --color= -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/src/tests/CMakeFiles/unit_test_rate_engine.dir/build.make xtp/src/tests/CMakeFiles/unit_test_rate_engine.dir/build -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 90%] Linking CXX executable unit_test_grid -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_grid.dir/link.txt --verbose=1 -[ 90%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_rate_engine.dir/test_rate_engine.cc.o In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:34, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/classicalsegment.h:25, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/eeinteractor.h:25, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/dipoledipoleinteraction.h:23, - from /build/reproducible-path/votca-2022.1/xtp/src/tests/test_dipoledipoleinteraction.cc:27: + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/orbitals.h:31, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/populationanalysis.h:26, + from /build/reproducible-path/votca-2022.1/xtp/src/tests/test_populationanalysis.cc:32: /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; @@ -22518,10 +22715,8 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_grid.dir/test_grid.cc.o -o unit_test_grid -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_rate_engine.dir/test_rate_engine.cc.o -MF CMakeFiles/unit_test_rate_engine.dir/test_rate_engine.cc.o.d -o CMakeFiles/unit_test_rate_engine.dir/test_rate_engine.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_rate_engine.cc -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::Atom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::Atom]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::PolarSite; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::PolarSite]' /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { @@ -22558,7 +22753,7 @@ | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::Atom]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::PolarSite]' /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); @@ -22572,19 +22767,6 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ -[ 90%] Linking CXX executable unit_test_gw -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_gw.dir/link.txt --verbose=1 -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_gw.dir/test_gw.cc.o -o unit_test_gw -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so -[ 90%] Built target unit_test_ppm -make -f xtp/src/tests/CMakeFiles/unit_test_DeltaQ_filter.dir/build.make xtp/src/tests/CMakeFiles/unit_test_DeltaQ_filter.dir/depend -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_DeltaQ_filter.dir/DependInfo.cmake --color= -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/src/tests/CMakeFiles/unit_test_DeltaQ_filter.dir/build.make xtp/src/tests/CMakeFiles/unit_test_DeltaQ_filter.dir/build -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 90%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_DeltaQ_filter.dir/test_DeltaQ_filter.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_DeltaQ_filter.dir/test_DeltaQ_filter.cc.o -MF CMakeFiles/unit_test_DeltaQ_filter.dir/test_DeltaQ_filter.cc.o.d -o CMakeFiles/unit_test_DeltaQ_filter.dir/test_DeltaQ_filter.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_DeltaQ_filter.cc In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] @@ -22626,28 +22808,8 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 90%] Built target unit_test_grid -make -f xtp/src/tests/CMakeFiles/unit_test_oscillatorstrength_filter.dir/build.make xtp/src/tests/CMakeFiles/unit_test_oscillatorstrength_filter.dir/depend -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_oscillatorstrength_filter.dir/DependInfo.cmake --color= -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/src/tests/CMakeFiles/unit_test_oscillatorstrength_filter.dir/build.make xtp/src/tests/CMakeFiles/unit_test_oscillatorstrength_filter.dir/build -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 90%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_oscillatorstrength_filter.dir/test_oscillatorstrength_filter.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_oscillatorstrength_filter.dir/test_oscillatorstrength_filter.cc.o -MF CMakeFiles/unit_test_oscillatorstrength_filter.dir/test_oscillatorstrength_filter.cc.o.d -o CMakeFiles/unit_test_oscillatorstrength_filter.dir/test_oscillatorstrength_filter.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_oscillatorstrength_filter.cc -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 90%] Built target unit_test_gw -make -f xtp/src/tests/CMakeFiles/unit_test_localisation_filter.dir/build.make xtp/src/tests/CMakeFiles/unit_test_localisation_filter.dir/depend -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_localisation_filter.dir/DependInfo.cmake --color= -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/src/tests/CMakeFiles/unit_test_localisation_filter.dir/build.make xtp/src/tests/CMakeFiles/unit_test_localisation_filter.dir/build -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 90%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_localisation_filter.dir/test_localisation_filter.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_localisation_filter.dir/test_localisation_filter.cc.o -MF CMakeFiles/unit_test_localisation_filter.dir/test_localisation_filter.cc.o.d -o CMakeFiles/unit_test_localisation_filter.dir/test_localisation_filter.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_localisation_filter.cc -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::StaticSite; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::StaticSite]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::Atom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::Atom]' /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { @@ -22684,7 +22846,7 @@ | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::StaticSite]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::Atom]' /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); @@ -22698,6 +22860,9 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ +[ 90%] Linking CXX executable unit_test_bse_operator +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_bse_operator.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_bse_operator.dir/test_bse_operator.cc.o -o unit_test_bse_operator -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] @@ -22712,98 +22877,12 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ -[ 90%] Linking CXX executable unit_test_gnode -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_gnode.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_gnode.dir/test_gnode.cc.o -o unit_test_gnode -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so -[ 90%] Linking CXX executable unit_test_bse_operator -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_bse_operator.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_bse_operator.dir/test_bse_operator.cc.o -o unit_test_bse_operator -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 90%] Built target unit_test_gnode -make -f xtp/src/tests/CMakeFiles/unit_test_density_filter.dir/build.make xtp/src/tests/CMakeFiles/unit_test_density_filter.dir/depend -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_density_filter.dir/DependInfo.cmake --color= -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/src/tests/CMakeFiles/unit_test_density_filter.dir/build.make xtp/src/tests/CMakeFiles/unit_test_density_filter.dir/build -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 90%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_density_filter.dir/test_density_filter.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_density_filter.dir/test_density_filter.cc.o -MF CMakeFiles/unit_test_density_filter.dir/test_density_filter.cc.o.d -o CMakeFiles/unit_test_density_filter.dir/test_density_filter.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_density_filter.cc -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 90%] Built target unit_test_bse_operator -make -f xtp/src/tests/CMakeFiles/unit_test_overlap_filter.dir/build.make xtp/src/tests/CMakeFiles/unit_test_overlap_filter.dir/depend -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_overlap_filter.dir/DependInfo.cmake --color= -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/src/tests/CMakeFiles/unit_test_overlap_filter.dir/build.make xtp/src/tests/CMakeFiles/unit_test_overlap_filter.dir/build -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 90%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_overlap_filter.dir/test_overlap_filter.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_overlap_filter.dir/test_overlap_filter.cc.o -MF CMakeFiles/unit_test_overlap_filter.dir/test_overlap_filter.cc.o.d -o CMakeFiles/unit_test_overlap_filter.dir/test_overlap_filter.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_overlap_filter.cc [ 90%] Linking CXX executable unit_test_hist cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_hist.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_hist.dir/test_hist.cc.o -o unit_test_hist -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 90%] Built target unit_test_hist -make -f xtp/src/tests/CMakeFiles/unit_test_newton_rapson.dir/build.make xtp/src/tests/CMakeFiles/unit_test_newton_rapson.dir/depend -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_newton_rapson.dir/DependInfo.cmake --color= -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/src/tests/CMakeFiles/unit_test_newton_rapson.dir/build.make xtp/src/tests/CMakeFiles/unit_test_newton_rapson.dir/build -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 90%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_newton_rapson.dir/test_newton_rapson.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_newton_rapson.dir/test_newton_rapson.cc.o -MF CMakeFiles/unit_test_newton_rapson.dir/test_newton_rapson.cc.o.d -o CMakeFiles/unit_test_newton_rapson.dir/test_newton_rapson.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_newton_rapson.cc -[ 90%] Linking CXX executable unit_test_jobtopology -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_jobtopology.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_jobtopology.dir/test_jobtopology.cc.o -o unit_test_jobtopology -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 90%] Built target unit_test_jobtopology -make -f xtp/src/tests/CMakeFiles/unit_test_indexparser.dir/build.make xtp/src/tests/CMakeFiles/unit_test_indexparser.dir/depend -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_indexparser.dir/DependInfo.cmake --color= -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/src/tests/CMakeFiles/unit_test_indexparser.dir/build.make xtp/src/tests/CMakeFiles/unit_test_indexparser.dir/build -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 90%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_indexparser.dir/test_indexparser.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_indexparser.dir/test_indexparser.cc.o -MF CMakeFiles/unit_test_indexparser.dir/test_indexparser.cc.o.d -o CMakeFiles/unit_test_indexparser.dir/test_indexparser.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_indexparser.cc -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::PolarSite; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::PolarSite]' -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 42 | class CptTable { - | ^~~~~~~~ -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] - 42 | class CptTable { - | ^~~~~~~~ -In file included from /usr/include/hdf5/serial/H5Cpp.h:42: -/usr/include/hdf5/serial/H5CompType.h:40:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' - 40 | CompType(const CompType &original); - | ^~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] - 42 | class CptTable { - | ^~~~~~~~ -In file included from /usr/include/hdf5/serial/H5Cpp.h:26: -/usr/include/hdf5/serial/H5DcreatProp.h:137:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' - 137 | DSetCreatPropList(const DSetCreatPropList &orig); - | ^~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5DcreatProp.h:29:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] - 29 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { - | ^~~~~~~~~~~~~~~~~ -In file included from /usr/include/hdf5/serial/H5Cpp.h:25: -/usr/include/hdf5/serial/H5OcreatProp.h:53:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' - 53 | ObjCreatPropList(const ObjCreatPropList &original); - | ^~~~~~~~~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here - 42 | class CptTable { - | ^~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here - 132 | table = CptTable(name, sizeof(typename T::data), loc_); - | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::PolarSite]' -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = double; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = double; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/bse_population.h:50:6: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -22816,11 +22895,34 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 90%] Built target unit_test_bse_operator +make -f xtp/src/tests/CMakeFiles/unit_test_density_filter.dir/build.make xtp/src/tests/CMakeFiles/unit_test_density_filter.dir/depend +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_density_filter.dir/DependInfo.cmake --color= +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f xtp/src/tests/CMakeFiles/unit_test_density_filter.dir/build.make xtp/src/tests/CMakeFiles/unit_test_density_filter.dir/build +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 90%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_density_filter.dir/test_density_filter.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_density_filter.dir/test_density_filter.cc.o -MF CMakeFiles/unit_test_density_filter.dir/test_density_filter.cc.o.d -o CMakeFiles/unit_test_density_filter.dir/test_density_filter.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_density_filter.cc In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/orbitals.h:31, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/populationanalysis.h:26, - from /build/reproducible-path/votca-2022.1/xtp/src/tests/test_populationanalysis.cc:32: + from /build/reproducible-path/votca-2022.1/xtp/src/tests/test_orca.cc:30: +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 81 | loc_ = loc; + | ^~~ +In file included from /usr/include/hdf5/serial/H5Cpp.h:47, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:25: +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ +In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/ecpaobasis.h:24, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/dftengine.h:30, + from /build/reproducible-path/votca-2022.1/xtp/src/tests/test_dftengine.cc:28: /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; @@ -22871,6 +22973,57 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 90%] Built target unit_test_hist +make -f xtp/src/tests/CMakeFiles/unit_test_overlap_filter.dir/build.make xtp/src/tests/CMakeFiles/unit_test_overlap_filter.dir/depend +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_overlap_filter.dir/DependInfo.cmake --color= +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f xtp/src/tests/CMakeFiles/unit_test_overlap_filter.dir/build.make xtp/src/tests/CMakeFiles/unit_test_overlap_filter.dir/build +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:31: +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 178 | attr = loc.createAttribute(name, *strType, dp); + | ^ +In file included from /usr/include/hdf5/serial/H5Cpp.h:34: +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 180 | attr = loc.openAttribute(name); + | ^ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +[ 90%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_overlap_filter.dir/test_overlap_filter.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_overlap_filter.dir/test_overlap_filter.cc.o -MF CMakeFiles/unit_test_overlap_filter.dir/test_overlap_filter.cc.o.d -o CMakeFiles/unit_test_overlap_filter.dir/test_overlap_filter.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_overlap_filter.cc +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 278 | parent = loc.createGroup(name); + | ^ +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 280 | parent = loc.openGroup(name); + | ^ +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 294 | parent = loc.createGroup(name); + | ^ +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 296 | parent = loc.openGroup(name); + | ^ +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] @@ -22885,9 +23038,8 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = double; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = double; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/bse_population.h:50:6: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -22957,6 +23109,58 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 42 | class CptTable { + | ^~~~~~~~ +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] + 42 | class CptTable { + | ^~~~~~~~ +In file included from /usr/include/hdf5/serial/H5Cpp.h:42: +/usr/include/hdf5/serial/H5CompType.h:40:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' + 40 | CompType(const CompType &original); + | ^~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] + 42 | class CptTable { + | ^~~~~~~~ +In file included from /usr/include/hdf5/serial/H5Cpp.h:26: +/usr/include/hdf5/serial/H5DcreatProp.h:137:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' + 137 | DSetCreatPropList(const DSetCreatPropList &orig); + | ^~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5DcreatProp.h:29:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] + 29 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { + | ^~~~~~~~~~~~~~~~~ +In file included from /usr/include/hdf5/serial/H5Cpp.h:25: +/usr/include/hdf5/serial/H5OcreatProp.h:53:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' + 53 | ObjCreatPropList(const ObjCreatPropList &original); + | ^~~~~~~~~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here + 42 | class CptTable { + | ^~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here + 132 | table = CptTable(name, sizeof(typename T::data), loc_); + | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 162 | attr = loc.createAttribute(name, *dataType, dp); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 164 | attr = loc.openAttribute(name); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] @@ -23023,62 +23227,11 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ -In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/orbitals.h:31, - from /build/reproducible-path/votca-2022.1/xtp/src/tests/test_orca.cc:30: -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 81 | loc_ = loc; - | ^~~ -In file included from /usr/include/hdf5/serial/H5Cpp.h:47, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:25: -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ -In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:31: -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 178 | attr = loc.createAttribute(name, *strType, dp); - | ^ -In file included from /usr/include/hdf5/serial/H5Cpp.h:34: -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 180 | attr = loc.openAttribute(name); - | ^ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 278 | parent = loc.createGroup(name); - | ^ -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 280 | parent = loc.openGroup(name); - | ^ -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 294 | parent = loc.createGroup(name); - | ^ -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 296 | parent = loc.openGroup(name); - | ^ -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' +[ 90%] Linking CXX executable unit_test_jobtopology +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_jobtopology.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_jobtopology.dir/test_jobtopology.cc.o -o unit_test_jobtopology -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::StaticSite; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::StaticSite]' /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { @@ -23115,7 +23268,7 @@ | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::StaticSite]' /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); @@ -23131,9 +23284,10 @@ | ^~~~~~~~~ In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/ecpaobasis.h:24, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/dftengine.h:30, - from /build/reproducible-path/votca-2022.1/xtp/src/tests/test_dftengine.cc:28: + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/orbitals.h:31, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/statefilter_base.h:33, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/filterfactory.h:28, + from /build/reproducible-path/votca-2022.1/xtp/src/tests/test_oscillatorstrength_filter.cc:30: /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; @@ -23184,6 +23338,16 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 90%] Built target unit_test_jobtopology +make -f xtp/src/tests/CMakeFiles/unit_test_newton_rapson.dir/build.make xtp/src/tests/CMakeFiles/unit_test_newton_rapson.dir/depend +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_newton_rapson.dir/DependInfo.cmake --color= +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f xtp/src/tests/CMakeFiles/unit_test_newton_rapson.dir/build.make xtp/src/tests/CMakeFiles/unit_test_newton_rapson.dir/build +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 90%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_newton_rapson.dir/test_newton_rapson.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_newton_rapson.dir/test_newton_rapson.cc.o -MF CMakeFiles/unit_test_newton_rapson.dir/test_newton_rapson.cc.o.d -o CMakeFiles/unit_test_newton_rapson.dir/test_newton_rapson.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_newton_rapson.cc /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] @@ -23254,82 +23418,46 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ -In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/orbitals.h:31, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/statefilter_base.h:33, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/filterfactory.h:28, - from /build/reproducible-path/votca-2022.1/xtp/src/tests/test_oscillatorstrength_filter.cc:30: -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 81 | loc_ = loc; - | ^~~ -In file included from /usr/include/hdf5/serial/H5Cpp.h:47, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:25: -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ -In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:31: -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 178 | attr = loc.createAttribute(name, *strType, dp); - | ^ -In file included from /usr/include/hdf5/serial/H5Cpp.h:34: -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 180 | attr = loc.openAttribute(name); - | ^ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -[ 90%] Linking CXX executable unit_test_segmentmapper -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_segmentmapper.dir/link.txt --verbose=1 -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 278 | parent = loc.createGroup(name); - | ^ -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 280 | parent = loc.openGroup(name); - | ^ -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 294 | parent = loc.createGroup(name); - | ^ -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 296 | parent = loc.openGroup(name); - | ^ -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_segmentmapper.dir/test_segmentmapper.cc.o -o unit_test_segmentmapper -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so -In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/orbitals.h:31, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/statefilter_base.h:33, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/filterfactory.h:28, - from /build/reproducible-path/votca-2022.1/xtp/src/tests/test_DeltaQ_filter.cc:28: -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 81 | loc_ = loc; - | ^~~ -In file included from /usr/include/hdf5/serial/H5Cpp.h:47, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:25: +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 42 | class CptTable { + | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] + 42 | class CptTable { + | ^~~~~~~~ +In file included from /usr/include/hdf5/serial/H5Cpp.h:42: +/usr/include/hdf5/serial/H5CompType.h:40:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' + 40 | CompType(const CompType &original); + | ^~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] + 42 | class CptTable { + | ^~~~~~~~ +In file included from /usr/include/hdf5/serial/H5Cpp.h:26: +/usr/include/hdf5/serial/H5DcreatProp.h:137:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' + 137 | DSetCreatPropList(const DSetCreatPropList &orig); + | ^~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5DcreatProp.h:29:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] + 29 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { + | ^~~~~~~~~~~~~~~~~ +In file included from /usr/include/hdf5/serial/H5Cpp.h:25: +/usr/include/hdf5/serial/H5OcreatProp.h:53:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' + 53 | ObjCreatPropList(const ObjCreatPropList &original); + | ^~~~~~~~~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here + 42 | class CptTable { + | ^~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here + 132 | table = CptTable(name, sizeof(typename T::data), loc_); + | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -23342,18 +23470,6 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ -In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:31: -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 178 | attr = loc.createAttribute(name, *strType, dp); - | ^ -In file included from /usr/include/hdf5/serial/H5Cpp.h:34: -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 180 | attr = loc.openAttribute(name); - | ^ /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] @@ -23368,44 +23484,63 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 278 | parent = loc.createGroup(name); - | ^ -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 280 | parent = loc.openGroup(name); - | ^ -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 294 | parent = loc.createGroup(name); - | ^ -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 296 | parent = loc.openGroup(name); - | ^ -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ +[ 90%] Linking CXX executable unit_test_rate_engine +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_rate_engine.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_rate_engine.dir/test_rate_engine.cc.o -o unit_test_rate_engine -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so +[ 90%] Linking CXX executable unit_test_dipoledipoleinteraction +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_dipoledipoleinteraction.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_dipoledipoleinteraction.dir/test_dipoledipoleinteraction.cc.o -o unit_test_dipoledipoleinteraction -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 90%] Built target unit_test_segmentmapper -make -f xtp/src/tests/CMakeFiles/unit_test_orbreorder.dir/build.make xtp/src/tests/CMakeFiles/unit_test_orbreorder.dir/depend +[ 90%] Built target unit_test_rate_engine +make -f xtp/src/tests/CMakeFiles/unit_test_indexparser.dir/build.make xtp/src/tests/CMakeFiles/unit_test_indexparser.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_orbreorder.dir/DependInfo.cmake --color= +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_indexparser.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/src/tests/CMakeFiles/unit_test_orbreorder.dir/build.make xtp/src/tests/CMakeFiles/unit_test_orbreorder.dir/build -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here +make -f xtp/src/tests/CMakeFiles/unit_test_indexparser.dir/build.make xtp/src/tests/CMakeFiles/unit_test_indexparser.dir/build +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 90%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_indexparser.dir/test_indexparser.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_indexparser.dir/test_indexparser.cc.o -MF CMakeFiles/unit_test_indexparser.dir/test_indexparser.cc.o.d -o CMakeFiles/unit_test_indexparser.dir/test_indexparser.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_indexparser.cc +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 42 | class CptTable { + | ^~~~~~~~ +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] + 42 | class CptTable { + | ^~~~~~~~ +In file included from /usr/include/hdf5/serial/H5Cpp.h:42: +/usr/include/hdf5/serial/H5CompType.h:40:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' + 40 | CompType(const CompType &original); + | ^~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] + 42 | class CptTable { + | ^~~~~~~~ +In file included from /usr/include/hdf5/serial/H5Cpp.h:26: +/usr/include/hdf5/serial/H5DcreatProp.h:137:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' + 137 | DSetCreatPropList(const DSetCreatPropList &orig); + | ^~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5DcreatProp.h:29:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] + 29 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { + | ^~~~~~~~~~~~~~~~~ +In file included from /usr/include/hdf5/serial/H5Cpp.h:25: +/usr/include/hdf5/serial/H5OcreatProp.h:53:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' + 53 | ObjCreatPropList(const ObjCreatPropList &original); + | ^~~~~~~~~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here + 42 | class CptTable { + | ^~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here + 132 | table = CptTable(name, sizeof(typename T::data), loc_); + | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -23418,6 +23553,12 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ +[ 90%] Built target unit_test_dipoledipoleinteraction +make -f xtp/src/tests/CMakeFiles/unit_test_orbreorder.dir/build.make xtp/src/tests/CMakeFiles/unit_test_orbreorder.dir/depend +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_orbreorder.dir/DependInfo.cmake --color= +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f xtp/src/tests/CMakeFiles/unit_test_orbreorder.dir/build.make xtp/src/tests/CMakeFiles/unit_test_orbreorder.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' [ 91%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_orbreorder.dir/test_orbreorder.cc.o cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_orbreorder.dir/test_orbreorder.cc.o -MF CMakeFiles/unit_test_orbreorder.dir/test_orbreorder.cc.o.d -o CMakeFiles/unit_test_orbreorder.dir/test_orbreorder.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_orbreorder.cc @@ -23477,40 +23618,12 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 162 | attr = loc.createAttribute(name, *dataType, dp); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 164 | attr = loc.openAttribute(name); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 162 | attr = loc.createAttribute(name, *dataType, dp); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 164 | attr = loc.openAttribute(name); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/orbitals.h:31, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/statefilter_base.h:33, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/filterfactory.h:28, - from /build/reproducible-path/votca-2022.1/xtp/src/tests/test_overlap_filter.cc:27: + from /build/reproducible-path/votca-2022.1/xtp/src/tests/test_DeltaQ_filter.cc:28: /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; @@ -23535,25 +23648,6 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::StaticSite; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::StaticSite]' -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 42 | class CptTable { - | ^~~~~~~~ -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] - 42 | class CptTable { - | ^~~~~~~~ -In file included from /usr/include/hdf5/serial/H5Cpp.h:42: -/usr/include/hdf5/serial/H5CompType.h:40:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' - 40 | CompType(const CompType &original); - | ^~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] - 42 | class CptTable { - | ^~~~~~~~ /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); @@ -23567,23 +23661,6 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ -In file included from /usr/include/hdf5/serial/H5Cpp.h:26: -/usr/include/hdf5/serial/H5DcreatProp.h:137:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' - 137 | DSetCreatPropList(const DSetCreatPropList &orig); - | ^~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5DcreatProp.h:29:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] - 29 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { - | ^~~~~~~~~~~~~~~~~ -In file included from /usr/include/hdf5/serial/H5Cpp.h:25: -/usr/include/hdf5/serial/H5OcreatProp.h:53:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' - 53 | ObjCreatPropList(const ObjCreatPropList &original); - | ^~~~~~~~~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here - 42 | class CptTable { - | ^~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here - 132 | table = CptTable(name, sizeof(typename T::data), loc_); - | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); @@ -23597,10 +23674,8 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::StaticSite]' -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -23613,78 +23688,20 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ -[ 91%] Linking CXX executable unit_test_rate_engine -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_rate_engine.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_rate_engine.dir/test_rate_engine.cc.o -o unit_test_rate_engine -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so -[ 91%] Linking CXX executable unit_test_newton_rapson -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_newton_rapson.dir/link.txt --verbose=1 -In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/orbitals.h:31, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/statefilter_base.h:33, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/filterfactory.h:28, - from /build/reproducible-path/votca-2022.1/xtp/src/tests/test_density_filter.cc:27: -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 81 | loc_ = loc; - | ^~~ -In file included from /usr/include/hdf5/serial/H5Cpp.h:47, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:25: -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_newton_rapson.dir/test_newton_rapson.cc.o -o unit_test_newton_rapson -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so -In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:31: -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 178 | attr = loc.createAttribute(name, *strType, dp); - | ^ -In file included from /usr/include/hdf5/serial/H5Cpp.h:34: +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 162 | attr = loc.createAttribute(name, *dataType, dp); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 180 | attr = loc.openAttribute(name); - | ^ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 164 | attr = loc.openAttribute(name); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 278 | parent = loc.createGroup(name); - | ^ -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 280 | parent = loc.openGroup(name); - | ^ -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 294 | parent = loc.createGroup(name); - | ^ -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 296 | parent = loc.openGroup(name); - | ^ -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 91%] Built target unit_test_newton_rapson -[ 91%] Built target unit_test_rate_engine -make -f xtp/src/tests/CMakeFiles/unit_test_molden.dir/build.make xtp/src/tests/CMakeFiles/unit_test_molden.dir/depend -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/src/tests/CMakeFiles/unit_test_gaussianwriter.dir/build.make xtp/src/tests/CMakeFiles/unit_test_gaussianwriter.dir/depend -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_molden.dir/DependInfo.cmake --color= -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_gaussianwriter.dir/DependInfo.cmake --color= /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here @@ -23728,57 +23745,6 @@ /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/src/tests/CMakeFiles/unit_test_molden.dir/build.make xtp/src/tests/CMakeFiles/unit_test_molden.dir/build -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 164 | attr = loc.openAttribute(name); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 91%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_molden.dir/test_molden.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_molden.dir/test_molden.cc.o -MF CMakeFiles/unit_test_molden.dir/test_molden.cc.o.d -o CMakeFiles/unit_test_molden.dir/test_molden.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_molden.cc -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/src/tests/CMakeFiles/unit_test_gaussianwriter.dir/build.make xtp/src/tests/CMakeFiles/unit_test_gaussianwriter.dir/build -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 91%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_gaussianwriter.dir/test_gaussianwriter.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_gaussianwriter.dir/test_gaussianwriter.cc.o -MF CMakeFiles/unit_test_gaussianwriter.dir/test_gaussianwriter.cc.o.d -o CMakeFiles/unit_test_gaussianwriter.dir/test_gaussianwriter.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_gaussianwriter.cc -[ 91%] Linking CXX executable unit_test_indexparser -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_indexparser.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_indexparser.dir/test_indexparser.cc.o -o unit_test_indexparser -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 162 | attr = loc.createAttribute(name, *dataType, dp); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 164 | attr = loc.openAttribute(name); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 91%] Built target unit_test_indexparser -make -f xtp/src/tests/CMakeFiles/unit_test_incrementalfockbuilder.dir/build.make xtp/src/tests/CMakeFiles/unit_test_incrementalfockbuilder.dir/depend -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_incrementalfockbuilder.dir/DependInfo.cmake --color= -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/src/tests/CMakeFiles/unit_test_incrementalfockbuilder.dir/build.make xtp/src/tests/CMakeFiles/unit_test_incrementalfockbuilder.dir/build -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 93%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_incrementalfockbuilder.dir/test_incrementalfockbuilder.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_incrementalfockbuilder.dir/test_incrementalfockbuilder.cc.o -MF CMakeFiles/unit_test_incrementalfockbuilder.dir/test_incrementalfockbuilder.cc.o.d -o CMakeFiles/unit_test_incrementalfockbuilder.dir/test_incrementalfockbuilder.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_incrementalfockbuilder.cc -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 162 | attr = loc.createAttribute(name, *dataType, dp); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ @@ -23788,9 +23754,9 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ -[ 93%] Linking CXX executable unit_test_dipoledipoleinteraction -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_dipoledipoleinteraction.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_dipoledipoleinteraction.dir/test_dipoledipoleinteraction.cc.o -o unit_test_dipoledipoleinteraction -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so +[ 91%] Linking CXX executable unit_test_segmentmapper +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_segmentmapper.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_segmentmapper.dir/test_segmentmapper.cc.o -o unit_test_segmentmapper -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here @@ -23844,15 +23810,18 @@ 32 | Attribute(const Attribute &original); | ^~~~~~~~~ make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 93%] Built target unit_test_dipoledipoleinteraction -make -f xtp/src/tests/CMakeFiles/unit_test_parallelism.dir/build.make xtp/src/tests/CMakeFiles/unit_test_parallelism.dir/depend +[ 93%] Linking CXX executable unit_test_eeinteractor +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_eeinteractor.dir/link.txt --verbose=1 +[ 93%] Built target unit_test_segmentmapper +make -f xtp/src/tests/CMakeFiles/unit_test_molden.dir/build.make xtp/src/tests/CMakeFiles/unit_test_molden.dir/depend +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_eeinteractor.dir/test_eeinteractor.cc.o -o unit_test_eeinteractor -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_parallelism.dir/DependInfo.cmake --color= +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_molden.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/src/tests/CMakeFiles/unit_test_parallelism.dir/build.make xtp/src/tests/CMakeFiles/unit_test_parallelism.dir/build +make -f xtp/src/tests/CMakeFiles/unit_test_molden.dir/build.make xtp/src/tests/CMakeFiles/unit_test_molden.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 94%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_parallelism.dir/test_parallelism.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_parallelism.dir/test_parallelism.cc.o -MF CMakeFiles/unit_test_parallelism.dir/test_parallelism.cc.o.d -o CMakeFiles/unit_test_parallelism.dir/test_parallelism.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_parallelism.cc +[ 93%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_molden.dir/test_molden.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_molden.dir/test_molden.cc.o -MF CMakeFiles/unit_test_molden.dir/test_molden.cc.o.d -o CMakeFiles/unit_test_molden.dir/test_molden.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_molden.cc /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here @@ -23905,46 +23874,133 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 42 | class CptTable { - | ^~~~~~~~ +In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/orbitals.h:31, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/statefilter_base.h:33, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/filterfactory.h:28, + from /build/reproducible-path/votca-2022.1/xtp/src/tests/test_density_filter.cc:27: +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 81 | loc_ = loc; + | ^~~ +In file included from /usr/include/hdf5/serial/H5Cpp.h:47, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] - 42 | class CptTable { - | ^~~~~~~~ -In file included from /usr/include/hdf5/serial/H5Cpp.h:42: -/usr/include/hdf5/serial/H5CompType.h:40:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' - 40 | CompType(const CompType &original); - | ^~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] - 42 | class CptTable { - | ^~~~~~~~ -In file included from /usr/include/hdf5/serial/H5Cpp.h:26: -/usr/include/hdf5/serial/H5DcreatProp.h:137:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' - 137 | DSetCreatPropList(const DSetCreatPropList &orig); - | ^~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5DcreatProp.h:29:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] - 29 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { - | ^~~~~~~~~~~~~~~~~ -In file included from /usr/include/hdf5/serial/H5Cpp.h:25: -/usr/include/hdf5/serial/H5OcreatProp.h:53:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' - 53 | ObjCreatPropList(const ObjCreatPropList &original); - | ^~~~~~~~~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here - 42 | class CptTable { - | ^~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here - 132 | table = CptTable(name, sizeof(typename T::data), loc_); - | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here +In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/orbitals.h:31, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/statefilter_base.h:33, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/filterfactory.h:28, + from /build/reproducible-path/votca-2022.1/xtp/src/tests/test_overlap_filter.cc:27: +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 81 | loc_ = loc; + | ^~~ +In file included from /usr/include/hdf5/serial/H5Cpp.h:47, + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:25: +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ +In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:31: +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 178 | attr = loc.createAttribute(name, *strType, dp); + | ^ +In file included from /usr/include/hdf5/serial/H5Cpp.h:34: +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 180 | attr = loc.openAttribute(name); + | ^ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 278 | parent = loc.createGroup(name); + | ^ +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 280 | parent = loc.openGroup(name); + | ^ +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 294 | parent = loc.createGroup(name); + | ^ +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 296 | parent = loc.openGroup(name); + | ^ +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ +In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:31: +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 178 | attr = loc.createAttribute(name, *strType, dp); + | ^ +In file included from /usr/include/hdf5/serial/H5Cpp.h:34: +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 180 | attr = loc.openAttribute(name); + | ^ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 278 | parent = loc.createGroup(name); + | ^ +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 280 | parent = loc.openGroup(name); + | ^ +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 294 | parent = loc.createGroup(name); + | ^ +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 296 | parent = loc.openGroup(name); + | ^ +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 93%] Linking CXX executable unit_test_populationanalysis +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_populationanalysis.dir/link.txt --verbose=1 +[ 93%] Built target unit_test_eeinteractor +make -f xtp/src/tests/CMakeFiles/unit_test_gaussianwriter.dir/build.make xtp/src/tests/CMakeFiles/unit_test_gaussianwriter.dir/depend +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_gaussianwriter.dir/DependInfo.cmake --color= +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_populationanalysis.dir/test_populationanalysis.cc.o -o unit_test_populationanalysis -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f xtp/src/tests/CMakeFiles/unit_test_gaussianwriter.dir/build.make xtp/src/tests/CMakeFiles/unit_test_gaussianwriter.dir/build +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 93%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_gaussianwriter.dir/test_gaussianwriter.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_gaussianwriter.dir/test_gaussianwriter.cc.o -MF CMakeFiles/unit_test_gaussianwriter.dir/test_gaussianwriter.cc.o.d -o CMakeFiles/unit_test_gaussianwriter.dir/test_gaussianwriter.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_gaussianwriter.cc +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -23957,46 +24013,8 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 42 | class CptTable { - | ^~~~~~~~ -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] - 42 | class CptTable { - | ^~~~~~~~ -In file included from /usr/include/hdf5/serial/H5Cpp.h:42: -/usr/include/hdf5/serial/H5CompType.h:40:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' - 40 | CompType(const CompType &original); - | ^~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] - 42 | class CptTable { - | ^~~~~~~~ -In file included from /usr/include/hdf5/serial/H5Cpp.h:26: -/usr/include/hdf5/serial/H5DcreatProp.h:137:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' - 137 | DSetCreatPropList(const DSetCreatPropList &orig); - | ^~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5DcreatProp.h:29:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] - 29 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { - | ^~~~~~~~~~~~~~~~~ -In file included from /usr/include/hdf5/serial/H5Cpp.h:25: -/usr/include/hdf5/serial/H5OcreatProp.h:53:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' - 53 | ObjCreatPropList(const ObjCreatPropList &original); - | ^~~~~~~~~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here - 42 | class CptTable { - | ^~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here - 132 | table = CptTable(name, sizeof(typename T::data), loc_); - | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -24009,6 +24027,29 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 93%] Built target unit_test_populationanalysis +make -f xtp/src/tests/CMakeFiles/unit_test_incrementalfockbuilder.dir/build.make xtp/src/tests/CMakeFiles/unit_test_incrementalfockbuilder.dir/depend +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_incrementalfockbuilder.dir/DependInfo.cmake --color= +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f xtp/src/tests/CMakeFiles/unit_test_incrementalfockbuilder.dir/build.make xtp/src/tests/CMakeFiles/unit_test_incrementalfockbuilder.dir/build +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 94%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_incrementalfockbuilder.dir/test_incrementalfockbuilder.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_incrementalfockbuilder.dir/test_incrementalfockbuilder.cc.o -MF CMakeFiles/unit_test_incrementalfockbuilder.dir/test_incrementalfockbuilder.cc.o.d -o CMakeFiles/unit_test_incrementalfockbuilder.dir/test_incrementalfockbuilder.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_incrementalfockbuilder.cc +[ 94%] Linking CXX executable unit_test_newton_rapson +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_newton_rapson.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_newton_rapson.dir/test_newton_rapson.cc.o -o unit_test_newton_rapson -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 94%] Built target unit_test_newton_rapson +make -f xtp/src/tests/CMakeFiles/unit_test_parallelism.dir/build.make xtp/src/tests/CMakeFiles/unit_test_parallelism.dir/depend +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_parallelism.dir/DependInfo.cmake --color= +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f xtp/src/tests/CMakeFiles/unit_test_parallelism.dir/build.make xtp/src/tests/CMakeFiles/unit_test_parallelism.dir/build +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 95%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_parallelism.dir/test_parallelism.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_parallelism.dir/test_parallelism.cc.o -MF CMakeFiles/unit_test_parallelism.dir/test_parallelism.cc.o.d -o CMakeFiles/unit_test_parallelism.dir/test_parallelism.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_parallelism.cc /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here @@ -24061,12 +24102,14 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ +[ 95%] Linking CXX executable unit_test_indexparser /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_indexparser.dir/link.txt --verbose=1 /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ @@ -24097,6 +24140,7 @@ /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +[ 95%] Linking CXX executable unit_test_oscillatorstrength_filter /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' @@ -24104,6 +24148,7 @@ /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_oscillatorstrength_filter.dir/link.txt --verbose=1 /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ @@ -24113,32 +24158,8 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ -[ 95%] Linking CXX executable unit_test_eeinteractor -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_eeinteractor.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_eeinteractor.dir/test_eeinteractor.cc.o -o unit_test_eeinteractor -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so -[ 95%] Linking CXX executable unit_test_populationanalysis -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_populationanalysis.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_populationanalysis.dir/test_populationanalysis.cc.o -o unit_test_populationanalysis -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 95%] Built target unit_test_eeinteractor -make -f xtp/src/tests/CMakeFiles/unit_test_anderson.dir/build.make xtp/src/tests/CMakeFiles/unit_test_anderson.dir/depend -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_anderson.dir/DependInfo.cmake --color= -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/src/tests/CMakeFiles/unit_test_anderson.dir/build.make xtp/src/tests/CMakeFiles/unit_test_anderson.dir/build -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 95%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_anderson.dir/test_anderson.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_anderson.dir/test_anderson.cc.o -MF CMakeFiles/unit_test_anderson.dir/test_anderson.cc.o.d -o CMakeFiles/unit_test_anderson.dir/test_anderson.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_anderson.cc -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 95%] Built target unit_test_populationanalysis -make -f xtp/src/tests/CMakeFiles/unit_test_gaussian_quadratures.dir/build.make xtp/src/tests/CMakeFiles/unit_test_gaussian_quadratures.dir/depend -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_gaussian_quadratures.dir/DependInfo.cmake --color= -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/src/tests/CMakeFiles/unit_test_gaussian_quadratures.dir/build.make xtp/src/tests/CMakeFiles/unit_test_gaussian_quadratures.dir/build -make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 95%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_gaussian_quadratures.dir/test_gaussian_quadratures.cc.o -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_gaussian_quadratures.dir/test_gaussian_quadratures.cc.o -MF CMakeFiles/unit_test_gaussian_quadratures.dir/test_gaussian_quadratures.cc.o.d -o CMakeFiles/unit_test_gaussian_quadratures.dir/test_gaussian_quadratures.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_gaussian_quadratures.cc +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_oscillatorstrength_filter.dir/test_oscillatorstrength_filter.cc.o -o unit_test_oscillatorstrength_filter -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_indexparser.dir/test_indexparser.cc.o -o unit_test_indexparser -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/orbitals.h:31, @@ -24167,8 +24188,6 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ -[ 95%] Linking CXX executable unit_test_oscillatorstrength_filter -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_oscillatorstrength_filter.dir/link.txt --verbose=1 /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); @@ -24195,32 +24214,80 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_oscillatorstrength_filter.dir/test_oscillatorstrength_filter.cc.o -o unit_test_oscillatorstrength_filter -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so -[ 95%] Linking CXX executable unit_test_parallelism -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_parallelism.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_parallelism.dir/test_parallelism.cc.o -o unit_test_parallelism -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 95%] Built target unit_test_oscillatorstrength_filter -make -f xtp/src/tools/CMakeFiles/xtp_parallel_manpage.dir/build.make xtp/src/tools/CMakeFiles/xtp_parallel_manpage.dir/depend +[ 95%] Built target unit_test_indexparser +make -f xtp/src/tests/CMakeFiles/unit_test_anderson.dir/build.make xtp/src/tests/CMakeFiles/unit_test_anderson.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tools/CMakeFiles/xtp_parallel_manpage.dir/DependInfo.cmake --color= +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_anderson.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/src/tools/CMakeFiles/xtp_parallel_manpage.dir/build.make xtp/src/tools/CMakeFiles/xtp_parallel_manpage.dir/build +make -f xtp/src/tests/CMakeFiles/unit_test_anderson.dir/build.make xtp/src/tests/CMakeFiles/unit_test_anderson.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 95%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_anderson.dir/test_anderson.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_anderson.dir/test_anderson.cc.o -MF CMakeFiles/unit_test_anderson.dir/test_anderson.cc.o.d -o CMakeFiles/unit_test_anderson.dir/test_anderson.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_anderson.cc +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 162 | attr = loc.createAttribute(name, *dataType, dp); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] + 164 | attr = loc.openAttribute(name); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' + 32 | Attribute(const Attribute &original); + | ^~~~~~~~~ make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 95%] Building xtp_parallel manpage -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tools && ../../../tools/scripts/votca_help2doc --name xtp_parallel --format groff --out xtp_parallel.man -[ 95%] Built target unit_test_parallelism -make -f xtp/src/tools/CMakeFiles/xtp_map_manpage.dir/build.make xtp/src/tools/CMakeFiles/xtp_map_manpage.dir/depend +[ 95%] Built target unit_test_oscillatorstrength_filter +make -f xtp/src/tests/CMakeFiles/unit_test_gaussian_quadratures.dir/build.make xtp/src/tests/CMakeFiles/unit_test_gaussian_quadratures.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tools/CMakeFiles/xtp_map_manpage.dir/DependInfo.cmake --color= +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_gaussian_quadratures.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/src/tools/CMakeFiles/xtp_map_manpage.dir/build.make xtp/src/tools/CMakeFiles/xtp_map_manpage.dir/build +make -f xtp/src/tests/CMakeFiles/unit_test_gaussian_quadratures.dir/build.make xtp/src/tests/CMakeFiles/unit_test_gaussian_quadratures.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 95%] Building xtp_map manpage -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tools && ../../../tools/scripts/votca_help2doc --name xtp_map --format groff --out xtp_map.man -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here +[ 95%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_gaussian_quadratures.dir/test_gaussian_quadratures.cc.o +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2022.1/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2022.1/csg/include -I/build/reproducible-path/votca-2022.1/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include -I/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/include/votca/tools -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -std=c++17 -MD -MT xtp/src/tests/CMakeFiles/unit_test_gaussian_quadratures.dir/test_gaussian_quadratures.cc.o -MF CMakeFiles/unit_test_gaussian_quadratures.dir/test_gaussian_quadratures.cc.o.d -o CMakeFiles/unit_test_gaussian_quadratures.dir/test_gaussian_quadratures.cc.o -c /build/reproducible-path/votca-2022.1/xtp/src/tests/test_gaussian_quadratures.cc +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] + 42 | class CptTable { + | ^~~~~~~~ +/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' + 63 | Group(const Group &original); + | ^~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] + 42 | class CptTable { + | ^~~~~~~~ +In file included from /usr/include/hdf5/serial/H5Cpp.h:42: +/usr/include/hdf5/serial/H5CompType.h:40:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' + 40 | CompType(const CompType &original); + | ^~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] + 42 | class CptTable { + | ^~~~~~~~ +In file included from /usr/include/hdf5/serial/H5Cpp.h:26: +/usr/include/hdf5/serial/H5DcreatProp.h:137:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' + 137 | DSetCreatPropList(const DSetCreatPropList &orig); + | ^~~~~~~~~~~~~~~~~ +/usr/include/hdf5/serial/H5DcreatProp.h:29:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] + 29 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { + | ^~~~~~~~~~~~~~~~~ +In file included from /usr/include/hdf5/serial/H5Cpp.h:25: +/usr/include/hdf5/serial/H5OcreatProp.h:53:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' + 53 | ObjCreatPropList(const ObjCreatPropList &original); + | ^~~~~~~~~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here + 42 | class CptTable { + | ^~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here + 132 | table = CptTable(name, sizeof(typename T::data), loc_); + | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' +/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -24233,30 +24300,59 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ +[ 97%] Linking CXX executable unit_test_localisation_filter +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_localisation_filter.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_localisation_filter.dir/test_localisation_filter.cc.o -o unit_test_localisation_filter -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so +[ 97%] Linking CXX executable unit_test_orca +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_orca.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_orca.dir/test_orca.cc.o -o unit_test_orca -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 97%] Built target unit_test_localisation_filter +make -f xtp/src/tools/CMakeFiles/xtp_parallel_manpage.dir/build.make xtp/src/tools/CMakeFiles/xtp_parallel_manpage.dir/depend +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tools/CMakeFiles/xtp_parallel_manpage.dir/DependInfo.cmake --color= +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f xtp/src/tools/CMakeFiles/xtp_parallel_manpage.dir/build.make xtp/src/tools/CMakeFiles/xtp_parallel_manpage.dir/build +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 97%] Building xtp_parallel manpage +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tools && ../../../tools/scripts/votca_help2doc --name xtp_parallel --format groff --out xtp_parallel.man +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 97%] Built target xtp_parallel_manpage +make -f xtp/src/tools/CMakeFiles/xtp_map_manpage.dir/build.make xtp/src/tools/CMakeFiles/xtp_map_manpage.dir/depend +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tools/CMakeFiles/xtp_map_manpage.dir/DependInfo.cmake --color= +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f xtp/src/tools/CMakeFiles/xtp_map_manpage.dir/build.make xtp/src/tools/CMakeFiles/xtp_map_manpage.dir/build +make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 97%] Building xtp_map manpage +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tools && ../../../tools/scripts/votca_help2doc --name xtp_map --format groff --out xtp_map.man make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 95%] Built target xtp_parallel_manpage +[ 97%] Built target unit_test_orca make -f xtp/src/tools/CMakeFiles/xtp_run_manpage.dir/build.make xtp/src/tools/CMakeFiles/xtp_run_manpage.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tools/CMakeFiles/xtp_run_manpage.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make -f xtp/src/tools/CMakeFiles/xtp_run_manpage.dir/build.make xtp/src/tools/CMakeFiles/xtp_run_manpage.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 95%] Built target xtp_map_manpage +[ 97%] Linking CXX executable unit_test_DeltaQ_filter +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_DeltaQ_filter.dir/link.txt --verbose=1 +[ 97%] Building xtp_run manpage +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tools && ../../../tools/scripts/votca_help2doc --name xtp_run --format groff --out xtp_run.man +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_DeltaQ_filter.dir/test_DeltaQ_filter.cc.o -o unit_test_DeltaQ_filter -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so +[ 97%] Built target xtp_map_manpage make -f xtp/src/tools/CMakeFiles/xtp_tools_manpage.dir/build.make xtp/src/tools/CMakeFiles/xtp_tools_manpage.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tools/CMakeFiles/xtp_tools_manpage.dir/DependInfo.cmake --color= -[ 95%] Building xtp_run manpage make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make -f xtp/src/tools/CMakeFiles/xtp_tools_manpage.dir/build.make xtp/src/tools/CMakeFiles/xtp_tools_manpage.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tools && ../../../tools/scripts/votca_help2doc --name xtp_run --format groff --out xtp_run.man -[ 95%] Building xtp_tools manpage +[ 97%] Building xtp_tools manpage cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tools && ../../../tools/scripts/votca_help2doc --name xtp_tools --format groff --out xtp_tools.man make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 95%] Built target xtp_run_manpage +[ 97%] Built target xtp_run_manpage make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 95%] Built target xtp_tools_manpage +[ 97%] Built target xtp_tools_manpage make -f tools/CMakeFiles/manpages.dir/build.make tools/CMakeFiles/manpages.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/CMakeFiles/manpages.dir/DependInfo.cmake --color= @@ -24265,18 +24361,19 @@ make[4]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'tools/CMakeFiles/manpages.dir/build'. make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 95%] Built target manpages -[ 97%] Linking CXX executable unit_test_localisation_filter -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_localisation_filter.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_localisation_filter.dir/test_localisation_filter.cc.o -o unit_test_localisation_filter -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so -[ 97%] Linking CXX executable unit_test_DeltaQ_filter -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_DeltaQ_filter.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_DeltaQ_filter.dir/test_DeltaQ_filter.cc.o -o unit_test_DeltaQ_filter -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so +[ 97%] Built target manpages +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 97%] Built target unit_test_DeltaQ_filter +[ 97%] Linking CXX executable unit_test_parallelism +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_parallelism.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_parallelism.dir/test_parallelism.cc.o -o unit_test_parallelism -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 97%] Built target unit_test_parallelism In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/orbitals.h:31, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/gaussianwriter.h:26, - from /build/reproducible-path/votca-2022.1/xtp/src/tests/test_gaussianwriter.cc:32: + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/molden.h:26, + from /build/reproducible-path/votca-2022.1/xtp/src/tests/test_molden.cc:30: /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; @@ -24301,6 +24398,8 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ +[ 97%] Linking CXX executable unit_test_incrementalfockbuilder +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_incrementalfockbuilder.dir/link.txt --verbose=1 /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); @@ -24327,19 +24426,13 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ -[ 97%] Linking CXX executable unit_test_overlap_filter -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_overlap_filter.dir/link.txt --verbose=1 -[ 97%] Linking CXX executable unit_test_incrementalfockbuilder -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_incrementalfockbuilder.dir/link.txt --verbose=1 -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_overlap_filter.dir/test_overlap_filter.cc.o -o unit_test_overlap_filter -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so -[ 97%] Built target unit_test_localisation_filter /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_incrementalfockbuilder.dir/test_incrementalfockbuilder.cc.o -o unit_test_incrementalfockbuilder -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/orbitals.h:31, - from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/molden.h:26, - from /build/reproducible-path/votca-2022.1/xtp/src/tests/test_molden.cc:30: + from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/gaussianwriter.h:26, + from /build/reproducible-path/votca-2022.1/xtp/src/tests/test_gaussianwriter.cc:32: /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; @@ -24349,13 +24442,12 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 97%] Built target unit_test_incrementalfockbuilder In file included from /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' In file included from /usr/include/hdf5/serial/H5Cpp.h:34: /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); @@ -24366,7 +24458,6 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ -[ 97%] Built target unit_test_DeltaQ_filter /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); @@ -24393,7 +24484,6 @@ /usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 63 | Group(const Group &original); | ^~~~~ -[ 97%] Built target unit_test_incrementalfockbuilder /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] @@ -24408,60 +24498,6 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 97%] Built target unit_test_overlap_filter -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] - 42 | class CptTable { - | ^~~~~~~~ -/usr/include/hdf5/serial/H5Group.h:63:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' - 63 | Group(const Group &original); - | ^~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] - 42 | class CptTable { - | ^~~~~~~~ -In file included from /usr/include/hdf5/serial/H5Cpp.h:42: -/usr/include/hdf5/serial/H5CompType.h:40:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' - 40 | CompType(const CompType &original); - | ^~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] - 42 | class CptTable { - | ^~~~~~~~ -In file included from /usr/include/hdf5/serial/H5Cpp.h:26: -/usr/include/hdf5/serial/H5DcreatProp.h:137:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' - 137 | DSetCreatPropList(const DSetCreatPropList &orig); - | ^~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5DcreatProp.h:29:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] - 29 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { - | ^~~~~~~~~~~~~~~~~ -In file included from /usr/include/hdf5/serial/H5Cpp.h:25: -/usr/include/hdf5/serial/H5OcreatProp.h:53:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' - 53 | ObjCreatPropList(const ObjCreatPropList &original); - | ^~~~~~~~~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here - 42 | class CptTable { - | ^~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here - 132 | table = CptTable(name, sizeof(typename T::data), loc_); - | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 162 | attr = loc.createAttribute(name, *dataType, dp); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ -/build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] - 164 | attr = loc.openAttribute(name); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' - 32 | Attribute(const Attribute &original); - | ^~~~~~~~~ /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] @@ -24476,9 +24512,19 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ -[ 97%] Linking CXX executable unit_test_density_filter -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_density_filter.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_density_filter.dir/test_density_filter.cc.o -o unit_test_density_filter -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so +[ 97%] Linking CXX executable unit_test_anderson +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_anderson.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_anderson.dir/test_anderson.cc.o -o unit_test_anderson -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so +[ 97%] Linking CXX executable unit_test_overlap_filter +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_overlap_filter.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_overlap_filter.dir/test_overlap_filter.cc.o -o unit_test_overlap_filter -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 97%] Built target unit_test_anderson +[ 98%] Linking CXX executable unit_test_bsecoupling +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_bsecoupling.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_bsecoupling.dir/test_bsecoupling.cc.o -o unit_test_bsecoupling -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 98%] Built target unit_test_overlap_filter /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here @@ -24531,6 +24577,12 @@ /usr/include/hdf5/serial/H5Attribute.h:32:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 32 | Attribute(const Attribute &original); | ^~~~~~~~~ +[ 98%] Linking CXX executable unit_test_density_filter +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_density_filter.dir/link.txt --verbose=1 +[ 98%] Linking CXX executable unit_test_orbreorder +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_density_filter.dir/test_density_filter.cc.o -o unit_test_density_filter -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_orbreorder.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_orbreorder.dir/test_orbreorder.cc.o -o unit_test_orbreorder -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2022.1/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here @@ -24584,27 +24636,16 @@ 32 | Attribute(const Attribute &original); | ^~~~~~~~~ make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 97%] Built target unit_test_density_filter -[ 97%] Linking CXX executable unit_test_orca -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_orca.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_orca.dir/test_orca.cc.o -o unit_test_orca -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 97%] Built target unit_test_orca -[ 97%] Linking CXX executable unit_test_anderson -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_anderson.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_anderson.dir/test_anderson.cc.o -o unit_test_anderson -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so -[ 98%] Linking CXX executable unit_test_bsecoupling -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_bsecoupling.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_bsecoupling.dir/test_bsecoupling.cc.o -o unit_test_bsecoupling -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so -[ 98%] Built target unit_test_anderson -[ 98%] Linking CXX executable unit_test_orbreorder -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_orbreorder.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_orbreorder.dir/test_orbreorder.cc.o -o unit_test_orbreorder -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' [ 98%] Built target unit_test_bsecoupling make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 98%] Built target unit_test_density_filter +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' [ 98%] Built target unit_test_orbreorder +[ 98%] Linking CXX executable unit_test_dftengine +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_dftengine.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_dftengine.dir/test_dftengine.cc.o -o unit_test_dftengine -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so +make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 98%] Built target unit_test_dftengine [100%] Linking CXX executable unit_test_gaussian_quadratures cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_gaussian_quadratures.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_gaussian_quadratures.dir/test_gaussian_quadratures.cc.o -o unit_test_gaussian_quadratures -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so @@ -24615,15 +24656,10 @@ /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_gaussianwriter.dir/test_gaussianwriter.cc.o -o unit_test_gaussianwriter -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' [100%] Built target unit_test_gaussianwriter -[100%] Linking CXX executable unit_test_dftengine -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_dftengine.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_dftengine.dir/test_dftengine.cc.o -o unit_test_dftengine -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so [100%] Linking CXX executable unit_test_molden cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_molden.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2022.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_molden.dir/test_molden.cc.o -o unit_test_molden -Wl,-rpath,/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2022 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.74.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2022 ../../../tools/src/libtools/libvotca_tools.so.2022 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.74.0 /usr/lib/gcc/x86_64-linux-gnu/12/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[100%] Built target unit_test_dftengine -make[4]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' [100%] Built target unit_test_molden [100%] Linking CXX executable unit_test_davidson cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_davidson.dir/link.txt --verbose=1 @@ -25035,225 +25071,225 @@ make -f csg/scripts/CMakeFiles/doc-csg-rst-scripts.dir/build.make csg/scripts/CMakeFiles/doc-csg-rst-scripts.dir/build make[5]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' [ 32%] Building csg_call rst doc -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/csg_call.rst +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/csg_call.rst [ 32%] Building csg_inverse rst doc -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_inverse --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/csg_inverse.rst +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_inverse --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/csg_inverse.rst [ 32%] Building tag_file.sh rst doc (from tag file) -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ tag\ file --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/tag_file.sh.rst +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ tag\ file --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/tag_file.sh.rst [ 32%] Building dummy.sh rst doc (from dummy dummy) -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ dummy\ dummy --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/dummy.sh.rst +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ dummy\ dummy --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/dummy.sh.rst [ 32%] Building functions_common.sh rst doc (from functions common) -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ functions\ common --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/functions_common.sh.rst +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ functions\ common --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/functions_common.sh.rst [ 32%] Building inverse.sh rst doc (from csg master) -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ csg\ master --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/inverse.sh.rst +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ csg\ master --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/inverse.sh.rst [ 32%] Building prepare_generic.sh rst doc (from prepare ibi) -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ prepare\ ibi --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/prepare_generic.sh.rst +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ prepare\ ibi --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/prepare_generic.sh.rst [ 32%] Building prepare_iie.sh rst doc (from prepare iie) -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ prepare\ iie --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/prepare_iie.sh.rst +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ prepare\ iie --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/prepare_iie.sh.rst [ 32%] Building prepare_imc.sh rst doc (from prepare imc) -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ prepare\ imc --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/prepare_imc.sh.rst +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ prepare\ imc --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/prepare_imc.sh.rst [ 32%] Building prepare_optimizer.sh rst doc (from prepare optimizer) -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ prepare\ optimizer --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/prepare_optimizer.sh.rst +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ prepare\ optimizer --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/prepare_optimizer.sh.rst [ 34%] Building prepare_re.sh rst doc (from prepare re) -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ prepare\ re --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/prepare_re.sh.rst +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ prepare\ re --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/prepare_re.sh.rst [ 34%] Building prepare_generic_single.sh rst doc (from prepare_single ibi) -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ prepare_single\ ibi --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/prepare_generic_single.sh.rst +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ prepare_single\ ibi --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/prepare_generic_single.sh.rst [ 34%] Building prepare_optimizer_single.sh rst doc (from prepare_single optimizer) -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ prepare_single\ optimizer --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/prepare_optimizer_single.sh.rst +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ prepare_single\ optimizer --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/prepare_optimizer_single.sh.rst [ 34%] Building initialize_step_generic.sh rst doc (from initstep ibi) -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ initstep\ ibi --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/initialize_step_generic.sh.rst +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ initstep\ ibi --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/initialize_step_generic.sh.rst [ 34%] Building initialize_step_optimizer.sh rst doc (from initstep optimizer) -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ initstep\ optimizer --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/initialize_step_optimizer.sh.rst +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ initstep\ optimizer --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/initialize_step_optimizer.sh.rst [ 34%] Building initialize_step_re.sh rst doc (from initstep re) -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ initstep\ re --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/initialize_step_re.sh.rst +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ initstep\ re --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/initialize_step_re.sh.rst [ 34%] Building add_pot_generic.sh rst doc (from add_pot ibi) -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ add_pot\ ibi --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/add_pot_generic.sh.rst +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ add_pot\ ibi --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/add_pot_generic.sh.rst [ 34%] Building pre_update_re.sh rst doc (from pre_update re) -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ pre_update\ re --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/pre_update_re.sh.rst +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ pre_update\ re --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/pre_update_re.sh.rst [ 34%] Building post_update_generic.sh rst doc (from post_update ibi) -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ post_update\ ibi --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/post_update_generic.sh.rst +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ post_update\ ibi --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/post_update_generic.sh.rst [ 34%] Building post_update_generic_single.sh rst doc (from post_update_single ibi) -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ post_update_single\ ibi --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/post_update_generic_single.sh.rst +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ post_update_single\ ibi --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/post_update_generic_single.sh.rst [ 34%] Building post_update_re_single.sh rst doc (from post_update_single re) -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ post_update_single\ re --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/post_update_re_single.sh.rst +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ post_update_single\ re --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/post_update_re_single.sh.rst [ 34%] Building postupd_scale.sh rst doc (from postupd scale) -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ postupd\ scale --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/postupd_scale.sh.rst +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ postupd\ scale --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/postupd_scale.sh.rst [ 34%] Building postupd_pressure.sh rst doc (from postupd pressure) -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ postupd\ pressure --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/postupd_pressure.sh.rst +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ postupd\ pressure --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/postupd_pressure.sh.rst [ 36%] Building postupd_addlj.sh rst doc (from postupd lj) -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ postupd\ lj --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/postupd_addlj.sh.rst +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ postupd\ lj --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/postupd_addlj.sh.rst [ 37%] Building postupd_splinesmooth.sh rst doc (from postupd splinesmooth) -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ postupd\ splinesmooth --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/postupd_splinesmooth.sh.rst +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ postupd\ splinesmooth --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/postupd_splinesmooth.sh.rst [ 37%] Building postupd_smooth.sh rst doc (from postupd smooth) -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ postupd\ smooth --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/postupd_smooth.sh.rst +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ postupd\ smooth --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/postupd_smooth.sh.rst [ 37%] Building postadd_shift.sh rst doc (from postupd shift) -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ postupd\ shift --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/postadd_shift.sh.rst +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ postupd\ shift --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/postadd_shift.sh.rst [ 37%] Building postadd_dummy.sh rst doc (from postupd dummy) -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ postupd\ dummy --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/postadd_dummy.sh.rst +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ postupd\ dummy --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/postadd_dummy.sh.rst [ 37%] Building postupd_extrapolate.sh rst doc (from postupd extrapolate) -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ postupd\ extrapolate --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/postupd_extrapolate.sh.rst +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ postupd\ extrapolate --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/postupd_extrapolate.sh.rst [ 37%] Building postupd_kbibi_correction.sh rst doc (from postupd kbibi) -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ postupd\ kbibi --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/postupd_kbibi_correction.sh.rst +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ postupd\ kbibi --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/postupd_kbibi_correction.sh.rst [ 37%] Building postupd_cibi_correction.sh rst doc (from postupd cibi) -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ postupd\ cibi --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/postupd_cibi_correction.sh.rst +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ postupd\ cibi --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/postupd_cibi_correction.sh.rst [ 37%] Building postupd_ibi.sh rst doc (from postupd ibi) -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ postupd\ ibi --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/postupd_ibi.sh.rst +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ postupd\ ibi --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/postupd_ibi.sh.rst [ 37%] Building post_add.sh rst doc (from post add) -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ post\ add --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/post_add.sh.rst +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ post\ add --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/post_add.sh.rst [ 37%] Building post_add_single.sh rst doc (from post add_single) -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ post\ add_single --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/post_add_single.sh.rst +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ post\ add_single --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/post_add_single.sh.rst [ 37%] Building postadd_copyback.sh rst doc (from postadd copyback) -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ postadd\ copyback --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/postadd_copyback.sh.rst +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ postadd\ copyback --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/postadd_copyback.sh.rst [ 37%] Building postadd_compress.sh rst doc (from postadd compress) -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ postadd\ compress --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/postadd_compress.sh.rst +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ postadd\ compress --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/postadd_compress.sh.rst [ 37%] Building postadd_convergence.sh rst doc (from postadd convergence) -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ postadd\ convergence --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/postadd_convergence.sh.rst +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ postadd\ convergence --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/postadd_convergence.sh.rst [ 37%] Building postadd_acc_convergence.sh rst doc (from postadd acc_convergence) -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ postadd\ acc_convergence --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/postadd_acc_convergence.sh.rst +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ postadd\ acc_convergence --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/postadd_acc_convergence.sh.rst [ 37%] Building postadd_overwrite.sh rst doc (from postadd overwrite) -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ postadd\ overwrite --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/postadd_overwrite.sh.rst +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ postadd\ overwrite --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/postadd_overwrite.sh.rst [ 37%] Building postadd_plot.sh rst doc (from postadd plot) -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ postadd\ plot --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/postadd_plot.sh.rst +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ postadd\ plot --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/postadd_plot.sh.rst [ 39%] Building postadd_average.sh rst doc (from postadd average) -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ postadd\ average --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/postadd_average.sh.rst +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ postadd\ average --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/postadd_average.sh.rst [ 39%] Building postadd_smooth_at_cut_off.sh rst doc (from postadd smooth_at_cut_off) -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ postadd\ smooth_at_cut_off --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/postadd_smooth_at_cut_off.sh.rst +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ postadd\ smooth_at_cut_off --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/postadd_smooth_at_cut_off.sh.rst [ 39%] Building convergence_check_default.sh rst doc (from convergence_check default) -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ convergence_check\ default --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/convergence_check_default.sh.rst +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ convergence_check\ default --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/convergence_check_default.sh.rst [ 39%] Building resample_target.sh rst doc (from resample target) -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ resample\ target --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/resample_target.sh.rst +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ resample\ target --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/resample_target.sh.rst [ 39%] Building update_ibi.sh rst doc (from update ibi) -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ update\ ibi --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/update_ibi.sh.rst +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ update\ ibi --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/update_ibi.sh.rst [ 39%] Building update_ibi_single.sh rst doc (from update ibi_single) -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ update\ ibi_single --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/update_ibi_single.sh.rst +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ update\ ibi_single --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/update_ibi_single.sh.rst [ 40%] Building update_ibi_pot.pl rst doc (from update ibi_pot) -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ update\ ibi_pot --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/update_ibi_pot.pl.rst +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ update\ ibi_pot --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/update_ibi_pot.pl.rst [ 40%] Building update_iie.sh rst doc (from update iie) -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ update\ iie --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/update_iie.sh.rst +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ update\ iie --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/update_iie.sh.rst [ 40%] Building iie.py rst doc (from update iie_pot) -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ update\ iie_pot --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/iie.py.rst +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ update\ iie_pot --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/iie.py.rst [ 40%] Building calc_rdf_generic.sh rst doc (from rdf_incl_intra generic) -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ rdf_incl_intra\ generic --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/calc_rdf_generic.sh.rst +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ rdf_incl_intra\ generic --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/calc_rdf_generic.sh.rst [ 40%] Building update_imc.sh rst doc (from update imc) -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ update\ imc --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/update_imc.sh.rst +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ update\ imc --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/update_imc.sh.rst [ 40%] Building update_imc_single.sh rst doc (from update imc_single) -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ update\ imc_single --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/update_imc_single.sh.rst +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ update\ imc_single --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/update_imc_single.sh.rst [ 40%] Building optimizer_prepare_state.sh rst doc (from optimizer prepare_state) -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ optimizer\ prepare_state --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/optimizer_prepare_state.sh.rst +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ optimizer\ prepare_state --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/optimizer_prepare_state.sh.rst [ 40%] Building optimizer_parameters_to_potential.sh rst doc (from optimizer parameters_to_potential) -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ optimizer\ parameters_to_potential --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/optimizer_parameters_to_potential.sh.rst +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ optimizer\ parameters_to_potential --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/optimizer_parameters_to_potential.sh.rst [ 40%] Building optimizer_state_to_potentials.sh rst doc (from optimizer state_to_potentials) -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ optimizer\ state_to_potentials --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/optimizer_state_to_potentials.sh.rst +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ optimizer\ state_to_potentials --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/optimizer_state_to_potentials.sh.rst [ 40%] Building optimizer_state_to_mapping.sh rst doc (from optimizer state_to_mapping) -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ optimizer\ state_to_mapping --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/optimizer_state_to_mapping.sh.rst +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ optimizer\ state_to_mapping --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/optimizer_state_to_mapping.sh.rst [ 40%] Building update_optimizer.sh rst doc (from update optimizer) -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ update\ optimizer --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/update_optimizer.sh.rst +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ update\ optimizer --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/update_optimizer.sh.rst [ 40%] Building update_optimizer_single.sh rst doc (from update optimizer_single) -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ update\ optimizer_single --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/update_optimizer_single.sh.rst +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ update\ optimizer_single --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/update_optimizer_single.sh.rst [ 40%] Building optimizer_target_rdf.sh rst doc (from optimizer_target rdf) -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ optimizer_target\ rdf --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/optimizer_target_rdf.sh.rst +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ optimizer_target\ rdf --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/optimizer_target_rdf.sh.rst [ 40%] Building optimizer_target_density.sh rst doc (from optimizer_target density) -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ optimizer_target\ density --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/optimizer_target_density.sh.rst +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ optimizer_target\ density --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/optimizer_target_density.sh.rst [ 42%] Building optimizer_target_pressure.sh rst doc (from optimizer_target pressure) -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ optimizer_target\ pressure --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/optimizer_target_pressure.sh.rst +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ optimizer_target\ pressure --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/optimizer_target_pressure.sh.rst [ 42%] Building simplex_downhill_processor.pl rst doc (from simplex precede_state) -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ simplex\ precede_state --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/simplex_downhill_processor.pl.rst +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ simplex\ precede_state --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/simplex_downhill_processor.pl.rst [ 42%] Building cma_processor.py rst doc (from cma precede_state) -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ cma\ precede_state --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/cma_processor.py.rst +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ cma\ precede_state --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/cma_processor.py.rst /build/reproducible-path/votca-2022.1/debian/cma-3.2.0/cma/s.py:13: UserWarning: Could not import matplotlib.pyplot, therefore ``cma.plot()`` etc. is not available _warnings.warn('Could not import matplotlib.pyplot, therefore' [ 42%] Building update_re.sh rst doc (from update re) -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ update\ re --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/update_re.sh.rst +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ update\ re --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/update_re.sh.rst [ 42%] Building calc_target_rdf_generic.sh rst doc (from calc target_rdf) -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ calc\ target_rdf --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/calc_target_rdf_generic.sh.rst +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ calc\ target_rdf --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/calc_target_rdf_generic.sh.rst [ 42%] Building pressure_cor_simple.pl rst doc (from pressure_cor simple) -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ pressure_cor\ simple --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/pressure_cor_simple.pl.rst +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ pressure_cor\ simple --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/pressure_cor_simple.pl.rst [ 42%] Building pressure_cor_wjk.pl rst doc (from pressure_cor wjk) -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ pressure_cor\ wjk --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/pressure_cor_wjk.pl.rst +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ pressure_cor\ wjk --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/pressure_cor_wjk.pl.rst [ 42%] Building lj_126.pl rst doc (from compute_lj 12_6) -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ compute_lj\ 12_6 --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/lj_126.pl.rst +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ compute_lj\ 12_6 --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/lj_126.pl.rst [ 44%] Building kbibi_ramp_correction.pl rst doc (from kbibi ramp_correction) -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ kbibi\ ramp_correction --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/kbibi_ramp_correction.pl.rst +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ kbibi\ ramp_correction --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/kbibi_ramp_correction.pl.rst [ 44%] Building calc_kbint.sh rst doc (from calc kbint) -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ calc\ kbint --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/calc_kbint.sh.rst +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ calc\ kbint --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/calc_kbint.sh.rst [ 45%] Building add_POT.pl rst doc (from table add) -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ table\ add --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/add_POT.pl.rst +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ table\ add --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/add_POT.pl.rst [ 45%] Building table_integrate.pl rst doc (from table integrate) -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ table\ integrate --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/table_integrate.pl.rst +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ table\ integrate --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/table_integrate.pl.rst [ 45%] Building table_extrapolate.pl rst doc (from table extrapolate) -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ table\ extrapolate --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/table_extrapolate.pl.rst +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ table\ extrapolate --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/table_extrapolate.pl.rst [ 45%] Building merge_tables.pl rst doc (from table merge) -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ table\ merge --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/merge_tables.pl.rst +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ table\ merge --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/merge_tables.pl.rst [ 47%] Building table_smooth.pl rst doc (from table smooth) -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ table\ smooth --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/table_smooth.pl.rst +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ table\ smooth --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/table_smooth.pl.rst [ 47%] Building table_smooth_at_cut_off.py rst doc (from table smooth_at_cut_off) -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ table\ smooth_at_cut_off --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/table_smooth_at_cut_off.py.rst +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ table\ smooth_at_cut_off --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/table_smooth_at_cut_off.py.rst [ 47%] Building table_linearop.pl rst doc (from table linearop) -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ table\ linearop --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/table_linearop.pl.rst +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ table\ linearop --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/table_linearop.pl.rst [ 47%] Building table_dummy.sh rst doc (from table dummy) -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ table\ dummy --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/table_dummy.sh.rst +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ table\ dummy --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/table_dummy.sh.rst [ 47%] Building table_get_value.pl rst doc (from table get_value) -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ table\ get_value --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/table_get_value.pl.rst +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ table\ get_value --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/table_get_value.pl.rst [ 47%] Building table_switch_border.pl rst doc (from table switch_border) -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ table\ switch_border --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/table_switch_border.pl.rst +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ table\ switch_border --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/table_switch_border.pl.rst [ 49%] Building table_combine.pl rst doc (from table compare) -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ table\ compare --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/table_combine.pl.rst +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ table\ compare --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/table_combine.pl.rst [ 49%] Building table_average.sh rst doc (from table average) -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ table\ average --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/table_average.sh.rst +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ table\ average --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/table_average.sh.rst [ 49%] Building table_scale.pl rst doc (from table scale) -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ table\ scale --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/table_scale.pl.rst +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ table\ scale --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/table_scale.pl.rst [ 49%] Building table_change_flag.sh rst doc (from table change_flag) -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ table\ change_flag --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/table_change_flag.sh.rst +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ table\ change_flag --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/table_change_flag.sh.rst [ 49%] Building table_functional.sh rst doc (from table functional) -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ table\ functional --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/table_functional.sh.rst +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ table\ functional --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/table_functional.sh.rst [ 49%] Building potential_extrapolate.sh rst doc (from potential extrapolate) -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ potential\ extrapolate --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/potential_extrapolate.sh.rst +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ potential\ extrapolate --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/potential_extrapolate.sh.rst [ 49%] Building potential_shift.pl rst doc (from potential shift) -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ potential\ shift --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/potential_shift.pl.rst +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ potential\ shift --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/potential_shift.pl.rst [ 49%] Building table_to_tab.pl rst doc (from convert_potential tab) -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ convert_potential\ tab --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/table_to_tab.pl.rst +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ convert_potential\ tab --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/table_to_tab.pl.rst [ 49%] Building dist_adjust.pl rst doc (from dist adjust) -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ dist\ adjust --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/dist_adjust.pl.rst +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ dist\ adjust --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/dist_adjust.pl.rst [ 49%] Building dist_boltzmann_invert.pl rst doc (from dist invert) -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ dist\ invert --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/dist_boltzmann_invert.pl.rst +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ dist\ invert --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/dist_boltzmann_invert.pl.rst [ 49%] Building tables_jackknife.pl rst doc (from tables jackknife) -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ tables\ jackknife --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/tables_jackknife.pl.rst +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ tables\ jackknife --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/tables_jackknife.pl.rst [ 49%] Building initialize_step_genericsim.sh rst doc (from initstep gromacs) -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ initstep\ gromacs --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/initialize_step_genericsim.sh.rst +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ initstep\ gromacs --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/initialize_step_genericsim.sh.rst [ 49%] Building run_gromacs.sh rst doc (from run gromacs) -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ run\ gromacs --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/run_gromacs.sh.rst +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ run\ gromacs --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/run_gromacs.sh.rst [ 50%] Building clean_generic.sh rst doc (from clean gromacs) -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ clean\ gromacs --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/clean_generic.sh.rst +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ clean\ gromacs --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/clean_generic.sh.rst [ 50%] Building calc_pressure_gromacs.sh rst doc (from pressure gromacs) -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ pressure\ gromacs --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/calc_pressure_gromacs.sh.rst +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ pressure\ gromacs --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/calc_pressure_gromacs.sh.rst [ 50%] Building calc_pressure_lammps.sh rst doc (from pressure lammps) -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ pressure\ lammps --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/calc_pressure_lammps.sh.rst +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ pressure\ lammps --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/calc_pressure_lammps.sh.rst [ 50%] Building imc_stat_generic.sh rst doc (from imc_stat gromacs) -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ imc_stat\ gromacs --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/imc_stat_generic.sh.rst +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ imc_stat\ gromacs --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/imc_stat_generic.sh.rst [ 50%] Building calc_density_generic.sh rst doc (from density gromacs) -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ density\ gromacs --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/calc_density_generic.sh.rst +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ density\ gromacs --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/calc_density_generic.sh.rst [ 50%] Building potential_to_gromacs.sh rst doc (from convert_potential gromacs) -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ convert_potential\ gromacs --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/potential_to_gromacs.sh.rst +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ convert_potential\ gromacs --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/potential_to_gromacs.sh.rst [ 52%] Building potentials_to_generic.sh rst doc (from convert_potentials gromacs) -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ convert_potentials\ gromacs --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/potentials_to_generic.sh.rst +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ convert_potentials\ gromacs --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/potentials_to_generic.sh.rst [ 52%] Building table_to_xvg.pl rst doc (from convert_potential xvg) -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ convert_potential\ xvg --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/table_to_xvg.pl.rst +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ convert_potential\ xvg --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/table_to_xvg.pl.rst [ 52%] Building functions_gromacs.sh rst doc (from functions gromacs) -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ functions\ gromacs --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/functions_gromacs.sh.rst +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ functions\ gromacs --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/functions_gromacs.sh.rst [ 52%] Building run_genericsim.sh rst doc (from run espresso) -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ run\ espresso --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/run_genericsim.sh.rst +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ run\ espresso --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/run_genericsim.sh.rst [ 52%] Building potential_to_generic.sh rst doc (from convert_potential espresso) -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ convert_potential\ espresso --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/potential_to_generic.sh.rst +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ convert_potential\ espresso --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/potential_to_generic.sh.rst [ 54%] Building functions_genericsim.sh rst doc (from functions espresso) -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ functions\ espresso --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/functions_genericsim.sh.rst +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ functions\ espresso --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/functions_genericsim.sh.rst [ 54%] Building potential_to_lammps.sh rst doc (from convert_potential lammps) -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ convert_potential\ lammps --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/potential_to_lammps.sh.rst +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ convert_potential\ lammps --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/potential_to_lammps.sh.rst [ 54%] Building functions_dlpoly.sh rst doc (from functions dlpoly) -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ functions\ dlpoly --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/functions_dlpoly.sh.rst +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ functions\ dlpoly --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/functions_dlpoly.sh.rst [ 54%] Building potential_to_dlpoly.sh rst doc (from convert_potential dlpoly) -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ convert_potential\ dlpoly --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/potential_to_dlpoly.sh.rst +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ convert_potential\ dlpoly --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/potential_to_dlpoly.sh.rst [ 54%] Building potentials_to_dlpoly.sh rst doc (from convert_potentials dlpoly) -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ convert_potentials\ dlpoly --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/potentials_to_dlpoly.sh.rst +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2022.1/csg/share" PATH="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts:/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/csg_call\ convert_potentials\ dlpoly --format rst --out /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/sphinx/csg/scripts/potentials_to_dlpoly.sh.rst make[5]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' [ 55%] Built target doc-csg-rst-scripts make -f csg/share/doc/CMakeFiles/doc-csg-manual.dir/build.make csg/share/doc/CMakeFiles/doc-csg-manual.dir/depend @@ -25682,7 +25718,7 @@ reading sources... [ 74%] tools/votca_property reading sources... [ 74%] websiteAndDocumentation reading sources... [ 75%] xtp-tutorials/DFTGWBSE_ENERGY -/usr/lib/python3/dist-packages/IPython/paths.py:70: UserWarning: IPython parent '/nonexistent/first-build' is not a writable location, using a temp directory. +/usr/lib/python3/dist-packages/IPython/paths.py:70: UserWarning: IPython parent '/nonexistent/second-build' is not a writable location, using a temp directory. warn("IPython parent '{0}' is not a writable location," 0.00s - Debugger warning: It seems that frozen modules are being used, which may 0.00s - make the debugger miss breakpoints. Please pass -Xfrozen_modules=off @@ -25692,43 +25728,43 @@ 0.00s - make the debugger miss breakpoints. Please pass -Xfrozen_modules=off 0.00s - to python to disable frozen modules. 0.00s - Note: Debugging will proceed. Set PYDEVD_DISABLE_FILE_VALIDATION=1 to disable this validation. -/usr/lib/python3/dist-packages/IPython/paths.py:70: UserWarning: IPython parent '/nonexistent/first-build' is not a writable location, using a temp directory. +/usr/lib/python3/dist-packages/IPython/paths.py:70: UserWarning: IPython parent '/nonexistent/second-build' is not a writable location, using a temp directory. warn("IPython parent '{0}' is not a writable location," reading sources... [ 75%] xtp-tutorials/DFTGWBSE_OPTIMIZATION -/usr/lib/python3/dist-packages/IPython/paths.py:70: UserWarning: IPython parent '/nonexistent/first-build' is not a writable location, using a temp directory. +/usr/lib/python3/dist-packages/IPython/paths.py:70: UserWarning: IPython parent '/nonexistent/second-build' is not a writable location, using a temp directory. warn("IPython parent '{0}' is not a writable location," 0.00s - Debugger warning: It seems that frozen modules are being used, which may 0.00s - make the debugger miss breakpoints. Please pass -Xfrozen_modules=off 0.00s - to python to disable frozen modules. 0.00s - Note: Debugging will proceed. Set PYDEVD_DISABLE_FILE_VALIDATION=1 to disable this validation. -/usr/lib/python3/dist-packages/IPython/paths.py:70: UserWarning: IPython parent '/nonexistent/first-build' is not a writable location, using a temp directory. +/usr/lib/python3/dist-packages/IPython/paths.py:70: UserWarning: IPython parent '/nonexistent/second-build' is not a writable location, using a temp directory. warn("IPython parent '{0}' is not a writable location," reading sources... [ 76%] xtp-tutorials/LAMMPS_KMC -/usr/lib/python3/dist-packages/IPython/paths.py:70: UserWarning: IPython parent '/nonexistent/first-build' is not a writable location, using a temp directory. +/usr/lib/python3/dist-packages/IPython/paths.py:70: UserWarning: IPython parent '/nonexistent/second-build' is not a writable location, using a temp directory. warn("IPython parent '{0}' is not a writable location," 0.00s - Debugger warning: It seems that frozen modules are being used, which may 0.00s - make the debugger miss breakpoints. Please pass -Xfrozen_modules=off 0.00s - to python to disable frozen modules. 0.00s - Note: Debugging will proceed. Set PYDEVD_DISABLE_FILE_VALIDATION=1 to disable this validation. -/usr/lib/python3/dist-packages/IPython/paths.py:70: UserWarning: IPython parent '/nonexistent/first-build' is not a writable location, using a temp directory. +/usr/lib/python3/dist-packages/IPython/paths.py:70: UserWarning: IPython parent '/nonexistent/second-build' is not a writable location, using a temp directory. warn("IPython parent '{0}' is not a writable location," reading sources... [ 76%] xtp-tutorials/QMMM_GROMACS -/usr/lib/python3/dist-packages/IPython/paths.py:70: UserWarning: IPython parent '/nonexistent/first-build' is not a writable location, using a temp directory. +/usr/lib/python3/dist-packages/IPython/paths.py:70: UserWarning: IPython parent '/nonexistent/second-build' is not a writable location, using a temp directory. warn("IPython parent '{0}' is not a writable location," -0.00s - Debugger warning: It seems that frozen modules are being used, which may +0.01s - Debugger warning: It seems that frozen modules are being used, which may 0.00s - make the debugger miss breakpoints. Please pass -Xfrozen_modules=off 0.00s - to python to disable frozen modules. 0.00s - Note: Debugging will proceed. Set PYDEVD_DISABLE_FILE_VALIDATION=1 to disable this validation. -/usr/lib/python3/dist-packages/IPython/paths.py:70: UserWarning: IPython parent '/nonexistent/first-build' is not a writable location, using a temp directory. +/usr/lib/python3/dist-packages/IPython/paths.py:70: UserWarning: IPython parent '/nonexistent/second-build' is not a writable location, using a temp directory. warn("IPython parent '{0}' is not a writable location," reading sources... [ 77%] xtp-tutorials/QMMM_LAMMPS -/usr/lib/python3/dist-packages/IPython/paths.py:70: UserWarning: IPython parent '/nonexistent/first-build' is not a writable location, using a temp directory. +/usr/lib/python3/dist-packages/IPython/paths.py:70: UserWarning: IPython parent '/nonexistent/second-build' is not a writable location, using a temp directory. warn("IPython parent '{0}' is not a writable location," 0.00s - Debugger warning: It seems that frozen modules are being used, which may -0.00s - make the debugger miss breakpoints. Please pass -Xfrozen_modules=off +0.01s - make the debugger miss breakpoints. Please pass -Xfrozen_modules=off 0.00s - to python to disable frozen modules. 0.00s - Note: Debugging will proceed. Set PYDEVD_DISABLE_FILE_VALIDATION=1 to disable this validation. -/usr/lib/python3/dist-packages/IPython/paths.py:70: UserWarning: IPython parent '/nonexistent/first-build' is not a writable location, using a temp directory. +/usr/lib/python3/dist-packages/IPython/paths.py:70: UserWarning: IPython parent '/nonexistent/second-build' is not a writable location, using a temp directory. warn("IPython parent '{0}' is not a writable location," reading sources... [ 77%] xtp-tutorials/XTP-TUTORIAL reading sources... [ 78%] xtp-tutorials/help @@ -26033,7 +26069,7 @@ make[2]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[1]: Leaving directory '/build/reproducible-path/votca-2022.1' dh_auto_build -Nvotca-data -Nvotca-tutorials - cd obj-x86_64-linux-gnu && make -j16 "INSTALL=install --strip-program=true" VERBOSE=1 + cd obj-x86_64-linux-gnu && make -j15 "INSTALL=install --strip-program=true" VERBOSE=1 make[1]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' /usr/bin/cmake -S/build/reproducible-path/votca-2022.1 -B/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/CMakeFiles /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu//CMakeFiles/progress.marks @@ -26041,658 +26077,658 @@ make[2]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make -f xtp/src/libxtp/CMakeFiles/gitversion-xtp.dir/build.make xtp/src/libxtp/CMakeFiles/gitversion-xtp.dir/depend make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/libxtp /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp/CMakeFiles/gitversion-xtp.dir/DependInfo.cmake --color= make -f tools/src/libtools/CMakeFiles/gitversion.dir/build.make tools/src/libtools/CMakeFiles/gitversion.dir/depend +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/libxtp /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp/CMakeFiles/gitversion-xtp.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f csg/src/libcsg/CMakeFiles/gitversion-csg.dir/build.make csg/src/libcsg/CMakeFiles/gitversion-csg.dir/depend cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/tools/src/libtools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools/CMakeFiles/gitversion.dir/DependInfo.cmake --color= +make -f csg/src/libcsg/CMakeFiles/gitversion-csg.dir/build.make csg/src/libcsg/CMakeFiles/gitversion-csg.dir/depend make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/libcsg /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg/CMakeFiles/gitversion-csg.dir/DependInfo.cmake --color= make -f tools/scripts/CMakeFiles/votca_help2doc_build.dir/build.make tools/scripts/CMakeFiles/votca_help2doc_build.dir/depend -make -f tools/scripts/CMakeFiles/votca_compare_build.dir/build.make tools/scripts/CMakeFiles/votca_compare_build.dir/depend -make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/tools/scripts /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/CMakeFiles/votca_help2doc_build.dir/DependInfo.cmake --color= -make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/tools/scripts /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/CMakeFiles/votca_compare_build.dir/DependInfo.cmake --color= -make -f tools/share/man/CMakeFiles/votca_tools_manpages.dir/build.make tools/share/man/CMakeFiles/votca_tools_manpages.dir/depend make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f tools/src/libtools/CMakeFiles/gitversion.dir/build.make tools/src/libtools/CMakeFiles/gitversion.dir/build -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/tools/share/man /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/share/man /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/share/man/CMakeFiles/votca_tools_manpages.dir/DependInfo.cmake --color= +make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/tools/scripts /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/CMakeFiles/votca_help2doc_build.dir/DependInfo.cmake --color= make -f xtp/src/libxtp/CMakeFiles/gitversion-xtp.dir/build.make xtp/src/libxtp/CMakeFiles/gitversion-xtp.dir/build -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools && /usr/bin/cmake -DTOP_SOURCE_DIR="/build/reproducible-path/votca-2022.1" -DGIT_EXECUTABLE="" -P /build/reproducible-path/votca-2022.1/tools/CMakeModules/gitversion.cmake -make -f csg/share/man/CMakeFiles/votca_csg_manpages.dir/build.make csg/share/man/CMakeFiles/votca_csg_manpages.dir/depend make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/cmake -DTOP_SOURCE_DIR="/build/reproducible-path/votca-2022.1" -DGIT_EXECUTABLE="" -P /build/reproducible-path/votca-2022.1/xtp/CMakeModules/gitversion.cmake -make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f tools/src/libtools/CMakeFiles/gitversion.dir/build.make tools/src/libtools/CMakeFiles/gitversion.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/share/man /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/man /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/man/CMakeFiles/votca_csg_manpages.dir/DependInfo.cmake --color= +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools && /usr/bin/cmake -DTOP_SOURCE_DIR="/build/reproducible-path/votca-2022.1" -DGIT_EXECUTABLE="" -P /build/reproducible-path/votca-2022.1/tools/CMakeModules/gitversion.cmake make -f csg/src/libcsg/CMakeFiles/gitversion-csg.dir/build.make csg/src/libcsg/CMakeFiles/gitversion-csg.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg && /usr/bin/cmake -DTOP_SOURCE_DIR="/build/reproducible-path/votca-2022.1" -DGIT_EXECUTABLE="" -P /build/reproducible-path/votca-2022.1/csg/CMakeModules/gitversion.cmake -make -f tools/scripts/CMakeFiles/votca_help2doc_build.dir/build.make tools/scripts/CMakeFiles/votca_help2doc_build.dir/build +make -f tools/scripts/CMakeFiles/votca_compare_build.dir/build.make tools/scripts/CMakeFiles/votca_compare_build.dir/depend +make -f tools/share/man/CMakeFiles/votca_tools_manpages.dir/build.make tools/share/man/CMakeFiles/votca_tools_manpages.dir/depend +make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/tools/scripts /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/CMakeFiles/votca_compare_build.dir/DependInfo.cmake --color= +make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/tools/share/man /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/share/man /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/share/man/CMakeFiles/votca_tools_manpages.dir/DependInfo.cmake --color= +make -f csg/share/man/CMakeFiles/votca_csg_manpages.dir/build.make csg/share/man/CMakeFiles/votca_csg_manpages.dir/depend +make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/share/man /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/man /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/man/CMakeFiles/votca_csg_manpages.dir/DependInfo.cmake --color= +make -f xtp/scripts/CMakeFiles/xtp_basisset_build.dir/build.make xtp/scripts/CMakeFiles/xtp_basisset_build.dir/depend make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f tools/scripts/CMakeFiles/votca_help2doc_build.dir/build.make tools/scripts/CMakeFiles/votca_help2doc_build.dir/build +make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/scripts /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/scripts /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/scripts/CMakeFiles/xtp_basisset_build.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'tools/scripts/CMakeFiles/votca_help2doc_build.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make -f tools/scripts/CMakeFiles/votca_compare_build.dir/build.make tools/scripts/CMakeFiles/votca_compare_build.dir/build -make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f tools/share/man/CMakeFiles/votca_tools_manpages.dir/build.make tools/share/man/CMakeFiles/votca_tools_manpages.dir/build +[ 0%] Built target votca_help2doc_build +make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'tools/scripts/CMakeFiles/votca_compare_build.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f tools/share/man/CMakeFiles/votca_tools_manpages.dir/build.make tools/share/man/CMakeFiles/votca_tools_manpages.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f csg/share/man/CMakeFiles/votca_csg_manpages.dir/build.make csg/share/man/CMakeFiles/votca_csg_manpages.dir/build make[3]: Nothing to be done for 'tools/share/man/CMakeFiles/votca_tools_manpages.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f csg/share/man/CMakeFiles/votca_csg_manpages.dir/build.make csg/share/man/CMakeFiles/votca_csg_manpages.dir/build +make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'csg/share/man/CMakeFiles/votca_csg_manpages.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 0%] Built target votca_help2doc_build +make -f xtp/scripts/CMakeFiles/xtp_basisset_build.dir/build.make xtp/scripts/CMakeFiles/xtp_basisset_build.dir/build make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/scripts/CMakeFiles/xtp_basisset_build.dir/build.make xtp/scripts/CMakeFiles/xtp_basisset_build.dir/depend +make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make[3]: Nothing to be done for 'xtp/scripts/CMakeFiles/xtp_basisset_build.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 0%] Built target gitversion-xtp [ 0%] Built target votca_compare_build -make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/scripts /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/scripts /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/scripts/CMakeFiles/xtp_basisset_build.dir/DependInfo.cmake --color= +[ 0%] Built target gitversion-csg [ 0%] Built target votca_tools_manpages -[ 0%] Built target votca_csg_manpages +[ 0%] Built target gitversion make -f xtp/scripts/CMakeFiles/xtp_update_mapfile_build.dir/build.make xtp/scripts/CMakeFiles/xtp_update_mapfile_build.dir/depend -make -f xtp/scripts/CMakeFiles/xtp_modify_jobfile_build.dir/build.make xtp/scripts/CMakeFiles/xtp_modify_jobfile_build.dir/depend make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/scripts /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/scripts /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/scripts/CMakeFiles/xtp_update_mapfile_build.dir/DependInfo.cmake --color= -make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 0%] Built target gitversion +make -f xtp/scripts/CMakeFiles/xtp_modify_jobfile_build.dir/build.make xtp/scripts/CMakeFiles/xtp_modify_jobfile_build.dir/depend +[ 0%] Built target xtp_basisset_build +[ 0%] Built target votca_csg_manpages make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/scripts /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/scripts /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/scripts/CMakeFiles/xtp_modify_jobfile_build.dir/DependInfo.cmake --color= make -f xtp/scripts/CMakeFiles/xtp_autogen_mapping_build.dir/build.make xtp/scripts/CMakeFiles/xtp_autogen_mapping_build.dir/depend -make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/scripts /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/scripts /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/scripts/CMakeFiles/xtp_autogen_mapping_build.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/scripts/CMakeFiles/xtp_qmmm2qm_build.dir/build.make xtp/scripts/CMakeFiles/xtp_qmmm2qm_build.dir/depend -[ 0%] Built target gitversion-xtp make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/scripts /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/scripts /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/scripts/CMakeFiles/xtp_qmmm2qm_build.dir/DependInfo.cmake --color= -make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/scripts /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/scripts /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/scripts/CMakeFiles/xtp_autogen_mapping_build.dir/DependInfo.cmake --color= make -f xtp/scripts/CMakeFiles/xtp_update_mapfile_build.dir/build.make xtp/scripts/CMakeFiles/xtp_update_mapfile_build.dir/build -make -f xtp/scripts/CMakeFiles/xtp_basisset_build.dir/build.make xtp/scripts/CMakeFiles/xtp_basisset_build.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'xtp/scripts/CMakeFiles/xtp_update_mapfile_build.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 0%] Built target gitversion-csg +make -f xtp/scripts/CMakeFiles/xtp_qmmm2qm_build.dir/build.make xtp/scripts/CMakeFiles/xtp_qmmm2qm_build.dir/depend make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/scripts/CMakeFiles/xtp_modify_jobfile_build.dir/build.make xtp/scripts/CMakeFiles/xtp_modify_jobfile_build.dir/build -make[3]: Nothing to be done for 'xtp/scripts/CMakeFiles/xtp_basisset_build.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'xtp/scripts/CMakeFiles/xtp_modify_jobfile_build.dir/build'. -make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/scripts /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/scripts /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/scripts/CMakeFiles/xtp_qmmm2qm_build.dir/DependInfo.cmake --color= [ 0%] Built target xtp_update_mapfile_build -[ 0%] Built target xtp_basisset_build +make -f xtp/scripts/CMakeFiles/xtp_modify_jobfile_build.dir/build.make xtp/scripts/CMakeFiles/xtp_modify_jobfile_build.dir/build make -f xtp/scripts/CMakeFiles/xtp_autogen_mapping_build.dir/build.make xtp/scripts/CMakeFiles/xtp_autogen_mapping_build.dir/build +make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make[3]: Nothing to be done for 'xtp/scripts/CMakeFiles/xtp_modify_jobfile_build.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'xtp/scripts/CMakeFiles/xtp_autogen_mapping_build.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make -f xtp/scripts/CMakeFiles/xtp_qmmm2qm_build.dir/build.make xtp/scripts/CMakeFiles/xtp_qmmm2qm_build.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'xtp/scripts/CMakeFiles/xtp_qmmm2qm_build.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' [ 0%] Built target xtp_modify_jobfile_build make -f csg/scripts/CMakeFiles/csg_call_build.dir/build.make csg/scripts/CMakeFiles/csg_call_build.dir/depend +[ 0%] Built target xtp_autogen_mapping_build make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/scripts /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/CMakeFiles/csg_call_build.dir/DependInfo.cmake --color= make -f csg/scripts/CMakeFiles/csg_inverse_build.dir/build.make csg/scripts/CMakeFiles/csg_inverse_build.dir/depend -make -f xtp/share/benchmark/CMakeFiles/xtp_benchmark_build.dir/build.make xtp/share/benchmark/CMakeFiles/xtp_benchmark_build.dir/depend make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f xtp/share/benchmark/CMakeFiles/xtp_benchmark_build.dir/build.make xtp/share/benchmark/CMakeFiles/xtp_benchmark_build.dir/depend cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/scripts /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/CMakeFiles/csg_inverse_build.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/share/benchmark /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/share/benchmark /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/share/benchmark/CMakeFiles/xtp_benchmark_build.dir/DependInfo.cmake --color= [ 0%] Built target xtp_qmmm2qm_build +make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make -f tools/src/libtools/CMakeFiles/votca_tools.dir/build.make tools/src/libtools/CMakeFiles/votca_tools.dir/depend -[ 0%] Built target xtp_autogen_mapping_build +make -f csg/scripts/CMakeFiles/csg_call_build.dir/build.make csg/scripts/CMakeFiles/csg_call_build.dir/build make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make -f csg/scripts/CMakeFiles/csg_inverse_build.dir/build.make csg/scripts/CMakeFiles/csg_inverse_build.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f tools/scripts/CMakeFiles/votca_compare_manpage.dir/build.make tools/scripts/CMakeFiles/votca_compare_manpage.dir/depend -make[3]: Nothing to be done for 'csg/scripts/CMakeFiles/csg_inverse_build.dir/build'. -make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/tools/scripts /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/CMakeFiles/votca_compare_manpage.dir/DependInfo.cmake --color= -make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make[3]: Nothing to be done for 'csg/scripts/CMakeFiles/csg_call_build.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f csg/scripts/CMakeFiles/csg_call_build.dir/build.make csg/scripts/CMakeFiles/csg_call_build.dir/build make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'csg/scripts/CMakeFiles/csg_call_build.dir/build'. +make[3]: Nothing to be done for 'csg/scripts/CMakeFiles/csg_inverse_build.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make -f xtp/share/benchmark/CMakeFiles/xtp_benchmark_build.dir/build.make xtp/share/benchmark/CMakeFiles/xtp_benchmark_build.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/tools/src/libtools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools/CMakeFiles/votca_tools.dir/DependInfo.cmake --color= +make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'xtp/share/benchmark/CMakeFiles/xtp_benchmark_build.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f tools/scripts/CMakeFiles/votca_compare_manpage.dir/build.make tools/scripts/CMakeFiles/votca_compare_manpage.dir/build -[ 1%] Built target csg_inverse_build -make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'tools/scripts/CMakeFiles/votca_compare_manpage.dir/build'. +[ 0%] Built target csg_call_build +make -f tools/scripts/CMakeFiles/votca_compare_manpage.dir/build.make tools/scripts/CMakeFiles/votca_compare_manpage.dir/depend make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 1%] Built target csg_inverse_build make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/tools/src/libtools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/libtools/CMakeFiles/votca_tools.dir/DependInfo.cmake --color= +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/tools/scripts /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/CMakeFiles/votca_compare_manpage.dir/DependInfo.cmake --color= +make -f tools/src/libtools/CMakeFiles/votca_tools.dir/build.make tools/src/libtools/CMakeFiles/votca_tools.dir/build +[ 1%] Built target xtp_benchmark_build make -f tools/scripts/CMakeFiles/votca_help2doc_manpage.dir/build.make tools/scripts/CMakeFiles/votca_help2doc_manpage.dir/depend -make -f csg/scripts/CMakeFiles/csg_call_manpage.dir/build.make csg/scripts/CMakeFiles/csg_call_manpage.dir/depend make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/tools/scripts /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/CMakeFiles/votca_help2doc_manpage.dir/DependInfo.cmake --color= -[ 1%] Built target csg_call_build +make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f tools/scripts/CMakeFiles/votca_compare_manpage.dir/build.make tools/scripts/CMakeFiles/votca_compare_manpage.dir/build +make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make[3]: Nothing to be done for 'tools/scripts/CMakeFiles/votca_compare_manpage.dir/build'. +make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f csg/scripts/CMakeFiles/csg_call_manpage.dir/build.make csg/scripts/CMakeFiles/csg_call_manpage.dir/depend make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/scripts /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/CMakeFiles/csg_call_manpage.dir/DependInfo.cmake --color= make -f csg/scripts/CMakeFiles/csg_inverse_manpage.dir/build.make csg/scripts/CMakeFiles/csg_inverse_manpage.dir/depend +[ 2%] Built target votca_compare_manpage make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/scripts /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/scripts/CMakeFiles/csg_inverse_manpage.dir/DependInfo.cmake --color= make -f xtp/scripts/CMakeFiles/xtp_basisset_manpage.dir/build.make xtp/scripts/CMakeFiles/xtp_basisset_manpage.dir/depend -[ 1%] Built target xtp_benchmark_build -[ 2%] Built target votca_compare_manpage +make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/scripts /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/scripts /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/scripts/CMakeFiles/xtp_basisset_manpage.dir/DependInfo.cmake --color= -make -f xtp/scripts/CMakeFiles/xtp_update_mapfile_manpage.dir/build.make xtp/scripts/CMakeFiles/xtp_update_mapfile_manpage.dir/depend -make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make -f tools/scripts/CMakeFiles/votca_help2doc_manpage.dir/build.make tools/scripts/CMakeFiles/votca_help2doc_manpage.dir/build -make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/scripts /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/scripts /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/scripts/CMakeFiles/xtp_update_mapfile_manpage.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f tools/src/libtools/CMakeFiles/votca_tools.dir/build.make tools/src/libtools/CMakeFiles/votca_tools.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'tools/scripts/CMakeFiles/votca_help2doc_manpage.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make -f csg/scripts/CMakeFiles/csg_call_manpage.dir/build.make csg/scripts/CMakeFiles/csg_call_manpage.dir/build -make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'csg/scripts/CMakeFiles/csg_call_manpage.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f csg/scripts/CMakeFiles/csg_inverse_manpage.dir/build.make csg/scripts/CMakeFiles/csg_inverse_manpage.dir/build +make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make[3]: Nothing to be done for 'tools/src/libtools/CMakeFiles/votca_tools.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f csg/scripts/CMakeFiles/csg_inverse_manpage.dir/build.make csg/scripts/CMakeFiles/csg_inverse_manpage.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'csg/scripts/CMakeFiles/csg_inverse_manpage.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make -f xtp/scripts/CMakeFiles/xtp_basisset_manpage.dir/build.make xtp/scripts/CMakeFiles/xtp_basisset_manpage.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'xtp/scripts/CMakeFiles/xtp_basisset_manpage.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/scripts/CMakeFiles/xtp_update_mapfile_manpage.dir/build.make xtp/scripts/CMakeFiles/xtp_update_mapfile_manpage.dir/build -make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'xtp/scripts/CMakeFiles/xtp_update_mapfile_manpage.dir/build'. -make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'tools/src/libtools/CMakeFiles/votca_tools.dir/build'. -make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f xtp/scripts/CMakeFiles/xtp_update_mapfile_manpage.dir/build.make xtp/scripts/CMakeFiles/xtp_update_mapfile_manpage.dir/depend [ 2%] Built target votca_help2doc_manpage -[ 2%] Built target csg_call_manpage -make -f xtp/scripts/CMakeFiles/xtp_modify_jobfile_manpage.dir/build.make xtp/scripts/CMakeFiles/xtp_modify_jobfile_manpage.dir/depend [ 8%] Built target votca_tools +[ 8%] Built target csg_inverse_manpage +make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/scripts /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/scripts /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/scripts/CMakeFiles/xtp_update_mapfile_manpage.dir/DependInfo.cmake --color= +make -f xtp/scripts/CMakeFiles/xtp_modify_jobfile_manpage.dir/build.make xtp/scripts/CMakeFiles/xtp_modify_jobfile_manpage.dir/depend [ 8%] Built target xtp_basisset_manpage -make -f xtp/scripts/CMakeFiles/xtp_autogen_mapping_manpage.dir/build.make xtp/scripts/CMakeFiles/xtp_autogen_mapping_manpage.dir/depend make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/scripts/CMakeFiles/xtp_qmmm2qm_manpage.dir/build.make xtp/scripts/CMakeFiles/xtp_qmmm2qm_manpage.dir/depend -[ 8%] Built target csg_inverse_manpage +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/scripts /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/scripts /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/scripts/CMakeFiles/xtp_modify_jobfile_manpage.dir/DependInfo.cmake --color= +make -f xtp/scripts/CMakeFiles/xtp_autogen_mapping_manpage.dir/build.make xtp/scripts/CMakeFiles/xtp_autogen_mapping_manpage.dir/depend make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/scripts /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/scripts /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/scripts/CMakeFiles/xtp_autogen_mapping_manpage.dir/DependInfo.cmake --color= +make -f xtp/scripts/CMakeFiles/xtp_qmmm2qm_manpage.dir/build.make xtp/scripts/CMakeFiles/xtp_qmmm2qm_manpage.dir/depend make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/scripts /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/scripts /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/scripts/CMakeFiles/xtp_qmmm2qm_manpage.dir/DependInfo.cmake --color= make -f tools/src/tests/CMakeFiles/unit_test_calculator.dir/build.make tools/src/tests/CMakeFiles/unit_test_calculator.dir/depend -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/scripts /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/scripts /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/scripts/CMakeFiles/xtp_modify_jobfile_manpage.dir/DependInfo.cmake --color= +make -f tools/src/tests/CMakeFiles/unit_test_constants.dir/build.make tools/src/tests/CMakeFiles/unit_test_constants.dir/depend +[ 8%] Built target csg_call_manpage make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_calculator.dir/DependInfo.cmake --color= -make -f tools/src/tests/CMakeFiles/unit_test_constants.dir/build.make tools/src/tests/CMakeFiles/unit_test_constants.dir/depend -[ 9%] Built target xtp_update_mapfile_manpage -make -f tools/src/tests/CMakeFiles/unit_test_correlate.dir/build.make tools/src/tests/CMakeFiles/unit_test_correlate.dir/depend make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_constants.dir/DependInfo.cmake --color= +make -f tools/src/tests/CMakeFiles/unit_test_correlate.dir/build.make tools/src/tests/CMakeFiles/unit_test_correlate.dir/depend make -f tools/src/tests/CMakeFiles/unit_test_crosscorrelate.dir/build.make tools/src/tests/CMakeFiles/unit_test_crosscorrelate.dir/depend make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_correlate.dir/DependInfo.cmake --color= -Dependencies file "tools/src/tests/CMakeFiles/unit_test_constants.dir/test_constants.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_constants.dir/compiler_depend.internal". -make -f tools/src/tests/CMakeFiles/unit_test_cubicspline.dir/build.make tools/src/tests/CMakeFiles/unit_test_cubicspline.dir/depend make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_crosscorrelate.dir/DependInfo.cmake --color= -make -f tools/src/tests/CMakeFiles/unit_test_datacollection.dir/build.make tools/src/tests/CMakeFiles/unit_test_datacollection.dir/depend -make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f tools/src/tests/CMakeFiles/unit_test_cubicspline.dir/build.make tools/src/tests/CMakeFiles/unit_test_cubicspline.dir/depend make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_cubicspline.dir/DependInfo.cmake --color= -make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -Consolidate compiler generated dependencies of target unit_test_constants +make -f tools/src/tests/CMakeFiles/unit_test_datacollection.dir/build.make tools/src/tests/CMakeFiles/unit_test_datacollection.dir/depend +make -f tools/src/tests/CMakeFiles/unit_test_edge_base.dir/build.make tools/src/tests/CMakeFiles/unit_test_edge_base.dir/depend make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_datacollection.dir/DependInfo.cmake --color= -make -f xtp/scripts/CMakeFiles/xtp_autogen_mapping_manpage.dir/build.make xtp/scripts/CMakeFiles/xtp_autogen_mapping_manpage.dir/build -make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/scripts/CMakeFiles/xtp_qmmm2qm_manpage.dir/build.make xtp/scripts/CMakeFiles/xtp_qmmm2qm_manpage.dir/build +make -f tools/src/tests/CMakeFiles/unit_test_edgecontainer.dir/build.make tools/src/tests/CMakeFiles/unit_test_edgecontainer.dir/depend make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'xtp/scripts/CMakeFiles/xtp_autogen_mapping_manpage.dir/build'. +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_edge_base.dir/DependInfo.cmake --color= +make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_edgecontainer.dir/DependInfo.cmake --color= +make -f tools/src/tests/CMakeFiles/unit_test_elements.dir/build.make tools/src/tests/CMakeFiles/unit_test_elements.dir/depend +Dependencies file "tools/src/tests/CMakeFiles/unit_test_constants.dir/test_constants.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_constants.dir/compiler_depend.internal". +make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_elements.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f xtp/scripts/CMakeFiles/xtp_modify_jobfile_manpage.dir/build.make xtp/scripts/CMakeFiles/xtp_modify_jobfile_manpage.dir/build make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -Dependencies file "tools/src/tests/CMakeFiles/unit_test_calculator.dir/test_calculator.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_calculator.dir/compiler_depend.internal". -make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'xtp/scripts/CMakeFiles/xtp_qmmm2qm_manpage.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -Dependencies file "tools/src/tests/CMakeFiles/unit_test_cubicspline.dir/test_cubicspline.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_cubicspline.dir/compiler_depend.internal". +make -f xtp/scripts/CMakeFiles/xtp_update_mapfile_manpage.dir/build.make xtp/scripts/CMakeFiles/xtp_update_mapfile_manpage.dir/build +Consolidate compiler generated dependencies of target unit_test_constants Dependencies file "tools/src/tests/CMakeFiles/unit_test_correlate.dir/test_correlate.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_correlate.dir/compiler_depend.internal". -Dependencies file "tools/src/tests/CMakeFiles/unit_test_crosscorrelate.dir/test_crosscorrelate.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_crosscorrelate.dir/compiler_depend.internal". -make -f xtp/scripts/CMakeFiles/xtp_modify_jobfile_manpage.dir/build.make xtp/scripts/CMakeFiles/xtp_modify_jobfile_manpage.dir/build -Consolidate compiler generated dependencies of target unit_test_calculator -make -f tools/src/tests/CMakeFiles/unit_test_constants.dir/build.make tools/src/tests/CMakeFiles/unit_test_constants.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'xtp/scripts/CMakeFiles/xtp_modify_jobfile_manpage.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +Dependencies file "tools/src/tests/CMakeFiles/unit_test_calculator.dir/test_calculator.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_calculator.dir/compiler_depend.internal". +Dependencies file "tools/src/tests/CMakeFiles/unit_test_datacollection.dir/test_datacollection.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_datacollection.dir/compiler_depend.internal". +Dependencies file "tools/src/tests/CMakeFiles/unit_test_cubicspline.dir/test_cubicspline.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_cubicspline.dir/compiler_depend.internal". +Dependencies file "tools/src/tests/CMakeFiles/unit_test_crosscorrelate.dir/test_crosscorrelate.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_crosscorrelate.dir/compiler_depend.internal". +make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' Consolidate compiler generated dependencies of target unit_test_cubicspline make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make[3]: Nothing to be done for 'xtp/scripts/CMakeFiles/xtp_update_mapfile_manpage.dir/build'. +make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f xtp/scripts/CMakeFiles/xtp_autogen_mapping_manpage.dir/build.make xtp/scripts/CMakeFiles/xtp_autogen_mapping_manpage.dir/build +make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +Dependencies file "tools/src/tests/CMakeFiles/unit_test_edge_base.dir/test_edge_base.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_edge_base.dir/compiler_depend.internal". +Consolidate compiler generated dependencies of target unit_test_datacollection +make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make[3]: Nothing to be done for 'xtp/scripts/CMakeFiles/xtp_autogen_mapping_manpage.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' Consolidate compiler generated dependencies of target unit_test_crosscorrelate +Dependencies file "tools/src/tests/CMakeFiles/unit_test_elements.dir/test_elements.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_elements.dir/compiler_depend.internal". +make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f xtp/scripts/CMakeFiles/xtp_qmmm2qm_manpage.dir/build.make xtp/scripts/CMakeFiles/xtp_qmmm2qm_manpage.dir/build Consolidate compiler generated dependencies of target unit_test_correlate +Dependencies file "tools/src/tests/CMakeFiles/unit_test_edgecontainer.dir/test_edgecontainer.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_edgecontainer.dir/compiler_depend.internal". +Consolidate compiler generated dependencies of target unit_test_calculator +make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +Consolidate compiler generated dependencies of target unit_test_edge_base +make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make[3]: Nothing to be done for 'xtp/scripts/CMakeFiles/xtp_qmmm2qm_manpage.dir/build'. +make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +Consolidate compiler generated dependencies of target unit_test_elements +make -f tools/src/tests/CMakeFiles/unit_test_constants.dir/build.make tools/src/tests/CMakeFiles/unit_test_constants.dir/build +make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make -f tools/src/tests/CMakeFiles/unit_test_calculator.dir/build.make tools/src/tests/CMakeFiles/unit_test_calculator.dir/build +Consolidate compiler generated dependencies of target unit_test_edgecontainer make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make -f tools/src/tests/CMakeFiles/unit_test_correlate.dir/build.make tools/src/tests/CMakeFiles/unit_test_correlate.dir/build -make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -Dependencies file "tools/src/tests/CMakeFiles/unit_test_datacollection.dir/test_datacollection.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_datacollection.dir/compiler_depend.internal". make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 9%] Built target xtp_autogen_mapping_manpage make[3]: Nothing to be done for 'tools/src/tests/CMakeFiles/unit_test_constants.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -Consolidate compiler generated dependencies of target unit_test_datacollection make -f tools/src/tests/CMakeFiles/unit_test_crosscorrelate.dir/build.make tools/src/tests/CMakeFiles/unit_test_crosscorrelate.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'tools/src/tests/CMakeFiles/unit_test_calculator.dir/build'. +make[3]: Nothing to be done for 'tools/src/tests/CMakeFiles/unit_test_correlate.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make[3]: Nothing to be done for 'tools/src/tests/CMakeFiles/unit_test_calculator.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 10%] Built target xtp_qmmm2qm_manpage make -f tools/src/tests/CMakeFiles/unit_test_cubicspline.dir/build.make tools/src/tests/CMakeFiles/unit_test_cubicspline.dir/build make -f tools/src/tests/CMakeFiles/unit_test_datacollection.dir/build.make tools/src/tests/CMakeFiles/unit_test_datacollection.dir/build +make -f tools/src/tests/CMakeFiles/unit_test_edge_base.dir/build.make tools/src/tests/CMakeFiles/unit_test_edge_base.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'tools/src/tests/CMakeFiles/unit_test_correlate.dir/build'. +make[3]: Nothing to be done for 'tools/src/tests/CMakeFiles/unit_test_cubicspline.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f tools/src/tests/CMakeFiles/unit_test_edgecontainer.dir/build.make tools/src/tests/CMakeFiles/unit_test_edgecontainer.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'tools/src/tests/CMakeFiles/unit_test_cubicspline.dir/build'. +make[3]: Nothing to be done for 'tools/src/tests/CMakeFiles/unit_test_datacollection.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'tools/src/tests/CMakeFiles/unit_test_crosscorrelate.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f tools/src/tests/CMakeFiles/unit_test_elements.dir/build.make tools/src/tests/CMakeFiles/unit_test_elements.dir/build +make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make[3]: Nothing to be done for 'tools/src/tests/CMakeFiles/unit_test_edge_base.dir/build'. +make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'tools/src/tests/CMakeFiles/unit_test_datacollection.dir/build'. +make[3]: Nothing to be done for 'tools/src/tests/CMakeFiles/unit_test_edgecontainer.dir/build'. +make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make[3]: Nothing to be done for 'tools/src/tests/CMakeFiles/unit_test_elements.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 10%] Built target unit_test_constants -[ 10%] Built target xtp_modify_jobfile_manpage +[ 8%] Built target xtp_modify_jobfile_manpage +[ 9%] Built target xtp_update_mapfile_manpage +[ 9%] Built target xtp_autogen_mapping_manpage +[ 9%] Built target unit_test_constants +[ 10%] Built target xtp_qmmm2qm_manpage [ 10%] Built target unit_test_calculator -[ 10%] Built target unit_test_correlate -make -f tools/src/tests/CMakeFiles/unit_test_edge_base.dir/build.make tools/src/tests/CMakeFiles/unit_test_edge_base.dir/depend [ 10%] Built target unit_test_crosscorrelate -make -f tools/src/tests/CMakeFiles/unit_test_edgecontainer.dir/build.make tools/src/tests/CMakeFiles/unit_test_edgecontainer.dir/depend -make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_edge_base.dir/DependInfo.cmake --color= +[ 10%] Built target unit_test_correlate [ 12%] Built target unit_test_cubicspline -make -f tools/src/tests/CMakeFiles/unit_test_elements.dir/build.make tools/src/tests/CMakeFiles/unit_test_elements.dir/depend +[ 12%] Built target unit_test_datacollection make -f tools/src/tests/CMakeFiles/unit_test_filesystem.dir/build.make tools/src/tests/CMakeFiles/unit_test_filesystem.dir/depend -make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_edgecontainer.dir/DependInfo.cmake --color= -make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_elements.dir/DependInfo.cmake --color= +[ 12%] Built target unit_test_edge_base make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_filesystem.dir/DependInfo.cmake --color= make -f tools/src/tests/CMakeFiles/unit_test_floatingpointcomparison.dir/build.make tools/src/tests/CMakeFiles/unit_test_floatingpointcomparison.dir/depend +[ 12%] Built target unit_test_edgecontainer +[ 12%] Built target unit_test_elements make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f tools/src/tests/CMakeFiles/unit_test_graphalgorithm.dir/build.make tools/src/tests/CMakeFiles/unit_test_graphalgorithm.dir/depend cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_floatingpointcomparison.dir/DependInfo.cmake --color= -[ 12%] Built target unit_test_datacollection -Dependencies file "tools/src/tests/CMakeFiles/unit_test_edge_base.dir/test_edge_base.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_edge_base.dir/compiler_depend.internal". +make -f tools/src/tests/CMakeFiles/unit_test_graphalgorithm.dir/build.make tools/src/tests/CMakeFiles/unit_test_graphalgorithm.dir/depend make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_graphalgorithm.dir/DependInfo.cmake --color= make -f tools/src/tests/CMakeFiles/unit_test_graph_base.dir/build.make tools/src/tests/CMakeFiles/unit_test_graph_base.dir/depend make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_graph_base.dir/DependInfo.cmake --color= make -f tools/src/tests/CMakeFiles/unit_test_graph_bf_visitor.dir/build.make tools/src/tests/CMakeFiles/unit_test_graph_bf_visitor.dir/depend -Consolidate compiler generated dependencies of target unit_test_edge_base -make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -Dependencies file "tools/src/tests/CMakeFiles/unit_test_edgecontainer.dir/test_edgecontainer.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_edgecontainer.dir/compiler_depend.internal". -Dependencies file "tools/src/tests/CMakeFiles/unit_test_elements.dir/test_elements.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_elements.dir/compiler_depend.internal". make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_graph_bf_visitor.dir/DependInfo.cmake --color= -make -f tools/src/tests/CMakeFiles/unit_test_edge_base.dir/build.make tools/src/tests/CMakeFiles/unit_test_edge_base.dir/build -Consolidate compiler generated dependencies of target unit_test_edgecontainer +make -f tools/src/tests/CMakeFiles/unit_test_graph_df_visitor.dir/build.make tools/src/tests/CMakeFiles/unit_test_graph_df_visitor.dir/depend Dependencies file "tools/src/tests/CMakeFiles/unit_test_filesystem.dir/test_filesystem.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_filesystem.dir/compiler_depend.internal". -Dependencies file "tools/src/tests/CMakeFiles/unit_test_graph_base.dir/test_graph_base.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_graph_base.dir/compiler_depend.internal". -Dependencies file "tools/src/tests/CMakeFiles/unit_test_floatingpointcomparison.dir/test_floatingpointcomparison.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_floatingpointcomparison.dir/compiler_depend.internal". -make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -Consolidate compiler generated dependencies of target unit_test_elements -make -f tools/src/tests/CMakeFiles/unit_test_edgecontainer.dir/build.make tools/src/tests/CMakeFiles/unit_test_edgecontainer.dir/build +make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_graph_df_visitor.dir/DependInfo.cmake --color= +make -f tools/src/tests/CMakeFiles/unit_test_graphdistvisitor.dir/build.make tools/src/tests/CMakeFiles/unit_test_graphdistvisitor.dir/depend Consolidate compiler generated dependencies of target unit_test_filesystem -Dependencies file "tools/src/tests/CMakeFiles/unit_test_graphalgorithm.dir/test_graphalgorithm.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_graphalgorithm.dir/compiler_depend.internal". -Consolidate compiler generated dependencies of target unit_test_floatingpointcomparison -Consolidate compiler generated dependencies of target unit_test_graph_base -make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +Dependencies file "tools/src/tests/CMakeFiles/unit_test_graph_bf_visitor.dir/test_graph_bf_visitor.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_graph_bf_visitor.dir/compiler_depend.internal". make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +Dependencies file "tools/src/tests/CMakeFiles/unit_test_floatingpointcomparison.dir/test_floatingpointcomparison.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_floatingpointcomparison.dir/compiler_depend.internal". make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'tools/src/tests/CMakeFiles/unit_test_edge_base.dir/build'. -make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_graphdistvisitor.dir/DependInfo.cmake --color= +Consolidate compiler generated dependencies of target unit_test_graph_bf_visitor +make -f tools/src/tests/CMakeFiles/unit_test_filesystem.dir/build.make tools/src/tests/CMakeFiles/unit_test_filesystem.dir/build make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f tools/src/tests/CMakeFiles/unit_test_elements.dir/build.make tools/src/tests/CMakeFiles/unit_test_elements.dir/build -Consolidate compiler generated dependencies of target unit_test_graphalgorithm -Dependencies file "tools/src/tests/CMakeFiles/unit_test_graph_bf_visitor.dir/test_graph_bf_visitor.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_graph_bf_visitor.dir/compiler_depend.internal". +Dependencies file "tools/src/tests/CMakeFiles/unit_test_graph_base.dir/test_graph_base.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_graph_base.dir/compiler_depend.internal". +make -f tools/src/tests/CMakeFiles/unit_test_graph_bf_visitor.dir/build.make tools/src/tests/CMakeFiles/unit_test_graph_bf_visitor.dir/build +Consolidate compiler generated dependencies of target unit_test_floatingpointcomparison make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'tools/src/tests/CMakeFiles/unit_test_edgecontainer.dir/build'. +make[3]: Nothing to be done for 'tools/src/tests/CMakeFiles/unit_test_filesystem.dir/build'. +make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +Consolidate compiler generated dependencies of target unit_test_graph_base make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f tools/src/tests/CMakeFiles/unit_test_filesystem.dir/build.make tools/src/tests/CMakeFiles/unit_test_filesystem.dir/build make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +Dependencies file "tools/src/tests/CMakeFiles/unit_test_graphalgorithm.dir/test_graphalgorithm.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_graphalgorithm.dir/compiler_depend.internal". make -f tools/src/tests/CMakeFiles/unit_test_floatingpointcomparison.dir/build.make tools/src/tests/CMakeFiles/unit_test_floatingpointcomparison.dir/build +Dependencies file "tools/src/tests/CMakeFiles/unit_test_graphdistvisitor.dir/test_graphdistvisitor.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_graphdistvisitor.dir/compiler_depend.internal". +Dependencies file "tools/src/tests/CMakeFiles/unit_test_graph_df_visitor.dir/test_graph_df_visitor.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_graph_df_visitor.dir/compiler_depend.internal". +make -f tools/src/tests/CMakeFiles/unit_test_graph_base.dir/build.make tools/src/tests/CMakeFiles/unit_test_graph_base.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'tools/src/tests/CMakeFiles/unit_test_filesystem.dir/build'. +make[3]: Nothing to be done for 'tools/src/tests/CMakeFiles/unit_test_floatingpointcomparison.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -Consolidate compiler generated dependencies of target unit_test_graph_bf_visitor -make -f tools/src/tests/CMakeFiles/unit_test_graphalgorithm.dir/build.make tools/src/tests/CMakeFiles/unit_test_graphalgorithm.dir/build -make -f tools/src/tests/CMakeFiles/unit_test_graph_base.dir/build.make tools/src/tests/CMakeFiles/unit_test_graph_base.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'tools/src/tests/CMakeFiles/unit_test_elements.dir/build'. +make[3]: Nothing to be done for 'tools/src/tests/CMakeFiles/unit_test_graph_bf_visitor.dir/build'. +make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +Consolidate compiler generated dependencies of target unit_test_graphalgorithm +Consolidate compiler generated dependencies of target unit_test_graphdistvisitor +Consolidate compiler generated dependencies of target unit_test_graph_df_visitor +make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f tools/src/tests/CMakeFiles/unit_test_graph_bf_visitor.dir/build.make tools/src/tests/CMakeFiles/unit_test_graph_bf_visitor.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'tools/src/tests/CMakeFiles/unit_test_floatingpointcomparison.dir/build'. +make[3]: Nothing to be done for 'tools/src/tests/CMakeFiles/unit_test_graph_base.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f tools/src/tests/CMakeFiles/unit_test_graphalgorithm.dir/build.make tools/src/tests/CMakeFiles/unit_test_graphalgorithm.dir/build +make -f tools/src/tests/CMakeFiles/unit_test_graph_df_visitor.dir/build.make tools/src/tests/CMakeFiles/unit_test_graph_df_visitor.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f tools/src/tests/CMakeFiles/unit_test_graphdistvisitor.dir/build.make tools/src/tests/CMakeFiles/unit_test_graphdistvisitor.dir/build make[3]: Nothing to be done for 'tools/src/tests/CMakeFiles/unit_test_graphalgorithm.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 12%] Built target unit_test_filesystem make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'tools/src/tests/CMakeFiles/unit_test_graph_base.dir/build'. +make[3]: Nothing to be done for 'tools/src/tests/CMakeFiles/unit_test_graph_df_visitor.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'tools/src/tests/CMakeFiles/unit_test_graph_bf_visitor.dir/build'. +make[3]: Nothing to be done for 'tools/src/tests/CMakeFiles/unit_test_graphdistvisitor.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 12%] Built target unit_test_edge_base -[ 12%] Built target unit_test_edgecontainer -[ 12%] Built target unit_test_elements -[ 12%] Built target unit_test_filesystem [ 12%] Built target unit_test_floatingpointcomparison -make -f tools/src/tests/CMakeFiles/unit_test_graph_df_visitor.dir/build.make tools/src/tests/CMakeFiles/unit_test_graph_df_visitor.dir/depend -[ 12%] Built target unit_test_graphalgorithm +[ 12%] Built target unit_test_graph_bf_visitor [ 13%] Built target unit_test_graph_base -make -f tools/src/tests/CMakeFiles/unit_test_graphdistvisitor.dir/build.make tools/src/tests/CMakeFiles/unit_test_graphdistvisitor.dir/depend -make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_graph_df_visitor.dir/DependInfo.cmake --color= make -f tools/src/tests/CMakeFiles/unit_test_graphnode.dir/build.make tools/src/tests/CMakeFiles/unit_test_graphnode.dir/depend -make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_graphdistvisitor.dir/DependInfo.cmake --color= -[ 13%] Built target unit_test_graph_bf_visitor +[ 13%] Built target unit_test_graphalgorithm make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_graphnode.dir/DependInfo.cmake --color= make -f tools/src/tests/CMakeFiles/unit_test_graphvisitor.dir/build.make tools/src/tests/CMakeFiles/unit_test_graphvisitor.dir/depend -make -f tools/src/tests/CMakeFiles/unit_test_histogramnew.dir/build.make tools/src/tests/CMakeFiles/unit_test_histogramnew.dir/depend +[ 13%] Built target unit_test_graph_df_visitor make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_graphvisitor.dir/DependInfo.cmake --color= +make -f tools/src/tests/CMakeFiles/unit_test_histogramnew.dir/build.make tools/src/tests/CMakeFiles/unit_test_histogramnew.dir/depend +Dependencies file "tools/src/tests/CMakeFiles/unit_test_graphnode.dir/test_graphnode.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_graphnode.dir/compiler_depend.internal". make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_histogramnew.dir/DependInfo.cmake --color= -Dependencies file "tools/src/tests/CMakeFiles/unit_test_graph_df_visitor.dir/test_graph_df_visitor.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_graph_df_visitor.dir/compiler_depend.internal". +[ 13%] Built target unit_test_graphdistvisitor make -f tools/src/tests/CMakeFiles/unit_test_identity.dir/build.make tools/src/tests/CMakeFiles/unit_test_identity.dir/depend +Consolidate compiler generated dependencies of target unit_test_graphnode +make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_identity.dir/DependInfo.cmake --color= -Dependencies file "tools/src/tests/CMakeFiles/unit_test_graphdistvisitor.dir/test_graphdistvisitor.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_graphdistvisitor.dir/compiler_depend.internal". +make -f tools/src/tests/CMakeFiles/unit_test_graphnode.dir/build.make tools/src/tests/CMakeFiles/unit_test_graphnode.dir/build +Dependencies file "tools/src/tests/CMakeFiles/unit_test_histogramnew.dir/test_histogramnew.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_histogramnew.dir/compiler_depend.internal". make -f tools/src/tests/CMakeFiles/unit_test_linalg.dir/build.make tools/src/tests/CMakeFiles/unit_test_linalg.dir/depend -make -f tools/src/tests/CMakeFiles/unit_test_name.dir/build.make tools/src/tests/CMakeFiles/unit_test_name.dir/depend +Consolidate compiler generated dependencies of target unit_test_histogramnew +make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +Dependencies file "tools/src/tests/CMakeFiles/unit_test_graphvisitor.dir/test_graphvisitor.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_graphvisitor.dir/compiler_depend.internal". make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_linalg.dir/DependInfo.cmake --color= -make -f tools/src/tests/CMakeFiles/unit_test_objectfactory.dir/build.make tools/src/tests/CMakeFiles/unit_test_objectfactory.dir/depend +make -f tools/src/tests/CMakeFiles/unit_test_histogramnew.dir/build.make tools/src/tests/CMakeFiles/unit_test_histogramnew.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_name.dir/DependInfo.cmake --color= -Consolidate compiler generated dependencies of target unit_test_graph_df_visitor -Consolidate compiler generated dependencies of target unit_test_graphdistvisitor -Dependencies file "tools/src/tests/CMakeFiles/unit_test_graphnode.dir/test_graphnode.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_graphnode.dir/compiler_depend.internal". -make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make[3]: Nothing to be done for 'tools/src/tests/CMakeFiles/unit_test_graphnode.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f tools/src/tests/CMakeFiles/unit_test_graph_df_visitor.dir/build.make tools/src/tests/CMakeFiles/unit_test_graph_df_visitor.dir/build -make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_objectfactory.dir/DependInfo.cmake --color= -Consolidate compiler generated dependencies of target unit_test_graphnode +Consolidate compiler generated dependencies of target unit_test_graphvisitor make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f tools/src/tests/CMakeFiles/unit_test_graphdistvisitor.dir/build.make tools/src/tests/CMakeFiles/unit_test_graphdistvisitor.dir/build -Dependencies file "tools/src/tests/CMakeFiles/unit_test_objectfactory.dir/test_objectfactory.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_objectfactory.dir/compiler_depend.internal". +Dependencies file "tools/src/tests/CMakeFiles/unit_test_identity.dir/test_identity.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_identity.dir/compiler_depend.internal". make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'tools/src/tests/CMakeFiles/unit_test_graph_df_visitor.dir/build'. +make[3]: Nothing to be done for 'tools/src/tests/CMakeFiles/unit_test_histogramnew.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f tools/src/tests/CMakeFiles/unit_test_graphvisitor.dir/build.make tools/src/tests/CMakeFiles/unit_test_graphvisitor.dir/build Dependencies file "tools/src/tests/CMakeFiles/unit_test_linalg.dir/test_linalg.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_linalg.dir/compiler_depend.internal". -Dependencies file "tools/src/tests/CMakeFiles/unit_test_graphvisitor.dir/test_graphvisitor.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_graphvisitor.dir/compiler_depend.internal". -Dependencies file "tools/src/tests/CMakeFiles/unit_test_name.dir/test_name.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_name.dir/compiler_depend.internal". -Consolidate compiler generated dependencies of target unit_test_objectfactory -Consolidate compiler generated dependencies of target unit_test_name -make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -Dependencies file "tools/src/tests/CMakeFiles/unit_test_histogramnew.dir/test_histogramnew.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_histogramnew.dir/compiler_depend.internal". -make -f tools/src/tests/CMakeFiles/unit_test_graphnode.dir/build.make tools/src/tests/CMakeFiles/unit_test_graphnode.dir/build -Consolidate compiler generated dependencies of target unit_test_linalg -Dependencies file "tools/src/tests/CMakeFiles/unit_test_identity.dir/test_identity.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_identity.dir/compiler_depend.internal". -make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f tools/src/tests/CMakeFiles/unit_test_name.dir/build.make tools/src/tests/CMakeFiles/unit_test_name.dir/build -Consolidate compiler generated dependencies of target unit_test_graphvisitor -Consolidate compiler generated dependencies of target unit_test_histogramnew make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'tools/src/tests/CMakeFiles/unit_test_graphdistvisitor.dir/build'. +make[3]: Nothing to be done for 'tools/src/tests/CMakeFiles/unit_test_graphvisitor.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 15%] Built target unit_test_graphnode Consolidate compiler generated dependencies of target unit_test_identity +Consolidate compiler generated dependencies of target unit_test_linalg make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f tools/src/tests/CMakeFiles/unit_test_graphvisitor.dir/build.make tools/src/tests/CMakeFiles/unit_test_graphvisitor.dir/build -make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'tools/src/tests/CMakeFiles/unit_test_name.dir/build'. -make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f tools/src/tests/CMakeFiles/unit_test_histogramnew.dir/build.make tools/src/tests/CMakeFiles/unit_test_histogramnew.dir/build make -f tools/src/tests/CMakeFiles/unit_test_identity.dir/build.make tools/src/tests/CMakeFiles/unit_test_identity.dir/build -make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'tools/src/tests/CMakeFiles/unit_test_graphnode.dir/build'. -make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make -f tools/src/tests/CMakeFiles/unit_test_linalg.dir/build.make tools/src/tests/CMakeFiles/unit_test_linalg.dir/build +[ 15%] Built target unit_test_graphvisitor +make -f tools/src/tests/CMakeFiles/unit_test_name.dir/build.make tools/src/tests/CMakeFiles/unit_test_name.dir/depend +[ 15%] Built target unit_test_histogramnew +make -f tools/src/tests/CMakeFiles/unit_test_objectfactory.dir/build.make tools/src/tests/CMakeFiles/unit_test_objectfactory.dir/depend make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'tools/src/tests/CMakeFiles/unit_test_graphvisitor.dir/build'. -make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f tools/src/tests/CMakeFiles/unit_test_objectfactory.dir/build.make tools/src/tests/CMakeFiles/unit_test_objectfactory.dir/build -make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'tools/src/tests/CMakeFiles/unit_test_histogramnew.dir/build'. -make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_name.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'tools/src/tests/CMakeFiles/unit_test_identity.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'tools/src/tests/CMakeFiles/unit_test_objectfactory.dir/build'. -make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'tools/src/tests/CMakeFiles/unit_test_linalg.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 13%] Built target unit_test_graph_df_visitor -[ 13%] Built target unit_test_graphdistvisitor -[ 13%] Built target unit_test_name -[ 15%] Built target unit_test_graphnode -[ 15%] Built target unit_test_graphvisitor -[ 15%] Built target unit_test_histogramnew +make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_objectfactory.dir/DependInfo.cmake --color= make -f tools/src/tests/CMakeFiles/unit_test_optionshandler.dir/build.make tools/src/tests/CMakeFiles/unit_test_optionshandler.dir/depend -[ 15%] Built target unit_test_identity +make -f tools/src/tests/CMakeFiles/unit_test_property.dir/build.make tools/src/tests/CMakeFiles/unit_test_property.dir/depend make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +Dependencies file "tools/src/tests/CMakeFiles/unit_test_name.dir/test_name.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_name.dir/compiler_depend.internal". cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_optionshandler.dir/DependInfo.cmake --color= -make -f tools/src/tests/CMakeFiles/unit_test_property.dir/build.make tools/src/tests/CMakeFiles/unit_test_property.dir/depend make -f tools/src/tests/CMakeFiles/unit_test_reducededge.dir/build.make tools/src/tests/CMakeFiles/unit_test_reducededge.dir/depend make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_property.dir/DependInfo.cmake --color= make -f tools/src/tests/CMakeFiles/unit_test_reducedgraph.dir/build.make tools/src/tests/CMakeFiles/unit_test_reducedgraph.dir/depend make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_reducededge.dir/DependInfo.cmake --color= -make -f tools/src/tests/CMakeFiles/unit_test_structureparameters.dir/build.make tools/src/tests/CMakeFiles/unit_test_structureparameters.dir/depend +Consolidate compiler generated dependencies of target unit_test_name +[ 15%] Built target unit_test_identity +make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +Dependencies file "tools/src/tests/CMakeFiles/unit_test_objectfactory.dir/test_objectfactory.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_objectfactory.dir/compiler_depend.internal". make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_reducedgraph.dir/DependInfo.cmake --color= -make -f tools/src/tests/CMakeFiles/unit_test_table.dir/build.make tools/src/tests/CMakeFiles/unit_test_table.dir/depend -make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_structureparameters.dir/DependInfo.cmake --color= [ 15%] Built target unit_test_linalg +make -f tools/src/tests/CMakeFiles/unit_test_name.dir/build.make tools/src/tests/CMakeFiles/unit_test_name.dir/build +Consolidate compiler generated dependencies of target unit_test_objectfactory +make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f tools/src/tests/CMakeFiles/unit_test_objectfactory.dir/build.make tools/src/tests/CMakeFiles/unit_test_objectfactory.dir/build Dependencies file "tools/src/tests/CMakeFiles/unit_test_optionshandler.dir/test_optionshandler.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_optionshandler.dir/compiler_depend.internal". -make -f tools/src/tests/CMakeFiles/unit_test_thread.dir/build.make tools/src/tests/CMakeFiles/unit_test_thread.dir/depend -Consolidate compiler generated dependencies of target unit_test_optionshandler +Dependencies file "tools/src/tests/CMakeFiles/unit_test_property.dir/test_property.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_property.dir/compiler_depend.internal". make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_table.dir/DependInfo.cmake --color= +make[3]: Nothing to be done for 'tools/src/tests/CMakeFiles/unit_test_name.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 15%] Built target unit_test_objectfactory -Dependencies file "tools/src/tests/CMakeFiles/unit_test_reducededge.dir/test_reducededge.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_reducededge.dir/compiler_depend.internal". +Consolidate compiler generated dependencies of target unit_test_optionshandler +Consolidate compiler generated dependencies of target unit_test_property make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_thread.dir/DependInfo.cmake --color= +make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make[3]: Nothing to be done for 'tools/src/tests/CMakeFiles/unit_test_objectfactory.dir/build'. +make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make -f tools/src/tests/CMakeFiles/unit_test_optionshandler.dir/build.make tools/src/tests/CMakeFiles/unit_test_optionshandler.dir/build -Dependencies file "tools/src/tests/CMakeFiles/unit_test_property.dir/test_property.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_property.dir/compiler_depend.internal". -make -f tools/src/tests/CMakeFiles/unit_test_tokenizer.dir/build.make tools/src/tests/CMakeFiles/unit_test_tokenizer.dir/depend +Dependencies file "tools/src/tests/CMakeFiles/unit_test_reducededge.dir/test_reducededge.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_reducededge.dir/compiler_depend.internal". +make -f tools/src/tests/CMakeFiles/unit_test_property.dir/build.make tools/src/tests/CMakeFiles/unit_test_property.dir/build +Dependencies file "tools/src/tests/CMakeFiles/unit_test_reducedgraph.dir/test_reducedgraph.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_reducedgraph.dir/compiler_depend.internal". +[ 15%] Built target unit_test_name +Consolidate compiler generated dependencies of target unit_test_reducedgraph +make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' Consolidate compiler generated dependencies of target unit_test_reducededge make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -Dependencies file "tools/src/tests/CMakeFiles/unit_test_reducedgraph.dir/test_reducedgraph.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_reducedgraph.dir/compiler_depend.internal". make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_tokenizer.dir/DependInfo.cmake --color= +make[3]: Nothing to be done for 'tools/src/tests/CMakeFiles/unit_test_property.dir/build'. +make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make -f tools/src/tests/CMakeFiles/unit_test_reducededge.dir/build.make tools/src/tests/CMakeFiles/unit_test_reducededge.dir/build -Consolidate compiler generated dependencies of target unit_test_reducedgraph -Consolidate compiler generated dependencies of target unit_test_property -Dependencies file "tools/src/tests/CMakeFiles/unit_test_structureparameters.dir/test_structureparameters.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_structureparameters.dir/compiler_depend.internal". -make -f tools/src/tests/CMakeFiles/unit_test_random.dir/build.make tools/src/tests/CMakeFiles/unit_test_random.dir/depend +make -f tools/src/tests/CMakeFiles/unit_test_reducedgraph.dir/build.make tools/src/tests/CMakeFiles/unit_test_reducedgraph.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'tools/src/tests/CMakeFiles/unit_test_optionshandler.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -Dependencies file "tools/src/tests/CMakeFiles/unit_test_table.dir/test_table.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_table.dir/compiler_depend.internal". make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_random.dir/DependInfo.cmake --color= -make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make[3]: Nothing to be done for 'tools/src/tests/CMakeFiles/unit_test_reducededge.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -Dependencies file "tools/src/tests/CMakeFiles/unit_test_thread.dir/test_thread.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_thread.dir/compiler_depend.internal". -make -f tools/src/tests/CMakeFiles/unit_test_akimaspline.dir/build.make tools/src/tests/CMakeFiles/unit_test_akimaspline.dir/depend -Consolidate compiler generated dependencies of target unit_test_structureparameters +[ 15%] Built target unit_test_objectfactory make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'tools/src/tests/CMakeFiles/unit_test_reducededge.dir/build'. +make[3]: Nothing to be done for 'tools/src/tests/CMakeFiles/unit_test_reducedgraph.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 15%] Built target unit_test_optionshandler +make -f tools/src/tests/CMakeFiles/unit_test_structureparameters.dir/build.make tools/src/tests/CMakeFiles/unit_test_structureparameters.dir/depend +[ 16%] Built target unit_test_reducededge +[ 16%] Built target unit_test_property +make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_structureparameters.dir/DependInfo.cmake --color= +make -f tools/src/tests/CMakeFiles/unit_test_table.dir/build.make tools/src/tests/CMakeFiles/unit_test_table.dir/depend +[ 16%] Built target unit_test_reducedgraph +make -f tools/src/tests/CMakeFiles/unit_test_thread.dir/build.make tools/src/tests/CMakeFiles/unit_test_thread.dir/depend +make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_table.dir/DependInfo.cmake --color= +Dependencies file "tools/src/tests/CMakeFiles/unit_test_structureparameters.dir/test_structureparameters.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_structureparameters.dir/compiler_depend.internal". +Consolidate compiler generated dependencies of target unit_test_structureparameters +make -f tools/src/tests/CMakeFiles/unit_test_tokenizer.dir/build.make tools/src/tests/CMakeFiles/unit_test_tokenizer.dir/depend make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -Consolidate compiler generated dependencies of target unit_test_table -Consolidate compiler generated dependencies of target unit_test_thread make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_akimaspline.dir/DependInfo.cmake --color= -[ 15%] Built target unit_test_optionshandler -make -f tools/src/tests/CMakeFiles/unit_test_property.dir/build.make tools/src/tests/CMakeFiles/unit_test_property.dir/build -make -f tools/src/tests/CMakeFiles/unit_test_reducedgraph.dir/build.make tools/src/tests/CMakeFiles/unit_test_reducedgraph.dir/build +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_thread.dir/DependInfo.cmake --color= make -f tools/src/tests/CMakeFiles/unit_test_structureparameters.dir/build.make tools/src/tests/CMakeFiles/unit_test_structureparameters.dir/build +make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_tokenizer.dir/DependInfo.cmake --color= +Dependencies file "tools/src/tests/CMakeFiles/unit_test_table.dir/test_table.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_table.dir/compiler_depend.internal". +make -f tools/src/tests/CMakeFiles/unit_test_random.dir/build.make tools/src/tests/CMakeFiles/unit_test_random.dir/depend +Dependencies file "tools/src/tests/CMakeFiles/unit_test_thread.dir/test_thread.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_thread.dir/compiler_depend.internal". +make -f tools/src/tests/CMakeFiles/unit_test_akimaspline.dir/build.make tools/src/tests/CMakeFiles/unit_test_akimaspline.dir/depend +make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_random.dir/DependInfo.cmake --color= +Consolidate compiler generated dependencies of target unit_test_thread +Consolidate compiler generated dependencies of target unit_test_table make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -Dependencies file "tools/src/tests/CMakeFiles/unit_test_tokenizer.dir/test_tokenizer.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_tokenizer.dir/compiler_depend.internal". make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -Dependencies file "tools/src/tests/CMakeFiles/unit_test_random.dir/test_random.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_random.dir/compiler_depend.internal". make -f tools/src/tests/CMakeFiles/unit_test_table.dir/build.make tools/src/tests/CMakeFiles/unit_test_table.dir/build -Consolidate compiler generated dependencies of target unit_test_tokenizer -make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'tools/src/tests/CMakeFiles/unit_test_reducedgraph.dir/build'. -make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -Consolidate compiler generated dependencies of target unit_test_random make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'tools/src/tests/CMakeFiles/unit_test_property.dir/build'. -make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_akimaspline.dir/DependInfo.cmake --color= make -f tools/src/tests/CMakeFiles/unit_test_thread.dir/build.make tools/src/tests/CMakeFiles/unit_test_thread.dir/build +make -f tools/src/tests/CMakeFiles/unit_test_linspline.dir/build.make tools/src/tests/CMakeFiles/unit_test_linspline.dir/depend make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'tools/src/tests/CMakeFiles/unit_test_structureparameters.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make[3]: Nothing to be done for 'tools/src/tests/CMakeFiles/unit_test_table.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_linspline.dir/DependInfo.cmake --color= +make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make[3]: Nothing to be done for 'tools/src/tests/CMakeFiles/unit_test_thread.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +Dependencies file "tools/src/tests/CMakeFiles/unit_test_tokenizer.dir/test_tokenizer.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_tokenizer.dir/compiler_depend.internal". Dependencies file "tools/src/tests/CMakeFiles/unit_test_akimaspline.dir/test_akimaspline.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_akimaspline.dir/compiler_depend.internal". -make -f tools/src/tests/CMakeFiles/unit_test_tokenizer.dir/build.make tools/src/tests/CMakeFiles/unit_test_tokenizer.dir/build Consolidate compiler generated dependencies of target unit_test_akimaspline make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'tools/src/tests/CMakeFiles/unit_test_table.dir/build'. +Consolidate compiler generated dependencies of target unit_test_tokenizer +Dependencies file "tools/src/tests/CMakeFiles/unit_test_random.dir/test_random.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_random.dir/compiler_depend.internal". +make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f tools/src/tests/CMakeFiles/unit_test_akimaspline.dir/build.make tools/src/tests/CMakeFiles/unit_test_akimaspline.dir/build +Dependencies file "tools/src/tests/CMakeFiles/unit_test_linspline.dir/test_linspline.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_linspline.dir/compiler_depend.internal". +make -f tools/src/tests/CMakeFiles/unit_test_tokenizer.dir/build.make tools/src/tests/CMakeFiles/unit_test_tokenizer.dir/build +Consolidate compiler generated dependencies of target unit_test_random +Consolidate compiler generated dependencies of target unit_test_linspline +[ 16%] Built target unit_test_table make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'tools/src/tests/CMakeFiles/unit_test_thread.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make -f tools/src/tests/CMakeFiles/unit_test_random.dir/build.make tools/src/tests/CMakeFiles/unit_test_random.dir/build -make -f tools/src/tests/CMakeFiles/unit_test_akimaspline.dir/build.make tools/src/tests/CMakeFiles/unit_test_akimaspline.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'tools/src/tests/CMakeFiles/unit_test_tokenizer.dir/build'. +make[3]: Nothing to be done for 'tools/src/tests/CMakeFiles/unit_test_akimaspline.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 17%] Built target unit_test_structureparameters make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'tools/src/tests/CMakeFiles/unit_test_random.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 16%] Built target unit_test_reducededge make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'tools/src/tests/CMakeFiles/unit_test_akimaspline.dir/build'. +make[3]: Nothing to be done for 'tools/src/tests/CMakeFiles/unit_test_tokenizer.dir/build'. +make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f tools/src/tests/CMakeFiles/unit_test_linspline.dir/build.make tools/src/tests/CMakeFiles/unit_test_linspline.dir/build +make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make[3]: Nothing to be done for 'tools/src/tests/CMakeFiles/unit_test_linspline.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 16%] Built target unit_test_property -[ 16%] Built target unit_test_reducedgraph -[ 16%] Built target unit_test_table -[ 17%] Built target unit_test_structureparameters -make -f tools/src/tests/CMakeFiles/unit_test_linspline.dir/build.make tools/src/tests/CMakeFiles/unit_test_linspline.dir/depend [ 19%] Built target unit_test_thread +[ 19%] Built target unit_test_akimaspline +make -f tools/src/tests/CMakeFiles/unit_test_unitconverter.dir/build.make tools/src/tests/CMakeFiles/unit_test_unitconverter.dir/depend [ 19%] Built target unit_test_tokenizer [ 19%] Built target unit_test_random make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_linspline.dir/DependInfo.cmake --color= -make -f tools/src/tests/CMakeFiles/unit_test_unitconverter.dir/build.make tools/src/tests/CMakeFiles/unit_test_unitconverter.dir/depend -make -f tools/src/tests/CMakeFiles/unit_test_NDimVector.dir/build.make tools/src/tests/CMakeFiles/unit_test_NDimVector.dir/depend -make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_unitconverter.dir/DependInfo.cmake --color= -[ 19%] Built target unit_test_akimaspline +make -f tools/src/tests/CMakeFiles/unit_test_NDimVector.dir/build.make tools/src/tests/CMakeFiles/unit_test_NDimVector.dir/depend make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_NDimVector.dir/DependInfo.cmake --color= make -f tools/src/tests/CMakeFiles/unit_test_eigenio_matrixmarket.dir/build.make tools/src/tests/CMakeFiles/unit_test_eigenio_matrixmarket.dir/depend +make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_eigenio_matrixmarket.dir/DependInfo.cmake --color= +[ 19%] Built target unit_test_linspline Dependencies file "tools/src/tests/CMakeFiles/unit_test_unitconverter.dir/test_unitconverter.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_unitconverter.dir/compiler_depend.internal". -Dependencies file "tools/src/tests/CMakeFiles/unit_test_linspline.dir/test_linspline.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_linspline.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target unit_test_unitconverter make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make -f tools/src/tests/CMakeFiles/unit_test_unitconverter.dir/build.make tools/src/tests/CMakeFiles/unit_test_unitconverter.dir/build -make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_eigenio_matrixmarket.dir/DependInfo.cmake --color= -Consolidate compiler generated dependencies of target unit_test_linspline make -f csg/src/libcsg/CMakeFiles/votca_csg.dir/build.make csg/src/libcsg/CMakeFiles/votca_csg.dir/depend -make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'tools/src/tests/CMakeFiles/unit_test_unitconverter.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -Dependencies file "tools/src/tests/CMakeFiles/unit_test_NDimVector.dir/test_NDimVector.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_NDimVector.dir/compiler_depend.internal". -make -f tools/src/tests/CMakeFiles/unit_test_linspline.dir/build.make tools/src/tests/CMakeFiles/unit_test_linspline.dir/build -Consolidate compiler generated dependencies of target unit_test_NDimVector -make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f tools/src/tests/CMakeFiles/unit_test_NDimVector.dir/build.make tools/src/tests/CMakeFiles/unit_test_NDimVector.dir/build Dependencies file "tools/src/tests/CMakeFiles/unit_test_eigenio_matrixmarket.dir/test_eigenio_matrixmarket.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_eigenio_matrixmarket.dir/compiler_depend.internal". -make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'tools/src/tests/CMakeFiles/unit_test_linspline.dir/build'. -make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -Consolidate compiler generated dependencies of target unit_test_eigenio_matrixmarket +Dependencies file "tools/src/tests/CMakeFiles/unit_test_NDimVector.dir/test_NDimVector.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_NDimVector.dir/compiler_depend.internal". make -f tools/src/tools/CMakeFiles/votca_property.dir/build.make tools/src/tools/CMakeFiles/votca_property.dir/depend +Consolidate compiler generated dependencies of target unit_test_eigenio_matrixmarket make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make -f tools/src/tests/CMakeFiles/unit_test_eigenio_matrixmarket.dir/build.make tools/src/tests/CMakeFiles/unit_test_eigenio_matrixmarket.dir/build +[ 19%] Built target unit_test_unitconverter +Consolidate compiler generated dependencies of target unit_test_NDimVector make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'tools/src/tests/CMakeFiles/unit_test_NDimVector.dir/build'. +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/tools/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tools/CMakeFiles/votca_property.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 19%] Built target unit_test_unitconverter +make -f tools/src/tests/CMakeFiles/unit_test_NDimVector.dir/build.make tools/src/tests/CMakeFiles/unit_test_NDimVector.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'tools/src/tests/CMakeFiles/unit_test_eigenio_matrixmarket.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/tools/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tools/CMakeFiles/votca_property.dir/DependInfo.cmake --color= -[ 19%] Built target unit_test_linspline -[ 19%] Built target unit_test_eigenio_matrixmarket +make[3]: Nothing to be done for 'tools/src/tests/CMakeFiles/unit_test_NDimVector.dir/build'. +make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 20%] Built target unit_test_NDimVector make -f tools/src/tools/CMakeFiles/votca_property.dir/build.make tools/src/tools/CMakeFiles/votca_property.dir/build +[ 20%] Built target unit_test_NDimVector make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'tools/src/tools/CMakeFiles/votca_property.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/libcsg /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/libcsg/CMakeFiles/votca_csg.dir/DependInfo.cmake --color= +[ 20%] Built target unit_test_eigenio_matrixmarket [ 21%] Built target votca_property make -f tools/src/tools/CMakeFiles/votca_property_manpage.dir/build.make tools/src/tools/CMakeFiles/votca_property_manpage.dir/depend make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/tools/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tools/CMakeFiles/votca_property_manpage.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f csg/src/libcsg/CMakeFiles/votca_csg.dir/build.make csg/src/libcsg/CMakeFiles/votca_csg.dir/build +make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make -f tools/src/tools/CMakeFiles/votca_property_manpage.dir/build.make tools/src/tools/CMakeFiles/votca_property_manpage.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'tools/src/tools/CMakeFiles/votca_property_manpage.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f csg/src/libcsg/CMakeFiles/votca_csg.dir/build.make csg/src/libcsg/CMakeFiles/votca_csg.dir/build [ 21%] Built target votca_property_manpage make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'csg/src/libcsg/CMakeFiles/votca_csg.dir/build'. @@ -26701,1556 +26737,1556 @@ make -f xtp/src/libxtp/CMakeFiles/votca_xtp.dir/build.make xtp/src/libxtp/CMakeFiles/votca_xtp.dir/depend make -f csg/src/tools/CMakeFiles/csg_reupdate.dir/build.make csg/src/tools/CMakeFiles/csg_reupdate.dir/depend make -f csg/src/tools/CMakeFiles/csg_map.dir/build.make csg/src/tools/CMakeFiles/csg_map.dir/depend -make -f csg/src/tools/CMakeFiles/csg_dump.dir/build.make csg/src/tools/CMakeFiles/csg_dump.dir/depend make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/CMakeFiles/csg_reupdate.dir/DependInfo.cmake --color= -make -f csg/src/tools/CMakeFiles/csg_property.dir/build.make csg/src/tools/CMakeFiles/csg_property.dir/depend +make -f csg/src/tools/CMakeFiles/csg_dump.dir/build.make csg/src/tools/CMakeFiles/csg_dump.dir/depend make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/CMakeFiles/csg_map.dir/DependInfo.cmake --color= +make -f csg/src/tools/CMakeFiles/csg_property.dir/build.make csg/src/tools/CMakeFiles/csg_property.dir/depend +make -f csg/src/tools/CMakeFiles/csg_resample.dir/build.make csg/src/tools/CMakeFiles/csg_resample.dir/depend make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/CMakeFiles/csg_property.dir/DependInfo.cmake --color= cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/CMakeFiles/csg_dump.dir/DependInfo.cmake --color= -make -f csg/src/tools/CMakeFiles/csg_resample.dir/build.make csg/src/tools/CMakeFiles/csg_resample.dir/depend make -f csg/src/tools/CMakeFiles/csg_stat.dir/build.make csg/src/tools/CMakeFiles/csg_stat.dir/depend +make -f csg/src/tools/CMakeFiles/csg_fmatch.dir/build.make csg/src/tools/CMakeFiles/csg_fmatch.dir/depend make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/CMakeFiles/csg_property.dir/DependInfo.cmake --color= -make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f csg/src/tools/CMakeFiles/csg_map.dir/build.make csg/src/tools/CMakeFiles/csg_map.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/CMakeFiles/csg_stat.dir/DependInfo.cmake --color= cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/CMakeFiles/csg_resample.dir/DependInfo.cmake --color= make -f csg/src/tools/CMakeFiles/csg_reupdate.dir/build.make csg/src/tools/CMakeFiles/csg_reupdate.dir/build +make -f csg/src/tools/CMakeFiles/csg_gmxtopol.dir/build.make csg/src/tools/CMakeFiles/csg_gmxtopol.dir/depend make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/CMakeFiles/csg_stat.dir/DependInfo.cmake --color= -make -f csg/src/tools/CMakeFiles/csg_fmatch.dir/build.make csg/src/tools/CMakeFiles/csg_fmatch.dir/depend make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'csg/src/tools/CMakeFiles/csg_reupdate.dir/build'. +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/CMakeFiles/csg_fmatch.dir/DependInfo.cmake --color= +make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f csg/src/tools/CMakeFiles/csg_map.dir/build.make csg/src/tools/CMakeFiles/csg_map.dir/build make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make -f csg/src/tools/CMakeFiles/csg_property.dir/build.make csg/src/tools/CMakeFiles/csg_property.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'csg/src/tools/CMakeFiles/csg_map.dir/build'. +make[3]: Nothing to be done for 'csg/src/tools/CMakeFiles/csg_reupdate.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/CMakeFiles/csg_fmatch.dir/DependInfo.cmake --color= +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/CMakeFiles/csg_gmxtopol.dir/DependInfo.cmake --color= make -f csg/src/tools/CMakeFiles/csg_dump.dir/build.make csg/src/tools/CMakeFiles/csg_dump.dir/build -make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f csg/src/tools/CMakeFiles/csg_resample.dir/build.make csg/src/tools/CMakeFiles/csg_resample.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'csg/src/tools/CMakeFiles/csg_property.dir/build'. +make[3]: Nothing to be done for 'csg/src/tools/CMakeFiles/csg_map.dir/build'. +make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make -f csg/src/tools/CMakeFiles/csg_stat.dir/build.make csg/src/tools/CMakeFiles/csg_stat.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make[3]: Nothing to be done for 'csg/src/tools/CMakeFiles/csg_property.dir/build'. +make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f csg/src/tools/CMakeFiles/csg_resample.dir/build.make csg/src/tools/CMakeFiles/csg_resample.dir/build +make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'csg/src/tools/CMakeFiles/csg_dump.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f csg/src/tools/CMakeFiles/csg_fmatch.dir/build.make csg/src/tools/CMakeFiles/csg_fmatch.dir/build +make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'csg/src/tools/CMakeFiles/csg_resample.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f csg/src/tools/CMakeFiles/csg_fmatch.dir/build.make csg/src/tools/CMakeFiles/csg_fmatch.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'csg/src/tools/CMakeFiles/csg_stat.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 30%] Built target csg_reupdate -[ 30%] Built target csg_map make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'csg/src/tools/CMakeFiles/csg_fmatch.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f csg/src/tools/CMakeFiles/csg_gmxtopol.dir/build.make csg/src/tools/CMakeFiles/csg_gmxtopol.dir/build +[ 30%] Built target csg_reupdate +[ 30%] Built target csg_map [ 30%] Built target csg_property +make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make[3]: Nothing to be done for 'csg/src/tools/CMakeFiles/csg_gmxtopol.dir/build'. +make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' [ 30%] Built target csg_dump -make -f csg/src/tools/CMakeFiles/csg_gmxtopol.dir/build.make csg/src/tools/CMakeFiles/csg_gmxtopol.dir/depend -[ 31%] Built target csg_resample +[ 31%] Built target csg_stat +[ 32%] Built target csg_resample make -f csg/src/tools/CMakeFiles/csg_dlptopol.dir/build.make csg/src/tools/CMakeFiles/csg_dlptopol.dir/depend +[ 34%] Built target csg_fmatch make -f csg/src/tools/CMakeFiles/csg_density.dir/build.make csg/src/tools/CMakeFiles/csg_density.dir/depend -[ 32%] Built target csg_stat +[ 34%] Built target csg_gmxtopol make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/CMakeFiles/csg_dlptopol.dir/DependInfo.cmake --color= make -f csg/src/tools/CMakeFiles/csg_imc_solve.dir/build.make csg/src/tools/CMakeFiles/csg_imc_solve.dir/depend -make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make -f csg/src/csg_boltzmann/CMakeFiles/votca_csg_boltzmann.dir/build.make csg/src/csg_boltzmann/CMakeFiles/votca_csg_boltzmann.dir/depend -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/CMakeFiles/csg_gmxtopol.dir/DependInfo.cmake --color= -make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/CMakeFiles/csg_density.dir/DependInfo.cmake --color= -[ 34%] Built target csg_fmatch make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/CMakeFiles/csg_imc_solve.dir/DependInfo.cmake --color= make -f csg/src/csgapps/CMakeFiles/fluctuations.dir/build.make csg/src/csgapps/CMakeFiles/fluctuations.dir/depend +make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/CMakeFiles/csg_density.dir/DependInfo.cmake --color= make -f csg/src/csgapps/CMakeFiles/orientcorr.dir/build.make csg/src/csgapps/CMakeFiles/orientcorr.dir/depend make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/csgapps /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps/CMakeFiles/fluctuations.dir/DependInfo.cmake --color= -make -f csg/src/csgapps/CMakeFiles/part_dist.dir/build.make csg/src/csgapps/CMakeFiles/part_dist.dir/depend -make -f csg/src/csgapps/CMakeFiles/partial_rdf.dir/build.make csg/src/csgapps/CMakeFiles/partial_rdf.dir/depend +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/csg_boltzmann /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csg_boltzmann /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csg_boltzmann/CMakeFiles/votca_csg_boltzmann.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/csgapps /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps/CMakeFiles/part_dist.dir/DependInfo.cmake --color= +make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f csg/src/tools/CMakeFiles/csg_imc_solve.dir/build.make csg/src/tools/CMakeFiles/csg_imc_solve.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f csg/src/tools/CMakeFiles/csg_density.dir/build.make csg/src/tools/CMakeFiles/csg_density.dir/build -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/csg_boltzmann /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csg_boltzmann /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csg_boltzmann/CMakeFiles/votca_csg_boltzmann.dir/DependInfo.cmake --color= -make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f csg/src/csgapps/CMakeFiles/radii.dir/build.make csg/src/csgapps/CMakeFiles/radii.dir/depend +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/csgapps /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps/CMakeFiles/fluctuations.dir/DependInfo.cmake --color= cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/csgapps /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps/CMakeFiles/orientcorr.dir/DependInfo.cmake --color= -make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/csgapps /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps/CMakeFiles/partial_rdf.dir/DependInfo.cmake --color= +make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make -f csg/src/tools/CMakeFiles/csg_dlptopol.dir/build.make csg/src/tools/CMakeFiles/csg_dlptopol.dir/build +make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f csg/src/tools/CMakeFiles/csg_density.dir/build.make csg/src/tools/CMakeFiles/csg_density.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/csgapps /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps/CMakeFiles/radii.dir/DependInfo.cmake --color= +make -f csg/src/csgapps/CMakeFiles/orientcorr.dir/build.make csg/src/csgapps/CMakeFiles/orientcorr.dir/build +make[3]: Nothing to be done for 'csg/src/tools/CMakeFiles/csg_imc_solve.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f csg/src/tools/CMakeFiles/csg_imc_solve.dir/build.make csg/src/tools/CMakeFiles/csg_imc_solve.dir/build -make -f csg/src/tools/CMakeFiles/csg_gmxtopol.dir/build.make csg/src/tools/CMakeFiles/csg_gmxtopol.dir/build +make -f csg/src/csg_boltzmann/CMakeFiles/votca_csg_boltzmann.dir/build.make csg/src/csg_boltzmann/CMakeFiles/votca_csg_boltzmann.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'csg/src/tools/CMakeFiles/csg_density.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/libxtp /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp/CMakeFiles/votca_xtp.dir/DependInfo.cmake --color= +make[3]: Nothing to be done for 'csg/src/csgapps/CMakeFiles/orientcorr.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'csg/src/tools/CMakeFiles/csg_dlptopol.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make -f csg/src/csgapps/CMakeFiles/fluctuations.dir/build.make csg/src/csgapps/CMakeFiles/fluctuations.dir/build +make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make[3]: Nothing to be done for 'csg/src/csg_boltzmann/CMakeFiles/votca_csg_boltzmann.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 34%] Built target csg_imc_solve +make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/libxtp /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/libxtp/CMakeFiles/votca_xtp.dir/DependInfo.cmake --color= +make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make[3]: Nothing to be done for 'csg/src/csgapps/CMakeFiles/fluctuations.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 34%] Built target csg_dlptopol +[ 35%] Built target orientcorr +[ 35%] Built target csg_density +make -f csg/src/csgapps/CMakeFiles/part_dist.dir/build.make csg/src/csgapps/CMakeFiles/part_dist.dir/depend +[ 35%] Built target votca_csg_boltzmann +make -f csg/src/csgapps/CMakeFiles/partial_rdf.dir/build.make csg/src/csgapps/CMakeFiles/partial_rdf.dir/depend +[ 35%] Built target fluctuations +make -f csg/src/csgapps/CMakeFiles/radii.dir/build.make csg/src/csgapps/CMakeFiles/radii.dir/depend make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'csg/src/tools/CMakeFiles/csg_gmxtopol.dir/build'. +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/csgapps /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps/CMakeFiles/part_dist.dir/DependInfo.cmake --color= +make -f csg/src/csgapps/CMakeFiles/sphericalorder.dir/build.make csg/src/csgapps/CMakeFiles/sphericalorder.dir/depend make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f csg/src/csg_boltzmann/CMakeFiles/votca_csg_boltzmann.dir/build.make csg/src/csg_boltzmann/CMakeFiles/votca_csg_boltzmann.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'csg/src/tools/CMakeFiles/csg_imc_solve.dir/build'. +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/csgapps /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps/CMakeFiles/partial_rdf.dir/DependInfo.cmake --color= +make -f xtp/src/libxtp/CMakeFiles/votca_xtp.dir/build.make xtp/src/libxtp/CMakeFiles/votca_xtp.dir/build +make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/csgapps /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps/CMakeFiles/radii.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f csg/src/csgapps/CMakeFiles/orientcorr.dir/build.make csg/src/csgapps/CMakeFiles/orientcorr.dir/build +make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/csgapps /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps/CMakeFiles/sphericalorder.dir/DependInfo.cmake --color= make -f csg/src/csgapps/CMakeFiles/part_dist.dir/build.make csg/src/csgapps/CMakeFiles/part_dist.dir/build +make -f csg/src/csgapps/CMakeFiles/traj_force.dir/build.make csg/src/csgapps/CMakeFiles/traj_force.dir/depend +make -f csg/src/tests/CMakeFiles/unit_test_bead.dir/build.make csg/src/tests/CMakeFiles/unit_test_bead.dir/depend make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f csg/src/csgapps/CMakeFiles/partial_rdf.dir/build.make csg/src/csgapps/CMakeFiles/partial_rdf.dir/build -make -f csg/src/csgapps/CMakeFiles/radii.dir/build.make csg/src/csgapps/CMakeFiles/radii.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'csg/src/csgapps/CMakeFiles/orientcorr.dir/build'. +make[3]: Nothing to be done for 'csg/src/csgapps/CMakeFiles/part_dist.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 34%] Built target csg_density make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'csg/src/csgapps/CMakeFiles/fluctuations.dir/build'. -make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/csgapps /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps/CMakeFiles/traj_force.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'csg/src/csg_boltzmann/CMakeFiles/votca_csg_boltzmann.dir/build'. +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests/CMakeFiles/unit_test_bead.dir/DependInfo.cmake --color= +make -f csg/src/csgapps/CMakeFiles/radii.dir/build.make csg/src/csgapps/CMakeFiles/radii.dir/build make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'csg/src/csgapps/CMakeFiles/part_dist.dir/build'. +make -f csg/src/csgapps/CMakeFiles/partial_rdf.dir/build.make csg/src/csgapps/CMakeFiles/partial_rdf.dir/build +make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f csg/src/csgapps/CMakeFiles/sphericalorder.dir/build.make csg/src/csgapps/CMakeFiles/sphericalorder.dir/build make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +Dependencies file "csg/src/tests/CMakeFiles/unit_test_bead.dir/test_bead.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests/CMakeFiles/unit_test_bead.dir/compiler_depend.internal". make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'csg/src/csgapps/CMakeFiles/radii.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f csg/src/csgapps/CMakeFiles/traj_force.dir/build.make csg/src/csgapps/CMakeFiles/traj_force.dir/build +make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make[3]: Nothing to be done for 'csg/src/csgapps/CMakeFiles/sphericalorder.dir/build'. +make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'csg/src/csgapps/CMakeFiles/partial_rdf.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 34%] Built target csg_imc_solve -[ 34%] Built target csg_dlptopol -[ 34%] Built target csg_gmxtopol -[ 34%] Built target fluctuations -[ 34%] Built target votca_csg_boltzmann +Consolidate compiler generated dependencies of target unit_test_bead make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 35%] Built target orientcorr -make -f xtp/src/libxtp/CMakeFiles/votca_xtp.dir/build.make xtp/src/libxtp/CMakeFiles/votca_xtp.dir/build +make -f csg/src/tests/CMakeFiles/unit_test_bead.dir/build.make csg/src/tests/CMakeFiles/unit_test_bead.dir/build [ 35%] Built target part_dist -[ 35%] Built target partial_rdf -make -f csg/src/csgapps/CMakeFiles/sphericalorder.dir/build.make csg/src/csgapps/CMakeFiles/sphericalorder.dir/depend -make -f csg/src/csgapps/CMakeFiles/traj_force.dir/build.make csg/src/csgapps/CMakeFiles/traj_force.dir/depend -make -f csg/src/tests/CMakeFiles/unit_test_bead.dir/build.make csg/src/tests/CMakeFiles/unit_test_bead.dir/depend make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/csgapps /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps/CMakeFiles/sphericalorder.dir/DependInfo.cmake --color= -make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/csgapps /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps/CMakeFiles/traj_force.dir/DependInfo.cmake --color= +make[3]: Nothing to be done for 'csg/src/csgapps/CMakeFiles/traj_force.dir/build'. +make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' [ 36%] Built target radii -make -f csg/src/tests/CMakeFiles/unit_test_beadtriple.dir/build.make csg/src/tests/CMakeFiles/unit_test_beadtriple.dir/depend make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests/CMakeFiles/unit_test_bead.dir/DependInfo.cmake --color= +make[3]: Nothing to be done for 'csg/src/tests/CMakeFiles/unit_test_bead.dir/build'. +make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 36%] Built target partial_rdf +make -f csg/src/tests/CMakeFiles/unit_test_beadtriple.dir/build.make csg/src/tests/CMakeFiles/unit_test_beadtriple.dir/depend make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests/CMakeFiles/unit_test_beadtriple.dir/DependInfo.cmake --color= +[ 36%] Built target sphericalorder make -f csg/src/tests/CMakeFiles/unit_test_basebead.dir/build.make csg/src/tests/CMakeFiles/unit_test_basebead.dir/depend -make -f csg/src/tests/CMakeFiles/unit_test_beadmotif_algorithms.dir/build.make csg/src/tests/CMakeFiles/unit_test_beadmotif_algorithms.dir/depend +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests/CMakeFiles/unit_test_beadtriple.dir/DependInfo.cmake --color= +[ 36%] Built target traj_force make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests/CMakeFiles/unit_test_basebead.dir/DependInfo.cmake --color= -make -f csg/src/tests/CMakeFiles/unit_test_beadmotif_base.dir/build.make csg/src/tests/CMakeFiles/unit_test_beadmotif_base.dir/depend +make -f csg/src/tests/CMakeFiles/unit_test_beadmotif_algorithms.dir/build.make csg/src/tests/CMakeFiles/unit_test_beadmotif_algorithms.dir/depend +[ 38%] Built target unit_test_bead make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f csg/src/tests/CMakeFiles/unit_test_beadmotif_base.dir/build.make csg/src/tests/CMakeFiles/unit_test_beadmotif_base.dir/depend cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests/CMakeFiles/unit_test_beadmotif_algorithms.dir/DependInfo.cmake --color= -make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -Dependencies file "csg/src/tests/CMakeFiles/unit_test_bead.dir/test_bead.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests/CMakeFiles/unit_test_bead.dir/compiler_depend.internal". make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f csg/src/tests/CMakeFiles/unit_test_beadmotif_connector.dir/build.make csg/src/tests/CMakeFiles/unit_test_beadmotif_connector.dir/depend cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests/CMakeFiles/unit_test_beadmotif_base.dir/DependInfo.cmake --color= -make -f csg/src/csgapps/CMakeFiles/traj_force.dir/build.make csg/src/csgapps/CMakeFiles/traj_force.dir/build -Consolidate compiler generated dependencies of target unit_test_bead -make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f csg/src/tests/CMakeFiles/unit_test_bead.dir/build.make csg/src/tests/CMakeFiles/unit_test_bead.dir/build -make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -Dependencies file "csg/src/tests/CMakeFiles/unit_test_beadmotif_algorithms.dir/test_beadmotif_algorithms.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests/CMakeFiles/unit_test_beadmotif_algorithms.dir/compiler_depend.internal". -make -f csg/src/csgapps/CMakeFiles/sphericalorder.dir/build.make csg/src/csgapps/CMakeFiles/sphericalorder.dir/build +make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f csg/src/tests/CMakeFiles/unit_test_beadstructure_base.dir/build.make csg/src/tests/CMakeFiles/unit_test_beadstructure_base.dir/depend Dependencies file "csg/src/tests/CMakeFiles/unit_test_beadtriple.dir/test_beadtriple.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests/CMakeFiles/unit_test_beadtriple.dir/compiler_depend.internal". +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests/CMakeFiles/unit_test_beadmotif_connector.dir/DependInfo.cmake --color= +make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests/CMakeFiles/unit_test_beadstructure_base.dir/DependInfo.cmake --color= Dependencies file "csg/src/tests/CMakeFiles/unit_test_basebead.dir/test_basebead.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests/CMakeFiles/unit_test_basebead.dir/compiler_depend.internal". -make -f csg/src/tests/CMakeFiles/unit_test_beadmotif_connector.dir/build.make csg/src/tests/CMakeFiles/unit_test_beadmotif_connector.dir/depend -Dependencies file "csg/src/tests/CMakeFiles/unit_test_beadmotif_base.dir/test_beadmotif_base.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests/CMakeFiles/unit_test_beadmotif_base.dir/compiler_depend.internal". -Consolidate compiler generated dependencies of target unit_test_beadmotif_algorithms +make -f csg/src/tests/CMakeFiles/unit_test_beadstructure_algorithms.dir/build.make csg/src/tests/CMakeFiles/unit_test_beadstructure_algorithms.dir/depend make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'csg/src/tests/CMakeFiles/unit_test_bead.dir/build'. -make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f csg/src/tests/CMakeFiles/unit_test_bondedstatistics.dir/build.make csg/src/tests/CMakeFiles/unit_test_bondedstatistics.dir/depend +Consolidate compiler generated dependencies of target unit_test_beadtriple +Dependencies file "csg/src/tests/CMakeFiles/unit_test_beadmotif_algorithms.dir/test_beadmotif_algorithms.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests/CMakeFiles/unit_test_beadmotif_algorithms.dir/compiler_depend.internal". make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests/CMakeFiles/unit_test_beadstructure_algorithms.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests/CMakeFiles/unit_test_beadmotif_connector.dir/DependInfo.cmake --color= -make -f csg/src/tests/CMakeFiles/unit_test_beadmotif_algorithms.dir/build.make csg/src/tests/CMakeFiles/unit_test_beadmotif_algorithms.dir/build -make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'csg/src/csgapps/CMakeFiles/traj_force.dir/build'. +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests/CMakeFiles/unit_test_bondedstatistics.dir/DependInfo.cmake --color= +make -f csg/src/tests/CMakeFiles/unit_test_beadtriple.dir/build.make csg/src/tests/CMakeFiles/unit_test_beadtriple.dir/build +Consolidate compiler generated dependencies of target unit_test_basebead make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +Dependencies file "csg/src/tests/CMakeFiles/unit_test_beadmotif_base.dir/test_beadmotif_base.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests/CMakeFiles/unit_test_beadmotif_base.dir/compiler_depend.internal". +make -f csg/src/tests/CMakeFiles/unit_test_basebead.dir/build.make csg/src/tests/CMakeFiles/unit_test_basebead.dir/build +Dependencies file "csg/src/tests/CMakeFiles/unit_test_beadmotif_connector.dir/test_beadmotif_connector.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests/CMakeFiles/unit_test_beadmotif_connector.dir/compiler_depend.internal". +make -f csg/src/tests/CMakeFiles/unit_test_csg_topology.dir/build.make csg/src/tests/CMakeFiles/unit_test_csg_topology.dir/depend +Dependencies file "csg/src/tests/CMakeFiles/unit_test_beadstructure_base.dir/test_beadstructure_base.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests/CMakeFiles/unit_test_beadstructure_base.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target unit_test_beadmotif_base -Consolidate compiler generated dependencies of target unit_test_beadtriple +make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make[3]: Nothing to be done for 'csg/src/tests/CMakeFiles/unit_test_beadtriple.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -Consolidate compiler generated dependencies of target unit_test_basebead -make -f csg/src/tests/CMakeFiles/unit_test_beadmotif_base.dir/build.make csg/src/tests/CMakeFiles/unit_test_beadmotif_base.dir/build +Dependencies file "csg/src/tests/CMakeFiles/unit_test_bondedstatistics.dir/test_bondedstatistics.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests/CMakeFiles/unit_test_bondedstatistics.dir/compiler_depend.internal". make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +Consolidate compiler generated dependencies of target unit_test_beadmotif_connector make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'csg/src/tests/CMakeFiles/unit_test_beadmotif_algorithms.dir/build'. +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests/CMakeFiles/unit_test_csg_topology.dir/DependInfo.cmake --color= +Consolidate compiler generated dependencies of target unit_test_beadmotif_algorithms make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f csg/src/tests/CMakeFiles/unit_test_beadmotif_base.dir/build.make csg/src/tests/CMakeFiles/unit_test_beadmotif_base.dir/build +Consolidate compiler generated dependencies of target unit_test_beadstructure_base make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'csg/src/csgapps/CMakeFiles/sphericalorder.dir/build'. +make[3]: Nothing to be done for 'csg/src/tests/CMakeFiles/unit_test_basebead.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -Dependencies file "csg/src/tests/CMakeFiles/unit_test_beadmotif_connector.dir/test_beadmotif_connector.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests/CMakeFiles/unit_test_beadmotif_connector.dir/compiler_depend.internal". -make -f csg/src/tests/CMakeFiles/unit_test_beadtriple.dir/build.make csg/src/tests/CMakeFiles/unit_test_beadtriple.dir/build -[ 38%] Built target unit_test_bead -[ 38%] Built target traj_force -make -f csg/src/tests/CMakeFiles/unit_test_basebead.dir/build.make csg/src/tests/CMakeFiles/unit_test_basebead.dir/build -make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'csg/src/tests/CMakeFiles/unit_test_beadmotif_base.dir/build'. +make -f csg/src/tests/CMakeFiles/unit_test_beadmotif_algorithms.dir/build.make csg/src/tests/CMakeFiles/unit_test_beadmotif_algorithms.dir/build make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -Consolidate compiler generated dependencies of target unit_test_beadmotif_connector +make -f csg/src/tests/CMakeFiles/unit_test_beadmotif_connector.dir/build.make csg/src/tests/CMakeFiles/unit_test_beadmotif_connector.dir/build +Dependencies file "csg/src/tests/CMakeFiles/unit_test_beadstructure_algorithms.dir/test_beadstructure_algorithms.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests/CMakeFiles/unit_test_beadstructure_algorithms.dir/compiler_depend.internal". +Consolidate compiler generated dependencies of target unit_test_bondedstatistics make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'csg/src/tests/CMakeFiles/unit_test_beadtriple.dir/build'. +make[3]: Nothing to be done for 'csg/src/tests/CMakeFiles/unit_test_beadmotif_algorithms.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f csg/src/tests/CMakeFiles/unit_test_beadmotif_connector.dir/build.make csg/src/tests/CMakeFiles/unit_test_beadmotif_connector.dir/build +make -f csg/src/tests/CMakeFiles/unit_test_beadstructure_base.dir/build.make csg/src/tests/CMakeFiles/unit_test_beadstructure_base.dir/build +Consolidate compiler generated dependencies of target unit_test_beadstructure_algorithms make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'csg/src/tests/CMakeFiles/unit_test_basebead.dir/build'. +make[3]: Nothing to be done for 'csg/src/tests/CMakeFiles/unit_test_beadmotif_base.dir/build'. +make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +Dependencies file "csg/src/tests/CMakeFiles/unit_test_csg_topology.dir/test_csg_topology.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests/CMakeFiles/unit_test_csg_topology.dir/compiler_depend.internal". +make -f csg/src/tests/CMakeFiles/unit_test_beadstructure_algorithms.dir/build.make csg/src/tests/CMakeFiles/unit_test_beadstructure_algorithms.dir/build +Consolidate compiler generated dependencies of target unit_test_csg_topology +make -f csg/src/tests/CMakeFiles/unit_test_bondedstatistics.dir/build.make csg/src/tests/CMakeFiles/unit_test_bondedstatistics.dir/build make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 38%] Built target sphericalorder make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'csg/src/tests/CMakeFiles/unit_test_beadmotif_connector.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 38%] Built target unit_test_beadmotif_algorithms -[ 38%] Built target unit_test_beadtriple -make -f csg/src/tests/CMakeFiles/unit_test_beadstructure_base.dir/build.make csg/src/tests/CMakeFiles/unit_test_beadstructure_base.dir/depend -[ 38%] Built target unit_test_basebead -[ 38%] Built target unit_test_beadmotif_base -make -f csg/src/tests/CMakeFiles/unit_test_beadstructure_algorithms.dir/build.make csg/src/tests/CMakeFiles/unit_test_beadstructure_algorithms.dir/depend make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests/CMakeFiles/unit_test_beadstructure_base.dir/DependInfo.cmake --color= +make[3]: Nothing to be done for 'csg/src/tests/CMakeFiles/unit_test_beadstructure_base.dir/build'. +make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests/CMakeFiles/unit_test_beadstructure_algorithms.dir/DependInfo.cmake --color= -[ 38%] Built target unit_test_beadmotif_connector -make -f csg/src/tests/CMakeFiles/unit_test_bondedstatistics.dir/build.make csg/src/tests/CMakeFiles/unit_test_bondedstatistics.dir/depend +make[3]: Nothing to be done for 'csg/src/tests/CMakeFiles/unit_test_beadstructure_algorithms.dir/build'. +make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests/CMakeFiles/unit_test_bondedstatistics.dir/DependInfo.cmake --color= -make -f csg/src/tests/CMakeFiles/unit_test_csg_topology.dir/build.make csg/src/tests/CMakeFiles/unit_test_csg_topology.dir/depend +make[3]: Nothing to be done for 'xtp/src/libxtp/CMakeFiles/votca_xtp.dir/build'. +make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 38%] Built target unit_test_beadtriple +make[3]: Nothing to be done for 'csg/src/tests/CMakeFiles/unit_test_bondedstatistics.dir/build'. +make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f csg/src/tests/CMakeFiles/unit_test_csg_topology.dir/build.make csg/src/tests/CMakeFiles/unit_test_csg_topology.dir/build +[ 38%] Built target unit_test_basebead make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make[3]: Nothing to be done for 'csg/src/tests/CMakeFiles/unit_test_csg_topology.dir/build'. +make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 61%] Built target votca_xtp +[ 61%] Built target unit_test_beadmotif_base +[ 61%] Built target unit_test_beadmotif_algorithms +[ 61%] Built target unit_test_beadmotif_connector +[ 61%] Built target unit_test_beadstructure_base make -f csg/src/tests/CMakeFiles/unit_test_interaction.dir/build.make csg/src/tests/CMakeFiles/unit_test_interaction.dir/depend -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests/CMakeFiles/unit_test_csg_topology.dir/DependInfo.cmake --color= -Dependencies file "csg/src/tests/CMakeFiles/unit_test_beadstructure_base.dir/test_beadstructure_base.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests/CMakeFiles/unit_test_beadstructure_base.dir/compiler_depend.internal". +[ 63%] Built target unit_test_beadstructure_algorithms +[ 64%] Built target unit_test_bondedstatistics make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests/CMakeFiles/unit_test_interaction.dir/DependInfo.cmake --color= -Consolidate compiler generated dependencies of target unit_test_beadstructure_base make -f csg/src/tests/CMakeFiles/unit_test_lammpsdatareader.dir/build.make csg/src/tests/CMakeFiles/unit_test_lammpsdatareader.dir/depend -make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -Dependencies file "csg/src/tests/CMakeFiles/unit_test_beadstructure_algorithms.dir/test_beadstructure_algorithms.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests/CMakeFiles/unit_test_beadstructure_algorithms.dir/compiler_depend.internal". -make -f csg/src/tests/CMakeFiles/unit_test_beadstructure_base.dir/build.make csg/src/tests/CMakeFiles/unit_test_beadstructure_base.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests/CMakeFiles/unit_test_lammpsdatareader.dir/DependInfo.cmake --color= make -f csg/src/tests/CMakeFiles/unit_test_lammpsdumpreaderwriter.dir/build.make csg/src/tests/CMakeFiles/unit_test_lammpsdumpreaderwriter.dir/depend -Dependencies file "csg/src/tests/CMakeFiles/unit_test_csg_topology.dir/test_csg_topology.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests/CMakeFiles/unit_test_csg_topology.dir/compiler_depend.internal". -Consolidate compiler generated dependencies of target unit_test_beadstructure_algorithms make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests/CMakeFiles/unit_test_lammpsdumpreaderwriter.dir/DependInfo.cmake --color= make -f csg/src/tests/CMakeFiles/unit_test_nblist_3body.dir/build.make csg/src/tests/CMakeFiles/unit_test_nblist_3body.dir/depend -Dependencies file "csg/src/tests/CMakeFiles/unit_test_bondedstatistics.dir/test_bondedstatistics.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests/CMakeFiles/unit_test_bondedstatistics.dir/compiler_depend.internal". -make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -Consolidate compiler generated dependencies of target unit_test_csg_topology +[ 64%] Built target unit_test_csg_topology +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests/CMakeFiles/unit_test_lammpsdumpreaderwriter.dir/DependInfo.cmake --color= +Dependencies file "csg/src/tests/CMakeFiles/unit_test_lammpsdatareader.dir/test_lammpsdatareader.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests/CMakeFiles/unit_test_lammpsdatareader.dir/compiler_depend.internal". make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f csg/src/tests/CMakeFiles/unit_test_nblistgrid_3body.dir/build.make csg/src/tests/CMakeFiles/unit_test_nblistgrid_3body.dir/depend cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests/CMakeFiles/unit_test_nblist_3body.dir/DependInfo.cmake --color= -make[3]: Nothing to be done for 'csg/src/tests/CMakeFiles/unit_test_beadstructure_base.dir/build'. -make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f csg/src/tests/CMakeFiles/unit_test_beadstructure_algorithms.dir/build.make csg/src/tests/CMakeFiles/unit_test_beadstructure_algorithms.dir/build +Consolidate compiler generated dependencies of target unit_test_lammpsdatareader make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' Dependencies file "csg/src/tests/CMakeFiles/unit_test_interaction.dir/test_interaction.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests/CMakeFiles/unit_test_interaction.dir/compiler_depend.internal". -Dependencies file "csg/src/tests/CMakeFiles/unit_test_lammpsdatareader.dir/test_lammpsdatareader.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests/CMakeFiles/unit_test_lammpsdatareader.dir/compiler_depend.internal". -make -f csg/src/tests/CMakeFiles/unit_test_csg_topology.dir/build.make csg/src/tests/CMakeFiles/unit_test_csg_topology.dir/build -Consolidate compiler generated dependencies of target unit_test_bondedstatistics +make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests/CMakeFiles/unit_test_nblistgrid_3body.dir/DependInfo.cmake --color= +make -f csg/src/tests/CMakeFiles/unit_test_lammpsdatareader.dir/build.make csg/src/tests/CMakeFiles/unit_test_lammpsdatareader.dir/build +Dependencies file "csg/src/tests/CMakeFiles/unit_test_nblist_3body.dir/test_nblist_3body.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests/CMakeFiles/unit_test_nblist_3body.dir/compiler_depend.internal". +make -f csg/src/tests/CMakeFiles/unit_test_boundarycondition.dir/build.make csg/src/tests/CMakeFiles/unit_test_boundarycondition.dir/depend +Dependencies file "csg/src/tests/CMakeFiles/unit_test_lammpsdumpreaderwriter.dir/test_lammpsdumpreaderwriter.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests/CMakeFiles/unit_test_lammpsdumpreaderwriter.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target unit_test_interaction make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -Consolidate compiler generated dependencies of target unit_test_lammpsdatareader make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'csg/src/tests/CMakeFiles/unit_test_beadstructure_algorithms.dir/build'. -make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f csg/src/tests/CMakeFiles/unit_test_bondedstatistics.dir/build.make csg/src/tests/CMakeFiles/unit_test_bondedstatistics.dir/build +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests/CMakeFiles/unit_test_boundarycondition.dir/DependInfo.cmake --color= make -f csg/src/tests/CMakeFiles/unit_test_interaction.dir/build.make csg/src/tests/CMakeFiles/unit_test_interaction.dir/build -make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'xtp/src/libxtp/CMakeFiles/votca_xtp.dir/build'. -make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -Dependencies file "csg/src/tests/CMakeFiles/unit_test_lammpsdumpreaderwriter.dir/test_lammpsdumpreaderwriter.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests/CMakeFiles/unit_test_lammpsdumpreaderwriter.dir/compiler_depend.internal". -make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'csg/src/tests/CMakeFiles/unit_test_csg_topology.dir/build'. +Consolidate compiler generated dependencies of target unit_test_nblist_3body make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 38%] Built target unit_test_beadstructure_base -Dependencies file "csg/src/tests/CMakeFiles/unit_test_nblist_3body.dir/test_nblist_3body.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests/CMakeFiles/unit_test_nblist_3body.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target unit_test_lammpsdumpreaderwriter -make -f csg/src/tests/CMakeFiles/unit_test_lammpsdatareader.dir/build.make csg/src/tests/CMakeFiles/unit_test_lammpsdatareader.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'csg/src/tests/CMakeFiles/unit_test_bondedstatistics.dir/build'. +make[3]: Nothing to be done for 'csg/src/tests/CMakeFiles/unit_test_lammpsdatareader.dir/build'. +make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f csg/src/tests/CMakeFiles/unit_test_nblist_3body.dir/build.make csg/src/tests/CMakeFiles/unit_test_nblist_3body.dir/build +Dependencies file "csg/src/tests/CMakeFiles/unit_test_nblistgrid_3body.dir/test_nblistgrid_3body.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests/CMakeFiles/unit_test_nblistgrid_3body.dir/compiler_depend.internal". +make -f csg/src/tests/CMakeFiles/unit_test_lammpsdumpreaderwriter.dir/build.make csg/src/tests/CMakeFiles/unit_test_lammpsdumpreaderwriter.dir/build +Dependencies file "csg/src/tests/CMakeFiles/unit_test_boundarycondition.dir/test_boundarycondition.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests/CMakeFiles/unit_test_boundarycondition.dir/compiler_depend.internal". make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'csg/src/tests/CMakeFiles/unit_test_interaction.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +Consolidate compiler generated dependencies of target unit_test_boundarycondition make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f csg/src/tests/CMakeFiles/unit_test_lammpsdumpreaderwriter.dir/build.make csg/src/tests/CMakeFiles/unit_test_lammpsdumpreaderwriter.dir/build -Consolidate compiler generated dependencies of target unit_test_nblist_3body +Consolidate compiler generated dependencies of target unit_test_nblistgrid_3body make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f csg/src/tests/CMakeFiles/unit_test_nblist_3body.dir/build.make csg/src/tests/CMakeFiles/unit_test_nblist_3body.dir/build +make -f csg/src/tests/CMakeFiles/unit_test_nblistgrid_3body.dir/build.make csg/src/tests/CMakeFiles/unit_test_nblistgrid_3body.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'csg/src/tests/CMakeFiles/unit_test_lammpsdatareader.dir/build'. +make[3]: Nothing to be done for 'csg/src/tests/CMakeFiles/unit_test_nblist_3body.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 61%] Built target votca_xtp +make -f csg/src/tests/CMakeFiles/unit_test_boundarycondition.dir/build.make csg/src/tests/CMakeFiles/unit_test_boundarycondition.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'csg/src/tests/CMakeFiles/unit_test_lammpsdumpreaderwriter.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'csg/src/tests/CMakeFiles/unit_test_nblist_3body.dir/build'. -make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 63%] Built target unit_test_beadstructure_algorithms -[ 63%] Built target unit_test_csg_topology -[ 64%] Built target unit_test_bondedstatistics -[ 64%] Built target unit_test_interaction -make -f csg/src/tests/CMakeFiles/unit_test_nblistgrid_3body.dir/build.make csg/src/tests/CMakeFiles/unit_test_nblistgrid_3body.dir/depend [ 65%] Built target unit_test_lammpsdatareader -make -f csg/src/tests/CMakeFiles/unit_test_boundarycondition.dir/build.make csg/src/tests/CMakeFiles/unit_test_boundarycondition.dir/depend make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make[3]: Nothing to be done for 'csg/src/tests/CMakeFiles/unit_test_nblistgrid_3body.dir/build'. +make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests/CMakeFiles/unit_test_nblistgrid_3body.dir/DependInfo.cmake --color= -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests/CMakeFiles/unit_test_boundarycondition.dir/DependInfo.cmake --color= -make -f csg/src/tests/CMakeFiles/unit_test_pdbreader.dir/build.make csg/src/tests/CMakeFiles/unit_test_pdbreader.dir/depend +make[3]: Nothing to be done for 'csg/src/tests/CMakeFiles/unit_test_boundarycondition.dir/build'. +make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 65%] Built target unit_test_interaction +[ 65%] Built target unit_test_nblist_3body [ 65%] Built target unit_test_lammpsdumpreaderwriter +make -f csg/src/tests/CMakeFiles/unit_test_pdbreader.dir/build.make csg/src/tests/CMakeFiles/unit_test_pdbreader.dir/depend +[ 67%] Built target unit_test_nblistgrid_3body make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests/CMakeFiles/unit_test_pdbreader.dir/DependInfo.cmake --color= make -f csg/src/tests/CMakeFiles/unit_test_tabulatedpotential.dir/build.make csg/src/tests/CMakeFiles/unit_test_tabulatedpotential.dir/depend -make -f csg/src/tests/CMakeFiles/unit_test_triplelist.dir/build.make csg/src/tests/CMakeFiles/unit_test_triplelist.dir/depend +[ 67%] Built target unit_test_boundarycondition make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests/CMakeFiles/unit_test_tabulatedpotential.dir/DependInfo.cmake --color= -make -f csg/share/template/CMakeFiles/template_serial.dir/build.make csg/share/template/CMakeFiles/template_serial.dir/depend +make -f csg/src/tests/CMakeFiles/unit_test_triplelist.dir/build.make csg/src/tests/CMakeFiles/unit_test_triplelist.dir/depend make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests/CMakeFiles/unit_test_triplelist.dir/DependInfo.cmake --color= +make -f csg/share/template/CMakeFiles/template_serial.dir/build.make csg/share/template/CMakeFiles/template_serial.dir/depend +Dependencies file "csg/src/tests/CMakeFiles/unit_test_tabulatedpotential.dir/test_tabulatedpotential.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests/CMakeFiles/unit_test_tabulatedpotential.dir/compiler_depend.internal". +Consolidate compiler generated dependencies of target unit_test_tabulatedpotential make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/share/template /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/template /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/template/CMakeFiles/template_serial.dir/DependInfo.cmake --color= make -f csg/share/template/CMakeFiles/template_threaded.dir/build.make csg/share/template/CMakeFiles/template_threaded.dir/depend -[ 65%] Built target unit_test_nblist_3body +make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +Dependencies file "csg/src/tests/CMakeFiles/unit_test_pdbreader.dir/test_pdbreader.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests/CMakeFiles/unit_test_pdbreader.dir/compiler_depend.internal". make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/share/template /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/template /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/template/CMakeFiles/template_threaded.dir/DependInfo.cmake --color= +make -f csg/src/tests/CMakeFiles/unit_test_tabulatedpotential.dir/build.make csg/src/tests/CMakeFiles/unit_test_tabulatedpotential.dir/build +Dependencies file "csg/src/tests/CMakeFiles/unit_test_triplelist.dir/test_triplelist.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests/CMakeFiles/unit_test_triplelist.dir/compiler_depend.internal". make -f xtp/src/tests/CMakeFiles/unit_test_adiis.dir/build.make xtp/src/tests/CMakeFiles/unit_test_adiis.dir/depend Dependencies file "csg/share/template/CMakeFiles/template_serial.dir/template_serial.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/template/CMakeFiles/template_serial.dir/compiler_depend.internal". -Dependencies file "csg/src/tests/CMakeFiles/unit_test_boundarycondition.dir/test_boundarycondition.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests/CMakeFiles/unit_test_boundarycondition.dir/compiler_depend.internal". +Consolidate compiler generated dependencies of target unit_test_pdbreader make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -Dependencies file "csg/src/tests/CMakeFiles/unit_test_pdbreader.dir/test_pdbreader.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests/CMakeFiles/unit_test_pdbreader.dir/compiler_depend.internal". make -f xtp/src/tests/CMakeFiles/unit_test_aobasis.dir/build.make xtp/src/tests/CMakeFiles/unit_test_aobasis.dir/depend cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_adiis.dir/DependInfo.cmake --color= -Consolidate compiler generated dependencies of target unit_test_boundarycondition -Consolidate compiler generated dependencies of target template_serial -make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -Dependencies file "csg/src/tests/CMakeFiles/unit_test_nblistgrid_3body.dir/test_nblistgrid_3body.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests/CMakeFiles/unit_test_nblistgrid_3body.dir/compiler_depend.internal". make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_aobasis.dir/DependInfo.cmake --color= -make -f csg/src/tests/CMakeFiles/unit_test_boundarycondition.dir/build.make csg/src/tests/CMakeFiles/unit_test_boundarycondition.dir/build -make -f csg/share/template/CMakeFiles/template_serial.dir/build.make csg/share/template/CMakeFiles/template_serial.dir/build -Dependencies file "csg/src/tests/CMakeFiles/unit_test_tabulatedpotential.dir/test_tabulatedpotential.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests/CMakeFiles/unit_test_tabulatedpotential.dir/compiler_depend.internal". -Dependencies file "csg/src/tests/CMakeFiles/unit_test_triplelist.dir/test_triplelist.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests/CMakeFiles/unit_test_triplelist.dir/compiler_depend.internal". Dependencies file "csg/share/template/CMakeFiles/template_threaded.dir/template_threaded.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/template/CMakeFiles/template_threaded.dir/compiler_depend.internal". -Consolidate compiler generated dependencies of target unit_test_pdbreader -make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'csg/src/tests/CMakeFiles/unit_test_boundarycondition.dir/build'. -make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/src/tests/CMakeFiles/unit_test_aomatrix.dir/build.make xtp/src/tests/CMakeFiles/unit_test_aomatrix.dir/depend -make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -Consolidate compiler generated dependencies of target unit_test_nblistgrid_3body -Dependencies file "xtp/src/tests/CMakeFiles/unit_test_adiis.dir/test_adiis.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_adiis.dir/compiler_depend.internal". -make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_aomatrix.dir/DependInfo.cmake --color= make -f csg/src/tests/CMakeFiles/unit_test_pdbreader.dir/build.make csg/src/tests/CMakeFiles/unit_test_pdbreader.dir/build -Consolidate compiler generated dependencies of target unit_test_tabulatedpotential +Consolidate compiler generated dependencies of target template_serial +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_aobasis.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -Consolidate compiler generated dependencies of target unit_test_triplelist -Consolidate compiler generated dependencies of target template_threaded -make -f csg/src/tests/CMakeFiles/unit_test_nblistgrid_3body.dir/build.make csg/src/tests/CMakeFiles/unit_test_nblistgrid_3body.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'csg/share/template/CMakeFiles/template_serial.dir/build'. -make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make[3]: Nothing to be done for 'csg/src/tests/CMakeFiles/unit_test_tabulatedpotential.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -Consolidate compiler generated dependencies of target unit_test_adiis +Consolidate compiler generated dependencies of target unit_test_triplelist make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +Consolidate compiler generated dependencies of target template_threaded +make -f csg/src/tests/CMakeFiles/unit_test_triplelist.dir/build.make csg/src/tests/CMakeFiles/unit_test_triplelist.dir/build make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f csg/src/tests/CMakeFiles/unit_test_tabulatedpotential.dir/build.make csg/src/tests/CMakeFiles/unit_test_tabulatedpotential.dir/build +make -f csg/share/template/CMakeFiles/template_serial.dir/build.make csg/share/template/CMakeFiles/template_serial.dir/build Dependencies file "xtp/src/tests/CMakeFiles/unit_test_aobasis.dir/test_aobasis.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_aobasis.dir/compiler_depend.internal". -make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f csg/src/tests/CMakeFiles/unit_test_triplelist.dir/build.make csg/src/tests/CMakeFiles/unit_test_triplelist.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'csg/src/tests/CMakeFiles/unit_test_pdbreader.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -Dependencies file "xtp/src/tests/CMakeFiles/unit_test_aomatrix.dir/test_aomatrix.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_aomatrix.dir/compiler_depend.internal". -Consolidate compiler generated dependencies of target unit_test_aobasis +Dependencies file "xtp/src/tests/CMakeFiles/unit_test_adiis.dir/test_adiis.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_adiis.dir/compiler_depend.internal". make -f csg/share/template/CMakeFiles/template_threaded.dir/build.make csg/share/template/CMakeFiles/template_threaded.dir/build -make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'csg/src/tests/CMakeFiles/unit_test_nblistgrid_3body.dir/build'. +make[3]: Nothing to be done for 'csg/src/tests/CMakeFiles/unit_test_triplelist.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +Consolidate compiler generated dependencies of target unit_test_adiis make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'csg/src/tests/CMakeFiles/unit_test_tabulatedpotential.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/src/tests/CMakeFiles/unit_test_adiis.dir/build.make xtp/src/tests/CMakeFiles/unit_test_adiis.dir/build -Consolidate compiler generated dependencies of target unit_test_aomatrix -make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'csg/src/tests/CMakeFiles/unit_test_triplelist.dir/build'. +Consolidate compiler generated dependencies of target unit_test_aobasis +make[3]: Nothing to be done for 'csg/share/template/CMakeFiles/template_serial.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/src/tests/CMakeFiles/unit_test_aobasis.dir/build.make xtp/src/tests/CMakeFiles/unit_test_aobasis.dir/build make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f xtp/src/tests/CMakeFiles/unit_test_adiis.dir/build.make xtp/src/tests/CMakeFiles/unit_test_adiis.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f xtp/src/tests/CMakeFiles/unit_test_aobasis.dir/build.make xtp/src/tests/CMakeFiles/unit_test_aobasis.dir/build make[3]: Nothing to be done for 'csg/share/template/CMakeFiles/template_threaded.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 67%] Built target unit_test_tabulatedpotential make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_adiis.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/src/tests/CMakeFiles/unit_test_aomatrix.dir/build.make xtp/src/tests/CMakeFiles/unit_test_aomatrix.dir/build +[ 67%] Built target unit_test_pdbreader make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_aobasis.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 65%] Built target template_serial -[ 65%] Built target unit_test_boundarycondition -make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_aomatrix.dir/build'. -make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 65%] Built target unit_test_pdbreader -[ 67%] Built target unit_test_nblistgrid_3body [ 67%] Built target unit_test_triplelist -[ 67%] Built target unit_test_tabulatedpotential +[ 67%] Built target template_serial +make -f xtp/src/tests/CMakeFiles/unit_test_aomatrix.dir/build.make xtp/src/tests/CMakeFiles/unit_test_aomatrix.dir/depend +[ 67%] Built target unit_test_adiis [ 68%] Built target template_threaded +make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_aomatrix.dir/DependInfo.cmake --color= make -f xtp/src/tests/CMakeFiles/unit_test_aomatrix3d.dir/build.make xtp/src/tests/CMakeFiles/unit_test_aomatrix3d.dir/depend -make -f xtp/src/tests/CMakeFiles/unit_test_aotransform.dir/build.make xtp/src/tests/CMakeFiles/unit_test_aotransform.dir/depend +[ 68%] Built target unit_test_aobasis make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_aomatrix3d.dir/DependInfo.cmake --color= +make -f xtp/src/tests/CMakeFiles/unit_test_aotransform.dir/build.make xtp/src/tests/CMakeFiles/unit_test_aotransform.dir/depend +Dependencies file "xtp/src/tests/CMakeFiles/unit_test_aomatrix.dir/test_aomatrix.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_aomatrix.dir/compiler_depend.internal". make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make -f xtp/src/tests/CMakeFiles/unit_test_aopotential.dir/build.make xtp/src/tests/CMakeFiles/unit_test_aopotential.dir/depend cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_aotransform.dir/DependInfo.cmake --color= -make -f xtp/src/tests/CMakeFiles/unit_test_atom.dir/build.make xtp/src/tests/CMakeFiles/unit_test_atom.dir/depend +Consolidate compiler generated dependencies of target unit_test_aomatrix +make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_aopotential.dir/DependInfo.cmake --color= -make -f xtp/src/tests/CMakeFiles/unit_test_qmatom.dir/build.make xtp/src/tests/CMakeFiles/unit_test_qmatom.dir/depend -[ 68%] Built target unit_test_aobasis -[ 68%] Built target unit_test_adiis -make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_atom.dir/DependInfo.cmake --color= -make -f xtp/src/tests/CMakeFiles/unit_test_polarsegment.dir/build.make xtp/src/tests/CMakeFiles/unit_test_polarsegment.dir/depend -make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_qmatom.dir/DependInfo.cmake --color= -[ 69%] Built target unit_test_aomatrix +make -f xtp/src/tests/CMakeFiles/unit_test_aomatrix.dir/build.make xtp/src/tests/CMakeFiles/unit_test_aomatrix.dir/build Dependencies file "xtp/src/tests/CMakeFiles/unit_test_aomatrix3d.dir/test_aomatrix3d.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_aomatrix3d.dir/compiler_depend.internal". +make -f xtp/src/tests/CMakeFiles/unit_test_atom.dir/build.make xtp/src/tests/CMakeFiles/unit_test_atom.dir/depend make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_polarsegment.dir/DependInfo.cmake --color= -make -f xtp/src/tests/CMakeFiles/unit_test_qmmolecule.dir/build.make xtp/src/tests/CMakeFiles/unit_test_qmmolecule.dir/depend +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_atom.dir/DependInfo.cmake --color= +make -f xtp/src/tests/CMakeFiles/unit_test_qmatom.dir/build.make xtp/src/tests/CMakeFiles/unit_test_qmatom.dir/depend +Dependencies file "xtp/src/tests/CMakeFiles/unit_test_aotransform.dir/test_aotransform.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_aotransform.dir/compiler_depend.internal". Dependencies file "xtp/src/tests/CMakeFiles/unit_test_aopotential.dir/test_aopotential.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_aopotential.dir/compiler_depend.internal". -Dependencies file "xtp/src/tests/CMakeFiles/unit_test_atom.dir/test_atom.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_atom.dir/compiler_depend.internal". make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_qmmolecule.dir/DependInfo.cmake --color= -make -f xtp/src/tests/CMakeFiles/unit_test_basisset.dir/build.make xtp/src/tests/CMakeFiles/unit_test_basisset.dir/depend +make -f xtp/src/tests/CMakeFiles/unit_test_polarsegment.dir/build.make xtp/src/tests/CMakeFiles/unit_test_polarsegment.dir/depend +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_qmatom.dir/DependInfo.cmake --color= Consolidate compiler generated dependencies of target unit_test_aomatrix3d -make -f xtp/src/tests/CMakeFiles/unit_test_bseoperator_btda.dir/build.make xtp/src/tests/CMakeFiles/unit_test_bseoperator_btda.dir/depend -Consolidate compiler generated dependencies of target unit_test_atom make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -Dependencies file "xtp/src/tests/CMakeFiles/unit_test_aotransform.dir/test_aotransform.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_aotransform.dir/compiler_depend.internal". -Dependencies file "xtp/src/tests/CMakeFiles/unit_test_qmatom.dir/test_qmatom.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_qmatom.dir/compiler_depend.internal". +make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_aomatrix.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' Consolidate compiler generated dependencies of target unit_test_aopotential make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_basisset.dir/DependInfo.cmake --color= -make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +Consolidate compiler generated dependencies of target unit_test_aotransform make -f xtp/src/tests/CMakeFiles/unit_test_aomatrix3d.dir/build.make xtp/src/tests/CMakeFiles/unit_test_aomatrix3d.dir/build -Consolidate compiler generated dependencies of target unit_test_qmatom -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_bseoperator_btda.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/src/tests/CMakeFiles/unit_test_aopotential.dir/build.make xtp/src/tests/CMakeFiles/unit_test_aopotential.dir/build -make -f xtp/src/tests/CMakeFiles/unit_test_atom.dir/build.make xtp/src/tests/CMakeFiles/unit_test_atom.dir/build -Consolidate compiler generated dependencies of target unit_test_aotransform -Dependencies file "xtp/src/tests/CMakeFiles/unit_test_polarsegment.dir/test_polarsegment.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_polarsegment.dir/compiler_depend.internal". +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_polarsegment.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/src/tests/CMakeFiles/unit_test_qmatom.dir/build.make xtp/src/tests/CMakeFiles/unit_test_qmatom.dir/build -make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_aopotential.dir/build'. +Dependencies file "xtp/src/tests/CMakeFiles/unit_test_atom.dir/test_atom.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_atom.dir/compiler_depend.internal". +make -f xtp/src/tests/CMakeFiles/unit_test_aotransform.dir/build.make xtp/src/tests/CMakeFiles/unit_test_aotransform.dir/build +make -f xtp/src/tests/CMakeFiles/unit_test_aopotential.dir/build.make xtp/src/tests/CMakeFiles/unit_test_aopotential.dir/build +Consolidate compiler generated dependencies of target unit_test_atom +Dependencies file "xtp/src/tests/CMakeFiles/unit_test_qmatom.dir/test_qmatom.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_qmatom.dir/compiler_depend.internal". make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +Dependencies file "xtp/src/tests/CMakeFiles/unit_test_polarsegment.dir/test_polarsegment.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_polarsegment.dir/compiler_depend.internal". make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_aomatrix3d.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -Dependencies file "xtp/src/tests/CMakeFiles/unit_test_basisset.dir/test_basisset.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_basisset.dir/compiler_depend.internal". -make -f xtp/src/tests/CMakeFiles/unit_test_aotransform.dir/build.make xtp/src/tests/CMakeFiles/unit_test_aotransform.dir/build -make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -Dependencies file "xtp/src/tests/CMakeFiles/unit_test_qmmolecule.dir/test_qmmolecule.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_qmmolecule.dir/compiler_depend.internal". -make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_atom.dir/build'. +Consolidate compiler generated dependencies of target unit_test_qmatom +Consolidate compiler generated dependencies of target unit_test_polarsegment +make -f xtp/src/tests/CMakeFiles/unit_test_atom.dir/build.make xtp/src/tests/CMakeFiles/unit_test_atom.dir/build make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_qmatom.dir/build'. +make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_aopotential.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -Dependencies file "xtp/src/tests/CMakeFiles/unit_test_bseoperator_btda.dir/test_bseoperator_btda.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_bseoperator_btda.dir/compiler_depend.internal". -Consolidate compiler generated dependencies of target unit_test_polarsegment -Consolidate compiler generated dependencies of target unit_test_qmmolecule make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -Consolidate compiler generated dependencies of target unit_test_basisset make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_aotransform.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f xtp/src/tests/CMakeFiles/unit_test_qmatom.dir/build.make xtp/src/tests/CMakeFiles/unit_test_qmatom.dir/build +make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_atom.dir/build'. make -f xtp/src/tests/CMakeFiles/unit_test_polarsegment.dir/build.make xtp/src/tests/CMakeFiles/unit_test_polarsegment.dir/build make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/src/tests/CMakeFiles/unit_test_qmmolecule.dir/build.make xtp/src/tests/CMakeFiles/unit_test_qmmolecule.dir/build -[ 69%] Built target unit_test_aopotential -Consolidate compiler generated dependencies of target unit_test_bseoperator_btda -[ 69%] Built target unit_test_aomatrix3d -make -f xtp/src/tests/CMakeFiles/unit_test_basisset.dir/build.make xtp/src/tests/CMakeFiles/unit_test_basisset.dir/build +[ 69%] Built target unit_test_aomatrix +make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_qmatom.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/src/tests/CMakeFiles/unit_test_bseoperator_btda.dir/build.make xtp/src/tests/CMakeFiles/unit_test_bseoperator_btda.dir/build -[ 69%] Built target unit_test_atom make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_polarsegment.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 69%] Built target unit_test_aomatrix3d +[ 71%] Built target unit_test_aotransform +[ 71%] Built target unit_test_aopotential +[ 71%] Built target unit_test_atom +make -f xtp/src/tests/CMakeFiles/unit_test_qmmolecule.dir/build.make xtp/src/tests/CMakeFiles/unit_test_qmmolecule.dir/depend +[ 71%] Built target unit_test_qmatom make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_qmmolecule.dir/build'. -make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f xtp/src/tests/CMakeFiles/unit_test_basisset.dir/build.make xtp/src/tests/CMakeFiles/unit_test_basisset.dir/depend +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_qmmolecule.dir/DependInfo.cmake --color= +[ 71%] Built target unit_test_polarsegment +make -f xtp/src/tests/CMakeFiles/unit_test_bseoperator_btda.dir/build.make xtp/src/tests/CMakeFiles/unit_test_bseoperator_btda.dir/depend make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_basisset.dir/build'. -make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_basisset.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_bseoperator_btda.dir/build'. -make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 69%] Built target unit_test_qmatom -[ 71%] Built target unit_test_aotransform -[ 71%] Built target unit_test_polarsegment -[ 71%] Built target unit_test_qmmolecule +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_bseoperator_btda.dir/DependInfo.cmake --color= make -f xtp/src/tests/CMakeFiles/unit_test_bfgs_trm.dir/build.make xtp/src/tests/CMakeFiles/unit_test_bfgs_trm.dir/depend -make -f xtp/src/tests/CMakeFiles/unit_test_bse.dir/build.make xtp/src/tests/CMakeFiles/unit_test_bse.dir/depend +Dependencies file "xtp/src/tests/CMakeFiles/unit_test_qmmolecule.dir/test_qmmolecule.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_qmmolecule.dir/compiler_depend.internal". make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f xtp/src/tests/CMakeFiles/unit_test_bse.dir/build.make xtp/src/tests/CMakeFiles/unit_test_bse.dir/depend cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_bfgs_trm.dir/DependInfo.cmake --color= +Consolidate compiler generated dependencies of target unit_test_qmmolecule make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_bse.dir/DependInfo.cmake --color= +make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make -f xtp/src/tests/CMakeFiles/unit_test_convergenceacc.dir/build.make xtp/src/tests/CMakeFiles/unit_test_convergenceacc.dir/depend -[ 71%] Built target unit_test_bseoperator_btda -make -f xtp/src/tests/CMakeFiles/unit_test_dftcoupling.dir/build.make xtp/src/tests/CMakeFiles/unit_test_dftcoupling.dir/depend +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_bse.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_convergenceacc.dir/DependInfo.cmake --color= -make -f xtp/src/tests/CMakeFiles/unit_test_diis.dir/build.make xtp/src/tests/CMakeFiles/unit_test_diis.dir/depend +make -f xtp/src/tests/CMakeFiles/unit_test_qmmolecule.dir/build.make xtp/src/tests/CMakeFiles/unit_test_qmmolecule.dir/build +make -f xtp/src/tests/CMakeFiles/unit_test_dftcoupling.dir/build.make xtp/src/tests/CMakeFiles/unit_test_dftcoupling.dir/depend +Dependencies file "xtp/src/tests/CMakeFiles/unit_test_basisset.dir/test_basisset.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_basisset.dir/compiler_depend.internal". +Dependencies file "xtp/src/tests/CMakeFiles/unit_test_bfgs_trm.dir/test_bfgs_trm.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_bfgs_trm.dir/compiler_depend.internal". +Dependencies file "xtp/src/tests/CMakeFiles/unit_test_bseoperator_btda.dir/test_bseoperator_btda.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_bseoperator_btda.dir/compiler_depend.internal". +Consolidate compiler generated dependencies of target unit_test_bfgs_trm make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_dftcoupling.dir/DependInfo.cmake --color= -make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/src/tests/CMakeFiles/unit_test_ecpaobasis.dir/build.make xtp/src/tests/CMakeFiles/unit_test_ecpaobasis.dir/depend -[ 71%] Built target unit_test_basisset -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_diis.dir/DependInfo.cmake --color= -make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_ecpaobasis.dir/DependInfo.cmake --color= -make -f xtp/src/tests/CMakeFiles/unit_test_eigen.dir/build.make xtp/src/tests/CMakeFiles/unit_test_eigen.dir/depend -Dependencies file "xtp/src/tests/CMakeFiles/unit_test_bfgs_trm.dir/test_bfgs_trm.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_bfgs_trm.dir/compiler_depend.internal". +make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f xtp/src/tests/CMakeFiles/unit_test_diis.dir/build.make xtp/src/tests/CMakeFiles/unit_test_diis.dir/depend Dependencies file "xtp/src/tests/CMakeFiles/unit_test_bse.dir/test_bse.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_bse.dir/compiler_depend.internal". make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/src/tests/CMakeFiles/unit_test_eris.dir/build.make xtp/src/tests/CMakeFiles/unit_test_eris.dir/depend -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_eigen.dir/DependInfo.cmake --color= -Consolidate compiler generated dependencies of target unit_test_bfgs_trm -make -f xtp/src/tests/CMakeFiles/unit_test_espfit.dir/build.make xtp/src/tests/CMakeFiles/unit_test_espfit.dir/depend -make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_qmmolecule.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_eris.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_espfit.dir/DependInfo.cmake --color= +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_diis.dir/DependInfo.cmake --color= +Dependencies file "xtp/src/tests/CMakeFiles/unit_test_dftcoupling.dir/test_dftcoupling.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_dftcoupling.dir/compiler_depend.internal". make -f xtp/src/tests/CMakeFiles/unit_test_bfgs_trm.dir/build.make xtp/src/tests/CMakeFiles/unit_test_bfgs_trm.dir/build -Dependencies file "xtp/src/tests/CMakeFiles/unit_test_diis.dir/test_diis.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_diis.dir/compiler_depend.internal". Dependencies file "xtp/src/tests/CMakeFiles/unit_test_convergenceacc.dir/test_convergenceacc.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_convergenceacc.dir/compiler_depend.internal". -Consolidate compiler generated dependencies of target unit_test_diis -Consolidate compiler generated dependencies of target unit_test_bse -Dependencies file "xtp/src/tests/CMakeFiles/unit_test_dftcoupling.dir/test_dftcoupling.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_dftcoupling.dir/compiler_depend.internal". -Dependencies file "xtp/src/tests/CMakeFiles/unit_test_ecpaobasis.dir/test_ecpaobasis.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_ecpaobasis.dir/compiler_depend.internal". -make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/src/tests/CMakeFiles/unit_test_glink.dir/build.make xtp/src/tests/CMakeFiles/unit_test_glink.dir/depend +Consolidate compiler generated dependencies of target unit_test_bseoperator_btda make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -Consolidate compiler generated dependencies of target unit_test_convergenceacc +Consolidate compiler generated dependencies of target unit_test_basisset Consolidate compiler generated dependencies of target unit_test_dftcoupling make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f xtp/src/tests/CMakeFiles/unit_test_basisset.dir/build.make xtp/src/tests/CMakeFiles/unit_test_basisset.dir/build +make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +Consolidate compiler generated dependencies of target unit_test_bse +make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f xtp/src/tests/CMakeFiles/unit_test_bseoperator_btda.dir/build.make xtp/src/tests/CMakeFiles/unit_test_bseoperator_btda.dir/build +Consolidate compiler generated dependencies of target unit_test_convergenceacc make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_glink.dir/DependInfo.cmake --color= +make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_bfgs_trm.dir/build'. +make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make -f xtp/src/tests/CMakeFiles/unit_test_bse.dir/build.make xtp/src/tests/CMakeFiles/unit_test_bse.dir/build make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -Dependencies file "xtp/src/tests/CMakeFiles/unit_test_eigen.dir/test_eigen.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_eigen.dir/compiler_depend.internal". -make -f xtp/src/tests/CMakeFiles/unit_test_convergenceacc.dir/build.make xtp/src/tests/CMakeFiles/unit_test_convergenceacc.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_bfgs_trm.dir/build'. +make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_basisset.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -Dependencies file "xtp/src/tests/CMakeFiles/unit_test_espfit.dir/test_espfit.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_espfit.dir/compiler_depend.internal". -Consolidate compiler generated dependencies of target unit_test_eigen -Consolidate compiler generated dependencies of target unit_test_ecpaobasis -Dependencies file "xtp/src/tests/CMakeFiles/unit_test_eris.dir/test_eris.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_eris.dir/compiler_depend.internal". -make -f xtp/src/tests/CMakeFiles/unit_test_dftcoupling.dir/build.make xtp/src/tests/CMakeFiles/unit_test_dftcoupling.dir/build -Dependencies file "xtp/src/tests/CMakeFiles/unit_test_glink.dir/test_glink.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_glink.dir/compiler_depend.internal". +Dependencies file "xtp/src/tests/CMakeFiles/unit_test_diis.dir/test_diis.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_diis.dir/compiler_depend.internal". +make -f xtp/src/tests/CMakeFiles/unit_test_convergenceacc.dir/build.make xtp/src/tests/CMakeFiles/unit_test_convergenceacc.dir/build +make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_bseoperator_btda.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_bse.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f xtp/src/tests/CMakeFiles/unit_test_dftcoupling.dir/build.make xtp/src/tests/CMakeFiles/unit_test_dftcoupling.dir/build +Consolidate compiler generated dependencies of target unit_test_diis make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make -f xtp/src/tests/CMakeFiles/unit_test_diis.dir/build.make xtp/src/tests/CMakeFiles/unit_test_diis.dir/build -Consolidate compiler generated dependencies of target unit_test_glink -make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/src/tests/CMakeFiles/unit_test_ecpaobasis.dir/build.make xtp/src/tests/CMakeFiles/unit_test_ecpaobasis.dir/build -Consolidate compiler generated dependencies of target unit_test_eris -make -f xtp/src/tests/CMakeFiles/unit_test_eigen.dir/build.make xtp/src/tests/CMakeFiles/unit_test_eigen.dir/build -Consolidate compiler generated dependencies of target unit_test_espfit +[ 71%] Built target unit_test_qmmolecule make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_convergenceacc.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_diis.dir/build'. -make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/src/tests/CMakeFiles/unit_test_eris.dir/build.make xtp/src/tests/CMakeFiles/unit_test_eris.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_dftcoupling.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/src/tests/CMakeFiles/unit_test_espfit.dir/build.make xtp/src/tests/CMakeFiles/unit_test_espfit.dir/build -make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_ecpaobasis.dir/build'. -make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_eigen.dir/build'. -make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/src/tests/CMakeFiles/unit_test_glink.dir/build.make xtp/src/tests/CMakeFiles/unit_test_glink.dir/build -make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_espfit.dir/build'. -make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_eris.dir/build'. -make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_glink.dir/build'. +make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_diis.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' [ 71%] Built target unit_test_bfgs_trm +[ 71%] Built target unit_test_basisset +[ 71%] Built target unit_test_bseoperator_btda +[ 71%] Built target unit_test_bse +make -f xtp/src/tests/CMakeFiles/unit_test_ecpaobasis.dir/build.make xtp/src/tests/CMakeFiles/unit_test_ecpaobasis.dir/depend [ 72%] Built target unit_test_convergenceacc -[ 72%] Built target unit_test_bse +make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_ecpaobasis.dir/DependInfo.cmake --color= [ 72%] Built target unit_test_dftcoupling +make -f xtp/src/tests/CMakeFiles/unit_test_eigen.dir/build.make xtp/src/tests/CMakeFiles/unit_test_eigen.dir/depend +make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_eigen.dir/DependInfo.cmake --color= [ 72%] Built target unit_test_diis -[ 72%] Built target unit_test_eigen -[ 72%] Built target unit_test_ecpaobasis +make -f xtp/src/tests/CMakeFiles/unit_test_eris.dir/build.make xtp/src/tests/CMakeFiles/unit_test_eris.dir/depend +make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_eris.dir/DependInfo.cmake --color= +make -f xtp/src/tests/CMakeFiles/unit_test_espfit.dir/build.make xtp/src/tests/CMakeFiles/unit_test_espfit.dir/depend +make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_espfit.dir/DependInfo.cmake --color= +make -f xtp/src/tests/CMakeFiles/unit_test_glink.dir/build.make xtp/src/tests/CMakeFiles/unit_test_glink.dir/depend +make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_glink.dir/DependInfo.cmake --color= make -f xtp/src/tests/CMakeFiles/unit_test_hdf5.dir/build.make xtp/src/tests/CMakeFiles/unit_test_hdf5.dir/depend -[ 73%] Built target unit_test_eris -[ 73%] Built target unit_test_espfit make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/src/tests/CMakeFiles/unit_test_cubefile_writer.dir/build.make xtp/src/tests/CMakeFiles/unit_test_cubefile_writer.dir/depend cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_hdf5.dir/DependInfo.cmake --color= +make -f xtp/src/tests/CMakeFiles/unit_test_cubefile_writer.dir/build.make xtp/src/tests/CMakeFiles/unit_test_cubefile_writer.dir/depend +Dependencies file "xtp/src/tests/CMakeFiles/unit_test_ecpaobasis.dir/test_ecpaobasis.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_ecpaobasis.dir/compiler_depend.internal". +Dependencies file "xtp/src/tests/CMakeFiles/unit_test_glink.dir/test_glink.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_glink.dir/compiler_depend.internal". make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_cubefile_writer.dir/DependInfo.cmake --color= make -f xtp/src/tests/CMakeFiles/unit_test_densityintegration.dir/build.make xtp/src/tests/CMakeFiles/unit_test_densityintegration.dir/depend +Consolidate compiler generated dependencies of target unit_test_glink +Dependencies file "xtp/src/tests/CMakeFiles/unit_test_eigen.dir/test_eigen.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_eigen.dir/compiler_depend.internal". +make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f xtp/src/tests/CMakeFiles/unit_test_glink.dir/build.make xtp/src/tests/CMakeFiles/unit_test_glink.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_densityintegration.dir/DependInfo.cmake --color= make -f xtp/src/tests/CMakeFiles/unit_test_vxc_potential.dir/build.make xtp/src/tests/CMakeFiles/unit_test_vxc_potential.dir/depend -[ 73%] Built target unit_test_glink +Dependencies file "xtp/src/tests/CMakeFiles/unit_test_eris.dir/test_eris.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_eris.dir/compiler_depend.internal". make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_vxc_potential.dir/DependInfo.cmake --color= make -f xtp/src/tests/CMakeFiles/unit_test_vxc_grid.dir/build.make xtp/src/tests/CMakeFiles/unit_test_vxc_grid.dir/depend make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_vxc_grid.dir/DependInfo.cmake --color= -make -f xtp/src/tests/CMakeFiles/unit_test_regular_grid.dir/build.make xtp/src/tests/CMakeFiles/unit_test_regular_grid.dir/depend -make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_regular_grid.dir/DependInfo.cmake --color= -make -f xtp/src/tests/CMakeFiles/unit_test_orbitals.dir/build.make xtp/src/tests/CMakeFiles/unit_test_orbitals.dir/depend +make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_glink.dir/build'. +make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +Consolidate compiler generated dependencies of target unit_test_eigen +make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +Consolidate compiler generated dependencies of target unit_test_ecpaobasis +make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' Dependencies file "xtp/src/tests/CMakeFiles/unit_test_hdf5.dir/test_hdf5.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_hdf5.dir/compiler_depend.internal". +Dependencies file "xtp/src/tests/CMakeFiles/unit_test_espfit.dir/test_espfit.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_espfit.dir/compiler_depend.internal". make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_orbitals.dir/DependInfo.cmake --color= -make -f xtp/src/tests/CMakeFiles/unit_test_polarsite.dir/build.make xtp/src/tests/CMakeFiles/unit_test_polarsite.dir/depend +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_vxc_grid.dir/DependInfo.cmake --color= +make -f xtp/src/tests/CMakeFiles/unit_test_ecpaobasis.dir/build.make xtp/src/tests/CMakeFiles/unit_test_ecpaobasis.dir/build Dependencies file "xtp/src/tests/CMakeFiles/unit_test_cubefile_writer.dir/test_cubefile_writer.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_cubefile_writer.dir/compiler_depend.internal". -Dependencies file "xtp/src/tests/CMakeFiles/unit_test_vxc_potential.dir/test_vxc_potential.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_vxc_potential.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target unit_test_hdf5 -Dependencies file "xtp/src/tests/CMakeFiles/unit_test_vxc_grid.dir/test_vxc_grid.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_vxc_grid.dir/compiler_depend.internal". -make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_polarsite.dir/DependInfo.cmake --color= +make -f xtp/src/tests/CMakeFiles/unit_test_eigen.dir/build.make xtp/src/tests/CMakeFiles/unit_test_eigen.dir/build +Consolidate compiler generated dependencies of target unit_test_eris +Dependencies file "xtp/src/tests/CMakeFiles/unit_test_vxc_potential.dir/test_vxc_potential.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_vxc_potential.dir/compiler_depend.internal". make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/src/tests/CMakeFiles/unit_test_staticsite.dir/build.make xtp/src/tests/CMakeFiles/unit_test_staticsite.dir/depend -Consolidate compiler generated dependencies of target unit_test_vxc_grid -make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_staticsite.dir/DependInfo.cmake --color= -Dependencies file "xtp/src/tests/CMakeFiles/unit_test_densityintegration.dir/test_densityintegration.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_densityintegration.dir/compiler_depend.internal". make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/src/tests/CMakeFiles/unit_test_hdf5.dir/build.make xtp/src/tests/CMakeFiles/unit_test_hdf5.dir/build +Dependencies file "xtp/src/tests/CMakeFiles/unit_test_densityintegration.dir/test_densityintegration.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_densityintegration.dir/compiler_depend.internal". +Consolidate compiler generated dependencies of target unit_test_espfit Consolidate compiler generated dependencies of target unit_test_cubefile_writer -make -f xtp/src/tests/CMakeFiles/unit_test_vxc_grid.dir/build.make xtp/src/tests/CMakeFiles/unit_test_vxc_grid.dir/build make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -Dependencies file "xtp/src/tests/CMakeFiles/unit_test_orbitals.dir/test_orbitals.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_orbitals.dir/compiler_depend.internal". -Dependencies file "xtp/src/tests/CMakeFiles/unit_test_polarsite.dir/test_polarsite.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_polarsite.dir/compiler_depend.internal". +make -f xtp/src/tests/CMakeFiles/unit_test_eris.dir/build.make xtp/src/tests/CMakeFiles/unit_test_eris.dir/build +make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' Consolidate compiler generated dependencies of target unit_test_vxc_potential make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/src/tests/CMakeFiles/unit_test_cubefile_writer.dir/build.make xtp/src/tests/CMakeFiles/unit_test_cubefile_writer.dir/build -Dependencies file "xtp/src/tests/CMakeFiles/unit_test_regular_grid.dir/test_regular_grid.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_regular_grid.dir/compiler_depend.internal". +make -f xtp/src/tests/CMakeFiles/unit_test_espfit.dir/build.make xtp/src/tests/CMakeFiles/unit_test_espfit.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_hdf5.dir/build'. +make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_eigen.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/src/tests/CMakeFiles/unit_test_vxc_potential.dir/build.make xtp/src/tests/CMakeFiles/unit_test_vxc_potential.dir/build -Consolidate compiler generated dependencies of target unit_test_polarsite -Dependencies file "xtp/src/tests/CMakeFiles/unit_test_staticsite.dir/test_staticsite.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_staticsite.dir/compiler_depend.internal". +make -f xtp/src/tests/CMakeFiles/unit_test_hdf5.dir/build.make xtp/src/tests/CMakeFiles/unit_test_hdf5.dir/build +Dependencies file "xtp/src/tests/CMakeFiles/unit_test_vxc_grid.dir/test_vxc_grid.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_vxc_grid.dir/compiler_depend.internal". +make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_ecpaobasis.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' Consolidate compiler generated dependencies of target unit_test_densityintegration -Consolidate compiler generated dependencies of target unit_test_orbitals -make -f xtp/src/tests/CMakeFiles/unit_test_polarsite.dir/build.make xtp/src/tests/CMakeFiles/unit_test_polarsite.dir/build -Consolidate compiler generated dependencies of target unit_test_regular_grid make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/src/tests/CMakeFiles/unit_test_orbitals.dir/build.make xtp/src/tests/CMakeFiles/unit_test_orbitals.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/src/tests/CMakeFiles/unit_test_densityintegration.dir/build.make xtp/src/tests/CMakeFiles/unit_test_densityintegration.dir/build -make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_vxc_grid.dir/build'. +make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_espfit.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_cubefile_writer.dir/build'. +make -f xtp/src/tests/CMakeFiles/unit_test_cubefile_writer.dir/build.make xtp/src/tests/CMakeFiles/unit_test_cubefile_writer.dir/build +Consolidate compiler generated dependencies of target unit_test_vxc_grid make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -Consolidate compiler generated dependencies of target unit_test_staticsite -make -f xtp/src/tests/CMakeFiles/unit_test_regular_grid.dir/build.make xtp/src/tests/CMakeFiles/unit_test_regular_grid.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_vxc_potential.dir/build'. +make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_eris.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f xtp/src/tests/CMakeFiles/unit_test_densityintegration.dir/build.make xtp/src/tests/CMakeFiles/unit_test_densityintegration.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_polarsite.dir/build'. -make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_hdf5.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_orbitals.dir/build'. +make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_cubefile_writer.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/src/tests/CMakeFiles/unit_test_staticsite.dir/build.make xtp/src/tests/CMakeFiles/unit_test_staticsite.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f xtp/src/tests/CMakeFiles/unit_test_vxc_potential.dir/build.make xtp/src/tests/CMakeFiles/unit_test_vxc_potential.dir/build make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_densityintegration.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f xtp/src/tests/CMakeFiles/unit_test_vxc_grid.dir/build.make xtp/src/tests/CMakeFiles/unit_test_vxc_grid.dir/build +[ 72%] Built target unit_test_glink make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_staticsite.dir/build'. +make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_vxc_potential.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 75%] Built target unit_test_hdf5 make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_regular_grid.dir/build'. +make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_vxc_grid.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 75%] Built target unit_test_vxc_grid +[ 72%] Built target unit_test_ecpaobasis +[ 72%] Built target unit_test_eigen +[ 73%] Built target unit_test_eris +[ 73%] Built target unit_test_espfit +[ 75%] Built target unit_test_hdf5 [ 75%] Built target unit_test_cubefile_writer +make -f xtp/src/tests/CMakeFiles/unit_test_regular_grid.dir/build.make xtp/src/tests/CMakeFiles/unit_test_regular_grid.dir/depend +[ 75%] Built target unit_test_vxc_potential +make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_regular_grid.dir/DependInfo.cmake --color= +make -f xtp/src/tests/CMakeFiles/unit_test_orbitals.dir/build.make xtp/src/tests/CMakeFiles/unit_test_orbitals.dir/depend +make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_orbitals.dir/DependInfo.cmake --color= +make -f xtp/src/tests/CMakeFiles/unit_test_polarsite.dir/build.make xtp/src/tests/CMakeFiles/unit_test_polarsite.dir/depend [ 76%] Built target unit_test_densityintegration -[ 76%] Built target unit_test_polarsite -[ 76%] Built target unit_test_vxc_potential +make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f xtp/src/tests/CMakeFiles/unit_test_staticsite.dir/build.make xtp/src/tests/CMakeFiles/unit_test_staticsite.dir/depend +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_polarsite.dir/DependInfo.cmake --color= +[ 76%] Built target unit_test_vxc_grid +make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_staticsite.dir/DependInfo.cmake --color= make -f xtp/src/tests/CMakeFiles/unit_test_ppm.dir/build.make xtp/src/tests/CMakeFiles/unit_test_ppm.dir/depend -[ 76%] Built target unit_test_orbitals -[ 76%] Built target unit_test_regular_grid -make -f xtp/src/tests/CMakeFiles/unit_test_qmnblist.dir/build.make xtp/src/tests/CMakeFiles/unit_test_qmnblist.dir/depend make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_ppm.dir/DependInfo.cmake --color= +make -f xtp/src/tests/CMakeFiles/unit_test_qmnblist.dir/build.make xtp/src/tests/CMakeFiles/unit_test_qmnblist.dir/depend +Dependencies file "xtp/src/tests/CMakeFiles/unit_test_orbitals.dir/test_orbitals.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_orbitals.dir/compiler_depend.internal". +Dependencies file "xtp/src/tests/CMakeFiles/unit_test_regular_grid.dir/test_regular_grid.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_regular_grid.dir/compiler_depend.internal". make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_qmnblist.dir/DependInfo.cmake --color= make -f xtp/src/tests/CMakeFiles/unit_test_qmpair.dir/build.make xtp/src/tests/CMakeFiles/unit_test_qmpair.dir/depend -[ 76%] Built target unit_test_staticsite make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_qmpair.dir/DependInfo.cmake --color= make -f xtp/src/tests/CMakeFiles/unit_test_qmstate.dir/build.make xtp/src/tests/CMakeFiles/unit_test_qmstate.dir/depend -make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_qmstate.dir/DependInfo.cmake --color= +Dependencies file "xtp/src/tests/CMakeFiles/unit_test_polarsite.dir/test_polarsite.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_polarsite.dir/compiler_depend.internal". +Dependencies file "xtp/src/tests/CMakeFiles/unit_test_staticsite.dir/test_staticsite.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_staticsite.dir/compiler_depend.internal". make -f xtp/src/tests/CMakeFiles/unit_test_radial_euler_maclaurin_rule.dir/build.make xtp/src/tests/CMakeFiles/unit_test_radial_euler_maclaurin_rule.dir/depend -Dependencies file "xtp/src/tests/CMakeFiles/unit_test_qmpair.dir/test_qmpair.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_qmpair.dir/compiler_depend.internal". make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_radial_euler_maclaurin_rule.dir/DependInfo.cmake --color= -make -f xtp/src/tests/CMakeFiles/unit_test_rpa.dir/build.make xtp/src/tests/CMakeFiles/unit_test_rpa.dir/depend +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_qmstate.dir/DependInfo.cmake --color= +Consolidate compiler generated dependencies of target unit_test_regular_grid +Consolidate compiler generated dependencies of target unit_test_orbitals +make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +Dependencies file "xtp/src/tests/CMakeFiles/unit_test_ppm.dir/test_ppm.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_ppm.dir/compiler_depend.internal". +Consolidate compiler generated dependencies of target unit_test_polarsite +Consolidate compiler generated dependencies of target unit_test_staticsite Dependencies file "xtp/src/tests/CMakeFiles/unit_test_qmnblist.dir/test_qmnblist.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_qmnblist.dir/compiler_depend.internal". -Consolidate compiler generated dependencies of target unit_test_qmpair make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f xtp/src/tests/CMakeFiles/unit_test_regular_grid.dir/build.make xtp/src/tests/CMakeFiles/unit_test_regular_grid.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_rpa.dir/DependInfo.cmake --color= -Dependencies file "xtp/src/tests/CMakeFiles/unit_test_ppm.dir/test_ppm.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_ppm.dir/compiler_depend.internal". -make -f xtp/src/tests/CMakeFiles/unit_test_qmpair.dir/build.make xtp/src/tests/CMakeFiles/unit_test_qmpair.dir/build -Dependencies file "xtp/src/tests/CMakeFiles/unit_test_qmstate.dir/test_qmstate.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_qmstate.dir/compiler_depend.internal". +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_radial_euler_maclaurin_rule.dir/DependInfo.cmake --color= +make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f xtp/src/tests/CMakeFiles/unit_test_orbitals.dir/build.make xtp/src/tests/CMakeFiles/unit_test_orbitals.dir/build +Dependencies file "xtp/src/tests/CMakeFiles/unit_test_qmpair.dir/test_qmpair.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_qmpair.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target unit_test_qmnblist -make -f xtp/src/tests/CMakeFiles/unit_test_rpa_h2p.dir/build.make xtp/src/tests/CMakeFiles/unit_test_rpa_h2p.dir/depend -Dependencies file "xtp/src/tests/CMakeFiles/unit_test_radial_euler_maclaurin_rule.dir/test_radial_euler_maclaurin_rule.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_radial_euler_maclaurin_rule.dir/compiler_depend.internal". -Consolidate compiler generated dependencies of target unit_test_qmstate +make -f xtp/src/tests/CMakeFiles/unit_test_polarsite.dir/build.make xtp/src/tests/CMakeFiles/unit_test_polarsite.dir/build +Dependencies file "xtp/src/tests/CMakeFiles/unit_test_qmstate.dir/test_qmstate.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_qmstate.dir/compiler_depend.internal". make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_rpa_h2p.dir/DependInfo.cmake --color= Consolidate compiler generated dependencies of target unit_test_ppm make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/src/tests/CMakeFiles/unit_test_qmstate.dir/build.make xtp/src/tests/CMakeFiles/unit_test_qmstate.dir/build +Consolidate compiler generated dependencies of target unit_test_qmpair +make -f xtp/src/tests/CMakeFiles/unit_test_staticsite.dir/build.make xtp/src/tests/CMakeFiles/unit_test_staticsite.dir/build +make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_regular_grid.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +Dependencies file "xtp/src/tests/CMakeFiles/unit_test_radial_euler_maclaurin_rule.dir/test_radial_euler_maclaurin_rule.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_radial_euler_maclaurin_rule.dir/compiler_depend.internal". make -f xtp/src/tests/CMakeFiles/unit_test_ppm.dir/build.make xtp/src/tests/CMakeFiles/unit_test_ppm.dir/build -Dependencies file "xtp/src/tests/CMakeFiles/unit_test_rpa.dir/test_rpa.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_rpa.dir/compiler_depend.internal". -Consolidate compiler generated dependencies of target unit_test_radial_euler_maclaurin_rule +Consolidate compiler generated dependencies of target unit_test_qmstate make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_qmpair.dir/build'. +make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_orbitals.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make -f xtp/src/tests/CMakeFiles/unit_test_qmnblist.dir/build.make xtp/src/tests/CMakeFiles/unit_test_qmnblist.dir/build +make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_polarsite.dir/build'. +make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +Consolidate compiler generated dependencies of target unit_test_radial_euler_maclaurin_rule make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -Consolidate compiler generated dependencies of target unit_test_rpa -make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_qmstate.dir/build'. +make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_staticsite.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/src/tests/CMakeFiles/unit_test_radial_euler_maclaurin_rule.dir/build.make xtp/src/tests/CMakeFiles/unit_test_radial_euler_maclaurin_rule.dir/build -Dependencies file "xtp/src/tests/CMakeFiles/unit_test_rpa_h2p.dir/test_rpa_h2p.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_rpa_h2p.dir/compiler_depend.internal". -make -f xtp/src/tests/CMakeFiles/unit_test_rpa.dir/build.make xtp/src/tests/CMakeFiles/unit_test_rpa.dir/build +make -f xtp/src/tests/CMakeFiles/unit_test_qmpair.dir/build.make xtp/src/tests/CMakeFiles/unit_test_qmpair.dir/build +make -f xtp/src/tests/CMakeFiles/unit_test_qmstate.dir/build.make xtp/src/tests/CMakeFiles/unit_test_qmstate.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_qmnblist.dir/build'. +make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_ppm.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -Consolidate compiler generated dependencies of target unit_test_rpa_h2p make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_ppm.dir/build'. +make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_qmnblist.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f xtp/src/tests/CMakeFiles/unit_test_radial_euler_maclaurin_rule.dir/build.make xtp/src/tests/CMakeFiles/unit_test_radial_euler_maclaurin_rule.dir/build +make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_qmpair.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/src/tests/CMakeFiles/unit_test_rpa_h2p.dir/build.make xtp/src/tests/CMakeFiles/unit_test_rpa_h2p.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_radial_euler_maclaurin_rule.dir/build'. +make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_qmstate.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_rpa.dir/build'. +make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_radial_euler_maclaurin_rule.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 76%] Built target unit_test_regular_grid +[ 76%] Built target unit_test_orbitals +[ 76%] Built target unit_test_polarsite +[ 76%] Built target unit_test_staticsite +[ 76%] Built target unit_test_ppm +[ 76%] Built target unit_test_qmnblist +make -f xtp/src/tests/CMakeFiles/unit_test_rpa.dir/build.make xtp/src/tests/CMakeFiles/unit_test_rpa.dir/depend +[ 76%] Built target unit_test_qmpair [ 78%] Built target unit_test_qmstate -make -f xtp/src/tests/CMakeFiles/unit_test_segment.dir/build.make xtp/src/tests/CMakeFiles/unit_test_segment.dir/depend make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/src/tests/CMakeFiles/unit_test_aoshell.dir/build.make xtp/src/tests/CMakeFiles/unit_test_aoshell.dir/depend -[ 78%] Built target unit_test_qmnblist -[ 78%] Built target unit_test_ppm -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_segment.dir/DependInfo.cmake --color= +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_rpa.dir/DependInfo.cmake --color= +make -f xtp/src/tests/CMakeFiles/unit_test_rpa_h2p.dir/build.make xtp/src/tests/CMakeFiles/unit_test_rpa_h2p.dir/depend +make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_rpa_h2p.dir/DependInfo.cmake --color= +make -f xtp/src/tests/CMakeFiles/unit_test_segment.dir/build.make xtp/src/tests/CMakeFiles/unit_test_segment.dir/depend [ 78%] Built target unit_test_radial_euler_maclaurin_rule -[ 78%] Built target unit_test_qmpair +Dependencies file "xtp/src/tests/CMakeFiles/unit_test_rpa.dir/test_rpa.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_rpa.dir/compiler_depend.internal". make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_rpa_h2p.dir/build'. +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_segment.dir/DependInfo.cmake --color= +make -f xtp/src/tests/CMakeFiles/unit_test_aoshell.dir/build.make xtp/src/tests/CMakeFiles/unit_test_aoshell.dir/depend +Consolidate compiler generated dependencies of target unit_test_rpa make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 78%] Built target unit_test_rpa make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_aoshell.dir/DependInfo.cmake --color= +make -f xtp/src/tests/CMakeFiles/unit_test_rpa.dir/build.make xtp/src/tests/CMakeFiles/unit_test_rpa.dir/build make -f xtp/src/tests/CMakeFiles/unit_test_sphere_lebedev_rule.dir/build.make xtp/src/tests/CMakeFiles/unit_test_sphere_lebedev_rule.dir/depend Dependencies file "xtp/src/tests/CMakeFiles/unit_test_segment.dir/test_segment.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_segment.dir/compiler_depend.internal". -Dependencies file "xtp/src/tests/CMakeFiles/unit_test_aoshell.dir/test_aoshell.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_aoshell.dir/compiler_depend.internal". -Consolidate compiler generated dependencies of target unit_test_segment -make -f xtp/src/tests/CMakeFiles/unit_test_statetracker.dir/build.make xtp/src/tests/CMakeFiles/unit_test_statetracker.dir/depend +Dependencies file "xtp/src/tests/CMakeFiles/unit_test_rpa_h2p.dir/test_rpa_h2p.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_rpa_h2p.dir/compiler_depend.internal". make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_sphere_lebedev_rule.dir/DependInfo.cmake --color= +make -f xtp/src/tests/CMakeFiles/unit_test_statetracker.dir/build.make xtp/src/tests/CMakeFiles/unit_test_statetracker.dir/depend +Consolidate compiler generated dependencies of target unit_test_segment +make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_statetracker.dir/DependInfo.cmake --color= -[ 79%] Built target unit_test_rpa_h2p +make -f xtp/src/tests/CMakeFiles/unit_test_segment.dir/build.make xtp/src/tests/CMakeFiles/unit_test_segment.dir/build make -f xtp/src/tests/CMakeFiles/unit_test_symmetric_matrix.dir/build.make xtp/src/tests/CMakeFiles/unit_test_symmetric_matrix.dir/depend +Dependencies file "xtp/src/tests/CMakeFiles/unit_test_aoshell.dir/test_aoshell.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_aoshell.dir/compiler_depend.internal". +make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_rpa.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/src/tests/CMakeFiles/unit_test_threecenter_dft.dir/build.make xtp/src/tests/CMakeFiles/unit_test_threecenter_dft.dir/depend make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_symmetric_matrix.dir/DependInfo.cmake --color= -Consolidate compiler generated dependencies of target unit_test_aoshell +make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_segment.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/src/tests/CMakeFiles/unit_test_segment.dir/build.make xtp/src/tests/CMakeFiles/unit_test_segment.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_threecenter_dft.dir/DependInfo.cmake --color= +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_symmetric_matrix.dir/DependInfo.cmake --color= +Consolidate compiler generated dependencies of target unit_test_rpa_h2p +make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f xtp/src/tests/CMakeFiles/unit_test_rpa_h2p.dir/build.make xtp/src/tests/CMakeFiles/unit_test_rpa_h2p.dir/build Dependencies file "xtp/src/tests/CMakeFiles/unit_test_sphere_lebedev_rule.dir/test_sphere_lebedev_rule.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_sphere_lebedev_rule.dir/compiler_depend.internal". -make -f xtp/src/tests/CMakeFiles/unit_test_aoshell.dir/build.make xtp/src/tests/CMakeFiles/unit_test_aoshell.dir/build -make -f xtp/src/tests/CMakeFiles/unit_test_threecenter_gwbse.dir/build.make xtp/src/tests/CMakeFiles/unit_test_threecenter_gwbse.dir/depend -Dependencies file "xtp/src/tests/CMakeFiles/unit_test_symmetric_matrix.dir/test_symmetric_matrix.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_symmetric_matrix.dir/compiler_depend.internal". -Consolidate compiler generated dependencies of target unit_test_sphere_lebedev_rule Dependencies file "xtp/src/tests/CMakeFiles/unit_test_statetracker.dir/test_statetracker.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_statetracker.dir/compiler_depend.internal". +Consolidate compiler generated dependencies of target unit_test_aoshell make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +Dependencies file "xtp/src/tests/CMakeFiles/unit_test_symmetric_matrix.dir/test_symmetric_matrix.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_symmetric_matrix.dir/compiler_depend.internal". +make -f xtp/src/tests/CMakeFiles/unit_test_aoshell.dir/build.make xtp/src/tests/CMakeFiles/unit_test_aoshell.dir/build +[ 78%] Built target unit_test_rpa +Consolidate compiler generated dependencies of target unit_test_sphere_lebedev_rule Consolidate compiler generated dependencies of target unit_test_symmetric_matrix -make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_segment.dir/build'. +make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +Consolidate compiler generated dependencies of target unit_test_statetracker +make -f xtp/src/tests/CMakeFiles/unit_test_symmetric_matrix.dir/build.make xtp/src/tests/CMakeFiles/unit_test_symmetric_matrix.dir/build make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_threecenter_gwbse.dir/DependInfo.cmake --color= +make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_rpa_h2p.dir/build'. +make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make -f xtp/src/tests/CMakeFiles/unit_test_sphere_lebedev_rule.dir/build.make xtp/src/tests/CMakeFiles/unit_test_sphere_lebedev_rule.dir/build -make -f xtp/src/tests/CMakeFiles/unit_test_symmetric_matrix.dir/build.make xtp/src/tests/CMakeFiles/unit_test_symmetric_matrix.dir/build +[ 78%] Built target unit_test_segment make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_aoshell.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -Consolidate compiler generated dependencies of target unit_test_statetracker -make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_sphere_lebedev_rule.dir/build'. -make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -Dependencies file "xtp/src/tests/CMakeFiles/unit_test_threecenter_dft.dir/test_threecenter_dft.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_threecenter_dft.dir/compiler_depend.internal". make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_symmetric_matrix.dir/build'. -make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -Dependencies file "xtp/src/tests/CMakeFiles/unit_test_threecenter_gwbse.dir/test_threecenter_gwbse.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_threecenter_gwbse.dir/compiler_depend.internal". make -f xtp/src/tests/CMakeFiles/unit_test_statetracker.dir/build.make xtp/src/tests/CMakeFiles/unit_test_statetracker.dir/build -Consolidate compiler generated dependencies of target unit_test_threecenter_gwbse -Consolidate compiler generated dependencies of target unit_test_threecenter_dft -[ 79%] Built target unit_test_segment make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/src/tests/CMakeFiles/unit_test_threecenter_gwbse.dir/build.make xtp/src/tests/CMakeFiles/unit_test_threecenter_gwbse.dir/build +make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_sphere_lebedev_rule.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/src/tests/CMakeFiles/unit_test_threecenter_dft.dir/build.make xtp/src/tests/CMakeFiles/unit_test_threecenter_dft.dir/build -[ 79%] Built target unit_test_aoshell make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_statetracker.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 79%] Built target unit_test_rpa_h2p +[ 79%] Built target unit_test_aoshell +[ 79%] Built target unit_test_symmetric_matrix +make -f xtp/src/tests/CMakeFiles/unit_test_threecenter_dft.dir/build.make xtp/src/tests/CMakeFiles/unit_test_threecenter_dft.dir/depend [ 79%] Built target unit_test_sphere_lebedev_rule make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_threecenter_dft.dir/build'. -make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_threecenter_dft.dir/DependInfo.cmake --color= +make -f xtp/src/tests/CMakeFiles/unit_test_threecenter_gwbse.dir/build.make xtp/src/tests/CMakeFiles/unit_test_threecenter_gwbse.dir/depend +[ 79%] Built target unit_test_statetracker make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_threecenter_gwbse.dir/build'. -make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 79%] Built target unit_test_symmetric_matrix +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_threecenter_gwbse.dir/DependInfo.cmake --color= make -f xtp/src/tests/CMakeFiles/unit_test_topology.dir/build.make xtp/src/tests/CMakeFiles/unit_test_topology.dir/depend -[ 79%] Built target unit_test_statetracker -make -f xtp/src/tests/CMakeFiles/unit_test_sigma_exact.dir/build.make xtp/src/tests/CMakeFiles/unit_test_sigma_exact.dir/depend make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_topology.dir/DependInfo.cmake --color= +make -f xtp/src/tests/CMakeFiles/unit_test_sigma_exact.dir/build.make xtp/src/tests/CMakeFiles/unit_test_sigma_exact.dir/depend make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_sigma_exact.dir/DependInfo.cmake --color= make -f xtp/src/tests/CMakeFiles/unit_test_sigma_ppm.dir/build.make xtp/src/tests/CMakeFiles/unit_test_sigma_ppm.dir/depend +Dependencies file "xtp/src/tests/CMakeFiles/unit_test_threecenter_dft.dir/test_threecenter_dft.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_threecenter_dft.dir/compiler_depend.internal". make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_sigma_ppm.dir/DependInfo.cmake --color= make -f xtp/src/tests/CMakeFiles/unit_test_sigma_cda.dir/build.make xtp/src/tests/CMakeFiles/unit_test_sigma_cda.dir/depend +Consolidate compiler generated dependencies of target unit_test_threecenter_dft +make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_sigma_cda.dir/DependInfo.cmake --color= +make -f xtp/src/tests/CMakeFiles/unit_test_threecenter_dft.dir/build.make xtp/src/tests/CMakeFiles/unit_test_threecenter_dft.dir/build +Dependencies file "xtp/src/tests/CMakeFiles/unit_test_threecenter_gwbse.dir/test_threecenter_gwbse.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_threecenter_gwbse.dir/compiler_depend.internal". +Dependencies file "xtp/src/tests/CMakeFiles/unit_test_topology.dir/test_topology.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_topology.dir/compiler_depend.internal". make -f xtp/src/tests/CMakeFiles/unit_test_gw.dir/build.make xtp/src/tests/CMakeFiles/unit_test_gw.dir/depend +Dependencies file "xtp/src/tests/CMakeFiles/unit_test_sigma_ppm.dir/test_sigma_ppm.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_sigma_ppm.dir/compiler_depend.internal". +Dependencies file "xtp/src/tests/CMakeFiles/unit_test_sigma_exact.dir/test_sigma_exact.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_sigma_exact.dir/compiler_depend.internal". make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_gw.dir/DependInfo.cmake --color= make -f xtp/src/tests/CMakeFiles/unit_test_bse_operator.dir/build.make xtp/src/tests/CMakeFiles/unit_test_bse_operator.dir/depend -[ 79%] Built target unit_test_threecenter_dft -Dependencies file "xtp/src/tests/CMakeFiles/unit_test_topology.dir/test_topology.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_topology.dir/compiler_depend.internal". -make -f xtp/src/tests/CMakeFiles/unit_test_davidson.dir/build.make xtp/src/tests/CMakeFiles/unit_test_davidson.dir/depend +Consolidate compiler generated dependencies of target unit_test_sigma_ppm make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_bse_operator.dir/DependInfo.cmake --color= +make -f xtp/src/tests/CMakeFiles/unit_test_davidson.dir/build.make xtp/src/tests/CMakeFiles/unit_test_davidson.dir/depend +make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +Consolidate compiler generated dependencies of target unit_test_topology +make -f xtp/src/tests/CMakeFiles/unit_test_sigma_ppm.dir/build.make xtp/src/tests/CMakeFiles/unit_test_sigma_ppm.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 79%] Built target unit_test_threecenter_gwbse cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_davidson.dir/DependInfo.cmake --color= +make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_threecenter_dft.dir/build'. +make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make -f xtp/src/tests/CMakeFiles/unit_test_trustregion.dir/build.make xtp/src/tests/CMakeFiles/unit_test_trustregion.dir/depend -Consolidate compiler generated dependencies of target unit_test_topology +Consolidate compiler generated dependencies of target unit_test_threecenter_gwbse Dependencies file "xtp/src/tests/CMakeFiles/unit_test_sigma_cda.dir/test_sigma_cda.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_sigma_cda.dir/compiler_depend.internal". -make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/src/tests/CMakeFiles/unit_test_gnode.dir/build.make xtp/src/tests/CMakeFiles/unit_test_gnode.dir/depend make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -Dependencies file "xtp/src/tests/CMakeFiles/unit_test_sigma_exact.dir/test_sigma_exact.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_sigma_exact.dir/compiler_depend.internal". -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_trustregion.dir/DependInfo.cmake --color= -make -f xtp/src/tests/CMakeFiles/unit_test_topology.dir/build.make xtp/src/tests/CMakeFiles/unit_test_topology.dir/build +make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_gnode.dir/DependInfo.cmake --color= -Dependencies file "xtp/src/tests/CMakeFiles/unit_test_gw.dir/test_gw.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_gw.dir/compiler_depend.internal". -make -f xtp/src/tests/CMakeFiles/unit_test_vc2index.dir/build.make xtp/src/tests/CMakeFiles/unit_test_vc2index.dir/depend -Dependencies file "xtp/src/tests/CMakeFiles/unit_test_bse_operator.dir/test_bse_operator.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_bse_operator.dir/compiler_depend.internal". +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_trustregion.dir/DependInfo.cmake --color= +make -f xtp/src/tests/CMakeFiles/unit_test_threecenter_gwbse.dir/build.make xtp/src/tests/CMakeFiles/unit_test_threecenter_gwbse.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/src/tests/CMakeFiles/unit_test_grid.dir/build.make xtp/src/tests/CMakeFiles/unit_test_grid.dir/depend -Dependencies file "xtp/src/tests/CMakeFiles/unit_test_sigma_ppm.dir/test_sigma_ppm.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_sigma_ppm.dir/compiler_depend.internal". -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_vc2index.dir/DependInfo.cmake --color= +make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_sigma_ppm.dir/build'. +make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' Consolidate compiler generated dependencies of target unit_test_sigma_exact -Consolidate compiler generated dependencies of target unit_test_bse_operator -Consolidate compiler generated dependencies of target unit_test_sigma_cda +make -f xtp/src/tests/CMakeFiles/unit_test_topology.dir/build.make xtp/src/tests/CMakeFiles/unit_test_topology.dir/build make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f xtp/src/tests/CMakeFiles/unit_test_sigma_exact.dir/build.make xtp/src/tests/CMakeFiles/unit_test_sigma_exact.dir/build +Dependencies file "xtp/src/tests/CMakeFiles/unit_test_gw.dir/test_gw.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_gw.dir/compiler_depend.internal". +Dependencies file "xtp/src/tests/CMakeFiles/unit_test_davidson.dir/test_davidson.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_davidson.dir/compiler_depend.internal". make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/src/tests/CMakeFiles/unit_test_sigma_cda.dir/build.make xtp/src/tests/CMakeFiles/unit_test_sigma_cda.dir/build -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_grid.dir/DependInfo.cmake --color= -make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_threecenter_gwbse.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -Dependencies file "xtp/src/tests/CMakeFiles/unit_test_davidson.dir/test_davidson.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_davidson.dir/compiler_depend.internal". -Consolidate compiler generated dependencies of target unit_test_sigma_ppm -Dependencies file "xtp/src/tests/CMakeFiles/unit_test_vc2index.dir/test_vc2index.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_vc2index.dir/compiler_depend.internal". -Consolidate compiler generated dependencies of target unit_test_gw +Consolidate compiler generated dependencies of target unit_test_sigma_cda make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +Dependencies file "xtp/src/tests/CMakeFiles/unit_test_bse_operator.dir/test_bse_operator.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_bse_operator.dir/compiler_depend.internal". make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/src/tests/CMakeFiles/unit_test_sigma_exact.dir/build.make xtp/src/tests/CMakeFiles/unit_test_sigma_exact.dir/build make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_topology.dir/build'. -make -f xtp/src/tests/CMakeFiles/unit_test_sigma_ppm.dir/build.make xtp/src/tests/CMakeFiles/unit_test_sigma_ppm.dir/build -make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -Consolidate compiler generated dependencies of target unit_test_vc2index make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/src/tests/CMakeFiles/unit_test_gw.dir/build.make xtp/src/tests/CMakeFiles/unit_test_gw.dir/build +make -f xtp/src/tests/CMakeFiles/unit_test_sigma_cda.dir/build.make xtp/src/tests/CMakeFiles/unit_test_sigma_cda.dir/build +Dependencies file "xtp/src/tests/CMakeFiles/unit_test_trustregion.dir/test_trustregion.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_trustregion.dir/compiler_depend.internal". +Consolidate compiler generated dependencies of target unit_test_gw Consolidate compiler generated dependencies of target unit_test_davidson make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -Dependencies file "xtp/src/tests/CMakeFiles/unit_test_grid.dir/test_grid.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_grid.dir/compiler_depend.internal". -Dependencies file "xtp/src/tests/CMakeFiles/unit_test_trustregion.dir/test_trustregion.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_trustregion.dir/compiler_depend.internal". -Dependencies file "xtp/src/tests/CMakeFiles/unit_test_gnode.dir/test_gnode.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_gnode.dir/compiler_depend.internal". make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/src/tests/CMakeFiles/unit_test_bse_operator.dir/build.make xtp/src/tests/CMakeFiles/unit_test_bse_operator.dir/build +Consolidate compiler generated dependencies of target unit_test_bse_operator +make -f xtp/src/tests/CMakeFiles/unit_test_gw.dir/build.make xtp/src/tests/CMakeFiles/unit_test_gw.dir/build +make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 79%] Built target unit_test_threecenter_dft +Consolidate compiler generated dependencies of target unit_test_trustregion make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_sigma_exact.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -Consolidate compiler generated dependencies of target unit_test_grid make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f xtp/src/tests/CMakeFiles/unit_test_bse_operator.dir/build.make xtp/src/tests/CMakeFiles/unit_test_bse_operator.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_sigma_cda.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -Consolidate compiler generated dependencies of target unit_test_trustregion -Consolidate compiler generated dependencies of target unit_test_gnode make -f xtp/src/tests/CMakeFiles/unit_test_davidson.dir/build.make xtp/src/tests/CMakeFiles/unit_test_davidson.dir/build -make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_sigma_ppm.dir/build'. -make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 80%] Built target unit_test_sigma_ppm make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_gw.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/src/tests/CMakeFiles/unit_test_trustregion.dir/build.make xtp/src/tests/CMakeFiles/unit_test_trustregion.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_bse_operator.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/src/tests/CMakeFiles/unit_test_gnode.dir/build.make xtp/src/tests/CMakeFiles/unit_test_gnode.dir/build -make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_trustregion.dir/build'. -make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f xtp/src/tests/CMakeFiles/unit_test_trustregion.dir/build.make xtp/src/tests/CMakeFiles/unit_test_trustregion.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_davidson.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/src/tests/CMakeFiles/unit_test_vc2index.dir/build.make xtp/src/tests/CMakeFiles/unit_test_vc2index.dir/build -make -f xtp/src/tests/CMakeFiles/unit_test_grid.dir/build.make xtp/src/tests/CMakeFiles/unit_test_grid.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_gnode.dir/build'. +make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_trustregion.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 80%] Built target unit_test_topology +[ 80%] Built target unit_test_threecenter_gwbse +[ 82%] Built target unit_test_topology +[ 82%] Built target unit_test_sigma_exact +[ 82%] Built target unit_test_sigma_cda +[ 82%] Built target unit_test_gw +make -f xtp/src/tests/CMakeFiles/unit_test_gnode.dir/build.make xtp/src/tests/CMakeFiles/unit_test_gnode.dir/depend +[ 82%] Built target unit_test_bse_operator +[ 82%] Built target unit_test_davidson make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_vc2index.dir/build'. -make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_gnode.dir/DependInfo.cmake --color= +make -f xtp/src/tests/CMakeFiles/unit_test_vc2index.dir/build.make xtp/src/tests/CMakeFiles/unit_test_vc2index.dir/depend make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_grid.dir/build'. -make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 80%] Built target unit_test_sigma_cda -[ 80%] Built target unit_test_sigma_exact -[ 82%] Built target unit_test_sigma_ppm -[ 82%] Built target unit_test_bse_operator -[ 82%] Built target unit_test_gw -[ 82%] Built target unit_test_gnode +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_vc2index.dir/DependInfo.cmake --color= +make -f xtp/src/tests/CMakeFiles/unit_test_grid.dir/build.make xtp/src/tests/CMakeFiles/unit_test_grid.dir/depend +make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_grid.dir/DependInfo.cmake --color= make -f xtp/src/tests/CMakeFiles/unit_test_segmentmapper.dir/build.make xtp/src/tests/CMakeFiles/unit_test_segmentmapper.dir/depend [ 82%] Built target unit_test_trustregion -[ 83%] Built target unit_test_vc2index +Dependencies file "xtp/src/tests/CMakeFiles/unit_test_vc2index.dir/test_vc2index.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_vc2index.dir/compiler_depend.internal". make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_segmentmapper.dir/DependInfo.cmake --color= +Consolidate compiler generated dependencies of target unit_test_vc2index make -f xtp/src/tests/CMakeFiles/unit_test_eeinteractor.dir/build.make xtp/src/tests/CMakeFiles/unit_test_eeinteractor.dir/depend -[ 83%] Built target unit_test_davidson -[ 83%] Built target unit_test_grid -make -f xtp/src/tests/CMakeFiles/unit_test_hist.dir/build.make xtp/src/tests/CMakeFiles/unit_test_hist.dir/depend +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_segmentmapper.dir/DependInfo.cmake --color= +make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +Dependencies file "xtp/src/tests/CMakeFiles/unit_test_gnode.dir/test_gnode.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_gnode.dir/compiler_depend.internal". +make -f xtp/src/tests/CMakeFiles/unit_test_vc2index.dir/build.make xtp/src/tests/CMakeFiles/unit_test_vc2index.dir/build cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_eeinteractor.dir/DependInfo.cmake --color= +make -f xtp/src/tests/CMakeFiles/unit_test_hist.dir/build.make xtp/src/tests/CMakeFiles/unit_test_hist.dir/depend Dependencies file "xtp/src/tests/CMakeFiles/unit_test_segmentmapper.dir/test_segmentmapper.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_segmentmapper.dir/compiler_depend.internal". -make -f xtp/src/tests/CMakeFiles/unit_test_qmfragment.dir/build.make xtp/src/tests/CMakeFiles/unit_test_qmfragment.dir/depend +Dependencies file "xtp/src/tests/CMakeFiles/unit_test_grid.dir/test_grid.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_grid.dir/compiler_depend.internal". make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_hist.dir/DependInfo.cmake --color= +Consolidate compiler generated dependencies of target unit_test_gnode make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/src/tests/CMakeFiles/unit_test_jobtopology.dir/build.make xtp/src/tests/CMakeFiles/unit_test_jobtopology.dir/depend -Dependencies file "xtp/src/tests/CMakeFiles/unit_test_eeinteractor.dir/test_eeinteractor.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_eeinteractor.dir/compiler_depend.internal". -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_qmfragment.dir/DependInfo.cmake --color= +make -f xtp/src/tests/CMakeFiles/unit_test_qmfragment.dir/build.make xtp/src/tests/CMakeFiles/unit_test_qmfragment.dir/depend +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_hist.dir/DependInfo.cmake --color= +Consolidate compiler generated dependencies of target unit_test_grid +make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_vc2index.dir/build'. +make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' Consolidate compiler generated dependencies of target unit_test_segmentmapper -make -f xtp/src/tests/CMakeFiles/unit_test_dipoledipoleinteraction.dir/build.make xtp/src/tests/CMakeFiles/unit_test_dipoledipoleinteraction.dir/depend make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/src/tests/CMakeFiles/unit_test_populationanalysis.dir/build.make xtp/src/tests/CMakeFiles/unit_test_populationanalysis.dir/depend +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_qmfragment.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_dipoledipoleinteraction.dir/DependInfo.cmake --color= -make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f xtp/src/tests/CMakeFiles/unit_test_gnode.dir/build.make xtp/src/tests/CMakeFiles/unit_test_gnode.dir/build +make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +Dependencies file "xtp/src/tests/CMakeFiles/unit_test_eeinteractor.dir/test_eeinteractor.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_eeinteractor.dir/compiler_depend.internal". +make -f xtp/src/tests/CMakeFiles/unit_test_grid.dir/build.make xtp/src/tests/CMakeFiles/unit_test_grid.dir/build make -f xtp/src/tests/CMakeFiles/unit_test_segmentmapper.dir/build.make xtp/src/tests/CMakeFiles/unit_test_segmentmapper.dir/build Consolidate compiler generated dependencies of target unit_test_eeinteractor -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_jobtopology.dir/DependInfo.cmake --color= -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_populationanalysis.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/src/tests/CMakeFiles/unit_test_orca.dir/build.make xtp/src/tests/CMakeFiles/unit_test_orca.dir/depend -make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/src/tests/CMakeFiles/unit_test_eeinteractor.dir/build.make xtp/src/tests/CMakeFiles/unit_test_eeinteractor.dir/build -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_orca.dir/DependInfo.cmake --color= Dependencies file "xtp/src/tests/CMakeFiles/unit_test_hist.dir/test_hist.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_hist.dir/compiler_depend.internal". -Dependencies file "xtp/src/tests/CMakeFiles/unit_test_dipoledipoleinteraction.dir/test_dipoledipoleinteraction.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_dipoledipoleinteraction.dir/compiler_depend.internal". -Dependencies file "xtp/src/tests/CMakeFiles/unit_test_populationanalysis.dir/test_populationanalysis.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_populationanalysis.dir/compiler_depend.internal". +make -f xtp/src/tests/CMakeFiles/unit_test_eeinteractor.dir/build.make xtp/src/tests/CMakeFiles/unit_test_eeinteractor.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_segmentmapper.dir/build'. +make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_gnode.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -Consolidate compiler generated dependencies of target unit_test_dipoledipoleinteraction -Dependencies file "xtp/src/tests/CMakeFiles/unit_test_qmfragment.dir/test_qmfragment.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_qmfragment.dir/compiler_depend.internal". -make -f xtp/src/tests/CMakeFiles/unit_test_dftengine.dir/build.make xtp/src/tests/CMakeFiles/unit_test_dftengine.dir/depend +make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_grid.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -Dependencies file "xtp/src/tests/CMakeFiles/unit_test_jobtopology.dir/test_jobtopology.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_jobtopology.dir/compiler_depend.internal". -Consolidate compiler generated dependencies of target unit_test_hist +Dependencies file "xtp/src/tests/CMakeFiles/unit_test_qmfragment.dir/test_qmfragment.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_qmfragment.dir/compiler_depend.internal". make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_dftengine.dir/DependInfo.cmake --color= -make -f xtp/src/tests/CMakeFiles/unit_test_dipoledipoleinteraction.dir/build.make xtp/src/tests/CMakeFiles/unit_test_dipoledipoleinteraction.dir/build +Consolidate compiler generated dependencies of target unit_test_hist +make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_segmentmapper.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -Consolidate compiler generated dependencies of target unit_test_populationanalysis Consolidate compiler generated dependencies of target unit_test_qmfragment make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f xtp/src/tests/CMakeFiles/unit_test_hist.dir/build.make xtp/src/tests/CMakeFiles/unit_test_hist.dir/build +make -f xtp/src/tests/CMakeFiles/unit_test_qmfragment.dir/build.make xtp/src/tests/CMakeFiles/unit_test_qmfragment.dir/build +[ 83%] Built target unit_test_vc2index make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_hist.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_eeinteractor.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -Consolidate compiler generated dependencies of target unit_test_jobtopology +[ 83%] Built target unit_test_gnode +make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_qmfragment.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/src/tests/CMakeFiles/unit_test_hist.dir/build.make xtp/src/tests/CMakeFiles/unit_test_hist.dir/build -Dependencies file "xtp/src/tests/CMakeFiles/unit_test_orca.dir/test_orca.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_orca.dir/compiler_depend.internal". -make -f xtp/src/tests/CMakeFiles/unit_test_qmfragment.dir/build.make xtp/src/tests/CMakeFiles/unit_test_qmfragment.dir/build +[ 83%] Built target unit_test_grid [ 83%] Built target unit_test_segmentmapper +make -f xtp/src/tests/CMakeFiles/unit_test_jobtopology.dir/build.make xtp/src/tests/CMakeFiles/unit_test_jobtopology.dir/depend +[ 84%] Built target unit_test_eeinteractor make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_dipoledipoleinteraction.dir/build'. +make -f xtp/src/tests/CMakeFiles/unit_test_dipoledipoleinteraction.dir/build.make xtp/src/tests/CMakeFiles/unit_test_dipoledipoleinteraction.dir/depend +[ 84%] Built target unit_test_hist +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_jobtopology.dir/DependInfo.cmake --color= +make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f xtp/src/tests/CMakeFiles/unit_test_populationanalysis.dir/build.make xtp/src/tests/CMakeFiles/unit_test_populationanalysis.dir/depend +[ 86%] Built target unit_test_qmfragment +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_dipoledipoleinteraction.dir/DependInfo.cmake --color= +make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f xtp/src/tests/CMakeFiles/unit_test_orca.dir/build.make xtp/src/tests/CMakeFiles/unit_test_orca.dir/depend +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_populationanalysis.dir/DependInfo.cmake --color= +make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_orca.dir/DependInfo.cmake --color= +make -f xtp/src/tests/CMakeFiles/unit_test_dftengine.dir/build.make xtp/src/tests/CMakeFiles/unit_test_dftengine.dir/depend +Dependencies file "xtp/src/tests/CMakeFiles/unit_test_jobtopology.dir/test_jobtopology.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_jobtopology.dir/compiler_depend.internal". +make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_dftengine.dir/DependInfo.cmake --color= +make -f xtp/src/tests/CMakeFiles/unit_test_bsecoupling.dir/build.make xtp/src/tests/CMakeFiles/unit_test_bsecoupling.dir/depend +Dependencies file "xtp/src/tests/CMakeFiles/unit_test_dipoledipoleinteraction.dir/test_dipoledipoleinteraction.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_dipoledipoleinteraction.dir/compiler_depend.internal". +make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f xtp/src/tests/CMakeFiles/unit_test_rate_engine.dir/build.make xtp/src/tests/CMakeFiles/unit_test_rate_engine.dir/depend +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_bsecoupling.dir/DependInfo.cmake --color= +Consolidate compiler generated dependencies of target unit_test_jobtopology make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f xtp/src/tests/CMakeFiles/unit_test_jobtopology.dir/build.make xtp/src/tests/CMakeFiles/unit_test_jobtopology.dir/build +Dependencies file "xtp/src/tests/CMakeFiles/unit_test_populationanalysis.dir/test_populationanalysis.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_populationanalysis.dir/compiler_depend.internal". +make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_rate_engine.dir/DependInfo.cmake --color= +Dependencies file "xtp/src/tests/CMakeFiles/unit_test_orca.dir/test_orca.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_orca.dir/compiler_depend.internal". +Consolidate compiler generated dependencies of target unit_test_dipoledipoleinteraction Dependencies file "xtp/src/tests/CMakeFiles/unit_test_dftengine.dir/test_dftengine.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_dftengine.dir/compiler_depend.internal". +make -f xtp/src/tests/CMakeFiles/unit_test_DeltaQ_filter.dir/build.make xtp/src/tests/CMakeFiles/unit_test_DeltaQ_filter.dir/depend +make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +Consolidate compiler generated dependencies of target unit_test_populationanalysis make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/src/tests/CMakeFiles/unit_test_jobtopology.dir/build.make xtp/src/tests/CMakeFiles/unit_test_jobtopology.dir/build -make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_hist.dir/build'. +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_DeltaQ_filter.dir/DependInfo.cmake --color= +make -f xtp/src/tests/CMakeFiles/unit_test_dipoledipoleinteraction.dir/build.make xtp/src/tests/CMakeFiles/unit_test_dipoledipoleinteraction.dir/build +Consolidate compiler generated dependencies of target unit_test_orca make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +Dependencies file "xtp/src/tests/CMakeFiles/unit_test_bsecoupling.dir/test_bsecoupling.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_bsecoupling.dir/compiler_depend.internal". make -f xtp/src/tests/CMakeFiles/unit_test_populationanalysis.dir/build.make xtp/src/tests/CMakeFiles/unit_test_populationanalysis.dir/build -Consolidate compiler generated dependencies of target unit_test_orca Consolidate compiler generated dependencies of target unit_test_dftengine make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_jobtopology.dir/build'. +Dependencies file "xtp/src/tests/CMakeFiles/unit_test_rate_engine.dir/test_rate_engine.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_rate_engine.dir/compiler_depend.internal". make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_jobtopology.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f xtp/src/tests/CMakeFiles/unit_test_orca.dir/build.make xtp/src/tests/CMakeFiles/unit_test_orca.dir/build +Consolidate compiler generated dependencies of target unit_test_bsecoupling make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_qmfragment.dir/build'. -make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +Consolidate compiler generated dependencies of target unit_test_rate_engine +make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_dipoledipoleinteraction.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/src/tests/CMakeFiles/unit_test_orca.dir/build.make xtp/src/tests/CMakeFiles/unit_test_orca.dir/build make -f xtp/src/tests/CMakeFiles/unit_test_dftengine.dir/build.make xtp/src/tests/CMakeFiles/unit_test_dftengine.dir/build +Dependencies file "xtp/src/tests/CMakeFiles/unit_test_DeltaQ_filter.dir/test_DeltaQ_filter.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_DeltaQ_filter.dir/compiler_depend.internal". +make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_populationanalysis.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f xtp/src/tests/CMakeFiles/unit_test_bsecoupling.dir/build.make xtp/src/tests/CMakeFiles/unit_test_bsecoupling.dir/build +make -f xtp/src/tests/CMakeFiles/unit_test_rate_engine.dir/build.make xtp/src/tests/CMakeFiles/unit_test_rate_engine.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_orca.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 84%] Built target unit_test_eeinteractor +Consolidate compiler generated dependencies of target unit_test_DeltaQ_filter +make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_dftengine.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 86%] Built target unit_test_dipoledipoleinteraction -[ 86%] Built target unit_test_hist -[ 87%] Built target unit_test_qmfragment -make -f xtp/src/tests/CMakeFiles/unit_test_bsecoupling.dir/build.make xtp/src/tests/CMakeFiles/unit_test_bsecoupling.dir/depend -[ 89%] Built target unit_test_populationanalysis +make -f xtp/src/tests/CMakeFiles/unit_test_DeltaQ_filter.dir/build.make xtp/src/tests/CMakeFiles/unit_test_DeltaQ_filter.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_bsecoupling.dir/DependInfo.cmake --color= -[ 89%] Built target unit_test_jobtopology -make -f xtp/src/tests/CMakeFiles/unit_test_rate_engine.dir/build.make xtp/src/tests/CMakeFiles/unit_test_rate_engine.dir/depend -[ 89%] Built target unit_test_orca +make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_bsecoupling.dir/build'. +make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_rate_engine.dir/DependInfo.cmake --color= -make -f xtp/src/tests/CMakeFiles/unit_test_DeltaQ_filter.dir/build.make xtp/src/tests/CMakeFiles/unit_test_DeltaQ_filter.dir/depend -[ 89%] Built target unit_test_dftengine +make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_rate_engine.dir/build'. +make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 86%] Built target unit_test_jobtopology make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_DeltaQ_filter.dir/DependInfo.cmake --color= +make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_DeltaQ_filter.dir/build'. +make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 87%] Built target unit_test_dipoledipoleinteraction +[ 89%] Built target unit_test_populationanalysis +[ 89%] Built target unit_test_orca +[ 89%] Built target unit_test_dftengine make -f xtp/src/tests/CMakeFiles/unit_test_oscillatorstrength_filter.dir/build.make xtp/src/tests/CMakeFiles/unit_test_oscillatorstrength_filter.dir/depend +[ 90%] Built target unit_test_bsecoupling make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_oscillatorstrength_filter.dir/DependInfo.cmake --color= make -f xtp/src/tests/CMakeFiles/unit_test_localisation_filter.dir/build.make xtp/src/tests/CMakeFiles/unit_test_localisation_filter.dir/depend -Dependencies file "xtp/src/tests/CMakeFiles/unit_test_bsecoupling.dir/test_bsecoupling.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_bsecoupling.dir/compiler_depend.internal". +[ 90%] Built target unit_test_rate_engine +make -f xtp/src/tests/CMakeFiles/unit_test_density_filter.dir/build.make xtp/src/tests/CMakeFiles/unit_test_density_filter.dir/depend make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_localisation_filter.dir/DependInfo.cmake --color= -make -f xtp/src/tests/CMakeFiles/unit_test_density_filter.dir/build.make xtp/src/tests/CMakeFiles/unit_test_density_filter.dir/depend -Dependencies file "xtp/src/tests/CMakeFiles/unit_test_rate_engine.dir/test_rate_engine.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_rate_engine.dir/compiler_depend.internal". +[ 90%] Built target unit_test_DeltaQ_filter make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_density_filter.dir/DependInfo.cmake --color= make -f xtp/src/tests/CMakeFiles/unit_test_overlap_filter.dir/build.make xtp/src/tests/CMakeFiles/unit_test_overlap_filter.dir/depend -Dependencies file "xtp/src/tests/CMakeFiles/unit_test_DeltaQ_filter.dir/test_DeltaQ_filter.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_DeltaQ_filter.dir/compiler_depend.internal". -make -f xtp/src/tests/CMakeFiles/unit_test_newton_rapson.dir/build.make xtp/src/tests/CMakeFiles/unit_test_newton_rapson.dir/depend +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_density_filter.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_overlap_filter.dir/DependInfo.cmake --color= -Consolidate compiler generated dependencies of target unit_test_rate_engine -Consolidate compiler generated dependencies of target unit_test_bsecoupling -make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -Consolidate compiler generated dependencies of target unit_test_DeltaQ_filter -make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/src/tests/CMakeFiles/unit_test_bsecoupling.dir/build.make xtp/src/tests/CMakeFiles/unit_test_bsecoupling.dir/build +Dependencies file "xtp/src/tests/CMakeFiles/unit_test_oscillatorstrength_filter.dir/test_oscillatorstrength_filter.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_oscillatorstrength_filter.dir/compiler_depend.internal". +make -f xtp/src/tests/CMakeFiles/unit_test_newton_rapson.dir/build.make xtp/src/tests/CMakeFiles/unit_test_newton_rapson.dir/depend make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f xtp/src/tests/CMakeFiles/unit_test_indexparser.dir/build.make xtp/src/tests/CMakeFiles/unit_test_indexparser.dir/depend cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_newton_rapson.dir/DependInfo.cmake --color= Dependencies file "xtp/src/tests/CMakeFiles/unit_test_localisation_filter.dir/test_localisation_filter.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_localisation_filter.dir/compiler_depend.internal". +make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' Dependencies file "xtp/src/tests/CMakeFiles/unit_test_density_filter.dir/test_density_filter.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_density_filter.dir/compiler_depend.internal". +make -f xtp/src/tests/CMakeFiles/unit_test_orbreorder.dir/build.make xtp/src/tests/CMakeFiles/unit_test_orbreorder.dir/depend +Consolidate compiler generated dependencies of target unit_test_oscillatorstrength_filter +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_indexparser.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -Dependencies file "xtp/src/tests/CMakeFiles/unit_test_oscillatorstrength_filter.dir/test_oscillatorstrength_filter.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_oscillatorstrength_filter.dir/compiler_depend.internal". -make -f xtp/src/tests/CMakeFiles/unit_test_rate_engine.dir/build.make xtp/src/tests/CMakeFiles/unit_test_rate_engine.dir/build +Dependencies file "xtp/src/tests/CMakeFiles/unit_test_overlap_filter.dir/test_overlap_filter.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_overlap_filter.dir/compiler_depend.internal". +make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_orbreorder.dir/DependInfo.cmake --color= +make -f xtp/src/tests/CMakeFiles/unit_test_oscillatorstrength_filter.dir/build.make xtp/src/tests/CMakeFiles/unit_test_oscillatorstrength_filter.dir/build Consolidate compiler generated dependencies of target unit_test_localisation_filter Consolidate compiler generated dependencies of target unit_test_density_filter -make -f xtp/src/tests/CMakeFiles/unit_test_DeltaQ_filter.dir/build.make xtp/src/tests/CMakeFiles/unit_test_DeltaQ_filter.dir/build make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_bsecoupling.dir/build'. -make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +Dependencies file "xtp/src/tests/CMakeFiles/unit_test_newton_rapson.dir/test_newton_rapson.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_newton_rapson.dir/compiler_depend.internal". make -f xtp/src/tests/CMakeFiles/unit_test_localisation_filter.dir/build.make xtp/src/tests/CMakeFiles/unit_test_localisation_filter.dir/build -Consolidate compiler generated dependencies of target unit_test_oscillatorstrength_filter -Dependencies file "xtp/src/tests/CMakeFiles/unit_test_overlap_filter.dir/test_overlap_filter.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_overlap_filter.dir/compiler_depend.internal". -make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_rate_engine.dir/build'. +Consolidate compiler generated dependencies of target unit_test_overlap_filter +make -f xtp/src/tests/CMakeFiles/unit_test_density_filter.dir/build.make xtp/src/tests/CMakeFiles/unit_test_density_filter.dir/build make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -Dependencies file "xtp/src/tests/CMakeFiles/unit_test_newton_rapson.dir/test_newton_rapson.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_newton_rapson.dir/compiler_depend.internal". +Consolidate compiler generated dependencies of target unit_test_newton_rapson make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/src/tests/CMakeFiles/unit_test_oscillatorstrength_filter.dir/build.make xtp/src/tests/CMakeFiles/unit_test_oscillatorstrength_filter.dir/build +Dependencies file "xtp/src/tests/CMakeFiles/unit_test_orbreorder.dir/test_orbreorder.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_orbreorder.dir/compiler_depend.internal". make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_DeltaQ_filter.dir/build'. +make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_oscillatorstrength_filter.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -Consolidate compiler generated dependencies of target unit_test_newton_rapson -make -f xtp/src/tests/CMakeFiles/unit_test_density_filter.dir/build.make xtp/src/tests/CMakeFiles/unit_test_density_filter.dir/build -Consolidate compiler generated dependencies of target unit_test_overlap_filter +make -f xtp/src/tests/CMakeFiles/unit_test_overlap_filter.dir/build.make xtp/src/tests/CMakeFiles/unit_test_overlap_filter.dir/build +Dependencies file "xtp/src/tests/CMakeFiles/unit_test_indexparser.dir/test_indexparser.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_indexparser.dir/compiler_depend.internal". +Consolidate compiler generated dependencies of target unit_test_indexparser +make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make -f xtp/src/tests/CMakeFiles/unit_test_newton_rapson.dir/build.make xtp/src/tests/CMakeFiles/unit_test_newton_rapson.dir/build +make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_localisation_filter.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +Consolidate compiler generated dependencies of target unit_test_orbreorder make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_localisation_filter.dir/build'. +make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_density_filter.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/src/tests/CMakeFiles/unit_test_overlap_filter.dir/build.make xtp/src/tests/CMakeFiles/unit_test_overlap_filter.dir/build +make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f xtp/src/tests/CMakeFiles/unit_test_indexparser.dir/build.make xtp/src/tests/CMakeFiles/unit_test_indexparser.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_oscillatorstrength_filter.dir/build'. +make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_overlap_filter.dir/build'. +make -f xtp/src/tests/CMakeFiles/unit_test_orbreorder.dir/build.make xtp/src/tests/CMakeFiles/unit_test_orbreorder.dir/build make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_newton_rapson.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_density_filter.dir/build'. +make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_indexparser.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_overlap_filter.dir/build'. +make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_orbreorder.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 90%] Built target unit_test_bsecoupling -[ 90%] Built target unit_test_rate_engine +[ 90%] Built target unit_test_oscillatorstrength_filter [ 91%] Built target unit_test_localisation_filter -[ 91%] Built target unit_test_DeltaQ_filter -make -f xtp/src/tests/CMakeFiles/unit_test_indexparser.dir/build.make xtp/src/tests/CMakeFiles/unit_test_indexparser.dir/depend -[ 91%] Built target unit_test_oscillatorstrength_filter -[ 91%] Built target unit_test_density_filter -make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_indexparser.dir/DependInfo.cmake --color= -make -f xtp/src/tests/CMakeFiles/unit_test_orbreorder.dir/build.make xtp/src/tests/CMakeFiles/unit_test_orbreorder.dir/depend -[ 91%] Built target unit_test_newton_rapson [ 91%] Built target unit_test_overlap_filter +[ 91%] Built target unit_test_density_filter +[ 91%] Built target unit_test_indexparser make -f xtp/src/tests/CMakeFiles/unit_test_molden.dir/build.make xtp/src/tests/CMakeFiles/unit_test_molden.dir/depend make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_orbreorder.dir/DependInfo.cmake --color= -make -f xtp/src/tests/CMakeFiles/unit_test_gaussianwriter.dir/build.make xtp/src/tests/CMakeFiles/unit_test_gaussianwriter.dir/depend -make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_molden.dir/DependInfo.cmake --color= +[ 91%] Built target unit_test_newton_rapson +make -f xtp/src/tests/CMakeFiles/unit_test_gaussianwriter.dir/build.make xtp/src/tests/CMakeFiles/unit_test_gaussianwriter.dir/depend make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/src/tests/CMakeFiles/unit_test_incrementalfockbuilder.dir/build.make xtp/src/tests/CMakeFiles/unit_test_incrementalfockbuilder.dir/depend cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_gaussianwriter.dir/DependInfo.cmake --color= -Dependencies file "xtp/src/tests/CMakeFiles/unit_test_indexparser.dir/test_indexparser.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_indexparser.dir/compiler_depend.internal". -Dependencies file "xtp/src/tests/CMakeFiles/unit_test_orbreorder.dir/test_orbreorder.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_orbreorder.dir/compiler_depend.internal". +make -f xtp/src/tests/CMakeFiles/unit_test_incrementalfockbuilder.dir/build.make xtp/src/tests/CMakeFiles/unit_test_incrementalfockbuilder.dir/depend make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_incrementalfockbuilder.dir/DependInfo.cmake --color= -Consolidate compiler generated dependencies of target unit_test_indexparser make -f xtp/src/tests/CMakeFiles/unit_test_parallelism.dir/build.make xtp/src/tests/CMakeFiles/unit_test_parallelism.dir/depend -make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -Consolidate compiler generated dependencies of target unit_test_orbreorder -make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_incrementalfockbuilder.dir/DependInfo.cmake --color= +[ 93%] Built target unit_test_orbreorder make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/src/tests/CMakeFiles/unit_test_indexparser.dir/build.make xtp/src/tests/CMakeFiles/unit_test_indexparser.dir/build cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_parallelism.dir/DependInfo.cmake --color= -make -f xtp/src/tests/CMakeFiles/unit_test_orbreorder.dir/build.make xtp/src/tests/CMakeFiles/unit_test_orbreorder.dir/build -Dependencies file "xtp/src/tests/CMakeFiles/unit_test_incrementalfockbuilder.dir/test_incrementalfockbuilder.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_incrementalfockbuilder.dir/compiler_depend.internal". +make -f xtp/src/tests/CMakeFiles/unit_test_anderson.dir/build.make xtp/src/tests/CMakeFiles/unit_test_anderson.dir/depend +make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f xtp/src/tests/CMakeFiles/unit_test_gaussian_quadratures.dir/build.make xtp/src/tests/CMakeFiles/unit_test_gaussian_quadratures.dir/depend +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_anderson.dir/DependInfo.cmake --color= Dependencies file "xtp/src/tests/CMakeFiles/unit_test_molden.dir/test_molden.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_molden.dir/compiler_depend.internal". make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_indexparser.dir/build'. -make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -Consolidate compiler generated dependencies of target unit_test_incrementalfockbuilder +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_gaussian_quadratures.dir/DependInfo.cmake --color= Dependencies file "xtp/src/tests/CMakeFiles/unit_test_gaussianwriter.dir/test_gaussianwriter.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_gaussianwriter.dir/compiler_depend.internal". -make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/src/tests/CMakeFiles/unit_test_incrementalfockbuilder.dir/build.make xtp/src/tests/CMakeFiles/unit_test_incrementalfockbuilder.dir/build -make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_orbreorder.dir/build'. -make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -Consolidate compiler generated dependencies of target unit_test_molden -Consolidate compiler generated dependencies of target unit_test_gaussianwriter +Dependencies file "xtp/src/tests/CMakeFiles/unit_test_incrementalfockbuilder.dir/test_incrementalfockbuilder.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_incrementalfockbuilder.dir/compiler_depend.internal". Dependencies file "xtp/src/tests/CMakeFiles/unit_test_parallelism.dir/test_parallelism.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_parallelism.dir/compiler_depend.internal". -[ 91%] Built target unit_test_indexparser +Consolidate compiler generated dependencies of target unit_test_molden make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +Consolidate compiler generated dependencies of target unit_test_incrementalfockbuilder make -f xtp/src/tests/CMakeFiles/unit_test_molden.dir/build.make xtp/src/tests/CMakeFiles/unit_test_molden.dir/build +Dependencies file "xtp/src/tests/CMakeFiles/unit_test_anderson.dir/test_anderson.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_anderson.dir/compiler_depend.internal". +Consolidate compiler generated dependencies of target unit_test_gaussianwriter make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' Consolidate compiler generated dependencies of target unit_test_parallelism -make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_incrementalfockbuilder.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f xtp/src/tests/CMakeFiles/unit_test_incrementalfockbuilder.dir/build.make xtp/src/tests/CMakeFiles/unit_test_incrementalfockbuilder.dir/build +make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +Dependencies file "xtp/src/tests/CMakeFiles/unit_test_gaussian_quadratures.dir/test_gaussian_quadratures.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_gaussian_quadratures.dir/compiler_depend.internal". make -f xtp/src/tests/CMakeFiles/unit_test_gaussianwriter.dir/build.make xtp/src/tests/CMakeFiles/unit_test_gaussianwriter.dir/build -[ 93%] Built target unit_test_orbreorder +Consolidate compiler generated dependencies of target unit_test_anderson make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/src/tests/CMakeFiles/unit_test_parallelism.dir/build.make xtp/src/tests/CMakeFiles/unit_test_parallelism.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_molden.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f xtp/src/tests/CMakeFiles/unit_test_parallelism.dir/build.make xtp/src/tests/CMakeFiles/unit_test_parallelism.dir/build +Consolidate compiler generated dependencies of target unit_test_gaussian_quadratures +make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_incrementalfockbuilder.dir/build'. +make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f xtp/src/tests/CMakeFiles/unit_test_anderson.dir/build.make xtp/src/tests/CMakeFiles/unit_test_anderson.dir/build +make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_gaussianwriter.dir/build'. make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_parallelism.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f xtp/src/tests/CMakeFiles/unit_test_gaussian_quadratures.dir/build.make xtp/src/tests/CMakeFiles/unit_test_gaussian_quadratures.dir/build +make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_gaussianwriter.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/src/tests/CMakeFiles/unit_test_anderson.dir/build.make xtp/src/tests/CMakeFiles/unit_test_anderson.dir/depend -[ 94%] Built target unit_test_incrementalfockbuilder -make -f xtp/src/tests/CMakeFiles/unit_test_gaussian_quadratures.dir/build.make xtp/src/tests/CMakeFiles/unit_test_gaussian_quadratures.dir/depend make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_anderson.dir/DependInfo.cmake --color= -[ 94%] Built target unit_test_gaussianwriter +make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_anderson.dir/build'. +make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_gaussian_quadratures.dir/build'. +make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 93%] Built target unit_test_molden +[ 94%] Built target unit_test_incrementalfockbuilder +[ 95%] Built target unit_test_parallelism make -f xtp/src/tools/CMakeFiles/xtp_parallel.dir/build.make xtp/src/tools/CMakeFiles/xtp_parallel.dir/depend -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_gaussian_quadratures.dir/DependInfo.cmake --color= +[ 95%] Built target unit_test_gaussianwriter +[ 95%] Built target unit_test_anderson make -f csg/src/tools/CMakeFiles/csg_reupdate_manpage.dir/build.make csg/src/tools/CMakeFiles/csg_reupdate_manpage.dir/depend -[ 95%] Built target unit_test_parallelism -make -f csg/src/tools/CMakeFiles/csg_map_manpage.dir/build.make csg/src/tools/CMakeFiles/csg_map_manpage.dir/depend +[ 97%] Built target unit_test_gaussian_quadratures make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f csg/src/tools/CMakeFiles/csg_map_manpage.dir/build.make csg/src/tools/CMakeFiles/csg_map_manpage.dir/depend cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/CMakeFiles/csg_reupdate_manpage.dir/DependInfo.cmake --color= -[ 95%] Built target unit_test_molden -make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/CMakeFiles/csg_map_manpage.dir/DependInfo.cmake --color= -make -f csg/src/tools/CMakeFiles/csg_dump_manpage.dir/build.make csg/src/tools/CMakeFiles/csg_dump_manpage.dir/depend make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tools/CMakeFiles/xtp_parallel.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -Dependencies file "xtp/src/tests/CMakeFiles/unit_test_anderson.dir/test_anderson.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_anderson.dir/compiler_depend.internal". +make -f csg/src/tools/CMakeFiles/csg_dump_manpage.dir/build.make csg/src/tools/CMakeFiles/csg_dump_manpage.dir/depend +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/CMakeFiles/csg_map_manpage.dir/DependInfo.cmake --color= +make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make -f csg/src/tools/CMakeFiles/csg_property_manpage.dir/build.make csg/src/tools/CMakeFiles/csg_property_manpage.dir/depend cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/CMakeFiles/csg_dump_manpage.dir/DependInfo.cmake --color= -make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/src/tools/CMakeFiles/xtp_parallel.dir/build.make xtp/src/tools/CMakeFiles/xtp_parallel.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/CMakeFiles/csg_property_manpage.dir/DependInfo.cmake --color= -Dependencies file "xtp/src/tests/CMakeFiles/unit_test_gaussian_quadratures.dir/test_gaussian_quadratures.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_gaussian_quadratures.dir/compiler_depend.internal". -make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f csg/src/tools/CMakeFiles/csg_reupdate_manpage.dir/build.make csg/src/tools/CMakeFiles/csg_reupdate_manpage.dir/build -Consolidate compiler generated dependencies of target unit_test_anderson +make -f csg/src/tools/CMakeFiles/csg_resample_manpage.dir/build.make csg/src/tools/CMakeFiles/csg_resample_manpage.dir/depend make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'csg/src/tools/CMakeFiles/csg_reupdate_manpage.dir/build'. +make -f csg/src/tools/CMakeFiles/csg_map_manpage.dir/build.make csg/src/tools/CMakeFiles/csg_map_manpage.dir/build +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/CMakeFiles/csg_resample_manpage.dir/DependInfo.cmake --color= +make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/src/tests/CMakeFiles/unit_test_anderson.dir/build.make xtp/src/tests/CMakeFiles/unit_test_anderson.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'xtp/src/tools/CMakeFiles/xtp_parallel.dir/build'. +make[3]: Nothing to be done for 'csg/src/tools/CMakeFiles/csg_map_manpage.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f xtp/src/tools/CMakeFiles/xtp_parallel.dir/build.make xtp/src/tools/CMakeFiles/xtp_parallel.dir/build +make -f csg/src/tools/CMakeFiles/csg_reupdate_manpage.dir/build.make csg/src/tools/CMakeFiles/csg_reupdate_manpage.dir/build make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -Consolidate compiler generated dependencies of target unit_test_gaussian_quadratures make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f csg/src/tools/CMakeFiles/csg_map_manpage.dir/build.make csg/src/tools/CMakeFiles/csg_map_manpage.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'csg/src/tools/CMakeFiles/csg_map_manpage.dir/build'. +make[3]: Nothing to be done for 'csg/src/tools/CMakeFiles/csg_reupdate_manpage.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/src/tests/CMakeFiles/unit_test_gaussian_quadratures.dir/build.make xtp/src/tests/CMakeFiles/unit_test_gaussian_quadratures.dir/build +make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make[3]: Nothing to be done for 'xtp/src/tools/CMakeFiles/xtp_parallel.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make -f csg/src/tools/CMakeFiles/csg_dump_manpage.dir/build.make csg/src/tools/CMakeFiles/csg_dump_manpage.dir/build -make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_anderson.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'csg/src/tools/CMakeFiles/csg_dump_manpage.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make -f csg/src/tools/CMakeFiles/csg_property_manpage.dir/build.make csg/src/tools/CMakeFiles/csg_property_manpage.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_gaussian_quadratures.dir/build'. -make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'csg/src/tools/CMakeFiles/csg_property_manpage.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 95%] Built target xtp_parallel -[ 95%] Built target unit_test_anderson -[ 95%] Built target csg_reupdate_manpage -[ 95%] Built target csg_map_manpage -make -f csg/src/tools/CMakeFiles/csg_resample_manpage.dir/build.make csg/src/tools/CMakeFiles/csg_resample_manpage.dir/depend +make -f csg/src/tools/CMakeFiles/csg_resample_manpage.dir/build.make csg/src/tools/CMakeFiles/csg_resample_manpage.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make[3]: Nothing to be done for 'csg/src/tools/CMakeFiles/csg_resample_manpage.dir/build'. +make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 97%] Built target csg_map_manpage +[ 97%] Built target xtp_parallel +[ 97%] Built target csg_reupdate_manpage make -f csg/src/tools/CMakeFiles/csg_stat_manpage.dir/build.make csg/src/tools/CMakeFiles/csg_stat_manpage.dir/depend -[ 97%] Built target unit_test_gaussian_quadratures -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/CMakeFiles/csg_resample_manpage.dir/DependInfo.cmake --color= [ 97%] Built target csg_dump_manpage -make -f csg/src/tools/CMakeFiles/csg_fmatch_manpage.dir/build.make csg/src/tools/CMakeFiles/csg_fmatch_manpage.dir/depend +[ 97%] Built target csg_property_manpage make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/CMakeFiles/csg_stat_manpage.dir/DependInfo.cmake --color= +make -f csg/src/tools/CMakeFiles/csg_fmatch_manpage.dir/build.make csg/src/tools/CMakeFiles/csg_fmatch_manpage.dir/depend +[ 97%] Built target csg_resample_manpage make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/CMakeFiles/csg_fmatch_manpage.dir/DependInfo.cmake --color= make -f csg/src/tools/CMakeFiles/csg_gmxtopol_manpage.dir/build.make csg/src/tools/CMakeFiles/csg_gmxtopol_manpage.dir/depend -[ 97%] Built target csg_property_manpage +make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/CMakeFiles/csg_gmxtopol_manpage.dir/DependInfo.cmake --color= -make -f csg/src/tools/CMakeFiles/csg_dlptopol_manpage.dir/build.make csg/src/tools/CMakeFiles/csg_dlptopol_manpage.dir/depend -make -f csg/src/tools/CMakeFiles/csg_density_manpage.dir/build.make csg/src/tools/CMakeFiles/csg_density_manpage.dir/depend -make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/CMakeFiles/csg_dlptopol_manpage.dir/DependInfo.cmake --color= -make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f csg/src/tools/CMakeFiles/csg_imc_solve_manpage.dir/build.make csg/src/tools/CMakeFiles/csg_imc_solve_manpage.dir/depend -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/CMakeFiles/csg_density_manpage.dir/DependInfo.cmake --color= -make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f csg/src/csg_boltzmann/CMakeFiles/csg_boltzmann.dir/build.make csg/src/csg_boltzmann/CMakeFiles/csg_boltzmann.dir/depend +make -f csg/src/tools/CMakeFiles/csg_stat_manpage.dir/build.make csg/src/tools/CMakeFiles/csg_stat_manpage.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/CMakeFiles/csg_imc_solve_manpage.dir/DependInfo.cmake --color= +make[3]: Nothing to be done for 'csg/src/tools/CMakeFiles/csg_stat_manpage.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f csg/src/tools/CMakeFiles/csg_resample_manpage.dir/build.make csg/src/tools/CMakeFiles/csg_resample_manpage.dir/build make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f csg/src/tools/CMakeFiles/csg_fmatch_manpage.dir/build.make csg/src/tools/CMakeFiles/csg_fmatch_manpage.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'csg/src/tools/CMakeFiles/csg_resample_manpage.dir/build'. +make -f csg/src/tools/CMakeFiles/csg_dlptopol_manpage.dir/build.make csg/src/tools/CMakeFiles/csg_dlptopol_manpage.dir/depend +[ 97%] Built target csg_stat_manpage +make[3]: Nothing to be done for 'csg/src/tools/CMakeFiles/csg_fmatch_manpage.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f csg/src/tools/CMakeFiles/csg_stat_manpage.dir/build.make csg/src/tools/CMakeFiles/csg_stat_manpage.dir/build make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/CMakeFiles/csg_dlptopol_manpage.dir/DependInfo.cmake --color= make -f csg/src/tools/CMakeFiles/csg_gmxtopol_manpage.dir/build.make csg/src/tools/CMakeFiles/csg_gmxtopol_manpage.dir/build -make[3]: Nothing to be done for 'csg/src/tools/CMakeFiles/csg_stat_manpage.dir/build'. -make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/csg_boltzmann /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csg_boltzmann /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csg_boltzmann/CMakeFiles/csg_boltzmann.dir/DependInfo.cmake --color= -make -f csg/src/tools/CMakeFiles/csg_density_manpage.dir/build.make csg/src/tools/CMakeFiles/csg_density_manpage.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'csg/src/tools/CMakeFiles/csg_gmxtopol_manpage.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'csg/src/tools/CMakeFiles/csg_density_manpage.dir/build'. -make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f csg/src/tools/CMakeFiles/csg_density_manpage.dir/build.make csg/src/tools/CMakeFiles/csg_density_manpage.dir/depend make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 97%] Built target csg_fmatch_manpage +make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make -f csg/src/tools/CMakeFiles/csg_dlptopol_manpage.dir/build.make csg/src/tools/CMakeFiles/csg_dlptopol_manpage.dir/build +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/CMakeFiles/csg_density_manpage.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f csg/src/tools/CMakeFiles/csg_imc_solve_manpage.dir/build.make csg/src/tools/CMakeFiles/csg_imc_solve_manpage.dir/depend make[3]: Nothing to be done for 'csg/src/tools/CMakeFiles/csg_dlptopol_manpage.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f csg/src/tools/CMakeFiles/csg_fmatch_manpage.dir/build.make csg/src/tools/CMakeFiles/csg_fmatch_manpage.dir/build +[ 97%] Built target csg_gmxtopol_manpage make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'csg/src/tools/CMakeFiles/csg_fmatch_manpage.dir/build'. -make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 97%] Built target csg_resample_manpage +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/CMakeFiles/csg_imc_solve_manpage.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f csg/src/tools/CMakeFiles/csg_imc_solve_manpage.dir/build.make csg/src/tools/CMakeFiles/csg_imc_solve_manpage.dir/build -[ 97%] Built target csg_stat_manpage +make -f csg/src/tools/CMakeFiles/csg_density_manpage.dir/build.make csg/src/tools/CMakeFiles/csg_density_manpage.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'csg/src/tools/CMakeFiles/csg_imc_solve_manpage.dir/build'. +make[3]: Nothing to be done for 'csg/src/tools/CMakeFiles/csg_density_manpage.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 97%] Built target csg_gmxtopol_manpage +[ 97%] Built target csg_dlptopol_manpage make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f csg/src/csg_boltzmann/CMakeFiles/csg_boltzmann.dir/build.make csg/src/csg_boltzmann/CMakeFiles/csg_boltzmann.dir/build +make -f csg/src/tools/CMakeFiles/csg_imc_solve_manpage.dir/build.make csg/src/tools/CMakeFiles/csg_imc_solve_manpage.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'csg/src/csg_boltzmann/CMakeFiles/csg_boltzmann.dir/build'. +make[3]: Nothing to be done for 'csg/src/tools/CMakeFiles/csg_imc_solve_manpage.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' [ 98%] Built target csg_density_manpage -[ 98%] Built target csg_dlptopol_manpage +make -f csg/src/csg_boltzmann/CMakeFiles/csg_boltzmann.dir/build.make csg/src/csg_boltzmann/CMakeFiles/csg_boltzmann.dir/depend make -f csg/src/csgapps/CMakeFiles/fluctuations_manpage.dir/build.make csg/src/csgapps/CMakeFiles/fluctuations_manpage.dir/depend make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/csg_boltzmann /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csg_boltzmann /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csg_boltzmann/CMakeFiles/csg_boltzmann.dir/DependInfo.cmake --color= +make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/csgapps /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps/CMakeFiles/fluctuations_manpage.dir/DependInfo.cmake --color= make -f csg/src/csgapps/CMakeFiles/orientcorr_manpage.dir/build.make csg/src/csgapps/CMakeFiles/orientcorr_manpage.dir/depend -[ 98%] Built target csg_fmatch_manpage [ 98%] Built target csg_imc_solve_manpage -[ 98%] Built target csg_boltzmann -make -f csg/src/csgapps/CMakeFiles/part_dist_manpage.dir/build.make csg/src/csgapps/CMakeFiles/part_dist_manpage.dir/depend make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/csgapps /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps/CMakeFiles/orientcorr_manpage.dir/DependInfo.cmake --color= +make -f csg/src/csgapps/CMakeFiles/part_dist_manpage.dir/build.make csg/src/csgapps/CMakeFiles/part_dist_manpage.dir/depend +make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/csgapps /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps/CMakeFiles/part_dist_manpage.dir/DependInfo.cmake --color= +make -f csg/src/csg_boltzmann/CMakeFiles/csg_boltzmann.dir/build.make csg/src/csg_boltzmann/CMakeFiles/csg_boltzmann.dir/build +make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make -f csg/src/csgapps/CMakeFiles/partial_rdf_manpage.dir/build.make csg/src/csgapps/CMakeFiles/partial_rdf_manpage.dir/depend -make -f csg/src/csgapps/CMakeFiles/radii_manpage.dir/build.make csg/src/csgapps/CMakeFiles/radii_manpage.dir/depend +make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/csgapps /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps/CMakeFiles/partial_rdf_manpage.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f csg/src/csgapps/CMakeFiles/fluctuations_manpage.dir/build.make csg/src/csgapps/CMakeFiles/fluctuations_manpage.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/csgapps /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps/CMakeFiles/radii_manpage.dir/DependInfo.cmake --color= +make[3]: Nothing to be done for 'csg/src/csgapps/CMakeFiles/fluctuations_manpage.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make -f csg/src/csgapps/CMakeFiles/orientcorr_manpage.dir/build.make csg/src/csgapps/CMakeFiles/orientcorr_manpage.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'csg/src/csgapps/CMakeFiles/orientcorr_manpage.dir/build'. +make[3]: Nothing to be done for 'csg/src/csg_boltzmann/CMakeFiles/csg_boltzmann.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f csg/src/csgapps/CMakeFiles/fluctuations_manpage.dir/build.make csg/src/csgapps/CMakeFiles/fluctuations_manpage.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'csg/src/csgapps/CMakeFiles/fluctuations_manpage.dir/build'. -make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make[3]: Nothing to be done for 'csg/src/csgapps/CMakeFiles/orientcorr_manpage.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make -f csg/src/csgapps/CMakeFiles/part_dist_manpage.dir/build.make csg/src/csgapps/CMakeFiles/part_dist_manpage.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'csg/src/csgapps/CMakeFiles/part_dist_manpage.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 98%] Built target csg_boltzmann make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 98%] Built target fluctuations_manpage make -f csg/src/csgapps/CMakeFiles/partial_rdf_manpage.dir/build.make csg/src/csgapps/CMakeFiles/partial_rdf_manpage.dir/build -make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' [ 98%] Built target orientcorr_manpage make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f csg/src/csgapps/CMakeFiles/radii_manpage.dir/build.make csg/src/csgapps/CMakeFiles/radii_manpage.dir/build -make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'csg/src/csgapps/CMakeFiles/radii_manpage.dir/build'. -make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 98%] Built target fluctuations_manpage +make -f csg/src/csgapps/CMakeFiles/radii_manpage.dir/build.make csg/src/csgapps/CMakeFiles/radii_manpage.dir/depend make[3]: Nothing to be done for 'csg/src/csgapps/CMakeFiles/partial_rdf_manpage.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 98%] Built target part_dist_manpage +make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/csgapps /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps/CMakeFiles/radii_manpage.dir/DependInfo.cmake --color= make -f csg/src/csgapps/CMakeFiles/sphericalorder_manpage.dir/build.make csg/src/csgapps/CMakeFiles/sphericalorder_manpage.dir/depend +make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/csgapps /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps/CMakeFiles/sphericalorder_manpage.dir/DependInfo.cmake --color= +make -f csg/src/csgapps/CMakeFiles/radii_manpage.dir/build.make csg/src/csgapps/CMakeFiles/radii_manpage.dir/build +make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make[3]: Nothing to be done for 'csg/src/csgapps/CMakeFiles/radii_manpage.dir/build'. +make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make -f csg/src/csgapps/CMakeFiles/traj_force_manpage.dir/build.make csg/src/csgapps/CMakeFiles/traj_force_manpage.dir/depend +[ 98%] Built target partial_rdf_manpage make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/csgapps /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps/CMakeFiles/traj_force_manpage.dir/DependInfo.cmake --color= make -f xtp/src/tools/CMakeFiles/xtp_map.dir/build.make xtp/src/tools/CMakeFiles/xtp_map.dir/depend make -f xtp/src/tools/CMakeFiles/xtp_run.dir/build.make xtp/src/tools/CMakeFiles/xtp_run.dir/depend [ 98%] Built target radii_manpage -[ 98%] Built target part_dist_manpage -make -f xtp/src/tools/CMakeFiles/xtp_tools.dir/build.make xtp/src/tools/CMakeFiles/xtp_tools.dir/depend -[ 98%] Built target partial_rdf_manpage +make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/src/tools/CMakeFiles/xtp_parallel_manpage.dir/build.make xtp/src/tools/CMakeFiles/xtp_parallel_manpage.dir/depend +make -f csg/src/csgapps/CMakeFiles/sphericalorder_manpage.dir/build.make csg/src/csgapps/CMakeFiles/sphericalorder_manpage.dir/build cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tools/CMakeFiles/xtp_map.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tools/CMakeFiles/xtp_run.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tools/CMakeFiles/xtp_parallel_manpage.dir/DependInfo.cmake --color= -make -f csg/src/csg_boltzmann/CMakeFiles/csg_boltzmann_manpage.dir/build.make csg/src/csg_boltzmann/CMakeFiles/csg_boltzmann_manpage.dir/depend -make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/csg_boltzmann /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csg_boltzmann /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csg_boltzmann/CMakeFiles/csg_boltzmann_manpage.dir/DependInfo.cmake --color= -make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make[3]: Nothing to be done for 'csg/src/csgapps/CMakeFiles/sphericalorder_manpage.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tools/CMakeFiles/xtp_tools.dir/DependInfo.cmake --color= -make -f csg/src/csgapps/CMakeFiles/sphericalorder_manpage.dir/build.make csg/src/csgapps/CMakeFiles/sphericalorder_manpage.dir/build make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'csg/src/csgapps/CMakeFiles/sphericalorder_manpage.dir/build'. +make -f xtp/src/tools/CMakeFiles/xtp_tools.dir/build.make xtp/src/tools/CMakeFiles/xtp_tools.dir/depend make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make -f csg/src/csgapps/CMakeFiles/traj_force_manpage.dir/build.make csg/src/csgapps/CMakeFiles/traj_force_manpage.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'csg/src/csgapps/CMakeFiles/traj_force_manpage.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/src/tools/CMakeFiles/xtp_parallel_manpage.dir/build.make xtp/src/tools/CMakeFiles/xtp_parallel_manpage.dir/build -make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' [ 98%] Built target sphericalorder_manpage -make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'xtp/src/tools/CMakeFiles/xtp_parallel_manpage.dir/build'. -make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make -f xtp/src/tools/CMakeFiles/xtp_map.dir/build.make xtp/src/tools/CMakeFiles/xtp_map.dir/build +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tools/CMakeFiles/xtp_tools.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make -f xtp/src/tools/CMakeFiles/xtp_run.dir/build.make xtp/src/tools/CMakeFiles/xtp_run.dir/build -[ 98%] Built target traj_force_manpage -make -f xtp/src/tools/CMakeFiles/xtp_tools.dir/build.make xtp/src/tools/CMakeFiles/xtp_tools.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'xtp/src/tools/CMakeFiles/xtp_map.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f csg/src/csg_boltzmann/CMakeFiles/csg_boltzmann_manpage.dir/build.make csg/src/csg_boltzmann/CMakeFiles/csg_boltzmann_manpage.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'xtp/src/tools/CMakeFiles/xtp_run.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[ 98%] Built target traj_force_manpage +make -f xtp/src/tools/CMakeFiles/xtp_parallel_manpage.dir/build.make xtp/src/tools/CMakeFiles/xtp_parallel_manpage.dir/depend make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'xtp/src/tools/CMakeFiles/xtp_tools.dir/build'. -make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'csg/src/csg_boltzmann/CMakeFiles/csg_boltzmann_manpage.dir/build'. +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tools/CMakeFiles/xtp_parallel_manpage.dir/DependInfo.cmake --color= +[ 98%] Built target xtp_run +make -f csg/src/csg_boltzmann/CMakeFiles/csg_boltzmann_manpage.dir/build.make csg/src/csg_boltzmann/CMakeFiles/csg_boltzmann_manpage.dir/depend make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -[ 98%] Built target xtp_parallel_manpage [100%] Built target xtp_map +make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/csg/src/csg_boltzmann /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csg_boltzmann /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csg_boltzmann/CMakeFiles/csg_boltzmann_manpage.dir/DependInfo.cmake --color= +make -f xtp/src/tools/CMakeFiles/xtp_tools.dir/build.make xtp/src/tools/CMakeFiles/xtp_tools.dir/build make -f xtp/src/tools/CMakeFiles/xtp_map_manpage.dir/build.make xtp/src/tools/CMakeFiles/xtp_map_manpage.dir/depend -[100%] Built target xtp_run make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/src/tools/CMakeFiles/xtp_run_manpage.dir/build.make xtp/src/tools/CMakeFiles/xtp_run_manpage.dir/depend cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tools/CMakeFiles/xtp_map_manpage.dir/DependInfo.cmake --color= -[100%] Built target xtp_tools +make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f xtp/src/tools/CMakeFiles/xtp_run_manpage.dir/build.make xtp/src/tools/CMakeFiles/xtp_run_manpage.dir/depend make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tools/CMakeFiles/xtp_run_manpage.dir/DependInfo.cmake --color= -make -f xtp/src/tools/CMakeFiles/xtp_tools_manpage.dir/build.make xtp/src/tools/CMakeFiles/xtp_tools_manpage.dir/depend +make -f xtp/src/tools/CMakeFiles/xtp_parallel_manpage.dir/build.make xtp/src/tools/CMakeFiles/xtp_parallel_manpage.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tools/CMakeFiles/xtp_tools_manpage.dir/DependInfo.cmake --color= -[100%] Built target csg_boltzmann_manpage +make[3]: Nothing to be done for 'xtp/src/tools/CMakeFiles/xtp_tools.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make -f xtp/src/tools/CMakeFiles/xtp_run_manpage.dir/build.make xtp/src/tools/CMakeFiles/xtp_run_manpage.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'xtp/src/tools/CMakeFiles/xtp_run_manpage.dir/build'. +make[3]: Nothing to be done for 'xtp/src/tools/CMakeFiles/xtp_parallel_manpage.dir/build'. +make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f csg/src/csg_boltzmann/CMakeFiles/csg_boltzmann_manpage.dir/build.make csg/src/csg_boltzmann/CMakeFiles/csg_boltzmann_manpage.dir/build make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[100%] Built target xtp_tools +make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make -f xtp/src/tools/CMakeFiles/xtp_map_manpage.dir/build.make xtp/src/tools/CMakeFiles/xtp_map_manpage.dir/build -make -f xtp/src/tools/CMakeFiles/xtp_tools_manpage.dir/build.make xtp/src/tools/CMakeFiles/xtp_tools_manpage.dir/build +make[3]: Nothing to be done for 'csg/src/csg_boltzmann/CMakeFiles/csg_boltzmann_manpage.dir/build'. +make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'xtp/src/tools/CMakeFiles/xtp_map_manpage.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f xtp/src/tools/CMakeFiles/xtp_run_manpage.dir/build.make xtp/src/tools/CMakeFiles/xtp_run_manpage.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' -make[3]: Nothing to be done for 'xtp/src/tools/CMakeFiles/xtp_tools_manpage.dir/build'. +make[3]: Nothing to be done for 'xtp/src/tools/CMakeFiles/xtp_run_manpage.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +[100%] Built target xtp_parallel_manpage +[100%] Built target csg_boltzmann_manpage +make -f xtp/src/tools/CMakeFiles/xtp_tools_manpage.dir/build.make xtp/src/tools/CMakeFiles/xtp_tools_manpage.dir/depend [100%] Built target xtp_map_manpage +make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2022.1 /build/reproducible-path/votca-2022.1/xtp/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tools /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tools/CMakeFiles/xtp_tools_manpage.dir/DependInfo.cmake --color= [100%] Built target xtp_run_manpage +make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make -f xtp/src/tools/CMakeFiles/xtp_tools_manpage.dir/build.make xtp/src/tools/CMakeFiles/xtp_tools_manpage.dir/build +make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' +make[3]: Nothing to be done for 'xtp/src/tools/CMakeFiles/xtp_tools_manpage.dir/build'. +make[3]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' [100%] Built target xtp_tools_manpage make -f tools/CMakeFiles/manpages.dir/build.make tools/CMakeFiles/manpages.dir/depend make[3]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' @@ -28265,10 +28301,10 @@ /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/CMakeFiles 0 make[1]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' dh_auto_test - cd obj-x86_64-linux-gnu && make -j16 test ARGS\+=--verbose ARGS\+=-j16 + cd obj-x86_64-linux-gnu && make -j15 test ARGS\+=--verbose ARGS\+=-j15 make[1]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' Running tests... -/usr/bin/ctest --force-new-ctest-process --verbose -j16 +/usr/bin/ctest --force-new-ctest-process --verbose -j15 UpdateCTestConfiguration from :/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/DartConfiguration.tcl UpdateCTestConfiguration from :/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/DartConfiguration.tcl Test project /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu @@ -28368,12 +28404,6 @@ 81: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/csg_imc_solve "-r" "1000" "-i" "/build/reproducible-path/votca-2022.1/csg/src/tools/references/LJ1-LJ2/group_1.imc" "-g" "/build/reproducible-path/votca-2022.1/csg/src/tools/references/LJ1-LJ2/group_1.gmc" "-n" "/build/reproducible-path/votca-2022.1/csg/src/tools/references/LJ1-LJ2/group_1.idx" 81: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_imc_solve_reg 81: Test timeout computed to be: 10000000 -test 85 - Start 85: integration_Run_csg_stat_imc_multi - -85: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/csg_stat "--top" "/build/reproducible-path/votca-2022.1/csg/src/tools/references/LJ1-LJ2/smaller_system/topol.xml" "--trj" "/build/reproducible-path/votca-2022.1/csg/src/tools/references/LJ1-LJ2/smaller_system/traj.gro" "--do-imc" "--options" "/build/reproducible-path/votca-2022.1/csg/src/tools/references/LJ1-LJ2/smaller_system/settings_imc.xml" -85: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_stat_imc_multi -85: Test timeout computed to be: 10000000 103: :-) GROMACS - gmx grompp, 2022.5-Debian_2022.5_2 (double precision) (-: 103: 103: Executable: /usr/bin/gmx_d @@ -28418,9 +28448,9 @@ 55: 55: There were 2 notes 55: -55: GROMACS reminds you: "I can't help but think the model is ungrateful for all that nice data I gave it. Jerk." (Kate Stafford) +55: GROMACS reminds you: "If You Don't Like Cool Quotes Check Your GMXRC File" (Your Sysadmin) 55: -55: Setting the LD random seed to 1577058114 +55: Setting the LD random seed to -147685905 55: 55: Generated 1 of the 1 non-bonded parameter combinations 55: @@ -28468,9 +28498,9 @@ 123: 123: There were 3 notes 123: -123: GROMACS reminds you: "I can't help but think the model is ungrateful for all that nice data I gave it. Jerk." (Kate Stafford) +123: GROMACS reminds you: "If You Don't Like Cool Quotes Check Your GMXRC File" (Your Sysadmin) 123: -123: Setting the LD random seed to -16785447 +123: Setting the LD random seed to -18380486 123: 123: Generated 28 of the 28 non-bonded parameter combinations 123: @@ -28532,9 +28562,9 @@ 126: 126: There were 4 notes 126: -126: GROMACS reminds you: "I can't help but think the model is ungrateful for all that nice data I gave it. Jerk." (Kate Stafford) +126: GROMACS reminds you: "If You Don't Like Cool Quotes Check Your GMXRC File" (Your Sysadmin) 126: -126: Setting the LD random seed to 1877617902 +126: Setting the LD random seed to -8424449 126: 126: Generated 21 of the 21 non-bonded parameter combinations 126: @@ -28542,7 +28572,7 @@ 126: 126: Excluding 3 bonded neighbours molecule type '3-MMA' 126: -126: Setting gen_seed to -564269413 +126: Setting gen_seed to 2138373620 126: 126: Velocities were taken from a Maxwell distribution at 600 K 126: Analysing residue names: @@ -28632,79 +28662,87 @@ 67: I have 216 beads in 216 molecules for the coarsegraining 67: Reading frame, timestep 0 67: writing coarse-grained trajectory to conf_cg.gro - 1/244 Test #55: integration_Run_gmx_grompp_re ...................... Passed 0.21 sec +69: begin to calculate distribution functions +69: # of bonded interactions: 0 +69: # of non-bonded interactions: 1 +69: I have 648 beads in 216 molecules +69: I have 216 beads in 216 molecules for the coarsegraining +69: Reading frame, timestep 0 + 1/244 Test #55: integration_Run_gmx_grompp_re ...................... Passed 0.26 sec test 56 Start 56: integration_Run_csg_reupdate_gmx 56: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/csg_reupdate "--options" "/build/reproducible-path/votca-2022.1/csg/src/tools/references/spce/settings_re.xml" "--top" "topol.tpr" "--trj" "conf.gro" "--hessian-check" "no" 56: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_reupdate_gmx 56: Test timeout computed to be: 10000000 - 2/244 Test #123: integration_Run_gmx_grompp_ppy ..................... Passed 0.23 sec + 2/244 Test #123: integration_Run_gmx_grompp_ppy ..................... Passed 0.27 sec +test 85 + Start 85: integration_Run_csg_stat_imc_multi + +85: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/csg_stat "--top" "/build/reproducible-path/votca-2022.1/csg/src/tools/references/LJ1-LJ2/smaller_system/topol.xml" "--trj" "/build/reproducible-path/votca-2022.1/csg/src/tools/references/LJ1-LJ2/smaller_system/traj.gro" "--do-imc" "--options" "/build/reproducible-path/votca-2022.1/csg/src/tools/references/LJ1-LJ2/smaller_system/settings_imc.xml" +85: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_stat_imc_multi +85: Test timeout computed to be: 10000000 + 3/244 Test #126: integration_Run_gmx_grompp_mma ..................... Passed 0.26 sec test 89 Start 89: integration_Run_csg_resample_akima 89: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/csg_resample "--in" "/build/reproducible-path/votca-2022.1/csg/src/tools/references/csg_resample/table_in" "--out" "table_akima" "--type" "akima" "--grid" "0:0.1:3" 89: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_resample 89: Test timeout computed to be: 10000000 - 3/244 Test #126: integration_Run_gmx_grompp_mma ..................... Passed 0.22 sec + 4/244 Test #50: integration_Run_csg_reupdate ....................... Passed 0.27 sec test 91 Start 91: integration_Run_csg_resample_cubic 91: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/csg_resample "--in" "/build/reproducible-path/votca-2022.1/csg/src/tools/references/csg_resample/table_in" "--out" "table_cubic" "--type" "cubic" "--grid" "0:0.1:3" 91: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_resample 91: Test timeout computed to be: 10000000 - 4/244 Test #50: integration_Run_csg_reupdate ....................... Passed 0.24 sec + 5/244 Test #52: integration_Run_csg_reupdate2 ...................... Passed 0.28 sec test 93 Start 93: integration_Run_csg_resample_linear 93: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/csg_resample "--in" "/build/reproducible-path/votca-2022.1/csg/src/tools/references/csg_resample/table_in" "--out" "table_linear" "--type" "linear" "--grid" "0:0.1:3" 93: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_resample 93: Test timeout computed to be: 10000000 - 5/244 Test #52: integration_Run_csg_reupdate2 ...................... Passed 0.25 sec +103: Generating 1-4 interactions: fudge = 0.5 + 6/244 Test #59: integration_Run_csg_fmatch ......................... Passed 0.30 sec test 95 Start 95: integration_Run_csg_resample_cubicfit 95: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/csg_resample "--in" "/build/reproducible-path/votca-2022.1/csg/src/tools/references/csg_resample/table_in" "--out" "table_cubicfit" "--type" "cubic" "--grid" "0:1:9" "--fitgrid" "0:2:9" 95: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_resample 95: Test timeout computed to be: 10000000 - 6/244 Test #59: integration_Run_csg_fmatch ......................... Passed 0.26 sec + 7/244 Test #65: integration_Run_csg_map ............................ Passed 0.29 sec test 97 Start 97: integration_Run_csg_dump 97: Test command: /bin/bash "-c" "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/csg_dump --top /build/reproducible-path/votca-2022.1/csg/src/tools/references/methanol-water//topol_cg.xml > csg_dump.out" 97: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_dump 97: Test timeout computed to be: 10000000 - 7/244 Test #65: integration_Run_csg_map ............................ Passed 0.24 sec + 8/244 Test #67: integration_Run_csg_map_gro ........................ Passed 0.31 sec test 99 Start 99: integration_Run_csg_dump_gro 99: Test command: /bin/bash "-c" "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/csg_dump --top /build/reproducible-path/votca-2022.1/csg/src/tools/references/spce/3mols/conf.gro > csg_dump_gro.out" 99: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_dump_gro 99: Test timeout computed to be: 10000000 - 8/244 Test #67: integration_Run_csg_map_gro ........................ Passed 0.24 sec +69: +69: written CG-CG.dist.new +69: written CG-CG.force.new + 9/244 Test #69: integration_Run_csg_stat ........................... Passed 0.32 sec test 101 Start 101: integration_Run_csg_dump_data 101: Test command: /bin/bash "-c" "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/csg_dump --top /build/reproducible-path/votca-2022.1/csg/src/tools/references/spce/3mols_cg/spce.data > csg_dump_data.out" 101: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_dump_data 101: Test timeout computed to be: 10000000 -103: Generating 1-4 interactions: fudge = 0.5 -69: begin to calculate distribution functions -69: # of bonded interactions: 0 -69: # of non-bonded interactions: 1 -69: I have 648 beads in 216 molecules -69: I have 216 beads in 216 molecules for the coarsegraining -69: Reading frame, timestep 0 -69: -69: written CG-CG.dist.new -69: written CG-CG.force.new - 9/244 Test #69: integration_Run_csg_stat ........................... Passed 0.24 sec -test 115 - Start 115: integration_Run_csg_property - -115: Test command: /bin/bash "-c" "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/csg_property --file /build/reproducible-path/votca-2022.1/csg/src/tools/references/csg_property/csg_defaults.xml --print . --short --path cg.inverse.gromacs.DESC > csg_property.out" -115: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_property -115: Test timeout computed to be: 10000000 +72: begin to calculate distribution functions +72: # of bonded interactions: 0 +72: # of non-bonded interactions: 1 +72: I have 648 beads in 216 molecules +72: I have 216 beads in 216 molecules for the coarsegraining +72: Reading frame, timestep 0 +72: +72: written CG-CG-CG.dist.new 74: begin to calculate inverse monte carlo parameters 74: # of bonded interactions: 0 74: # of non-bonded interactions: 1 @@ -28716,37 +28754,13 @@ 74: written CG-CG.imc 74: written CG-CG.gmc 74: written CG-CG.idx - 10/244 Test #74: integration_Run_csg_stat-imc ....................... Passed 0.23 sec -test 117 - Start 117: integration_Run_csg_property2 - -117: Test command: /bin/bash "-c" "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/csg_property --file /build/reproducible-path/votca-2022.1/csg/src/tools/references/csg_property/csg_defaults.xml --print . --path cg.inverse.gromacs.DESC > csg_property.out2" -117: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_property -117: Test timeout computed to be: 10000000 -72: begin to calculate distribution functions -72: # of bonded interactions: 0 -72: # of non-bonded interactions: 1 -72: I have 648 beads in 216 molecules -72: I have 216 beads in 216 molecules for the coarsegraining -72: Reading frame, timestep 0 -85: begin to calculate inverse monte carlo parameters -85: # of bonded interactions: 0 -85: # of non-bonded interactions: 3 -85: I have 200 beads in 200 molecules -85: -85: written LJ1-LJ1.dist.new -85: written LJ1-LJ2.dist.new -85: written LJ2-LJ2.dist.new -85: written all.imc -85: written all.gmc -85: written all.idx - 11/244 Test #79: integration_Run_csg_imc_solve ...................... Passed 0.23 sec -test 119 - Start 119: integration_Run_csg_property3 + 10/244 Test #74: integration_Run_csg_stat-imc ....................... Passed 0.31 sec +test 115 + Start 115: integration_Run_csg_property -119: Test command: /bin/bash "-c" "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/csg_property --file /build/reproducible-path/votca-2022.1/csg/src/tools/references/csg_property/test.xml --path A.B.C --print . > csg_property.out3" -119: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_property -119: Test timeout computed to be: 10000000 +115: Test command: /bin/bash "-c" "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/csg_property --file /build/reproducible-path/votca-2022.1/csg/src/tools/references/csg_property/csg_defaults.xml --print . --short --path cg.inverse.gromacs.DESC > csg_property.out" +115: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_property +115: Test timeout computed to be: 10000000 56: Reading file topol.tpr, VERSION 2022.5-Debian_2022.5_2 (double precision) 56: I have 216 beads in 216 molecules 56: We have CG-CG CG potential @@ -28779,101 +28793,177 @@ 56: Artifically enforcing repulsive core. 56: 56: Finished RE update! - 12/244 Test #89: integration_Run_csg_resample_akima ................. Passed 0.18 sec +85: begin to calculate inverse monte carlo parameters +85: # of bonded interactions: 0 +85: # of non-bonded interactions: 3 +85: I have 200 beads in 200 molecules +85: +85: written LJ1-LJ1.dist.new +85: written LJ1-LJ2.dist.new +85: written LJ2-LJ2.dist.new +85: written all.imc + 11/244 Test #72: integration_Run_csg_stat_angular ................... Passed 0.36 sec +test 117 + Start 117: integration_Run_csg_property2 + +117: Test command: /bin/bash "-c" "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/csg_property --file /build/reproducible-path/votca-2022.1/csg/src/tools/references/csg_property/csg_defaults.xml --print . --path cg.inverse.gromacs.DESC > csg_property.out2" +117: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_property +117: Test timeout computed to be: 10000000 + 12/244 Test #56: integration_Run_csg_reupdate_gmx ................... Passed 0.28 sec +test 119 + Start 119: integration_Run_csg_property3 + +119: Test command: /bin/bash "-c" "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/csg_property --file /build/reproducible-path/votca-2022.1/csg/src/tools/references/csg_property/test.xml --path A.B.C --print . > csg_property.out3" +119: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_property +119: Test timeout computed to be: 10000000 + 13/244 Test #89: integration_Run_csg_resample_akima ................. Passed 0.28 sec test 121 Start 121: integration_Run_csg_property4 121: Test command: /bin/bash "-c" "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/csg_property --file /build/reproducible-path/votca-2022.1/csg/src/tools/references/csg_property/test.xml --path A.B --print C > csg_property.out4" 121: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_property 121: Test timeout computed to be: 10000000 - 13/244 Test #91: integration_Run_csg_resample_cubic ................. Passed 0.19 sec + 14/244 Test #79: integration_Run_csg_imc_solve ...................... Passed 0.39 sec test 124 Start 124: integration_Run_csg_boltzmann_ppy 124: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csg_boltzmann/csg_boltzmann "--top" "topol.tpr" "--cg" "ppy10.xml" "--excl" "excl.txt" 124: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_boltzmann_ppy 124: Test timeout computed to be: 10000000 -72: -72: written CG-CG-CG.dist.new - 14/244 Test #72: integration_Run_csg_stat_angular ................... Passed 0.32 sec + 15/244 Test #91: integration_Run_csg_resample_cubic ................. Passed 0.29 sec test 127 Start 127: integration_Run_csg_boltzmann_mma 127: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csg_boltzmann/csg_boltzmann "--top" "topol.tpr" "--cg" "mapping.xml" "--excl" "excl.txt" 127: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_boltzmann_mma 127: Test timeout computed to be: 10000000 - 15/244 Test #85: integration_Run_csg_stat_imc_multi ................. Passed 0.28 sec +85: written all.gmc +85: written all.idx +95: doing cubic fit 0:2:9 + 16/244 Test #81: integration_Run_csg_imc_solve_reg .................. Passed 0.40 sec test 1 Start 1: integration_votca_propertyHelp 1: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tools/votca_property "--help" 1: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tools 1: Test timeout computed to be: 10000000 - 16/244 Test #56: integration_Run_csg_reupdate_gmx ................... Passed 0.27 sec + 17/244 Test #85: integration_Run_csg_stat_imc_multi ................. Passed 0.35 sec test 2 Start 2: unit_test_calculator 2: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/unit_test_calculator 2: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests 2: Test timeout computed to be: 10000000 - 17/244 Test #93: integration_Run_csg_resample_linear ................ Passed 0.22 sec + 18/244 Test #93: integration_Run_csg_resample_linear ................ Passed 0.31 sec test 3 Start 3: unit_test_constants 3: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/unit_test_constants 3: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests 3: Test timeout computed to be: 10000000 - 18/244 Test #99: integration_Run_csg_dump_gro ....................... Passed 0.18 sec + 19/244 Test #95: integration_Run_csg_resample_cubicfit .............. Passed 0.27 sec test 4 Start 4: unit_test_correlate 4: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/unit_test_correlate 4: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests 4: Test timeout computed to be: 10000000 - 19/244 Test #97: integration_Run_csg_dump ........................... Passed 0.20 sec + 20/244 Test #97: integration_Run_csg_dump ........................... Passed 0.26 sec test 5 Start 5: unit_test_crosscorrelate 5: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/unit_test_crosscorrelate 5: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests 5: Test timeout computed to be: 10000000 -95: doing cubic fit 0:2:9 - 20/244 Test #95: integration_Run_csg_resample_cubicfit .............. Passed 0.24 sec + 21/244 Test #99: integration_Run_csg_dump_gro ....................... Passed 0.24 sec test 6 Start 6: unit_test_cubicspline 6: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/unit_test_cubicspline 6: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests 6: Test timeout computed to be: 10000000 - 21/244 Test #81: integration_Run_csg_imc_solve_reg .................. Passed 0.37 sec + 22/244 Test #101: integration_Run_csg_dump_data ...................... Passed 0.23 sec test 7 Start 7: unit_test_datacollection 7: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/unit_test_datacollection 7: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests 7: Test timeout computed to be: 10000000 - 22/244 Test #101: integration_Run_csg_dump_data ...................... Passed 0.22 sec + 23/244 Test #115: integration_Run_csg_property ....................... Passed 0.22 sec test 8 Start 8: unit_test_edge_base 8: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/unit_test_edge_base 8: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests 8: Test timeout computed to be: 10000000 - 23/244 Test #115: integration_Run_csg_property ....................... Passed 0.22 sec + 24/244 Test #117: integration_Run_csg_property2 ...................... Passed 0.20 sec test 9 Start 9: unit_test_edgecontainer 9: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/unit_test_edgecontainer 9: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests 9: Test timeout computed to be: 10000000 + 25/244 Test #121: integration_Run_csg_property4 ...................... Passed 0.17 sec +test 10 + Start 10: unit_test_elements + +10: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/unit_test_elements +10: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests +10: Test timeout computed to be: 10000000 + 26/244 Test #119: integration_Run_csg_property3 ...................... Passed 0.20 sec +test 11 + Start 11: unit_test_filesystem + +11: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/unit_test_filesystem +11: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests +11: Test timeout computed to be: 10000000 124: Reading file topol.tpr, VERSION 2022.5-Debian_2022.5_2 (double precision) 124: I have 82 beads in 1 molecules 124: I have 10 beads in 1 molecules for the coarsegraining 124: Writing exclusion list for atomistic molecule Protein in coarse grained representation Protein + 27/244 Test #124: integration_Run_csg_boltzmann_ppy .................. Passed 0.17 sec +test 12 + Start 12: unit_test_floatingpointcomparison + +12: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/unit_test_floatingpointcomparison +12: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests +12: Test timeout computed to be: 10000000 127: Reading file topol.tpr, VERSION 2022.5-Debian_2022.5_2 (double precision) 127: I have 53 beads in 1 molecules 127: I have 11 beads in 1 molecules for the coarsegraining 127: Writing exclusion list for atomistic molecule 3-MMA in coarse grained representation 3-MMA + 28/244 Test #127: integration_Run_csg_boltzmann_mma .................. Passed 0.17 sec +test 13 + Start 13: unit_test_graphalgorithm + +13: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/unit_test_graphalgorithm +13: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests +13: Test timeout computed to be: 10000000 +103: Number of degrees of freedom in T-Coupling group System is 15.00 +103: +103: There were 2 notes +103: +103: GROMACS reminds you: "The absence of real intelligence doesn't prove you're using AI" (Magnus Lundborg) +103: +103: Setting the LD random seed to -1149240353 +103: +103: Generated 330891 of the 330891 non-bonded parameter combinations +103: +103: Generated 330891 of the 330891 1-4 parameter combinations +103: +103: Excluding 2 bonded neighbours molecule type 'SOL' +103: Analysing residue names: +103: There are: 3 Water residues +103: +103: Determining Verlet buffer for a tolerance of 0.005 kJ/mol/ps at 300 K +103: +103: Calculated rlist for 1x1 atom pair-list as 0.900 nm, buffer size 0.000 nm +103: +103: Set rlist, assuming 4x4 atom pair-list, to 0.900 nm, buffer size 0.000 nm +103: +103: Note that mdrun will redetermine rlist based on the actual pair-list setup +103: +103: This run will generate roughly 0 Mb of data 1: ================================================== 1: ======== VOTCA (http://www.votca.org) ======== 1: ================================================== @@ -28895,487 +28985,485 @@ 1: --format arg output format [XML TXT] 1: --level arg output from this level 1: -2: Running 1 test case... -2: -2: *** No errors detected -2:  -3: Running 1 test case... -3: -3: *** No errors detected -3:  -4: Running 1 test case... -4: -4: *** No errors detected -4:  -5: Running 1 test case... -5: -5: *** No errors detected -5:  -6: Running 5 test cases... -6: -6: *** No errors detected -6:  -7: Running 6 test cases... -7: -7: *** No errors detected -7:  -8: Running 8 test cases... -8: Vertices -8: 2 3 -8: -8: -8: *** No errors detected -8:  - 24/244 Test #117: integration_Run_csg_property2 ...................... Passed 0.22 sec -test 10 - Start 10: unit_test_elements - -10: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/unit_test_elements -10: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests -10: Test timeout computed to be: 10000000 - 25/244 Test #119: integration_Run_csg_property3 ...................... Passed 0.20 sec -test 11 - Start 11: unit_test_filesystem - -11: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/unit_test_filesystem -11: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests -11: Test timeout computed to be: 10000000 - 26/244 Test #121: integration_Run_csg_property4 ...................... Passed 0.20 sec -test 12 - Start 12: unit_test_floatingpointcomparison - -12: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/unit_test_floatingpointcomparison -12: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests -12: Test timeout computed to be: 10000000 - 27/244 Test #124: integration_Run_csg_boltzmann_ppy .................. Passed 0.18 sec -test 13 - Start 13: unit_test_graphalgorithm - -13: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/unit_test_graphalgorithm -13: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests -13: Test timeout computed to be: 10000000 - 28/244 Test #127: integration_Run_csg_boltzmann_mma .................. Passed 0.17 sec + 29/244 Test #1: integration_votca_propertyHelp ..................... Passed 0.16 sec test 14 Start 14: unit_test_graph_base 14: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/unit_test_graph_base 14: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests 14: Test timeout computed to be: 10000000 - 29/244 Test #1: integration_votca_propertyHelp ..................... Passed 0.17 sec +2: Running 1 test case... +2: +2: *** No errors detected +2:  + 30/244 Test #2: unit_test_calculator ............................... Passed 0.16 sec test 15 Start 15: unit_test_graph_bf_visitor 15: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/unit_test_graph_bf_visitor 15: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests 15: Test timeout computed to be: 10000000 - 30/244 Test #2: unit_test_calculator ............................... Passed 0.17 sec +3: Running 1 test case... +3: +3: *** No errors detected +3:  + 31/244 Test #3: unit_test_constants ................................ Passed 0.15 sec test 16 Start 16: unit_test_graph_df_visitor 16: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/unit_test_graph_df_visitor 16: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests 16: Test timeout computed to be: 10000000 - 31/244 Test #3: unit_test_constants ................................ Passed 0.16 sec +4: Running 1 test case... +4: +4: *** No errors detected +4:  + 32/244 Test #4: unit_test_correlate ................................ Passed 0.15 sec test 17 Start 17: unit_test_graphdistvisitor 17: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/unit_test_graphdistvisitor 17: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests 17: Test timeout computed to be: 10000000 - 32/244 Test #4: unit_test_correlate ................................ Passed 0.15 sec +5: Running 1 test case... +5: +5: *** No errors detected +5:  + 33/244 Test #5: unit_test_crosscorrelate ........................... Passed 0.15 sec test 18 Start 18: unit_test_graphnode 18: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/unit_test_graphnode 18: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests 18: Test timeout computed to be: 10000000 - 33/244 Test #5: unit_test_crosscorrelate ........................... Passed 0.15 sec +6: Running 5 test cases... +6: +6: *** No errors detected +6:  + 34/244 Test #6: unit_test_cubicspline .............................. Passed 0.15 sec test 19 Start 19: unit_test_graphvisitor 19: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/unit_test_graphvisitor 19: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests 19: Test timeout computed to be: 10000000 - 34/244 Test #6: unit_test_cubicspline .............................. Passed 0.15 sec +7: Running 6 test cases... +7: +7: *** No errors detected +7:  + 35/244 Test #7: unit_test_datacollection ........................... Passed 0.14 sec test 20 Start 20: unit_test_histogramnew 20: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/unit_test_histogramnew 20: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests 20: Test timeout computed to be: 10000000 - 35/244 Test #7: unit_test_datacollection ........................... Passed 0.15 sec + 36/244 Test #103: integration_Run_gmx_grompp ......................... Passed 0.88 sec +test 110 + Start 110: integration_Run_gmx_mdrun + +110: Test command: /usr/bin/gmx_d "mdrun" +110: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/Run_gmx_3mols +110: Test timeout computed to be: 10000000 +8: Running 8 test cases... +8: Vertices +8: 2 3 +8: +8: +8: *** No errors detected +8:  + 37/244 Test #8: unit_test_edge_base ................................ Passed 0.15 sec +test 104 + Start 104: integration_Run_csg_dump_gmx_tpr + +104: Test command: /bin/bash "-c" "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/csg_dump --top topol.tpr > csg_dump_tpr.out" +104: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/Run_gmx_3mols +104: Test timeout computed to be: 10000000 +9: Running 10 test cases... +9: +9: *** No errors detected +9:  + 38/244 Test #9: unit_test_edgecontainer ............................ Passed 0.14 sec +test 106 + Start 106: integration_Run_csg_dump_gmx_tpr_excl + +106: Test command: /bin/bash "-c" "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/csg_dump --excl --top topol.tpr > csg_dump_tpr_excl.out" +106: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/Run_gmx_3mols +106: Test timeout computed to be: 10000000 +10: Running 2 test cases... +10: +10: *** No errors detected +10:  + 39/244 Test #10: unit_test_elements ................................. Passed 0.14 sec +test 108 + Start 108: integration_Run_csg_dump_gmx_tpr_cg + +108: Test command: /bin/bash "-c" "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/csg_dump --cg /build/reproducible-path/votca-2022.1/csg/src/tools/references/spce/3mols/../mapping.xml --top topol.tpr > csg_dump_tpr_cg.out" +108: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/Run_gmx_3mols +108: Test timeout computed to be: 10000000 +11: Running 3 test cases... +11: +11: *** No errors detected +11:  + 40/244 Test #11: unit_test_filesystem ............................... Passed 0.14 sec test 21 Start 21: unit_test_identity 21: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/unit_test_identity 21: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests 21: Test timeout computed to be: 10000000 - 36/244 Test #8: unit_test_edge_base ................................ Passed 0.15 sec +12: Running 1 test case... +12: +12: *** No errors detected +12:  + 41/244 Test #12: unit_test_floatingpointcomparison .................. Passed 0.14 sec test 22 Start 22: unit_test_linalg 22: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/unit_test_linalg 22: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests 22: Test timeout computed to be: 10000000 -9: Running 10 test cases... -9: -9: *** No errors detected -9:  - 37/244 Test #9: unit_test_edgecontainer ............................ Passed 0.15 sec +13: Running 5 test cases... +13: is single network 1 +13: EDGE CHECK ************************************** +13: +13: *** No errors detected +13:  + 42/244 Test #13: unit_test_graphalgorithm ........................... Passed 0.14 sec test 23 Start 23: unit_test_name 23: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/unit_test_name 23: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests 23: Test timeout computed to be: 10000000 -103: Number of degrees of freedom in T-Coupling group System is 15.00 -103: -103: There were 2 notes -103: -103: GROMACS reminds you: "Misslycka kan man med all kod" (Mats Nylen) -103: -103: Setting the LD random seed to -157818891 -103: -103: Generated 330891 of the 330891 non-bonded parameter combinations -103: -103: Generated 330891 of the 330891 1-4 parameter combinations -103: -103: Excluding 2 bonded neighbours molecule type 'SOL' -103: Analysing residue names: -103: There are: 3 Water residues -103: -103: Determining Verlet buffer for a tolerance of 0.005 kJ/mol/ps at 300 K -103: -103: Calculated rlist for 1x1 atom pair-list as 0.900 nm, buffer size 0.000 nm -103: -103: Set rlist, assuming 4x4 atom pair-list, to 0.900 nm, buffer size 0.000 nm -103: -103: Note that mdrun will redetermine rlist based on the actual pair-list setup -103: -103: This run will generate roughly 0 Mb of data -10: Running 2 test cases... -10: -10: *** No errors detected -10:  - 38/244 Test #10: unit_test_elements ................................. Passed 0.15 sec +14: Running 8 test cases... +14: +14: *** No errors detected +14:  + 43/244 Test #14: unit_test_graph_base ............................... Passed 0.15 sec test 24 Start 24: unit_test_objectfactory 24: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/unit_test_objectfactory 24: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests 24: Test timeout computed to be: 10000000 -11: Running 3 test cases... -11: -11: *** No errors detected -11:  - 39/244 Test #11: unit_test_filesystem ............................... Passed 0.16 sec +15: Running 3 test cases... +15: +15: *** No errors detected +15:  + 44/244 Test #15: unit_test_graph_bf_visitor ......................... Passed 0.15 sec test 25 Start 25: unit_test_optionshandler 25: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/unit_test_optionshandler 25: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests 25: Test timeout computed to be: 10000000 -12: Running 1 test case... -12: -12: *** No errors detected -12:  - 40/244 Test #12: unit_test_floatingpointcomparison .................. Passed 0.16 sec +16: Running 3 test cases... +16: +16: *** No errors detected +16:  + 45/244 Test #16: unit_test_graph_df_visitor ......................... Passed 0.17 sec test 26 Start 26: unit_test_property 26: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/unit_test_property 26: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests 26: Test timeout computed to be: 10000000 -13: Running 5 test cases... -13: is single network 1 -13: EDGE CHECK ************************************** -13: -13: *** No errors detected -13:  - 41/244 Test #13: unit_test_graphalgorithm ........................... Passed 0.16 sec +17: Running 3 test cases... +17: +17: *** No errors detected +17:  + 46/244 Test #17: unit_test_graphdistvisitor ......................... Passed 0.18 sec test 27 Start 27: unit_test_reducededge 27: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/unit_test_reducededge 27: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests 27: Test timeout computed to be: 10000000 -14: Running 8 test cases... -14: -14: *** No errors detected -14:  - 42/244 Test #14: unit_test_graph_base ............................... Passed 0.17 sec +18: Running 4 test cases... +18: +18: *** No errors detected +18:  + 47/244 Test #18: unit_test_graphnode ................................ Passed 0.19 sec test 28 Start 28: unit_test_reducedgraph 28: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/unit_test_reducedgraph 28: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests 28: Test timeout computed to be: 10000000 -15: Running 3 test cases... -15: -15: *** No errors detected -15:  - 43/244 Test #15: unit_test_graph_bf_visitor ......................... Passed 0.18 sec +19: Running 2 test cases... +19: +19: *** No errors detected +19:  + 48/244 Test #19: unit_test_graphvisitor ............................. Passed 0.19 sec test 29 Start 29: unit_test_structureparameters 29: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/unit_test_structureparameters 29: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests 29: Test timeout computed to be: 10000000 -16: Running 3 test cases... -16: -16: *** No errors detected -16:  - 44/244 Test #16: unit_test_graph_df_visitor ......................... Passed 0.18 sec +20: Running 6 test cases... +20: +20: *** No errors detected +20:  +110: :-) GROMACS - gmx mdrun, 2022.5-Debian_2022.5_2 (double precision) (-: +110: +110: Executable: /usr/bin/gmx_d +110: Data prefix: /usr +110: Working dir: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/Run_gmx_3mols +110: Command line: +110: gmx_d mdrun +110: +110: Compiled SIMD: SSE4.1, but for this host/run AVX_256 might be better (see +110: log). +110: Reading file topol.tpr, VERSION 2022.5-Debian_2022.5_2 (double precision) +110: +110: NOTE: Parallelization is limited by the small number of atoms, +110: only starting 1 thread-MPI ranks. +110: You can use the -nt and/or -ntmpi option to optimize the number of threads. +110: +110: Using 1 MPI thread +110: Using 8 OpenMP threads +110: +104: Reading file topol.tpr, VERSION 2022.5-Debian_2022.5_2 (double precision) +106: Reading file topol.tpr, VERSION 2022.5-Debian_2022.5_2 (double precision) +108: Reading file topol.tpr, VERSION 2022.5-Debian_2022.5_2 (double precision) +21: Running 2 test cases... +21: +21: *** No errors detected +21:  +22: Running 1 test case... +22: +22: *** No errors detected +22:  +23: Running 2 test cases... +23: +23: *** No errors detected +23:  +24: Running 1 test case... +24: +24: *** No errors detected +24:  +25: Running 6 test cases... +25: +25: *** No errors detected +25:  +26: Running 8 test cases... +26: +26: *** No errors detected +26:  +27: Running 10 test cases... +27: Vertices +27: 2 3 +27: +27: +27: *** No errors detected +27:  +28: Running 9 test cases... +28: 4 +28: 3 +28: 2 +28: 0 +28: +28: *** No errors detected +28:  + 49/244 Test #20: unit_test_histogramnew ............................. Passed 0.20 sec test 30 Start 30: unit_test_table 30: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/unit_test_table 30: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests 30: Test timeout computed to be: 10000000 -17: Running 3 test cases... -17: -17: *** No errors detected -17:  - 45/244 Test #17: unit_test_graphdistvisitor ......................... Passed 0.19 sec + 50/244 Test #104: integration_Run_csg_dump_gmx_tpr ................... Passed 0.20 sec test 31 Start 31: unit_test_thread 31: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/unit_test_thread 31: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests 31: Test timeout computed to be: 10000000 -18: Running 4 test cases... -18: -18: *** No errors detected -18:  - 46/244 Test #18: unit_test_graphnode ................................ Passed 0.20 sec + 51/244 Test #106: integration_Run_csg_dump_gmx_tpr_excl .............. Passed 0.22 sec test 32 Start 32: unit_test_tokenizer 32: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/unit_test_tokenizer 32: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests 32: Test timeout computed to be: 10000000 -19: Running 2 test cases... -19: -19: *** No errors detected -19:  - 47/244 Test #19: unit_test_graphvisitor ............................. Passed 0.21 sec + 52/244 Test #108: integration_Run_csg_dump_gmx_tpr_cg ................ Passed 0.22 sec test 33 Start 33: unit_test_random 33: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/unit_test_random 33: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests 33: Test timeout computed to be: 10000000 -20: Running 6 test cases... -20: -20: *** No errors detected -20:  - 48/244 Test #20: unit_test_histogramnew ............................. Passed 0.22 sec + 53/244 Test #21: unit_test_identity ................................. Passed 0.23 sec test 34 Start 34: unit_test_akimaspline 34: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/unit_test_akimaspline 34: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests 34: Test timeout computed to be: 10000000 -21: Running 2 test cases... -21: -21: *** No errors detected -21:  - 49/244 Test #21: unit_test_identity ................................. Passed 0.23 sec + 54/244 Test #22: unit_test_linalg ................................... Passed 0.24 sec test 35 Start 35: unit_test_linspline 35: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/unit_test_linspline 35: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests 35: Test timeout computed to be: 10000000 - 50/244 Test #103: integration_Run_gmx_grompp ......................... Passed 0.96 sec -test 110 - Start 110: integration_Run_gmx_mdrun - -110: Test command: /usr/bin/gmx_d "mdrun" -110: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/Run_gmx_3mols -110: Test timeout computed to be: 10000000 -22: Running 1 test case... -22: -22: *** No errors detected -22:  - 51/244 Test #22: unit_test_linalg ................................... Passed 0.23 sec -test 104 - Start 104: integration_Run_csg_dump_gmx_tpr - -104: Test command: /bin/bash "-c" "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/csg_dump --top topol.tpr > csg_dump_tpr.out" -104: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/Run_gmx_3mols -104: Test timeout computed to be: 10000000 -23: Running 2 test cases... -23: -23: *** No errors detected -23:  - 52/244 Test #23: unit_test_name ..................................... Passed 0.23 sec -test 106 - Start 106: integration_Run_csg_dump_gmx_tpr_excl - -106: Test command: /bin/bash "-c" "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/csg_dump --excl --top topol.tpr > csg_dump_tpr_excl.out" -106: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/Run_gmx_3mols -106: Test timeout computed to be: 10000000 -24: Running 1 test case... -24: -24: *** No errors detected -24:  - 53/244 Test #24: unit_test_objectfactory ............................ Passed 0.23 sec -test 108 - Start 108: integration_Run_csg_dump_gmx_tpr_cg - -108: Test command: /bin/bash "-c" "/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/csg_dump --cg /build/reproducible-path/votca-2022.1/csg/src/tools/references/spce/3mols/../mapping.xml --top topol.tpr > csg_dump_tpr_cg.out" -108: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/Run_gmx_3mols -108: Test timeout computed to be: 10000000 -25: Running 6 test cases... -25: -25: *** No errors detected -25:  - 54/244 Test #25: unit_test_optionshandler ........................... Passed 0.23 sec + 55/244 Test #23: unit_test_name ..................................... Passed 0.24 sec test 36 Start 36: unit_test_unitconverter 36: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/unit_test_unitconverter 36: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests 36: Test timeout computed to be: 10000000 -26: Running 8 test cases... -26: -26: *** No errors detected -26:  - 55/244 Test #26: unit_test_property ................................. Passed 0.24 sec + 56/244 Test #24: unit_test_objectfactory ............................ Passed 0.25 sec test 37 Start 37: unit_test_NDimVector 37: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/unit_test_NDimVector 37: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests 37: Test timeout computed to be: 10000000 -27: Running 10 test cases... -27: Vertices -27: 2 3 -27: -27: -27: *** No errors detected -27:  - 56/244 Test #27: unit_test_reducededge .............................. Passed 0.25 sec + 57/244 Test #25: unit_test_optionshandler ........................... Passed 0.25 sec test 38 Start 38: unit_test_eigenio_matrixmarket 38: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests/unit_test_eigenio_matrixmarket 38: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/src/tests 38: Test timeout computed to be: 10000000 -28: Running 9 test cases... -28: 4 -28: 3 -28: 2 -28: 0 -28: -28: *** No errors detected -28:  - 57/244 Test #28: unit_test_reducedgraph ............................. Passed 0.25 sec + 58/244 Test #26: unit_test_property ................................. Passed 0.24 sec test 39 Start 39: integration_csg_reupdateHelp 39: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/csg_reupdate "--help" 39: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools 39: Test timeout computed to be: 10000000 -29: Running 3 test cases... -29: -29: *** No errors detected -29:  - 58/244 Test #29: unit_test_structureparameters ...................... Passed 0.25 sec + 59/244 Test #27: unit_test_reducededge .............................. Passed 0.24 sec test 40 Start 40: integration_csg_mapHelp 40: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/csg_map "--help" 40: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools 40: Test timeout computed to be: 10000000 -30: Running 10 test cases... -30: -30: *** No errors detected -30:  - 59/244 Test #30: unit_test_table .................................... Passed 0.25 sec + 60/244 Test #28: unit_test_reducedgraph ............................. Passed 0.24 sec test 41 Start 41: integration_csg_dumpHelp 41: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/csg_dump "--help" 41: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools 41: Test timeout computed to be: 10000000 -31: Running 3 test cases... -31: -31: *** No errors detected -31:  - 60/244 Test #31: unit_test_thread ................................... Passed 0.24 sec +110: starting mdrun 'Flex water' +110: 1 steps, 0.0 ps. +29: Running 3 test cases... +29: +29: *** No errors detected +29:  + 61/244 Test #29: unit_test_structureparameters ...................... Passed 0.25 sec test 42 Start 42: integration_csg_propertyHelp 42: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/csg_property "--help" 42: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools 42: Test timeout computed to be: 10000000 -32: Running 5 test cases... -32: -32: *** No errors detected -32:  - 61/244 Test #32: unit_test_tokenizer ................................ Passed 0.24 sec +30: Running 10 test cases... +30: +30: *** No errors detected +30:  + 62/244 Test #30: unit_test_table .................................... Passed 0.25 sec test 43 Start 43: integration_csg_resampleHelp 43: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/csg_resample "--help" 43: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools 43: Test timeout computed to be: 10000000 -33: Running 2 test cases... -33: -33: *** No errors detected -33:  - 62/244 Test #33: unit_test_random ................................... Passed 0.23 sec +31: Running 3 test cases... +31: +31: *** No errors detected +31:  + 63/244 Test #31: unit_test_thread ................................... Passed 0.25 sec test 44 Start 44: integration_csg_statHelp 44: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/csg_stat "--help" 44: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools 44: Test timeout computed to be: 10000000 +32: Running 5 test cases... +32: +32: *** No errors detected +32:  + 64/244 Test #32: unit_test_tokenizer ................................ Passed 0.26 sec +test 45 + Start 45: integration_csg_fmatchHelp + +45: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/csg_fmatch "--help" +45: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools +45: Test timeout computed to be: 10000000 +33: Running 2 test cases... +33: +33: *** No errors detected +33:  + 65/244 Test #33: unit_test_random ................................... Passed 0.26 sec +test 46 + Start 46: integration_csg_gmxtopolHelp + +46: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/csg_gmxtopol "--help" +46: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools +46: Test timeout computed to be: 10000000 34: Running 1 test case... 34: 34: *** No errors detected 34:  + 66/244 Test #34: unit_test_akimaspline .............................. Passed 0.26 sec +test 47 + Start 47: integration_csg_dlptopolHelp + +47: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/csg_dlptopol "--help" +47: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools +47: Test timeout computed to be: 10000000 35: Running 2 test cases... 35: 35: *** No errors detected 35:  -110: :-) GROMACS - gmx mdrun, 2022.5-Debian_2022.5_2 (double precision) (-: -110: -110: Executable: /usr/bin/gmx_d -110: Data prefix: /usr -110: Working dir: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/Run_gmx_3mols -110: Command line: -110: gmx_d mdrun -110: -110: Compiled SIMD: SSE4.1, but for this host/run AVX_256 might be better (see -110: log). -110: Reading file topol.tpr, VERSION 2022.5-Debian_2022.5_2 (double precision) -110: -110: NOTE: Parallelization is limited by the small number of atoms, -110: only starting 1 thread-MPI ranks. -110: You can use the -nt and/or -ntmpi option to optimize the number of threads. -110: -110: Using 1 MPI thread -110: Using 8 OpenMP threads -110: -104: Reading file topol.tpr, VERSION 2022.5-Debian_2022.5_2 (double precision) -106: Reading file topol.tpr, VERSION 2022.5-Debian_2022.5_2 (double precision) -108: Reading file topol.tpr, VERSION 2022.5-Debian_2022.5_2 (double precision) + 67/244 Test #35: unit_test_linspline ................................ Passed 0.25 sec +test 48 + Start 48: integration_csg_densityHelp + +48: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/csg_density "--help" +48: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools +48: Test timeout computed to be: 10000000 36: Running 9 test cases... 36: 36: *** No errors detected 36:  + 68/244 Test #36: unit_test_unitconverter ............................ Passed 0.26 sec +test 49 + Start 49: integration_csg_imc_solveHelp + +49: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/csg_imc_solve "--help" +49: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools +49: Test timeout computed to be: 10000000 37: Running 1 test case... 37: 37: *** No errors detected 37:  + 69/244 Test #37: unit_test_NDimVector ............................... Passed 0.26 sec +test 51 + Start 51: integration_Compare_csg_reupdate_output + +51: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_compare "--etol" "5e-5" "-f1" "CG-CG.pot.new" "-f2" "/build/reproducible-path/votca-2022.1/csg/src/tools/references/spce/CG-CG.pot.re" +51: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_reupdate +51: Test timeout computed to be: 10000000 38: Running 4 test cases... 38: /build/reproducible-path/votca-2022.1/tools/src/tests/DataFiles 38: 38: *** No errors detected 38:  + 70/244 Test #38: unit_test_eigenio_matrixmarket ..................... Passed 0.25 sec +test 53 + Start 53: integration_Compare_csg_reupdate_output2 + +53: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_compare "--etol" "5e-5" "-f1" "CG-CG.pot.new" "-f2" "/build/reproducible-path/votca-2022.1/csg/src/tools/references/spce/CG-CG.pot.new.re" +53: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_reupdate2 +53: Test timeout computed to be: 10000000 39: ================================================== 39: ======== VOTCA (http://www.votca.org) ======== 39: ================================================== @@ -29420,71 +29508,13 @@ 39: --first-frame arg (=0) start with this frame 39: --nframes arg process the given number of frames 39: - 63/244 Test #34: unit_test_akimaspline .............................. Passed 0.23 sec -test 45 - Start 45: integration_csg_fmatchHelp - -45: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/csg_fmatch "--help" -45: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools -45: Test timeout computed to be: 10000000 - 64/244 Test #35: unit_test_linspline ................................ Passed 0.23 sec -test 46 - Start 46: integration_csg_gmxtopolHelp - -46: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/csg_gmxtopol "--help" -46: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools -46: Test timeout computed to be: 10000000 - 65/244 Test #104: integration_Run_csg_dump_gmx_tpr ................... Passed 0.23 sec -test 47 - Start 47: integration_csg_dlptopolHelp - -47: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/csg_dlptopol "--help" -47: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools -47: Test timeout computed to be: 10000000 - 66/244 Test #106: integration_Run_csg_dump_gmx_tpr_excl .............. Passed 0.23 sec -test 48 - Start 48: integration_csg_densityHelp - -48: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/csg_density "--help" -48: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools -48: Test timeout computed to be: 10000000 - 67/244 Test #108: integration_Run_csg_dump_gmx_tpr_cg ................ Passed 0.24 sec -test 49 - Start 49: integration_csg_imc_solveHelp - -49: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/csg_imc_solve "--help" -49: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools -49: Test timeout computed to be: 10000000 - 68/244 Test #36: unit_test_unitconverter ............................ Passed 0.25 sec -test 51 - Start 51: integration_Compare_csg_reupdate_output - -51: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_compare "--etol" "5e-5" "-f1" "CG-CG.pot.new" "-f2" "/build/reproducible-path/votca-2022.1/csg/src/tools/references/spce/CG-CG.pot.re" -51: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_reupdate -51: Test timeout computed to be: 10000000 - 69/244 Test #37: unit_test_NDimVector ............................... Passed 0.24 sec -test 53 - Start 53: integration_Compare_csg_reupdate_output2 - -53: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_compare "--etol" "5e-5" "-f1" "CG-CG.pot.new" "-f2" "/build/reproducible-path/votca-2022.1/csg/src/tools/references/spce/CG-CG.pot.new.re" -53: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_reupdate2 -53: Test timeout computed to be: 10000000 - 70/244 Test #38: unit_test_eigenio_matrixmarket ..................... Passed 0.24 sec + 71/244 Test #39: integration_csg_reupdateHelp ....................... Passed 0.26 sec test 54 Start 54: integration_Compare_csg_reupdate_output3 54: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_compare "--etol" "5e-5" "-f1" "CG-CG.param.new" "-f2" "/build/reproducible-path/votca-2022.1/csg/src/tools/references/spce/CG-CG.param.re" 54: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_reupdate2 54: Test timeout computed to be: 10000000 - 71/244 Test #39: integration_csg_reupdateHelp ....................... Passed 0.24 sec -test 57 - Start 57: integration_Compare_csg_reupdate_gmx_output - -57: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_compare "--etol" "5e-5" "-f1" "CG-CG.pot.new" "-f2" "/build/reproducible-path/votca-2022.1/csg/src/tools/references/spce/CG-CG.pot.new.re_gmx" -57: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_reupdate_gmx -57: Test timeout computed to be: 10000000 -110: starting mdrun 'Flex water' -110: 1 steps, 0.0 ps. 40: ================================================== 40: ======== VOTCA (http://www.votca.org) ======== 40: ================================================== @@ -29532,13 +29562,79 @@ 40: --first-frame arg (=0) start with this frame 40: --nframes arg process the given number of frames 40: - 72/244 Test #40: integration_csg_mapHelp ............................ Passed 0.26 sec + 72/244 Test #40: integration_csg_mapHelp ............................ Passed 0.28 sec +test 57 + Start 57: integration_Compare_csg_reupdate_gmx_output + +57: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_compare "--etol" "5e-5" "-f1" "CG-CG.pot.new" "-f2" "/build/reproducible-path/votca-2022.1/csg/src/tools/references/spce/CG-CG.pot.new.re_gmx" +57: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_reupdate_gmx +57: Test timeout computed to be: 10000000 +41: ================================================== +41: ======== VOTCA (http://www.votca.org) ======== +41: ================================================== +41: +41: please submit bugs to https://github.com/votca/csg/issues +41: +41: csg_dump, version 2022.1 (compiled Jan 2 2023, 20:10:30) +41: votca_tools, version 2022.1 (compiled Jan 2 2023, 20:10:30) +41: gromacs, 2022.5-Debian_2022.5_2 (double precision) +41: +41: Print atoms that are read from topology file to help debugging atom naming. +41: +41: +41: Allowed options: +41: -h [ --help ] display this help and exit +41: --verbose be loud and noisy +41: --verbose1 be very loud and noisy +41: -v [ --verbose2 ] be extremly loud and noisy +41: --top arg atomistic topology file +41: +41: Mapping options: +41: --cg arg [OPTIONAL] coarse graining mapping and bond +41: definitions +41: (xml-file). If no file is given, program acts on +41: original trajectory +41: --map-ignore arg list of molecules to ignore if mapping is done +41: separated by ; +41: +41: Specific options: +41: --excl display exclusion list instead of molecule list +41: + 73/244 Test #41: integration_csg_dumpHelp ........................... Passed 0.28 sec test 58 Start 58: integration_Compare_csg_reupdate_gmx_output2 58: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_compare "--etol" "5e-5" "-f1" "CG-CG.param.new" "-f2" "/build/reproducible-path/votca-2022.1/csg/src/tools/references/spce/CG-CG.param.re_gmx" 58: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_reupdate_gmx 58: Test timeout computed to be: 10000000 +42: ================================================== +42: ======== VOTCA (http://www.votca.org) ======== +42: ================================================== +42: +42: please submit bugs to https://github.com/votca/csg/issues +42: +42: csg_property, version 2022.1 (compiled Jan 2 2023, 20:10:30) +42: votca_tools, version 2022.1 (compiled Jan 2 2023, 20:10:30) +42: gromacs, 2022.5-Debian_2022.5_2 (double precision) +42: +42: Helper program called by inverse scripts to parse xml file. +42: +42: Allowed options: +42: --help produce this help message +42: --path arg path to part of the xml file to print +42: --filter arg list option values that match given criteria +42: --print arg (=.) specifies which children or root to print +42: --file arg xml file to parse +42: --short short version of output +42: --with-path include path of node in output +42: + 74/244 Test #42: integration_csg_propertyHelp ....................... Passed 0.27 sec +test 60 + Start 60: integration_Compare_csg_fmatch_output + +60: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_compare "--etol" "5e-5" "-f1" "CG-CG.force" "-f2" "/build/reproducible-path/votca-2022.1/csg/src/tools/references/spce/CG-CG.force.fmatch" +60: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_fmatch +60: Test timeout computed to be: 10000000 43: ================================================== 43: ======== VOTCA (http://www.votca.org) ======== 43: ================================================== @@ -29572,79 +29668,13 @@ 43: --boundaries arg (natural|periodic|derivativezero) sets boundary 43: conditions 43: - 73/244 Test #43: integration_csg_resampleHelp ....................... Passed 0.24 sec -test 60 - Start 60: integration_Compare_csg_fmatch_output - -60: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_compare "--etol" "5e-5" "-f1" "CG-CG.force" "-f2" "/build/reproducible-path/votca-2022.1/csg/src/tools/references/spce/CG-CG.force.fmatch" -60: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_fmatch -60: Test timeout computed to be: 10000000 -42: ================================================== -42: ======== VOTCA (http://www.votca.org) ======== -42: ================================================== -42: -42: please submit bugs to https://github.com/votca/csg/issues -42: -42: csg_property, version 2022.1 (compiled Jan 2 2023, 20:10:30) -42: votca_tools, version 2022.1 (compiled Jan 2 2023, 20:10:30) -42: gromacs, 2022.5-Debian_2022.5_2 (double precision) -42: -42: Helper program called by inverse scripts to parse xml file. -42: -42: Allowed options: -42: --help produce this help message -42: --path arg path to part of the xml file to print -42: --filter arg list option values that match given criteria -42: --print arg (=.) specifies which children or root to print -42: --file arg xml file to parse -42: --short short version of output -42: --with-path include path of node in output -42: - 74/244 Test #42: integration_csg_propertyHelp ....................... Passed 0.28 sec + 75/244 Test #43: integration_csg_resampleHelp ....................... Passed 0.27 sec test 66 Start 66: integration_Compare_csg_map_output 66: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_compare "--etol" "5e-5" "-f1" "frame.dump" "-f2" "/build/reproducible-path/votca-2022.1/csg/src/tools/references/spce/frame.dump" 66: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_map 66: Test timeout computed to be: 10000000 -41: ================================================== -41: ======== VOTCA (http://www.votca.org) ======== -41: ================================================== -41: -41: please submit bugs to https://github.com/votca/csg/issues -41: -41: csg_dump, version 2022.1 (compiled Jan 2 2023, 20:10:30) -41: votca_tools, version 2022.1 (compiled Jan 2 2023, 20:10:30) -41: gromacs, 2022.5-Debian_2022.5_2 (double precision) -41: -41: Print atoms that are read from topology file to help debugging atom naming. -41: -41: -41: Allowed options: -41: -h [ --help ] display this help and exit -41: --verbose be loud and noisy -41: --verbose1 be very loud and noisy -41: -v [ --verbose2 ] be extremly loud and noisy -41: --top arg atomistic topology file -41: -41: Mapping options: -41: --cg arg [OPTIONAL] coarse graining mapping and bond -41: definitions -41: (xml-file). If no file is given, program acts on -41: original trajectory -41: --map-ignore arg list of molecules to ignore if mapping is done -41: separated by ; -41: -41: Specific options: -41: --excl display exclusion list instead of molecule list -41: - 75/244 Test #41: integration_csg_dumpHelp ........................... Passed 0.31 sec -test 68 - Start 68: integration_Compare_csg_map_gro_output - -68: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_compare "--etol" "5e-5" "-f1" "conf_cg.gro" "-f2" "/build/reproducible-path/votca-2022.1/csg/src/tools/references/spce/conf_cg.gro" -68: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_map_gro -68: Test timeout computed to be: 10000000 44: ================================================== 44: ======== VOTCA (http://www.votca.org) ======== 44: ================================================== @@ -29694,13 +29724,13 @@ 44: --first-frame arg (=0) start with this frame 44: --nframes arg process the given number of frames 44: - 76/244 Test #44: integration_csg_statHelp ........................... Passed 0.29 sec -test 70 - Start 70: integration_Compare_csg_stat_output1 + 76/244 Test #44: integration_csg_statHelp ........................... Passed 0.27 sec +test 68 + Start 68: integration_Compare_csg_map_gro_output -70: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_compare "--etol" "5e-5" "-f1" "CG-CG.dist.new" "-f2" "/build/reproducible-path/votca-2022.1/csg/src/tools/references/spce/CG-CG.rdf" -70: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_stat -70: Test timeout computed to be: 10000000 +68: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_compare "--etol" "5e-5" "-f1" "conf_cg.gro" "-f2" "/build/reproducible-path/votca-2022.1/csg/src/tools/references/spce/conf_cg.gro" +68: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_map_gro +68: Test timeout computed to be: 10000000 45: ================================================== 45: ======== VOTCA (http://www.votca.org) ======== 45: ================================================== @@ -29737,13 +29767,13 @@ 45: --first-frame arg (=0) start with this frame 45: --nframes arg process the given number of frames 45: - 77/244 Test #45: integration_csg_fmatchHelp ......................... Passed 0.30 sec -test 71 - Start 71: integration_Compare_csg_stat_output2 + 77/244 Test #45: integration_csg_fmatchHelp ......................... Passed 0.27 sec +test 70 + Start 70: integration_Compare_csg_stat_output1 -71: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_compare "--etol" "5e-5" "-f1" "CG-CG.force.new" "-f2" "/build/reproducible-path/votca-2022.1/csg/src/tools/references/spce/CG-CG.pmf" -71: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_stat -71: Test timeout computed to be: 10000000 +70: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_compare "--etol" "5e-5" "-f1" "CG-CG.dist.new" "-f2" "/build/reproducible-path/votca-2022.1/csg/src/tools/references/spce/CG-CG.rdf" +70: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_stat +70: Test timeout computed to be: 10000000 46: ================================================== 46: ======== VOTCA (http://www.votca.org) ======== 46: ================================================== @@ -29773,13 +29803,13 @@ 46: --map-ignore arg list of molecules to ignore separated by ; 46: --no-map disable mapping and act on original trajectory 46: - 78/244 Test #46: integration_csg_gmxtopolHelp ....................... Passed 0.30 sec -test 73 - Start 73: integration_Compare_csg_stat_angular_output + 78/244 Test #46: integration_csg_gmxtopolHelp ....................... Passed 0.27 sec +test 71 + Start 71: integration_Compare_csg_stat_output2 -73: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_compare "--etol" "5e-5" "-f1" "CG-CG-CG.dist.new" "-f2" "/build/reproducible-path/votca-2022.1/csg/src/tools/references/spce/CG-CG-CG.angular" -73: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_stat_angular -73: Test timeout computed to be: 10000000 +71: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_compare "--etol" "5e-5" "-f1" "CG-CG.force.new" "-f2" "/build/reproducible-path/votca-2022.1/csg/src/tools/references/spce/CG-CG.pmf" +71: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_stat +71: Test timeout computed to be: 10000000 47: ================================================== 47: ======== VOTCA (http://www.votca.org) ======== 47: ================================================== @@ -29815,13 +29845,13 @@ 47: --map-ignore arg list of molecules to ignore separated by ; 47: --no-map disable mapping and act on original trajectory 47: - 79/244 Test #47: integration_csg_dlptopolHelp ....................... Passed 0.30 sec -test 75 - Start 75: integration_Compare_csg_stat-imc_output + 79/244 Test #47: integration_csg_dlptopolHelp ....................... Passed 0.27 sec +test 73 + Start 73: integration_Compare_csg_stat_angular_output -75: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_compare "--etol" "5e-5" "-f1" "CG-CG.imc" "-f2" "/build/reproducible-path/votca-2022.1/csg/src/tools/references/spce/CG-CG.imc" -75: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_stat-imc -75: Test timeout computed to be: 10000000 +73: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_compare "--etol" "5e-5" "-f1" "CG-CG-CG.dist.new" "-f2" "/build/reproducible-path/votca-2022.1/csg/src/tools/references/spce/CG-CG-CG.angular" +73: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_stat_angular +73: Test timeout computed to be: 10000000 48: ================================================== 48: ======== VOTCA (http://www.votca.org) ======== 48: ================================================== @@ -29871,13 +29901,6 @@ 48: --first-frame arg (=0) start with this frame 48: --nframes arg process the given number of frames 48: - 80/244 Test #48: integration_csg_densityHelp ........................ Passed 0.30 sec -test 76 - Start 76: integration_Compare_csg_stat-imc_output_2 - -76: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_compare "--etol" "5e-5" "-f1" "CG-CG.dist.new" "-f2" "/build/reproducible-path/votca-2022.1/csg/src/tools/references/spce/CG-CG.dist.imc" -76: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_stat-imc -76: Test timeout computed to be: 10000000 49: ================================================== 49: ======== VOTCA (http://www.votca.org) ======== 49: ================================================== @@ -29901,154 +29924,169 @@ 49: -g [ --gmcfile ] arg gmc statefile 49: -n [ --idxfile ] arg idx statefile 49: - 81/244 Test #49: integration_csg_imc_solveHelp ...................... Passed 0.30 sec +51: Comparing CG-CG.pot.new and /build/reproducible-path/votca-2022.1/csg/src/tools/references/spce/CG-CG.pot.re to a tolerance of 5e-05 +53: Comparing CG-CG.pot.new and /build/reproducible-path/votca-2022.1/csg/src/tools/references/spce/CG-CG.pot.new.re to a tolerance of 5e-05 +110: +110: Writing final coordinates. +54: Comparing CG-CG.param.new and /build/reproducible-path/votca-2022.1/csg/src/tools/references/spce/CG-CG.param.re to a tolerance of 5e-05 +57: Comparing CG-CG.pot.new and /build/reproducible-path/votca-2022.1/csg/src/tools/references/spce/CG-CG.pot.new.re_gmx to a tolerance of 5e-05 +58: Comparing CG-CG.param.new and /build/reproducible-path/votca-2022.1/csg/src/tools/references/spce/CG-CG.param.re_gmx to a tolerance of 5e-05 +60: Comparing CG-CG.force and /build/reproducible-path/votca-2022.1/csg/src/tools/references/spce/CG-CG.force.fmatch to a tolerance of 5e-05 + 80/244 Test #48: integration_csg_densityHelp ........................ Passed 0.28 sec +test 75 + Start 75: integration_Compare_csg_stat-imc_output + +75: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_compare "--etol" "5e-5" "-f1" "CG-CG.imc" "-f2" "/build/reproducible-path/votca-2022.1/csg/src/tools/references/spce/CG-CG.imc" +75: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_stat-imc +75: Test timeout computed to be: 10000000 + 81/244 Test #49: integration_csg_imc_solveHelp ...................... Passed 0.28 sec +test 76 + Start 76: integration_Compare_csg_stat-imc_output_2 + +76: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_compare "--etol" "5e-5" "-f1" "CG-CG.dist.new" "-f2" "/build/reproducible-path/votca-2022.1/csg/src/tools/references/spce/CG-CG.dist.imc" +76: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_stat-imc +76: Test timeout computed to be: 10000000 + 82/244 Test #51: integration_Compare_csg_reupdate_output ............ Passed 0.29 sec test 77 Start 77: integration_Compare_csg_stat-imc_output_3 77: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_compare "--etol" "5e-5" "-f1" "CG-CG.gmc" "-f2" "/build/reproducible-path/votca-2022.1/csg/src/tools/references/spce/CG-CG.gmc" 77: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_stat-imc 77: Test timeout computed to be: 10000000 -51: Comparing CG-CG.pot.new and /build/reproducible-path/votca-2022.1/csg/src/tools/references/spce/CG-CG.pot.re to a tolerance of 5e-05 - 82/244 Test #51: integration_Compare_csg_reupdate_output ............ Passed 0.29 sec + 83/244 Test #53: integration_Compare_csg_reupdate_output2 ........... Passed 0.28 sec test 78 Start 78: integration_Compare_csg_stat-imc_output_4 78: Test command: /usr/bin/cmake "-E" "compare_files" "CG-CG.idx" "/build/reproducible-path/votca-2022.1/csg/src/tools/references/spce/CG-CG.idx" 78: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_stat-imc 78: Test timeout computed to be: 10000000 -54: Comparing CG-CG.param.new and /build/reproducible-path/votca-2022.1/csg/src/tools/references/spce/CG-CG.param.re to a tolerance of 5e-05 - 83/244 Test #54: integration_Compare_csg_reupdate_output3 ........... Passed 0.28 sec + 84/244 Test #54: integration_Compare_csg_reupdate_output3 ........... Passed 0.27 sec test 80 Start 80: integration_Compare_csg_imc_solve_output 80: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_compare "--etol" "5e-5" "-f1" "CG-CG.dpot.imc" "-f2" "/build/reproducible-path/votca-2022.1/csg/src/tools/references/spce/imc/CG-CG.dpot.imc" 80: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_imc_solve 80: Test timeout computed to be: 10000000 -53: Comparing CG-CG.pot.new and /build/reproducible-path/votca-2022.1/csg/src/tools/references/spce/CG-CG.pot.new.re to a tolerance of 5e-05 - 84/244 Test #53: integration_Compare_csg_reupdate_output2 ........... Passed 0.31 sec + 85/244 Test #57: integration_Compare_csg_reupdate_gmx_output ........ Passed 0.27 sec test 82 Start 82: integration_Compare_csg_imc_solve_reg_output_2 82: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_compare "--etol" "5e-5" "-f1" "LJ1-LJ1.dpot.imc" "-f2" "/build/reproducible-path/votca-2022.1/csg/src/tools/references/LJ1-LJ2/LJ1-LJ1.dpot.imc" 82: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_imc_solve_reg 82: Test timeout computed to be: 10000000 -57: Comparing CG-CG.pot.new and /build/reproducible-path/votca-2022.1/csg/src/tools/references/spce/CG-CG.pot.new.re_gmx to a tolerance of 5e-05 - 85/244 Test #57: integration_Compare_csg_reupdate_gmx_output ........ Passed 0.29 sec + 86/244 Test #58: integration_Compare_csg_reupdate_gmx_output2 ....... Passed 0.26 sec test 83 Start 83: integration_Compare_csg_imc_solve_reg_output_3 83: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_compare "--etol" "5e-5" "-f1" "LJ1-LJ2.dpot.imc" "-f2" "/build/reproducible-path/votca-2022.1/csg/src/tools/references/LJ1-LJ2/LJ1-LJ2.dpot.imc" 83: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_imc_solve_reg 83: Test timeout computed to be: 10000000 -58: Comparing CG-CG.param.new and /build/reproducible-path/votca-2022.1/csg/src/tools/references/spce/CG-CG.param.re_gmx to a tolerance of 5e-05 - 86/244 Test #58: integration_Compare_csg_reupdate_gmx_output2 ....... Passed 0.27 sec -test 84 - Start 84: integration_Compare_csg_imc_solve_reg_output_4 - -84: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_compare "--etol" "5e-5" "-f1" "LJ2-LJ2.dpot.imc" "-f2" "/build/reproducible-path/votca-2022.1/csg/src/tools/references/LJ1-LJ2/LJ2-LJ2.dpot.imc" -84: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_imc_solve_reg -84: Test timeout computed to be: 10000000 -60: Comparing CG-CG.force and /build/reproducible-path/votca-2022.1/csg/src/tools/references/spce/CG-CG.force.fmatch to a tolerance of 5e-05 - 87/244 Test #60: integration_Compare_csg_fmatch_output .............. Passed 0.26 sec -test 86 - Start 86: integration_Compare_csg_stat-imc_multi_output - -86: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_compare "--etol" "5e-5" "-f1" "all.imc" "-f2" "/build/reproducible-path/votca-2022.1/csg/src/tools/references/LJ1-LJ2/smaller_system/all.imc" -86: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_stat_imc_multi -86: Test timeout computed to be: 10000000 -68: Comparing conf_cg.gro and /build/reproducible-path/votca-2022.1/csg/src/tools/references/spce/conf_cg.gro to a tolerance of 5e-05 -110: -110: Writing final coordinates. 110: -110: NOTE: 24 % of the run time was spent in pair search, +110: NOTE: 23 % of the run time was spent in pair search, 110: you might want to increase nstlist (this has no effect on accuracy) 110: 110: Core t (s) Wall t (s) (%) -110: Time: 1.887 0.236 799.7 +110: Time: 4.192 0.524 799.8 110: (ns/day) (hour/ns) -110: Performance: 1.465 16.388 +110: Performance: 0.659 36.401 110: -110: GROMACS reminds you: "We must be clear that when it comes to atoms, language can be used only as in poetry. " (Niels Bohr) +110: GROMACS reminds you: "I managed to get two hours of work done before work" (E. Lindahl) 110: -71: Comparing CG-CG.force.new and /build/reproducible-path/votca-2022.1/csg/src/tools/references/spce/CG-CG.pmf to a tolerance of 5e-05 -66: Comparing frame.dump and /build/reproducible-path/votca-2022.1/csg/src/tools/references/spce/frame.dump to a tolerance of 5e-05 -70: Comparing CG-CG.dist.new and /build/reproducible-path/votca-2022.1/csg/src/tools/references/spce/CG-CG.rdf to a tolerance of 5e-05 -77: Comparing CG-CG.gmc and /build/reproducible-path/votca-2022.1/csg/src/tools/references/spce/CG-CG.gmc to a tolerance of 5e-05 -73: Comparing CG-CG-CG.dist.new and /build/reproducible-path/votca-2022.1/csg/src/tools/references/spce/CG-CG-CG.angular to a tolerance of 5e-05 -75: Comparing CG-CG.imc and /build/reproducible-path/votca-2022.1/csg/src/tools/references/spce/CG-CG.imc to a tolerance of 5e-05 -76: Comparing CG-CG.dist.new and /build/reproducible-path/votca-2022.1/csg/src/tools/references/spce/CG-CG.dist.imc to a tolerance of 5e-05 - 88/244 Test #110: integration_Run_gmx_mdrun .......................... Passed 0.69 sec + 87/244 Test #110: integration_Run_gmx_mdrun .......................... Passed 0.95 sec test 111 Start 111: integration_Run_csg_map_gmx 111: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/csg_map "--top" "topol.tpr" "--trj" "traj.trr" "--out" "traj.gro" "--no-map" "--nframes" "1" 111: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/Run_gmx_3mols 111: Test timeout computed to be: 10000000 - 89/244 Test #66: integration_Compare_csg_map_output ................. Passed 0.27 sec + 88/244 Test #60: integration_Compare_csg_fmatch_output .............. Passed 0.28 sec test 113 Start 113: integration_Run_csg_map_gmx_xtc 113: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/csg_map "--top" "topol.tpr" "--trj" "traj_comp.xtc" "--out" "traj_comp.gro" "--no-map" "--nframes" "1" 113: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/Run_gmx_3mols 113: Test timeout computed to be: 10000000 - 90/244 Test #68: integration_Compare_csg_map_gro_output ............. Passed 0.26 sec +71: Comparing CG-CG.force.new and /build/reproducible-path/votca-2022.1/csg/src/tools/references/spce/CG-CG.pmf to a tolerance of 5e-05 + 89/244 Test #71: integration_Compare_csg_stat_output2 ............... Passed 0.19 sec +test 84 + Start 84: integration_Compare_csg_imc_solve_reg_output_4 + +84: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_compare "--etol" "5e-5" "-f1" "LJ2-LJ2.dpot.imc" "-f2" "/build/reproducible-path/votca-2022.1/csg/src/tools/references/LJ1-LJ2/LJ2-LJ2.dpot.imc" +84: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_imc_solve_reg +84: Test timeout computed to be: 10000000 +73: Comparing CG-CG-CG.dist.new and /build/reproducible-path/votca-2022.1/csg/src/tools/references/spce/CG-CG-CG.angular to a tolerance of 5e-05 + 90/244 Test #73: integration_Compare_csg_stat_angular_output ........ Passed 0.20 sec +test 86 + Start 86: integration_Compare_csg_stat-imc_multi_output + +86: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_compare "--etol" "5e-5" "-f1" "all.imc" "-f2" "/build/reproducible-path/votca-2022.1/csg/src/tools/references/LJ1-LJ2/smaller_system/all.imc" +86: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_stat_imc_multi +86: Test timeout computed to be: 10000000 +70: Comparing CG-CG.dist.new and /build/reproducible-path/votca-2022.1/csg/src/tools/references/spce/CG-CG.rdf to a tolerance of 5e-05 + 91/244 Test #70: integration_Compare_csg_stat_output1 ............... Passed 0.26 sec test 87 Start 87: integration_Compare_csg_stat-imc_multi_output_2 87: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_compare "--etol" "5e-5" "-f1" "all.gmc" "-f2" "/build/reproducible-path/votca-2022.1/csg/src/tools/references/LJ1-LJ2/smaller_system/all.gmc" 87: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_stat_imc_multi 87: Test timeout computed to be: 10000000 - 91/244 Test #70: integration_Compare_csg_stat_output1 ............... Passed 0.27 sec +66: Comparing frame.dump and /build/reproducible-path/votca-2022.1/csg/src/tools/references/spce/frame.dump to a tolerance of 5e-05 + 92/244 Test #66: integration_Compare_csg_map_output ................. Passed 0.31 sec test 88 Start 88: integration_Compare_csg_stat-imc_multi_output_3 88: Test command: /usr/bin/cmake "-E" "compare_files" "all.idx" "/build/reproducible-path/votca-2022.1/csg/src/tools/references/LJ1-LJ2/smaller_system/all.idx" 88: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_stat_imc_multi 88: Test timeout computed to be: 10000000 - 92/244 Test #71: integration_Compare_csg_stat_output2 ............... Passed 0.26 sec +77: Comparing CG-CG.gmc and /build/reproducible-path/votca-2022.1/csg/src/tools/references/spce/CG-CG.gmc to a tolerance of 5e-05 + 93/244 Test #78: integration_Compare_csg_stat-imc_output_4 .......... Passed 0.17 sec test 90 Start 90: integration_Compare_csg_resample_akima_output 90: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_compare "--etol" "5e-5" "-f1" "table_akima" "-f2" "/build/reproducible-path/votca-2022.1/csg/src/tools/references/csg_resample/table_akima" 90: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_resample 90: Test timeout computed to be: 10000000 - 93/244 Test #73: integration_Compare_csg_stat_angular_output ........ Passed 0.26 sec + 94/244 Test #77: integration_Compare_csg_stat-imc_output_3 .......... Passed 0.20 sec test 92 Start 92: integration_Compare_csg_resample_cubic_output 92: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_compare "--etol" "5e-5" "-f1" "table_cubic" "-f2" "/build/reproducible-path/votca-2022.1/csg/src/tools/references/csg_resample/table_cubic" 92: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_resample 92: Test timeout computed to be: 10000000 - 94/244 Test #75: integration_Compare_csg_stat-imc_output ............ Passed 0.26 sec +80: Comparing CG-CG.dpot.imc and /build/reproducible-path/votca-2022.1/csg/src/tools/references/spce/imc/CG-CG.dpot.imc to a tolerance of 5e-05 + 95/244 Test #80: integration_Compare_csg_imc_solve_output ........... Passed 0.19 sec test 94 Start 94: integration_Compare_csg_resample_linear_output 94: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_compare "--etol" "5e-5" "-f1" "table_linear" "-f2" "/build/reproducible-path/votca-2022.1/csg/src/tools/references/csg_resample/table_linear" 94: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_resample 94: Test timeout computed to be: 10000000 - 95/244 Test #77: integration_Compare_csg_stat-imc_output_3 .......... Passed 0.24 sec +75: Comparing CG-CG.imc and /build/reproducible-path/votca-2022.1/csg/src/tools/references/spce/CG-CG.imc to a tolerance of 5e-05 + 96/244 Test #75: integration_Compare_csg_stat-imc_output ............ Passed 0.29 sec test 96 Start 96: integration_Compare_csg_resample_cubicfit_output 96: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_compare "--etol" "5e-5" "-f1" "table_cubicfit" "-f2" "/build/reproducible-path/votca-2022.1/csg/src/tools/references/csg_resample/table_cubicfit" 96: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_resample 96: Test timeout computed to be: 10000000 - 96/244 Test #78: integration_Compare_csg_stat-imc_output_4 .......... Passed 0.24 sec +68: Comparing conf_cg.gro and /build/reproducible-path/votca-2022.1/csg/src/tools/references/spce/conf_cg.gro to a tolerance of 5e-05 + 97/244 Test #68: integration_Compare_csg_map_gro_output ............. Passed 0.38 sec test 98 Start 98: integration_Compare_csg_dump_output 98: Test command: /usr/bin/cmake "-E" "compare_files" "csg_dump.out" "/build/reproducible-path/votca-2022.1/csg/src/tools/references/methanol-water//csg_dump.out" 98: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_dump 98: Test timeout computed to be: 10000000 - 97/244 Test #76: integration_Compare_csg_stat-imc_output_2 .......... Passed 0.28 sec +82: Comparing LJ1-LJ1.dpot.imc and /build/reproducible-path/votca-2022.1/csg/src/tools/references/LJ1-LJ2/LJ1-LJ1.dpot.imc to a tolerance of 5e-05 + 98/244 Test #82: integration_Compare_csg_imc_solve_reg_output_2 ..... Passed 0.21 sec test 100 Start 100: integration_Compare_csg_dump_gro_output 100: Test command: /usr/bin/cmake "-E" "compare_files" "csg_dump_gro.out" "/build/reproducible-path/votca-2022.1/csg/src/tools/references/spce/3mols/csg_dump_gro.out" 100: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_dump_gro 100: Test timeout computed to be: 10000000 -80: Comparing CG-CG.dpot.imc and /build/reproducible-path/votca-2022.1/csg/src/tools/references/spce/imc/CG-CG.dpot.imc to a tolerance of 5e-05 - 98/244 Test #80: integration_Compare_csg_imc_solve_output ........... Passed 0.25 sec +76: Comparing CG-CG.dist.new and /build/reproducible-path/votca-2022.1/csg/src/tools/references/spce/CG-CG.dist.imc to a tolerance of 5e-05 + 99/244 Test #76: integration_Compare_csg_stat-imc_output_2 .......... Passed 0.31 sec test 102 Start 102: integration_Compare_csg_dump_data_output @@ -30056,294 +30094,199 @@ 102: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_dump_data 102: Test timeout computed to be: 10000000 83: Comparing LJ1-LJ2.dpot.imc and /build/reproducible-path/votca-2022.1/csg/src/tools/references/LJ1-LJ2/LJ1-LJ2.dpot.imc to a tolerance of 5e-05 - 99/244 Test #83: integration_Compare_csg_imc_solve_reg_output_3 ..... Passed 0.24 sec +100/244 Test #83: integration_Compare_csg_imc_solve_reg_output_3 ..... Passed 0.22 sec test 105 Start 105: integration_Compare_csg_dump_gmx_tpr_output 105: Test command: /usr/bin/cmake "-E" "compare_files" "csg_dump_tpr.out" "/build/reproducible-path/votca-2022.1/csg/src/tools/references/spce/3mols/csg_dump_tpr.out" 105: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/Run_gmx_3mols 105: Test timeout computed to be: 10000000 -84: Comparing LJ2-LJ2.dpot.imc and /build/reproducible-path/votca-2022.1/csg/src/tools/references/LJ1-LJ2/LJ2-LJ2.dpot.imc to a tolerance of 5e-05 -100/244 Test #84: integration_Compare_csg_imc_solve_reg_output_4 ..... Passed 0.25 sec +111: Reading file topol.tpr, VERSION 2022.5-Debian_2022.5_2 (double precision) +111: I have 9 beads in 3 molecules +111: trr version: GMX_trn_file (double precision) +111: Reading frame 0 time 0.000 +111: writing coarse-grained trajectory to traj.gro +101/244 Test #111: integration_Run_csg_map_gmx ........................ Passed 0.23 sec test 107 Start 107: integration_Compare_csg_dump_gmx_tpr_excl_output 107: Test command: /usr/bin/cmake "-E" "compare_files" "csg_dump_tpr_excl.out" "/build/reproducible-path/votca-2022.1/csg/src/tools/references/spce/3mols/csg_dump_tpr_excl.out" 107: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/Run_gmx_3mols 107: Test timeout computed to be: 10000000 -86: Comparing all.imc and /build/reproducible-path/votca-2022.1/csg/src/tools/references/LJ1-LJ2/smaller_system/all.imc to a tolerance of 5e-05 -101/244 Test #86: integration_Compare_csg_stat-imc_multi_output ...... Passed 0.25 sec +113: Reading file topol.tpr, VERSION 2022.5-Debian_2022.5_2 (double precision) +113: I have 9 beads in 3 molecules +113: Reading frame 0 time 0.000 +113: writing coarse-grained trajectory to traj_comp.gro +102/244 Test #113: integration_Run_csg_map_gmx_xtc .................... Passed 0.22 sec test 109 Start 109: integration_Compare_csg_dump_gmx_tpr_cg_output 109: Test command: /usr/bin/cmake "-E" "compare_files" "csg_dump_tpr_cg.out" "/build/reproducible-path/votca-2022.1/csg/src/tools/references/spce/3mols/csg_dump_tpr_cg.out" 109: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/Run_gmx_3mols 109: Test timeout computed to be: 10000000 -82: Comparing LJ1-LJ1.dpot.imc and /build/reproducible-path/votca-2022.1/csg/src/tools/references/LJ1-LJ2/LJ1-LJ1.dpot.imc to a tolerance of 5e-05 -102/244 Test #82: integration_Compare_csg_imc_solve_reg_output_2 ..... Passed 0.30 sec -test 116 - Start 116: integration_Compare_csg_property_output - -116: Test command: /usr/bin/cmake "-E" "compare_files" "csg_property.out" "/build/reproducible-path/votca-2022.1/csg/src/tools/references/csg_property/csg_property.out" -116: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_property -116: Test timeout computed to be: 10000000 -111: Reading file topol.tpr, VERSION 2022.5-Debian_2022.5_2 (double precision) -111: I have 9 beads in 3 molecules -111: trr version: GMX_trn_file (double precision) -111: Reading frame 0 time 0.000 -111: writing coarse-grained trajectory to traj.gro -103/244 Test #111: integration_Run_csg_map_gmx ........................ Passed 0.25 sec +86: Comparing all.imc and /build/reproducible-path/votca-2022.1/csg/src/tools/references/LJ1-LJ2/smaller_system/all.imc to a tolerance of 5e-05 +84: Comparing LJ2-LJ2.dpot.imc and /build/reproducible-path/votca-2022.1/csg/src/tools/references/LJ1-LJ2/LJ2-LJ2.dpot.imc to a tolerance of 5e-05 +90: Comparing table_akima and /build/reproducible-path/votca-2022.1/csg/src/tools/references/csg_resample/table_akima to a tolerance of 5e-05 +92: Comparing table_cubic and /build/reproducible-path/votca-2022.1/csg/src/tools/references/csg_resample/table_cubic to a tolerance of 5e-05 +103/244 Test #84: integration_Compare_csg_imc_solve_reg_output_4 ..... Passed 0.23 sec test 112 Start 112: integration_Compare_csg_map_gmx_output 112: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_compare "--etol" "5e-5" "-f1" "traj.gro" "-f2" "/build/reproducible-path/votca-2022.1/csg/src/tools/references/spce/3mols/conf.gro" 112: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/Run_gmx_3mols 112: Test timeout computed to be: 10000000 -113: Reading file topol.tpr, VERSION 2022.5-Debian_2022.5_2 (double precision) -113: I have 9 beads in 3 molecules -113: Reading frame 0 time 0.000 -113: writing coarse-grained trajectory to traj_comp.gro -104/244 Test #113: integration_Run_csg_map_gmx_xtc .................... Passed 0.24 sec +104/244 Test #86: integration_Compare_csg_stat-imc_multi_output ...... Passed 0.22 sec test 114 Start 114: integration_Compare_csg_map_gmx_xtc_output 114: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_compare "--etol" "5e-5" "-f1" "traj_comp.gro" "-f2" "/build/reproducible-path/votca-2022.1/csg/src/tools/references/spce/3mols/conf.gro" 114: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/Run_gmx_3mols 114: Test timeout computed to be: 10000000 -105/244 Test #88: integration_Compare_csg_stat-imc_multi_output_3 .... Passed 0.21 sec +105/244 Test #88: integration_Compare_csg_stat-imc_multi_output_3 .... Passed 0.20 sec +test 116 + Start 116: integration_Compare_csg_property_output + +116: Test command: /usr/bin/cmake "-E" "compare_files" "csg_property.out" "/build/reproducible-path/votca-2022.1/csg/src/tools/references/csg_property/csg_property.out" +116: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_property +116: Test timeout computed to be: 10000000 +106/244 Test #90: integration_Compare_csg_resample_akima_output ...... Passed 0.20 sec test 118 Start 118: integration_Compare_csg_property_output2 118: Test command: /usr/bin/cmake "-E" "compare_files" "csg_property.out2" "/build/reproducible-path/votca-2022.1/csg/src/tools/references/csg_property/csg_property.out2" 118: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_property 118: Test timeout computed to be: 10000000 -90: Comparing table_akima and /build/reproducible-path/votca-2022.1/csg/src/tools/references/csg_resample/table_akima to a tolerance of 5e-05 -106/244 Test #90: integration_Compare_csg_resample_akima_output ...... Passed 0.21 sec +107/244 Test #92: integration_Compare_csg_resample_cubic_output ...... Passed 0.20 sec test 120 Start 120: integration_Compare_csg_property_output3 120: Test command: /usr/bin/cmake "-E" "compare_files" "csg_property.out3" "/build/reproducible-path/votca-2022.1/csg/src/tools/references/csg_property/csg_property.out3" 120: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_property 120: Test timeout computed to be: 10000000 -92: Comparing table_cubic and /build/reproducible-path/votca-2022.1/csg/src/tools/references/csg_resample/table_cubic to a tolerance of 5e-05 -107/244 Test #92: integration_Compare_csg_resample_cubic_output ...... Passed 0.21 sec +108/244 Test #98: integration_Compare_csg_dump_output ................ Passed 0.16 sec test 122 Start 122: integration_Compare_csg_property_output4 122: Test command: /usr/bin/cmake "-E" "compare_files" "csg_property.out4" "/build/reproducible-path/votca-2022.1/csg/src/tools/references/csg_property/csg_property.out4" 122: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_property 122: Test timeout computed to be: 10000000 -108/244 Test #98: integration_Compare_csg_dump_output ................ Passed 0.17 sec +109/244 Test #100: integration_Compare_csg_dump_gro_output ............ Passed 0.16 sec test 125 Start 125: Compare_csg_boltzmann_output_ppy 125: Test command: /usr/bin/cmake "-E" "compare_files" "excl.txt" "/build/reproducible-path/votca-2022.1/csg/src/tools/references/ppy//excl.txt" 125: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_boltzmann_ppy 125: Test timeout computed to be: 10000000 -61: This should be a number: -0.0413191 -61: This should be a number: -0.854333 -61: -61: Block No1 done! -61: Updating file: CG-CG.force -61: Updating files: CG-CG-CG.pot and: CG-CG-CG.force -61: -61: We are done, thank you very much! -109/244 Test #61: integration_Run_csg_fmatch_3body ................... Passed 1.87 sec -test 62 - Start 62: integration_Compare_csg_fmatch_3body_output1 - -62: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_compare "--etol" "5e-5" "-f1" "CG-CG.force" "-f2" "/build/reproducible-path/votca-2022.1/csg/src/tools/references/spce/CG-CG.force.fmatch_3body" -62: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_fmatch_3body -62: Test timeout computed to be: 10000000 -94: Comparing table_linear and /build/reproducible-path/votca-2022.1/csg/src/tools/references/csg_resample/table_linear to a tolerance of 5e-05 -110/244 Test #94: integration_Compare_csg_resample_linear_output ..... Passed 0.23 sec -test 63 - Start 63: integration_Compare_csg_fmatch_3body_output2 - -63: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_compare "--etol" "5e-5" "-f1" "CG-CG-CG.force" "-f2" "/build/reproducible-path/votca-2022.1/csg/src/tools/references/spce/CG-CG-CG.force.fmatch_3body" -63: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_fmatch_3body -63: Test timeout computed to be: 10000000 -96: Comparing table_cubicfit and /build/reproducible-path/votca-2022.1/csg/src/tools/references/csg_resample/table_cubicfit to a tolerance of 5e-05 -111/244 Test #96: integration_Compare_csg_resample_cubicfit_output ... Passed 0.23 sec -test 64 - Start 64: integration_Compare_csg_fmatch_3body_output3 - -64: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_compare "--etol" "5e-5" "-f1" "CG-CG-CG.pot" "-f2" "/build/reproducible-path/votca-2022.1/csg/src/tools/references/spce/CG-CG-CG.pot.fmatch_3body" -64: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_fmatch_3body -64: Test timeout computed to be: 10000000 -87: Comparing all.gmc and /build/reproducible-path/votca-2022.1/csg/src/tools/references/LJ1-LJ2/smaller_system/all.gmc to a tolerance of 5e-05 -112/244 Test #87: integration_Compare_csg_stat-imc_multi_output_2 .... Passed 0.34 sec +110/244 Test #102: integration_Compare_csg_dump_data_output ........... Passed 0.17 sec test 128 Start 128: Compare_csg_boltzmann_output_mma 128: Test command: /usr/bin/cmake "-E" "compare_files" "excl.txt" "/build/reproducible-path/votca-2022.1/csg/src/tools/references/mma//excl.txt" 128: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_boltzmann_mma 128: Test timeout computed to be: 10000000 -113/244 Test #100: integration_Compare_csg_dump_gro_output ............ Passed 0.23 sec +111/244 Test #107: integration_Compare_csg_dump_gmx_tpr_excl_output ... Passed 0.15 sec test 129 Start 129: fluctuationsHelp 129: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps/fluctuations/csg_fluctuations "--help" 129: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps 129: Test timeout computed to be: 10000000 -114/244 Test #102: integration_Compare_csg_dump_data_output ........... Passed 0.23 sec +96: Comparing table_cubicfit and /build/reproducible-path/votca-2022.1/csg/src/tools/references/csg_resample/table_cubicfit to a tolerance of 5e-05 +112/244 Test #96: integration_Compare_csg_resample_cubicfit_output ... Passed 0.24 sec test 130 Start 130: orientcorrHelp 130: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps/orientcorr/csg_orientcorr "--help" 130: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps 130: Test timeout computed to be: 10000000 -115/244 Test #105: integration_Compare_csg_dump_gmx_tpr_output ........ Passed 0.23 sec +113/244 Test #105: integration_Compare_csg_dump_gmx_tpr_output ........ Passed 0.21 sec test 131 Start 131: part_distHelp 131: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps/part_dist/csg_part_dist "--help" 131: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps 131: Test timeout computed to be: 10000000 -116/244 Test #107: integration_Compare_csg_dump_gmx_tpr_excl_output ... Passed 0.23 sec +94: Comparing table_linear and /build/reproducible-path/votca-2022.1/csg/src/tools/references/csg_resample/table_linear to a tolerance of 5e-05 +114/244 Test #94: integration_Compare_csg_resample_linear_output ..... Passed 0.30 sec test 132 Start 132: partial_rdfHelp 132: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps/partial_rdf/csg_partial_rdf "--help" 132: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps 132: Test timeout computed to be: 10000000 -117/244 Test #109: integration_Compare_csg_dump_gmx_tpr_cg_output ..... Passed 0.21 sec +115/244 Test #109: integration_Compare_csg_dump_gmx_tpr_cg_output ..... Passed 0.22 sec test 133 Start 133: radiiHelp 133: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps/radii/csg_radii "--help" 133: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps 133: Test timeout computed to be: 10000000 -118/244 Test #116: integration_Compare_csg_property_output ............ Passed 0.22 sec +112: Comparing traj.gro and /build/reproducible-path/votca-2022.1/csg/src/tools/references/spce/3mols/conf.gro to a tolerance of 5e-05 +116/244 Test #112: integration_Compare_csg_map_gmx_output ............. Passed 0.21 sec test 134 Start 134: sphericalorderHelp 134: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps/sphericalorder/csg_sphericalorder "--help" 134: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps 134: Test timeout computed to be: 10000000 -112: Comparing traj.gro and /build/reproducible-path/votca-2022.1/csg/src/tools/references/spce/3mols/conf.gro to a tolerance of 5e-05 114: Comparing traj_comp.gro and /build/reproducible-path/votca-2022.1/csg/src/tools/references/spce/3mols/conf.gro to a tolerance of 5e-05 -62: Comparing CG-CG.force and /build/reproducible-path/votca-2022.1/csg/src/tools/references/spce/CG-CG.force.fmatch_3body to a tolerance of 5e-05 -63: Comparing CG-CG-CG.force and /build/reproducible-path/votca-2022.1/csg/src/tools/references/spce/CG-CG-CG.force.fmatch_3body to a tolerance of 5e-05 -64: Comparing CG-CG-CG.pot and /build/reproducible-path/votca-2022.1/csg/src/tools/references/spce/CG-CG-CG.pot.fmatch_3body to a tolerance of 5e-05 -130: ================================================== -130: ======== VOTCA (http://www.votca.org) ======== -130: ================================================== -130: -130: please submit bugs to https://github.com/votca/csg/issues -130: -130: orientcorr, version 2022.1 (compiled Jan 2 2023, 20:10:30) -130: votca_tools, version 2022.1 (compiled Jan 2 2023, 20:10:30) -130: gromacs, 2022.5-Debian_2022.5_2 (double precision) -130: -130: Calculates the orientational correlation function -130: <3/2*u(0)*u(r) - 1/2> -130: for a polymer melt, where u is the vector pointing along a bond and -130: r the distance between bond segments (centered on middle of bond). -130: -130: The output is correlation.dat (with intra-molecular contributions) and -130: correlation_excl.dat, where inter-molecular contributions are excluded. -130: -130: -130: Allowed options: -130: -h [ --help ] display this help and exit -130: --verbose be loud and noisy -130: --verbose1 be very loud and noisy -130: -v [ --verbose2 ] be extremly loud and noisy -130: --top arg atomistic topology file -130: -130: Neighbor search options: -130: -c [ --cutoff ] arg (=1) cutoff for the neighbor search -130: --nbins arg (=40) number of bins for the grid -130: --nbmethod arg (=grid) neighbor search algorithm (simple or grid) -130: -130: Threading options: -130: --nt arg (=1) number of threads -130: -130: Trajectory options: -130: --trj arg atomistic trajectory file -130: --begin arg (=0) skip frames before this time (only works for -130: Gromacs files) -130: --first-frame arg (=0) start with this frame -130: --nframes arg process the given number of frames -130: -119/244 Test #112: integration_Compare_csg_map_gmx_output ............. Passed 0.22 sec +117/244 Test #114: integration_Compare_csg_map_gmx_xtc_output ......... Passed 0.22 sec test 135 Start 135: traj_forceHelp 135: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps/traj_force/csg_traj_force "--help" 135: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/csgapps 135: Test timeout computed to be: 10000000 -120/244 Test #114: integration_Compare_csg_map_gmx_xtc_output ......... Passed 0.23 sec +118/244 Test #116: integration_Compare_csg_property_output ............ Passed 0.22 sec test 136 Start 136: unit_test_bead 136: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests/unit_test_bead 136: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests 136: Test timeout computed to be: 10000000 -121/244 Test #118: integration_Compare_csg_property_output2 ........... Passed 0.24 sec +119/244 Test #118: integration_Compare_csg_property_output2 ........... Passed 0.22 sec test 137 Start 137: unit_test_beadtriple 137: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests/unit_test_beadtriple 137: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests 137: Test timeout computed to be: 10000000 -122/244 Test #120: integration_Compare_csg_property_output3 ........... Passed 0.24 sec +120/244 Test #120: integration_Compare_csg_property_output3 ........... Passed 0.22 sec test 138 Start 138: unit_test_basebead 138: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests/unit_test_basebead 138: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests 138: Test timeout computed to be: 10000000 -123/244 Test #122: integration_Compare_csg_property_output4 ........... Passed 0.24 sec +121/244 Test #122: integration_Compare_csg_property_output4 ........... Passed 0.23 sec test 139 Start 139: unit_test_beadmotif_algorithms 139: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests/unit_test_beadmotif_algorithms 139: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests 139: Test timeout computed to be: 10000000 -124/244 Test #125: Compare_csg_boltzmann_output_ppy ................... Passed 0.25 sec +122/244 Test #125: Compare_csg_boltzmann_output_ppy ................... Passed 0.24 sec test 140 Start 140: unit_test_beadmotif_base 140: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests/unit_test_beadmotif_base 140: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests 140: Test timeout computed to be: 10000000 -125/244 Test #62: integration_Compare_csg_fmatch_3body_output1 ....... Passed 0.25 sec +123/244 Test #128: Compare_csg_boltzmann_output_mma ................... Passed 0.23 sec test 141 Start 141: unit_test_beadmotif_connector 141: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests/unit_test_beadmotif_connector 141: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests 141: Test timeout computed to be: 10000000 -126/244 Test #63: integration_Compare_csg_fmatch_3body_output2 ....... Passed 0.25 sec +87: Comparing all.gmc and /build/reproducible-path/votca-2022.1/csg/src/tools/references/LJ1-LJ2/smaller_system/all.gmc to a tolerance of 5e-05 +124/244 Test #87: integration_Compare_csg_stat-imc_multi_output_2 .... Passed 0.55 sec test 142 Start 142: unit_test_beadstructure_base 142: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests/unit_test_beadstructure_base 142: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests 142: Test timeout computed to be: 10000000 -127/244 Test #64: integration_Compare_csg_fmatch_3body_output3 ....... Passed 0.25 sec -test 143 - Start 143: unit_test_beadstructure_algorithms - -143: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests/unit_test_beadstructure_algorithms -143: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests -143: Test timeout computed to be: 10000000 -128/244 Test #128: Compare_csg_boltzmann_output_mma ................... Passed 0.25 sec -test 144 - Start 144: unit_test_bondedstatistics - -144: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests/unit_test_bondedstatistics -144: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests -144: Test timeout computed to be: 10000000 -129/244 Test #130: orientcorrHelp ..................................... Passed 0.23 sec -test 145 - Start 145: unit_test_csg_topology - -145: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests/unit_test_csg_topology -145: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests -145: Test timeout computed to be: 10000000 129: ================================================== 129: ======== VOTCA (http://www.votca.org) ======== 129: ================================================== @@ -30389,13 +30332,97 @@ 129: --first-frame arg (=0) start with this frame 129: --nframes arg process the given number of frames 129: -130/244 Test #129: fluctuationsHelp ................................... Passed 0.28 sec -test 146 - Start 146: unit_test_interaction +125/244 Test #129: fluctuationsHelp ................................... Passed 0.26 sec +test 143 + Start 143: unit_test_beadstructure_algorithms -146: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests/unit_test_interaction -146: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests -146: Test timeout computed to be: 10000000 +143: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests/unit_test_beadstructure_algorithms +143: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests +143: Test timeout computed to be: 10000000 +130: ================================================== +130: ======== VOTCA (http://www.votca.org) ======== +130: ================================================== +130: +130: please submit bugs to https://github.com/votca/csg/issues +130: +130: orientcorr, version 2022.1 (compiled Jan 2 2023, 20:10:30) +130: votca_tools, version 2022.1 (compiled Jan 2 2023, 20:10:30) +130: gromacs, 2022.5-Debian_2022.5_2 (double precision) +130: +130: Calculates the orientational correlation function +130: <3/2*u(0)*u(r) - 1/2> +130: for a polymer melt, where u is the vector pointing along a bond and +130: r the distance between bond segments (centered on middle of bond). +130: +130: The output is correlation.dat (with intra-molecular contributions) and +130: correlation_excl.dat, where inter-molecular contributions are excluded. +130: +130: +130: Allowed options: +130: -h [ --help ] display this help and exit +130: --verbose be loud and noisy +130: --verbose1 be very loud and noisy +130: -v [ --verbose2 ] be extremly loud and noisy +130: --top arg atomistic topology file +130: +130: Neighbor search options: +130: -c [ --cutoff ] arg (=1) cutoff for the neighbor search +130: --nbins arg (=40) number of bins for the grid +130: --nbmethod arg (=grid) neighbor search algorithm (simple or grid) +130: +130: Threading options: +130: --nt arg (=1) number of threads +130: +130: Trajectory options: +130: --trj arg atomistic trajectory file +130: --begin arg (=0) skip frames before this time (only works for +130: Gromacs files) +130: --first-frame arg (=0) start with this frame +130: --nframes arg process the given number of frames +130: +126/244 Test #130: orientcorrHelp ..................................... Passed 0.26 sec +test 144 + Start 144: unit_test_bondedstatistics + +144: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests/unit_test_bondedstatistics +144: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests +144: Test timeout computed to be: 10000000 +131: ================================================== +131: ======== VOTCA (http://www.votca.org) ======== +131: ================================================== +131: +131: please submit bugs to https://github.com/votca/csg/issues +131: +131: csg_part_dist, version 2022.1 (compiled Jan 2 2023, 20:10:30) +131: votca_tools, version 2022.1 (compiled Jan 2 2023, 20:10:30) +131: gromacs, 2022.5-Debian_2022.5_2 (double precision) +131: +131: This program reads a topology and (set of) trajectory(ies). For every +131: binned value of a chosen coordinate, it outputs the time-averaged number of +131: particles, listed by particle types. +131: +131: Allowed options: +131: --top arg topology file +131: --trj arg trajectory file +131: --grid arg output grid spacing (min:step:max) +131: --out arg output particle distribution table +131: --ptypes arg particle types to include in the analysis +131: arg: file - particle types separated by space +131: default: all particle types +131: --first_frame arg first frame considered for analysis +131: --last_frame arg last frame considered for analysis +131: --coord arg coordinate analyzed ('x', 'y', or 'z' (default)) +131: --shift_com shift center of mass to zero +131: --comment arg store a comment in the output table +131: --help produce this help message +131: +127/244 Test #131: part_distHelp ...................................... Passed 0.26 sec +test 145 + Start 145: unit_test_csg_topology + +145: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests/unit_test_csg_topology +145: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests +145: Test timeout computed to be: 10000000 132: ================================================== 132: ======== VOTCA (http://www.votca.org) ======== 132: ================================================== @@ -30444,7 +30471,45 @@ 132: --first-frame arg (=0) start with this frame 132: --nframes arg process the given number of frames 132: -131/244 Test #132: partial_rdfHelp .................................... Passed 0.24 sec +128/244 Test #132: partial_rdfHelp .................................... Passed 0.26 sec +test 146 + Start 146: unit_test_interaction + +146: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests/unit_test_interaction +146: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests +146: Test timeout computed to be: 10000000 +133: ================================================== +133: ======== VOTCA (http://www.votca.org) ======== +133: ================================================== +133: +133: please submit bugs to https://github.com/votca/csg/issues +133: +133: radii, version 2022.1 (compiled Jan 2 2023, 20:10:30) +133: votca_tools, version 2022.1 (compiled Jan 2 2023, 20:10:30) +133: gromacs, 2022.5-Debian_2022.5_2 (double precision) +133: +133: calculate gyration- and hydrodynamic radius for a specific molecule or molecule type +133: +133: +133: Allowed options: +133: -h [ --help ] display this help and exit +133: --verbose be loud and noisy +133: --verbose1 be very loud and noisy +133: -v [ --verbose2 ] be extremly loud and noisy +133: --top arg atomistic topology file +133: +133: Molecule filter options: +133: --mol arg molecule number +133: --molname arg (=*) pattern for molecule name +133: +133: Trajectory options: +133: --trj arg atomistic trajectory file +133: --begin arg (=0) skip frames before this time (only works for +133: Gromacs files) +133: --first-frame arg (=0) start with this frame +133: --nframes arg process the given number of frames +133: +129/244 Test #133: radiiHelp .......................................... Passed 0.26 sec test 147 Start 147: unit_test_lammpsdatareader @@ -30494,87 +30559,13 @@ 134: --first-frame arg (=0) start with this frame 134: --nframes arg process the given number of frames 134: -132/244 Test #134: sphericalorderHelp ................................. Passed 0.23 sec +130/244 Test #134: sphericalorderHelp ................................. Passed 0.27 sec test 148 Start 148: unit_test_lammpsdumpreaderwriter 148: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests/unit_test_lammpsdumpreaderwriter 148: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests 148: Test timeout computed to be: 10000000 -131: ================================================== -131: ======== VOTCA (http://www.votca.org) ======== -131: ================================================== -131: -131: please submit bugs to https://github.com/votca/csg/issues -131: -131: csg_part_dist, version 2022.1 (compiled Jan 2 2023, 20:10:30) -131: votca_tools, version 2022.1 (compiled Jan 2 2023, 20:10:30) -131: gromacs, 2022.5-Debian_2022.5_2 (double precision) -131: -131: This program reads a topology and (set of) trajectory(ies). For every -131: binned value of a chosen coordinate, it outputs the time-averaged number of -131: particles, listed by particle types. -131: -131: Allowed options: -131: --top arg topology file -131: --trj arg trajectory file -131: --grid arg output grid spacing (min:step:max) -131: --out arg output particle distribution table -131: --ptypes arg particle types to include in the analysis -131: arg: file - particle types separated by space -131: default: all particle types -131: --first_frame arg first frame considered for analysis -131: --last_frame arg last frame considered for analysis -131: --coord arg coordinate analyzed ('x', 'y', or 'z' (default)) -131: --shift_com shift center of mass to zero -131: --comment arg store a comment in the output table -131: --help produce this help message -131: -133/244 Test #131: part_distHelp ...................................... Passed 0.30 sec -test 149 - Start 149: unit_test_nblist_3body - -149: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests/unit_test_nblist_3body -149: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests -149: Test timeout computed to be: 10000000 -133: ================================================== -133: ======== VOTCA (http://www.votca.org) ======== -133: ================================================== -133: -133: please submit bugs to https://github.com/votca/csg/issues -133: -133: radii, version 2022.1 (compiled Jan 2 2023, 20:10:30) -133: votca_tools, version 2022.1 (compiled Jan 2 2023, 20:10:30) -133: gromacs, 2022.5-Debian_2022.5_2 (double precision) -133: -133: calculate gyration- and hydrodynamic radius for a specific molecule or molecule type -133: -133: -133: Allowed options: -133: -h [ --help ] display this help and exit -133: --verbose be loud and noisy -133: --verbose1 be very loud and noisy -133: -v [ --verbose2 ] be extremly loud and noisy -133: --top arg atomistic topology file -133: -133: Molecule filter options: -133: --mol arg molecule number -133: --molname arg (=*) pattern for molecule name -133: -133: Trajectory options: -133: --trj arg atomistic trajectory file -133: --begin arg (=0) skip frames before this time (only works for -133: Gromacs files) -133: --first-frame arg (=0) start with this frame -133: --nframes arg process the given number of frames -133: -134/244 Test #133: radiiHelp .......................................... Passed 0.30 sec -test 150 - Start 150: unit_test_nblistgrid_3body - -150: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests/unit_test_nblistgrid_3body -150: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests -150: Test timeout computed to be: 10000000 135: ================================================== 135: ======== VOTCA (http://www.votca.org) ======== 135: ================================================== @@ -30606,142 +30597,170 @@ 135: --first-frame arg (=0) start with this frame 135: --nframes arg process the given number of frames 135: -135/244 Test #135: traj_forceHelp ..................................... Passed 0.29 sec +131/244 Test #135: traj_forceHelp ..................................... Passed 0.26 sec +test 149 + Start 149: unit_test_nblist_3body + +149: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests/unit_test_nblist_3body +149: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests +149: Test timeout computed to be: 10000000 +136: Running 3 test cases... +136: +136: *** No errors detected +136:  +132/244 Test #136: unit_test_bead ..................................... Passed 0.26 sec +test 150 + Start 150: unit_test_nblistgrid_3body + +150: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests/unit_test_nblistgrid_3body +150: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests +150: Test timeout computed to be: 10000000 +61: This should be a number: -0.0413191 +61: This should be a number: -0.854333 +61: +61: Block No1 done! +61: Updating file: CG-CG.force +61: Updating files: CG-CG-CG.pot and: CG-CG-CG.force +61: +61: We are done, thank you very much! +137: Running 1 test case... +137: +137: *** No errors detected +137:  +138: Running 2 test cases... +138: +138: *** No errors detected +138:  +139: Running 4 test cases... +139: +139: *** No errors detected +139:  +140: Running 4 test cases... +140: +140: *** No errors detected +140:  +141: Running 3 test cases... +141: +141: *** No errors detected +141:  +142: Running 10 test cases... +142: +142: *** No errors detected +142:  +143: Running 1 test case... +143: Calling break into structures +143: Bead Count 1 3 +143: Bead Count 2 5 +143: +143: *** No errors detected +143:  +144: Running 3 test cases... +144: +144: *** No errors detected +144:  +145: Running 6 test cases... +145: interaction name :bond +145: interaction name :bond +145: +145: *** No errors detected +145:  +146: Running 5 test cases... +146: molecule 1:large 1:index 1 +146: molecule 1:medium 1:index 1 +146: molecule 1:small 1:index 1 +133/244 Test #61: integration_Run_csg_fmatch_3body ................... Passed 2.49 sec +test 62 + Start 62: integration_Compare_csg_fmatch_3body_output1 + +62: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_compare "--etol" "5e-5" "-f1" "CG-CG.force" "-f2" "/build/reproducible-path/votca-2022.1/csg/src/tools/references/spce/CG-CG.force.fmatch_3body" +62: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_fmatch_3body +62: Test timeout computed to be: 10000000 +134/244 Test #137: unit_test_beadtriple ............................... Passed 0.28 sec +test 63 + Start 63: integration_Compare_csg_fmatch_3body_output2 + +63: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_compare "--etol" "5e-5" "-f1" "CG-CG-CG.force" "-f2" "/build/reproducible-path/votca-2022.1/csg/src/tools/references/spce/CG-CG-CG.force.fmatch_3body" +63: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_fmatch_3body +63: Test timeout computed to be: 10000000 +135/244 Test #138: unit_test_basebead ................................. Passed 0.28 sec +test 64 + Start 64: integration_Compare_csg_fmatch_3body_output3 + +64: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/tools/scripts/votca_compare "--etol" "5e-5" "-f1" "CG-CG-CG.pot" "-f2" "/build/reproducible-path/votca-2022.1/csg/src/tools/references/spce/CG-CG-CG.pot.fmatch_3body" +64: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_fmatch_3body +64: Test timeout computed to be: 10000000 +136/244 Test #139: unit_test_beadmotif_algorithms ..................... Passed 0.28 sec test 151 Start 151: unit_test_boundarycondition 151: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests/unit_test_boundarycondition 151: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests 151: Test timeout computed to be: 10000000 -136: Running 3 test cases... -136: -136: *** No errors detected -136:  -136/244 Test #136: unit_test_bead ..................................... Passed 0.29 sec +137/244 Test #140: unit_test_beadmotif_base ........................... Passed 0.28 sec test 152 Start 152: unit_test_pdbreader 152: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests/unit_test_pdbreader 152: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests 152: Test timeout computed to be: 10000000 -137: Running 1 test case... -137: -137: *** No errors detected -137:  -137/244 Test #137: unit_test_beadtriple ............................... Passed 0.29 sec +138/244 Test #141: unit_test_beadmotif_connector ...................... Passed 0.28 sec test 153 Start 153: unit_test_tabulatedpotential 153: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests/unit_test_tabulatedpotential 153: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests 153: Test timeout computed to be: 10000000 -138: Running 2 test cases... -138: -138: *** No errors detected -138:  -138/244 Test #138: unit_test_basebead ................................. Passed 0.29 sec +139/244 Test #142: unit_test_beadstructure_base ....................... Passed 0.27 sec test 154 Start 154: unit_test_triplelist 154: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests/unit_test_triplelist 154: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/src/tests 154: Test timeout computed to be: 10000000 -139: Running 4 test cases... -139: -139: *** No errors detected -139:  -139/244 Test #139: unit_test_beadmotif_algorithms ..................... Passed 0.28 sec +140/244 Test #143: unit_test_beadstructure_algorithms ................. Passed 0.27 sec test 155 Start 155: unit_iie.py 155: Test command: /usr/bin/python3 "-m" "pytest" "-q" "/build/reproducible-path/votca-2022.1/csg/share/scripts/inverse/iie.py" 155: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/scripts/inverse 155: Test timeout computed to be: 10000000 -140: Running 4 test cases... -140: -140: *** No errors detected -140:  -140/244 Test #140: unit_test_beadmotif_base ........................... Passed 0.29 sec +141/244 Test #144: unit_test_bondedstatistics ......................... Passed 0.27 sec test 156 Start 156: template_serialHelp 156: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/template/template_serial "--help" 156: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/template 156: Test timeout computed to be: 10000000 -141: Running 3 test cases... -141: -141: *** No errors detected -141:  -141/244 Test #141: unit_test_beadmotif_connector ...................... Passed 0.28 sec +142/244 Test #145: unit_test_csg_topology ............................. Passed 0.27 sec test 157 Start 157: template_threadedHelp 157: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/template/template_threaded "--help" 157: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg/share/template 157: Test timeout computed to be: 10000000 -142: Running 10 test cases... -142: -142: *** No errors detected -142:  -142/244 Test #142: unit_test_beadstructure_base ....................... Passed 0.28 sec +146: +146: *** No errors detected +146:  +143/244 Test #146: unit_test_interaction .............................. Passed 0.27 sec test 158 Start 158: regression_UninstallExists 158: Test command: /usr/bin/cmake "-DFileToCheck=/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg-tutorials/cmake_uninstall.cmake" "-P" "/build/reproducible-path/votca-2022.1/csg-tutorials/CMakeModules/FileExists.cmake" 158: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg-tutorials 158: Test timeout computed to be: 10000000 -143: Running 1 test case... -143: Calling break into structures -143: Bead Count 1 3 -143: Bead Count 2 5 -143: -143: *** No errors detected -143:  -143/244 Test #143: unit_test_beadstructure_algorithms ................. Passed 0.28 sec +148: Running 2 test cases... +148: Reading frame, timestep 1 +148: Reading frame, timestep 1 +148: +148: *** No errors detected +148:  +144/244 Test #148: unit_test_lammpsdumpreaderwriter ................... Passed 0.24 sec test 159 Start 159: integration_xtp_mapHelp 159: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tools/xtp_map "--help" 159: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tools 159: Test timeout computed to be: 10000000 -145: Running 6 test cases... -145: interaction name :bond -145: interaction name :bond -145: -145: *** No errors detected -145:  -144/244 Test #145: unit_test_csg_topology ............................. Passed 0.27 sec -test 160 - Start 160: integration_xtp_runHelp - -160: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tools/xtp_run "--help" -160: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tools -160: Test timeout computed to be: 10000000 -144: Running 3 test cases... -144: -144: *** No errors detected -144:  -145/244 Test #144: unit_test_bondedstatistics ......................... Passed 0.30 sec -test 161 - Start 161: integration_xtp_toolsHelp - -161: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tools/xtp_tools "--help" -161: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tools -161: Test timeout computed to be: 10000000 -146: Running 5 test cases... -146: molecule 1:large 1:index 1 -146: molecule 1:medium 1:index 1 -146: molecule 1:small 1:index 1 -146: -146: *** No errors detected -146:  -146/244 Test #146: unit_test_interaction .............................. Passed 0.27 sec -test 162 - Start 162: integration_xtp_parallelHelp - -162: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tools/xtp_parallel "--help" -162: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tools -162: Test timeout computed to be: 10000000 147: Running 3 test cases... 147: 147: WARNING: The votca lammps data reader is only able to read lammps files formatted in the following styles: @@ -30825,59 +30844,70 @@ 147: 147: *** No errors detected 147:  -147/244 Test #147: unit_test_lammpsdatareader ......................... Passed 0.28 sec +145/244 Test #147: unit_test_lammpsdatareader ......................... Passed 0.29 sec +test 160 + Start 160: integration_xtp_runHelp + +160: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tools/xtp_run "--help" +160: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tools +160: Test timeout computed to be: 10000000 +149: Running 2 test cases... +149: +149: *** No errors detected +149:  +146/244 Test #149: unit_test_nblist_3body ............................. Passed 0.28 sec +test 161 + Start 161: integration_xtp_toolsHelp + +161: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tools/xtp_tools "--help" +161: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tools +161: Test timeout computed to be: 10000000 +150: Running 2 test cases... +150: +150: *** No errors detected +150:  +147/244 Test #150: unit_test_nblistgrid_3body ......................... Passed 0.28 sec +test 162 + Start 162: integration_xtp_parallelHelp + +162: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tools/xtp_parallel "--help" +162: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tools +162: Test timeout computed to be: 10000000 +62: Comparing CG-CG.force and /build/reproducible-path/votca-2022.1/csg/src/tools/references/spce/CG-CG.force.fmatch_3body to a tolerance of 5e-05 +148/244 Test #62: integration_Compare_csg_fmatch_3body_output1 ....... Passed 0.28 sec test 163 Start 163: unit_test_adiis 163: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_adiis 163: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_adiis 163: Test timeout computed to be: 10000000 -148: Running 2 test cases... -148: Reading frame, timestep 1 -148: Reading frame, timestep 1 -148: -148: *** No errors detected -148:  -148/244 Test #148: unit_test_lammpsdumpreaderwriter ................... Passed 0.27 sec +63: Comparing CG-CG-CG.force and /build/reproducible-path/votca-2022.1/csg/src/tools/references/spce/CG-CG-CG.force.fmatch_3body to a tolerance of 5e-05 +149/244 Test #63: integration_Compare_csg_fmatch_3body_output2 ....... Passed 0.28 sec test 164 Start 164: unit_test_aobasis 164: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_aobasis 164: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_aobasis 164: Test timeout computed to be: 10000000 -149: Running 2 test cases... -149: -149: *** No errors detected -149:  -149/244 Test #149: unit_test_nblist_3body ............................. Passed 0.26 sec +64: Comparing CG-CG-CG.pot and /build/reproducible-path/votca-2022.1/csg/src/tools/references/spce/CG-CG-CG.pot.fmatch_3body to a tolerance of 5e-05 +150/244 Test #64: integration_Compare_csg_fmatch_3body_output3 ....... Passed 0.28 sec test 165 Start 165: unit_test_aomatrix 165: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_aomatrix 165: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_aomatrix 165: Test timeout computed to be: 10000000 -150: Running 2 test cases... -150: -150: *** No errors detected -150:  -150/244 Test #150: unit_test_nblistgrid_3body ......................... Passed 0.26 sec +151: Running 3 test cases... +151: +151: *** No errors detected +151:  +151/244 Test #151: unit_test_boundarycondition ........................ Passed 0.28 sec test 166 Start 166: unit_test_aomatrix3d 166: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_aomatrix3d 166: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_aomatrix3d 166: Test timeout computed to be: 10000000 -151: Running 3 test cases... -151: -151: *** No errors detected -151:  -151/244 Test #151: unit_test_boundarycondition ........................ Passed 0.26 sec -test 167 - Start 167: unit_test_aotransform - -167: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_aotransform -167: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_aotransform -167: Test timeout computed to be: 10000000 152: Running 1 test case... 152: The VOTCA pdb reader attempts to follow the official format: 152: http://www.wwpdb.org/documentation/file-format @@ -30928,27 +30958,27 @@ 152: 152: *** No errors detected 152:  -152/244 Test #152: unit_test_pdbreader ................................ Passed 0.26 sec -test 168 - Start 168: unit_test_aopotential +152/244 Test #152: unit_test_pdbreader ................................ Passed 0.28 sec +test 167 + Start 167: unit_test_aotransform -168: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_aopotential -168: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_aopotential -168: Test timeout computed to be: 10000000 +167: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_aotransform +167: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_aotransform +167: Test timeout computed to be: 10000000 +153: Running 3 test cases... +153: Number of H2 96 +153: bonded_values after pulling out of statistics 4560 154: Running 2 test cases... 154: 154: *** No errors detected 154:  -153/244 Test #154: unit_test_triplelist ............................... Passed 0.24 sec -test 169 - Start 169: unit_test_atom +153/244 Test #154: unit_test_triplelist ............................... Passed 0.27 sec +test 168 + Start 168: unit_test_aopotential -169: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_atom -169: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_atom -169: Test timeout computed to be: 10000000 -153: Running 3 test cases... -153: Number of H2 96 -153: bonded_values after pulling out of statistics 4560 +168: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_aopotential +168: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_aopotential +168: Test timeout computed to be: 10000000 156: ================================================== 156: ======== VOTCA (http://www.votca.org) ======== 156: ================================================== @@ -30979,6 +31009,13 @@ 156: --first-frame arg (=0) start with this frame 156: --nframes arg process the given number of frames 156: +154/244 Test #156: template_serialHelp ................................ Passed 0.25 sec +test 169 + Start 169: unit_test_atom + +169: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_atom +169: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_atom +169: Test timeout computed to be: 10000000 157: ================================================== 157: ======== VOTCA (http://www.votca.org) ======== 157: ================================================== @@ -31012,7 +31049,21 @@ 157: --first-frame arg (=0) start with this frame 157: --nframes arg process the given number of frames 157: +155/244 Test #157: template_threadedHelp .............................. Passed 0.25 sec +test 170 + Start 170: unit_test_qmatom + +170: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_qmatom +170: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_qmatom +170: Test timeout computed to be: 10000000 158: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/csg-tutorials/cmake_uninstall.cmake exists. +156/244 Test #158: regression_UninstallExists ......................... Passed 0.25 sec +test 171 + Start 171: unit_test_polarsegment + +171: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_polarsegment +171: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_polarsegment +171: Test timeout computed to be: 10000000 159: ================================================== 159: ======== VOTCA (http://www.votca.org) ======== 159: ================================================== @@ -31041,6 +31092,13 @@ 159: -b [ --begin ] arg (=0) start time in simulation 159: -n [ --nframes ] arg (=1) number of frames to process 159: +157/244 Test #159: integration_xtp_mapHelp ............................ Passed 0.26 sec +test 172 + Start 172: unit_test_qmmolecule + +172: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_qmmolecule +172: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_qmmolecule +172: Test timeout computed to be: 10000000 160: ================================================== 160: ======== VOTCA (http://www.votca.org) ======== 160: ================================================== @@ -31074,6 +31132,13 @@ 160: -n [ --nframes ] arg (=1) number of frames to process 160: -s [ --save ] arg (=1) whether or not to save changes to state file 160: +158/244 Test #160: integration_xtp_runHelp ............................ Passed 0.27 sec +test 173 + Start 173: unit_test_basisset + +173: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_basisset +173: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_basisset +173: Test timeout computed to be: 10000000 161: ================================================== 161: ======== VOTCA (http://www.votca.org) ======== 161: ================================================== @@ -31103,6 +31168,13 @@ 161: multiple options 161: -p [ --printoptions ] arg Prints xml options of a Tool 161: +159/244 Test #161: integration_xtp_toolsHelp .......................... Passed 0.28 sec +test 174 + Start 174: unit_test_bseoperator_btda + +174: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_bseoperator_btda +174: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_bseoperator_btda +174: Test timeout computed to be: 10000000 162: ================================================== 162: ======== VOTCA (http://www.votca.org) ======== 162: ================================================== @@ -31143,102 +31215,74 @@ 162: -j [ --jobs ] arg (=run) task(s) to perform: write, run, read 162: -m [ --maxjobs ] arg (=-1) maximum number of jobs to process (-1 = inf) 162: -154/244 Test #156: template_serialHelp ................................ Passed 0.23 sec -test 170 - Start 170: unit_test_qmatom - -170: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_qmatom -170: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_qmatom -170: Test timeout computed to be: 10000000 -155/244 Test #157: template_threadedHelp .............................. Passed 0.24 sec -test 171 - Start 171: unit_test_polarsegment - -171: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_polarsegment -171: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_polarsegment -171: Test timeout computed to be: 10000000 -156/244 Test #158: regression_UninstallExists ......................... Passed 0.25 sec -test 172 - Start 172: unit_test_qmmolecule - -172: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_qmmolecule -172: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_qmmolecule -172: Test timeout computed to be: 10000000 -157/244 Test #159: integration_xtp_mapHelp ............................ Passed 0.26 sec -test 173 - Start 173: unit_test_basisset - -173: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_basisset -173: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_basisset -173: Test timeout computed to be: 10000000 -158/244 Test #160: integration_xtp_runHelp ............................ Passed 0.26 sec -test 174 - Start 174: unit_test_bseoperator_btda - -174: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_bseoperator_btda -174: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_bseoperator_btda -174: Test timeout computed to be: 10000000 -159/244 Test #161: integration_xtp_toolsHelp .......................... Passed 0.26 sec +163: Running 1 test case... +163: +163: *** No errors detected +163:  +167: Running 2 test cases... +167: +167: *** No errors detected +167:  +160/244 Test #162: integration_xtp_parallelHelp ....................... Passed 0.28 sec test 175 Start 175: unit_test_bfgs_trm 175: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_bfgs_trm 175: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_bfgs_trm 175: Test timeout computed to be: 10000000 -160/244 Test #162: integration_xtp_parallelHelp ....................... Passed 0.28 sec +161/244 Test #163: unit_test_adiis .................................... Passed 0.29 sec test 176 Start 176: unit_test_bse 176: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_bse 176: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_bse 176: Test timeout computed to be: 10000000 -163: Running 1 test case... -163: -163: *** No errors detected -163:  -161/244 Test #163: unit_test_adiis .................................... Passed 0.29 sec +162/244 Test #167: unit_test_aotransform .............................. Passed 0.24 sec test 177 Start 177: unit_test_convergenceacc 177: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_convergenceacc 177: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_convergenceacc 177: Test timeout computed to be: 10000000 -167: Running 2 test cases... -167: -167: *** No errors detected -167:  -162/244 Test #167: unit_test_aotransform .............................. Passed 0.25 sec +169: Running 3 test cases... +169: +169: *** No errors detected +169:  +163/244 Test #169: unit_test_atom ..................................... Passed 0.23 sec test 178 Start 178: unit_test_dftcoupling 178: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_dftcoupling 178: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_dftcoupling 178: Test timeout computed to be: 10000000 -169: Running 3 test cases... -169: -169: *** No errors detected -169:  -163/244 Test #169: unit_test_atom ..................................... Passed 0.25 sec +170: Running 2 test cases... +170: +170: *** No errors detected +170:  +164/244 Test #170: unit_test_qmatom ................................... Passed 0.30 sec test 179 Start 179: unit_test_diis 179: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_diis 179: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_diis 179: Test timeout computed to be: 10000000 -170: Running 2 test cases... -170: -170: *** No errors detected -166: Running 2 test cases... -166: -166: *** No errors detected -170:  -164/244 Test #170: unit_test_qmatom ................................... Passed 0.28 sec +171: Running 5 test cases... +171: +171: *** No errors detected +171:  +165/244 Test #171: unit_test_polarsegment ............................. Passed 0.34 sec test 180 Start 180: unit_test_ecpaobasis 180: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_ecpaobasis 180: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_ecpaobasis 180: Test timeout computed to be: 10000000 +166: Running 2 test cases... +166: +166: *** No errors detected +174: Running 1 test case... +174: +174: *** No errors detected 175: Running 3 test cases... 175: 7 175: 12 @@ -31248,140 +31292,115 @@ 173: Running 1 test case... 173: 173: *** No errors detected -166:  -165/244 Test #166: unit_test_aomatrix3d ............................... Passed 0.40 sec +172: Running 3 test cases... +172: +172: *** No errors detected +175:  +166/244 Test #175: unit_test_bfgs_trm ................................. Passed 0.27 sec test 181 Start 181: unit_test_eigen 181: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_eigen 181: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_eigen 181: Test timeout computed to be: 10000000 -175:  +174:  +165: Running 3 test cases... +165: +165: *** No errors detected 173:  -166/244 Test #173: unit_test_basisset ................................. Passed 0.27 sec +166:  +167/244 Test #166: unit_test_aomatrix3d ............................... Passed 0.51 sec test 182 Start 182: unit_test_eris 182: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_eris 182: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_eris 182: Test timeout computed to be: 10000000 -167/244 Test #175: unit_test_bfgs_trm ................................. Passed 0.25 sec +168/244 Test #173: unit_test_basisset ................................. Passed 0.38 sec test 183 Start 183: unit_test_espfit 183: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_espfit 183: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_espfit 183: Test timeout computed to be: 10000000 -174: Running 1 test case... -174: -174: *** No errors detected -171: Running 5 test cases... -171: -171: *** No errors detected -181: Running 3 test cases... -181: -181: *** No errors detected -181:  -168/244 Test #181: unit_test_eigen .................................... Passed 0.06 sec +169/244 Test #174: unit_test_bseoperator_btda ......................... Passed 0.37 sec test 184 Start 184: unit_test_glink 184: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_glink 184: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_glink 184: Test timeout computed to be: 10000000 -174:  -169/244 Test #174: unit_test_bseoperator_btda ......................... Passed 0.31 sec +165:  +172:  +181: Running 3 test cases... +181: +181: *** No errors detected +181:  +164: Running 3 test cases... +164: +164: *** No errors detected +164:  +170/244 Test #164: unit_test_aobasis .................................. Passed 0.61 sec test 185 Start 185: unit_test_hdf5 185: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_hdf5 185: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_hdf5 185: Test timeout computed to be: 10000000 -171:  -170/244 Test #171: unit_test_polarsegment ............................. Passed 0.40 sec +171/244 Test #165: unit_test_aomatrix ................................. Passed 0.63 sec test 186 Start 186: unit_test_cubefile_writer 186: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_cubefile_writer 186: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_cubefile_writer 186: Test timeout computed to be: 10000000 -172: Running 3 test cases... -172: -172: *** No errors detected -165: Running 3 test cases... -165: -165: *** No errors detected -172:  -165:  -184: Running 1 test case... -184: -184: *** No errors detected -184:  -171/244 Test #165: unit_test_aomatrix ................................. Passed 0.52 sec +172/244 Test #172: unit_test_qmmolecule ............................... Passed 0.50 sec test 187 Start 187: unit_test_densityintegration 187: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_densityintegration 187: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_densityintegration 187: Test timeout computed to be: 10000000 -172/244 Test #172: unit_test_qmmolecule ............................... Passed 0.41 sec +173/244 Test #181: unit_test_eigen .................................... Passed 0.17 sec test 188 Start 188: unit_test_vxc_potential 188: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_vxc_potential 188: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_vxc_potential 188: Test timeout computed to be: 10000000 -173/244 Test #184: unit_test_glink .................................... Passed 0.10 sec +184: Running 1 test case... +184: +184: *** No errors detected +184:  +174/244 Test #184: unit_test_glink .................................... Passed 0.12 sec test 189 Start 189: unit_test_vxc_grid 189: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_vxc_grid 189: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_vxc_grid 189: Test timeout computed to be: 10000000 -164: Running 3 test cases... -164: -164: *** No errors detected -164:  -174/244 Test #164: unit_test_aobasis .................................. Passed 0.62 sec +179: Running 1 test case... +179: +179: *** No errors detected +179:  +175/244 Test #179: unit_test_diis ..................................... Passed 0.34 sec test 190 Start 190: unit_test_regular_grid 190: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_regular_grid 190: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_regular_grid 190: Test timeout computed to be: 10000000 -179: Running 1 test case... -179: -179: *** No errors detected -179:  -175/244 Test #179: unit_test_diis ..................................... Passed 0.30 sec -test 191 - Start 191: unit_test_orbitals - -191: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_orbitals -191: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_orbitals -191: Test timeout computed to be: 10000000 178: Running 1 test case... 178: 178: *** No errors detected 178:  176/244 Test #178: unit_test_dftcoupling .............................. Passed 0.45 sec -test 192 - Start 192: unit_test_polarsite - -192: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_polarsite -192: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_polarsite -192: Test timeout computed to be: 10000000 -185: Running 7 test cases... -185: -185: *** No errors detected -185:  -177/244 Test #185: unit_test_hdf5 ..................................... Passed 0.64 sec -test 193 - Start 193: unit_test_staticsite +test 191 + Start 191: unit_test_orbitals -193: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_staticsite -193: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_staticsite -193: Test timeout computed to be: 10000000 +191: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_orbitals +191: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_orbitals +191: Test timeout computed to be: 10000000 177: Running 1 test case... 177: result mos 177: 0.996559 0.223082 -1.78969e-15 -4.95242e-15 -2.02391e-15 1.17866e-16 -1.65232e-16 -3.72532e-16 -0.0301914 -6.32849e-16 -3.89012e-16 5.80048e-17 0.102052 -1.34372e-14 -8.16187e-16 2.76341e-15 -0.111923 @@ -31433,129 +31452,151 @@ 177: 2.19073e-10 -2.30681e-09 0.171264 -0.929341 -0.311578 177: 177: *** No errors detected +185: Running 7 test cases... +185: +185: *** No errors detected +177:  +177/244 Test #177: unit_test_convergenceacc ........................... Passed 0.87 sec +test 192 + Start 192: unit_test_polarsite + +192: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_polarsite +192: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_polarsite +192: Test timeout computed to be: 10000000 +185:  +178/244 Test #185: unit_test_hdf5 ..................................... Passed 0.60 sec +test 193 + Start 193: unit_test_staticsite + +193: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_staticsite +193: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_staticsite +193: Test timeout computed to be: 10000000 186: Running 1 test case... 186: 186: *** No errors detected -177:  -178/244 Test #177: unit_test_convergenceacc ........................... Passed 0.96 sec +186:  +179/244 Test #186: unit_test_cubefile_writer .......................... Passed 0.85 sec test 194 Start 194: unit_test_ppm 194: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_ppm 194: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_ppm 194: Test timeout computed to be: 10000000 -192: Running 5 test cases... -192: -192: *** No errors detected -186:  -179/244 Test #186: unit_test_cubefile_writer .......................... Passed 0.79 sec +190: Running 2 test cases... +190: +190: *** No errors detected +190:  +180/244 Test #190: unit_test_regular_grid ............................. Passed 0.96 sec test 195 Start 195: unit_test_qmnblist 195: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_qmnblist 195: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_qmnblist 195: Test timeout computed to be: 10000000 +192: Running 5 test cases... +192: +192: *** No errors detected 192:  -180/244 Test #192: unit_test_polarsite ................................ Passed 0.62 sec +181/244 Test #192: unit_test_polarsite ................................ Passed 0.60 sec test 196 Start 196: unit_test_qmpair 196: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_qmpair 196: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_qmpair 196: Test timeout computed to be: 10000000 -190: Running 2 test cases... -190: -190: *** No errors detected -190:  -181/244 Test #190: unit_test_regular_grid ............................. Passed 0.85 sec +191: Running 5 test cases... +191: +191: *** No errors detected +193: Running 6 test cases... +193: +193: *** No errors detected +191:  +182/244 Test #191: unit_test_orbitals ................................. Passed 1.08 sec test 197 Start 197: unit_test_qmstate 197: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_qmstate 197: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_qmstate 197: Test timeout computed to be: 10000000 -191: Running 5 test cases... -191: -191: *** No errors detected -191:  -182/244 Test #191: unit_test_orbitals ................................. Passed 1.06 sec +193:  +183/244 Test #193: unit_test_staticsite ............................... Passed 0.68 sec test 198 Start 198: unit_test_radial_euler_maclaurin_rule 198: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_radial_euler_maclaurin_rule 198: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_radial_euler_maclaurin_rule 198: Test timeout computed to be: 10000000 -193: Running 6 test cases... -193: -193: *** No errors detected -193:  -183/244 Test #193: unit_test_staticsite ............................... Passed 0.62 sec +195: Running 2 test cases... +195: +195: *** No errors detected +196: Running 1 test case... +196: +196: *** No errors detected +195:  +184/244 Test #195: unit_test_qmnblist ................................. Passed 0.56 sec test 199 Start 199: unit_test_rpa 199: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_rpa 199: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_rpa 199: Test timeout computed to be: 10000000 -196: Running 1 test case... -196: -196: *** No errors detected +197: Running 2 test cases... +197: +197: *** No errors detected +182: Running 2 test cases... +182: +182: *** No errors detected 196:  -195: Running 2 test cases... -195: -195: *** No errors detected -184/244 Test #196: unit_test_qmpair ................................... Passed 0.52 sec +185/244 Test #196: unit_test_qmpair ................................... Passed 0.56 sec test 200 Start 200: unit_test_rpa_h2p 200: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_rpa_h2p 200: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_rpa_h2p 200: Test timeout computed to be: 10000000 -195:  -185/244 Test #195: unit_test_qmnblist ................................. Passed 0.60 sec +197:  +182:  +186/244 Test #182: unit_test_eris ..................................... Passed 1.82 sec test 201 Start 201: unit_test_segment 201: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_segment 201: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_segment 201: Test timeout computed to be: 10000000 -197: Running 2 test cases... -197: -197: *** No errors detected -197:  -186/244 Test #197: unit_test_qmstate .................................. Passed 0.62 sec +187/244 Test #197: unit_test_qmstate .................................. Passed 0.54 sec test 202 Start 202: unit_test_aoshell 202: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_aoshell 202: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_aoshell 202: Test timeout computed to be: 10000000 -198: Running 1 test case... -198: -198: *** No errors detected -182: Running 2 test cases... -182: -182: *** No errors detected -198:  -182:  -187/244 Test #182: unit_test_eris ..................................... Passed 1.77 sec +189: Running 1 test case... +189: +189: *** No errors detected +189:  +188/244 Test #189: unit_test_vxc_grid ................................. Passed 1.82 sec test 203 Start 203: unit_test_sphere_lebedev_rule 203: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_sphere_lebedev_rule 203: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_sphere_lebedev_rule 203: Test timeout computed to be: 10000000 -188/244 Test #198: unit_test_radial_euler_maclaurin_rule .............. Passed 0.56 sec +198: Running 1 test case... +198: +198: *** No errors detected +198:  +189/244 Test #198: unit_test_radial_euler_maclaurin_rule .............. Passed 0.72 sec test 204 Start 204: unit_test_statetracker 204: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_statetracker 204: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_statetracker 204: Test timeout computed to be: 10000000 -189: Running 1 test case... -189: -189: *** No errors detected -189:  -189/244 Test #189: unit_test_vxc_grid ................................. Passed 1.87 sec +180: Running 1 test case... +180: +180: *** No errors detected +180:  +190/244 Test #180: unit_test_ecpaobasis ............................... Passed 2.26 sec test 205 Start 205: unit_test_symmetric_matrix @@ -31568,95 +31609,95 @@ 201: Running 2 test cases... 201: 201: *** No errors detected -202:  -190/244 Test #202: unit_test_aoshell .................................. Passed 0.48 sec +201:  +191/244 Test #201: unit_test_segment .................................. Passed 0.49 sec test 206 Start 206: unit_test_threecenter_dft 206: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_threecenter_dft 206: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_threecenter_dft 206: Test timeout computed to be: 10000000 -201:  -191/244 Test #201: unit_test_segment .................................. Passed 0.67 sec +202:  +192/244 Test #202: unit_test_aoshell .................................. Passed 0.48 sec test 207 Start 207: unit_test_threecenter_gwbse 207: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_threecenter_gwbse 207: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_threecenter_gwbse 207: Test timeout computed to be: 10000000 -180: Running 1 test case... -180: -180: *** No errors detected -180:  -192/244 Test #180: unit_test_ecpaobasis ............................... Passed 2.38 sec +205: Running 6 test cases... +205: +205: *** No errors detected +203: Running 4 test cases... +203: +203: *** No errors detected +200: Running 1 test case... +200: +200: *** No errors detected +205:  +193/244 Test #205: unit_test_symmetric_matrix ......................... Passed 0.49 sec test 208 Start 208: unit_test_topology 208: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_topology 208: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_topology 208: Test timeout computed to be: 10000000 -205: Running 6 test cases... -205: -205: *** No errors detected -205:  -193/244 Test #205: unit_test_symmetric_matrix ......................... Passed 0.35 sec +194: Running 1 test case... +194: +194: *** No errors detected +203:  +194/244 Test #203: unit_test_sphere_lebedev_rule ...................... Passed 0.71 sec test 209 Start 209: unit_test_sigma_exact 209: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_sigma_exact 209: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_sigma_exact 209: Test timeout computed to be: 10000000 -200: Running 1 test case... -200: -200: *** No errors detected -155: ..... [100%] -155: 5 passed in 1.86s -200:  -194/244 Test #200: unit_test_rpa_h2p .................................. Passed 1.12 sec +194:  +195/244 Test #194: unit_test_ppm ...................................... Passed 1.80 sec test 210 Start 210: unit_test_sigma_ppm 210: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_sigma_ppm 210: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_sigma_ppm 210: Test timeout computed to be: 10000000 -199: Running 2 test cases... -199: -199: *** No errors detected -204: Running 2 test cases... -204: -204: *** No errors detected -203: Running 4 test cases... -203: -203: *** No errors detected -204:  -195/244 Test #204: unit_test_statetracker ............................. Passed 0.82 sec +200:  +196/244 Test #200: unit_test_rpa_h2p .................................. Passed 0.99 sec test 211 Start 211: unit_test_sigma_cda 211: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_sigma_cda 211: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_sigma_cda 211: Test timeout computed to be: 10000000 -199:  -194: Running 1 test case... -194: -194: *** No errors detected -196/244 Test #199: unit_test_rpa ...................................... Passed 1.35 sec +155: ..... [100%] +155: 5 passed in 1.57s +204: Running 2 test cases... +204: +204: *** No errors detected +204:  +197/244 Test #204: unit_test_statetracker ............................. Passed 0.79 sec test 212 Start 212: unit_test_gw 212: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_gw 212: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_gw 212: Test timeout computed to be: 10000000 -203:  -194:  -197/244 Test #194: unit_test_ppm ...................................... Passed 1.90 sec +206: Running 1 test case... +206: +206: *** No errors detected +199: Running 2 test cases... +199: +199: *** No errors detected +206:  +198/244 Test #206: unit_test_threecenter_dft .......................... Passed 0.60 sec test 213 Start 213: unit_test_bse_operator 213: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_bse_operator 213: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_bse_operator 213: Test timeout computed to be: 10000000 -198/244 Test #203: unit_test_sphere_lebedev_rule ...................... Passed 0.95 sec +199:  +199/244 Test #199: unit_test_rpa ...................................... Passed 1.22 sec test 214 Start 214: unit_test_davidson @@ -31667,40 +31708,40 @@ 208: 208: *** No errors detected 208:  -199/244 Test #208: unit_test_topology ................................. Passed 0.43 sec +200/244 Test #208: unit_test_topology ................................. Passed 0.40 sec test 215 Start 215: unit_test_trustregion 215: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_trustregion 215: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_trustregion 215: Test timeout computed to be: 10000000 -206: Running 1 test case... -206: -206: *** No errors detected -206:  -200/244 Test #206: unit_test_threecenter_dft .......................... Passed 0.73 sec +207: Running 1 test case... +207: +207: *** No errors detected +207:  +201/244 Test #207: unit_test_threecenter_gwbse ........................ Passed 0.95 sec test 216 Start 216: unit_test_gnode 216: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_gnode 216: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_gnode 216: Test timeout computed to be: 10000000 +188: Running 1 test case... +188: +188: *** No errors detected 215: Running 1 test case... 215: 215: *** No errors detected -207: Running 1 test case... -207: -207: *** No errors detected -215:  -201/244 Test #215: unit_test_trustregion .............................. Passed 0.38 sec +188:  +202/244 Test #188: unit_test_vxc_potential ............................ Passed 3.35 sec test 217 Start 217: unit_test_vc2index 217: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_vc2index 217: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_vc2index 217: Test timeout computed to be: 10000000 -207:  -202/244 Test #207: unit_test_threecenter_gwbse ........................ Passed 1.02 sec +215:  +203/244 Test #215: unit_test_trustregion .............................. Passed 0.46 sec test 218 Start 218: unit_test_grid @@ -31711,14 +31752,14 @@ 217: 217: *** No errors detected 217:  -203/244 Test #217: unit_test_vc2index ................................. Passed 0.08 sec +204/244 Test #217: unit_test_vc2index ................................. Passed 0.07 sec test 219 Start 219: unit_test_segmentmapper 219: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_segmentmapper 219: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_segmentmapper 219: Test timeout computed to be: 10000000 -204/244 Test #155: unit_iie.py ........................................ Passed 3.85 sec +205/244 Test #155: unit_iie.py ........................................ Passed 4.34 sec test 220 Start 220: unit_test_eeinteractor @@ -31729,365 +31770,359 @@ 216: 216: *** No errors detected 216:  -205/244 Test #216: unit_test_gnode .................................... Passed 0.53 sec +206/244 Test #216: unit_test_gnode .................................... Passed 0.72 sec test 221 Start 221: unit_test_hist 221: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_hist 221: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_hist 221: Test timeout computed to be: 10000000 -188: Running 1 test case... -188: -188: *** No errors detected 209: Running 1 test case... 209: 209: *** No errors detected -188:  -206/244 Test #188: unit_test_vxc_potential ............................ Passed 3.49 sec +219: Running 3 test cases... +219: +219: *** No errors detected +218: Running 1 test case... +218: +218: *** No errors detected +209:  +207/244 Test #209: unit_test_sigma_exact .............................. Passed 1.39 sec test 222 Start 222: unit_test_qmfragment 222: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_qmfragment 222: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_qmfragment 222: Test timeout computed to be: 10000000 -209:  -207/244 Test #209: unit_test_sigma_exact .............................. Passed 1.27 sec +218:  +208/244 Test #218: unit_test_grid ..................................... Passed 0.59 sec test 223 Start 223: unit_test_jobtopology 223: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_jobtopology 223: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_jobtopology 223: Test timeout computed to be: 10000000 -218: Running 1 test case... -218: -218: *** No errors detected -219: Running 3 test cases... -219: -219: *** No errors detected -218:  -208/244 Test #218: unit_test_grid ..................................... Passed 0.54 sec +219:  +209/244 Test #219: unit_test_segmentmapper ............................ Passed 0.58 sec test 224 Start 224: unit_test_dipoledipoleinteraction 224: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_dipoledipoleinteraction 224: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_dipoledipoleinteraction 224: Test timeout computed to be: 10000000 -219:  -209/244 Test #219: unit_test_segmentmapper ............................ Passed 0.54 sec +210: Running 1 test case... +210: +210: *** No errors detected +210:  +210/244 Test #210: unit_test_sigma_ppm ................................ Passed 1.58 sec test 225 Start 225: unit_test_populationanalysis 225: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_populationanalysis 225: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_populationanalysis 225: Test timeout computed to be: 10000000 +220: Running 9 test cases... +220: +220: *** No errors detected 221: Running 1 test case... 221: 221: *** No errors detected 221:  -210/244 Test #221: unit_test_hist ..................................... Passed 0.56 sec +220:  +211/244 Test #220: unit_test_eeinteractor ............................. Passed 0.83 sec test 226 Start 226: unit_test_orca 226: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_orca 226: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_orca 226: Test timeout computed to be: 10000000 -222: Running 2 test cases... -222: -222: *** No errors detected -220: Running 9 test cases... -220: -220: *** No errors detected -223: Running 1 test case... -223: -223: *** No errors detected -222:  -211/244 Test #222: unit_test_qmfragment ............................... Passed 0.49 sec +212/244 Test #221: unit_test_hist ..................................... Passed 0.46 sec test 227 Start 227: unit_test_dftengine 227: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_dftengine 227: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_dftengine 227: Test timeout computed to be: 10000000 -220:  -212/244 Test #220: unit_test_eeinteractor ............................. Passed 0.86 sec +222: Running 2 test cases... +222: +222: *** No errors detected +223: Running 1 test case... +223: +223: *** No errors detected +223:  +213/244 Test #223: unit_test_jobtopology .............................. Passed 0.38 sec test 228 Start 228: unit_test_bsecoupling 228: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_bsecoupling 228: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_bsecoupling 228: Test timeout computed to be: 10000000 -223:  -213/244 Test #223: unit_test_jobtopology .............................. Passed 0.52 sec +222:  +214/244 Test #222: unit_test_qmfragment ............................... Passed 0.43 sec test 229 Start 229: unit_test_rate_engine 229: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_rate_engine 229: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_rate_engine 229: Test timeout computed to be: 10000000 -210: Running 1 test case... -210: -210: *** No errors detected -210:  -214/244 Test #210: unit_test_sigma_ppm ................................ Passed 1.62 sec +183: Running 1 test case... +183: +183: *** No errors detected +183:  +215/244 Test #183: unit_test_espfit ................................... Passed 4.64 sec test 230 Start 230: unit_test_DeltaQ_filter 230: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_DeltaQ_filter 230: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_DeltaQ_filter 230: Test timeout computed to be: 10000000 +213: Running 1 test case... +213: +213: *** No errors detected 226: Running 5 test cases... 226: orca 226: xtp -226: /build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles/orca/3-21G_small.xml -226: -226: *** No errors detected -226:  -215/244 Test #226: unit_test_orca ..................................... Passed 0.60 sec +213:  +216/244 Test #213: unit_test_bse_operator ............................. Passed 1.82 sec test 231 Start 231: unit_test_oscillatorstrength_filter 231: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_oscillatorstrength_filter 231: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_oscillatorstrength_filter 231: Test timeout computed to be: 10000000 -229: Running 2 test cases... -229: -229: *** No errors detected -229:  -216/244 Test #229: unit_test_rate_engine .............................. Passed 0.58 sec +226: /build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles/orca/3-21G_small.xml +226: +226: *** No errors detected +226:  +217/244 Test #226: unit_test_orca ..................................... Passed 0.38 sec test 232 Start 232: unit_test_localisation_filter 232: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_localisation_filter 232: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_localisation_filter 232: Test timeout computed to be: 10000000 -225: Running 2 test cases... -225: -225: *** No errors detected -225:  -217/244 Test #225: unit_test_populationanalysis ....................... Passed 1.03 sec +229: Running 2 test cases... +229: +229: *** No errors detected +229:  +218/244 Test #229: unit_test_rate_engine .............................. Passed 0.41 sec test 233 Start 233: unit_test_density_filter 233: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_density_filter 233: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_density_filter 233: Test timeout computed to be: 10000000 -230: Running 1 test case... -230: -230: *** No errors detected -213: Running 1 test case... -213: -213: *** No errors detected -230:  -218/244 Test #230: unit_test_DeltaQ_filter ............................ Passed 0.62 sec +225: Running 2 test cases... +225: +225: *** No errors detected +225:  +219/244 Test #225: unit_test_populationanalysis ....................... Passed 0.83 sec test 234 Start 234: unit_test_overlap_filter 234: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_overlap_filter 234: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_overlap_filter 234: Test timeout computed to be: 10000000 -213:  -219/244 Test #213: unit_test_bse_operator ............................. Passed 2.16 sec +230: Running 1 test case... +230: +230: *** No errors detected +224: Running 1 test case... +224: +224: *** No errors detected +230:  +220/244 Test #230: unit_test_DeltaQ_filter ............................ Passed 0.64 sec test 235 Start 235: unit_test_newton_rapson 235: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_newton_rapson 235: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_newton_rapson 235: Test timeout computed to be: 10000000 -183: Running 1 test case... -183: -183: *** No errors detected -235: Running 1 test case... -235: -235: *** No errors detected -235:  -220/244 Test #235: unit_test_newton_rapson ............................ Passed 0.06 sec +224:  +221/244 Test #224: unit_test_dipoledipoleinteraction .................. Passed 1.19 sec test 236 Start 236: unit_test_indexparser 236: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_indexparser 236: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_indexparser 236: Test timeout computed to be: 10000000 -183:  -224: Running 1 test case... -224: -224: *** No errors detected -221/244 Test #183: unit_test_espfit ................................... Passed 4.92 sec +235: Running 1 test case... +235: +235: *** No errors detected +235:  +222/244 Test #235: unit_test_newton_rapson ............................ Passed 0.06 sec test 237 Start 237: unit_test_orbreorder 237: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_orbreorder 237: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_orbreorder 237: Test timeout computed to be: 10000000 -224:  -222/244 Test #224: unit_test_dipoledipoleinteraction .................. Passed 1.27 sec +231: Running 1 test case... +231: +231: *** No errors detected +232: Running 1 test case... +232: +232: *** No errors detected +232:  +223/244 Test #232: unit_test_localisation_filter ...................... Passed 0.62 sec test 238 Start 238: unit_test_molden 238: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_molden 238: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_molden 238: Test timeout computed to be: 10000000 -231: Running 1 test case... -231: -231: *** No errors detected 231:  -223/244 Test #231: unit_test_oscillatorstrength_filter ................ Passed 0.66 sec +224/244 Test #231: unit_test_oscillatorstrength_filter ................ Passed 0.74 sec test 239 Start 239: unit_test_gaussianwriter 239: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_gaussianwriter 239: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_gaussianwriter 239: Test timeout computed to be: 10000000 -236: Running 3 test cases... -236: -236: *** No errors detected -236:  -224/244 Test #236: unit_test_indexparser .............................. Passed 0.42 sec +187: Running 2 test cases... +187: +187: *** No errors detected +233: Running 1 test case... +233: +233: *** No errors detected +187:  +225/244 Test #187: unit_test_densityintegration ....................... Passed 5.51 sec test 240 Start 240: unit_test_incrementalfockbuilder 240: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_incrementalfockbuilder 240: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_incrementalfockbuilder 240: Test timeout computed to be: 10000000 -232: Running 1 test case... -232: -232: *** No errors detected -233: Running 1 test case... -233: -233: *** No errors detected -232:  -225/244 Test #232: unit_test_localisation_filter ...................... Passed 0.68 sec +233:  +226/244 Test #233: unit_test_density_filter ........................... Passed 0.72 sec test 241 Start 241: unit_test_parallelism 241: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_parallelism 241: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_parallelism 241: Test timeout computed to be: 10000000 +212: Running 2 test cases... +212: +212: *** No errors detected 240: Running 2 test cases... 240: 240: *** No errors detected -233:  -226/244 Test #233: unit_test_density_filter ........................... Passed 0.64 sec +240:  +227/244 Test #240: unit_test_incrementalfockbuilder ................... Passed 0.08 sec test 242 Start 242: unit_test_anderson 242: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_anderson 242: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_anderson 242: Test timeout computed to be: 10000000 -240:  -227/244 Test #240: unit_test_incrementalfockbuilder ................... Passed 0.11 sec +212:  +236: Running 3 test cases... +236: +236: *** No errors detected +228/244 Test #212: unit_test_gw ....................................... Passed 2.89 sec test 243 Start 243: unit_test_gaussian_quadratures 243: Test command: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_gaussian_quadratures 243: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_gaussian_quadratures 243: Test timeout computed to be: 10000000 -237: Running 1 test case... -237: -237: *** No errors detected 241: Running 1 test case... 241: 241: *** No errors detected 241:  -228/244 Test #241: unit_test_parallelism .............................. Passed 0.08 sec +229/244 Test #241: unit_test_parallelism .............................. Passed 0.12 sec test 244 Start 244: regression_xtp-tutorial_UninstallExists 244: Test command: /usr/bin/cmake "-DFileToCheck=/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp-tutorials/cmake_uninstall.cmake" "-P" "/build/reproducible-path/votca-2022.1/xtp-tutorials/CMakeModules/FileExists.cmake" 244: Working Directory: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp-tutorials 244: Test timeout computed to be: 10000000 -212: Running 2 test cases... -212: -212: *** No errors detected -212:  -229/244 Test #212: unit_test_gw ....................................... Passed 2.87 sec +236:  +230/244 Test #236: unit_test_indexparser .............................. Passed 0.47 sec +237: Running 1 test case... +237: +237: *** No errors detected 237:  -230/244 Test #237: unit_test_orbreorder ............................... Passed 0.60 sec +231/244 Test #237: unit_test_orbreorder ............................... Passed 0.51 sec 244: /build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu/xtp-tutorials/cmake_uninstall.cmake exists. -231/244 Test #244: regression_xtp-tutorial_UninstallExists ............ Passed 0.09 sec -187: Running 2 test cases... -187: -187: *** No errors detected -242: Running 1 test case... -242: -242: *** No errors detected +232/244 Test #244: regression_xtp-tutorial_UninstallExists ............ Passed 0.13 sec 243: Running 4 test cases... 243: 243: *** No errors detected -187:  -232/244 Test #187: unit_test_densityintegration ....................... Passed 5.67 sec +228: Running 1 test case... +228: +228: *** No errors detected +228:  +233/244 Test #228: unit_test_bsecoupling .............................. Passed 1.54 sec 243:  -233/244 Test #243: unit_test_gaussian_quadratures ..................... Passed 0.32 sec +234/244 Test #243: unit_test_gaussian_quadratures ..................... Passed 0.31 sec 239: Running 1 test case... 239: 239: *** No errors detected -242:  -234/244 Test #242: unit_test_anderson ................................. Passed 0.39 sec +242: Running 1 test case... +242: +242: *** No errors detected 239:  -235/244 Test #239: unit_test_gaussianwriter ........................... Passed 0.61 sec -228: Running 1 test case... -228: -228: *** No errors detected +235/244 Test #239: unit_test_gaussianwriter ........................... Passed 0.64 sec +242:  +236/244 Test #242: unit_test_anderson ................................. Passed 0.43 sec +168: Running 3 test cases... +168: +168: *** No errors detected 238: Running 2 test cases... 238: /build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles/molden/def2-tzvp.xml -228:  -236/244 Test #228: unit_test_bsecoupling .............................. Passed 1.84 sec +168:  +237/244 Test #168: unit_test_aopotential .............................. Passed 6.71 sec 214: Running 7 test cases... 214: -214: ERROR 2025-2-13 4:14:29 Davidson Solver using 16 threads. -214: ERROR 2025-2-13 4:14:29 Tolerance : 0.0001 -214: ERROR 2025-2-13 4:14:29 DPR Correction -214: ERROR 2025-2-13 4:14:29 Matrix size : 400x400 -214: ERROR 2025-2-13 4:14:29 iter Search Space Norm -214: ERROR 2025-2-13 4:14:29 0 20 1.63e-04 50.00% converged -214: ERROR 2025-2-13 4:14:30 1 30 1.68e-09 100.00% converged -214: ERROR 2025-2-13 4:14:30 Davidson converged after 1 iterations. -214: ERROR 2025-2-13 4:14:30----------------------------------- -214: ERROR 2025-2-13 4:14:30- Davidson ran for 0.341281secs. -214: ERROR 2025-2-13 4:14:30----------------------------------- +214: ERROR 2024-1-13 0:34:1 Davidson Solver using 15 threads. +214: ERROR 2024-1-13 0:34:1 Tolerance : 0.0001 +214: ERROR 2024-1-13 0:34:1 DPR Correction +214: ERROR 2024-1-13 0:34:1 Matrix size : 400x400 +214: ERROR 2024-1-13 0:34:1 iter Search Space Norm +214: ERROR 2024-1-13 0:34:1 0 20 1.63e-04 50.00% converged +214: ERROR 2024-1-13 0:34:1 1 30 1.68e-09 100.00% converged +214: ERROR 2024-1-13 0:34:1 Davidson converged after 1 iterations. +214: ERROR 2024-1-13 0:34:1----------------------------------- +214: ERROR 2024-1-13 0:34:1- Davidson ran for 0.385382secs. +214: ERROR 2024-1-13 0:34:1----------------------------------- 234: Running 1 test case... 234: 234: *** No errors detected 234:  -237/244 Test #234: unit_test_overlap_filter ........................... Passed 1.59 sec -168: Running 3 test cases... -168: -168: *** No errors detected -168:  -238/244 Test #168: unit_test_aopotential .............................. Passed 6.98 sec +238/244 Test #234: unit_test_overlap_filter ........................... Passed 1.67 sec 238: /build/reproducible-path/votca-2022.1/xtp/src/tests/DataFiles/molden/def2-tzvp.xml +153: histogram created using 4560 data-rows, written to file_interactions.txt 238: 238: *** No errors detected 238:  -239/244 Test #238: unit_test_molden ................................... Passed 3.26 sec -153: histogram created using 4560 data-rows, written to file_interactions.txt +239/244 Test #238: unit_test_molden ................................... Passed 2.82 sec 214: -214: ERROR 2025-2-13 4:14:31 Davidson Solver using 16 threads. -214: ERROR 2025-2-13 4:14:31 Tolerance : 0.0001 -214: ERROR 2025-2-13 4:14:31 DPR Correction -214: ERROR 2025-2-13 4:14:31 Matrix size : 240x240 -214: ERROR 2025-2-13 4:14:31 iter Search Space Norm -214: ERROR 2025-2-13 4:14:31 0 10 9.85e-02 0.00% converged -214: ERROR 2025-2-13 4:14:31 1 17 1.23e-03 0.00% converged -214: ERROR 2025-2-13 4:14:32 2 24 2.34e-05 100.00% converged -214: ERROR 2025-2-13 4:14:32 Davidson converged after 2 iterations. -214: ERROR 2025-2-13 4:14:32----------------------------------- -214: ERROR 2025-2-13 4:14:32- Davidson ran for 0.437776secs. -214: ERROR 2025-2-13 4:14:32----------------------------------- +214: ERROR 2024-1-13 0:34:2 Davidson Solver using 15 threads. +214: ERROR 2024-1-13 0:34:2 Tolerance : 0.0001 +214: ERROR 2024-1-13 0:34:2 DPR Correction +214: ERROR 2024-1-13 0:34:2 Matrix size : 240x240 +214: ERROR 2024-1-13 0:34:2 iter Search Space Norm +214: ERROR 2024-1-13 0:34:2 0 10 9.85e-02 0.00% converged +214: ERROR 2024-1-13 0:34:3 1 17 1.23e-03 0.00% converged +214: ERROR 2024-1-13 0:34:3 2 24 2.34e-05 100.00% converged +214: ERROR 2024-1-13 0:34:3 Davidson converged after 2 iterations. +214: ERROR 2024-1-13 0:34:3----------------------------------- +214: ERROR 2024-1-13 0:34:3- Davidson ran for 0.295006secs. +214: ERROR 2024-1-13 0:34:3----------------------------------- 214: *** No errors detected 214:  -240/244 Test #214: unit_test_davidson ................................. Passed 6.52 sec +240/244 Test #214: unit_test_davidson ................................. Passed 6.00 sec 211: Running 1 test case... 211: 211: *** No errors detected 211:  -241/244 Test #211: unit_test_sigma_cda ................................ Passed 7.52 sec +241/244 Test #211: unit_test_sigma_cda ................................ Passed 7.97 sec 153: histogram created using 4560 data-rows, written to file_interactions.txt 176: Running 1 test case... 176: 176: *** No errors detected 176:  -242/244 Test #176: unit_test_bse ...................................... Passed 16.01 sec -153: histogram created using 4560 data-rows, written to file_interactions.txt +242/244 Test #176: unit_test_bse ...................................... Passed 16.79 sec 153: histogram created using 4560 data-rows, written to file_interactions.txt 153: histogram created using 4560 data-rows, written to file_interactions.txt 153: histogram created using 4560 data-rows, written to file_interactions.txt @@ -32096,32 +32131,33 @@ 227: 227: *** No errors detected 227:  -243/244 Test #227: unit_test_dftengine ................................ Passed 19.33 sec +243/244 Test #227: unit_test_dftengine ................................ Passed 22.62 sec +153: histogram created using 4560 data-rows, written to file_interactions.txt 153: histogram created using 4560 data-rows, written to file_interactions.txt 153: 153: *** No errors detected 153:  -244/244 Test #153: unit_test_tabulatedpotential ....................... Passed 25.56 sec +244/244 Test #153: unit_test_tabulatedpotential ....................... Passed 30.53 sec 100% tests passed, 0 tests failed out of 244 Label Time Summary: -csg = 62.73 sec*proc (123 tests) +csg = 69.65 sec*proc (123 tests) csg-tutorials = 0.25 sec*proc (1 test) -csgapps = 1.86 sec*proc (7 tests) -integration = 23.23 sec*proc (83 tests) -tools = 36.03 sec*proc (141 tests) -unit = 168.89 sec*proc (138 tests) -votca = 197.68 sec*proc (243 tests) -xtp = 128.08 sec*proc (85 tests) -xtp-tutorials = 0.09 sec*proc (1 test) +csgapps = 1.83 sec*proc (7 tests) +integration = 24.73 sec*proc (83 tests) +tools = 37.51 sec*proc (141 tests) +unit = 175.82 sec*proc (138 tests) +votca = 206.11 sec*proc (243 tests) +xtp = 129.66 sec*proc (85 tests) +xtp-tutorials = 0.13 sec*proc (1 test) -Total Test time (real) = 28.03 sec +Total Test time (real) = 33.25 sec make[1]: Leaving directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' create-stamp debian/debhelper-build-stamp dh_prep dh_auto_install - cd obj-x86_64-linux-gnu && make -j16 install DESTDIR=/build/reproducible-path/votca-2022.1/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" + cd obj-x86_64-linux-gnu && make -j15 install DESTDIR=/build/reproducible-path/votca-2022.1/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu' /usr/bin/cmake -S/build/reproducible-path/votca-2022.1 -B/build/reproducible-path/votca-2022.1/obj-x86_64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 preinstall @@ -34686,13 +34722,13 @@ dpkg-gencontrol: warning: Depends field of package votca-tutorials: substitution variable ${python3:Depends} used, but is not defined dh_md5sums dh_builddeb -dpkg-deb: building package 'votca-data' in '../votca-data_2022.1-1_all.deb'. -dpkg-deb: building package 'libvotca-2022' in '../libvotca-2022_2022.1-1_amd64.deb'. -dpkg-deb: building package 'libvotca-2022-dbgsym' in '../libvotca-2022-dbgsym_2022.1-1_amd64.deb'. -dpkg-deb: building package 'libvotca-dev' in '../libvotca-dev_2022.1-1_amd64.deb'. dpkg-deb: building package 'votca-tutorials' in '../votca-tutorials_2022.1-1_all.deb'. +dpkg-deb: building package 'libvotca-2022' in '../libvotca-2022_2022.1-1_amd64.deb'. dpkg-deb: building package 'votca-dbgsym' in '../votca-dbgsym_2022.1-1_amd64.deb'. +dpkg-deb: building package 'votca-data' in '../votca-data_2022.1-1_all.deb'. dpkg-deb: building package 'votca' in '../votca_2022.1-1_amd64.deb'. +dpkg-deb: building package 'libvotca-2022-dbgsym' in '../libvotca-2022-dbgsym_2022.1-1_amd64.deb'. +dpkg-deb: building package 'libvotca-dev' in '../libvotca-dev_2022.1-1_amd64.deb'. dpkg-genbuildinfo --build=binary -O../votca_2022.1-1_amd64.buildinfo dpkg-genchanges --build=binary -O../votca_2022.1-1_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) @@ -34700,12 +34736,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: including full source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/1295862/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/1295862/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/3672570 and its subdirectories -I: Current time: Thu Feb 13 04:20:31 -12 2025 -I: pbuilder-time-stamp: 1739463631 +I: removing directory /srv/workspace/pbuilder/1295862 and its subdirectories +I: Current time: Sat Jan 13 00:41:14 +14 2024 +I: pbuilder-time-stamp: 1705056074