Diff of the two buildlogs: -- --- b1/build.log 2023-04-22 06:35:08.705150832 +0000 +++ b2/build.log 2023-04-22 06:36:09.742444680 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Fri May 24 00:57:09 -12 2024 -I: pbuilder-time-stamp: 1716555429 +I: Current time: Sat Apr 22 20:35:10 +14 2023 +I: pbuilder-time-stamp: 1682145310 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bookworm-reproducible-base.tgz] I: copying local configuration @@ -16,7 +16,7 @@ I: copying [./nrn-mod2c_0.9+git220919.orig.tar.gz] I: copying [./nrn-mod2c_0.9+git220919-2.debian.tar.xz] I: Extracting source -gpgv: Signature made Thu Feb 2 14:55:32 2023 -12 +gpgv: Signature made Fri Feb 3 16:55:32 2023 +14 gpgv: using RSA key D33A3F0CA16B0ACC51A60738494C8A5FBF4DECEB gpgv: issuer "mak@debian.org" gpgv: Can't check signature: No public key @@ -26,135 +26,167 @@ dpkg-source: info: unpacking nrn-mod2c_0.9+git220919-2.debian.tar.xz I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/1819018/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/3949300/tmp/hooks/D01_modify_environment starting +debug: Running on ionos1-amd64. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Apr 22 20:35 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/3949300/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/3949300/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='amd64' - DEBIAN_FRONTEND='noninteractive' - DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=16' - DISTRIBUTION='bookworm' - HOME='/root' - HOST_ARCH='amd64' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="2" [2]="15" [3]="1" [4]="release" [5]="x86_64-pc-linux-gnu") + BASH_VERSION='5.2.15(1)-release' + BUILDDIR=/build + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=amd64 + DEBIAN_FRONTEND=noninteractive + DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=15' + DIRSTACK=() + DISTRIBUTION=bookworm + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=x86_64 + HOST_ARCH=amd64 IFS=' ' - INVOCATION_ID='2a5127bd647c4166b952e166637bbc69' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='1819018' - PS1='# ' - PS2='> ' + INVOCATION_ID=945315677899435498eeaef2880363fc + LANG=C + LANGUAGE=et_EE:et + LC_ALL=C + MACHTYPE=x86_64-pc-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=3949300 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.Gqs61dO2/pbuilderrc_0TaQ --distribution bookworm --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bookworm-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.Gqs61dO2/b1 --logfile b1/build.log nrn-mod2c_0.9+git220919-2.dsc' - SUDO_GID='110' - SUDO_UID='105' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://85.184.249.68:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.Gqs61dO2/pbuilderrc_qwZz --distribution bookworm --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bookworm-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.Gqs61dO2/b2 --logfile b2/build.log --extrapackages usrmerge nrn-mod2c_0.9+git220919-2.dsc' + SUDO_GID=110 + SUDO_UID=105 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://78.137.99.97:3128 I: uname -a - Linux ionos5-amd64 6.1.0-0.deb11.5-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.12-1~bpo11+1 (2023-03-05) x86_64 GNU/Linux + Linux i-capture-the-hostname 5.10.0-21-amd64 #1 SMP Debian 5.10.162-1 (2023-01-21) x86_64 GNU/Linux I: ls -l /bin total 5632 - -rwxr-xr-x 1 root root 1265648 Feb 12 2023 bash - -rwxr-xr-x 3 root root 39224 Sep 18 2022 bunzip2 - -rwxr-xr-x 3 root root 39224 Sep 18 2022 bzcat - lrwxrwxrwx 1 root root 6 Sep 18 2022 bzcmp -> bzdiff - -rwxr-xr-x 1 root root 2225 Sep 18 2022 bzdiff - lrwxrwxrwx 1 root root 6 Sep 18 2022 bzegrep -> bzgrep - -rwxr-xr-x 1 root root 4893 Nov 27 2021 bzexe - lrwxrwxrwx 1 root root 6 Sep 18 2022 bzfgrep -> bzgrep - -rwxr-xr-x 1 root root 3775 Sep 18 2022 bzgrep - -rwxr-xr-x 3 root root 39224 Sep 18 2022 bzip2 - -rwxr-xr-x 1 root root 14568 Sep 18 2022 bzip2recover - lrwxrwxrwx 1 root root 6 Sep 18 2022 bzless -> bzmore - -rwxr-xr-x 1 root root 1297 Sep 18 2022 bzmore - -rwxr-xr-x 1 root root 44016 Sep 20 2022 cat - -rwxr-xr-x 1 root root 68656 Sep 20 2022 chgrp - -rwxr-xr-x 1 root root 64496 Sep 20 2022 chmod - -rwxr-xr-x 1 root root 72752 Sep 20 2022 chown - -rwxr-xr-x 1 root root 151152 Sep 20 2022 cp - -rwxr-xr-x 1 root root 125640 Jan 5 2023 dash - -rwxr-xr-x 1 root root 121904 Sep 20 2022 date - -rwxr-xr-x 1 root root 89240 Sep 20 2022 dd - -rwxr-xr-x 1 root root 102200 Sep 20 2022 df - -rwxr-xr-x 1 root root 151344 Sep 20 2022 dir - -rwxr-xr-x 1 root root 88656 Mar 22 2023 dmesg - lrwxrwxrwx 1 root root 8 Dec 19 2022 dnsdomainname -> hostname - lrwxrwxrwx 1 root root 8 Dec 19 2022 domainname -> hostname - -rwxr-xr-x 1 root root 43856 Sep 20 2022 echo - -rwxr-xr-x 1 root root 41 Jan 24 2023 egrep - -rwxr-xr-x 1 root root 35664 Sep 20 2022 false - -rwxr-xr-x 1 root root 41 Jan 24 2023 fgrep - -rwxr-xr-x 1 root root 85600 Mar 22 2023 findmnt - -rwsr-xr-x 1 root root 35128 Mar 22 2023 fusermount - -rwxr-xr-x 1 root root 203152 Jan 24 2023 grep - -rwxr-xr-x 2 root root 2346 Apr 9 2022 gunzip - -rwxr-xr-x 1 root root 6447 Apr 9 2022 gzexe - -rwxr-xr-x 1 root root 98136 Apr 9 2022 gzip - -rwxr-xr-x 1 root root 22680 Dec 19 2022 hostname - -rwxr-xr-x 1 root root 72824 Sep 20 2022 ln - -rwxr-xr-x 1 root root 53024 Mar 23 2023 login - -rwxr-xr-x 1 root root 151344 Sep 20 2022 ls - -rwxr-xr-x 1 root root 207168 Mar 22 2023 lsblk - -rwxr-xr-x 1 root root 97552 Sep 20 2022 mkdir - -rwxr-xr-x 1 root root 72912 Sep 20 2022 mknod - -rwxr-xr-x 1 root root 43952 Sep 20 2022 mktemp - -rwxr-xr-x 1 root root 59712 Mar 22 2023 more - -rwsr-xr-x 1 root root 59704 Mar 22 2023 mount - -rwxr-xr-x 1 root root 18744 Mar 22 2023 mountpoint - -rwxr-xr-x 1 root root 142968 Sep 20 2022 mv - lrwxrwxrwx 1 root root 8 Dec 19 2022 nisdomainname -> hostname - lrwxrwxrwx 1 root root 14 Apr 2 2023 pidof -> /sbin/killall5 - -rwxr-xr-x 1 root root 43952 Sep 20 2022 pwd - lrwxrwxrwx 1 root root 4 Feb 12 2023 rbash -> bash - -rwxr-xr-x 1 root root 52112 Sep 20 2022 readlink - -rwxr-xr-x 1 root root 72752 Sep 20 2022 rm - -rwxr-xr-x 1 root root 56240 Sep 20 2022 rmdir - -rwxr-xr-x 1 root root 27560 Nov 2 2022 run-parts - -rwxr-xr-x 1 root root 126424 Jan 5 2023 sed - lrwxrwxrwx 1 root root 4 Jan 5 2023 sh -> dash - -rwxr-xr-x 1 root root 43888 Sep 20 2022 sleep - -rwxr-xr-x 1 root root 85008 Sep 20 2022 stty - -rwsr-xr-x 1 root root 72000 Mar 22 2023 su - -rwxr-xr-x 1 root root 39824 Sep 20 2022 sync - -rwxr-xr-x 1 root root 531984 Apr 6 2023 tar - -rwxr-xr-x 1 root root 14520 Nov 2 2022 tempfile - -rwxr-xr-x 1 root root 109616 Sep 20 2022 touch - -rwxr-xr-x 1 root root 35664 Sep 20 2022 true - -rwxr-xr-x 1 root root 14568 Mar 22 2023 ulockmgr_server - -rwsr-xr-x 1 root root 35128 Mar 22 2023 umount - -rwxr-xr-x 1 root root 43888 Sep 20 2022 uname - -rwxr-xr-x 2 root root 2346 Apr 9 2022 uncompress - -rwxr-xr-x 1 root root 151344 Sep 20 2022 vdir - -rwxr-xr-x 1 root root 72024 Mar 22 2023 wdctl - lrwxrwxrwx 1 root root 8 Dec 19 2022 ypdomainname -> hostname - -rwxr-xr-x 1 root root 1984 Apr 9 2022 zcat - -rwxr-xr-x 1 root root 1678 Apr 9 2022 zcmp - -rwxr-xr-x 1 root root 6460 Apr 9 2022 zdiff - -rwxr-xr-x 1 root root 29 Apr 9 2022 zegrep - -rwxr-xr-x 1 root root 29 Apr 9 2022 zfgrep - -rwxr-xr-x 1 root root 2081 Apr 9 2022 zforce - -rwxr-xr-x 1 root root 8103 Apr 9 2022 zgrep - -rwxr-xr-x 1 root root 2206 Apr 9 2022 zless - -rwxr-xr-x 1 root root 1842 Apr 9 2022 zmore - -rwxr-xr-x 1 root root 4577 Apr 9 2022 znew -I: user script /srv/workspace/pbuilder/1819018/tmp/hooks/D02_print_environment finished + -rwxr-xr-x 1 root root 1265648 Feb 13 10:05 bash + -rwxr-xr-x 3 root root 39224 Sep 19 2022 bunzip2 + -rwxr-xr-x 3 root root 39224 Sep 19 2022 bzcat + lrwxrwxrwx 1 root root 6 Sep 19 2022 bzcmp -> bzdiff + -rwxr-xr-x 1 root root 2225 Sep 19 2022 bzdiff + lrwxrwxrwx 1 root root 6 Sep 19 2022 bzegrep -> bzgrep + -rwxr-xr-x 1 root root 4893 Nov 28 2021 bzexe + lrwxrwxrwx 1 root root 6 Sep 19 2022 bzfgrep -> bzgrep + -rwxr-xr-x 1 root root 3775 Sep 19 2022 bzgrep + -rwxr-xr-x 3 root root 39224 Sep 19 2022 bzip2 + -rwxr-xr-x 1 root root 14568 Sep 19 2022 bzip2recover + lrwxrwxrwx 1 root root 6 Sep 19 2022 bzless -> bzmore + -rwxr-xr-x 1 root root 1297 Sep 19 2022 bzmore + -rwxr-xr-x 1 root root 44016 Sep 21 2022 cat + -rwxr-xr-x 1 root root 68656 Sep 21 2022 chgrp + -rwxr-xr-x 1 root root 64496 Sep 21 2022 chmod + -rwxr-xr-x 1 root root 72752 Sep 21 2022 chown + -rwxr-xr-x 1 root root 151152 Sep 21 2022 cp + -rwxr-xr-x 1 root root 125640 Jan 6 03:20 dash + -rwxr-xr-x 1 root root 121904 Sep 21 2022 date + -rwxr-xr-x 1 root root 89240 Sep 21 2022 dd + -rwxr-xr-x 1 root root 102200 Sep 21 2022 df + -rwxr-xr-x 1 root root 151344 Sep 21 2022 dir + -rwxr-xr-x 1 root root 88656 Mar 24 00:02 dmesg + lrwxrwxrwx 1 root root 8 Dec 20 03:33 dnsdomainname -> hostname + lrwxrwxrwx 1 root root 8 Dec 20 03:33 domainname -> hostname + -rwxr-xr-x 1 root root 43856 Sep 21 2022 echo + -rwxr-xr-x 1 root root 41 Jan 25 04:43 egrep + -rwxr-xr-x 1 root root 35664 Sep 21 2022 false + -rwxr-xr-x 1 root root 41 Jan 25 04:43 fgrep + -rwxr-xr-x 1 root root 85600 Mar 24 00:02 findmnt + -rwsr-xr-x 1 root root 35128 Mar 23 22:35 fusermount + -rwxr-xr-x 1 root root 203152 Jan 25 04:43 grep + -rwxr-xr-x 2 root root 2346 Apr 10 2022 gunzip + -rwxr-xr-x 1 root root 6447 Apr 10 2022 gzexe + -rwxr-xr-x 1 root root 98136 Apr 10 2022 gzip + -rwxr-xr-x 1 root root 22680 Dec 20 03:33 hostname + -rwxr-xr-x 1 root root 72824 Sep 21 2022 ln + -rwxr-xr-x 1 root root 53024 Mar 24 02:40 login + -rwxr-xr-x 1 root root 151344 Sep 21 2022 ls + -rwxr-xr-x 1 root root 207168 Mar 24 00:02 lsblk + -rwxr-xr-x 1 root root 97552 Sep 21 2022 mkdir + -rwxr-xr-x 1 root root 72912 Sep 21 2022 mknod + -rwxr-xr-x 1 root root 43952 Sep 21 2022 mktemp + -rwxr-xr-x 1 root root 59712 Mar 24 00:02 more + -rwsr-xr-x 1 root root 59704 Mar 24 00:02 mount + -rwxr-xr-x 1 root root 18744 Mar 24 00:02 mountpoint + -rwxr-xr-x 1 root root 142968 Sep 21 2022 mv + lrwxrwxrwx 1 root root 8 Dec 20 03:33 nisdomainname -> hostname + lrwxrwxrwx 1 root root 14 Apr 3 20:25 pidof -> /sbin/killall5 + -rwxr-xr-x 1 root root 43952 Sep 21 2022 pwd + lrwxrwxrwx 1 root root 4 Feb 13 10:05 rbash -> bash + -rwxr-xr-x 1 root root 52112 Sep 21 2022 readlink + -rwxr-xr-x 1 root root 72752 Sep 21 2022 rm + -rwxr-xr-x 1 root root 56240 Sep 21 2022 rmdir + -rwxr-xr-x 1 root root 27560 Nov 3 06:31 run-parts + -rwxr-xr-x 1 root root 126424 Jan 6 09:55 sed + lrwxrwxrwx 1 root root 9 Apr 22 20:35 sh -> /bin/bash + -rwxr-xr-x 1 root root 43888 Sep 21 2022 sleep + -rwxr-xr-x 1 root root 85008 Sep 21 2022 stty + -rwsr-xr-x 1 root root 72000 Mar 24 00:02 su + -rwxr-xr-x 1 root root 39824 Sep 21 2022 sync + -rwxr-xr-x 1 root root 531984 Apr 7 04:25 tar + -rwxr-xr-x 1 root root 14520 Nov 3 06:31 tempfile + -rwxr-xr-x 1 root root 109616 Sep 21 2022 touch + -rwxr-xr-x 1 root root 35664 Sep 21 2022 true + -rwxr-xr-x 1 root root 14568 Mar 23 22:35 ulockmgr_server + -rwsr-xr-x 1 root root 35128 Mar 24 00:02 umount + -rwxr-xr-x 1 root root 43888 Sep 21 2022 uname + -rwxr-xr-x 2 root root 2346 Apr 10 2022 uncompress + -rwxr-xr-x 1 root root 151344 Sep 21 2022 vdir + -rwxr-xr-x 1 root root 72024 Mar 24 00:02 wdctl + lrwxrwxrwx 1 root root 8 Dec 20 03:33 ypdomainname -> hostname + -rwxr-xr-x 1 root root 1984 Apr 10 2022 zcat + -rwxr-xr-x 1 root root 1678 Apr 10 2022 zcmp + -rwxr-xr-x 1 root root 6460 Apr 10 2022 zdiff + -rwxr-xr-x 1 root root 29 Apr 10 2022 zegrep + -rwxr-xr-x 1 root root 29 Apr 10 2022 zfgrep + -rwxr-xr-x 1 root root 2081 Apr 10 2022 zforce + -rwxr-xr-x 1 root root 8103 Apr 10 2022 zgrep + -rwxr-xr-x 1 root root 2206 Apr 10 2022 zless + -rwxr-xr-x 1 root root 1842 Apr 10 2022 zmore + -rwxr-xr-x 1 root root 4577 Apr 10 2022 znew +I: user script /srv/workspace/pbuilder/3949300/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -246,7 +278,7 @@ Get: 48 http://deb.debian.org/debian bookworm/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 49 http://deb.debian.org/debian bookworm/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 50 http://deb.debian.org/debian bookworm/main amd64 debhelper all 13.11.4 [942 kB] -Fetched 33.9 MB in 1s (63.2 MB/s) +Fetched 33.9 MB in 1s (54.1 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package m4. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19596 files and directories currently installed.) @@ -461,8 +493,19 @@ Writing extended state information... Building tag database... -> Finished parsing the build-deps +Reading package lists... +Building dependency tree... +Reading state information... +usrmerge is already the newest version (35). +0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: Building the package -I: Running cd /build/nrn-mod2c-0.9+git220919/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../nrn-mod2c_0.9+git220919-2_source.changes +I: user script /srv/workspace/pbuilder/3949300/tmp/hooks/A99_set_merged_usr starting +Re-configuring usrmerge... +removed '/etc/unsupported-skip-usrmerge-conversion' +The system has been successfully converted. +I: user script /srv/workspace/pbuilder/3949300/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/nrn-mod2c-0.9+git220919/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../nrn-mod2c_0.9+git220919-2_source.changes dpkg-buildpackage: info: source package nrn-mod2c dpkg-buildpackage: info: source version 0.9+git220919-2 dpkg-buildpackage: info: source distribution unstable @@ -509,7 +552,7 @@ -- Build files have been written to: /build/nrn-mod2c-0.9+git220919/obj-x86_64-linux-gnu dh_auto_build - cd obj-x86_64-linux-gnu && make -j16 "INSTALL=install --strip-program=true" VERBOSE=1 + cd obj-x86_64-linux-gnu && make -j15 "INSTALL=install --strip-program=true" VERBOSE=1 make[1]: Entering directory '/build/nrn-mod2c-0.9+git220919/obj-x86_64-linux-gnu' /usr/bin/cmake -S/build/nrn-mod2c-0.9+git220919 -B/build/nrn-mod2c-0.9+git220919/obj-x86_64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/nrn-mod2c-0.9+git220919/obj-x86_64-linux-gnu/CMakeFiles /build/nrn-mod2c-0.9+git220919/obj-x86_64-linux-gnu//CMakeFiles/progress.marks @@ -517,12 +560,12 @@ make[2]: Entering directory '/build/nrn-mod2c-0.9+git220919/obj-x86_64-linux-gnu' make -f src/mod2c_core/CMakeFiles/mod2c_core.dir/build.make src/mod2c_core/CMakeFiles/mod2c_core.dir/depend make[3]: Entering directory '/build/nrn-mod2c-0.9+git220919/obj-x86_64-linux-gnu' -[ 4%] [BISON][parse1] Building parser with bison 3.8.2 -cd /build/nrn-mod2c-0.9+git220919/obj-x86_64-linux-gnu/src/mod2c_core && /usr/bin/bison --defines=parse1.h -o parse1.c ../../../src/mod2c_core/parse1.y -[ 8%] [BISON][diffeq] Building parser with bison 3.8.2 +[ 4%] [BISON][diffeq] Building parser with bison 3.8.2 +[ 8%] [BISON][parse1] Building parser with bison 3.8.2 cd /build/nrn-mod2c-0.9+git220919/obj-x86_64-linux-gnu/src/mod2c_core && /usr/bin/bison --defines=diffeq.h -o diffeq.c ../../../src/mod2c_core/diffeq.y ../../../src/mod2c_core/diffeq.y: warning: 5 shift/reduce conflicts [-Wconflicts-sr] ../../../src/mod2c_core/diffeq.y: note: rerun with option '-Wcounterexamples' to generate conflict counterexamples +cd /build/nrn-mod2c-0.9+git220919/obj-x86_64-linux-gnu/src/mod2c_core && /usr/bin/bison --defines=parse1.h -o parse1.c ../../../src/mod2c_core/parse1.y [ 12%] [FLEX][lex] Building scanner with flex 2.6.4 cd /build/nrn-mod2c-0.9+git220919/obj-x86_64-linux-gnu/src/mod2c_core && /usr/bin/flex -o lex.c ../../../src/mod2c_core/lex.l cd /build/nrn-mod2c-0.9+git220919/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/nrn-mod2c-0.9+git220919 /build/nrn-mod2c-0.9+git220919/src/mod2c_core /build/nrn-mod2c-0.9+git220919/obj-x86_64-linux-gnu /build/nrn-mod2c-0.9+git220919/obj-x86_64-linux-gnu/src/mod2c_core /build/nrn-mod2c-0.9+git220919/obj-x86_64-linux-gnu/src/mod2c_core/CMakeFiles/mod2c_core.dir/DependInfo.cmake --color= @@ -532,37 +575,41 @@ [ 16%] Building C object src/mod2c_core/CMakeFiles/mod2c_core.dir/io.c.o cd /build/nrn-mod2c-0.9+git220919/obj-x86_64-linux-gnu/src/mod2c_core && /usr/bin/cc -DBBCORE=1 -DCVODE=1 -DNMODL=1 -DNOCMODL=1 -DUSE_LEGACY_UNITS=0 -DVECTORIZE=1 -I/build/nrn-mod2c-0.9+git220919/src/mod2c_core -I/build/nrn-mod2c-0.9+git220919/obj-x86_64-linux-gnu/src/mod2c_core -g -O2 -ffile-prefix-map=/build/nrn-mod2c-0.9+git220919=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -g -fstack-protector-all -MD -MT src/mod2c_core/CMakeFiles/mod2c_core.dir/io.c.o -MF CMakeFiles/mod2c_core.dir/io.c.o.d -o CMakeFiles/mod2c_core.dir/io.c.o -c /build/nrn-mod2c-0.9+git220919/src/mod2c_core/io.c [ 20%] Building C object src/mod2c_core/CMakeFiles/mod2c_core.dir/consist.c.o -cd /build/nrn-mod2c-0.9+git220919/obj-x86_64-linux-gnu/src/mod2c_core && /usr/bin/cc -DBBCORE=1 -DCVODE=1 -DNMODL=1 -DNOCMODL=1 -DUSE_LEGACY_UNITS=0 -DVECTORIZE=1 -I/build/nrn-mod2c-0.9+git220919/src/mod2c_core -I/build/nrn-mod2c-0.9+git220919/obj-x86_64-linux-gnu/src/mod2c_core -g -O2 -ffile-prefix-map=/build/nrn-mod2c-0.9+git220919=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -g -fstack-protector-all -MD -MT src/mod2c_core/CMakeFiles/mod2c_core.dir/consist.c.o -MF CMakeFiles/mod2c_core.dir/consist.c.o.d -o CMakeFiles/mod2c_core.dir/consist.c.o -c /build/nrn-mod2c-0.9+git220919/src/mod2c_core/consist.c [ 24%] Building C object src/mod2c_core/CMakeFiles/mod2c_core.dir/list.c.o +cd /build/nrn-mod2c-0.9+git220919/obj-x86_64-linux-gnu/src/mod2c_core && /usr/bin/cc -DBBCORE=1 -DCVODE=1 -DNMODL=1 -DNOCMODL=1 -DUSE_LEGACY_UNITS=0 -DVECTORIZE=1 -I/build/nrn-mod2c-0.9+git220919/src/mod2c_core -I/build/nrn-mod2c-0.9+git220919/obj-x86_64-linux-gnu/src/mod2c_core -g -O2 -ffile-prefix-map=/build/nrn-mod2c-0.9+git220919=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -g -fstack-protector-all -MD -MT src/mod2c_core/CMakeFiles/mod2c_core.dir/consist.c.o -MF CMakeFiles/mod2c_core.dir/consist.c.o.d -o CMakeFiles/mod2c_core.dir/consist.c.o -c /build/nrn-mod2c-0.9+git220919/src/mod2c_core/consist.c [ 28%] Building C object src/mod2c_core/CMakeFiles/mod2c_core.dir/nocpout.c.o cd /build/nrn-mod2c-0.9+git220919/obj-x86_64-linux-gnu/src/mod2c_core && /usr/bin/cc -DBBCORE=1 -DCVODE=1 -DNMODL=1 -DNOCMODL=1 -DUSE_LEGACY_UNITS=0 -DVECTORIZE=1 -I/build/nrn-mod2c-0.9+git220919/src/mod2c_core -I/build/nrn-mod2c-0.9+git220919/obj-x86_64-linux-gnu/src/mod2c_core -g -O2 -ffile-prefix-map=/build/nrn-mod2c-0.9+git220919=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -g -fstack-protector-all -MD -MT src/mod2c_core/CMakeFiles/mod2c_core.dir/list.c.o -MF CMakeFiles/mod2c_core.dir/list.c.o.d -o CMakeFiles/mod2c_core.dir/list.c.o -c /build/nrn-mod2c-0.9+git220919/src/mod2c_core/list.c cd /build/nrn-mod2c-0.9+git220919/obj-x86_64-linux-gnu/src/mod2c_core && /usr/bin/cc -DBBCORE=1 -DCVODE=1 -DNMODL=1 -DNOCMODL=1 -DUSE_LEGACY_UNITS=0 -DVECTORIZE=1 -I/build/nrn-mod2c-0.9+git220919/src/mod2c_core -I/build/nrn-mod2c-0.9+git220919/obj-x86_64-linux-gnu/src/mod2c_core -g -O2 -ffile-prefix-map=/build/nrn-mod2c-0.9+git220919=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -g -fstack-protector-all -MD -MT src/mod2c_core/CMakeFiles/mod2c_core.dir/nocpout.c.o -MF CMakeFiles/mod2c_core.dir/nocpout.c.o.d -o CMakeFiles/mod2c_core.dir/nocpout.c.o -c /build/nrn-mod2c-0.9+git220919/src/mod2c_core/nocpout.c [ 32%] Building C object src/mod2c_core/CMakeFiles/mod2c_core.dir/partial.c.o -cd /build/nrn-mod2c-0.9+git220919/obj-x86_64-linux-gnu/src/mod2c_core && /usr/bin/cc -DBBCORE=1 -DCVODE=1 -DNMODL=1 -DNOCMODL=1 -DUSE_LEGACY_UNITS=0 -DVECTORIZE=1 -I/build/nrn-mod2c-0.9+git220919/src/mod2c_core -I/build/nrn-mod2c-0.9+git220919/obj-x86_64-linux-gnu/src/mod2c_core -g -O2 -ffile-prefix-map=/build/nrn-mod2c-0.9+git220919=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -g -fstack-protector-all -MD -MT src/mod2c_core/CMakeFiles/mod2c_core.dir/partial.c.o -MF CMakeFiles/mod2c_core.dir/partial.c.o.d -o CMakeFiles/mod2c_core.dir/partial.c.o -c /build/nrn-mod2c-0.9+git220919/src/mod2c_core/partial.c [ 36%] Building C object src/mod2c_core/CMakeFiles/mod2c_core.dir/solve.c.o -cd /build/nrn-mod2c-0.9+git220919/obj-x86_64-linux-gnu/src/mod2c_core && /usr/bin/cc -DBBCORE=1 -DCVODE=1 -DNMODL=1 -DNOCMODL=1 -DUSE_LEGACY_UNITS=0 -DVECTORIZE=1 -I/build/nrn-mod2c-0.9+git220919/src/mod2c_core -I/build/nrn-mod2c-0.9+git220919/obj-x86_64-linux-gnu/src/mod2c_core -g -O2 -ffile-prefix-map=/build/nrn-mod2c-0.9+git220919=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -g -fstack-protector-all -MD -MT src/mod2c_core/CMakeFiles/mod2c_core.dir/solve.c.o -MF CMakeFiles/mod2c_core.dir/solve.c.o.d -o CMakeFiles/mod2c_core.dir/solve.c.o -c /build/nrn-mod2c-0.9+git220919/src/mod2c_core/solve.c +cd /build/nrn-mod2c-0.9+git220919/obj-x86_64-linux-gnu/src/mod2c_core && /usr/bin/cc -DBBCORE=1 -DCVODE=1 -DNMODL=1 -DNOCMODL=1 -DUSE_LEGACY_UNITS=0 -DVECTORIZE=1 -I/build/nrn-mod2c-0.9+git220919/src/mod2c_core -I/build/nrn-mod2c-0.9+git220919/obj-x86_64-linux-gnu/src/mod2c_core -g -O2 -ffile-prefix-map=/build/nrn-mod2c-0.9+git220919=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -g -fstack-protector-all -MD -MT src/mod2c_core/CMakeFiles/mod2c_core.dir/partial.c.o -MF CMakeFiles/mod2c_core.dir/partial.c.o.d -o CMakeFiles/mod2c_core.dir/partial.c.o -c /build/nrn-mod2c-0.9+git220919/src/mod2c_core/partial.c [ 40%] Building C object src/mod2c_core/CMakeFiles/mod2c_core.dir/version.c.o -cd /build/nrn-mod2c-0.9+git220919/obj-x86_64-linux-gnu/src/mod2c_core && /usr/bin/cc -DBBCORE=1 -DCVODE=1 -DNMODL=1 -DNOCMODL=1 -DUSE_LEGACY_UNITS=0 -DVECTORIZE=1 -I/build/nrn-mod2c-0.9+git220919/src/mod2c_core -I/build/nrn-mod2c-0.9+git220919/obj-x86_64-linux-gnu/src/mod2c_core -g -O2 -ffile-prefix-map=/build/nrn-mod2c-0.9+git220919=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -g -fstack-protector-all -MD -MT src/mod2c_core/CMakeFiles/mod2c_core.dir/version.c.o -MF CMakeFiles/mod2c_core.dir/version.c.o.d -o CMakeFiles/mod2c_core.dir/version.c.o -c /build/nrn-mod2c-0.9+git220919/src/mod2c_core/version.c +cd /build/nrn-mod2c-0.9+git220919/obj-x86_64-linux-gnu/src/mod2c_core && /usr/bin/cc -DBBCORE=1 -DCVODE=1 -DNMODL=1 -DNOCMODL=1 -DUSE_LEGACY_UNITS=0 -DVECTORIZE=1 -I/build/nrn-mod2c-0.9+git220919/src/mod2c_core -I/build/nrn-mod2c-0.9+git220919/obj-x86_64-linux-gnu/src/mod2c_core -g -O2 -ffile-prefix-map=/build/nrn-mod2c-0.9+git220919=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -g -fstack-protector-all -MD -MT src/mod2c_core/CMakeFiles/mod2c_core.dir/solve.c.o -MF CMakeFiles/mod2c_core.dir/solve.c.o.d -o CMakeFiles/mod2c_core.dir/solve.c.o -c /build/nrn-mod2c-0.9+git220919/src/mod2c_core/solve.c [ 44%] Building C object src/mod2c_core/CMakeFiles/mod2c_core.dir/discrete.c.o -cd /build/nrn-mod2c-0.9+git220919/obj-x86_64-linux-gnu/src/mod2c_core && /usr/bin/cc -DBBCORE=1 -DCVODE=1 -DNMODL=1 -DNOCMODL=1 -DUSE_LEGACY_UNITS=0 -DVECTORIZE=1 -I/build/nrn-mod2c-0.9+git220919/src/mod2c_core -I/build/nrn-mod2c-0.9+git220919/obj-x86_64-linux-gnu/src/mod2c_core -g -O2 -ffile-prefix-map=/build/nrn-mod2c-0.9+git220919=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -g -fstack-protector-all -MD -MT src/mod2c_core/CMakeFiles/mod2c_core.dir/discrete.c.o -MF CMakeFiles/mod2c_core.dir/discrete.c.o.d -o CMakeFiles/mod2c_core.dir/discrete.c.o -c /build/nrn-mod2c-0.9+git220919/src/mod2c_core/discrete.c +cd /build/nrn-mod2c-0.9+git220919/obj-x86_64-linux-gnu/src/mod2c_core && /usr/bin/cc -DBBCORE=1 -DCVODE=1 -DNMODL=1 -DNOCMODL=1 -DUSE_LEGACY_UNITS=0 -DVECTORIZE=1 -I/build/nrn-mod2c-0.9+git220919/src/mod2c_core -I/build/nrn-mod2c-0.9+git220919/obj-x86_64-linux-gnu/src/mod2c_core -g -O2 -ffile-prefix-map=/build/nrn-mod2c-0.9+git220919=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -g -fstack-protector-all -MD -MT src/mod2c_core/CMakeFiles/mod2c_core.dir/version.c.o -MF CMakeFiles/mod2c_core.dir/version.c.o.d -o CMakeFiles/mod2c_core.dir/version.c.o -c /build/nrn-mod2c-0.9+git220919/src/mod2c_core/version.c [ 48%] Building C object src/mod2c_core/CMakeFiles/mod2c_core.dir/kinetic.c.o +cd /build/nrn-mod2c-0.9+git220919/obj-x86_64-linux-gnu/src/mod2c_core && /usr/bin/cc -DBBCORE=1 -DCVODE=1 -DNMODL=1 -DNOCMODL=1 -DUSE_LEGACY_UNITS=0 -DVECTORIZE=1 -I/build/nrn-mod2c-0.9+git220919/src/mod2c_core -I/build/nrn-mod2c-0.9+git220919/obj-x86_64-linux-gnu/src/mod2c_core -g -O2 -ffile-prefix-map=/build/nrn-mod2c-0.9+git220919=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -g -fstack-protector-all -MD -MT src/mod2c_core/CMakeFiles/mod2c_core.dir/discrete.c.o -MF CMakeFiles/mod2c_core.dir/discrete.c.o.d -o CMakeFiles/mod2c_core.dir/discrete.c.o -c /build/nrn-mod2c-0.9+git220919/src/mod2c_core/discrete.c cd /build/nrn-mod2c-0.9+git220919/obj-x86_64-linux-gnu/src/mod2c_core && /usr/bin/cc -DBBCORE=1 -DCVODE=1 -DNMODL=1 -DNOCMODL=1 -DUSE_LEGACY_UNITS=0 -DVECTORIZE=1 -I/build/nrn-mod2c-0.9+git220919/src/mod2c_core -I/build/nrn-mod2c-0.9+git220919/obj-x86_64-linux-gnu/src/mod2c_core -g -O2 -ffile-prefix-map=/build/nrn-mod2c-0.9+git220919=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -g -fstack-protector-all -MD -MT src/mod2c_core/CMakeFiles/mod2c_core.dir/kinetic.c.o -MF CMakeFiles/mod2c_core.dir/kinetic.c.o.d -o CMakeFiles/mod2c_core.dir/kinetic.c.o -c /build/nrn-mod2c-0.9+git220919/src/mod2c_core/kinetic.c [ 52%] Building C object src/mod2c_core/CMakeFiles/mod2c_core.dir/modl.c.o cd /build/nrn-mod2c-0.9+git220919/obj-x86_64-linux-gnu/src/mod2c_core && /usr/bin/cc -DBBCORE=1 -DCVODE=1 -DNMODL=1 -DNOCMODL=1 -DUSE_LEGACY_UNITS=0 -DVECTORIZE=1 -I/build/nrn-mod2c-0.9+git220919/src/mod2c_core -I/build/nrn-mod2c-0.9+git220919/obj-x86_64-linux-gnu/src/mod2c_core -g -O2 -ffile-prefix-map=/build/nrn-mod2c-0.9+git220919=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -g -fstack-protector-all -MD -MT src/mod2c_core/CMakeFiles/mod2c_core.dir/modl.c.o -MF CMakeFiles/mod2c_core.dir/modl.c.o.d -o CMakeFiles/mod2c_core.dir/modl.c.o -c /build/nrn-mod2c-0.9+git220919/src/mod2c_core/modl.c -[ 56%] Building C object src/mod2c_core/CMakeFiles/mod2c_core.dir/parsact.c.o -cd /build/nrn-mod2c-0.9+git220919/obj-x86_64-linux-gnu/src/mod2c_core && /usr/bin/cc -DBBCORE=1 -DCVODE=1 -DNMODL=1 -DNOCMODL=1 -DUSE_LEGACY_UNITS=0 -DVECTORIZE=1 -I/build/nrn-mod2c-0.9+git220919/src/mod2c_core -I/build/nrn-mod2c-0.9+git220919/obj-x86_64-linux-gnu/src/mod2c_core -g -O2 -ffile-prefix-map=/build/nrn-mod2c-0.9+git220919=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -g -fstack-protector-all -MD -MT src/mod2c_core/CMakeFiles/mod2c_core.dir/parsact.c.o -MF CMakeFiles/mod2c_core.dir/parsact.c.o.d -o CMakeFiles/mod2c_core.dir/parsact.c.o -c /build/nrn-mod2c-0.9+git220919/src/mod2c_core/parsact.c -[ 60%] Building C object src/mod2c_core/CMakeFiles/mod2c_core.dir/sens.c.o +[ 56%] Building C object src/mod2c_core/CMakeFiles/mod2c_core.dir/sens.c.o +[ 60%] Building C object src/mod2c_core/CMakeFiles/mod2c_core.dir/parsact.c.o cd /build/nrn-mod2c-0.9+git220919/obj-x86_64-linux-gnu/src/mod2c_core && /usr/bin/cc -DBBCORE=1 -DCVODE=1 -DNMODL=1 -DNOCMODL=1 -DUSE_LEGACY_UNITS=0 -DVECTORIZE=1 -I/build/nrn-mod2c-0.9+git220919/src/mod2c_core -I/build/nrn-mod2c-0.9+git220919/obj-x86_64-linux-gnu/src/mod2c_core -g -O2 -ffile-prefix-map=/build/nrn-mod2c-0.9+git220919=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -g -fstack-protector-all -MD -MT src/mod2c_core/CMakeFiles/mod2c_core.dir/sens.c.o -MF CMakeFiles/mod2c_core.dir/sens.c.o.d -o CMakeFiles/mod2c_core.dir/sens.c.o -c /build/nrn-mod2c-0.9+git220919/src/mod2c_core/sens.c [ 64%] Building C object src/mod2c_core/CMakeFiles/mod2c_core.dir/symbol.c.o -cd /build/nrn-mod2c-0.9+git220919/obj-x86_64-linux-gnu/src/mod2c_core && /usr/bin/cc -DBBCORE=1 -DCVODE=1 -DNMODL=1 -DNOCMODL=1 -DUSE_LEGACY_UNITS=0 -DVECTORIZE=1 -I/build/nrn-mod2c-0.9+git220919/src/mod2c_core -I/build/nrn-mod2c-0.9+git220919/obj-x86_64-linux-gnu/src/mod2c_core -g -O2 -ffile-prefix-map=/build/nrn-mod2c-0.9+git220919=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -g -fstack-protector-all -MD -MT src/mod2c_core/CMakeFiles/mod2c_core.dir/symbol.c.o -MF CMakeFiles/mod2c_core.dir/symbol.c.o.d -o CMakeFiles/mod2c_core.dir/symbol.c.o -c /build/nrn-mod2c-0.9+git220919/src/mod2c_core/symbol.c [ 68%] Building C object src/mod2c_core/CMakeFiles/mod2c_core.dir/deriv.c.o +cd /build/nrn-mod2c-0.9+git220919/obj-x86_64-linux-gnu/src/mod2c_core && /usr/bin/cc -DBBCORE=1 -DCVODE=1 -DNMODL=1 -DNOCMODL=1 -DUSE_LEGACY_UNITS=0 -DVECTORIZE=1 -I/build/nrn-mod2c-0.9+git220919/src/mod2c_core -I/build/nrn-mod2c-0.9+git220919/obj-x86_64-linux-gnu/src/mod2c_core -g -O2 -ffile-prefix-map=/build/nrn-mod2c-0.9+git220919=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -g -fstack-protector-all -MD -MT src/mod2c_core/CMakeFiles/mod2c_core.dir/parsact.c.o -MF CMakeFiles/mod2c_core.dir/parsact.c.o.d -o CMakeFiles/mod2c_core.dir/parsact.c.o -c /build/nrn-mod2c-0.9+git220919/src/mod2c_core/parsact.c +cd /build/nrn-mod2c-0.9+git220919/obj-x86_64-linux-gnu/src/mod2c_core && /usr/bin/cc -DBBCORE=1 -DCVODE=1 -DNMODL=1 -DNOCMODL=1 -DUSE_LEGACY_UNITS=0 -DVECTORIZE=1 -I/build/nrn-mod2c-0.9+git220919/src/mod2c_core -I/build/nrn-mod2c-0.9+git220919/obj-x86_64-linux-gnu/src/mod2c_core -g -O2 -ffile-prefix-map=/build/nrn-mod2c-0.9+git220919=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -g -fstack-protector-all -MD -MT src/mod2c_core/CMakeFiles/mod2c_core.dir/symbol.c.o -MF CMakeFiles/mod2c_core.dir/symbol.c.o.d -o CMakeFiles/mod2c_core.dir/symbol.c.o -c /build/nrn-mod2c-0.9+git220919/src/mod2c_core/symbol.c cd /build/nrn-mod2c-0.9+git220919/obj-x86_64-linux-gnu/src/mod2c_core && /usr/bin/cc -DBBCORE=1 -DCVODE=1 -DNMODL=1 -DNOCMODL=1 -DUSE_LEGACY_UNITS=0 -DVECTORIZE=1 -I/build/nrn-mod2c-0.9+git220919/src/mod2c_core -I/build/nrn-mod2c-0.9+git220919/obj-x86_64-linux-gnu/src/mod2c_core -g -O2 -ffile-prefix-map=/build/nrn-mod2c-0.9+git220919=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -g -fstack-protector-all -MD -MT src/mod2c_core/CMakeFiles/mod2c_core.dir/deriv.c.o -MF CMakeFiles/mod2c_core.dir/deriv.c.o.d -o CMakeFiles/mod2c_core.dir/deriv.c.o -c /build/nrn-mod2c-0.9+git220919/src/mod2c_core/deriv.c [ 72%] Building C object src/mod2c_core/CMakeFiles/mod2c_core.dir/init.c.o -[ 76%] Building C object src/mod2c_core/CMakeFiles/mod2c_core.dir/noccout.c.o cd /build/nrn-mod2c-0.9+git220919/obj-x86_64-linux-gnu/src/mod2c_core && /usr/bin/cc -DBBCORE=1 -DCVODE=1 -DNMODL=1 -DNOCMODL=1 -DUSE_LEGACY_UNITS=0 -DVECTORIZE=1 -I/build/nrn-mod2c-0.9+git220919/src/mod2c_core -I/build/nrn-mod2c-0.9+git220919/obj-x86_64-linux-gnu/src/mod2c_core -g -O2 -ffile-prefix-map=/build/nrn-mod2c-0.9+git220919=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -g -fstack-protector-all -MD -MT src/mod2c_core/CMakeFiles/mod2c_core.dir/init.c.o -MF CMakeFiles/mod2c_core.dir/init.c.o.d -o CMakeFiles/mod2c_core.dir/init.c.o -c /build/nrn-mod2c-0.9+git220919/src/mod2c_core/init.c +[ 76%] Building C object src/mod2c_core/CMakeFiles/mod2c_core.dir/noccout.c.o cd /build/nrn-mod2c-0.9+git220919/obj-x86_64-linux-gnu/src/mod2c_core && /usr/bin/cc -DBBCORE=1 -DCVODE=1 -DNMODL=1 -DNOCMODL=1 -DUSE_LEGACY_UNITS=0 -DVECTORIZE=1 -I/build/nrn-mod2c-0.9+git220919/src/mod2c_core -I/build/nrn-mod2c-0.9+git220919/obj-x86_64-linux-gnu/src/mod2c_core -g -O2 -ffile-prefix-map=/build/nrn-mod2c-0.9+git220919=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -g -fstack-protector-all -MD -MT src/mod2c_core/CMakeFiles/mod2c_core.dir/noccout.c.o -MF CMakeFiles/mod2c_core.dir/noccout.c.o.d -o CMakeFiles/mod2c_core.dir/noccout.c.o -c /build/nrn-mod2c-0.9+git220919/src/mod2c_core/noccout.c [ 80%] Building C object src/mod2c_core/CMakeFiles/mod2c_core.dir/simultan.c.o cd /build/nrn-mod2c-0.9+git220919/obj-x86_64-linux-gnu/src/mod2c_core && /usr/bin/cc -DBBCORE=1 -DCVODE=1 -DNMODL=1 -DNOCMODL=1 -DUSE_LEGACY_UNITS=0 -DVECTORIZE=1 -I/build/nrn-mod2c-0.9+git220919/src/mod2c_core -I/build/nrn-mod2c-0.9+git220919/obj-x86_64-linux-gnu/src/mod2c_core -g -O2 -ffile-prefix-map=/build/nrn-mod2c-0.9+git220919=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -g -fstack-protector-all -MD -MT src/mod2c_core/CMakeFiles/mod2c_core.dir/simultan.c.o -MF CMakeFiles/mod2c_core.dir/simultan.c.o.d -o CMakeFiles/mod2c_core.dir/simultan.c.o -c /build/nrn-mod2c-0.9+git220919/src/mod2c_core/simultan.c +[ 84%] Building C object src/mod2c_core/CMakeFiles/mod2c_core.dir/units.c.o +cd /build/nrn-mod2c-0.9+git220919/obj-x86_64-linux-gnu/src/mod2c_core && /usr/bin/cc -DBBCORE=1 -DCVODE=1 -DNMODL=1 -DNOCMODL=1 -DUSE_LEGACY_UNITS=0 -DVECTORIZE=1 -I/build/nrn-mod2c-0.9+git220919/src/mod2c_core -I/build/nrn-mod2c-0.9+git220919/obj-x86_64-linux-gnu/src/mod2c_core -g -O2 -ffile-prefix-map=/build/nrn-mod2c-0.9+git220919=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -g -fstack-protector-all -MD -MT src/mod2c_core/CMakeFiles/mod2c_core.dir/units.c.o -MF CMakeFiles/mod2c_core.dir/units.c.o.d -o CMakeFiles/mod2c_core.dir/units.c.o -c /build/nrn-mod2c-0.9+git220919/src/mod2c_core/units.c +[ 88%] Building C object src/mod2c_core/CMakeFiles/mod2c_core.dir/diffeq.c.o +cd /build/nrn-mod2c-0.9+git220919/obj-x86_64-linux-gnu/src/mod2c_core && /usr/bin/cc -DBBCORE=1 -DCVODE=1 -DNMODL=1 -DNOCMODL=1 -DUSE_LEGACY_UNITS=0 -DVECTORIZE=1 -I/build/nrn-mod2c-0.9+git220919/src/mod2c_core -I/build/nrn-mod2c-0.9+git220919/obj-x86_64-linux-gnu/src/mod2c_core -g -O2 -ffile-prefix-map=/build/nrn-mod2c-0.9+git220919=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -g -fstack-protector-all -MD -MT src/mod2c_core/CMakeFiles/mod2c_core.dir/diffeq.c.o -MF CMakeFiles/mod2c_core.dir/diffeq.c.o.d -o CMakeFiles/mod2c_core.dir/diffeq.c.o -c /build/nrn-mod2c-0.9+git220919/obj-x86_64-linux-gnu/src/mod2c_core/diffeq.c /build/nrn-mod2c-0.9+git220919/src/mod2c_core/sens.c: In function 'sensmassage': /build/nrn-mod2c-0.9+git220919/src/mod2c_core/sens.c:258:40: warning: '__builtin___sprintf_chk' may write a terminating nul past the end of the destination [-Wformat-overflow=] 258 | Sprintf(dname, "D%s", sname); @@ -579,10 +626,6 @@ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ -[ 84%] Building C object src/mod2c_core/CMakeFiles/mod2c_core.dir/units.c.o -cd /build/nrn-mod2c-0.9+git220919/obj-x86_64-linux-gnu/src/mod2c_core && /usr/bin/cc -DBBCORE=1 -DCVODE=1 -DNMODL=1 -DNOCMODL=1 -DUSE_LEGACY_UNITS=0 -DVECTORIZE=1 -I/build/nrn-mod2c-0.9+git220919/src/mod2c_core -I/build/nrn-mod2c-0.9+git220919/obj-x86_64-linux-gnu/src/mod2c_core -g -O2 -ffile-prefix-map=/build/nrn-mod2c-0.9+git220919=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -g -fstack-protector-all -MD -MT src/mod2c_core/CMakeFiles/mod2c_core.dir/units.c.o -MF CMakeFiles/mod2c_core.dir/units.c.o.d -o CMakeFiles/mod2c_core.dir/units.c.o -c /build/nrn-mod2c-0.9+git220919/src/mod2c_core/units.c -[ 88%] Building C object src/mod2c_core/CMakeFiles/mod2c_core.dir/diffeq.c.o -cd /build/nrn-mod2c-0.9+git220919/obj-x86_64-linux-gnu/src/mod2c_core && /usr/bin/cc -DBBCORE=1 -DCVODE=1 -DNMODL=1 -DNOCMODL=1 -DUSE_LEGACY_UNITS=0 -DVECTORIZE=1 -I/build/nrn-mod2c-0.9+git220919/src/mod2c_core -I/build/nrn-mod2c-0.9+git220919/obj-x86_64-linux-gnu/src/mod2c_core -g -O2 -ffile-prefix-map=/build/nrn-mod2c-0.9+git220919=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -g -fstack-protector-all -MD -MT src/mod2c_core/CMakeFiles/mod2c_core.dir/diffeq.c.o -MF CMakeFiles/mod2c_core.dir/diffeq.c.o.d -o CMakeFiles/mod2c_core.dir/diffeq.c.o -c /build/nrn-mod2c-0.9+git220919/obj-x86_64-linux-gnu/src/mod2c_core/diffeq.c [ 92%] Building C object src/mod2c_core/CMakeFiles/mod2c_core.dir/parse1.c.o cd /build/nrn-mod2c-0.9+git220919/obj-x86_64-linux-gnu/src/mod2c_core && /usr/bin/cc -DBBCORE=1 -DCVODE=1 -DNMODL=1 -DNOCMODL=1 -DUSE_LEGACY_UNITS=0 -DVECTORIZE=1 -I/build/nrn-mod2c-0.9+git220919/src/mod2c_core -I/build/nrn-mod2c-0.9+git220919/obj-x86_64-linux-gnu/src/mod2c_core -g -O2 -ffile-prefix-map=/build/nrn-mod2c-0.9+git220919=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -g -fstack-protector-all -MD -MT src/mod2c_core/CMakeFiles/mod2c_core.dir/parse1.c.o -MF CMakeFiles/mod2c_core.dir/parse1.c.o.d -o CMakeFiles/mod2c_core.dir/parse1.c.o -c /build/nrn-mod2c-0.9+git220919/obj-x86_64-linux-gnu/src/mod2c_core/parse1.c [ 96%] Building C object src/mod2c_core/CMakeFiles/mod2c_core.dir/lex.c.o @@ -638,10 +681,10 @@ /usr/bin/cmake -E cmake_progress_start /build/nrn-mod2c-0.9+git220919/obj-x86_64-linux-gnu/CMakeFiles 0 make[1]: Leaving directory '/build/nrn-mod2c-0.9+git220919/obj-x86_64-linux-gnu' dh_auto_test - cd obj-x86_64-linux-gnu && make -j16 test ARGS\+=--verbose ARGS\+=-j16 + cd obj-x86_64-linux-gnu && make -j15 test ARGS\+=--verbose ARGS\+=-j15 make[1]: Entering directory '/build/nrn-mod2c-0.9+git220919/obj-x86_64-linux-gnu' Running tests... -/usr/bin/ctest --force-new-ctest-process --verbose -j16 +/usr/bin/ctest --force-new-ctest-process --verbose -j15 UpdateCTestConfiguration from :/build/nrn-mod2c-0.9+git220919/obj-x86_64-linux-gnu/DartConfiguration.tcl Parse Config file:/build/nrn-mod2c-0.9+git220919/obj-x86_64-linux-gnu/DartConfiguration.tcl UpdateCTestConfiguration from :/build/nrn-mod2c-0.9+git220919/obj-x86_64-linux-gnu/DartConfiguration.tcl @@ -776,115 +819,115 @@ 2: Translating Nap.mod into Nap.cpp 2: Thread Safe 2: cvode_emit=0 cvode_not_allowed=0 +1: Translating NaSm.mod into NaSm.cpp +1: Thread Safe +1: cvode_emit=0 cvode_not_allowed=0 +5: Translating Nap_E.mod into Nap_E.cpp +5: Thread Safe +5: cvode_emit=0 cvode_not_allowed=0 +4: Translating NapIn.mod into NapIn.cpp +4: Thread Safe +4: cvode_emit=0 cvode_not_allowed=0 +6: Translating Nap_No.mod into Nap_No.cpp +6: Thread Safe +6: cvode_emit=0 cvode_not_allowed=0 +9: Translating SynNMDA10_2_2.mod into SynNMDA10_2_2.cpp +9: NEURON's CVode method ignores conservation +9: Thread Safe +9: cvode_emit=0 cvode_not_allowed=0 3: Translating NapDA.mod into NapDA.cpp 3: Thread Safe 3: cvode_emit=0 cvode_not_allowed=0 -6: Translating Nap_No.mod into Nap_No.cpp 8: Translating SynNMDA10_2.mod into SynNMDA10_2.cpp -6: Thread Safe -6: cvode_emit=0 cvode_not_allowed=0 8: NEURON's CVode method ignores conservation 8: Thread Safe 8: cvode_emit=0 cvode_not_allowed=0 -4: Translating NapIn.mod into NapIn.cpp -4: Thread Safe -4: cvode_emit=0 cvode_not_allowed=0 -1: Translating NaSm.mod into NaSm.cpp -1: Thread Safe -1: cvode_emit=0 cvode_not_allowed=0 -14: Translating vecevent.mod into vecevent.cpp -14: Thread Safe -14: cvode_emit=0 cvode_not_allowed=0 -14: Notice: ARTIFICIAL_CELL is a synonym for POINT_PROCESS which hints that it -14: only affects and is affected by discrete events. As such it is not -14: located in a section and is not associated with an integrator -5: Translating Nap_E.mod into Nap_E.cpp -5: Thread Safe -5: cvode_emit=0 cvode_not_allowed=0 -10: Translating SynNMDA16.mod into SynNMDA16.cpp -10: NEURON's CVode method ignores conservation -12: Translating is.mod into is.cpp -12: Thread Safe -12: cvode_emit=0 cvode_not_allowed=0 7: Translating SynNMDA10_1.mod into SynNMDA10_1.cpp 7: NEURON's CVode method ignores conservation +12: Translating is.mod into is.cpp 7: Thread Safe 7: cvode_emit=0 cvode_not_allowed=0 -10: Thread Safe -10: cvode_emit=0 cvode_not_allowed=0 -11: Translating SynNMDA16_2.mod into SynNMDA16_2.cpp -11: NEURON's CVode method ignores conservation -11: Thread Safe -11: cvode_emit=0 cvode_not_allowed=0 +12: Thread Safe +12: cvode_emit=0 cvode_not_allowed=0 15: Translating zoidsyn.mod into zoidsyn.cpp 15: Thread Safe 15: cvode_emit=0 cvode_not_allowed=0 -9: Translating SynNMDA10_2_2.mod into SynNMDA10_2_2.cpp -9: NEURON's CVode method ignores conservation -9: Thread Safe -9: cvode_emit=0 cvode_not_allowed=0 13: Translating isi.mod into isi.cpp 13: INCLUDEing Unit.inc 13: INCLUDEing Volume.inc 13: Thread Safe 13: cvode_emit=0 cvode_not_allowed=0 -2: comparing 2310 tokens: -2: ok - 1/15 Test #2: mod2c_core-Nap ................... Passed 0.31 sec -6: comparing 2395 tokens: +14: Translating vecevent.mod into vecevent.cpp +14: Thread Safe +14: cvode_emit=0 cvode_not_allowed=0 +14: Notice: ARTIFICIAL_CELL is a synonym for POINT_PROCESS which hints that it +14: only affects and is affected by discrete events. As such it is not +14: located in a section and is not associated with an integrator 4: comparing 2537 tokens: +5: comparing 3205 tokens: +5: ok +1: comparing 2457 tokens: 4: ok -3: comparing 3659 tokens: + 1/15 Test #4: mod2c_core-NapIn ................. Passed 0.36 sec + 2/15 Test #5: mod2c_core-Nap_E ................. Passed 0.36 sec +1: ok + 3/15 Test #1: mod2c_core-NaSm .................. Passed 0.37 sec +11: Translating SynNMDA16_2.mod into SynNMDA16_2.cpp +11: NEURON's CVode method ignores conservation +11: Thread Safe +11: cvode_emit=0 cvode_not_allowed=0 +2: comparing 2310 tokens: +6: comparing 2395 tokens: 6: ok - 2/15 Test #4: mod2c_core-NapIn ................. Passed 0.35 sec - 3/15 Test #6: mod2c_core-Nap_No ................ Passed 0.34 sec +2: ok + 4/15 Test #6: mod2c_core-Nap_No ................ Passed 0.39 sec + 5/15 Test #2: mod2c_core-Nap ................... Passed 0.41 sec +3: comparing 3659 tokens: +9: comparing 9635 tokens: 3: ok -14: comparing 1244 tokens: - 4/15 Test #3: mod2c_core-NapDA ................. Passed 0.37 sec -1: comparing 2457 tokens: -14: ok -8: comparing 9545 tokens: -1: ok -8: ok +9: ok 15: comparing 2876 tokens: 15: ok - 5/15 Test #1: mod2c_core-NaSm .................. Passed 0.39 sec - 6/15 Test #8: mod2c_core-SynNMDA10_2 ........... Passed 0.37 sec - 7/15 Test #14: mod2c_core-vecevent .............. Passed 0.34 sec - 8/15 Test #15: mod2c_core-zoidsyn ............... Passed 0.33 sec -12: comparing 3926 tokens: -12: ok - 9/15 Test #12: mod2c_core-is .................... Passed 0.37 sec -5: comparing 3205 tokens: -5: ok -10/15 Test #5: mod2c_core-Nap_E ................. Passed 0.41 sec -10: comparing 15133 tokens: -10: ok -11/15 Test #10: mod2c_core-SynNMDA16 ............. Passed 0.40 sec + 6/15 Test #3: mod2c_core-NapDA ................. Passed 0.45 sec + 7/15 Test #9: mod2c_core-SynNMDA10_2_2 ......... Passed 0.43 sec + 8/15 Test #15: mod2c_core-zoidsyn ............... Passed 0.40 sec +10: Translating SynNMDA16.mod into SynNMDA16.cpp +10: NEURON's CVode method ignores conservation +14: comparing 1244 tokens: +10: Thread Safe +10: cvode_emit=0 cvode_not_allowed=0 +14: ok 13: comparing 6147 tokens: 13: ok -12/15 Test #13: mod2c_core-isi ................... Passed 0.40 sec + 9/15 Test #14: mod2c_core-vecevent .............. Passed 0.42 sec +12: comparing 3926 tokens: +10/15 Test #13: mod2c_core-isi ................... Passed 0.43 sec +12: ok +8: comparing 9545 tokens: +8: ok +11/15 Test #12: mod2c_core-is .................... Passed 0.47 sec 7: comparing 13732 tokens: -9: comparing 9635 tokens: +12/15 Test #8: mod2c_core-SynNMDA10_2 ........... Passed 0.51 sec 7: ok -9: ok -13/15 Test #7: mod2c_core-SynNMDA10_1 ........... Passed 0.43 sec -14/15 Test #9: mod2c_core-SynNMDA10_2_2 ......... Passed 0.42 sec +13/15 Test #7: mod2c_core-SynNMDA10_1 ........... Passed 0.52 sec +10: comparing 15133 tokens: +10: ok 11: comparing 15471 tokens: 11: ok -15/15 Test #11: mod2c_core-SynNMDA16_2 ........... Passed 0.42 sec +14/15 Test #10: mod2c_core-SynNMDA16 ............. Passed 0.67 sec +15/15 Test #11: mod2c_core-SynNMDA16_2 ........... Passed 0.68 sec 100% tests passed, 0 tests failed out of 15 Label Time Summary: -validation = 5.64 sec*proc (15 tests) +validation = 6.86 sec*proc (15 tests) -Total Test time (real) = 0.45 sec +Total Test time (real) = 0.72 sec make[1]: Leaving directory '/build/nrn-mod2c-0.9+git220919/obj-x86_64-linux-gnu' create-stamp debian/debhelper-build-stamp dh_prep dh_auto_install --destdir=debian/nrn-mod2c/ - cd obj-x86_64-linux-gnu && make -j16 install DESTDIR=/build/nrn-mod2c-0.9\+git220919/debian/nrn-mod2c AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" + cd obj-x86_64-linux-gnu && make -j15 install DESTDIR=/build/nrn-mod2c-0.9\+git220919/debian/nrn-mod2c AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/nrn-mod2c-0.9+git220919/obj-x86_64-linux-gnu' /usr/bin/cmake -S/build/nrn-mod2c-0.9+git220919 -B/build/nrn-mod2c-0.9+git220919/obj-x86_64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 preinstall @@ -922,12 +965,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/3949300/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/3949300/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/1819018 and its subdirectories -I: Current time: Fri May 24 00:58:11 -12 2024 -I: pbuilder-time-stamp: 1716555491 +I: removing directory /srv/workspace/pbuilder/3949300 and its subdirectories +I: Current time: Sat Apr 22 20:36:09 +14 2023 +I: pbuilder-time-stamp: 1682145369