Diff of the two buildlogs:

--
--- b1/build.log	2023-04-22 04:24:56.303515454 +0000
+++ b2/build.log	2023-04-22 04:40:15.130796892 +0000
@@ -1,6 +1,6 @@
 I: pbuilder: network access will be disabled during build
-I: Current time: Fri Apr 21 16:15:57 -12 2023
-I: pbuilder-time-stamp: 1682136957
+I: Current time: Sat May 25 00:48:02 +14 2024
+I: pbuilder-time-stamp: 1716547682
 I: Building the build Environment
 I: extracting base tarball [/var/cache/pbuilder/bookworm-reproducible-base.tgz]
 I: copying local configuration
@@ -16,7 +16,7 @@
 I: copying [./snpsift_5.1+dfsg2.orig.tar.xz]
 I: copying [./snpsift_5.1+dfsg2-2.debian.tar.xz]
 I: Extracting source
-gpgv: Signature made Sun Feb 27 01:43:28 2022 -12
+gpgv: Signature made Mon Feb 28 03:43:28 2022 +14
 gpgv:                using RSA key 33CB284313E90BD27DCB4523600316A6DC277476
 gpgv: Can't check signature: No public key
 dpkg-source: warning: cannot verify inline signature for ./snpsift_5.1+dfsg2-2.dsc: no acceptable signature found
@@ -30,135 +30,167 @@
 dpkg-source: info: applying test_scope_for_junit.patch
 I: Not using root during the build.
 I: Installing the build-deps
-I: user script /srv/workspace/pbuilder/2615716/tmp/hooks/D02_print_environment starting
+I: user script /srv/workspace/pbuilder/3683552/tmp/hooks/D01_modify_environment starting
+debug: Running on ionos5-amd64.
+I: Changing host+domainname to test build reproducibility
+I: Adding a custom variable just for the fun of it...
+I: Changing /bin/sh to bash
+'/bin/sh' -> '/bin/bash'
+lrwxrwxrwx 1 root root 9 May 25 00:48 /bin/sh -> /bin/bash
+I: Setting pbuilder2's login shell to /bin/bash
+I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other
+I: user script /srv/workspace/pbuilder/3683552/tmp/hooks/D01_modify_environment finished
+I: user script /srv/workspace/pbuilder/3683552/tmp/hooks/D02_print_environment starting
 I: set
-  BUILDDIR='/build'
-  BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other'
-  BUILDUSERNAME='pbuilder1'
-  BUILD_ARCH='amd64'
-  DEBIAN_FRONTEND='noninteractive'
-  DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=15'
-  DISTRIBUTION='bookworm'
-  HOME='/root'
-  HOST_ARCH='amd64'
+  BASH=/bin/sh
+  BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath
+  BASH_ALIASES=()
+  BASH_ARGC=()
+  BASH_ARGV=()
+  BASH_CMDS=()
+  BASH_LINENO=([0]="12" [1]="0")
+  BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:.
+  BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment")
+  BASH_VERSINFO=([0]="5" [1]="2" [2]="15" [3]="1" [4]="release" [5]="x86_64-pc-linux-gnu")
+  BASH_VERSION='5.2.15(1)-release'
+  BUILDDIR=/build
+  BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other'
+  BUILDUSERNAME=pbuilder2
+  BUILD_ARCH=amd64
+  DEBIAN_FRONTEND=noninteractive
+  DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=16'
+  DIRSTACK=()
+  DISTRIBUTION=bookworm
+  EUID=0
+  FUNCNAME=([0]="Echo" [1]="main")
+  GROUPS=()
+  HOME=/root
+  HOSTNAME=i-capture-the-hostname
+  HOSTTYPE=x86_64
+  HOST_ARCH=amd64
   IFS=' 	
   '
-  INVOCATION_ID='e53eaf2c3b1447698fe4a5e6ef7ff74f'
-  LANG='C'
-  LANGUAGE='en_US:en'
-  LC_ALL='C'
-  MAIL='/var/mail/root'
-  OPTIND='1'
-  PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games'
-  PBCURRENTCOMMANDLINEOPERATION='build'
-  PBUILDER_OPERATION='build'
-  PBUILDER_PKGDATADIR='/usr/share/pbuilder'
-  PBUILDER_PKGLIBDIR='/usr/lib/pbuilder'
-  PBUILDER_SYSCONFDIR='/etc'
-  PPID='2615716'
-  PS1='# '
-  PS2='> '
+  INVOCATION_ID=612691248017461bb0454dacaaa70a01
+  LANG=C
+  LANGUAGE=et_EE:et
+  LC_ALL=C
+  MACHTYPE=x86_64-pc-linux-gnu
+  MAIL=/var/mail/root
+  OPTERR=1
+  OPTIND=1
+  OSTYPE=linux-gnu
+  PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path
+  PBCURRENTCOMMANDLINEOPERATION=build
+  PBUILDER_OPERATION=build
+  PBUILDER_PKGDATADIR=/usr/share/pbuilder
+  PBUILDER_PKGLIBDIR=/usr/lib/pbuilder
+  PBUILDER_SYSCONFDIR=/etc
+  PIPESTATUS=([0]="0")
+  POSIXLY_CORRECT=y
+  PPID=3683552
   PS4='+ '
-  PWD='/'
-  SHELL='/bin/bash'
-  SHLVL='2'
-  SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.nAYN95Cx/pbuilderrc_Nse5 --distribution bookworm --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bookworm-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.nAYN95Cx/b1 --logfile b1/build.log snpsift_5.1+dfsg2-2.dsc'
-  SUDO_GID='111'
-  SUDO_UID='106'
-  SUDO_USER='jenkins'
-  TERM='unknown'
-  TZ='/usr/share/zoneinfo/Etc/GMT+12'
-  USER='root'
-  _='/usr/bin/systemd-run'
-  http_proxy='http://78.137.99.97:3128'
+  PWD=/
+  SHELL=/bin/bash
+  SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix
+  SHLVL=3
+  SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.nAYN95Cx/pbuilderrc_UpoM --distribution bookworm --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bookworm-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.nAYN95Cx/b2 --logfile b2/build.log --extrapackages usrmerge snpsift_5.1+dfsg2-2.dsc'
+  SUDO_GID=110
+  SUDO_UID=105
+  SUDO_USER=jenkins
+  TERM=unknown
+  TZ=/usr/share/zoneinfo/Etc/GMT-14
+  UID=0
+  USER=root
+  _='I: set'
+  http_proxy=http://85.184.249.68:3128
 I: uname -a
-  Linux ionos11-amd64 5.10.0-21-amd64 #1 SMP Debian 5.10.162-1 (2023-01-21) x86_64 GNU/Linux
+  Linux i-capture-the-hostname 6.1.0-0.deb11.5-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.12-1~bpo11+1 (2023-03-05) x86_64 GNU/Linux
 I: ls -l /bin
   total 5632
-  -rwxr-xr-x 1 root root 1265648 Feb 12 08:05 bash
-  -rwxr-xr-x 3 root root   39224 Sep 18  2022 bunzip2
-  -rwxr-xr-x 3 root root   39224 Sep 18  2022 bzcat
-  lrwxrwxrwx 1 root root       6 Sep 18  2022 bzcmp -> bzdiff
-  -rwxr-xr-x 1 root root    2225 Sep 18  2022 bzdiff
-  lrwxrwxrwx 1 root root       6 Sep 18  2022 bzegrep -> bzgrep
-  -rwxr-xr-x 1 root root    4893 Nov 27  2021 bzexe
-  lrwxrwxrwx 1 root root       6 Sep 18  2022 bzfgrep -> bzgrep
-  -rwxr-xr-x 1 root root    3775 Sep 18  2022 bzgrep
-  -rwxr-xr-x 3 root root   39224 Sep 18  2022 bzip2
-  -rwxr-xr-x 1 root root   14568 Sep 18  2022 bzip2recover
-  lrwxrwxrwx 1 root root       6 Sep 18  2022 bzless -> bzmore
-  -rwxr-xr-x 1 root root    1297 Sep 18  2022 bzmore
-  -rwxr-xr-x 1 root root   44016 Sep 20  2022 cat
-  -rwxr-xr-x 1 root root   68656 Sep 20  2022 chgrp
-  -rwxr-xr-x 1 root root   64496 Sep 20  2022 chmod
-  -rwxr-xr-x 1 root root   72752 Sep 20  2022 chown
-  -rwxr-xr-x 1 root root  151152 Sep 20  2022 cp
-  -rwxr-xr-x 1 root root  125640 Jan  5 01:20 dash
-  -rwxr-xr-x 1 root root  121904 Sep 20  2022 date
-  -rwxr-xr-x 1 root root   89240 Sep 20  2022 dd
-  -rwxr-xr-x 1 root root  102200 Sep 20  2022 df
-  -rwxr-xr-x 1 root root  151344 Sep 20  2022 dir
-  -rwxr-xr-x 1 root root   88656 Mar 22 22:02 dmesg
-  lrwxrwxrwx 1 root root       8 Dec 19 01:33 dnsdomainname -> hostname
-  lrwxrwxrwx 1 root root       8 Dec 19 01:33 domainname -> hostname
-  -rwxr-xr-x 1 root root   43856 Sep 20  2022 echo
-  -rwxr-xr-x 1 root root      41 Jan 24 02:43 egrep
-  -rwxr-xr-x 1 root root   35664 Sep 20  2022 false
-  -rwxr-xr-x 1 root root      41 Jan 24 02:43 fgrep
-  -rwxr-xr-x 1 root root   85600 Mar 22 22:02 findmnt
-  -rwsr-xr-x 1 root root   35128 Mar 22 20:35 fusermount
-  -rwxr-xr-x 1 root root  203152 Jan 24 02:43 grep
-  -rwxr-xr-x 2 root root    2346 Apr  9  2022 gunzip
-  -rwxr-xr-x 1 root root    6447 Apr  9  2022 gzexe
-  -rwxr-xr-x 1 root root   98136 Apr  9  2022 gzip
-  -rwxr-xr-x 1 root root   22680 Dec 19 01:33 hostname
-  -rwxr-xr-x 1 root root   72824 Sep 20  2022 ln
-  -rwxr-xr-x 1 root root   53024 Mar 23 00:40 login
-  -rwxr-xr-x 1 root root  151344 Sep 20  2022 ls
-  -rwxr-xr-x 1 root root  207168 Mar 22 22:02 lsblk
-  -rwxr-xr-x 1 root root   97552 Sep 20  2022 mkdir
-  -rwxr-xr-x 1 root root   72912 Sep 20  2022 mknod
-  -rwxr-xr-x 1 root root   43952 Sep 20  2022 mktemp
-  -rwxr-xr-x 1 root root   59712 Mar 22 22:02 more
-  -rwsr-xr-x 1 root root   59704 Mar 22 22:02 mount
-  -rwxr-xr-x 1 root root   18744 Mar 22 22:02 mountpoint
-  -rwxr-xr-x 1 root root  142968 Sep 20  2022 mv
-  lrwxrwxrwx 1 root root       8 Dec 19 01:33 nisdomainname -> hostname
-  lrwxrwxrwx 1 root root      14 Apr  2 18:25 pidof -> /sbin/killall5
-  -rwxr-xr-x 1 root root   43952 Sep 20  2022 pwd
-  lrwxrwxrwx 1 root root       4 Feb 12 08:05 rbash -> bash
-  -rwxr-xr-x 1 root root   52112 Sep 20  2022 readlink
-  -rwxr-xr-x 1 root root   72752 Sep 20  2022 rm
-  -rwxr-xr-x 1 root root   56240 Sep 20  2022 rmdir
-  -rwxr-xr-x 1 root root   27560 Nov  2 04:31 run-parts
-  -rwxr-xr-x 1 root root  126424 Jan  5 07:55 sed
-  lrwxrwxrwx 1 root root       4 Jan  5 01:20 sh -> dash
-  -rwxr-xr-x 1 root root   43888 Sep 20  2022 sleep
-  -rwxr-xr-x 1 root root   85008 Sep 20  2022 stty
-  -rwsr-xr-x 1 root root   72000 Mar 22 22:02 su
-  -rwxr-xr-x 1 root root   39824 Sep 20  2022 sync
-  -rwxr-xr-x 1 root root  531984 Apr  6 02:25 tar
-  -rwxr-xr-x 1 root root   14520 Nov  2 04:31 tempfile
-  -rwxr-xr-x 1 root root  109616 Sep 20  2022 touch
-  -rwxr-xr-x 1 root root   35664 Sep 20  2022 true
-  -rwxr-xr-x 1 root root   14568 Mar 22 20:35 ulockmgr_server
-  -rwsr-xr-x 1 root root   35128 Mar 22 22:02 umount
-  -rwxr-xr-x 1 root root   43888 Sep 20  2022 uname
-  -rwxr-xr-x 2 root root    2346 Apr  9  2022 uncompress
-  -rwxr-xr-x 1 root root  151344 Sep 20  2022 vdir
-  -rwxr-xr-x 1 root root   72024 Mar 22 22:02 wdctl
-  lrwxrwxrwx 1 root root       8 Dec 19 01:33 ypdomainname -> hostname
-  -rwxr-xr-x 1 root root    1984 Apr  9  2022 zcat
-  -rwxr-xr-x 1 root root    1678 Apr  9  2022 zcmp
-  -rwxr-xr-x 1 root root    6460 Apr  9  2022 zdiff
-  -rwxr-xr-x 1 root root      29 Apr  9  2022 zegrep
-  -rwxr-xr-x 1 root root      29 Apr  9  2022 zfgrep
-  -rwxr-xr-x 1 root root    2081 Apr  9  2022 zforce
-  -rwxr-xr-x 1 root root    8103 Apr  9  2022 zgrep
-  -rwxr-xr-x 1 root root    2206 Apr  9  2022 zless
-  -rwxr-xr-x 1 root root    1842 Apr  9  2022 zmore
-  -rwxr-xr-x 1 root root    4577 Apr  9  2022 znew
-I: user script /srv/workspace/pbuilder/2615716/tmp/hooks/D02_print_environment finished
+  -rwxr-xr-x 1 root root 1265648 Feb 13  2023 bash
+  -rwxr-xr-x 3 root root   39224 Sep 19  2022 bunzip2
+  -rwxr-xr-x 3 root root   39224 Sep 19  2022 bzcat
+  lrwxrwxrwx 1 root root       6 Sep 19  2022 bzcmp -> bzdiff
+  -rwxr-xr-x 1 root root    2225 Sep 19  2022 bzdiff
+  lrwxrwxrwx 1 root root       6 Sep 19  2022 bzegrep -> bzgrep
+  -rwxr-xr-x 1 root root    4893 Nov 28  2021 bzexe
+  lrwxrwxrwx 1 root root       6 Sep 19  2022 bzfgrep -> bzgrep
+  -rwxr-xr-x 1 root root    3775 Sep 19  2022 bzgrep
+  -rwxr-xr-x 3 root root   39224 Sep 19  2022 bzip2
+  -rwxr-xr-x 1 root root   14568 Sep 19  2022 bzip2recover
+  lrwxrwxrwx 1 root root       6 Sep 19  2022 bzless -> bzmore
+  -rwxr-xr-x 1 root root    1297 Sep 19  2022 bzmore
+  -rwxr-xr-x 1 root root   44016 Sep 21  2022 cat
+  -rwxr-xr-x 1 root root   68656 Sep 21  2022 chgrp
+  -rwxr-xr-x 1 root root   64496 Sep 21  2022 chmod
+  -rwxr-xr-x 1 root root   72752 Sep 21  2022 chown
+  -rwxr-xr-x 1 root root  151152 Sep 21  2022 cp
+  -rwxr-xr-x 1 root root  125640 Jan  6  2023 dash
+  -rwxr-xr-x 1 root root  121904 Sep 21  2022 date
+  -rwxr-xr-x 1 root root   89240 Sep 21  2022 dd
+  -rwxr-xr-x 1 root root  102200 Sep 21  2022 df
+  -rwxr-xr-x 1 root root  151344 Sep 21  2022 dir
+  -rwxr-xr-x 1 root root   88656 Mar 24  2023 dmesg
+  lrwxrwxrwx 1 root root       8 Dec 20  2022 dnsdomainname -> hostname
+  lrwxrwxrwx 1 root root       8 Dec 20  2022 domainname -> hostname
+  -rwxr-xr-x 1 root root   43856 Sep 21  2022 echo
+  -rwxr-xr-x 1 root root      41 Jan 25  2023 egrep
+  -rwxr-xr-x 1 root root   35664 Sep 21  2022 false
+  -rwxr-xr-x 1 root root      41 Jan 25  2023 fgrep
+  -rwxr-xr-x 1 root root   85600 Mar 24  2023 findmnt
+  -rwsr-xr-x 1 root root   35128 Mar 23  2023 fusermount
+  -rwxr-xr-x 1 root root  203152 Jan 25  2023 grep
+  -rwxr-xr-x 2 root root    2346 Apr 10  2022 gunzip
+  -rwxr-xr-x 1 root root    6447 Apr 10  2022 gzexe
+  -rwxr-xr-x 1 root root   98136 Apr 10  2022 gzip
+  -rwxr-xr-x 1 root root   22680 Dec 20  2022 hostname
+  -rwxr-xr-x 1 root root   72824 Sep 21  2022 ln
+  -rwxr-xr-x 1 root root   53024 Mar 24  2023 login
+  -rwxr-xr-x 1 root root  151344 Sep 21  2022 ls
+  -rwxr-xr-x 1 root root  207168 Mar 24  2023 lsblk
+  -rwxr-xr-x 1 root root   97552 Sep 21  2022 mkdir
+  -rwxr-xr-x 1 root root   72912 Sep 21  2022 mknod
+  -rwxr-xr-x 1 root root   43952 Sep 21  2022 mktemp
+  -rwxr-xr-x 1 root root   59712 Mar 24  2023 more
+  -rwsr-xr-x 1 root root   59704 Mar 24  2023 mount
+  -rwxr-xr-x 1 root root   18744 Mar 24  2023 mountpoint
+  -rwxr-xr-x 1 root root  142968 Sep 21  2022 mv
+  lrwxrwxrwx 1 root root       8 Dec 20  2022 nisdomainname -> hostname
+  lrwxrwxrwx 1 root root      14 Apr  3  2023 pidof -> /sbin/killall5
+  -rwxr-xr-x 1 root root   43952 Sep 21  2022 pwd
+  lrwxrwxrwx 1 root root       4 Feb 13  2023 rbash -> bash
+  -rwxr-xr-x 1 root root   52112 Sep 21  2022 readlink
+  -rwxr-xr-x 1 root root   72752 Sep 21  2022 rm
+  -rwxr-xr-x 1 root root   56240 Sep 21  2022 rmdir
+  -rwxr-xr-x 1 root root   27560 Nov  3  2022 run-parts
+  -rwxr-xr-x 1 root root  126424 Jan  6  2023 sed
+  lrwxrwxrwx 1 root root       9 May 25 00:48 sh -> /bin/bash
+  -rwxr-xr-x 1 root root   43888 Sep 21  2022 sleep
+  -rwxr-xr-x 1 root root   85008 Sep 21  2022 stty
+  -rwsr-xr-x 1 root root   72000 Mar 24  2023 su
+  -rwxr-xr-x 1 root root   39824 Sep 21  2022 sync
+  -rwxr-xr-x 1 root root  531984 Apr  7  2023 tar
+  -rwxr-xr-x 1 root root   14520 Nov  3  2022 tempfile
+  -rwxr-xr-x 1 root root  109616 Sep 21  2022 touch
+  -rwxr-xr-x 1 root root   35664 Sep 21  2022 true
+  -rwxr-xr-x 1 root root   14568 Mar 23  2023 ulockmgr_server
+  -rwsr-xr-x 1 root root   35128 Mar 24  2023 umount
+  -rwxr-xr-x 1 root root   43888 Sep 21  2022 uname
+  -rwxr-xr-x 2 root root    2346 Apr 10  2022 uncompress
+  -rwxr-xr-x 1 root root  151344 Sep 21  2022 vdir
+  -rwxr-xr-x 1 root root   72024 Mar 24  2023 wdctl
+  lrwxrwxrwx 1 root root       8 Dec 20  2022 ypdomainname -> hostname
+  -rwxr-xr-x 1 root root    1984 Apr 10  2022 zcat
+  -rwxr-xr-x 1 root root    1678 Apr 10  2022 zcmp
+  -rwxr-xr-x 1 root root    6460 Apr 10  2022 zdiff
+  -rwxr-xr-x 1 root root      29 Apr 10  2022 zegrep
+  -rwxr-xr-x 1 root root      29 Apr 10  2022 zfgrep
+  -rwxr-xr-x 1 root root    2081 Apr 10  2022 zforce
+  -rwxr-xr-x 1 root root    8103 Apr 10  2022 zgrep
+  -rwxr-xr-x 1 root root    2206 Apr 10  2022 zless
+  -rwxr-xr-x 1 root root    1842 Apr 10  2022 zmore
+  -rwxr-xr-x 1 root root    4577 Apr 10  2022 znew
+I: user script /srv/workspace/pbuilder/3683552/tmp/hooks/D02_print_environment finished
  -> Attempting to satisfy build-dependencies
  -> Creating pbuilder-satisfydepends-dummy package
 Package: pbuilder-satisfydepends-dummy
@@ -562,7 +594,7 @@
 Get: 336 http://deb.debian.org/debian bookworm/main amd64 maven all 3.8.7-1 [18.9 kB]
 Get: 337 http://deb.debian.org/debian bookworm/main amd64 maven-repo-helper all 1.11 [142 kB]
 Get: 338 http://deb.debian.org/debian bookworm/main amd64 maven-debian-helper all 2.6.2 [108 kB]
-Fetched 485 MB in 9s (53.9 MB/s)
+Fetched 485 MB in 17s (28.0 MB/s)
 debconf: delaying package configuration, since apt-utils is not installed
 Selecting previously unselected package libpython3.11-minimal:amd64.
 (Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 19596 files and directories currently installed.)
@@ -2111,8 +2143,19 @@
 Writing extended state information...
 Building tag database...
  -> Finished parsing the build-deps
+Reading package lists...
+Building dependency tree...
+Reading state information...
+usrmerge is already the newest version (35).
+0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
 I: Building the package
-I: Running cd /build/snpsift-5.1+dfsg2/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S  > ../snpsift_5.1+dfsg2-2_source.changes
+I: user script /srv/workspace/pbuilder/3683552/tmp/hooks/A99_set_merged_usr starting
+Re-configuring usrmerge...
+removed '/etc/unsupported-skip-usrmerge-conversion'
+The system has been successfully converted.
+I: user script /srv/workspace/pbuilder/3683552/tmp/hooks/A99_set_merged_usr finished
+hostname: Name or service not known
+I: Running cd /build/snpsift-5.1+dfsg2/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S  > ../snpsift_5.1+dfsg2-2_source.changes
 dpkg-buildpackage: info: source package snpsift
 dpkg-buildpackage: info: source version 5.1+dfsg2-2
 dpkg-buildpackage: info: source distribution unstable
@@ -3768,8 +3811,8 @@
 [INFO] ------------------------------------------------------------------------
 [INFO] BUILD SUCCESS
 [INFO] ------------------------------------------------------------------------
-[INFO] Total time:  44.318 s
-[INFO] Finished at: 2023-04-21T16:18:25-12:00
+[INFO] Total time:  59.187 s
+[INFO] Finished at: 2024-05-25T00:55:53+14:00
 [INFO] ------------------------------------------------------------------------
    debian/rules override_dh_auto_test
 make[1]: Entering directory '/build/snpsift-5.1+dfsg2'
@@ -3809,13 +3852,13 @@
 Annotate: ./test/filterChrPos_01.txt	./test/filterChrPos_01.vcf
 Annotate: ./test/filterChrPos_02.txt	./test/filterChrPos_02.vcf
 Annotate: ./test/filterChrPos_03.txt	./test/filterChrPos_03.vcf
-[INFO] Tests run: 3, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.322 s - in org.snpsift.testCases.unit.TestCasesFilterChrPos
+[INFO] Tests run: 3, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.513 s - in org.snpsift.testCases.unit.TestCasesFilterChrPos
 [INFO] Running org.snpsift.testCases.unit.TestCasesGt
 TestCasesGt.test_01(25):	Test
-[INFO] Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.634 s - in org.snpsift.testCases.unit.TestCasesGt
+[INFO] Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 1.05 s - in org.snpsift.testCases.unit.TestCasesGt
 [INFO] Running org.snpsift.testCases.unit.TestCasesGeneSets
 TestCasesGeneSets.test_01(25):	Test
-[INFO] Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.089 s - in org.snpsift.testCases.unit.TestCasesGeneSets
+[INFO] Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.255 s - in org.snpsift.testCases.unit.TestCasesGeneSets
 [INFO] Running org.snpsift.testCases.unit.TestCasesAnnotateTabix
 TestCasesAnnotate.test_31_annotate_minimal_representation_db(642):	Test
 TestCasesAnnotate.test_29_repeated_IDs(618):	Test
@@ -3859,10 +3902,10 @@
 TestCasesAnnotate.test_34_dbStartsOnDifferentChromo(676):	Test
 TestCasesAnnotate.test_23_allele_specific_annotation_missing_R(491):	Test
 TestCasesAnnotate.test_27_repeat_db_entry(580):	Test
-[INFO] Tests run: 42, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 47.529 s - in org.snpsift.testCases.unit.TestCasesAnnotateTabix
+[INFO] Tests run: 42, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 71.893 s - in org.snpsift.testCases.unit.TestCasesAnnotateTabix
 [INFO] Running org.snpsift.testCases.unit.TestCasesVcfCheck
 TestCasesVcfCheck.test_01(18):	Test
-[INFO] Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.009 s - in org.snpsift.testCases.unit.TestCasesVcfCheck
+[INFO] Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.02 s - in org.snpsift.testCases.unit.TestCasesVcfCheck
 [INFO] Running org.snpsift.testCases.unit.TestCasesAnnotateUseIndex
 TestCasesAnnotate.test_31_annotate_minimal_representation_db(642):	Test
 TestCasesAnnotate.test_29_repeated_IDs(618):	Test
@@ -3906,16 +3949,16 @@
 TestCasesAnnotate.test_34_dbStartsOnDifferentChromo(676):	Test
 TestCasesAnnotate.test_23_allele_specific_annotation_missing_R(491):	Test
 TestCasesAnnotate.test_27_repeat_db_entry(580):	Test
-[INFO] Tests run: 42, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 59.912 s - in org.snpsift.testCases.unit.TestCasesAnnotateUseIndex
+[INFO] Tests run: 42, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 38.295 s - in org.snpsift.testCases.unit.TestCasesAnnotateUseIndex
 [INFO] Running org.snpsift.testCases.unit.TestCasesLd
-[INFO] Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.001 s - in org.snpsift.testCases.unit.TestCasesLd
+[INFO] Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0 s - in org.snpsift.testCases.unit.TestCasesLd
 [INFO] Running org.snpsift.testCases.unit.TestCasesSplit
 TestCasesSplit.test_01(28):	Test
 TestCasesSplit.test_02(58):	Test
 TestCasesSplit.test_03(84):	Test
-[INFO] Tests run: 3, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.003 s - in org.snpsift.testCases.unit.TestCasesSplit
+[INFO] Tests run: 3, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.001 s - in org.snpsift.testCases.unit.TestCasesSplit
 [INFO] Running org.snpsift.testCases.unit.TestCasesHwe
-[INFO] Tests run: 6, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.048 s - in org.snpsift.testCases.unit.TestCasesHwe
+[INFO] Tests run: 6, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.032 s - in org.snpsift.testCases.unit.TestCasesHwe
 [INFO] Running org.snpsift.testCases.unit.TestCasesAnnotateCreateIndex
 TestCasesAnnotate.test_31_annotate_minimal_representation_db(642):	Test
 TestCasesAnnotate.test_29_repeated_IDs(618):	Test
@@ -3959,7 +4002,7 @@
 TestCasesAnnotate.test_34_dbStartsOnDifferentChromo(676):	Test
 TestCasesAnnotate.test_23_allele_specific_annotation_missing_R(491):	Test
 TestCasesAnnotate.test_27_repeat_db_entry(580):	Test
-[INFO] Tests run: 42, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 50.871 s - in org.snpsift.testCases.unit.TestCasesAnnotateCreateIndex
+[INFO] Tests run: 42, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 43.257 s - in org.snpsift.testCases.unit.TestCasesAnnotateCreateIndex
 [INFO] Running org.snpsift.testCases.unit.TestCasesGwasCatalog
 TestCasesGwasCatalog.test_01(34):	Test
 WARNING_DUPLICATE_PRIMARY_KEY: GwasCatalog entry chr:pos '19:16185558' already exists
@@ -3990,7 +4033,7 @@
 WARNING_DUPLICATE_PRIMARY_KEY: GwasCatalog entry chr:pos ':-1' already exists
 WARNING_DUPLICATE_PRIMARY_KEY: Too many 'WARNING_DUPLICATE_PRIMARY_KEY' warnings, no further warnings will be shown.
 TestCasesGwasCatalog.test_02(50):	Test
-[INFO] Tests run: 2, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 2.091 s - in org.snpsift.testCases.unit.TestCasesGwasCatalog
+[INFO] Tests run: 2, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 1.859 s - in org.snpsift.testCases.unit.TestCasesGwasCatalog
 [INFO] Running org.snpsift.testCases.unit.TestCasesCaseControl
 TestCasesCaseControl.test_01(53):	Test
 TestCasesCaseControl.test_02(65):	Test
@@ -4009,14 +4052,14 @@
 TestCasesCaseControl.test_02_Str(71):	Test
 TestCasesCaseControl.test_03_Str(89):	Test
 TestCasesCaseControl.test_04_Str(113):	Test
-[INFO] Tests run: 17, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 1.172 s - in org.snpsift.testCases.unit.TestCasesCaseControl
+[INFO] Tests run: 17, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.635 s - in org.snpsift.testCases.unit.TestCasesCaseControl
 [INFO] Running org.snpsift.testCases.unit.TestCasesVarType
 TestCasesVarType.test_05_multiple(82):	Test
 TestCasesVarType.test_01_SNP(58):	Test
 TestCasesVarType.test_02_MNP(64):	Test
 TestCasesVarType.test_03_INS(70):	Test
 TestCasesVarType.test_04_DEL(76):	Test
-[INFO] Tests run: 5, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.034 s - in org.snpsift.testCases.unit.TestCasesVarType
+[INFO] Tests run: 5, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.032 s - in org.snpsift.testCases.unit.TestCasesVarType
 [INFO] Running org.snpsift.testCases.unit.TestCasesConcordance
 TestCasesConcordance.test_01(68):	Test
 TestCasesConcordance.test_02(74):	Test
@@ -4030,7 +4073,7 @@
 TestCasesConcordance.test_10(153):	Test
 TestCasesConcordance.test_11(164):	Test
 TestCasesConcordance.test_12(181):	Test
-[INFO] Tests run: 12, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.134 s - in org.snpsift.testCases.unit.TestCasesConcordance
+[INFO] Tests run: 12, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.125 s - in org.snpsift.testCases.unit.TestCasesConcordance
 [INFO] Running org.snpsift.testCases.unit.TestCasesAnnotateMem
 TestCasesAnnotate.test_31_annotate_minimal_representation_db(642):	Test
 TestCasesAnnotate.test_29_repeated_IDs(618):	Test
@@ -4074,16 +4117,16 @@
 TestCasesAnnotate.test_34_dbStartsOnDifferentChromo(676):	Test
 TestCasesAnnotate.test_23_allele_specific_annotation_missing_R(491):	Test
 TestCasesAnnotate.test_27_repeat_db_entry(580):	Test
-[INFO] Tests run: 42, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 50.057 s - in org.snpsift.testCases.unit.TestCasesAnnotateMem
+[INFO] Tests run: 42, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 41.324 s - in org.snpsift.testCases.unit.TestCasesAnnotateMem
 [INFO] Running org.snpsift.testCases.unit.TestCasesFilterGt
 TestCasesFilterGt.test_01(28):	Test
 ANTLR Tool version 4.9.3 used for code generation does not match the current runtime version 4.7.2ANTLR Tool version 4.9.3 used for code generation does not match the current runtime version 4.7.2TestCasesFilterGt.test_02(62):	Test
-[INFO] Tests run: 2, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.225 s - in org.snpsift.testCases.unit.TestCasesFilterGt
+[INFO] Tests run: 2, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.113 s - in org.snpsift.testCases.unit.TestCasesFilterGt
 [INFO] Running org.snpsift.testCases.unit.TestCasesSort
 TestCasesSort.test_01(30):	Test
-[INFO] Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.008 s - in org.snpsift.testCases.unit.TestCasesSort
+[INFO] Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.001 s - in org.snpsift.testCases.unit.TestCasesSort
 [INFO] Running org.snpsift.testCases.unit.TestCasesFilterALL
-[INFO] Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.249 s - in org.snpsift.testCases.unit.TestCasesFilterALL
+[INFO] Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.133 s - in org.snpsift.testCases.unit.TestCasesFilterALL
 [INFO] Running org.snpsift.testCases.unit.TestCasesExtractFields
 TestCasesExtractFields.test_31_ann(291):	Test
 TestCasesExtractFields.test_00(71):	Test
@@ -4120,7 +4163,7 @@
 TestCasesExtractFields.test_33(312):	Test
 TestCasesExtractFields.test_34(323):	Test
 TestCasesExtractFields.test_35(340):	Test
-[INFO] Tests run: 35, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.142 s - in org.snpsift.testCases.unit.TestCasesExtractFields
+[INFO] Tests run: 35, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.154 s - in org.snpsift.testCases.unit.TestCasesExtractFields
 [INFO] Running org.snpsift.testCases.unit.TestCasesDbNsfp
 TestCasesDbNsfp.test_01(113):	Test
 TestCasesDbNsfp.test_02(138):	Test
@@ -4128,7 +4171,7 @@
 TestCasesDbNsfp.test_04(179):	Test
 TestCasesDbNsfp.test_05(200):	Test
 TestCasesDbNsfp.test_06(223):	Test
-[INFO] Tests run: 11, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 12.117 s - in org.snpsift.testCases.unit.TestCasesDbNsfp
+[INFO] Tests run: 11, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 11.551 s - in org.snpsift.testCases.unit.TestCasesDbNsfp
 [INFO] Running org.snpsift.testCases.unit.TestCasesDbNsfpDeleteCache
 TestCasesDbNsfp.test_01(113):	Test
 TestCasesDbNsfp.test_02(138):	Test
@@ -4136,7 +4179,7 @@
 TestCasesDbNsfp.test_04(179):	Test
 TestCasesDbNsfp.test_05(200):	Test
 TestCasesDbNsfp.test_06(223):	Test
-[INFO] Tests run: 11, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 31.529 s - in org.snpsift.testCases.unit.TestCasesDbNsfpDeleteCache
+[INFO] Tests run: 11, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 35.244 s - in org.snpsift.testCases.unit.TestCasesDbNsfpDeleteCache
 [INFO] Running org.snpsift.testCases.unit.TestCasesPrivate
 TestCasesPrivate.test_01(48):	Test
 TestCasesPrivate.test_02(59):	Test
@@ -4146,7 +4189,7 @@
 TestCasesPrivate.test_06(95):	Test
 TestCasesPrivate.test_07(101):	Test
 TestCasesPrivate.test_08(107):	Test
-[INFO] Tests run: 8, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.008 s - in org.snpsift.testCases.unit.TestCasesPrivate
+[INFO] Tests run: 8, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.015 s - in org.snpsift.testCases.unit.TestCasesPrivate
 [INFO] Running org.snpsift.testCases.unit.TestCasesAnnotate
 TestCasesAnnotate.test_31_annotate_minimal_representation_db(642):	Test
 TestCasesAnnotate.test_29_repeated_IDs(618):	Test
@@ -4190,15 +4233,15 @@
 TestCasesAnnotate.test_34_dbStartsOnDifferentChromo(676):	Test
 TestCasesAnnotate.test_23_allele_specific_annotation_missing_R(491):	Test
 TestCasesAnnotate.test_27_repeat_db_entry(580):	Test
-[INFO] Tests run: 42, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 53.909 s - in org.snpsift.testCases.unit.TestCasesAnnotate
+[INFO] Tests run: 42, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 107.038 s - in org.snpsift.testCases.unit.TestCasesAnnotate
 [INFO] Running org.snpsift.testCases.unit.TestCasesIndex
 TestCasesIndex.test_01(32):	Test
 TestCasesIndex.test_02(84):	Test
-[INFO] Tests run: 2, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 4.084 s - in org.snpsift.testCases.unit.TestCasesIndex
+[INFO] Tests run: 2, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 10.365 s - in org.snpsift.testCases.unit.TestCasesIndex
 [INFO] Running org.snpsift.testCases.unit.TestCasesIntervals
 TestCasesIntervals.test_01(25):	Test
 TestCasesIntervals.test_02(50):	Test
-[INFO] Tests run: 2, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.01 s - in org.snpsift.testCases.unit.TestCasesIntervals
+[INFO] Tests run: 2, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.013 s - in org.snpsift.testCases.unit.TestCasesIntervals
 [INFO] Running org.snpsift.testCases.unit.TestCasesFilter
 TestCasesFilter.test_57_short_circuit_AND_OR_operators(1724):	Test
 TestCasesFilter.test_32_ann(988):	Test
@@ -4268,7 +4311,7 @@
 TestCasesFilter.test_27_ann2(812):	Test
 TestCasesFilter.test_26_ann(721):	Test
 TestCasesFilter.test_27_ann(778):	Test
-[INFO] Tests run: 68, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 3.27 s - in org.snpsift.testCases.unit.TestCasesFilter
+[INFO] Tests run: 68, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 7.144 s - in org.snpsift.testCases.unit.TestCasesFilter
 [INFO] 
 [INFO] Results:
 [INFO] 
@@ -4277,8 +4320,8 @@
 [INFO] ------------------------------------------------------------------------
 [INFO] BUILD SUCCESS
 [INFO] ------------------------------------------------------------------------
-[INFO] Total time:  05:36 min
-[INFO] Finished at: 2023-04-21T16:24:06-12:00
+[INFO] Total time:  06:30 min
+[INFO] Finished at: 2024-05-25T01:02:31+14:00
 [INFO] ------------------------------------------------------------------------
 make[1]: Leaving directory '/build/snpsift-5.1+dfsg2'
    create-stamp debian/debhelper-build-stamp
@@ -4302,8 +4345,8 @@
 [INFO] ------------------------------------------------------------------------
 [INFO] BUILD SUCCESS
 [INFO] ------------------------------------------------------------------------
-[INFO] Total time:  1.522 s
-[INFO] Finished at: 2023-04-21T16:24:11-12:00
+[INFO] Total time:  1.117 s
+[INFO] Finished at: 2024-05-25T01:02:37+14:00
 [INFO] ------------------------------------------------------------------------
 	mh_resolve_dependencies --non-interactive --offline --build -plibsnpsift-java --javadoc --base-directory=/build/snpsift-5.1\+dfsg2 --non-explore
 Failed to parse /usr/share/maven-repo/org/biojava/biojava-structure/6.x/biojava-structure-6.x.pom
@@ -4420,12 +4463,14 @@
 dpkg-buildpackage: info: binary-only upload (no source included)
 dpkg-genchanges: info: not including original source code in upload
 I: copying local configuration
+I: user script /srv/workspace/pbuilder/3683552/tmp/hooks/B01_cleanup starting
+I: user script /srv/workspace/pbuilder/3683552/tmp/hooks/B01_cleanup finished
 I: unmounting dev/ptmx filesystem
 I: unmounting dev/pts filesystem
 I: unmounting dev/shm filesystem
 I: unmounting proc filesystem
 I: unmounting sys filesystem
 I: cleaning the build env 
-I: removing directory /srv/workspace/pbuilder/2615716 and its subdirectories
-I: Current time: Fri Apr 21 16:24:55 -12 2023
-I: pbuilder-time-stamp: 1682137495
+I: removing directory /srv/workspace/pbuilder/3683552 and its subdirectories
+I: Current time: Sat May 25 01:03:17 +14 2024
+I: pbuilder-time-stamp: 1716548597