Diff of the two buildlogs: -- --- b1/build.log 2023-05-06 15:28:43.315974613 +0000 +++ b2/build.log 2023-05-06 15:30:47.186543168 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Sat May 6 03:26:26 -12 2023 -I: pbuilder-time-stamp: 1683386786 +I: Current time: Sat Jun 8 11:51:45 +14 2024 +I: pbuilder-time-stamp: 1717797105 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bookworm-reproducible-base.tgz] I: copying local configuration @@ -16,7 +16,7 @@ I: copying [./libminc_2.4.05.orig.tar.gz] I: copying [./libminc_2.4.05-4.debian.tar.xz] I: Extracting source -gpgv: Signature made Thu Sep 1 15:39:59 2022 -12 +gpgv: Signature made Fri Sep 2 17:39:59 2022 +14 gpgv: using RSA key CBCF64F1F6B7ADC94D8F2A24C9E55E2FADC8F4B9 gpgv: issuer "smr@debian.org" gpgv: Can't check signature: No public key @@ -32,135 +32,167 @@ dpkg-source: info: applying 0005-Disable-setting-RPATH.patch I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/3106525/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/2026746/tmp/hooks/D01_modify_environment starting +debug: Running on ionos15-amd64. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Jun 8 11:51 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/2026746/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/2026746/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='amd64' - DEBIAN_FRONTEND='noninteractive' - DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=15' - DISTRIBUTION='bookworm' - HOME='/root' - HOST_ARCH='amd64' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="2" [2]="15" [3]="1" [4]="release" [5]="x86_64-pc-linux-gnu") + BASH_VERSION='5.2.15(1)-release' + BUILDDIR=/build + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=amd64 + DEBIAN_FRONTEND=noninteractive + DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=16' + DIRSTACK=() + DISTRIBUTION=bookworm + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=x86_64 + HOST_ARCH=amd64 IFS=' ' - INVOCATION_ID='a738cbfde221476a82adbb8cbf769db3' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='3106525' - PS1='# ' - PS2='> ' + INVOCATION_ID=f2f6dafb7a594650b184a7fcf0ef07b0 + LANG=C + LANGUAGE=et_EE:et + LC_ALL=C + MACHTYPE=x86_64-pc-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=2026746 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.CiiCbTTr/pbuilderrc_NiGD --distribution bookworm --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bookworm-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.CiiCbTTr/b1 --logfile b1/build.log libminc_2.4.05-4.dsc' - SUDO_GID='111' - SUDO_UID='106' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://78.137.99.97:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.CiiCbTTr/pbuilderrc_gIqK --distribution bookworm --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bookworm-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.CiiCbTTr/b2 --logfile b2/build.log --extrapackages usrmerge libminc_2.4.05-4.dsc' + SUDO_GID=111 + SUDO_UID=106 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://85.184.249.68:3128 I: uname -a - Linux ionos11-amd64 5.10.0-22-amd64 #1 SMP Debian 5.10.178-3 (2023-04-22) x86_64 GNU/Linux + Linux i-capture-the-hostname 6.1.0-0.deb11.6-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.15-1~bpo11+1 (2023-03-16) x86_64 GNU/Linux I: ls -l /bin total 5632 - -rwxr-xr-x 1 root root 1265648 Apr 23 09:23 bash - -rwxr-xr-x 3 root root 39224 Sep 18 2022 bunzip2 - -rwxr-xr-x 3 root root 39224 Sep 18 2022 bzcat - lrwxrwxrwx 1 root root 6 Sep 18 2022 bzcmp -> bzdiff - -rwxr-xr-x 1 root root 2225 Sep 18 2022 bzdiff - lrwxrwxrwx 1 root root 6 Sep 18 2022 bzegrep -> bzgrep - -rwxr-xr-x 1 root root 4893 Nov 27 2021 bzexe - lrwxrwxrwx 1 root root 6 Sep 18 2022 bzfgrep -> bzgrep - -rwxr-xr-x 1 root root 3775 Sep 18 2022 bzgrep - -rwxr-xr-x 3 root root 39224 Sep 18 2022 bzip2 - -rwxr-xr-x 1 root root 14568 Sep 18 2022 bzip2recover - lrwxrwxrwx 1 root root 6 Sep 18 2022 bzless -> bzmore - -rwxr-xr-x 1 root root 1297 Sep 18 2022 bzmore - -rwxr-xr-x 1 root root 44016 Sep 20 2022 cat - -rwxr-xr-x 1 root root 68656 Sep 20 2022 chgrp - -rwxr-xr-x 1 root root 64496 Sep 20 2022 chmod - -rwxr-xr-x 1 root root 72752 Sep 20 2022 chown - -rwxr-xr-x 1 root root 151152 Sep 20 2022 cp - -rwxr-xr-x 1 root root 125640 Jan 5 01:20 dash - -rwxr-xr-x 1 root root 121904 Sep 20 2022 date - -rwxr-xr-x 1 root root 89240 Sep 20 2022 dd - -rwxr-xr-x 1 root root 102200 Sep 20 2022 df - -rwxr-xr-x 1 root root 151344 Sep 20 2022 dir - -rwxr-xr-x 1 root root 88656 Mar 22 22:02 dmesg - lrwxrwxrwx 1 root root 8 Dec 19 01:33 dnsdomainname -> hostname - lrwxrwxrwx 1 root root 8 Dec 19 01:33 domainname -> hostname - -rwxr-xr-x 1 root root 43856 Sep 20 2022 echo - -rwxr-xr-x 1 root root 41 Jan 24 02:43 egrep - -rwxr-xr-x 1 root root 35664 Sep 20 2022 false - -rwxr-xr-x 1 root root 41 Jan 24 02:43 fgrep - -rwxr-xr-x 1 root root 85600 Mar 22 22:02 findmnt - -rwsr-xr-x 1 root root 35128 Mar 22 20:35 fusermount - -rwxr-xr-x 1 root root 203152 Jan 24 02:43 grep - -rwxr-xr-x 2 root root 2346 Apr 9 2022 gunzip - -rwxr-xr-x 1 root root 6447 Apr 9 2022 gzexe - -rwxr-xr-x 1 root root 98136 Apr 9 2022 gzip - -rwxr-xr-x 1 root root 22680 Dec 19 01:33 hostname - -rwxr-xr-x 1 root root 72824 Sep 20 2022 ln - -rwxr-xr-x 1 root root 53024 Mar 23 00:40 login - -rwxr-xr-x 1 root root 151344 Sep 20 2022 ls - -rwxr-xr-x 1 root root 207168 Mar 22 22:02 lsblk - -rwxr-xr-x 1 root root 97552 Sep 20 2022 mkdir - -rwxr-xr-x 1 root root 72912 Sep 20 2022 mknod - -rwxr-xr-x 1 root root 43952 Sep 20 2022 mktemp - -rwxr-xr-x 1 root root 59712 Mar 22 22:02 more - -rwsr-xr-x 1 root root 59704 Mar 22 22:02 mount - -rwxr-xr-x 1 root root 18744 Mar 22 22:02 mountpoint - -rwxr-xr-x 1 root root 142968 Sep 20 2022 mv - lrwxrwxrwx 1 root root 8 Dec 19 01:33 nisdomainname -> hostname - lrwxrwxrwx 1 root root 14 Apr 2 18:25 pidof -> /sbin/killall5 - -rwxr-xr-x 1 root root 43952 Sep 20 2022 pwd - lrwxrwxrwx 1 root root 4 Apr 23 09:23 rbash -> bash - -rwxr-xr-x 1 root root 52112 Sep 20 2022 readlink - -rwxr-xr-x 1 root root 72752 Sep 20 2022 rm - -rwxr-xr-x 1 root root 56240 Sep 20 2022 rmdir - -rwxr-xr-x 1 root root 27560 Nov 2 2022 run-parts - -rwxr-xr-x 1 root root 126424 Jan 5 07:55 sed - lrwxrwxrwx 1 root root 4 Jan 5 01:20 sh -> dash - -rwxr-xr-x 1 root root 43888 Sep 20 2022 sleep - -rwxr-xr-x 1 root root 85008 Sep 20 2022 stty - -rwsr-xr-x 1 root root 72000 Mar 22 22:02 su - -rwxr-xr-x 1 root root 39824 Sep 20 2022 sync - -rwxr-xr-x 1 root root 531984 Apr 6 02:25 tar - -rwxr-xr-x 1 root root 14520 Nov 2 2022 tempfile - -rwxr-xr-x 1 root root 109616 Sep 20 2022 touch - -rwxr-xr-x 1 root root 35664 Sep 20 2022 true - -rwxr-xr-x 1 root root 14568 Mar 22 20:35 ulockmgr_server - -rwsr-xr-x 1 root root 35128 Mar 22 22:02 umount - -rwxr-xr-x 1 root root 43888 Sep 20 2022 uname - -rwxr-xr-x 2 root root 2346 Apr 9 2022 uncompress - -rwxr-xr-x 1 root root 151344 Sep 20 2022 vdir - -rwxr-xr-x 1 root root 72024 Mar 22 22:02 wdctl - lrwxrwxrwx 1 root root 8 Dec 19 01:33 ypdomainname -> hostname - -rwxr-xr-x 1 root root 1984 Apr 9 2022 zcat - -rwxr-xr-x 1 root root 1678 Apr 9 2022 zcmp - -rwxr-xr-x 1 root root 6460 Apr 9 2022 zdiff - -rwxr-xr-x 1 root root 29 Apr 9 2022 zegrep - -rwxr-xr-x 1 root root 29 Apr 9 2022 zfgrep - -rwxr-xr-x 1 root root 2081 Apr 9 2022 zforce - -rwxr-xr-x 1 root root 8103 Apr 9 2022 zgrep - -rwxr-xr-x 1 root root 2206 Apr 9 2022 zless - -rwxr-xr-x 1 root root 1842 Apr 9 2022 zmore - -rwxr-xr-x 1 root root 4577 Apr 9 2022 znew -I: user script /srv/workspace/pbuilder/3106525/tmp/hooks/D02_print_environment finished + -rwxr-xr-x 1 root root 1265648 Apr 24 2023 bash + -rwxr-xr-x 3 root root 39224 Sep 19 2022 bunzip2 + -rwxr-xr-x 3 root root 39224 Sep 19 2022 bzcat + lrwxrwxrwx 1 root root 6 Sep 19 2022 bzcmp -> bzdiff + -rwxr-xr-x 1 root root 2225 Sep 19 2022 bzdiff + lrwxrwxrwx 1 root root 6 Sep 19 2022 bzegrep -> bzgrep + -rwxr-xr-x 1 root root 4893 Nov 28 2021 bzexe + lrwxrwxrwx 1 root root 6 Sep 19 2022 bzfgrep -> bzgrep + -rwxr-xr-x 1 root root 3775 Sep 19 2022 bzgrep + -rwxr-xr-x 3 root root 39224 Sep 19 2022 bzip2 + -rwxr-xr-x 1 root root 14568 Sep 19 2022 bzip2recover + lrwxrwxrwx 1 root root 6 Sep 19 2022 bzless -> bzmore + -rwxr-xr-x 1 root root 1297 Sep 19 2022 bzmore + -rwxr-xr-x 1 root root 44016 Sep 21 2022 cat + -rwxr-xr-x 1 root root 68656 Sep 21 2022 chgrp + -rwxr-xr-x 1 root root 64496 Sep 21 2022 chmod + -rwxr-xr-x 1 root root 72752 Sep 21 2022 chown + -rwxr-xr-x 1 root root 151152 Sep 21 2022 cp + -rwxr-xr-x 1 root root 125640 Jan 6 2023 dash + -rwxr-xr-x 1 root root 121904 Sep 21 2022 date + -rwxr-xr-x 1 root root 89240 Sep 21 2022 dd + -rwxr-xr-x 1 root root 102200 Sep 21 2022 df + -rwxr-xr-x 1 root root 151344 Sep 21 2022 dir + -rwxr-xr-x 1 root root 88656 Mar 24 2023 dmesg + lrwxrwxrwx 1 root root 8 Dec 20 2022 dnsdomainname -> hostname + lrwxrwxrwx 1 root root 8 Dec 20 2022 domainname -> hostname + -rwxr-xr-x 1 root root 43856 Sep 21 2022 echo + -rwxr-xr-x 1 root root 41 Jan 25 2023 egrep + -rwxr-xr-x 1 root root 35664 Sep 21 2022 false + -rwxr-xr-x 1 root root 41 Jan 25 2023 fgrep + -rwxr-xr-x 1 root root 85600 Mar 24 2023 findmnt + -rwsr-xr-x 1 root root 35128 Mar 23 2023 fusermount + -rwxr-xr-x 1 root root 203152 Jan 25 2023 grep + -rwxr-xr-x 2 root root 2346 Apr 10 2022 gunzip + -rwxr-xr-x 1 root root 6447 Apr 10 2022 gzexe + -rwxr-xr-x 1 root root 98136 Apr 10 2022 gzip + -rwxr-xr-x 1 root root 22680 Dec 20 2022 hostname + -rwxr-xr-x 1 root root 72824 Sep 21 2022 ln + -rwxr-xr-x 1 root root 53024 Mar 24 2023 login + -rwxr-xr-x 1 root root 151344 Sep 21 2022 ls + -rwxr-xr-x 1 root root 207168 Mar 24 2023 lsblk + -rwxr-xr-x 1 root root 97552 Sep 21 2022 mkdir + -rwxr-xr-x 1 root root 72912 Sep 21 2022 mknod + -rwxr-xr-x 1 root root 43952 Sep 21 2022 mktemp + -rwxr-xr-x 1 root root 59712 Mar 24 2023 more + -rwsr-xr-x 1 root root 59704 Mar 24 2023 mount + -rwxr-xr-x 1 root root 18744 Mar 24 2023 mountpoint + -rwxr-xr-x 1 root root 142968 Sep 21 2022 mv + lrwxrwxrwx 1 root root 8 Dec 20 2022 nisdomainname -> hostname + lrwxrwxrwx 1 root root 14 Apr 3 2023 pidof -> /sbin/killall5 + -rwxr-xr-x 1 root root 43952 Sep 21 2022 pwd + lrwxrwxrwx 1 root root 4 Apr 24 2023 rbash -> bash + -rwxr-xr-x 1 root root 52112 Sep 21 2022 readlink + -rwxr-xr-x 1 root root 72752 Sep 21 2022 rm + -rwxr-xr-x 1 root root 56240 Sep 21 2022 rmdir + -rwxr-xr-x 1 root root 27560 Nov 3 2022 run-parts + -rwxr-xr-x 1 root root 126424 Jan 6 2023 sed + lrwxrwxrwx 1 root root 9 Jun 8 11:51 sh -> /bin/bash + -rwxr-xr-x 1 root root 43888 Sep 21 2022 sleep + -rwxr-xr-x 1 root root 85008 Sep 21 2022 stty + -rwsr-xr-x 1 root root 72000 Mar 24 2023 su + -rwxr-xr-x 1 root root 39824 Sep 21 2022 sync + -rwxr-xr-x 1 root root 531984 Apr 7 2023 tar + -rwxr-xr-x 1 root root 14520 Nov 3 2022 tempfile + -rwxr-xr-x 1 root root 109616 Sep 21 2022 touch + -rwxr-xr-x 1 root root 35664 Sep 21 2022 true + -rwxr-xr-x 1 root root 14568 Mar 23 2023 ulockmgr_server + -rwsr-xr-x 1 root root 35128 Mar 24 2023 umount + -rwxr-xr-x 1 root root 43888 Sep 21 2022 uname + -rwxr-xr-x 2 root root 2346 Apr 10 2022 uncompress + -rwxr-xr-x 1 root root 151344 Sep 21 2022 vdir + -rwxr-xr-x 1 root root 72024 Mar 24 2023 wdctl + lrwxrwxrwx 1 root root 8 Dec 20 2022 ypdomainname -> hostname + -rwxr-xr-x 1 root root 1984 Apr 10 2022 zcat + -rwxr-xr-x 1 root root 1678 Apr 10 2022 zcmp + -rwxr-xr-x 1 root root 6460 Apr 10 2022 zdiff + -rwxr-xr-x 1 root root 29 Apr 10 2022 zegrep + -rwxr-xr-x 1 root root 29 Apr 10 2022 zfgrep + -rwxr-xr-x 1 root root 2081 Apr 10 2022 zforce + -rwxr-xr-x 1 root root 8103 Apr 10 2022 zgrep + -rwxr-xr-x 1 root root 2206 Apr 10 2022 zless + -rwxr-xr-x 1 root root 1842 Apr 10 2022 zmore + -rwxr-xr-x 1 root root 4577 Apr 10 2022 znew +I: user script /srv/workspace/pbuilder/2026746/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -290,7 +322,7 @@ Get: 80 http://deb.debian.org/debian bookworm/main amd64 libznz-dev amd64 3.0.1-9 [14.3 kB] Get: 81 http://deb.debian.org/debian bookworm/main amd64 libnifti2-dev amd64 3.0.1-9 [98.6 kB] Get: 82 http://deb.debian.org/debian bookworm/main amd64 libnifti-dev all 3.0.1-9 [12.9 kB] -Fetched 54.5 MB in 1s (41.3 MB/s) +Fetched 54.5 MB in 1s (84.6 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libproc2-0:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19596 files and directories currently installed.) @@ -633,8 +665,19 @@ Writing extended state information... Building tag database... -> Finished parsing the build-deps +Reading package lists... +Building dependency tree... +Reading state information... +usrmerge is already the newest version (35). +0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: Building the package -I: Running cd /build/libminc-2.4.05/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../libminc_2.4.05-4_source.changes +I: user script /srv/workspace/pbuilder/2026746/tmp/hooks/A99_set_merged_usr starting +Re-configuring usrmerge... +removed '/etc/unsupported-skip-usrmerge-conversion' +The system has been successfully converted. +I: user script /srv/workspace/pbuilder/2026746/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/libminc-2.4.05/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../libminc_2.4.05-4_source.changes dpkg-buildpackage: info: source package libminc dpkg-buildpackage: info: source version 2.4.05-4 dpkg-buildpackage: info: source distribution unstable @@ -773,7 +816,7 @@ -- Build files have been written to: /build/libminc-2.4.05/obj-x86_64-linux-gnu make[1]: Leaving directory '/build/libminc-2.4.05' dh_auto_build - cd obj-x86_64-linux-gnu && make -j15 "INSTALL=install --strip-program=true" VERBOSE=1 + cd obj-x86_64-linux-gnu && make -j16 "INSTALL=install --strip-program=true" VERBOSE=1 make[1]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' /usr/bin/cmake -S/build/libminc-2.4.05 -B/build/libminc-2.4.05/obj-x86_64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/libminc-2.4.05/obj-x86_64-linux-gnu/CMakeFiles /build/libminc-2.4.05/obj-x86_64-linux-gnu//CMakeFiles/progress.marks @@ -791,36 +834,54 @@ make -f CMakeFiles/minc2.dir/build.make CMakeFiles/minc2.dir/build make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' -[ 1%] Building C object CMakeFiles/minc2_static.dir/libsrc2/dimension.c.o -[ 1%] Building C object CMakeFiles/minc2_static.dir/libsrc2/free.c.o -[ 2%] Building C object CMakeFiles/minc2_static.dir/libsrc2/convert.c.o -[ 2%] Building C object CMakeFiles/minc2_static.dir/libsrc2/grpattr.c.o -[ 3%] Building C object CMakeFiles/minc2_static.dir/libsrc2/hyper.c.o -[ 3%] Building C object CMakeFiles/minc2_static.dir/libsrc2/datatype.c.o +[ 0%] Building C object CMakeFiles/minc2_static.dir/libsrc2/datatype.c.o +[ 1%] Building C object CMakeFiles/minc2_static.dir/libsrc2/grpattr.c.o +[ 1%] Building C object CMakeFiles/minc2_static.dir/libsrc2/convert.c.o +[ 2%] Building C object CMakeFiles/minc2_static.dir/libsrc2/dimension.c.o +[ 2%] Building C object CMakeFiles/minc2_static.dir/libsrc2/free.c.o +[ 2%] Building C object CMakeFiles/minc2_static.dir/libsrc2/record.c.o +[ 3%] Building C object CMakeFiles/minc2_static.dir/libsrc2/m2util.c.o +[ 3%] Building C object CMakeFiles/minc2_static.dir/libsrc2/label.c.o [ 4%] Building C object CMakeFiles/minc2.dir/libsrc2/convert.c.o -[ 4%] Building C object CMakeFiles/minc2_static.dir/libsrc2/label.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/libsrc2/free.c.o -MF CMakeFiles/minc2_static.dir/libsrc2/free.c.o.d -o CMakeFiles/minc2_static.dir/libsrc2/free.c.o -c /build/libminc-2.4.05/libsrc2/free.c -[ 4%] Building C object 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-Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/libsrc2/datatype.c.o -MF CMakeFiles/minc2.dir/libsrc2/datatype.c.o.d -o CMakeFiles/minc2.dir/libsrc2/datatype.c.o -c /build/libminc-2.4.05/libsrc2/datatype.c +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/libsrc2/dimension.c.o -MF CMakeFiles/minc2.dir/libsrc2/dimension.c.o.d -o CMakeFiles/minc2.dir/libsrc2/dimension.c.o -c /build/libminc-2.4.05/libsrc2/dimension.c +[ 8%] Building C object CMakeFiles/minc2_static.dir/libsrc2/volprops.c.o +[ 7%] Building C object CMakeFiles/minc2.dir/libsrc2/free.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/libsrc2/free.c.o -MF CMakeFiles/minc2.dir/libsrc2/free.c.o.d -o CMakeFiles/minc2.dir/libsrc2/free.c.o -c /build/libminc-2.4.05/libsrc2/free.c +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/libsrc2/slice.c.o -MF CMakeFiles/minc2_static.dir/libsrc2/slice.c.o.d -o CMakeFiles/minc2_static.dir/libsrc2/slice.c.o -c /build/libminc-2.4.05/libsrc2/slice.c +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/libsrc2/valid.c.o -MF CMakeFiles/minc2_static.dir/libsrc2/valid.c.o.d -o CMakeFiles/minc2_static.dir/libsrc2/valid.c.o -c /build/libminc-2.4.05/libsrc2/valid.c +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/libsrc2/volprops.c.o -MF CMakeFiles/minc2_static.dir/libsrc2/volprops.c.o.d -o CMakeFiles/minc2_static.dir/libsrc2/volprops.c.o -c /build/libminc-2.4.05/libsrc2/volprops.c +/build/libminc-2.4.05/libsrc2/label.c: In function 'miswap4': +/build/libminc-2.4.05/libsrc2/label.c:40:12: warning: conversion to 'int' from 'unsigned int' may change the sign of the result [-Wsign-conversion] + 40 | return (tmp); + | ^ +/build/libminc-2.4.05/libsrc2/label.c: In function 'miget_label_value_by_index': +/build/libminc-2.4.05/libsrc2/label.c:199:51: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + 199 | result = H5Tget_member_value(volume->mtype_id,idx,value); + | ^~~ +/build/libminc-2.4.05/libsrc2/record.c: In function 'miget_record_field_name': +/build/libminc-2.4.05/libsrc2/record.c:57:50: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + 57 | *name = H5Tget_member_name(volume->ftype_id, index); + | ^~~~~ +/build/libminc-2.4.05/libsrc2/record.c: In function 'miset_record_field_name': +/build/libminc-2.4.05/libsrc2/record.c:91:20: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 91 | offset = index * H5Tget_size(ftype_id); + | ^ /build/libminc-2.4.05/libsrc2/convert.c: In function 'miconvert_voxel_to_real': /build/libminc-2.4.05/libsrc2/convert.c:115:39: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 115 | miget_slice_range(volume, coords, ncoords, &slice_max, &slice_min); @@ -836,96 +897,6 @@ /build/libminc-2.4.05/libsrc2/convert.c:562:23: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 562 | buffer = malloc(n * sizeof(double)); | ^ -/build/libminc-2.4.05/libsrc2/dimension.c: In function 'miget_volume_dimensions': -/build/libminc-2.4.05/libsrc2/hyper.c: In function 'mirw_hyperslab_raw': -/build/libminc-2.4.05/libsrc2/dimension.c:417:20: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 417 | number_of_dims = volume->number_of_dims; - | ^~~~~~ -/build/libminc-2.4.05/libsrc2/dimension.c:422:16: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 422 | max_dims = array_length; - | ^~~~~~~~~~~~ -/build/libminc-2.4.05/libsrc2/hyper.c:261:25: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 261 | restructure_array(ndims, buffer, icount, H5Tget_size(type_id), - | ^~~~~ -/build/libminc-2.4.05/libsrc2/hyper.c:299:25: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 299 | restructure_array(ndims, temp_buffer, icount, H5Tget_size(type_id), - | ^~~~~ -/build/libminc-2.4.05/libsrc2/dimension.c: In function 'miset_apparent_dimension_order': -/build/libminc-2.4.05/libsrc2/dimension.c:486:69: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - 486 | volume->dim_indices = ( int * ) malloc ( volume->number_of_dims * sizeof ( int ) ); - | ^ -/build/libminc-2.4.05/libsrc2/dimension.c: In function 'miset_apparent_dimension_order_by_name': -/build/libminc-2.4.05/libsrc2/dimension.c:580:69: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - 580 | volume->dim_indices = ( int * ) malloc ( volume->number_of_dims * sizeof ( int ) ); - | ^ -/build/libminc-2.4.05/libsrc2/hyper.c: In function 'mirw_hyperslab_icv': -/build/libminc-2.4.05/libsrc2/hyper.c:436:11: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 436 | ndims = volume->number_of_dims; - | ^~~~~~ -/build/libminc-2.4.05/libsrc2/hyper.c:448:32: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] - 448 | mspc_id = H5Screate_simple(ndims, hdf_count, NULL); - | ^~~~~ -/build/libminc-2.4.05/libsrc2/hyper.c:456:44: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] - 456 | miget_hyperslab_size_hdf(buffer_type_id, ndims, hdf_count, &buffer_size); - | ^~~~~ -/build/libminc-2.4.05/libsrc2/hyper.c:499:21: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] - 499 | slice_ndims = ndims; - | ^~~~~ -/build/libminc-2.4.05/libsrc2/hyper.c:510:14: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 510 | for (i = slice_ndims; i < ndims; i++ ) { - | ^~~~~~~~~~~ -/build/libminc-2.4.05/libsrc2/dimension.c: In function 'miget_dimension_offsets': -/build/libminc-2.4.05/libsrc2/dimension.c:1036:43: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'double' may change value [-Wconversion] - 1036 | offsets[j] = dimension->start + ( i * dimension->step ); - | ^ -/build/libminc-2.4.05/libsrc2/dimension.c: In function 'miset_dimension_sampling_flag': -/build/libminc-2.4.05/libsrc2/dimension.c:1136:21: warning: unsigned conversion from 'int' to 'midimattr_t' {aka 'unsigned int'} changes value from '-2' to '4294967294' [-Wsign-conversion] - 1136 | dimension->attr &= ~MI_DIMATTR_REGULARLY_SAMPLED; - | ^~ -/build/libminc-2.4.05/libsrc2/dimension.c:1138:21: warning: unsigned conversion from 'int' to 'midimattr_t' {aka 'unsigned int'} changes value from '-3' to '4294967293' [-Wsign-conversion] - 1138 | dimension->attr &= ~MI_DIMATTR_NOT_REGULARLY_SAMPLED; - | ^~ -/build/libminc-2.4.05/libsrc2/dimension.c: In function 'miget_dimension_start': -/build/libminc-2.4.05/libsrc2/dimension.c:1356:57: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'double' may change value [-Wconversion] - 1356 | *start_ptr = dimension->start + ( dimension->step * ( dimension->length - 1 ) ); - | ^ -/build/libminc-2.4.05/libsrc2/hyper.c:680:40: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] - 680 | imap[volume->dim_indices[i]] = i; - | ^ -/build/libminc-2.4.05/libsrc2/dimension.c:1362:61: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'double' may change value [-Wconversion] - 1362 | *start_ptr = dimension->start + ( dimension->step * ( dimension->length - 1 ) ); - | ^ -/build/libminc-2.4.05/libsrc2/dimension.c:1369:63: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'double' may change value [-Wconversion] - 1369 | *start_ptr = dimension->start + ( dimension->step * ( dimension->length - 1 ) ); - | ^ -/build/libminc-2.4.05/libsrc2/hyper.c: In function 'mirw_hyperslab_normalized': -/build/libminc-2.4.05/libsrc2/hyper.c:925:11: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 925 | ndims = volume->number_of_dims; - | ^~~~~~ -In file included from /build/libminc-2.4.05/libcommon/minc2_error.h:38, - from /build/libminc-2.4.05/libsrc2/minc2.h:11, - from /build/libminc-2.4.05/libsrc2/hyper.c:19: -/build/libminc-2.4.05/libsrc2/hyper.c:936:50: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] - 936 | MI_CHECK_HDF_CALL(mspc_id = H5Screate_simple(ndims, hdf_count, NULL),"H5Screate_simple"); - | ^~~~~ -/build/libminc-2.4.05/libcommon/minc_error.h:188:42: note: in definition of macro 'MI_CHECK_HDF_CALL' - 188 | #define MI_CHECK_HDF_CALL(var,call) {if((var)<0) MI_LOG_ERROR(MI2_MSG_HDF5,call);} - | ^~~ -/build/libminc-2.4.05/libsrc2/hyper.c:943:43: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] - 943 | miget_hyperslab_size_hdf(volume_type_id,ndims,hdf_count,&buffer_size); - | ^~~~~ -/build/libminc-2.4.05/libsrc2/hyper.c:944:43: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] - 944 | miget_hyperslab_size_hdf(buffer_type_id,ndims,hdf_count,&input_buffer_size); - | ^~~~~ -/build/libminc-2.4.05/libsrc2/hyper.c:983:21: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] - 983 | slice_ndims = ndims; - | ^~~~~ -/build/libminc-2.4.05/libsrc2/hyper.c:994:14: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 994 | for (i = slice_ndims; i < ndims; i++ ) { - | ^~~~~~~~~~~ -/build/libminc-2.4.05/libsrc2/hyper.c:1122:40: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] - 1122 | imap[volume->dim_indices[i]] = i; - | ^ /build/libminc-2.4.05/libsrc2/hyper.c: In function 'mirw_hyperslab_raw': /build/libminc-2.4.05/libsrc2/hyper.c:261:25: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 261 | restructure_array(ndims, buffer, icount, H5Tget_size(type_id), @@ -952,10 +923,37 @@ /build/libminc-2.4.05/libsrc2/hyper.c:680:40: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] 680 | imap[volume->dim_indices[i]] = i; | ^ +/build/libminc-2.4.05/libsrc2/m2util.c: In function 'midownsample_slice': +/build/libminc-2.4.05/libsrc2/m2util.c:1491:18: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 1491 | x1 = x; + | ^ +/build/libminc-2.4.05/libsrc2/m2util.c:1492:26: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 1492 | y1 = y + ( j * scale ); + | ^ +/build/libminc-2.4.05/libsrc2/m2util.c:1492:20: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 1492 | y1 = y + ( j * scale ); + | ^ +/build/libminc-2.4.05/libsrc2/m2util.c:1493:26: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 1493 | z1 = z + ( k * scale ); + | ^ +/build/libminc-2.4.05/libsrc2/m2util.c:1493:20: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 1493 | z1 = z + ( k * scale ); + | ^ +/build/libminc-2.4.05/libsrc2/m2util.c: In function 'miconvert_hyperslab_to_real': +/build/libminc-2.4.05/libsrc2/m2util.c:1602:46: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 1602 | r = miget_slice_range ( volume, pos, volume->number_of_dims, + | ~~~~~~^~~~~~~~~~~~~~~~ +/build/libminc-2.4.05/libsrc2/m2util.c:1627:52: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 1627 | r = miget_slice_range ( volume, pos, volume->number_of_dims, + | ~~~~~~^~~~~~~~~~~~~~~~ /build/libminc-2.4.05/libsrc2/hyper.c: In function 'mirw_hyperslab_normalized': /build/libminc-2.4.05/libsrc2/hyper.c:925:11: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 925 | ndims = volume->number_of_dims; | ^~~~~~ +/build/libminc-2.4.05/libsrc2/m2util.c: In function 'minc_update_thumbnail': +/build/libminc-2.4.05/libsrc2/m2util.c:1719:25: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 1719 | osize[i] = isize[i] / scale; + | ^ In file included from /build/libminc-2.4.05/libcommon/minc2_error.h:38, from /build/libminc-2.4.05/libsrc2/minc2.h:11, from /build/libminc-2.4.05/libsrc2/hyper.c:19: @@ -968,18 +966,38 @@ /build/libminc-2.4.05/libsrc2/hyper.c:943:43: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] 943 | miget_hyperslab_size_hdf(volume_type_id,ndims,hdf_count,&buffer_size); | ^~~~~ +/build/libminc-2.4.05/libsrc2/m2util.c:1779:20: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 1779 | in_bytes = scale * isize[1] * isize[2] * sizeof ( double ); + | ^ +/build/libminc-2.4.05/libsrc2/m2util.c:1785:14: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 1785 | count[0] = scale; + | ^~~~~ /build/libminc-2.4.05/libsrc2/hyper.c:944:43: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] 944 | miget_hyperslab_size_hdf(buffer_type_id,ndims,hdf_count,&input_buffer_size); | ^~~~~ +/build/libminc-2.4.05/libsrc2/m2util.c:1800:22: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 1800 | start[0] = slice * scale; + | ^ +/build/libminc-2.4.05/libsrc2/m2util.c:1803:16: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 1803 | count[0] = scale; + | ^~~~~ /build/libminc-2.4.05/libsrc2/hyper.c:983:21: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] 983 | slice_ndims = ndims; | ^~~~~ +/build/libminc-2.4.05/libsrc2/m2util.c: In function 'alloc1d': /build/libminc-2.4.05/libsrc2/hyper.c:994:14: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 994 | for (i = slice_ndims; i < ndims; i++ ) { | ^~~~~~~~~~~ -/build/libminc-2.4.05/libsrc2/hyper.c:1122:40: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] - 1122 | imap[volume->dim_indices[i]] = i; - | ^ +/build/libminc-2.4.05/libsrc2/m2util.c:1914:52: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + 1914 | return ( ( double * ) malloc ( sizeof ( double ) * n ) ); + | ^ +/build/libminc-2.4.05/libsrc2/m2util.c: In function 'alloc2d': +/build/libminc-2.4.05/libsrc2/m2util.c:1923:34: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + 1923 | mat = ( double ** ) malloc ( n * sizeof ( double * ) ); + | ^ +/build/libminc-2.4.05/libsrc2/m2util.c:1930:38: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + 1930 | mat[i] = ( double * ) malloc ( m * sizeof ( double ) ); + | ^ /build/libminc-2.4.05/libsrc2/grpattr.c: In function 'full_path_for_attr': /build/libminc-2.4.05/libsrc2/grpattr.c:41:24: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 41 | snprintf(fullpath, length, MI_ROOT_PATH "/image/%d", @@ -1021,6 +1039,9 @@ /build/libminc-2.4.05/libsrc2/grpattr.c:223:49: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 223 | strncpy ( path, data->frame_ptr->relpath, maxpath ); | ^~~~~~~ +/build/libminc-2.4.05/libsrc2/hyper.c:1122:40: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] + 1122 | imap[volume->dim_indices[i]] = i; + | ^ /build/libminc-2.4.05/libsrc2/grpattr.c: In function 'milist_grp_next': /build/libminc-2.4.05/libsrc2/grpattr.c:314:49: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 314 | strncpy ( path, data->frame_ptr->relpath, maxpath ); @@ -1028,6 +1049,8 @@ /build/libminc-2.4.05/libsrc2/grpattr.c:315:48: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 315 | strncpy ( data->frame_ptr->relpath, tmp, maxpath ); | ^~~~~~~ +[ 8%] Building C object CMakeFiles/minc2_static.dir/libsrc2/volume.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/libsrc2/volume.c.o -MF CMakeFiles/minc2_static.dir/libsrc2/volume.c.o.d -o CMakeFiles/minc2_static.dir/libsrc2/volume.c.o -c /build/libminc-2.4.05/libsrc2/volume.c /build/libminc-2.4.05/libsrc2/grpattr.c: In function 'miset_attr_values': /build/libminc-2.4.05/libsrc2/grpattr.c:906:31: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] 906 | slength = strlen ( path ) - ( pch - path ); @@ -1035,111 +1058,102 @@ /build/libminc-2.4.05/libsrc2/grpattr.c:910:41: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] 910 | std_name[i] = path[pch - path + 1 + i]; | ^ -/build/libminc-2.4.05/libsrc2/grpattr.c: In function 'full_path_for_attr': -/build/libminc-2.4.05/libsrc2/grpattr.c:41:24: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 41 | snprintf(fullpath, length, MI_ROOT_PATH "/image/%d", - | ^~~~~~ -/build/libminc-2.4.05/libsrc2/grpattr.c:48:46: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 48 | strncpy ( fullpath, MI_ROOT_PATH "/" , length ); - | ^~~~~~ -/build/libminc-2.4.05/libsrc2/grpattr.c:50:58: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 50 | strncpy ( fullpath, MI_ROOT_PATH "/" MI_INFO_NAME, length ); - | ^~~~~~ -/build/libminc-2.4.05/libsrc2/grpattr.c:55:35: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 55 | strncat(fullpath, "/", length - strlen(fullpath) - 1); - | ^ -/build/libminc-2.4.05/libsrc2/grpattr.c:58:35: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 58 | strncat(fullpath, path, length - strlen(fullpath) - 1); - | ^ -/build/libminc-2.4.05/libsrc2/grpattr.c: In function 'full_path_for_group': -/build/libminc-2.4.05/libsrc2/grpattr.c:64:52: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 64 | strncpy(fullpath, MI_ROOT_PATH "/" MI_INFO_NAME, length); - | ^~~~~~ -/build/libminc-2.4.05/libsrc2/grpattr.c:67:35: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 67 | strncat(fullpath, "/", length - strlen(fullpath) - 1); - | ^ -/build/libminc-2.4.05/libsrc2/grpattr.c:70:35: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 70 | strncat(fullpath, path, length - strlen(fullpath) - 1); - | ^ -/build/libminc-2.4.05/libsrc2/grpattr.c: In function 'milist_recursion': -/build/libminc-2.4.05/libsrc2/grpattr.c:124:22: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 124 | data->frame_ptr->grp_idx ); - | ~~~~~~~~~~~~~~~^~~~~~~~~ -/build/libminc-2.4.05/libsrc2/grpattr.c:157:58: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 157 | data->frame_ptr->grp_idx - 1, - | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~ -/build/libminc-2.4.05/libsrc2/grpattr.c: In function 'milist_attr_op': -/build/libminc-2.4.05/libsrc2/grpattr.c:198:44: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 198 | strncpy ( data->name_ptr, attr_name, data->name_len ); - | ~~~~^~~~~~~~~~ -/build/libminc-2.4.05/libsrc2/grpattr.c: In function 'milist_attr_next': -/build/libminc-2.4.05/libsrc2/grpattr.c:223:49: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 223 | strncpy ( path, data->frame_ptr->relpath, maxpath ); - | ^~~~~~~ -/build/libminc-2.4.05/libsrc2/grpattr.c: In function 'milist_grp_next': -/build/libminc-2.4.05/libsrc2/grpattr.c:314:49: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 314 | strncpy ( path, data->frame_ptr->relpath, maxpath ); - | ^~~~~~~ -/build/libminc-2.4.05/libsrc2/grpattr.c:315:48: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 315 | strncpy ( data->frame_ptr->relpath, tmp, maxpath ); - | ^~~~~~~ +/build/libminc-2.4.05/libsrc2/volprops.c: In function 'miget_volume_props': +/build/libminc-2.4.05/libsrc2/volprops.c:133:60: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + 133 | handle->edge_lengths = (int *)malloc(handle->edge_count*sizeof(int)); + | ^ +/build/libminc-2.4.05/libsrc2/volprops.c:139:33: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] + 139 | handle->edge_lengths[i] = dims[i]; + | ^~~~ +/build/libminc-2.4.05/libsrc2/volprops.c:151:43: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + 151 | fcode = H5Pget_filter1(hdf_plist, i, &flags, &cd_nelmts, + | ^ +/build/libminc-2.4.05/libsrc2/volprops.c:156:34: warning: conversion to 'int' from 'unsigned int' may change the sign of the result [-Wsign-conversion] + 156 | handle->zlib_level = cd_values[0]; + | ^~~~~~~~~ +/build/libminc-2.4.05/libsrc2/dimension.c: In function 'miget_volume_dimensions': +/build/libminc-2.4.05/libsrc2/dimension.c:417:20: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 417 | number_of_dims = volume->number_of_dims; + | ^~~~~~ +/build/libminc-2.4.05/libsrc2/dimension.c:422:16: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 422 | max_dims = array_length; + | ^~~~~~~~~~~~ +/build/libminc-2.4.05/libsrc2/volprops.c: In function 'miset_props_blocking': +/build/libminc-2.4.05/libsrc2/volprops.c:432:52: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + 432 | props->edge_lengths = (int *) malloc(edge_count*sizeof(int)); + | ^ +/build/libminc-2.4.05/libsrc2/dimension.c: In function 'miset_apparent_dimension_order': +/build/libminc-2.4.05/libsrc2/dimension.c:486:69: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + 486 | volume->dim_indices = ( int * ) malloc ( volume->number_of_dims * sizeof ( int ) ); + | ^ +/build/libminc-2.4.05/libsrc2/dimension.c: In function 'miset_apparent_dimension_order_by_name': +/build/libminc-2.4.05/libsrc2/dimension.c:580:69: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + 580 | volume->dim_indices = ( int * ) malloc ( volume->number_of_dims * sizeof ( int ) ); + | ^ +/build/libminc-2.4.05/libsrc2/dimension.c: In function 'miget_dimension_offsets': +/build/libminc-2.4.05/libsrc2/dimension.c:1036:43: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'double' may change value [-Wconversion] + 1036 | offsets[j] = dimension->start + ( i * dimension->step ); + | ^ +/build/libminc-2.4.05/libsrc2/dimension.c: In function 'miset_dimension_sampling_flag': +/build/libminc-2.4.05/libsrc2/dimension.c:1136:21: warning: unsigned conversion from 'int' to 'midimattr_t' {aka 'unsigned int'} changes value from '-2' to '4294967294' [-Wsign-conversion] + 1136 | dimension->attr &= ~MI_DIMATTR_REGULARLY_SAMPLED; + | ^~ +/build/libminc-2.4.05/libsrc2/dimension.c:1138:21: warning: unsigned conversion from 'int' to 'midimattr_t' {aka 'unsigned int'} changes value from '-3' to '4294967293' [-Wsign-conversion] + 1138 | dimension->attr &= ~MI_DIMATTR_NOT_REGULARLY_SAMPLED; + | ^~ /build/libminc-2.4.05/libsrc2/convert.c: In function 'miconvert_voxel_to_real': +/build/libminc-2.4.05/libsrc2/dimension.c: In function 'miget_dimension_start': /build/libminc-2.4.05/libsrc2/convert.c:115:39: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 115 | miget_slice_range(volume, coords, ncoords, &slice_max, &slice_min); | ^~~~~~~ +/build/libminc-2.4.05/libsrc2/dimension.c:1356:57: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'double' may change value [-Wconversion] + 1356 | *start_ptr = dimension->start + ( dimension->step * ( dimension->length - 1 ) ); + | ^ +/build/libminc-2.4.05/libsrc2/dimension.c:1362:61: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'double' may change value [-Wconversion] + 1362 | *start_ptr = dimension->start + ( dimension->step * ( dimension->length - 1 ) ); + | ^ /build/libminc-2.4.05/libsrc2/convert.c: In function 'miset_real_value': /build/libminc-2.4.05/libsrc2/convert.c:264:45: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 264 | miconvert_real_to_voxel(volume, coords, ndims, value, &voxel); | ^~~~~ +/build/libminc-2.4.05/libsrc2/dimension.c:1369:63: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'double' may change value [-Wconversion] + 1369 | *start_ptr = dimension->start + ( dimension->step * ( dimension->length - 1 ) ); + | ^ +/build/libminc-2.4.05/libsrc2/slice.c: In function 'mirw_slice_minmax': +/build/libminc-2.4.05/libsrc2/slice.c:72:11: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 72 | ndims = H5Sget_simple_extent_ndims ( fspc_id ); + | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/libminc-2.4.05/libsrc2/convert.c: In function 'miget_volume_real_range': -/build/libminc-2.4.05/libsrc2/dimension.c: In function 'miget_volume_dimensions': /build/libminc-2.4.05/libsrc2/convert.c:536:23: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 536 | buffer = malloc(n * sizeof(double)); | ^ +/build/libminc-2.4.05/libsrc2/convert.c:562:23: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + 562 | buffer = malloc(n * sizeof(double)); + | ^ +[ 8%] Building C object CMakeFiles/minc2.dir/libsrc2/grpattr.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/libsrc2/grpattr.c.o -MF CMakeFiles/minc2.dir/libsrc2/grpattr.c.o.d -o CMakeFiles/minc2.dir/libsrc2/grpattr.c.o -c /build/libminc-2.4.05/libsrc2/grpattr.c +[ 8%] Building C object CMakeFiles/minc2_static.dir/libcommon/minc2_error.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/libcommon/minc2_error.c.o -MF CMakeFiles/minc2_static.dir/libcommon/minc2_error.c.o.d -o CMakeFiles/minc2_static.dir/libcommon/minc2_error.c.o -c /build/libminc-2.4.05/libcommon/minc2_error.c +/build/libminc-2.4.05/libsrc2/dimension.c: In function 'miget_volume_dimensions': /build/libminc-2.4.05/libsrc2/dimension.c:417:20: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 417 | number_of_dims = volume->number_of_dims; | ^~~~~~ -/build/libminc-2.4.05/libsrc2/grpattr.c: In function 'miset_attr_values': /build/libminc-2.4.05/libsrc2/dimension.c:422:16: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 422 | max_dims = array_length; | ^~~~~~~~~~~~ -/build/libminc-2.4.05/libsrc2/record.c: In function 'miget_record_field_name': -/build/libminc-2.4.05/libsrc2/record.c:57:50: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - 57 | *name = H5Tget_member_name(volume->ftype_id, index); - | ^~~~~ -/build/libminc-2.4.05/libsrc2/convert.c:562:23: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - 562 | buffer = malloc(n * sizeof(double)); - | ^ -/build/libminc-2.4.05/libsrc2/grpattr.c:906:31: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] - 906 | slength = strlen ( path ) - ( pch - path ); - | ^ -/build/libminc-2.4.05/libsrc2/record.c: In function 'miset_record_field_name': -/build/libminc-2.4.05/libsrc2/record.c:91:20: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 91 | offset = index * H5Tget_size(ftype_id); - | ^ /build/libminc-2.4.05/libsrc2/dimension.c: In function 'miset_apparent_dimension_order': /build/libminc-2.4.05/libsrc2/dimension.c:486:69: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 486 | volume->dim_indices = ( int * ) malloc ( volume->number_of_dims * sizeof ( int ) ); | ^ -/build/libminc-2.4.05/libsrc2/grpattr.c:910:41: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] - 910 | std_name[i] = path[pch - path + 1 + i]; - | ^ /build/libminc-2.4.05/libsrc2/dimension.c: In function 'miset_apparent_dimension_order_by_name': /build/libminc-2.4.05/libsrc2/dimension.c:580:69: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 580 | volume->dim_indices = ( int * ) malloc ( volume->number_of_dims * sizeof ( int ) ); | ^ -/build/libminc-2.4.05/libsrc2/label.c: In function 'miswap4': -/build/libminc-2.4.05/libsrc2/label.c:40:12: warning: conversion to 'int' from 'unsigned int' may change the sign of the result [-Wsign-conversion] - 40 | return (tmp); - | ^ +[ 9%] Building C object CMakeFiles/minc2_static.dir/libcommon/minc_config.c.o /build/libminc-2.4.05/libsrc2/dimension.c: In function 'miget_dimension_offsets': /build/libminc-2.4.05/libsrc2/dimension.c:1036:43: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'double' may change value [-Wconversion] 1036 | offsets[j] = dimension->start + ( i * dimension->step ); | ^ -/build/libminc-2.4.05/libsrc2/label.c: In function 'miget_label_value_by_index': -/build/libminc-2.4.05/libsrc2/label.c:199:51: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - 199 | result = H5Tget_member_value(volume->mtype_id,idx,value); - | ^~~ /build/libminc-2.4.05/libsrc2/dimension.c: In function 'miset_dimension_sampling_flag': /build/libminc-2.4.05/libsrc2/dimension.c:1136:21: warning: unsigned conversion from 'int' to 'midimattr_t' {aka 'unsigned int'} changes value from '-2' to '4294967294' [-Wsign-conversion] 1136 | dimension->attr &= ~MI_DIMATTR_REGULARLY_SAMPLED; @@ -1147,6 +1161,7 @@ /build/libminc-2.4.05/libsrc2/dimension.c:1138:21: warning: unsigned conversion from 'int' to 'midimattr_t' {aka 'unsigned int'} changes value from '-3' to '4294967293' [-Wsign-conversion] 1138 | dimension->attr &= ~MI_DIMATTR_NOT_REGULARLY_SAMPLED; | ^~ +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/libcommon/minc_config.c.o -MF CMakeFiles/minc2_static.dir/libcommon/minc_config.c.o.d -o CMakeFiles/minc2_static.dir/libcommon/minc_config.c.o -c /build/libminc-2.4.05/libcommon/minc_config.c /build/libminc-2.4.05/libsrc2/dimension.c: In function 'miget_dimension_start': /build/libminc-2.4.05/libsrc2/dimension.c:1356:57: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'double' may change value [-Wconversion] 1356 | *start_ptr = dimension->start + ( dimension->step * ( dimension->length - 1 ) ); @@ -1157,167 +1172,6 @@ /build/libminc-2.4.05/libsrc2/dimension.c:1369:63: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'double' may change value [-Wconversion] 1369 | *start_ptr = dimension->start + ( dimension->step * ( dimension->length - 1 ) ); | ^ -[ 7%] Building C object CMakeFiles/minc2.dir/libsrc2/label.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/libsrc2/label.c.o -MF CMakeFiles/minc2.dir/libsrc2/label.c.o.d -o CMakeFiles/minc2.dir/libsrc2/label.c.o -c /build/libminc-2.4.05/libsrc2/label.c -[ 8%] Building C object CMakeFiles/minc2_static.dir/libsrc2/slice.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/libsrc2/slice.c.o -MF CMakeFiles/minc2_static.dir/libsrc2/slice.c.o.d -o CMakeFiles/minc2_static.dir/libsrc2/slice.c.o -c /build/libminc-2.4.05/libsrc2/slice.c -[ 8%] Building C object CMakeFiles/minc2.dir/libsrc2/record.c.o -[ 9%] Building C object CMakeFiles/minc2.dir/libsrc2/m2util.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/libsrc2/record.c.o -MF CMakeFiles/minc2.dir/libsrc2/record.c.o.d -o CMakeFiles/minc2.dir/libsrc2/record.c.o -c /build/libminc-2.4.05/libsrc2/record.c -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/libsrc2/m2util.c.o -MF CMakeFiles/minc2.dir/libsrc2/m2util.c.o.d -o CMakeFiles/minc2.dir/libsrc2/m2util.c.o -c /build/libminc-2.4.05/libsrc2/m2util.c -/build/libminc-2.4.05/libsrc2/m2util.c: In function 'midownsample_slice': -/build/libminc-2.4.05/libsrc2/m2util.c:1491:18: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 1491 | x1 = x; - | ^ -/build/libminc-2.4.05/libsrc2/m2util.c:1492:26: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 1492 | y1 = y + ( j * scale ); - | ^ -/build/libminc-2.4.05/libsrc2/m2util.c:1492:20: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 1492 | y1 = y + ( j * scale ); - | ^ -/build/libminc-2.4.05/libsrc2/m2util.c:1493:26: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 1493 | z1 = z + ( k * scale ); - | ^ -/build/libminc-2.4.05/libsrc2/m2util.c:1493:20: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 1493 | z1 = z + ( k * scale ); - | ^ -/build/libminc-2.4.05/libsrc2/m2util.c: In function 'miconvert_hyperslab_to_real': -/build/libminc-2.4.05/libsrc2/m2util.c:1602:46: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 1602 | r = miget_slice_range ( volume, pos, volume->number_of_dims, - | ~~~~~~^~~~~~~~~~~~~~~~ -/build/libminc-2.4.05/libsrc2/m2util.c:1627:52: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 1627 | r = miget_slice_range ( volume, pos, volume->number_of_dims, - | ~~~~~~^~~~~~~~~~~~~~~~ -/build/libminc-2.4.05/libsrc2/m2util.c: In function 'minc_update_thumbnail': -/build/libminc-2.4.05/libsrc2/m2util.c:1719:25: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 1719 | osize[i] = isize[i] / scale; - | ^ -/build/libminc-2.4.05/libsrc2/m2util.c:1779:20: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 1779 | in_bytes = scale * isize[1] * isize[2] * sizeof ( double ); - | ^ -/build/libminc-2.4.05/libsrc2/m2util.c:1785:14: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 1785 | count[0] = scale; - | ^~~~~ -/build/libminc-2.4.05/libsrc2/m2util.c:1800:22: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 1800 | start[0] = slice * scale; - | ^ -/build/libminc-2.4.05/libsrc2/m2util.c:1803:16: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 1803 | count[0] = scale; - | ^~~~~ -/build/libminc-2.4.05/libsrc2/m2util.c: In function 'alloc1d': -/build/libminc-2.4.05/libsrc2/m2util.c:1914:52: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - 1914 | return ( ( double * ) malloc ( sizeof ( double ) * n ) ); - | ^ -/build/libminc-2.4.05/libsrc2/m2util.c: In function 'alloc2d': -/build/libminc-2.4.05/libsrc2/m2util.c:1923:34: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - 1923 | mat = ( double ** ) malloc ( n * sizeof ( double * ) ); - | ^ -/build/libminc-2.4.05/libsrc2/m2util.c:1930:38: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - 1930 | mat[i] = ( double * ) malloc ( m * sizeof ( double ) ); - | ^ -/build/libminc-2.4.05/libsrc2/slice.c: In function 'mirw_slice_minmax': -/build/libminc-2.4.05/libsrc2/slice.c:72:11: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 72 | ndims = H5Sget_simple_extent_ndims ( fspc_id ); - | ^~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/libminc-2.4.05/libsrc2/label.c: In function 'miswap4': -/build/libminc-2.4.05/libsrc2/label.c:40:12: warning: conversion to 'int' from 'unsigned int' may change the sign of the result [-Wsign-conversion] - 40 | return (tmp); - | ^ -[ 9%] Building C object CMakeFiles/minc2_static.dir/libsrc2/valid.c.o -/build/libminc-2.4.05/libsrc2/label.c: In function 'miget_label_value_by_index': -/build/libminc-2.4.05/libsrc2/label.c:199:51: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - 199 | result = H5Tget_member_value(volume->mtype_id,idx,value); - | ^~~ -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/libsrc2/valid.c.o -MF CMakeFiles/minc2_static.dir/libsrc2/valid.c.o.d -o CMakeFiles/minc2_static.dir/libsrc2/valid.c.o -c /build/libminc-2.4.05/libsrc2/valid.c -/build/libminc-2.4.05/libsrc2/record.c: In function 'miget_record_field_name': -/build/libminc-2.4.05/libsrc2/record.c:57:50: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - 57 | *name = H5Tget_member_name(volume->ftype_id, index); - | ^~~~~ -/build/libminc-2.4.05/libsrc2/record.c: In function 'miset_record_field_name': -/build/libminc-2.4.05/libsrc2/record.c:91:20: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 91 | offset = index * H5Tget_size(ftype_id); - | ^ -[ 10%] Building C object CMakeFiles/minc2_static.dir/libsrc2/volprops.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/libsrc2/volprops.c.o -MF CMakeFiles/minc2_static.dir/libsrc2/volprops.c.o.d -o CMakeFiles/minc2_static.dir/libsrc2/volprops.c.o -c /build/libminc-2.4.05/libsrc2/volprops.c -/build/libminc-2.4.05/libsrc2/m2util.c: In function 'midownsample_slice': -/build/libminc-2.4.05/libsrc2/m2util.c:1491:18: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 1491 | x1 = x; - | ^ -/build/libminc-2.4.05/libsrc2/m2util.c:1492:26: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 1492 | y1 = y + ( j * scale ); - | ^ -/build/libminc-2.4.05/libsrc2/m2util.c:1492:20: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 1492 | y1 = y + ( j * scale ); - | ^ -/build/libminc-2.4.05/libsrc2/m2util.c:1493:26: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 1493 | z1 = z + ( k * scale ); - | ^ -/build/libminc-2.4.05/libsrc2/m2util.c:1493:20: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 1493 | z1 = z + ( k * scale ); - | ^ -/build/libminc-2.4.05/libsrc2/m2util.c: In function 'miconvert_hyperslab_to_real': -/build/libminc-2.4.05/libsrc2/m2util.c:1602:46: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 1602 | r = miget_slice_range ( volume, pos, volume->number_of_dims, - | ~~~~~~^~~~~~~~~~~~~~~~ -/build/libminc-2.4.05/libsrc2/m2util.c:1627:52: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 1627 | r = miget_slice_range ( volume, pos, volume->number_of_dims, - | ~~~~~~^~~~~~~~~~~~~~~~ -/build/libminc-2.4.05/libsrc2/m2util.c: In function 'minc_update_thumbnail': -/build/libminc-2.4.05/libsrc2/m2util.c:1719:25: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 1719 | osize[i] = isize[i] / scale; - | ^ -/build/libminc-2.4.05/libsrc2/m2util.c:1779:20: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 1779 | in_bytes = scale * isize[1] * isize[2] * sizeof ( double ); - | ^ -/build/libminc-2.4.05/libsrc2/m2util.c:1785:14: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 1785 | count[0] = scale; - | ^~~~~ -/build/libminc-2.4.05/libsrc2/m2util.c:1800:22: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 1800 | start[0] = slice * scale; - | ^ -/build/libminc-2.4.05/libsrc2/m2util.c:1803:16: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 1803 | count[0] = scale; - | ^~~~~ -/build/libminc-2.4.05/libsrc2/m2util.c: In function 'alloc1d': -/build/libminc-2.4.05/libsrc2/m2util.c:1914:52: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - 1914 | return ( ( double * ) malloc ( sizeof ( double ) * n ) ); - | ^ -/build/libminc-2.4.05/libsrc2/m2util.c: In function 'alloc2d': -/build/libminc-2.4.05/libsrc2/m2util.c:1923:34: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - 1923 | mat = ( double ** ) malloc ( n * sizeof ( double * ) ); - | ^ -/build/libminc-2.4.05/libsrc2/m2util.c:1930:38: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - 1930 | mat[i] = ( double * ) malloc ( m * sizeof ( double ) ); - | ^ -[ 10%] Building C object CMakeFiles/minc2_static.dir/libsrc2/volume.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/libsrc2/volume.c.o -MF CMakeFiles/minc2_static.dir/libsrc2/volume.c.o.d -o CMakeFiles/minc2_static.dir/libsrc2/volume.c.o -c /build/libminc-2.4.05/libsrc2/volume.c -[ 10%] Building C object CMakeFiles/minc2.dir/libsrc2/slice.c.o -[ 10%] Building C object CMakeFiles/minc2_static.dir/libcommon/minc2_error.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/libsrc2/slice.c.o -MF CMakeFiles/minc2.dir/libsrc2/slice.c.o.d -o CMakeFiles/minc2.dir/libsrc2/slice.c.o -c /build/libminc-2.4.05/libsrc2/slice.c -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/libcommon/minc2_error.c.o -MF CMakeFiles/minc2_static.dir/libcommon/minc2_error.c.o.d -o CMakeFiles/minc2_static.dir/libcommon/minc2_error.c.o -c /build/libminc-2.4.05/libcommon/minc2_error.c -/build/libminc-2.4.05/libsrc2/volprops.c: In function 'miget_volume_props': -/build/libminc-2.4.05/libsrc2/volprops.c:133:60: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - 133 | handle->edge_lengths = (int *)malloc(handle->edge_count*sizeof(int)); - | ^ -/build/libminc-2.4.05/libsrc2/volprops.c:139:33: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] - 139 | handle->edge_lengths[i] = dims[i]; - | ^~~~ -/build/libminc-2.4.05/libsrc2/volprops.c:151:43: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - 151 | fcode = H5Pget_filter1(hdf_plist, i, &flags, &cd_nelmts, - | ^ -/build/libminc-2.4.05/libsrc2/volprops.c:156:34: warning: conversion to 'int' from 'unsigned int' may change the sign of the result [-Wsign-conversion] - 156 | handle->zlib_level = cd_values[0]; - | ^~~~~~~~~ -/build/libminc-2.4.05/libsrc2/volprops.c: In function 'miset_props_blocking': -/build/libminc-2.4.05/libsrc2/volprops.c:432:52: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - 432 | props->edge_lengths = (int *) malloc(edge_count*sizeof(int)); - | ^ -[ 11%] Building C object CMakeFiles/minc2.dir/libsrc2/valid.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/libsrc2/valid.c.o -MF CMakeFiles/minc2.dir/libsrc2/valid.c.o.d -o CMakeFiles/minc2.dir/libsrc2/valid.c.o -c /build/libminc-2.4.05/libsrc2/valid.c -[ 12%] Building C object CMakeFiles/minc2_static.dir/libcommon/minc_config.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/libcommon/minc_config.c.o -MF CMakeFiles/minc2_static.dir/libcommon/minc_config.c.o.d -o CMakeFiles/minc2_static.dir/libcommon/minc_config.c.o -c /build/libminc-2.4.05/libcommon/minc_config.c -[ 12%] Building C object CMakeFiles/minc2_static.dir/libcommon/minc_error.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/libcommon/minc_error.c.o -MF CMakeFiles/minc2_static.dir/libcommon/minc_error.c.o.d -o CMakeFiles/minc2_static.dir/libcommon/minc_error.c.o -c /build/libminc-2.4.05/libcommon/minc_error.c /build/libminc-2.4.05/libsrc2/volume.c: In function '_hdf_open': /build/libminc-2.4.05/libsrc2/volume.c:124:117: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 124 | H5Pset_cache(prp_id, 0, 2503, miget_cfg_present(MICFG_MINC_FILE_CACHE)?miget_cfg_int(MICFG_MINC_FILE_CACHE)*100000:_MI1_MAX_VAR_BUFFER_SIZE*10, 1.0); @@ -1357,7 +1211,6 @@ /build/libminc-2.4.05/libsrc2/volume.c:992:73: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 992 | props_handle->edge_lengths = (int *)malloc(create_props->max_lengths*sizeof(int)); | ^ -[ 12%] Building C object CMakeFiles/minc2.dir/libsrc2/volprops.c.o /build/libminc-2.4.05/libsrc2/volume.c: In function '_miget_irregular_spacing': /build/libminc-2.4.05/libsrc2/volume.c:1175:35: warning: conversion to 'long long unsigned int' from 'hssize_t' {aka 'long long int'} may change the sign of the result [-Wsign-conversion] 1175 | hdim->offsets = malloc(n_points * sizeof(double)); @@ -1377,7 +1230,6 @@ /build/libminc-2.4.05/libcommon/minc_error.h:187:75: note: in definition of macro 'MI_LOG_ERROR' 187 | #define MI_LOG_ERROR(code,...) mi2log_message(__FILE__, __LINE__, code, ##__VA_ARGS__ ) | ^~~~~~~~~~~ -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/libsrc2/volprops.c.o -MF CMakeFiles/minc2.dir/libsrc2/volprops.c.o.d -o CMakeFiles/minc2.dir/libsrc2/volprops.c.o -c /build/libminc-2.4.05/libsrc2/volprops.c /build/libminc-2.4.05/libsrc2/volume.c: In function 'miopen_volume': /build/libminc-2.4.05/libsrc2/volume.c:1425:62: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 1425 | handle->dim_handles = (midimhandle_t *)malloc(n_dimensions * @@ -1397,44 +1249,74 @@ /build/libminc-2.4.05/libsrc2/volume.c:1515:59: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 1515 | char *tmp_nm = H5Tget_member_name(handle->ftype_id, i); | ^ +[ 10%] Building C object CMakeFiles/minc2_static.dir/libcommon/ParseArgv.c.o +[ 10%] Building C object CMakeFiles/minc2_static.dir/libcommon/minc_error.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/libcommon/minc_error.c.o -MF CMakeFiles/minc2_static.dir/libcommon/minc_error.c.o.d -o CMakeFiles/minc2_static.dir/libcommon/minc_error.c.o -c /build/libminc-2.4.05/libcommon/minc_error.c +/build/libminc-2.4.05/libsrc2/grpattr.c: In function 'full_path_for_attr': +/build/libminc-2.4.05/libsrc2/grpattr.c:41:24: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 41 | snprintf(fullpath, length, MI_ROOT_PATH "/image/%d", + | ^~~~~~ +/build/libminc-2.4.05/libsrc2/grpattr.c:48:46: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 48 | strncpy ( fullpath, MI_ROOT_PATH "/" , length ); + | ^~~~~~ +/build/libminc-2.4.05/libsrc2/grpattr.c:50:58: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 50 | strncpy ( fullpath, MI_ROOT_PATH "/" MI_INFO_NAME, length ); + | ^~~~~~ +/build/libminc-2.4.05/libsrc2/grpattr.c:55:35: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 55 | strncat(fullpath, "/", length - strlen(fullpath) - 1); + | ^ +/build/libminc-2.4.05/libsrc2/grpattr.c:58:35: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 58 | strncat(fullpath, path, length - strlen(fullpath) - 1); + | ^ +/build/libminc-2.4.05/libsrc2/grpattr.c: In function 'full_path_for_group': +/build/libminc-2.4.05/libsrc2/grpattr.c:64:52: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 64 | strncpy(fullpath, MI_ROOT_PATH "/" MI_INFO_NAME, length); + | ^~~~~~ +/build/libminc-2.4.05/libsrc2/grpattr.c:67:35: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 67 | strncat(fullpath, "/", length - strlen(fullpath) - 1); + | ^ +/build/libminc-2.4.05/libsrc2/grpattr.c:70:35: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 70 | strncat(fullpath, path, length - strlen(fullpath) - 1); + | ^ +/build/libminc-2.4.05/libsrc2/grpattr.c: In function 'milist_recursion': +/build/libminc-2.4.05/libsrc2/grpattr.c:124:22: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 124 | data->frame_ptr->grp_idx ); + | ~~~~~~~~~~~~~~~^~~~~~~~~ +/build/libminc-2.4.05/libsrc2/grpattr.c:157:58: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 157 | data->frame_ptr->grp_idx - 1, + | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~ +/build/libminc-2.4.05/libsrc2/grpattr.c: In function 'milist_attr_op': +/build/libminc-2.4.05/libsrc2/grpattr.c:198:44: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 198 | strncpy ( data->name_ptr, attr_name, data->name_len ); + | ~~~~^~~~~~~~~~ +/build/libminc-2.4.05/libsrc2/grpattr.c: In function 'milist_attr_next': +/build/libminc-2.4.05/libsrc2/grpattr.c:223:49: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 223 | strncpy ( path, data->frame_ptr->relpath, maxpath ); + | ^~~~~~~ +/build/libminc-2.4.05/libsrc2/grpattr.c: In function 'milist_grp_next': +/build/libminc-2.4.05/libsrc2/grpattr.c:314:49: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 314 | strncpy ( path, data->frame_ptr->relpath, maxpath ); + | ^~~~~~~ +/build/libminc-2.4.05/libsrc2/grpattr.c:315:48: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 315 | strncpy ( data->frame_ptr->relpath, tmp, maxpath ); + | ^~~~~~~ +/build/libminc-2.4.05/libsrc2/grpattr.c: In function 'miset_attr_values': +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/libcommon/ParseArgv.c.o -MF CMakeFiles/minc2_static.dir/libcommon/ParseArgv.c.o.d -o CMakeFiles/minc2_static.dir/libcommon/ParseArgv.c.o -c /build/libminc-2.4.05/libcommon/ParseArgv.c +/build/libminc-2.4.05/libsrc2/grpattr.c:906:31: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] + 906 | slength = strlen ( path ) - ( pch - path ); + | ^ +/build/libminc-2.4.05/libsrc2/grpattr.c:910:41: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] + 910 | std_name[i] = path[pch - path + 1 + i]; + | ^ +[ 10%] Building C object CMakeFiles/minc2_static.dir/libcommon/read_file_names.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/libcommon/read_file_names.c.o -MF CMakeFiles/minc2_static.dir/libcommon/read_file_names.c.o.d -o CMakeFiles/minc2_static.dir/libcommon/read_file_names.c.o -c /build/libminc-2.4.05/libcommon/read_file_names.c +[ 11%] Building C object CMakeFiles/minc2.dir/libsrc2/hyper.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/libsrc2/hyper.c.o -MF CMakeFiles/minc2.dir/libsrc2/hyper.c.o.d -o CMakeFiles/minc2.dir/libsrc2/hyper.c.o -c /build/libminc-2.4.05/libsrc2/hyper.c /build/libminc-2.4.05/libcommon/minc_config.c: In function 'miread_cfg': /build/libminc-2.4.05/libcommon/minc_config.c:87:42: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 87 | strncpy(buffer, tmp, maxlen); | ^~~~~~ -/build/libminc-2.4.05/libsrc2/slice.c: In function 'mirw_slice_minmax': -/build/libminc-2.4.05/libsrc2/slice.c:72:11: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 72 | ndims = H5Sget_simple_extent_ndims ( fspc_id ); - | ^~~~~~~~~~~~~~~~~~~~~~~~~~ -[ 13%] Building C object CMakeFiles/minc2.dir/libsrc2/volume.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/libsrc2/volume.c.o -MF CMakeFiles/minc2.dir/libsrc2/volume.c.o.d -o CMakeFiles/minc2.dir/libsrc2/volume.c.o -c /build/libminc-2.4.05/libsrc2/volume.c -/build/libminc-2.4.05/libsrc2/volprops.c: In function 'miget_volume_props': -/build/libminc-2.4.05/libsrc2/volprops.c:133:60: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - 133 | handle->edge_lengths = (int *)malloc(handle->edge_count*sizeof(int)); - | ^ -/build/libminc-2.4.05/libsrc2/volprops.c:139:33: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] - 139 | handle->edge_lengths[i] = dims[i]; - | ^~~~ -/build/libminc-2.4.05/libsrc2/volprops.c:151:43: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - 151 | fcode = H5Pget_filter1(hdf_plist, i, &flags, &cd_nelmts, - | ^ -/build/libminc-2.4.05/libsrc2/volprops.c:156:34: warning: conversion to 'int' from 'unsigned int' may change the sign of the result [-Wsign-conversion] - 156 | handle->zlib_level = cd_values[0]; - | ^~~~~~~~~ -/build/libminc-2.4.05/libsrc2/volprops.c: In function 'miset_props_blocking': -/build/libminc-2.4.05/libsrc2/volprops.c:432:52: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - 432 | props->edge_lengths = (int *) malloc(edge_count*sizeof(int)); - | ^ -[ 14%] Building C object CMakeFiles/minc2_static.dir/libcommon/ParseArgv.c.o -[ 14%] Building C object CMakeFiles/minc2_static.dir/libcommon/read_file_names.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/libcommon/ParseArgv.c.o -MF CMakeFiles/minc2_static.dir/libcommon/ParseArgv.c.o.d -o CMakeFiles/minc2_static.dir/libcommon/ParseArgv.c.o -c /build/libminc-2.4.05/libcommon/ParseArgv.c -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/libcommon/read_file_names.c.o -MF CMakeFiles/minc2_static.dir/libcommon/read_file_names.c.o.d -o CMakeFiles/minc2_static.dir/libcommon/read_file_names.c.o -c /build/libminc-2.4.05/libcommon/read_file_names.c -[ 14%] Building C object CMakeFiles/minc2.dir/libcommon/minc2_error.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/libcommon/minc2_error.c.o -MF CMakeFiles/minc2.dir/libcommon/minc2_error.c.o.d -o CMakeFiles/minc2.dir/libcommon/minc2_error.c.o -c /build/libminc-2.4.05/libcommon/minc2_error.c -[ 15%] Building C object CMakeFiles/minc2.dir/libcommon/minc_config.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/libcommon/minc_config.c.o -MF CMakeFiles/minc2.dir/libcommon/minc_config.c.o.d -o CMakeFiles/minc2.dir/libcommon/minc_config.c.o -c /build/libminc-2.4.05/libcommon/minc_config.c -[ 15%] Building C object CMakeFiles/minc2.dir/libcommon/minc_error.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/libcommon/minc_error.c.o -MF CMakeFiles/minc2.dir/libcommon/minc_error.c.o.d -o CMakeFiles/minc2.dir/libcommon/minc_error.c.o -c /build/libminc-2.4.05/libcommon/minc_error.c -[ 16%] Building C object CMakeFiles/minc2_static.dir/libcommon/restructure.c.o +[ 12%] Building C object CMakeFiles/minc2_static.dir/libcommon/restructure.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/libcommon/restructure.c.o -MF CMakeFiles/minc2_static.dir/libcommon/restructure.c.o.d -o CMakeFiles/minc2_static.dir/libcommon/restructure.c.o -c /build/libminc-2.4.05/libcommon/restructure.c /build/libminc-2.4.05/libcommon/read_file_names.c: In function 'read_file_names': /build/libminc-2.4.05/libcommon/read_file_names.c:53:34: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] @@ -1443,131 +1325,19 @@ /build/libminc-2.4.05/libcommon/read_file_names.c:76:48: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 76 | files = realloc(files, sizeof(*files) * array_size); | ^ -[ 17%] Building C object CMakeFiles/minc2.dir/libcommon/ParseArgv.c.o -/build/libminc-2.4.05/libsrc2/volume.c: In function '_hdf_open': -/build/libminc-2.4.05/libsrc2/volume.c:124:117: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 124 | H5Pset_cache(prp_id, 0, 2503, miget_cfg_present(MICFG_MINC_FILE_CACHE)?miget_cfg_int(MICFG_MINC_FILE_CACHE)*100000:_MI1_MAX_VAR_BUFFER_SIZE*10, 1.0); - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/libminc-2.4.05/libsrc2/volume.c:136:24: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - 136 | fd = H5Fopen(path, mode, prp_id); - | ^~~~ -/build/libminc-2.4.05/libsrc2/volume.c: In function '_hdf_create': -/build/libminc-2.4.05/libsrc2/volume.c:228:115: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 228 | H5Pset_cache(fpid, 0, 2503, miget_cfg_present(MICFG_MINC_FILE_CACHE)?miget_cfg_int(MICFG_MINC_FILE_CACHE)*100000:_MI1_MAX_VAR_BUFFER_SIZE*100, 1.0); - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/libminc-2.4.05/libsrc2/volume.c:231:26: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - 231 | fd = H5Fcreate(path, cmode, H5P_DEFAULT, fpid); - | ^~~~~ -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/libcommon/ParseArgv.c.o -MF CMakeFiles/minc2.dir/libcommon/ParseArgv.c.o.d -o CMakeFiles/minc2.dir/libcommon/ParseArgv.c.o -c /build/libminc-2.4.05/libcommon/ParseArgv.c -/build/libminc-2.4.05/libsrc2/volume.c: In function 'micreate_volume': -/build/libminc-2.4.05/libsrc2/volume.c:638:23: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 638 | hdf_size[i] = create_props->edge_lengths[i]; - | ^~~~~~~~~~~~ -In file included from /build/libminc-2.4.05/libcommon/minc2_error.h:38, - from /build/libminc-2.4.05/libsrc2/minc2.h:11, - from /build/libminc-2.4.05/libsrc2/volume.c:32: -/build/libminc-2.4.05/libsrc2/volume.c:668:72: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - 668 | MI_CHECK_HDF_CALL_RET(stat = H5Pset_deflate(hdf_plist, create_props->zlib_level),"H5Pset_deflate") - | ~~~~~~~~~~~~^~~~~~~~~~~~ -/build/libminc-2.4.05/libcommon/minc_error.h:189:46: note: in definition of macro 'MI_CHECK_HDF_CALL_RET' - 189 | #define MI_CHECK_HDF_CALL_RET(var,call) {if((var)<0) return MI_LOG_ERROR(MI2_MSG_HDF5,call);} - | ^~~ -/build/libminc-2.4.05/libsrc2/volume.c:900:70: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - 900 | handle->dim_handles = (midimhandle_t *)malloc(number_of_dimensions * - | ^ -/build/libminc-2.4.05/libsrc2/volume.c:904:63: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - 904 | return MI_LOG_ERROR(MI2_MSG_OUTOFMEM,number_of_dimensions * sizeof(midimhandle_t)); - | ^ -/build/libminc-2.4.05/libcommon/minc_error.h:187:75: note: in definition of macro 'MI_LOG_ERROR' - 187 | #define MI_LOG_ERROR(code,...) mi2log_message(__FILE__, __LINE__, code, ##__VA_ARGS__ ) - | ^~~~~~~~~~~ -/build/libminc-2.4.05/libsrc2/volume.c:992:73: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - 992 | props_handle->edge_lengths = (int *)malloc(create_props->max_lengths*sizeof(int)); - | ^ -/build/libminc-2.4.05/libcommon/minc_config.c: In function 'miread_cfg': -/build/libminc-2.4.05/libcommon/minc_config.c:87:42: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 87 | strncpy(buffer, tmp, maxlen); - | ^~~~~~ -/build/libminc-2.4.05/libsrc2/volume.c: In function '_miget_irregular_spacing': -/build/libminc-2.4.05/libsrc2/volume.c:1175:35: warning: conversion to 'long long unsigned int' from 'hssize_t' {aka 'long long int'} may change the sign of the result [-Wsign-conversion] - 1175 | hdim->offsets = malloc(n_points * sizeof(double)); - | ^ -/build/libminc-2.4.05/libsrc2/volume.c:1177:52: warning: conversion to 'long long unsigned int' from 'hssize_t' {aka 'long long int'} may change the sign of the result [-Wsign-conversion] - 1177 | return MI_LOG_ERROR(MI2_MSG_OUTOFMEM, n_points * sizeof(double)); - | ^ -/build/libminc-2.4.05/libcommon/minc_error.h:187:75: note: in definition of macro 'MI_LOG_ERROR' - 187 | #define MI_LOG_ERROR(code,...) mi2log_message(__FILE__, __LINE__, code, ##__VA_ARGS__ ) - | ^~~~~~~~~~~ -/build/libminc-2.4.05/libsrc2/volume.c:1199:34: warning: conversion to 'long long unsigned int' from 'hssize_t' {aka 'long long int'} may change the sign of the result [-Wsign-conversion] - 1199 | hdim->widths = malloc(n_points * sizeof(double)); - | ^ -/build/libminc-2.4.05/libsrc2/volume.c:1201:52: warning: conversion to 'long long unsigned int' from 'hssize_t' {aka 'long long int'} may change the sign of the result [-Wsign-conversion] - 1201 | return MI_LOG_ERROR(MI2_MSG_OUTOFMEM, n_points * sizeof(double)); - | ^ -/build/libminc-2.4.05/libcommon/minc_error.h:187:75: note: in definition of macro 'MI_LOG_ERROR' - 187 | #define MI_LOG_ERROR(code,...) mi2log_message(__FILE__, __LINE__, code, ##__VA_ARGS__ ) - | ^~~~~~~~~~~ -/build/libminc-2.4.05/libsrc2/volume.c: In function 'miopen_volume': -/build/libminc-2.4.05/libsrc2/volume.c:1425:62: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - 1425 | handle->dim_handles = (midimhandle_t *)malloc(n_dimensions * - | ^ -/build/libminc-2.4.05/libsrc2/volume.c:1430:56: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - 1430 | return MI_LOG_ERROR(MI2_MSG_OUTOFMEM, n_dimensions * sizeof(midimhandle_t)); - | ^ -/build/libminc-2.4.05/libcommon/minc_error.h:187:75: note: in definition of macro 'MI_LOG_ERROR' - 187 | #define MI_LOG_ERROR(code,...) mi2log_message(__FILE__, __LINE__, code, ##__VA_ARGS__ ) - | ^~~~~~~~~~~ -/build/libminc-2.4.05/libsrc2/volume.c:1513:59: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - 1513 | hid_t tmp_id = H5Tget_member_type(handle->ftype_id, i); - | ^ -/build/libminc-2.4.05/libsrc2/volume.c:1514:63: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - 1514 | size_t tmp_off = H5Tget_member_offset(handle->ftype_id, i); - | ^ -/build/libminc-2.4.05/libsrc2/volume.c:1515:59: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - 1515 | char *tmp_nm = H5Tget_member_name(handle->ftype_id, i); - | ^ -[ 17%] Building C object CMakeFiles/minc2.dir/libcommon/read_file_names.c.o -/build/libminc-2.4.05/libcommon/ParseArgv.c: In function 'ParseArgv': -/build/libminc-2.4.05/libcommon/ParseArgv.c:232:36: warning: conversion from 'long int' to 'int' may change value [-Wconversion] - 232 | *((int *) infoPtr->dst) = (intptr_t) infoPtr->src; - | ^ -/build/libminc-2.4.05/libcommon/ParseArgv.c:244:19: warning: conversion from 'long int' to 'int' may change value [-Wconversion] - 244 | ParseLong(argv[srcIndex], &endPtr); - | ^~~~~~~~~ -/build/libminc-2.4.05/libcommon/ParseArgv.c: In function 'PrintUsage': -/build/libminc-2.4.05/libcommon/ParseArgv.c:439:32: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 439 | numSpaces = width + 1 - strlen(infoPtr->key); - | ^ -/build/libminc-2.4.05/libcommon/ParseArgv.c:439:22: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - 439 | numSpaces = width + 1 - strlen(infoPtr->key); - | ^~~~~ -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/libcommon/read_file_names.c.o -MF CMakeFiles/minc2.dir/libcommon/read_file_names.c.o.d -o CMakeFiles/minc2.dir/libcommon/read_file_names.c.o -c /build/libminc-2.4.05/libcommon/read_file_names.c +[ 12%] Building C object CMakeFiles/minc2_static.dir/libcommon/time_stamp.c.o /build/libminc-2.4.05/libcommon/restructure.c: In function 'restructure_array': /build/libminc-2.4.05/libcommon/restructure.c:137:21: warning: unsigned conversion from 'int' to 'size_t' {aka 'long unsigned int'} changes value from '-1' to '18446744073709551615' [-Wsign-conversion] 137 | offset_next = -1; /* Initialize. */ | ^ -[ 17%] Building C object CMakeFiles/minc2_static.dir/libcommon/time_stamp.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/libcommon/time_stamp.c.o -MF CMakeFiles/minc2_static.dir/libcommon/time_stamp.c.o.d -o CMakeFiles/minc2_static.dir/libcommon/time_stamp.c.o -c /build/libminc-2.4.05/libcommon/time_stamp.c -[ 17%] Building C object CMakeFiles/minc2.dir/libcommon/restructure.c.o -/build/libminc-2.4.05/libcommon/read_file_names.c: In function 'read_file_names': -/build/libminc-2.4.05/libcommon/read_file_names.c:53:34: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - 53 | files = malloc(sizeof(*files) * array_size); - | ^ -/build/libminc-2.4.05/libcommon/read_file_names.c:76:48: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - 76 | files = realloc(files, sizeof(*files) * array_size); - | ^ -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/libcommon/restructure.c.o -MF CMakeFiles/minc2.dir/libcommon/restructure.c.o.d -o CMakeFiles/minc2.dir/libcommon/restructure.c.o -c /build/libminc-2.4.05/libcommon/restructure.c -[ 17%] Building C object CMakeFiles/minc2_static.dir/libsrc/dim_conversion.c.o +[ 12%] Building C object CMakeFiles/minc2.dir/libsrc2/label.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/libsrc2/label.c.o -MF CMakeFiles/minc2.dir/libsrc2/label.c.o.d -o CMakeFiles/minc2.dir/libsrc2/label.c.o -c /build/libminc-2.4.05/libsrc2/label.c +[ 12%] Building C object CMakeFiles/minc2_static.dir/libsrc/dim_conversion.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/libsrc/dim_conversion.c.o -MF CMakeFiles/minc2_static.dir/libsrc/dim_conversion.c.o.d -o CMakeFiles/minc2_static.dir/libsrc/dim_conversion.c.o -c /build/libminc-2.4.05/libsrc/dim_conversion.c -[ 18%] Building C object CMakeFiles/minc2.dir/libcommon/time_stamp.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/libcommon/time_stamp.c.o -MF CMakeFiles/minc2.dir/libcommon/time_stamp.c.o.d -o CMakeFiles/minc2.dir/libcommon/time_stamp.c.o -c /build/libminc-2.4.05/libcommon/time_stamp.c -/build/libminc-2.4.05/libcommon/restructure.c: In function 'restructure_array': -/build/libminc-2.4.05/libcommon/restructure.c:137:21: warning: unsigned conversion from 'int' to 'size_t' {aka 'long unsigned int'} changes value from '-1' to '18446744073709551615' [-Wsign-conversion] - 137 | offset_next = -1; /* Initialize. */ - | ^ -[ 18%] Building C object CMakeFiles/minc2.dir/libsrc/dim_conversion.c.o +[ 13%] Building C object CMakeFiles/minc2_static.dir/libsrc/image_conversion.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/libsrc/image_conversion.c.o -MF CMakeFiles/minc2_static.dir/libsrc/image_conversion.c.o.d -o CMakeFiles/minc2_static.dir/libsrc/image_conversion.c.o -c /build/libminc-2.4.05/libsrc/image_conversion.c /build/libminc-2.4.05/libcommon/ParseArgv.c: In function 'ParseArgv': -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/libsrc/dim_conversion.c.o -MF CMakeFiles/minc2.dir/libsrc/dim_conversion.c.o.d -o CMakeFiles/minc2.dir/libsrc/dim_conversion.c.o -c /build/libminc-2.4.05/libsrc/dim_conversion.c /build/libminc-2.4.05/libcommon/ParseArgv.c:232:36: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 232 | *((int *) infoPtr->dst) = (intptr_t) infoPtr->src; | ^ @@ -1581,319 +1351,76 @@ /build/libminc-2.4.05/libcommon/ParseArgv.c:439:22: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 439 | numSpaces = width + 1 - strlen(infoPtr->key); | ^~~~~ -[ 19%] Building C object CMakeFiles/minc2.dir/libsrc/image_conversion.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/libsrc/image_conversion.c.o -MF CMakeFiles/minc2.dir/libsrc/image_conversion.c.o.d -o CMakeFiles/minc2.dir/libsrc/image_conversion.c.o -c /build/libminc-2.4.05/libsrc/image_conversion.c -[ 20%] Building C object CMakeFiles/minc2_static.dir/libsrc/image_conversion.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/libsrc/image_conversion.c.o -MF CMakeFiles/minc2_static.dir/libsrc/image_conversion.c.o.d -o CMakeFiles/minc2_static.dir/libsrc/image_conversion.c.o -c /build/libminc-2.4.05/libsrc/image_conversion.c -[ 20%] Building C object CMakeFiles/minc2_static.dir/libsrc/minc_convenience.c.o +[ 13%] Building C object CMakeFiles/minc2_static.dir/libsrc/minc_convenience.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/libsrc/minc_convenience.c.o -MF CMakeFiles/minc2_static.dir/libsrc/minc_convenience.c.o.d -o CMakeFiles/minc2_static.dir/libsrc/minc_convenience.c.o -c /build/libminc-2.4.05/libsrc/minc_convenience.c -/build/libminc-2.4.05/libsrc/dim_conversion.c: In function 'MI_get_dim_scale': -/build/libminc-2.4.05/libsrc/dim_conversion.c:388:16: warning: conversion from 'long int' to 'int' may change value [-Wconversion] - 388 | icvp->user_dim_size[idim] / icvp->var_dim_size[idim]; - | ^~~~ -/build/libminc-2.4.05/libsrc/dim_conversion.c:395:42: warning: conversion from 'long int' to 'int' may change value [-Wconversion] - 395 | icvp->derv_dim_scale[idim] = 1 + - | ^ -/build/libminc-2.4.05/libsrc/dim_conversion.c:446:13: warning: conversion from 'long int' to 'int' may change value [-Wconversion] - 446 | ( user_dim_size - - | ^ -/build/libminc-2.4.05/libsrc/dim_conversion.c:455:13: warning: conversion from 'long int' to 'int' may change value [-Wconversion] - 455 | ( user_dim_size - 1 - - | ^ -/build/libminc-2.4.05/libsrc/dim_conversion.c:479:30: warning: conversion from 'long int' to 'double' may change value [-Wconversion] - 479 | dimstart -= dimstep * (icvp->var_dim_size[idim]-1); - | ^ -/build/libminc-2.4.05/libsrc/dim_conversion.c: In function 'MI_get_dim_bufsize_step': -/build/libminc-2.4.05/libsrc/dim_conversion.c:518:52: warning: conversion from 'long int' to 'int' may change value [-Wconversion] - 518 | icvp->derv_bufsize_step[icvp->var_ndims-1] = icvp->var_vector_size; - | ^~~~ -In file included from /build/libminc-2.4.05/libsrc/minc_private.h:84, - from /build/libminc-2.4.05/libsrc/dim_conversion.c:93: -/build/libminc-2.4.05/libsrc/dim_conversion.c: In function 'MI_icv_dimconvert': -/build/libminc-2.4.05/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'unsigned char' may change value [-Wfloat-conversion] - 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) - | ^ -/build/libminc-2.4.05/libsrc/minc_basic.h:161:37: note: in expansion of macro 'ROUND' - 161 | *((unsigned char *) ptr) = ROUND(dvalue); \ - | ^~~~~ -/build/libminc-2.4.05/libsrc/dim_conversion.c:726:11: note: in expansion of macro 'MI_FROM_DOUBLE' - 726 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, optr)} - | ^~~~~~~~~~~~~~ -/build/libminc-2.4.05/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'signed char' may change value [-Wfloat-conversion] - 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) - | ^ -/build/libminc-2.4.05/libsrc/minc_basic.h:166:35: note: in expansion of macro 'ROUND' - 166 | *((signed char *) ptr) = ROUND(dvalue); \ - | ^~~~~ -/build/libminc-2.4.05/libsrc/dim_conversion.c:726:11: note: in expansion of macro 'MI_FROM_DOUBLE' - 726 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, optr)} - | ^~~~~~~~~~~~~~ -/build/libminc-2.4.05/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'short unsigned int' may change value [-Wfloat-conversion] - 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) - | ^ -/build/libminc-2.4.05/libsrc/minc_basic.h:175:38: note: in expansion of macro 'ROUND' - 175 | *((unsigned short *) ptr) = ROUND(dvalue); \ - | ^~~~~ -/build/libminc-2.4.05/libsrc/dim_conversion.c:726:11: note: in expansion of macro 'MI_FROM_DOUBLE' - 726 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, optr)} - | ^~~~~~~~~~~~~~ -/build/libminc-2.4.05/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'short int' may change value [-Wfloat-conversion] - 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) - | ^ -/build/libminc-2.4.05/libsrc/minc_basic.h:180:36: note: in expansion of macro 'ROUND' - 180 | *((signed short *) ptr) = ROUND(dvalue); \ - | ^~~~~ -/build/libminc-2.4.05/libsrc/dim_conversion.c:726:11: note: in expansion of macro 'MI_FROM_DOUBLE' - 726 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, optr)} - | ^~~~~~~~~~~~~~ -/build/libminc-2.4.05/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'unsigned int' may change value [-Wfloat-conversion] - 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) - | ^ -/build/libminc-2.4.05/libsrc/minc_basic.h:189:36: note: in expansion of macro 'ROUND' - 189 | *((unsigned int *) ptr) = ROUND(dvalue); \ - | ^~~~~ -/build/libminc-2.4.05/libsrc/dim_conversion.c:726:11: note: in expansion of macro 'MI_FROM_DOUBLE' - 726 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, optr)} - | ^~~~~~~~~~~~~~ -/build/libminc-2.4.05/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] - 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) - | ^ -/build/libminc-2.4.05/libsrc/minc_basic.h:194:34: note: in expansion of macro 'ROUND' - 194 | *((signed int *) ptr) = ROUND(dvalue); \ - | ^~~~~ -/build/libminc-2.4.05/libsrc/dim_conversion.c:726:11: note: in expansion of macro 'MI_FROM_DOUBLE' - 726 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, optr)} - | ^~~~~~~~~~~~~~ -/build/libminc-2.4.05/libsrc/minc_useful.h:123:23: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] - 123 | #define MIN( x, y ) ( ((x) <= (y)) ? (x) : (y) ) - | ^ -/build/libminc-2.4.05/libsrc/minc_basic.h:200:26: note: in expansion of macro 'MIN' - 200 | *((float *) ptr) = MIN(FLT_MAX,dvalue); \ - | ^~~ -/build/libminc-2.4.05/libsrc/dim_conversion.c:726:11: note: in expansion of macro 'MI_FROM_DOUBLE' - 726 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, optr)} - | ^~~~~~~~~~~~~~ -/build/libminc-2.4.05/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'unsigned char' may change value [-Wfloat-conversion] - 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) - | ^ -/build/libminc-2.4.05/libsrc/minc_basic.h:161:37: note: in expansion of macro 'ROUND' - 161 | *((unsigned char *) ptr) = ROUND(dvalue); \ - | ^~~~~ -/build/libminc-2.4.05/libsrc/dim_conversion.c:734:17: note: in expansion of macro 'MI_FROM_DOUBLE' - 734 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, ptr)} - | ^~~~~~~~~~~~~~ -/build/libminc-2.4.05/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'signed char' may change value [-Wfloat-conversion] - 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) - | ^ -/build/libminc-2.4.05/libsrc/minc_basic.h:166:35: note: in expansion of macro 'ROUND' - 166 | *((signed char *) ptr) = ROUND(dvalue); \ - | ^~~~~ -/build/libminc-2.4.05/libsrc/dim_conversion.c:734:17: note: in expansion of macro 'MI_FROM_DOUBLE' - 734 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, ptr)} - | ^~~~~~~~~~~~~~ -/build/libminc-2.4.05/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'short unsigned int' may change value [-Wfloat-conversion] - 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) - | ^ -/build/libminc-2.4.05/libsrc/minc_basic.h:175:38: note: in expansion of macro 'ROUND' - 175 | *((unsigned short *) ptr) = ROUND(dvalue); \ - | ^~~~~ -/build/libminc-2.4.05/libsrc/dim_conversion.c:734:17: note: in expansion of macro 'MI_FROM_DOUBLE' - 734 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, ptr)} - | ^~~~~~~~~~~~~~ -/build/libminc-2.4.05/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'short int' may change value [-Wfloat-conversion] - 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) - | ^ -/build/libminc-2.4.05/libsrc/minc_basic.h:180:36: note: in expansion of macro 'ROUND' - 180 | *((signed short *) ptr) = ROUND(dvalue); \ - | ^~~~~ -/build/libminc-2.4.05/libsrc/dim_conversion.c:734:17: note: in expansion of macro 'MI_FROM_DOUBLE' - 734 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, ptr)} - | ^~~~~~~~~~~~~~ -/build/libminc-2.4.05/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'unsigned int' may change value [-Wfloat-conversion] - 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) - | ^ -/build/libminc-2.4.05/libsrc/minc_basic.h:189:36: note: in expansion of macro 'ROUND' - 189 | *((unsigned int *) ptr) = ROUND(dvalue); \ - | ^~~~~ -/build/libminc-2.4.05/libsrc/dim_conversion.c:734:17: note: in expansion of macro 'MI_FROM_DOUBLE' - 734 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, ptr)} - | ^~~~~~~~~~~~~~ -/build/libminc-2.4.05/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] - 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) - | ^ -/build/libminc-2.4.05/libsrc/minc_basic.h:194:34: note: in expansion of macro 'ROUND' - 194 | *((signed int *) ptr) = ROUND(dvalue); \ - | ^~~~~ -/build/libminc-2.4.05/libsrc/dim_conversion.c:734:17: note: in expansion of macro 'MI_FROM_DOUBLE' - 734 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, ptr)} - | ^~~~~~~~~~~~~~ -/build/libminc-2.4.05/libsrc/minc_useful.h:123:23: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] - 123 | #define MIN( x, y ) ( ((x) <= (y)) ? (x) : (y) ) - | ^ -/build/libminc-2.4.05/libsrc/minc_basic.h:200:26: note: in expansion of macro 'MIN' - 200 | *((float *) ptr) = MIN(FLT_MAX,dvalue); \ - | ^~~ -/build/libminc-2.4.05/libsrc/dim_conversion.c:734:17: note: in expansion of macro 'MI_FROM_DOUBLE' - 734 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, ptr)} - | ^~~~~~~~~~~~~~ -[ 21%] Building C object CMakeFiles/minc2_static.dir/libsrc/nd_loop.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/libsrc/nd_loop.c.o -MF CMakeFiles/minc2_static.dir/libsrc/nd_loop.c.o.d -o CMakeFiles/minc2_static.dir/libsrc/nd_loop.c.o -c /build/libminc-2.4.05/libsrc/nd_loop.c -/build/libminc-2.4.05/libsrc/image_conversion.c: In function 'miicv_setdbl': -/build/libminc-2.4.05/libsrc/image_conversion.c:399:29: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] - 399 | icvp->user_do_range = value; - | ^~~~~ -/build/libminc-2.4.05/libsrc/image_conversion.c:408:28: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] - 408 | icvp->user_do_norm = value; - | ^~~~~ -/build/libminc-2.4.05/libsrc/image_conversion.c:411:30: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] - 411 | icvp->user_user_norm = value; - | ^~~~~ -/build/libminc-2.4.05/libsrc/image_conversion.c:420:33: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] - 420 | icvp->user_do_fillvalue = value; - | ^~~~~ -/build/libminc-2.4.05/libsrc/image_conversion.c:426:31: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] - 426 | icvp->user_do_dimconv = value; - | ^~~~~ -/build/libminc-2.4.05/libsrc/image_conversion.c:429:30: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] - 429 | icvp->user_do_scalar = value; - | ^~~~~ -/build/libminc-2.4.05/libsrc/image_conversion.c:432:14: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] - 432 | ival = value; - | ^~~~~ -/build/libminc-2.4.05/libsrc/image_conversion.c:437:14: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] - 437 | ival = value; - | ^~~~~ -/build/libminc-2.4.05/libsrc/image_conversion.c:442:14: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] - 442 | ival = value; - | ^~~~~ -/build/libminc-2.4.05/libsrc/image_conversion.c:447:14: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] - 447 | ival = value; - | ^~~~~ -/build/libminc-2.4.05/libsrc/image_conversion.c:455:32: warning: conversion from 'double' to 'long int' may change value [-Wfloat-conversion] - 455 | icvp->user_dim_size[0] = value; - | ^~~~~ -/build/libminc-2.4.05/libsrc/image_conversion.c:458:32: warning: conversion from 'double' to 'long int' may change value [-Wfloat-conversion] - 458 | icvp->user_dim_size[1] = value; - | ^~~~~ -/build/libminc-2.4.05/libsrc/image_conversion.c:461:32: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] - 461 | icvp->user_keep_aspect = value; +[ 14%] Building C object CMakeFiles/minc2.dir/libsrc2/m2util.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/libsrc2/m2util.c.o -MF CMakeFiles/minc2.dir/libsrc2/m2util.c.o.d -o CMakeFiles/minc2.dir/libsrc2/m2util.c.o -c /build/libminc-2.4.05/libsrc2/m2util.c +/build/libminc-2.4.05/libsrc2/hyper.c: In function 'mirw_hyperslab_raw': +/build/libminc-2.4.05/libsrc2/hyper.c:261:25: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 261 | restructure_array(ndims, buffer, icount, H5Tget_size(type_id), + | ^~~~~ +/build/libminc-2.4.05/libsrc2/hyper.c:299:25: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 299 | restructure_array(ndims, temp_buffer, icount, H5Tget_size(type_id), + | ^~~~~ +/build/libminc-2.4.05/libsrc2/hyper.c: In function 'mirw_hyperslab_icv': +/build/libminc-2.4.05/libsrc2/hyper.c:436:11: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 436 | ndims = volume->number_of_dims; + | ^~~~~~ +/build/libminc-2.4.05/libsrc2/hyper.c:448:32: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] + 448 | mspc_id = H5Screate_simple(ndims, hdf_count, NULL); | ^~~~~ -/build/libminc-2.4.05/libsrc/image_conversion.c:475:38: warning: conversion from 'double' to 'long int' may change value [-Wfloat-conversion] - 475 | icvp->user_dim_size[idim] = value; - | ^~~~~ -/build/libminc-2.4.05/libsrc/image_conversion.c: In function 'miicv_inqdbl': -/build/libminc-2.4.05/libsrc/image_conversion.c:703:16: warning: conversion from 'long int' to 'double' may change value [-Wconversion] - 703 | *value = icvp->user_dim_size[0]; break; - | ^~~~ -/build/libminc-2.4.05/libsrc/image_conversion.c:705:16: warning: conversion from 'long int' to 'double' may change value [-Wconversion] - 705 | *value = icvp->user_dim_size[1]; break; - | ^~~~ -/build/libminc-2.4.05/libsrc/image_conversion.c:728:19: warning: conversion from 'long int' to 'double' may change value [-Wconversion] - 728 | *value = icvp->user_dim_size[idim]; - | ^~~~ -/build/libminc-2.4.05/libsrc/image_conversion.c: In function 'miicv_inqint': -/build/libminc-2.4.05/libsrc/image_conversion.c:774:13: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] - 774 | *value = dvalue; - | ^~~~~~ -/build/libminc-2.4.05/libsrc/image_conversion.c: In function 'miicv_inqlong': -/build/libminc-2.4.05/libsrc/image_conversion.c:803:13: warning: conversion from 'double' to 'long int' may change value [-Wfloat-conversion] - 803 | *value = dvalue; - | ^~~~~~ -In file included from /build/libminc-2.4.05/libsrc/minc_private.h:84, - from /build/libminc-2.4.05/libsrc/image_conversion.c:173: -/build/libminc-2.4.05/libsrc/image_conversion.c: In function 'MI_icv_zero_buffer': -/build/libminc-2.4.05/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'unsigned char' may change value [-Wfloat-conversion] - 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) - | ^ -/build/libminc-2.4.05/libsrc/minc_basic.h:161:37: note: in expansion of macro 'ROUND' - 161 | *((unsigned char *) ptr) = ROUND(dvalue); \ - | ^~~~~ -/build/libminc-2.4.05/libsrc/image_conversion.c:1490:5: note: in expansion of macro 'MI_FROM_DOUBLE' - 1490 | {MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)} - | ^~~~~~~~~~~~~~ -/build/libminc-2.4.05/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'signed char' may change value [-Wfloat-conversion] - 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) - | ^ -/build/libminc-2.4.05/libsrc/minc_basic.h:166:35: note: in expansion of macro 'ROUND' - 166 | *((signed char *) ptr) = ROUND(dvalue); \ - | ^~~~~ -/build/libminc-2.4.05/libsrc/image_conversion.c:1490:5: note: in expansion of macro 'MI_FROM_DOUBLE' - 1490 | {MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)} - | ^~~~~~~~~~~~~~ -/build/libminc-2.4.05/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'short unsigned int' may change value [-Wfloat-conversion] - 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) - | ^ -/build/libminc-2.4.05/libsrc/minc_basic.h:175:38: note: in expansion of macro 'ROUND' - 175 | *((unsigned short *) ptr) = ROUND(dvalue); \ - | ^~~~~ -/build/libminc-2.4.05/libsrc/image_conversion.c:1490:5: note: in expansion of macro 'MI_FROM_DOUBLE' - 1490 | {MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)} - | ^~~~~~~~~~~~~~ -/build/libminc-2.4.05/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'short int' may change value [-Wfloat-conversion] - 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) - | ^ -/build/libminc-2.4.05/libsrc/minc_basic.h:180:36: note: in expansion of macro 'ROUND' - 180 | *((signed short *) ptr) = ROUND(dvalue); \ - | ^~~~~ -/build/libminc-2.4.05/libsrc/image_conversion.c:1490:5: note: in expansion of macro 'MI_FROM_DOUBLE' - 1490 | {MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)} - | ^~~~~~~~~~~~~~ -/build/libminc-2.4.05/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'unsigned int' may change value [-Wfloat-conversion] - 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) - | ^ -/build/libminc-2.4.05/libsrc/minc_basic.h:189:36: note: in expansion of macro 'ROUND' - 189 | *((unsigned int *) ptr) = ROUND(dvalue); \ - | ^~~~~ -/build/libminc-2.4.05/libsrc/image_conversion.c:1490:5: note: in expansion of macro 'MI_FROM_DOUBLE' - 1490 | {MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)} - | ^~~~~~~~~~~~~~ -/build/libminc-2.4.05/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] - 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) - | ^ -/build/libminc-2.4.05/libsrc/minc_basic.h:194:34: note: in expansion of macro 'ROUND' - 194 | *((signed int *) ptr) = ROUND(dvalue); \ - | ^~~~~ -/build/libminc-2.4.05/libsrc/image_conversion.c:1490:5: note: in expansion of macro 'MI_FROM_DOUBLE' - 1490 | {MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)} - | ^~~~~~~~~~~~~~ -/build/libminc-2.4.05/libsrc/minc_useful.h:123:23: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] - 123 | #define MIN( x, y ) ( ((x) <= (y)) ? (x) : (y) ) - | ^ -/build/libminc-2.4.05/libsrc/minc_basic.h:200:26: note: in expansion of macro 'MIN' - 200 | *((float *) ptr) = MIN(FLT_MAX,dvalue); \ - | ^~~ -/build/libminc-2.4.05/libsrc/image_conversion.c:1490:5: note: in expansion of macro 'MI_FROM_DOUBLE' - 1490 | {MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)} - | ^~~~~~~~~~~~~~ -[ 21%] Building C object CMakeFiles/minc2.dir/libsrc/minc_convenience.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/libsrc/minc_convenience.c.o -MF CMakeFiles/minc2.dir/libsrc/minc_convenience.c.o.d -o CMakeFiles/minc2.dir/libsrc/minc_convenience.c.o -c /build/libminc-2.4.05/libsrc/minc_convenience.c -In file included from /build/libminc-2.4.05/libsrc2/volume.c:33: -In function '_miget_file_dimension', - inlined from 'miopen_volume' at /build/libminc-2.4.05/libsrc2/volume.c:1449:5: -/build/libminc-2.4.05/libsrc2/minc2_private.h:14:22: warning: '%s' directive writing up to 127 bytes into a region of size 107 [-Wformat-overflow=] - 14 | #define MI_ROOT_PATH "/minc-2.0" - | ^~~~~~~~~~~ -/build/libminc-2.4.05/libsrc2/volume.c:1220:17: note: in expansion of macro 'MI_ROOT_PATH' - 1220 | sprintf(path, MI_ROOT_PATH "/dimensions/%s", dimname); - | ^~~~~~~~~~~~ -/build/libminc-2.4.05/libsrc2/volume.c: In function 'miopen_volume': -/build/libminc-2.4.05/libsrc2/volume.c:1753:53: note: format string is defined here - 1753 | miset_attribute(volume, MI_ROOT_PATH "/image/0/image", "valid_range", - | ^~ -In file included from /usr/include/stdio.h:906, - from /usr/include/hdf5/serial/H5Epublic.h:20, - from /usr/include/hdf5/serial/hdf5.h:26, - from /build/libminc-2.4.05/libsrc2/volume.c:8: -In function 'sprintf', - inlined from '_miget_file_dimension' at /build/libminc-2.4.05/libsrc2/volume.c:1220:3, - inlined from 'miopen_volume' at /build/libminc-2.4.05/libsrc2/volume.c:1449:5: -/usr/include/x86_64-linux-gnu/bits/stdio2.h:30:10: note: '__builtin___sprintf_chk' output between 22 and 149 bytes into a destination of size 128 - 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 31 | __glibc_objsize (__s), __fmt, - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 32 | __va_arg_pack ()); - | ~~~~~~~~~~~~~~~~~ +/build/libminc-2.4.05/libsrc2/hyper.c:456:44: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] + 456 | miget_hyperslab_size_hdf(buffer_type_id, ndims, hdf_count, &buffer_size); + | ^~~~~ +[ 14%] Building C object CMakeFiles/minc2.dir/libsrc2/record.c.o +/build/libminc-2.4.05/libsrc2/hyper.c:499:21: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] + 499 | slice_ndims = ndims; + | ^~~~~ +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/libsrc2/record.c.o -MF CMakeFiles/minc2.dir/libsrc2/record.c.o.d -o CMakeFiles/minc2.dir/libsrc2/record.c.o -c /build/libminc-2.4.05/libsrc2/record.c +/build/libminc-2.4.05/libsrc2/hyper.c:510:14: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 510 | for (i = slice_ndims; i < ndims; i++ ) { + | ^~~~~~~~~~~ +/build/libminc-2.4.05/libsrc2/hyper.c:680:40: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] + 680 | imap[volume->dim_indices[i]] = i; + | ^ +/build/libminc-2.4.05/libsrc2/label.c: In function 'miswap4': +/build/libminc-2.4.05/libsrc2/label.c:40:12: warning: conversion to 'int' from 'unsigned int' may change the sign of the result [-Wsign-conversion] + 40 | return (tmp); + | ^ +/build/libminc-2.4.05/libsrc2/label.c: In function 'miget_label_value_by_index': +/build/libminc-2.4.05/libsrc2/label.c:199:51: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + 199 | result = H5Tget_member_value(volume->mtype_id,idx,value); + | ^~~ +/build/libminc-2.4.05/libsrc2/hyper.c: In function 'mirw_hyperslab_normalized': +/build/libminc-2.4.05/libsrc2/hyper.c:925:11: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 925 | ndims = volume->number_of_dims; + | ^~~~~~ +In file included from /build/libminc-2.4.05/libcommon/minc2_error.h:38, + from /build/libminc-2.4.05/libsrc2/minc2.h:11, + from /build/libminc-2.4.05/libsrc2/hyper.c:19: +/build/libminc-2.4.05/libsrc2/hyper.c:936:50: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] + 936 | MI_CHECK_HDF_CALL(mspc_id = H5Screate_simple(ndims, hdf_count, NULL),"H5Screate_simple"); + | ^~~~~ +/build/libminc-2.4.05/libcommon/minc_error.h:188:42: note: in definition of macro 'MI_CHECK_HDF_CALL' + 188 | #define MI_CHECK_HDF_CALL(var,call) {if((var)<0) MI_LOG_ERROR(MI2_MSG_HDF5,call);} + | ^~~ +/build/libminc-2.4.05/libsrc2/hyper.c:943:43: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] + 943 | miget_hyperslab_size_hdf(volume_type_id,ndims,hdf_count,&buffer_size); + | ^~~~~ +/build/libminc-2.4.05/libsrc2/hyper.c:944:43: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] + 944 | miget_hyperslab_size_hdf(buffer_type_id,ndims,hdf_count,&input_buffer_size); + | ^~~~~ +/build/libminc-2.4.05/libsrc2/hyper.c:983:21: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] + 983 | slice_ndims = ndims; + | ^~~~~ +/build/libminc-2.4.05/libsrc2/hyper.c:994:14: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 994 | for (i = slice_ndims; i < ndims; i++ ) { + | ^~~~~~~~~~~ +[ 15%] Building C object CMakeFiles/minc2_static.dir/libsrc/nd_loop.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/libsrc/nd_loop.c.o -MF CMakeFiles/minc2_static.dir/libsrc/nd_loop.c.o.d -o CMakeFiles/minc2_static.dir/libsrc/nd_loop.c.o -c /build/libminc-2.4.05/libsrc/nd_loop.c +/build/libminc-2.4.05/libsrc2/hyper.c:1122:40: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] + 1122 | imap[volume->dim_indices[i]] = i; + | ^ /build/libminc-2.4.05/libsrc/image_conversion.c: In function 'miicv_setdbl': /build/libminc-2.4.05/libsrc/image_conversion.c:399:29: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] 399 | icvp->user_do_range = value; @@ -1955,7 +1482,6 @@ /build/libminc-2.4.05/libsrc/image_conversion.c:803:13: warning: conversion from 'double' to 'long int' may change value [-Wfloat-conversion] 803 | *value = dvalue; | ^~~~~~ -[ 21%] Building C object CMakeFiles/minc2_static.dir/libsrc/netcdf_convenience.c.o In file included from /build/libminc-2.4.05/libsrc/minc_private.h:84, from /build/libminc-2.4.05/libsrc/image_conversion.c:173: /build/libminc-2.4.05/libsrc/image_conversion.c: In function 'MI_icv_zero_buffer': @@ -1977,7 +1503,6 @@ /build/libminc-2.4.05/libsrc/image_conversion.c:1490:5: note: in expansion of macro 'MI_FROM_DOUBLE' 1490 | {MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)} | ^~~~~~~~~~~~~~ -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/libsrc/netcdf_convenience.c.o -MF CMakeFiles/minc2_static.dir/libsrc/netcdf_convenience.c.o.d -o CMakeFiles/minc2_static.dir/libsrc/netcdf_convenience.c.o -c /build/libminc-2.4.05/libsrc/netcdf_convenience.c /build/libminc-2.4.05/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'short unsigned int' may change value [-Wfloat-conversion] 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) | ^ @@ -2023,89 +1548,13 @@ /build/libminc-2.4.05/libsrc/image_conversion.c:1490:5: note: in expansion of macro 'MI_FROM_DOUBLE' 1490 | {MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)} | ^~~~~~~~~~~~~~ -/build/libminc-2.4.05/libsrc/minc_convenience.c: In function 'miset_valid_range': -/build/libminc-2.4.05/libsrc/minc_convenience.c:430:17: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] - 430 | fval[0] = valid_range[0]; - | ^~~~~~~~~~~ -/build/libminc-2.4.05/libsrc/minc_convenience.c:431:17: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] - 431 | fval[1] = valid_range[1]; - | ^~~~~~~~~~~ -/build/libminc-2.4.05/libsrc/minc_convenience.c: In function 'miattput_pointer': -/build/libminc-2.4.05/libsrc/minc_convenience.c:638:10: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - 638 | index=strlen(strcpy(pointer_string,MI_VARATT_POINTER_PREFIX)); - | ^~~~~~ -In file included from /build/libminc-2.4.05/libsrc/minc_private.h:84, - from /build/libminc-2.4.05/libsrc/minc_convenience.c:152: -/build/libminc-2.4.05/libsrc/minc_convenience.c: In function 'miadd_child': -/build/libminc-2.4.05/libsrc/minc_convenience.c:743:56: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 743 | if ((child_list = MALLOC(child_list_size+MAX_NC_NAME+ - | ^ -/build/libminc-2.4.05/libsrc/minc_useful.h:138:39: note: in definition of macro 'MALLOC' - 138 | ( (type *) malloc( (size_t) (n_items) * sizeof(type) ) ) - | ^~~~~~~ -In file included from /build/libminc-2.4.05/libsrc/minc_private.h:89: -/build/libminc-2.4.05/libsrc/minc_convenience.c:746:49: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 746 | child_list_size+MAX_NC_NAME+strlen(MI_CHILD_SEPARATOR)); - | ^ -/build/libminc-2.4.05/libcommon/minc_error.h:187:75: note: in definition of macro 'MI_LOG_ERROR' - 187 | #define MI_LOG_ERROR(code,...) mi2log_message(__FILE__, __LINE__, code, ##__VA_ARGS__ ) - | ^~~~~~~~~~~ -/build/libminc-2.4.05/libsrc/minc_convenience.c:765:23: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 765 | child_list_size += strlen(MI_CHILD_SEPARATOR); - | ^~ -/build/libminc-2.4.05/libsrc/minc_convenience.c:780:23: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 780 | child_list_size -= strlen(MI_CHILD_SEPARATOR); - | ^~ -/build/libminc-2.4.05/libsrc/minc_convenience.c:780:26: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - 780 | child_list_size -= strlen(MI_CHILD_SEPARATOR); - | ^~~~~~ -/build/libminc-2.4.05/libsrc/minc_convenience.c: In function 'miappend_history': -/build/libminc-2.4.05/libsrc/minc_convenience.c:1378:30: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 1378 | att_val = malloc(att_len + strlen(tm_stamp) + 2); - | ^ -/build/libminc-2.4.05/libsrc/minc_convenience.c: In function 'miset_valid_range': -/build/libminc-2.4.05/libsrc/minc_convenience.c:430:17: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] - 430 | fval[0] = valid_range[0]; - | ^~~~~~~~~~~ -/build/libminc-2.4.05/libsrc/minc_convenience.c:431:17: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] - 431 | fval[1] = valid_range[1]; - | ^~~~~~~~~~~ -/build/libminc-2.4.05/libsrc/minc_convenience.c: In function 'miattput_pointer': -/build/libminc-2.4.05/libsrc/minc_convenience.c:638:10: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - 638 | index=strlen(strcpy(pointer_string,MI_VARATT_POINTER_PREFIX)); - | ^~~~~~ -In file included from /build/libminc-2.4.05/libsrc/minc_private.h:84, - from /build/libminc-2.4.05/libsrc/minc_convenience.c:152: -/build/libminc-2.4.05/libsrc/minc_convenience.c: In function 'miadd_child': /build/libminc-2.4.05/libsrc/dim_conversion.c: In function 'MI_get_dim_scale': -/build/libminc-2.4.05/libsrc/minc_convenience.c:743:56: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 743 | if ((child_list = MALLOC(child_list_size+MAX_NC_NAME+ - | ^ -/build/libminc-2.4.05/libsrc/minc_useful.h:138:39: note: in definition of macro 'MALLOC' - 138 | ( (type *) malloc( (size_t) (n_items) * sizeof(type) ) ) - | ^~~~~~~ /build/libminc-2.4.05/libsrc/dim_conversion.c:388:16: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 388 | icvp->user_dim_size[idim] / icvp->var_dim_size[idim]; | ^~~~ -In file included from /build/libminc-2.4.05/libsrc/minc_private.h:89: -/build/libminc-2.4.05/libsrc/minc_convenience.c:746:49: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 746 | child_list_size+MAX_NC_NAME+strlen(MI_CHILD_SEPARATOR)); - | ^ -/build/libminc-2.4.05/libcommon/minc_error.h:187:75: note: in definition of macro 'MI_LOG_ERROR' - 187 | #define MI_LOG_ERROR(code,...) mi2log_message(__FILE__, __LINE__, code, ##__VA_ARGS__ ) - | ^~~~~~~~~~~ /build/libminc-2.4.05/libsrc/dim_conversion.c:395:42: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 395 | icvp->derv_dim_scale[idim] = 1 + | ^ -/build/libminc-2.4.05/libsrc/minc_convenience.c:765:23: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 765 | child_list_size += strlen(MI_CHILD_SEPARATOR); - | ^~ -/build/libminc-2.4.05/libsrc/minc_convenience.c:780:23: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 780 | child_list_size -= strlen(MI_CHILD_SEPARATOR); - | ^~ -/build/libminc-2.4.05/libsrc/minc_convenience.c:780:26: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - 780 | child_list_size -= strlen(MI_CHILD_SEPARATOR); - | ^~~~~~ /build/libminc-2.4.05/libsrc/dim_conversion.c:446:13: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 446 | ( user_dim_size - | ^ @@ -2119,10 +1568,6 @@ /build/libminc-2.4.05/libsrc/dim_conversion.c:518:52: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 518 | icvp->derv_bufsize_step[icvp->var_ndims-1] = icvp->var_vector_size; | ^~~~ -/build/libminc-2.4.05/libsrc/minc_convenience.c: In function 'miappend_history': -/build/libminc-2.4.05/libsrc/minc_convenience.c:1378:30: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 1378 | att_val = malloc(att_len + strlen(tm_stamp) + 2); - | ^ In file included from /build/libminc-2.4.05/libsrc/minc_private.h:84, from /build/libminc-2.4.05/libsrc/dim_conversion.c:93: /build/libminc-2.4.05/libsrc/dim_conversion.c: In function 'MI_icv_dimconvert': @@ -2252,8 +1697,104 @@ /build/libminc-2.4.05/libsrc/dim_conversion.c:734:17: note: in expansion of macro 'MI_FROM_DOUBLE' 734 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, ptr)} | ^~~~~~~~~~~~~~ -[ 22%] Building C object CMakeFiles/minc2_static.dir/libsrc/value_conversion.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/libsrc/value_conversion.c.o -MF CMakeFiles/minc2_static.dir/libsrc/value_conversion.c.o.d -o CMakeFiles/minc2_static.dir/libsrc/value_conversion.c.o -c /build/libminc-2.4.05/libsrc/value_conversion.c +/build/libminc-2.4.05/libsrc2/record.c: In function 'miget_record_field_name': +/build/libminc-2.4.05/libsrc2/record.c:57:50: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + 57 | *name = H5Tget_member_name(volume->ftype_id, index); + | ^~~~~ +/build/libminc-2.4.05/libsrc2/record.c: In function 'miset_record_field_name': +/build/libminc-2.4.05/libsrc2/record.c:91:20: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 91 | offset = index * H5Tget_size(ftype_id); + | ^ +/build/libminc-2.4.05/libsrc/minc_convenience.c: In function 'miset_valid_range': +/build/libminc-2.4.05/libsrc/minc_convenience.c:430:17: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] + 430 | fval[0] = valid_range[0]; + | ^~~~~~~~~~~ +/build/libminc-2.4.05/libsrc/minc_convenience.c:431:17: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] + 431 | fval[1] = valid_range[1]; + | ^~~~~~~~~~~ +/build/libminc-2.4.05/libsrc2/m2util.c: In function 'midownsample_slice': +/build/libminc-2.4.05/libsrc/minc_convenience.c: In function 'miattput_pointer': +/build/libminc-2.4.05/libsrc/minc_convenience.c:638:10: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + 638 | index=strlen(strcpy(pointer_string,MI_VARATT_POINTER_PREFIX)); + | ^~~~~~ +/build/libminc-2.4.05/libsrc2/m2util.c:1491:18: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 1491 | x1 = x; + | ^ +/build/libminc-2.4.05/libsrc2/m2util.c:1492:26: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 1492 | y1 = y + ( j * scale ); + | ^ +/build/libminc-2.4.05/libsrc2/m2util.c:1492:20: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 1492 | y1 = y + ( j * scale ); + | ^ +/build/libminc-2.4.05/libsrc2/m2util.c:1493:26: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 1493 | z1 = z + ( k * scale ); + | ^ +/build/libminc-2.4.05/libsrc2/m2util.c:1493:20: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 1493 | z1 = z + ( k * scale ); + | ^ +/build/libminc-2.4.05/libsrc2/m2util.c: In function 'miconvert_hyperslab_to_real': +/build/libminc-2.4.05/libsrc2/m2util.c:1602:46: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 1602 | r = miget_slice_range ( volume, pos, volume->number_of_dims, + | ~~~~~~^~~~~~~~~~~~~~~~ +/build/libminc-2.4.05/libsrc2/m2util.c:1627:52: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 1627 | r = miget_slice_range ( volume, pos, volume->number_of_dims, + | ~~~~~~^~~~~~~~~~~~~~~~ +In file included from /build/libminc-2.4.05/libsrc/minc_private.h:84, + from /build/libminc-2.4.05/libsrc/minc_convenience.c:152: +/build/libminc-2.4.05/libsrc/minc_convenience.c: In function 'miadd_child': +/build/libminc-2.4.05/libsrc/minc_convenience.c:743:56: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 743 | if ((child_list = MALLOC(child_list_size+MAX_NC_NAME+ + | ^ +/build/libminc-2.4.05/libsrc/minc_useful.h:138:39: note: in definition of macro 'MALLOC' + 138 | ( (type *) malloc( (size_t) (n_items) * sizeof(type) ) ) + | ^~~~~~~ +/build/libminc-2.4.05/libsrc2/m2util.c: In function 'minc_update_thumbnail': +In file included from /build/libminc-2.4.05/libsrc/minc_private.h:89: +/build/libminc-2.4.05/libsrc/minc_convenience.c:746:49: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 746 | child_list_size+MAX_NC_NAME+strlen(MI_CHILD_SEPARATOR)); + | ^ +/build/libminc-2.4.05/libcommon/minc_error.h:187:75: note: in definition of macro 'MI_LOG_ERROR' + 187 | #define MI_LOG_ERROR(code,...) mi2log_message(__FILE__, __LINE__, code, ##__VA_ARGS__ ) + | ^~~~~~~~~~~ +/build/libminc-2.4.05/libsrc2/m2util.c:1719:25: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 1719 | osize[i] = isize[i] / scale; + | ^ +/build/libminc-2.4.05/libsrc/minc_convenience.c:765:23: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 765 | child_list_size += strlen(MI_CHILD_SEPARATOR); + | ^~ +/build/libminc-2.4.05/libsrc2/m2util.c:1779:20: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 1779 | in_bytes = scale * isize[1] * isize[2] * sizeof ( double ); + | ^ +/build/libminc-2.4.05/libsrc/minc_convenience.c:780:23: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 780 | child_list_size -= strlen(MI_CHILD_SEPARATOR); + | ^~ +/build/libminc-2.4.05/libsrc/minc_convenience.c:780:26: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + 780 | child_list_size -= strlen(MI_CHILD_SEPARATOR); + | ^~~~~~ +/build/libminc-2.4.05/libsrc2/m2util.c:1785:14: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 1785 | count[0] = scale; + | ^~~~~ +/build/libminc-2.4.05/libsrc2/m2util.c:1800:22: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 1800 | start[0] = slice * scale; + | ^ +/build/libminc-2.4.05/libsrc2/m2util.c:1803:16: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 1803 | count[0] = scale; + | ^~~~~ +/build/libminc-2.4.05/libsrc2/m2util.c: In function 'alloc1d': +/build/libminc-2.4.05/libsrc2/m2util.c:1914:52: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + 1914 | return ( ( double * ) malloc ( sizeof ( double ) * n ) ); + | ^ +/build/libminc-2.4.05/libsrc2/m2util.c: In function 'alloc2d': +/build/libminc-2.4.05/libsrc2/m2util.c:1923:34: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + 1923 | mat = ( double ** ) malloc ( n * sizeof ( double * ) ); + | ^ +/build/libminc-2.4.05/libsrc2/m2util.c:1930:38: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + 1930 | mat[i] = ( double * ) malloc ( m * sizeof ( double ) ); + | ^ +/build/libminc-2.4.05/libsrc/minc_convenience.c: In function 'miappend_history': +/build/libminc-2.4.05/libsrc/minc_convenience.c:1378:30: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 1378 | att_val = malloc(att_len + strlen(tm_stamp) + 2); + | ^ In file included from /build/libminc-2.4.05/libsrc2/volume.c:33: In function '_miget_file_dimension', inlined from 'miopen_volume' at /build/libminc-2.4.05/libsrc2/volume.c:1449:5: @@ -2281,6 +1822,17 @@ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ +[ 15%] Building C object CMakeFiles/minc2_static.dir/libsrc/netcdf_convenience.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/libsrc/netcdf_convenience.c.o -MF CMakeFiles/minc2_static.dir/libsrc/netcdf_convenience.c.o.d -o CMakeFiles/minc2_static.dir/libsrc/netcdf_convenience.c.o -c /build/libminc-2.4.05/libsrc/netcdf_convenience.c +[ 15%] Building C object CMakeFiles/minc2.dir/libsrc2/slice.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/libsrc2/slice.c.o -MF CMakeFiles/minc2.dir/libsrc2/slice.c.o.d -o CMakeFiles/minc2.dir/libsrc2/slice.c.o -c /build/libminc-2.4.05/libsrc2/slice.c +[ 16%] Building C object CMakeFiles/minc2.dir/libsrc2/valid.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/libsrc2/valid.c.o -MF CMakeFiles/minc2.dir/libsrc2/valid.c.o.d -o CMakeFiles/minc2.dir/libsrc2/valid.c.o -c /build/libminc-2.4.05/libsrc2/valid.c +/build/libminc-2.4.05/libsrc2/slice.c: In function 'mirw_slice_minmax': +/build/libminc-2.4.05/libsrc2/slice.c:72:11: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 72 | ndims = H5Sget_simple_extent_ndims ( fspc_id ); + | ^~~~~~~~~~~~~~~~~~~~~~~~~~ +[ 17%] Building C object CMakeFiles/minc2_static.dir/libsrc/value_conversion.c.o In file included from /build/libminc-2.4.05/libsrc/minc_private.h:84, from /build/libminc-2.4.05/libsrc/netcdf_convenience.c:182: /build/libminc-2.4.05/libsrc/netcdf_convenience.c: In function 'miexpand_file': @@ -2290,18 +1842,17 @@ /build/libminc-2.4.05/libsrc/minc_useful.h:138:39: note: in definition of macro 'MALLOC' 138 | ( (type *) malloc( (size_t) (n_items) * sizeof(type) ) ) | ^~~~~~~ +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/libsrc/value_conversion.c.o -MF CMakeFiles/minc2_static.dir/libsrc/value_conversion.c.o.d -o CMakeFiles/minc2_static.dir/libsrc/value_conversion.c.o -c /build/libminc-2.4.05/libsrc/value_conversion.c /build/libminc-2.4.05/libsrc/netcdf_convenience.c: In function 'miattputstr': /build/libminc-2.4.05/libsrc/netcdf_convenience.c:1033:38: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 1033 | strlen(value) + 1, value); | ~~~~~~~~~~~~~~^~~ -[ 22%] Building C object CMakeFiles/minc2_static.dir/libsrc/voxel_loop.c.o +[ 17%] Building C object CMakeFiles/minc2.dir/libsrc2/volprops.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/libsrc2/volprops.c.o -MF CMakeFiles/minc2.dir/libsrc2/volprops.c.o.d -o CMakeFiles/minc2.dir/libsrc2/volprops.c.o -c /build/libminc-2.4.05/libsrc2/volprops.c +[ 18%] Building C object CMakeFiles/minc2.dir/libsrc2/volume.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/libsrc2/volume.c.o -MF CMakeFiles/minc2.dir/libsrc2/volume.c.o.d -o CMakeFiles/minc2.dir/libsrc2/volume.c.o -c /build/libminc-2.4.05/libsrc2/volume.c +[ 18%] Building C object CMakeFiles/minc2_static.dir/libsrc/voxel_loop.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/libsrc/voxel_loop.c.o -MF CMakeFiles/minc2_static.dir/libsrc/voxel_loop.c.o.d -o CMakeFiles/minc2_static.dir/libsrc/voxel_loop.c.o -c /build/libminc-2.4.05/libsrc/voxel_loop.c -[ 22%] Building C object CMakeFiles/minc2_static.dir/libsrc/hdf_convenience.c.o -[ 23%] Building C object CMakeFiles/minc2_static.dir/libsrc/minc_compat.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/libsrc/hdf_convenience.c.o -MF CMakeFiles/minc2_static.dir/libsrc/hdf_convenience.c.o.d -o CMakeFiles/minc2_static.dir/libsrc/hdf_convenience.c.o -c /build/libminc-2.4.05/libsrc/hdf_convenience.c -[ 24%] Building C object CMakeFiles/minc2.dir/libsrc/nd_loop.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/libsrc/minc_compat.c.o -MF CMakeFiles/minc2_static.dir/libsrc/minc_compat.c.o.d -o CMakeFiles/minc2_static.dir/libsrc/minc_compat.c.o -c /build/libminc-2.4.05/libsrc/minc_compat.c -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/libsrc/nd_loop.c.o -MF CMakeFiles/minc2.dir/libsrc/nd_loop.c.o.d -o CMakeFiles/minc2.dir/libsrc/nd_loop.c.o -c /build/libminc-2.4.05/libsrc/nd_loop.c /build/libminc-2.4.05/libsrc/value_conversion.c: In function 'MI_convert_type': /build/libminc-2.4.05/libsrc/value_conversion.c:622:49: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 622 | (size_t) number_of_values*inincr); @@ -2371,8 +1922,114 @@ /build/libminc-2.4.05/libsrc/value_conversion.c:645:11: note: in expansion of macro 'MI_FROM_DOUBLE' 645 | {MI_FROM_DOUBLE(dvalue, outtype, outsgn, outptr)} | ^~~~~~~~~~~~~~ -[ 24%] Building C object CMakeFiles/minc2.dir/libsrc/netcdf_convenience.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/libsrc/netcdf_convenience.c.o -MF CMakeFiles/minc2.dir/libsrc/netcdf_convenience.c.o.d -o CMakeFiles/minc2.dir/libsrc/netcdf_convenience.c.o -c /build/libminc-2.4.05/libsrc/netcdf_convenience.c +[ 18%] Building C object CMakeFiles/minc2.dir/libcommon/minc2_error.c.o +/build/libminc-2.4.05/libsrc2/volprops.c: In function 'miget_volume_props': +/build/libminc-2.4.05/libsrc2/volprops.c:133:60: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + 133 | handle->edge_lengths = (int *)malloc(handle->edge_count*sizeof(int)); + | ^ +/build/libminc-2.4.05/libsrc2/volprops.c:139:33: warning: conversion from 'hsize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] + 139 | handle->edge_lengths[i] = dims[i]; + | ^~~~ +/build/libminc-2.4.05/libsrc2/volprops.c:151:43: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + 151 | fcode = H5Pget_filter1(hdf_plist, i, &flags, &cd_nelmts, + | ^ +/build/libminc-2.4.05/libsrc2/volprops.c:156:34: warning: conversion to 'int' from 'unsigned int' may change the sign of the result [-Wsign-conversion] + 156 | handle->zlib_level = cd_values[0]; + | ^~~~~~~~~ +/build/libminc-2.4.05/libsrc2/volprops.c: In function 'miset_props_blocking': +/build/libminc-2.4.05/libsrc2/volprops.c:432:52: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + 432 | props->edge_lengths = (int *) malloc(edge_count*sizeof(int)); + | ^ +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/libcommon/minc2_error.c.o -MF CMakeFiles/minc2.dir/libcommon/minc2_error.c.o.d -o CMakeFiles/minc2.dir/libcommon/minc2_error.c.o -c /build/libminc-2.4.05/libcommon/minc2_error.c +/build/libminc-2.4.05/libsrc2/volume.c: In function '_hdf_open': +/build/libminc-2.4.05/libsrc2/volume.c:124:117: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 124 | H5Pset_cache(prp_id, 0, 2503, miget_cfg_present(MICFG_MINC_FILE_CACHE)?miget_cfg_int(MICFG_MINC_FILE_CACHE)*100000:_MI1_MAX_VAR_BUFFER_SIZE*10, 1.0); + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/libminc-2.4.05/libsrc2/volume.c:136:24: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + 136 | fd = H5Fopen(path, mode, prp_id); + | ^~~~ +/build/libminc-2.4.05/libsrc2/volume.c: In function '_hdf_create': +/build/libminc-2.4.05/libsrc2/volume.c:228:115: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 228 | H5Pset_cache(fpid, 0, 2503, miget_cfg_present(MICFG_MINC_FILE_CACHE)?miget_cfg_int(MICFG_MINC_FILE_CACHE)*100000:_MI1_MAX_VAR_BUFFER_SIZE*100, 1.0); + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/libminc-2.4.05/libsrc2/volume.c:231:26: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + 231 | fd = H5Fcreate(path, cmode, H5P_DEFAULT, fpid); + | ^~~~~ +/build/libminc-2.4.05/libsrc2/volume.c: In function 'micreate_volume': +/build/libminc-2.4.05/libsrc2/volume.c:638:23: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 638 | hdf_size[i] = create_props->edge_lengths[i]; + | ^~~~~~~~~~~~ +In file included from /build/libminc-2.4.05/libcommon/minc2_error.h:38, + from /build/libminc-2.4.05/libsrc2/minc2.h:11, + from /build/libminc-2.4.05/libsrc2/volume.c:32: +/build/libminc-2.4.05/libsrc2/volume.c:668:72: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + 668 | MI_CHECK_HDF_CALL_RET(stat = H5Pset_deflate(hdf_plist, create_props->zlib_level),"H5Pset_deflate") + | ~~~~~~~~~~~~^~~~~~~~~~~~ +/build/libminc-2.4.05/libcommon/minc_error.h:189:46: note: in definition of macro 'MI_CHECK_HDF_CALL_RET' + 189 | #define MI_CHECK_HDF_CALL_RET(var,call) {if((var)<0) return MI_LOG_ERROR(MI2_MSG_HDF5,call);} + | ^~~ +/build/libminc-2.4.05/libsrc2/volume.c:900:70: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + 900 | handle->dim_handles = (midimhandle_t *)malloc(number_of_dimensions * + | ^ +/build/libminc-2.4.05/libsrc2/volume.c:904:63: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + 904 | return MI_LOG_ERROR(MI2_MSG_OUTOFMEM,number_of_dimensions * sizeof(midimhandle_t)); + | ^ +/build/libminc-2.4.05/libcommon/minc_error.h:187:75: note: in definition of macro 'MI_LOG_ERROR' + 187 | #define MI_LOG_ERROR(code,...) mi2log_message(__FILE__, __LINE__, code, ##__VA_ARGS__ ) + | ^~~~~~~~~~~ +/build/libminc-2.4.05/libsrc2/volume.c:992:73: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + 992 | props_handle->edge_lengths = (int *)malloc(create_props->max_lengths*sizeof(int)); + | ^ +/build/libminc-2.4.05/libsrc2/volume.c: In function '_miget_irregular_spacing': +/build/libminc-2.4.05/libsrc2/volume.c:1175:35: warning: conversion to 'long long unsigned int' from 'hssize_t' {aka 'long long int'} may change the sign of the result [-Wsign-conversion] + 1175 | hdim->offsets = malloc(n_points * sizeof(double)); + | ^ +/build/libminc-2.4.05/libsrc2/volume.c:1177:52: warning: conversion to 'long long unsigned int' from 'hssize_t' {aka 'long long int'} may change the sign of the result [-Wsign-conversion] + 1177 | return MI_LOG_ERROR(MI2_MSG_OUTOFMEM, n_points * sizeof(double)); + | ^ +/build/libminc-2.4.05/libcommon/minc_error.h:187:75: note: in definition of macro 'MI_LOG_ERROR' + 187 | #define MI_LOG_ERROR(code,...) mi2log_message(__FILE__, __LINE__, code, ##__VA_ARGS__ ) + | ^~~~~~~~~~~ +/build/libminc-2.4.05/libsrc2/volume.c:1199:34: warning: conversion to 'long long unsigned int' from 'hssize_t' {aka 'long long int'} may change the sign of the result [-Wsign-conversion] + 1199 | hdim->widths = malloc(n_points * sizeof(double)); + | ^ +/build/libminc-2.4.05/libsrc2/volume.c:1201:52: warning: conversion to 'long long unsigned int' from 'hssize_t' {aka 'long long int'} may change the sign of the result [-Wsign-conversion] + 1201 | return MI_LOG_ERROR(MI2_MSG_OUTOFMEM, n_points * sizeof(double)); + | ^ +/build/libminc-2.4.05/libcommon/minc_error.h:187:75: note: in definition of macro 'MI_LOG_ERROR' + 187 | #define MI_LOG_ERROR(code,...) mi2log_message(__FILE__, __LINE__, code, ##__VA_ARGS__ ) + | ^~~~~~~~~~~ +/build/libminc-2.4.05/libsrc2/volume.c: In function 'miopen_volume': +/build/libminc-2.4.05/libsrc2/volume.c:1425:62: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + 1425 | handle->dim_handles = (midimhandle_t *)malloc(n_dimensions * + | ^ +/build/libminc-2.4.05/libsrc2/volume.c:1430:56: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + 1430 | return MI_LOG_ERROR(MI2_MSG_OUTOFMEM, n_dimensions * sizeof(midimhandle_t)); + | ^ +/build/libminc-2.4.05/libcommon/minc_error.h:187:75: note: in definition of macro 'MI_LOG_ERROR' + 187 | #define MI_LOG_ERROR(code,...) mi2log_message(__FILE__, __LINE__, code, ##__VA_ARGS__ ) + | ^~~~~~~~~~~ +[ 19%] Building C object CMakeFiles/minc2.dir/libcommon/minc_config.c.o +/build/libminc-2.4.05/libsrc2/volume.c:1513:59: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + 1513 | hid_t tmp_id = H5Tget_member_type(handle->ftype_id, i); + | ^ +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/libcommon/minc_config.c.o -MF CMakeFiles/minc2.dir/libcommon/minc_config.c.o.d -o CMakeFiles/minc2.dir/libcommon/minc_config.c.o -c /build/libminc-2.4.05/libcommon/minc_config.c +/build/libminc-2.4.05/libsrc2/volume.c:1514:63: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + 1514 | size_t tmp_off = H5Tget_member_offset(handle->ftype_id, i); + | ^ +/build/libminc-2.4.05/libsrc2/volume.c:1515:59: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + 1515 | char *tmp_nm = H5Tget_member_name(handle->ftype_id, i); + | ^ +[ 19%] Building C object CMakeFiles/minc2_static.dir/libsrc/hdf_convenience.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/libsrc/hdf_convenience.c.o -MF CMakeFiles/minc2_static.dir/libsrc/hdf_convenience.c.o.d -o CMakeFiles/minc2_static.dir/libsrc/hdf_convenience.c.o -c /build/libminc-2.4.05/libsrc/hdf_convenience.c +[ 20%] Building C object CMakeFiles/minc2_static.dir/libsrc/minc_compat.c.o +[ 20%] Building C object CMakeFiles/minc2.dir/libcommon/minc_error.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/libcommon/minc_error.c.o -MF CMakeFiles/minc2.dir/libcommon/minc_error.c.o.d -o CMakeFiles/minc2.dir/libcommon/minc_error.c.o -c /build/libminc-2.4.05/libcommon/minc_error.c +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/libsrc/minc_compat.c.o -MF CMakeFiles/minc2_static.dir/libsrc/minc_compat.c.o.d -o CMakeFiles/minc2_static.dir/libsrc/minc_compat.c.o -c /build/libminc-2.4.05/libsrc/minc_compat.c +/build/libminc-2.4.05/libcommon/minc_config.c: In function 'miread_cfg': +/build/libminc-2.4.05/libcommon/minc_config.c:87:42: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 87 | strncpy(buffer, tmp, maxlen); + | ^~~~~~ /build/libminc-2.4.05/libsrc/voxel_loop.c: In function 'get_loop_dim_size': /build/libminc-2.4.05/libsrc/voxel_loop.c:467:14: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 467 | return dim_length; @@ -2420,6 +2077,14 @@ /build/libminc-2.4.05/libsrc/voxel_loop.c:1803:10: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 1803 | get_vector_length(get_output_mincid(loopfile_info, 0), NULL); | ^~~~~~~~~~~~~~~~~ +[ 21%] Building C object CMakeFiles/minc2.dir/libcommon/ParseArgv.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/libcommon/ParseArgv.c.o -MF CMakeFiles/minc2.dir/libcommon/ParseArgv.c.o.d -o CMakeFiles/minc2.dir/libcommon/ParseArgv.c.o -c /build/libminc-2.4.05/libcommon/ParseArgv.c +[ 21%] Building C object CMakeFiles/minc2_static.dir/libsrc/minc_simple.c.o +[ 21%] Building C object CMakeFiles/minc2.dir/libcommon/read_file_names.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/libcommon/read_file_names.c.o -MF CMakeFiles/minc2.dir/libcommon/read_file_names.c.o.d -o CMakeFiles/minc2.dir/libcommon/read_file_names.c.o -c /build/libminc-2.4.05/libcommon/read_file_names.c +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/libsrc/minc_simple.c.o -MF CMakeFiles/minc2_static.dir/libsrc/minc_simple.c.o.d -o CMakeFiles/minc2_static.dir/libsrc/minc_simple.c.o -c /build/libminc-2.4.05/libsrc/minc_simple.c +[ 22%] Building C object CMakeFiles/minc2_static.dir/libsrc/minc_format_convert.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/libsrc/minc_format_convert.c.o -MF CMakeFiles/minc2_static.dir/libsrc/minc_format_convert.c.o.d -o CMakeFiles/minc2_static.dir/libsrc/minc_format_convert.c.o -c /build/libminc-2.4.05/libsrc/minc_format_convert.c /build/libminc-2.4.05/libsrc/hdf_convenience.c: In function 'hdf_var_add': /build/libminc-2.4.05/libsrc/hdf_convenience.c:205:59: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 205 | new->dims = (hsize_t *) malloc(sizeof (hsize_t) * ndims); @@ -2432,6 +2097,13 @@ /build/libminc-2.4.05/libcommon/minc_error.h:187:75: note: in definition of macro 'MI_LOG_ERROR' 187 | #define MI_LOG_ERROR(code,...) mi2log_message(__FILE__, __LINE__, code, ##__VA_ARGS__ ) | ^~~~~~~~~~~ +/build/libminc-2.4.05/libcommon/read_file_names.c: In function 'read_file_names': +/build/libminc-2.4.05/libcommon/read_file_names.c:53:34: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + 53 | files = malloc(sizeof(*files) * array_size); + | ^ +/build/libminc-2.4.05/libcommon/read_file_names.c:76:48: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + 76 | files = realloc(files, sizeof(*files) * array_size); + | ^ /build/libminc-2.4.05/libsrc/hdf_convenience.c: In function 'hdf_size': /build/libminc-2.4.05/libsrc/hdf_convenience.c:373:20: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 373 | int typ_size = H5Tget_size(typ_id); @@ -2468,8 +2140,6 @@ /build/libminc-2.4.05/libsrc/hdf_convenience.c:1188:33: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 1188 | hsize_t temp_size = val_len; | ^~~~~~~ -/build/libminc-2.4.05/libsrc/minc_compat.c: In function 'MI2attcopy': -[ 24%] Building C object CMakeFiles/minc2.dir/libsrc/value_conversion.c.o /build/libminc-2.4.05/libsrc/hdf_convenience.c: In function 'hdf_vardef': /build/libminc-2.4.05/libsrc/hdf_convenience.c:1325:19: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'long int' may change the sign of the result [-Wsign-conversion] 1325 | dims[i] = length; @@ -2490,7 +2160,6 @@ /build/libminc-2.4.05/libsrc/minc_useful.h:123:47: note: in definition of macro 'MIN' 123 | #define MIN( x, y ) ( ((x) <= (y)) ? (x) : (y) ) | ^ -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/libsrc/value_conversion.c.o -MF CMakeFiles/minc2.dir/libsrc/value_conversion.c.o.d -o CMakeFiles/minc2.dir/libsrc/value_conversion.c.o -c /build/libminc-2.4.05/libsrc/value_conversion.c /build/libminc-2.4.05/libsrc/hdf_convenience.c:1384:38: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 1384 | chkdims[i] = chunk_length; | ^~~~~~~~~~~~ @@ -2500,14 +2169,10 @@ /build/libminc-2.4.05/libsrc/hdf_convenience.c:1421:42: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] 1421 | hdf_set_length(dst_id, varnm, dim->length); | ~~~^~~~~~~~ -[ 24%] Building C object CMakeFiles/minc2_static.dir/libsrc/minc_simple.c.o /build/libminc-2.4.05/libsrc/hdf_convenience.c: In function 'hdf_varget': /build/libminc-2.4.05/libsrc/hdf_convenience.c:1537:19: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'long int' may change the sign of the result [-Wsign-conversion] 1537 | fstart[i] = start_ptr[i]; | ^~~~~~~~~ -/build/libminc-2.4.05/libsrc/minc_compat.c:307:51: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 307 | val_ptr = malloc(MI2typelen(att_type) * att_length); - | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /build/libminc-2.4.05/libsrc/hdf_convenience.c:1538:18: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'long int' may change the sign of the result [-Wsign-conversion] 1538 | count[i] = length_ptr[i]; | ^~~~~~~~~~ @@ -2521,7 +2186,6 @@ /build/libminc-2.4.05/libsrc/hdf_convenience.c:1661:29: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'long int' may change the sign of the result [-Wsign-conversion] 1661 | myedges[idim] = edges[idim]; | ^~~~~ -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/libsrc/minc_simple.c.o -MF CMakeFiles/minc2_static.dir/libsrc/minc_simple.c.o.d -o CMakeFiles/minc2_static.dir/libsrc/minc_simple.c.o -c /build/libminc-2.4.05/libsrc/minc_simple.c /build/libminc-2.4.05/libsrc/hdf_convenience.c:1685:36: warning: conversion to 'long long unsigned int' from 'ptrdiff_t' {aka 'long int'} may change the sign of the result [-Wsign-conversion] 1685 | length[idim] = mymap[idim] * myedges[idim]; | ^ @@ -2535,6 +2199,10 @@ 1745 | mystart[idim] = start[idim]; | ^~~~~ /build/libminc-2.4.05/libsrc/hdf_convenience.c: In function 'hdf_vargetg': +/build/libminc-2.4.05/libsrc/minc_compat.c: In function 'MI2attcopy': +/build/libminc-2.4.05/libsrc/minc_compat.c:307:51: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 307 | val_ptr = malloc(MI2typelen(att_type) * att_length); + | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /build/libminc-2.4.05/libsrc/hdf_convenience.c:1813:42: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 1813 | mystart = (long *)calloc(varp->ndims * 7, sizeof(long)); | ~~~~~~~~~~~~^~~ @@ -2566,7 +2234,6 @@ /build/libminc-2.4.05/libsrc/hdf_convenience.c:2245:33: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 2245 | file_id = H5Fopen(path, mode, fpid); | ^~~~ -[ 25%] Building C object CMakeFiles/minc2.dir/libsrc/voxel_loop.c.o /build/libminc-2.4.05/libsrc/hdf_convenience.c:2255:25: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 2255 | file->wr_ok = (mode & H5F_ACC_RDWR) != 0; | ^ @@ -2580,11 +2247,288 @@ /build/libminc-2.4.05/libsrc/hdf_convenience.c:2351:35: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 2351 | file_id = H5Fcreate(path, cmode, H5P_DEFAULT, fpid); | ^~~~~ -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/libsrc/voxel_loop.c.o -MF CMakeFiles/minc2.dir/libsrc/voxel_loop.c.o.d -o CMakeFiles/minc2.dir/libsrc/voxel_loop.c.o -c /build/libminc-2.4.05/libsrc/voxel_loop.c -[ 25%] Building C object CMakeFiles/minc2.dir/libsrc/hdf_convenience.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/libsrc/hdf_convenience.c.o -MF CMakeFiles/minc2.dir/libsrc/hdf_convenience.c.o.d -o CMakeFiles/minc2.dir/libsrc/hdf_convenience.c.o -c /build/libminc-2.4.05/libsrc/hdf_convenience.c -[ 26%] Building C object CMakeFiles/minc2_static.dir/libsrc/minc_format_convert.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/libsrc/minc_format_convert.c.o -MF CMakeFiles/minc2_static.dir/libsrc/minc_format_convert.c.o.d -o CMakeFiles/minc2_static.dir/libsrc/minc_format_convert.c.o -c /build/libminc-2.4.05/libsrc/minc_format_convert.c +[ 22%] Building C object CMakeFiles/minc2.dir/libcommon/restructure.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/libcommon/restructure.c.o -MF CMakeFiles/minc2.dir/libcommon/restructure.c.o.d -o CMakeFiles/minc2.dir/libcommon/restructure.c.o -c /build/libminc-2.4.05/libcommon/restructure.c +/build/libminc-2.4.05/libcommon/ParseArgv.c: In function 'ParseArgv': +/build/libminc-2.4.05/libcommon/ParseArgv.c:232:36: warning: conversion from 'long int' to 'int' may change value [-Wconversion] + 232 | *((int *) infoPtr->dst) = (intptr_t) infoPtr->src; + | ^ +/build/libminc-2.4.05/libcommon/ParseArgv.c:244:19: warning: conversion from 'long int' to 'int' may change value [-Wconversion] + 244 | ParseLong(argv[srcIndex], &endPtr); + | ^~~~~~~~~ +/build/libminc-2.4.05/libcommon/ParseArgv.c: In function 'PrintUsage': +/build/libminc-2.4.05/libcommon/ParseArgv.c:439:32: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 439 | numSpaces = width + 1 - strlen(infoPtr->key); + | ^ +/build/libminc-2.4.05/libcommon/ParseArgv.c:439:22: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + 439 | numSpaces = width + 1 - strlen(infoPtr->key); + | ^~~~~ +[ 23%] Building C object CMakeFiles/minc2.dir/libcommon/time_stamp.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/libcommon/time_stamp.c.o -MF CMakeFiles/minc2.dir/libcommon/time_stamp.c.o.d -o CMakeFiles/minc2.dir/libcommon/time_stamp.c.o -c /build/libminc-2.4.05/libcommon/time_stamp.c +/build/libminc-2.4.05/libcommon/restructure.c: In function 'restructure_array': +/build/libminc-2.4.05/libcommon/restructure.c:137:21: warning: unsigned conversion from 'int' to 'size_t' {aka 'long unsigned int'} changes value from '-1' to '18446744073709551615' [-Wsign-conversion] + 137 | offset_next = -1; /* Initialize. */ + | ^ +/build/libminc-2.4.05/libsrc/minc_simple.c: In function 'minc_load_data': +/build/libminc-2.4.05/libsrc/minc_simple.c:393:27: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'long int' may change the sign of the result [-Wsign-conversion] + 393 | ucount[j++] = dim_len[i]; + | ^~~~~~~ +/build/libminc-2.4.05/libsrc/minc_simple.c:397:23: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 397 | restructure_array(var_ndims, dataptr, ucount, nctypelen(nctype), + | ^~~~~~~~~ +In file included from /build/libminc-2.4.05/libsrc/minc.h:172, + from /build/libminc-2.4.05/libsrc/minc_private.h:83, + from /build/libminc-2.4.05/libsrc/minc_simple.c:38: +/build/libminc-2.4.05/libsrc/minc_compat.h:67:19: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 67 | #define nctypelen MI2typelen +/build/libminc-2.4.05/libsrc/minc_simple.c:397:51: note: in expansion of macro 'nctypelen' + 397 | restructure_array(var_ndims, dataptr, ucount, nctypelen(nctype), + | ^~~~~~~~~ +/build/libminc-2.4.05/libsrc/minc_simple.c:416:77: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + 416 | p_file->file_atts = (struct att_info *) malloc(sizeof (struct att_info) * + | ^ +/build/libminc-2.4.05/libsrc/minc_simple.c:419:77: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + 419 | p_file->file_vars = (struct var_info *) malloc(sizeof (struct var_info) * + | ^ +/build/libminc-2.4.05/libsrc/minc_simple.c:431:48: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 431 | p_att->att_val = malloc(p_att->att_len * nctypelen(p_att->att_type)); + | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/libminc-2.4.05/libsrc/minc_simple.c:446:51: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + 446 | p_var->var_atts = malloc(p_var->var_natts * + | ^ +/build/libminc-2.4.05/libsrc/minc_simple.c:462:52: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 462 | p_att->att_val = malloc(p_att->att_len * nctypelen(p_att->att_type)); + | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/libminc-2.4.05/libsrc/minc_simple.c: In function 'minc_transform_to_world': +/build/libminc-2.4.05/libsrc/minc_simple.c:1026:14: warning: conversion from 'long int' to 'double' may change value [-Wconversion] + 1026 | input[0] = voxel[spatial_axes[0]]; + | ^~~~~ +/build/libminc-2.4.05/libsrc/minc_simple.c:1027:14: warning: conversion from 'long int' to 'double' may change value [-Wconversion] + 1027 | input[1] = voxel[spatial_axes[1]]; + | ^~~~~ +/build/libminc-2.4.05/libsrc/minc_simple.c:1028:14: warning: conversion from 'long int' to 'double' may change value [-Wconversion] + 1028 | input[2] = voxel[spatial_axes[2]]; + | ^~~~~ +[ 23%] Building C object CMakeFiles/minc2_static.dir/volume_io/Geometry/colour.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/Geometry/colour.c.o -MF CMakeFiles/minc2_static.dir/volume_io/Geometry/colour.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/Geometry/colour.c.o -c /build/libminc-2.4.05/volume_io/Geometry/colour.c +[ 24%] Building C object CMakeFiles/minc2_static.dir/volume_io/Geometry/colour_def.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/Geometry/colour_def.c.o -MF CMakeFiles/minc2_static.dir/volume_io/Geometry/colour_def.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/Geometry/colour_def.c.o -c /build/libminc-2.4.05/volume_io/Geometry/colour_def.c +[ 24%] Building C object CMakeFiles/minc2_static.dir/volume_io/Geometry/gaussian.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/Geometry/gaussian.c.o -MF CMakeFiles/minc2_static.dir/volume_io/Geometry/gaussian.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/Geometry/gaussian.c.o -c /build/libminc-2.4.05/volume_io/Geometry/gaussian.c +[ 25%] Building C object CMakeFiles/minc2_static.dir/volume_io/Geometry/inverse.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/Geometry/inverse.c.o -MF CMakeFiles/minc2_static.dir/volume_io/Geometry/inverse.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/Geometry/inverse.c.o -c /build/libminc-2.4.05/volume_io/Geometry/inverse.c +[ 25%] Building C object CMakeFiles/minc2.dir/libsrc/dim_conversion.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/libsrc/dim_conversion.c.o -MF CMakeFiles/minc2.dir/libsrc/dim_conversion.c.o.d -o CMakeFiles/minc2.dir/libsrc/dim_conversion.c.o -c /build/libminc-2.4.05/libsrc/dim_conversion.c +[ 26%] Building C object CMakeFiles/minc2.dir/libsrc/image_conversion.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/libsrc/image_conversion.c.o -MF CMakeFiles/minc2.dir/libsrc/image_conversion.c.o.d -o CMakeFiles/minc2.dir/libsrc/image_conversion.c.o -c /build/libminc-2.4.05/libsrc/image_conversion.c +[ 26%] Building C object CMakeFiles/minc2_static.dir/volume_io/Geometry/newton.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/Geometry/newton.c.o -MF CMakeFiles/minc2_static.dir/volume_io/Geometry/newton.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/Geometry/newton.c.o -c /build/libminc-2.4.05/volume_io/Geometry/newton.c +[ 26%] Building C object CMakeFiles/minc2.dir/libsrc/minc_convenience.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/libsrc/minc_convenience.c.o -MF CMakeFiles/minc2.dir/libsrc/minc_convenience.c.o.d -o CMakeFiles/minc2.dir/libsrc/minc_convenience.c.o -c /build/libminc-2.4.05/libsrc/minc_convenience.c +[ 27%] Building C object CMakeFiles/minc2.dir/libsrc/nd_loop.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/libsrc/nd_loop.c.o -MF CMakeFiles/minc2.dir/libsrc/nd_loop.c.o.d -o CMakeFiles/minc2.dir/libsrc/nd_loop.c.o -c /build/libminc-2.4.05/libsrc/nd_loop.c +In file included from /build/libminc-2.4.05/libsrc2/volume.c:33: +In function '_miget_file_dimension', + inlined from 'miopen_volume' at /build/libminc-2.4.05/libsrc2/volume.c:1449:5: +/build/libminc-2.4.05/libsrc2/minc2_private.h:14:22: warning: '%s' directive writing up to 127 bytes into a region of size 107 [-Wformat-overflow=] + 14 | #define MI_ROOT_PATH "/minc-2.0" + | ^~~~~~~~~~~ +/build/libminc-2.4.05/libsrc2/volume.c:1220:17: note: in expansion of macro 'MI_ROOT_PATH' + 1220 | sprintf(path, MI_ROOT_PATH "/dimensions/%s", dimname); + | ^~~~~~~~~~~~ +/build/libminc-2.4.05/libsrc2/volume.c: In function 'miopen_volume': +/build/libminc-2.4.05/libsrc2/volume.c:1753:53: note: format string is defined here + 1753 | miset_attribute(volume, MI_ROOT_PATH "/image/0/image", "valid_range", + | ^~ +In file included from /usr/include/stdio.h:906, + from /usr/include/hdf5/serial/H5Epublic.h:20, + from /usr/include/hdf5/serial/hdf5.h:26, + from /build/libminc-2.4.05/libsrc2/volume.c:8: +In function 'sprintf', + inlined from '_miget_file_dimension' at /build/libminc-2.4.05/libsrc2/volume.c:1220:3, + inlined from 'miopen_volume' at /build/libminc-2.4.05/libsrc2/volume.c:1449:5: +/usr/include/x86_64-linux-gnu/bits/stdio2.h:30:10: note: '__builtin___sprintf_chk' output between 22 and 149 bytes into a destination of size 128 + 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 31 | __glibc_objsize (__s), __fmt, + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 32 | __va_arg_pack ()); + | ~~~~~~~~~~~~~~~~~ +[ 27%] Building C object CMakeFiles/minc2.dir/libsrc/netcdf_convenience.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/libsrc/netcdf_convenience.c.o -MF CMakeFiles/minc2.dir/libsrc/netcdf_convenience.c.o.d -o CMakeFiles/minc2.dir/libsrc/netcdf_convenience.c.o -c /build/libminc-2.4.05/libsrc/netcdf_convenience.c +/build/libminc-2.4.05/libsrc/image_conversion.c: In function 'miicv_setdbl': +/build/libminc-2.4.05/libsrc/image_conversion.c:399:29: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] + 399 | icvp->user_do_range = value; + | ^~~~~ +/build/libminc-2.4.05/libsrc/image_conversion.c:408:28: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] + 408 | icvp->user_do_norm = value; + | ^~~~~ +/build/libminc-2.4.05/libsrc/image_conversion.c:411:30: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] + 411 | icvp->user_user_norm = value; + | ^~~~~ +/build/libminc-2.4.05/libsrc/image_conversion.c:420:33: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] + 420 | icvp->user_do_fillvalue = value; + | ^~~~~ +/build/libminc-2.4.05/libsrc/image_conversion.c:426:31: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] + 426 | icvp->user_do_dimconv = value; + | ^~~~~ +/build/libminc-2.4.05/libsrc/image_conversion.c:429:30: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] + 429 | icvp->user_do_scalar = value; + | ^~~~~ +/build/libminc-2.4.05/libsrc/image_conversion.c:432:14: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] + 432 | ival = value; + | ^~~~~ +/build/libminc-2.4.05/libsrc/image_conversion.c:437:14: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] + 437 | ival = value; + | ^~~~~ +/build/libminc-2.4.05/libsrc/image_conversion.c:442:14: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] + 442 | ival = value; + | ^~~~~ +/build/libminc-2.4.05/libsrc/image_conversion.c:447:14: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] + 447 | ival = value; + | ^~~~~ +/build/libminc-2.4.05/libsrc/image_conversion.c:455:32: warning: conversion from 'double' to 'long int' may change value [-Wfloat-conversion] + 455 | icvp->user_dim_size[0] = value; + | ^~~~~ +/build/libminc-2.4.05/libsrc/image_conversion.c:458:32: warning: conversion from 'double' to 'long int' may change value [-Wfloat-conversion] + 458 | icvp->user_dim_size[1] = value; + | ^~~~~ +/build/libminc-2.4.05/libsrc/image_conversion.c:461:32: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] + 461 | icvp->user_keep_aspect = value; + | ^~~~~ +/build/libminc-2.4.05/libsrc/image_conversion.c:475:38: warning: conversion from 'double' to 'long int' may change value [-Wfloat-conversion] + 475 | icvp->user_dim_size[idim] = value; + | ^~~~~ +/build/libminc-2.4.05/libsrc/image_conversion.c: In function 'miicv_inqdbl': +/build/libminc-2.4.05/libsrc/image_conversion.c:703:16: warning: conversion from 'long int' to 'double' may change value [-Wconversion] + 703 | *value = icvp->user_dim_size[0]; break; + | ^~~~ +/build/libminc-2.4.05/libsrc/image_conversion.c:705:16: warning: conversion from 'long int' to 'double' may change value [-Wconversion] + 705 | *value = icvp->user_dim_size[1]; break; + | ^~~~ +/build/libminc-2.4.05/libsrc/image_conversion.c:728:19: warning: conversion from 'long int' to 'double' may change value [-Wconversion] + 728 | *value = icvp->user_dim_size[idim]; + | ^~~~ +/build/libminc-2.4.05/libsrc/image_conversion.c: In function 'miicv_inqint': +/build/libminc-2.4.05/libsrc/image_conversion.c:774:13: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] + 774 | *value = dvalue; + | ^~~~~~ +/build/libminc-2.4.05/libsrc/image_conversion.c: In function 'miicv_inqlong': +/build/libminc-2.4.05/libsrc/image_conversion.c:803:13: warning: conversion from 'double' to 'long int' may change value [-Wfloat-conversion] + 803 | *value = dvalue; + | ^~~~~~ +In file included from /build/libminc-2.4.05/libsrc/minc_private.h:84, + from /build/libminc-2.4.05/libsrc/image_conversion.c:173: +/build/libminc-2.4.05/libsrc/image_conversion.c: In function 'MI_icv_zero_buffer': +/build/libminc-2.4.05/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'unsigned char' may change value [-Wfloat-conversion] + 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) + | ^ +/build/libminc-2.4.05/libsrc/minc_basic.h:161:37: note: in expansion of macro 'ROUND' + 161 | *((unsigned char *) ptr) = ROUND(dvalue); \ + | ^~~~~ +/build/libminc-2.4.05/libsrc/image_conversion.c:1490:5: note: in expansion of macro 'MI_FROM_DOUBLE' + 1490 | {MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)} + | ^~~~~~~~~~~~~~ +/build/libminc-2.4.05/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'signed char' may change value [-Wfloat-conversion] + 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) + | ^ +/build/libminc-2.4.05/libsrc/minc_basic.h:166:35: note: in expansion of macro 'ROUND' + 166 | *((signed char *) ptr) = ROUND(dvalue); \ + | ^~~~~ +/build/libminc-2.4.05/libsrc/image_conversion.c:1490:5: note: in expansion of macro 'MI_FROM_DOUBLE' + 1490 | {MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)} + | ^~~~~~~~~~~~~~ +/build/libminc-2.4.05/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'short unsigned int' may change value [-Wfloat-conversion] + 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) + | ^ +/build/libminc-2.4.05/libsrc/minc_basic.h:175:38: note: in expansion of macro 'ROUND' + 175 | *((unsigned short *) ptr) = ROUND(dvalue); \ + | ^~~~~ +/build/libminc-2.4.05/libsrc/image_conversion.c:1490:5: note: in expansion of macro 'MI_FROM_DOUBLE' + 1490 | {MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)} + | ^~~~~~~~~~~~~~ +/build/libminc-2.4.05/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'short int' may change value [-Wfloat-conversion] + 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) + | ^ +/build/libminc-2.4.05/libsrc/minc_basic.h:180:36: note: in expansion of macro 'ROUND' + 180 | *((signed short *) ptr) = ROUND(dvalue); \ + | ^~~~~ +/build/libminc-2.4.05/libsrc/image_conversion.c:1490:5: note: in expansion of macro 'MI_FROM_DOUBLE' + 1490 | {MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)} + | ^~~~~~~~~~~~~~ +/build/libminc-2.4.05/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'unsigned int' may change value [-Wfloat-conversion] + 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) + | ^ +/build/libminc-2.4.05/libsrc/minc_basic.h:189:36: note: in expansion of macro 'ROUND' + 189 | *((unsigned int *) ptr) = ROUND(dvalue); \ + | ^~~~~ +/build/libminc-2.4.05/libsrc/image_conversion.c:1490:5: note: in expansion of macro 'MI_FROM_DOUBLE' + 1490 | {MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)} + | ^~~~~~~~~~~~~~ +/build/libminc-2.4.05/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] + 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) + | ^ +/build/libminc-2.4.05/libsrc/minc_basic.h:194:34: note: in expansion of macro 'ROUND' + 194 | *((signed int *) ptr) = ROUND(dvalue); \ + | ^~~~~ +/build/libminc-2.4.05/libsrc/image_conversion.c:1490:5: note: in expansion of macro 'MI_FROM_DOUBLE' + 1490 | {MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)} + | ^~~~~~~~~~~~~~ +/build/libminc-2.4.05/libsrc/minc_useful.h:123:23: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] + 123 | #define MIN( x, y ) ( ((x) <= (y)) ? (x) : (y) ) + | ^ +/build/libminc-2.4.05/libsrc/minc_basic.h:200:26: note: in expansion of macro 'MIN' + 200 | *((float *) ptr) = MIN(FLT_MAX,dvalue); \ + | ^~~ +/build/libminc-2.4.05/libsrc/image_conversion.c:1490:5: note: in expansion of macro 'MI_FROM_DOUBLE' + 1490 | {MI_FROM_DOUBLE(zeroval, icvp->user_type, icvp->user_sign, zerostart)} + | ^~~~~~~~~~~~~~ +[ 27%] Building C object CMakeFiles/minc2_static.dir/volume_io/Geometry/points.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/Geometry/points.c.o -MF CMakeFiles/minc2_static.dir/volume_io/Geometry/points.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/Geometry/points.c.o -c /build/libminc-2.4.05/volume_io/Geometry/points.c +/build/libminc-2.4.05/libsrc/minc_convenience.c: In function 'miset_valid_range': +/build/libminc-2.4.05/libsrc/minc_convenience.c:430:17: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] + 430 | fval[0] = valid_range[0]; + | ^~~~~~~~~~~ +/build/libminc-2.4.05/libsrc/minc_convenience.c:431:17: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] + 431 | fval[1] = valid_range[1]; + | ^~~~~~~~~~~ +/build/libminc-2.4.05/libsrc/minc_convenience.c: In function 'miattput_pointer': +/build/libminc-2.4.05/libsrc/minc_convenience.c:638:10: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + 638 | index=strlen(strcpy(pointer_string,MI_VARATT_POINTER_PREFIX)); + | ^~~~~~ +In file included from /build/libminc-2.4.05/libsrc/minc_private.h:84, + from /build/libminc-2.4.05/libsrc/minc_convenience.c:152: +/build/libminc-2.4.05/libsrc/minc_convenience.c: In function 'miadd_child': +/build/libminc-2.4.05/libsrc/minc_convenience.c:743:56: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 743 | if ((child_list = MALLOC(child_list_size+MAX_NC_NAME+ + | ^ +/build/libminc-2.4.05/libsrc/minc_useful.h:138:39: note: in definition of macro 'MALLOC' + 138 | ( (type *) malloc( (size_t) (n_items) * sizeof(type) ) ) + | ^~~~~~~ +In file included from /build/libminc-2.4.05/libsrc/minc_private.h:89: +/build/libminc-2.4.05/libsrc/minc_convenience.c:746:49: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 746 | child_list_size+MAX_NC_NAME+strlen(MI_CHILD_SEPARATOR)); + | ^ +/build/libminc-2.4.05/libcommon/minc_error.h:187:75: note: in definition of macro 'MI_LOG_ERROR' + 187 | #define MI_LOG_ERROR(code,...) mi2log_message(__FILE__, __LINE__, code, ##__VA_ARGS__ ) + | ^~~~~~~~~~~ +/build/libminc-2.4.05/libsrc/minc_convenience.c:765:23: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 765 | child_list_size += strlen(MI_CHILD_SEPARATOR); + | ^~ +/build/libminc-2.4.05/libsrc/minc_convenience.c:780:23: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 780 | child_list_size -= strlen(MI_CHILD_SEPARATOR); + | ^~ +/build/libminc-2.4.05/libsrc/minc_convenience.c:780:26: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + 780 | child_list_size -= strlen(MI_CHILD_SEPARATOR); + | ^~~~~~ +/build/libminc-2.4.05/libsrc/minc_convenience.c: In function 'miappend_history': +/build/libminc-2.4.05/libsrc/minc_convenience.c:1378:30: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 1378 | att_val = malloc(att_len + strlen(tm_stamp) + 2); + | ^ +[ 28%] Building C object CMakeFiles/minc2_static.dir/volume_io/Geometry/splines.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/Geometry/splines.c.o -MF CMakeFiles/minc2_static.dir/volume_io/Geometry/splines.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/Geometry/splines.c.o -c /build/libminc-2.4.05/volume_io/Geometry/splines.c +[ 28%] Building C object CMakeFiles/minc2_static.dir/volume_io/Geometry/tensors.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/Geometry/tensors.c.o -MF CMakeFiles/minc2_static.dir/volume_io/Geometry/tensors.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/Geometry/tensors.c.o -c /build/libminc-2.4.05/volume_io/Geometry/tensors.c In file included from /build/libminc-2.4.05/libsrc/minc_private.h:84, from /build/libminc-2.4.05/libsrc/netcdf_convenience.c:182: /build/libminc-2.4.05/libsrc/netcdf_convenience.c: In function 'miexpand_file': @@ -2598,6 +2542,165 @@ /build/libminc-2.4.05/libsrc/netcdf_convenience.c:1033:38: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 1033 | strlen(value) + 1, value); | ~~~~~~~~~~~~~~^~~ +[ 28%] Building C object CMakeFiles/minc2.dir/libsrc/value_conversion.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/libsrc/value_conversion.c.o -MF CMakeFiles/minc2.dir/libsrc/value_conversion.c.o.d -o CMakeFiles/minc2.dir/libsrc/value_conversion.c.o -c /build/libminc-2.4.05/libsrc/value_conversion.c +/build/libminc-2.4.05/libsrc/dim_conversion.c: In function 'MI_get_dim_scale': +/build/libminc-2.4.05/libsrc/dim_conversion.c:388:16: warning: conversion from 'long int' to 'int' may change value [-Wconversion] + 388 | icvp->user_dim_size[idim] / icvp->var_dim_size[idim]; + | ^~~~ +/build/libminc-2.4.05/libsrc/dim_conversion.c:395:42: warning: conversion from 'long int' to 'int' may change value [-Wconversion] + 395 | icvp->derv_dim_scale[idim] = 1 + + | ^ +/build/libminc-2.4.05/libsrc/dim_conversion.c:446:13: warning: conversion from 'long int' to 'int' may change value [-Wconversion] + 446 | ( user_dim_size - + | ^ +/build/libminc-2.4.05/libsrc/dim_conversion.c:455:13: warning: conversion from 'long int' to 'int' may change value [-Wconversion] + 455 | ( user_dim_size - 1 - + | ^ +/build/libminc-2.4.05/libsrc/dim_conversion.c:479:30: warning: conversion from 'long int' to 'double' may change value [-Wconversion] + 479 | dimstart -= dimstep * (icvp->var_dim_size[idim]-1); + | ^ +/build/libminc-2.4.05/libsrc/dim_conversion.c: In function 'MI_get_dim_bufsize_step': +/build/libminc-2.4.05/libsrc/dim_conversion.c:518:52: warning: conversion from 'long int' to 'int' may change value [-Wconversion] + 518 | icvp->derv_bufsize_step[icvp->var_ndims-1] = icvp->var_vector_size; + | ^~~~ +In file included from /build/libminc-2.4.05/libsrc/minc_private.h:84, + from /build/libminc-2.4.05/libsrc/dim_conversion.c:93: +/build/libminc-2.4.05/libsrc/dim_conversion.c: In function 'MI_icv_dimconvert': +[ 29%] Building C object CMakeFiles/minc2.dir/libsrc/voxel_loop.c.o +/build/libminc-2.4.05/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'unsigned char' may change value [-Wfloat-conversion] + 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) + | ^ +/build/libminc-2.4.05/libsrc/minc_basic.h:161:37: note: in expansion of macro 'ROUND' + 161 | *((unsigned char *) ptr) = ROUND(dvalue); \ + | ^~~~~ +/build/libminc-2.4.05/libsrc/dim_conversion.c:726:11: note: in expansion of macro 'MI_FROM_DOUBLE' + 726 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, optr)} + | ^~~~~~~~~~~~~~ +/build/libminc-2.4.05/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'signed char' may change value [-Wfloat-conversion] + 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) + | ^ +/build/libminc-2.4.05/libsrc/minc_basic.h:166:35: note: in expansion of macro 'ROUND' + 166 | *((signed char *) ptr) = ROUND(dvalue); \ + | ^~~~~ +/build/libminc-2.4.05/libsrc/dim_conversion.c:726:11: note: in expansion of macro 'MI_FROM_DOUBLE' + 726 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, optr)} + | ^~~~~~~~~~~~~~ +/build/libminc-2.4.05/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'short unsigned int' may change value [-Wfloat-conversion] + 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) + | ^ +/build/libminc-2.4.05/libsrc/minc_basic.h:175:38: note: in expansion of macro 'ROUND' + 175 | *((unsigned short *) ptr) = ROUND(dvalue); \ + | ^~~~~ +/build/libminc-2.4.05/libsrc/dim_conversion.c:726:11: note: in expansion of macro 'MI_FROM_DOUBLE' + 726 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, optr)} + | ^~~~~~~~~~~~~~ +/build/libminc-2.4.05/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'short int' may change value [-Wfloat-conversion] + 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) + | ^ +/build/libminc-2.4.05/libsrc/minc_basic.h:180:36: note: in expansion of macro 'ROUND' + 180 | *((signed short *) ptr) = ROUND(dvalue); \ + | ^~~~~ +/build/libminc-2.4.05/libsrc/dim_conversion.c:726:11: note: in expansion of macro 'MI_FROM_DOUBLE' + 726 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, optr)} + | ^~~~~~~~~~~~~~ +/build/libminc-2.4.05/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'unsigned int' may change value [-Wfloat-conversion] + 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) + | ^ +/build/libminc-2.4.05/libsrc/minc_basic.h:189:36: note: in expansion of macro 'ROUND' + 189 | *((unsigned int *) ptr) = ROUND(dvalue); \ + | ^~~~~ +/build/libminc-2.4.05/libsrc/dim_conversion.c:726:11: note: in expansion of macro 'MI_FROM_DOUBLE' + 726 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, optr)} + | ^~~~~~~~~~~~~~ +/build/libminc-2.4.05/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] + 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) + | ^ +/build/libminc-2.4.05/libsrc/minc_basic.h:194:34: note: in expansion of macro 'ROUND' + 194 | *((signed int *) ptr) = ROUND(dvalue); \ + | ^~~~~ +/build/libminc-2.4.05/libsrc/dim_conversion.c:726:11: note: in expansion of macro 'MI_FROM_DOUBLE' + 726 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, optr)} + | ^~~~~~~~~~~~~~ +/build/libminc-2.4.05/libsrc/minc_useful.h:123:23: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] + 123 | #define MIN( x, y ) ( ((x) <= (y)) ? (x) : (y) ) + | ^ +/build/libminc-2.4.05/libsrc/minc_basic.h:200:26: note: in expansion of macro 'MIN' + 200 | *((float *) ptr) = MIN(FLT_MAX,dvalue); \ + | ^~~ +/build/libminc-2.4.05/libsrc/dim_conversion.c:726:11: note: in expansion of macro 'MI_FROM_DOUBLE' + 726 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, optr)} + | ^~~~~~~~~~~~~~ +/build/libminc-2.4.05/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'unsigned char' may change value [-Wfloat-conversion] + 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) + | ^ +/build/libminc-2.4.05/libsrc/minc_basic.h:161:37: note: in expansion of macro 'ROUND' + 161 | *((unsigned char *) ptr) = ROUND(dvalue); \ + | ^~~~~ +/build/libminc-2.4.05/libsrc/dim_conversion.c:734:17: note: in expansion of macro 'MI_FROM_DOUBLE' + 734 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, ptr)} + | ^~~~~~~~~~~~~~ +/build/libminc-2.4.05/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'signed char' may change value [-Wfloat-conversion] + 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) + | ^ +/build/libminc-2.4.05/libsrc/minc_basic.h:166:35: note: in expansion of macro 'ROUND' + 166 | *((signed char *) ptr) = ROUND(dvalue); \ + | ^~~~~ +/build/libminc-2.4.05/libsrc/dim_conversion.c:734:17: note: in expansion of macro 'MI_FROM_DOUBLE' + 734 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, ptr)} + | ^~~~~~~~~~~~~~ +/build/libminc-2.4.05/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'short unsigned int' may change value [-Wfloat-conversion] + 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) + | ^ +/build/libminc-2.4.05/libsrc/minc_basic.h:175:38: note: in expansion of macro 'ROUND' + 175 | *((unsigned short *) ptr) = ROUND(dvalue); \ + | ^~~~~ +/build/libminc-2.4.05/libsrc/dim_conversion.c:734:17: note: in expansion of macro 'MI_FROM_DOUBLE' + 734 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, ptr)} + | ^~~~~~~~~~~~~~ +/build/libminc-2.4.05/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'short int' may change value [-Wfloat-conversion] + 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) + | ^ +/build/libminc-2.4.05/libsrc/minc_basic.h:180:36: note: in expansion of macro 'ROUND' + 180 | *((signed short *) ptr) = ROUND(dvalue); \ + | ^~~~~ +/build/libminc-2.4.05/libsrc/dim_conversion.c:734:17: note: in expansion of macro 'MI_FROM_DOUBLE' + 734 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, ptr)} + | ^~~~~~~~~~~~~~ +/build/libminc-2.4.05/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'unsigned int' may change value [-Wfloat-conversion] + 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) + | ^ +/build/libminc-2.4.05/libsrc/minc_basic.h:189:36: note: in expansion of macro 'ROUND' + 189 | *((unsigned int *) ptr) = ROUND(dvalue); \ + | ^~~~~ +/build/libminc-2.4.05/libsrc/dim_conversion.c:734:17: note: in expansion of macro 'MI_FROM_DOUBLE' + 734 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, ptr)} + | ^~~~~~~~~~~~~~ +/build/libminc-2.4.05/libsrc/minc_useful.h:115:20: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] + 115 | #define ROUND( x ) ((x) + ( ((x) >= 0) ? 0.5 : (-0.5) ) ) + | ^ +/build/libminc-2.4.05/libsrc/minc_basic.h:194:34: note: in expansion of macro 'ROUND' + 194 | *((signed int *) ptr) = ROUND(dvalue); \ + | ^~~~~ +/build/libminc-2.4.05/libsrc/dim_conversion.c:734:17: note: in expansion of macro 'MI_FROM_DOUBLE' + 734 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, ptr)} + | ^~~~~~~~~~~~~~ +/build/libminc-2.4.05/libsrc/minc_useful.h:123:23: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] + 123 | #define MIN( x, y ) ( ((x) <= (y)) ? (x) : (y) ) + | ^ +/build/libminc-2.4.05/libsrc/minc_basic.h:200:26: note: in expansion of macro 'MIN' + 200 | *((float *) ptr) = MIN(FLT_MAX,dvalue); \ + | ^~~ +/build/libminc-2.4.05/libsrc/dim_conversion.c:734:17: note: in expansion of macro 'MI_FROM_DOUBLE' + 734 | {MI_FROM_DOUBLE(dvalue, dcp->outtype, dcp->outsign, ptr)} + | ^~~~~~~~~~~~~~ +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/libsrc/voxel_loop.c.o -MF CMakeFiles/minc2.dir/libsrc/voxel_loop.c.o.d -o CMakeFiles/minc2.dir/libsrc/voxel_loop.c.o -c /build/libminc-2.4.05/libsrc/voxel_loop.c +[ 30%] Building C object CMakeFiles/minc2_static.dir/volume_io/Geometry/transforms.c.o +[ 30%] Building C object CMakeFiles/minc2_static.dir/volume_io/MNI_formats/gen_xf_io.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/Geometry/transforms.c.o -MF CMakeFiles/minc2_static.dir/volume_io/Geometry/transforms.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/Geometry/transforms.c.o -c /build/libminc-2.4.05/volume_io/Geometry/transforms.c +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/MNI_formats/gen_xf_io.c.o -MF CMakeFiles/minc2_static.dir/volume_io/MNI_formats/gen_xf_io.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/MNI_formats/gen_xf_io.c.o -c /build/libminc-2.4.05/volume_io/MNI_formats/gen_xf_io.c +[ 30%] Building C object CMakeFiles/minc2.dir/libsrc/hdf_convenience.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/libsrc/hdf_convenience.c.o -MF CMakeFiles/minc2.dir/libsrc/hdf_convenience.c.o.d -o CMakeFiles/minc2.dir/libsrc/hdf_convenience.c.o -c /build/libminc-2.4.05/libsrc/hdf_convenience.c /build/libminc-2.4.05/libsrc/value_conversion.c: In function 'MI_convert_type': /build/libminc-2.4.05/libsrc/value_conversion.c:622:49: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 622 | (size_t) number_of_values*inincr); @@ -2667,99 +2770,36 @@ /build/libminc-2.4.05/libsrc/value_conversion.c:645:11: note: in expansion of macro 'MI_FROM_DOUBLE' 645 | {MI_FROM_DOUBLE(dvalue, outtype, outsgn, outptr)} | ^~~~~~~~~~~~~~ -[ 27%] Building C object CMakeFiles/minc2_static.dir/volume_io/Geometry/colour_def.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/Geometry/colour_def.c.o -MF CMakeFiles/minc2_static.dir/volume_io/Geometry/colour_def.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/Geometry/colour_def.c.o -c /build/libminc-2.4.05/volume_io/Geometry/colour_def.c -[ 27%] Building C object CMakeFiles/minc2_static.dir/volume_io/Geometry/colour.c.o -/build/libminc-2.4.05/libsrc/minc_simple.c: In function 'minc_load_data': -/build/libminc-2.4.05/libsrc/minc_simple.c:393:27: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'long int' may change the sign of the result [-Wsign-conversion] - 393 | ucount[j++] = dim_len[i]; - | ^~~~~~~ -/build/libminc-2.4.05/libsrc/minc_simple.c:397:23: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 397 | restructure_array(var_ndims, dataptr, ucount, nctypelen(nctype), - | ^~~~~~~~~ -In file included from /build/libminc-2.4.05/libsrc/minc.h:172, - from /build/libminc-2.4.05/libsrc/minc_private.h:83, - from /build/libminc-2.4.05/libsrc/minc_simple.c:38: -/build/libminc-2.4.05/libsrc/minc_compat.h:67:19: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 67 | #define nctypelen MI2typelen -/build/libminc-2.4.05/libsrc/minc_simple.c:397:51: note: in expansion of macro 'nctypelen' - 397 | restructure_array(var_ndims, dataptr, ucount, nctypelen(nctype), - | ^~~~~~~~~ -/build/libminc-2.4.05/libsrc/minc_simple.c:416:77: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - 416 | p_file->file_atts = (struct att_info *) malloc(sizeof (struct att_info) * - | ^ -/build/libminc-2.4.05/libsrc/minc_simple.c:419:77: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - 419 | p_file->file_vars = (struct var_info *) malloc(sizeof (struct var_info) * - | ^ -/build/libminc-2.4.05/libsrc/minc_simple.c:431:48: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 431 | p_att->att_val = malloc(p_att->att_len * nctypelen(p_att->att_type)); - | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/libminc-2.4.05/libsrc/minc_simple.c:446:51: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - 446 | p_var->var_atts = malloc(p_var->var_natts * - | ^ -/build/libminc-2.4.05/libsrc/minc_simple.c:462:52: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 462 | p_att->att_val = malloc(p_att->att_len * nctypelen(p_att->att_type)); - | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/libminc-2.4.05/libsrc/minc_simple.c: In function 'minc_transform_to_world': -/build/libminc-2.4.05/libsrc/minc_simple.c:1026:14: warning: conversion from 'long int' to 'double' may change value [-Wconversion] - 1026 | input[0] = voxel[spatial_axes[0]]; - | ^~~~~ -/build/libminc-2.4.05/libsrc/minc_simple.c:1027:14: warning: conversion from 'long int' to 'double' may change value [-Wconversion] - 1027 | input[1] = voxel[spatial_axes[1]]; - | ^~~~~ -/build/libminc-2.4.05/libsrc/minc_simple.c:1028:14: warning: conversion from 'long int' to 'double' may change value [-Wconversion] - 1028 | input[2] = voxel[spatial_axes[2]]; - | ^~~~~ -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/Geometry/colour.c.o -MF CMakeFiles/minc2_static.dir/volume_io/Geometry/colour.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/Geometry/colour.c.o -c /build/libminc-2.4.05/volume_io/Geometry/colour.c +[ 31%] Building C object CMakeFiles/minc2_static.dir/volume_io/MNI_formats/gen_xfs.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/MNI_formats/gen_xfs.c.o -MF CMakeFiles/minc2_static.dir/volume_io/MNI_formats/gen_xfs.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/MNI_formats/gen_xfs.c.o -c /build/libminc-2.4.05/volume_io/MNI_formats/gen_xfs.c +[ 32%] Building C object CMakeFiles/minc2.dir/libsrc/minc_compat.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/libsrc/minc_compat.c.o -MF CMakeFiles/minc2.dir/libsrc/minc_compat.c.o.d -o CMakeFiles/minc2.dir/libsrc/minc_compat.c.o -c /build/libminc-2.4.05/libsrc/minc_compat.c +[ 32%] Building C object CMakeFiles/minc2_static.dir/volume_io/MNI_formats/grid_transforms.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/MNI_formats/grid_transforms.c.o -MF CMakeFiles/minc2_static.dir/volume_io/MNI_formats/grid_transforms.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/MNI_formats/grid_transforms.c.o -c /build/libminc-2.4.05/volume_io/MNI_formats/grid_transforms.c +[ 32%] Building C object CMakeFiles/minc2.dir/libsrc/minc_simple.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/libsrc/minc_simple.c.o -MF CMakeFiles/minc2.dir/libsrc/minc_simple.c.o.d -o CMakeFiles/minc2.dir/libsrc/minc_simple.c.o -c /build/libminc-2.4.05/libsrc/minc_simple.c +[ 32%] Building C object CMakeFiles/minc2_static.dir/volume_io/MNI_formats/mni_io.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/MNI_formats/mni_io.c.o -MF CMakeFiles/minc2_static.dir/volume_io/MNI_formats/mni_io.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/MNI_formats/mni_io.c.o -c /build/libminc-2.4.05/volume_io/MNI_formats/mni_io.c +/build/libminc-2.4.05/volume_io/MNI_formats/gen_xf_io.c: In function 'output_one_transform': +/build/libminc-2.4.05/volume_io/MNI_formats/gen_xf_io.c:184:74: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 184 | volume_filename = alloc_string( string_length(prefix_filename) + + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ + 185 | 100 ); + | ~~~ +/build/libminc-2.4.05/libsrc/minc_compat.c: In function 'MI2attcopy': +/build/libminc-2.4.05/libsrc/minc_compat.c:307:51: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 307 | val_ptr = malloc(MI2typelen(att_type) * att_length); + | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /build/libminc-2.4.05/libsrc/voxel_loop.c: In function 'get_loop_dim_size': /build/libminc-2.4.05/libsrc/voxel_loop.c:467:14: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 467 | return dim_length; | ^~~~~~~~~~ +[ 33%] Building C object CMakeFiles/minc2.dir/libsrc/minc_format_convert.c.o /build/libminc-2.4.05/libsrc/voxel_loop.c: In function 'setup_variables': /build/libminc-2.4.05/libsrc/voxel_loop.c:970:26: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 970 | input_vector_length = get_vector_length(inmincid, loop_options); | ^~~~~~~~~~~~~~~~~ -/build/libminc-2.4.05/libsrc/voxel_loop.c: In function 'update_history': -/build/libminc-2.4.05/libsrc/voxel_loop.c:1182:15: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 1182 | att_length += strlen(arg_string) + 1; - | ^~ -/build/libminc-2.4.05/libsrc/voxel_loop.c:1182:18: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - 1182 | att_length += strlen(arg_string) + 1; - | ^~~~~~ -/build/libminc-2.4.05/libsrc/voxel_loop.c: In function 'do_voxel_loop': -/build/libminc-2.4.05/libsrc/voxel_loop.c:1306:7: warning: conversion from 'long int' to 'int' may change value [-Wconversion] - 1306 | get_vector_length(get_input_mincid(loopfile_info, 0), loop_options); - | ^~~~~~~~~~~~~~~~~ -/build/libminc-2.4.05/libsrc/voxel_loop.c:1311:10: warning: conversion from 'long int' to 'int' may change value [-Wconversion] - 1311 | get_vector_length(get_output_mincid(loopfile_info, 0), NULL); - | ^~~~~~~~~~~~~~~~~ -/build/libminc-2.4.05/libsrc/voxel_loop.c:1345:30: warning: conversion from 'long int' to 'int' may change value [-Wconversion] - 1345 | num_input_buffers, chunk_num_voxels, input_vector_length, - | ^~~~~~~~~~~~~~~~ -/build/libminc-2.4.05/libsrc/voxel_loop.c:1347:29: warning: conversion from 'long int' to 'int' may change value [-Wconversion] - 1347 | num_output_files, block_num_voxels, output_vector_length, - | ^~~~~~~~~~~~~~~~ -/build/libminc-2.4.05/libsrc/voxel_loop.c:1349:30: warning: conversion from 'long int' to 'int' may change value [-Wconversion] - 1349 | num_extra_buffers, chunk_num_voxels, output_vector_length, - | ^~~~~~~~~~~~~~~~ -/build/libminc-2.4.05/libsrc/voxel_loop.c:1712:30: warning: conversion from 'long int' to 'int' may change value [-Wconversion] - 1712 | num_input_buffers, chunk_num_voxels, input_vector_length, - | ^~~~~~~~~~~~~~~~ -/build/libminc-2.4.05/libsrc/voxel_loop.c:1714:29: warning: conversion from 'long int' to 'int' may change value [-Wconversion] - 1714 | num_output_files, block_num_voxels, output_vector_length, - | ^~~~~~~~~~~~~~~~ -/build/libminc-2.4.05/libsrc/voxel_loop.c:1716:30: warning: conversion from 'long int' to 'int' may change value [-Wconversion] - 1716 | num_extra_buffers, chunk_num_voxels, output_vector_length, - | ^~~~~~~~~~~~~~~~ -/build/libminc-2.4.05/libsrc/voxel_loop.c: In function 'setup_looping': -/build/libminc-2.4.05/libsrc/voxel_loop.c:1800:26: warning: conversion from 'long int' to 'int' may change value [-Wconversion] - 1800 | input_vector_length = get_vector_length(inmincid, loop_options); - | ^~~~~~~~~~~~~~~~~ -/build/libminc-2.4.05/libsrc/voxel_loop.c:1803:10: warning: conversion from 'long int' to 'int' may change value [-Wconversion] - 1803 | get_vector_length(get_output_mincid(loopfile_info, 0), NULL); - | ^~~~~~~~~~~~~~~~~ -[ 27%] Building C object CMakeFiles/minc2_static.dir/volume_io/Geometry/gaussian.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/Geometry/gaussian.c.o -MF CMakeFiles/minc2_static.dir/volume_io/Geometry/gaussian.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/Geometry/gaussian.c.o -c /build/libminc-2.4.05/volume_io/Geometry/gaussian.c +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/libsrc/minc_format_convert.c.o -MF CMakeFiles/minc2.dir/libsrc/minc_format_convert.c.o.d -o CMakeFiles/minc2.dir/libsrc/minc_format_convert.c.o -c /build/libminc-2.4.05/libsrc/minc_format_convert.c /build/libminc-2.4.05/libsrc/hdf_convenience.c: In function 'hdf_var_add': /build/libminc-2.4.05/libsrc/hdf_convenience.c:205:59: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 205 | new->dims = (hsize_t *) malloc(sizeof (hsize_t) * ndims); @@ -2779,17 +2819,40 @@ /build/libminc-2.4.05/libsrc/hdf_convenience.c:374:20: warning: conversion from 'hssize_t' {aka 'long long int'} to 'int' may change value [-Wconversion] 374 | int spc_size = H5Sget_simple_extent_npoints(spc_id); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/libminc-2.4.05/libsrc/voxel_loop.c: In function 'update_history': +/build/libminc-2.4.05/libsrc/voxel_loop.c:1182:15: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 1182 | att_length += strlen(arg_string) + 1; + | ^~ /build/libminc-2.4.05/libsrc/hdf_convenience.c: In function 'hdf_attname': /build/libminc-2.4.05/libsrc/hdf_convenience.c:458:38: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 458 | att_id = H5Aopen_idx(loc_id, attnum); | ^~~~~~ +/build/libminc-2.4.05/libsrc/voxel_loop.c:1182:18: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + 1182 | att_length += strlen(arg_string) + 1; + | ^~~~~~ /build/libminc-2.4.05/libsrc/hdf_convenience.c:461:18: warning: conversion from 'ssize_t' {aka 'long int'} to 'int' may change value [-Wconversion] 461 | status = H5Aget_name(att_id, MAX_NC_NAME, name); | ^~~~~~~~~~~ +/build/libminc-2.4.05/libsrc/voxel_loop.c: In function 'do_voxel_loop': +/build/libminc-2.4.05/libsrc/voxel_loop.c:1306:7: warning: conversion from 'long int' to 'int' may change value [-Wconversion] + 1306 | get_vector_length(get_input_mincid(loopfile_info, 0), loop_options); + | ^~~~~~~~~~~~~~~~~ /build/libminc-2.4.05/libsrc/hdf_convenience.c: In function 'hdf_attinq': +/build/libminc-2.4.05/libsrc/voxel_loop.c:1311:10: warning: conversion from 'long int' to 'int' may change value [-Wconversion] + 1311 | get_vector_length(get_output_mincid(loopfile_info, 0), NULL); + | ^~~~~~~~~~~~~~~~~ /build/libminc-2.4.05/libsrc/hdf_convenience.c:581:25: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 581 | *length_ptr = typ_size; | ^~~~~~~~ +/build/libminc-2.4.05/libsrc/voxel_loop.c:1345:30: warning: conversion from 'long int' to 'int' may change value [-Wconversion] + 1345 | num_input_buffers, chunk_num_voxels, input_vector_length, + | ^~~~~~~~~~~~~~~~ +/build/libminc-2.4.05/libsrc/voxel_loop.c:1347:29: warning: conversion from 'long int' to 'int' may change value [-Wconversion] + 1347 | num_output_files, block_num_voxels, output_vector_length, + | ^~~~~~~~~~~~~~~~ +/build/libminc-2.4.05/libsrc/voxel_loop.c:1349:30: warning: conversion from 'long int' to 'int' may change value [-Wconversion] + 1349 | num_extra_buffers, chunk_num_voxels, output_vector_length, + | ^~~~~~~~~~~~~~~~ /build/libminc-2.4.05/libsrc/hdf_convenience.c:584:25: warning: conversion from 'hssize_t' {aka 'long long int'} to 'int' may change value [-Wconversion] 584 | *length_ptr = H5Sget_simple_extent_npoints(spc_id); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -2801,13 +2864,29 @@ /build/libminc-2.4.05/libsrc/hdf_convenience.c:961:49: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] 961 | hdf_set_length(var->dset_id, dimnm, length); | ^~~~~~ +/build/libminc-2.4.05/libsrc/voxel_loop.c:1712:30: warning: conversion from 'long int' to 'int' may change value [-Wconversion] + 1712 | num_input_buffers, chunk_num_voxels, input_vector_length, + | ^~~~~~~~~~~~~~~~ +/build/libminc-2.4.05/libsrc/voxel_loop.c:1714:29: warning: conversion from 'long int' to 'int' may change value [-Wconversion] + 1714 | num_output_files, block_num_voxels, output_vector_length, + | ^~~~~~~~~~~~~~~~ +/build/libminc-2.4.05/libsrc/voxel_loop.c:1716:30: warning: conversion from 'long int' to 'int' may change value [-Wconversion] + 1716 | num_extra_buffers, chunk_num_voxels, output_vector_length, + | ^~~~~~~~~~~~~~~~ /build/libminc-2.4.05/libsrc/hdf_convenience.c: In function 'hdf_attput': /build/libminc-2.4.05/libsrc/hdf_convenience.c:1150:30: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 1150 | H5Tset_size(ftyp_id, val_len); | ^~~~~~~ +/build/libminc-2.4.05/libsrc/voxel_loop.c: In function 'setup_looping': /build/libminc-2.4.05/libsrc/hdf_convenience.c:1188:33: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 1188 | hsize_t temp_size = val_len; | ^~~~~~~ +/build/libminc-2.4.05/libsrc/voxel_loop.c:1800:26: warning: conversion from 'long int' to 'int' may change value [-Wconversion] + 1800 | input_vector_length = get_vector_length(inmincid, loop_options); + | ^~~~~~~~~~~~~~~~~ +/build/libminc-2.4.05/libsrc/voxel_loop.c:1803:10: warning: conversion from 'long int' to 'int' may change value [-Wconversion] + 1803 | get_vector_length(get_output_mincid(loopfile_info, 0), NULL); + | ^~~~~~~~~~~~~~~~~ /build/libminc-2.4.05/libsrc/hdf_convenience.c: In function 'hdf_vardef': /build/libminc-2.4.05/libsrc/hdf_convenience.c:1325:19: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'long int' may change the sign of the result [-Wsign-conversion] 1325 | dims[i] = length; @@ -2873,12 +2952,10 @@ /build/libminc-2.4.05/libsrc/hdf_convenience.c:1840:46: warning: conversion to 'long long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] 1840 | myedges[idim] = varp->dims[idim] - mystart[idim]; | ^ -[ 28%] Building C object CMakeFiles/minc2_static.dir/volume_io/Geometry/inverse.c.o /build/libminc-2.4.05/libsrc/hdf_convenience.c:1840:29: warning: conversion to 'long int' from 'long long unsigned int' may change the sign of the result [-Wsign-conversion] 1840 | myedges[idim] = varp->dims[idim] - mystart[idim]; | ^~~~ /build/libminc-2.4.05/libsrc/hdf_convenience.c: In function 'hdf_varput': -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/Geometry/inverse.c.o -MF CMakeFiles/minc2_static.dir/volume_io/Geometry/inverse.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/Geometry/inverse.c.o -c /build/libminc-2.4.05/volume_io/Geometry/inverse.c /build/libminc-2.4.05/libsrc/hdf_convenience.c:1960:19: warning: conversion to 'hsize_t' {aka 'long long unsigned int'} from 'long int' may change the sign of the result [-Wsign-conversion] 1960 | fstart[i] = start_ptr[i]; | ^~~~~~~~~ @@ -2913,32 +2990,20 @@ /build/libminc-2.4.05/libsrc/hdf_convenience.c:2351:35: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 2351 | file_id = H5Fcreate(path, cmode, H5P_DEFAULT, fpid); | ^~~~~ -[ 28%] Building C object CMakeFiles/minc2_static.dir/volume_io/Geometry/newton.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/Geometry/newton.c.o -MF CMakeFiles/minc2_static.dir/volume_io/Geometry/newton.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/Geometry/newton.c.o -c /build/libminc-2.4.05/volume_io/Geometry/newton.c -[ 29%] Building C object CMakeFiles/minc2.dir/libsrc/minc_compat.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/libsrc/minc_compat.c.o -MF CMakeFiles/minc2.dir/libsrc/minc_compat.c.o.d -o CMakeFiles/minc2.dir/libsrc/minc_compat.c.o -c /build/libminc-2.4.05/libsrc/minc_compat.c -[ 29%] Building C object CMakeFiles/minc2.dir/libsrc/minc_simple.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/libsrc/minc_simple.c.o -MF CMakeFiles/minc2.dir/libsrc/minc_simple.c.o.d -o CMakeFiles/minc2.dir/libsrc/minc_simple.c.o -c /build/libminc-2.4.05/libsrc/minc_simple.c -[ 29%] Building C object CMakeFiles/minc2_static.dir/volume_io/Geometry/points.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/Geometry/points.c.o -MF CMakeFiles/minc2_static.dir/volume_io/Geometry/points.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/Geometry/points.c.o -c /build/libminc-2.4.05/volume_io/Geometry/points.c -[ 30%] Building C object CMakeFiles/minc2.dir/libsrc/minc_format_convert.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/libsrc/minc_format_convert.c.o -MF CMakeFiles/minc2.dir/libsrc/minc_format_convert.c.o.d -o CMakeFiles/minc2.dir/libsrc/minc_format_convert.c.o -c /build/libminc-2.4.05/libsrc/minc_format_convert.c -[ 31%] Building C object CMakeFiles/minc2_static.dir/volume_io/Geometry/splines.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/Geometry/splines.c.o -MF CMakeFiles/minc2_static.dir/volume_io/Geometry/splines.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/Geometry/splines.c.o -c /build/libminc-2.4.05/volume_io/Geometry/splines.c -[ 31%] Building C object CMakeFiles/minc2_static.dir/volume_io/Geometry/tensors.c.o -/build/libminc-2.4.05/libsrc/minc_compat.c: In function 'MI2attcopy': -/build/libminc-2.4.05/libsrc/minc_compat.c:307:51: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 307 | val_ptr = malloc(MI2typelen(att_type) * att_length); - | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/Geometry/tensors.c.o -MF CMakeFiles/minc2_static.dir/volume_io/Geometry/tensors.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/Geometry/tensors.c.o -c /build/libminc-2.4.05/volume_io/Geometry/tensors.c -[ 32%] Building C object CMakeFiles/minc2_static.dir/volume_io/Geometry/transforms.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/Geometry/transforms.c.o -MF CMakeFiles/minc2_static.dir/volume_io/Geometry/transforms.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/Geometry/transforms.c.o -c /build/libminc-2.4.05/volume_io/Geometry/transforms.c -[ 32%] Building C object CMakeFiles/minc2_static.dir/volume_io/MNI_formats/gen_xf_io.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/MNI_formats/gen_xf_io.c.o -MF CMakeFiles/minc2_static.dir/volume_io/MNI_formats/gen_xf_io.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/MNI_formats/gen_xf_io.c.o -c /build/libminc-2.4.05/volume_io/MNI_formats/gen_xf_io.c -[ 32%] Building C object CMakeFiles/minc2.dir/volume_io/Geometry/colour.c.o +[ 34%] Building C object CMakeFiles/minc2_static.dir/volume_io/MNI_formats/tag_points.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/MNI_formats/tag_points.c.o -MF CMakeFiles/minc2_static.dir/volume_io/MNI_formats/tag_points.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/MNI_formats/tag_points.c.o -c /build/libminc-2.4.05/volume_io/MNI_formats/tag_points.c +In file included from /build/libminc-2.4.05/volume_io/Include/volume_io.h:40, + from /build/libminc-2.4.05/volume_io/Include/internal_volume_io.h:29, + from /build/libminc-2.4.05/volume_io/MNI_formats/grid_transforms.c:18: +/build/libminc-2.4.05/volume_io/MNI_formats/grid_transforms.c: In function 'evaluate_grid_volume': +/build/libminc-2.4.05/volume_io/Include/volume_io/basic.h:110:29: warning: conversion from 'long int' to 'int' may change value [-Wconversion] + 110 | #define VIO_FLOOR( x ) ((long) floor(x)) + | ^ +/build/libminc-2.4.05/volume_io/MNI_formats/grid_transforms.c:532:24: note: in expansion of macro 'VIO_FLOOR' + 532 | start[d] = VIO_FLOOR( pos ); + | ^~~~~~~~~ +[ 34%] Building C object CMakeFiles/minc2.dir/volume_io/Geometry/colour.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/volume_io/Geometry/colour.c.o -MF CMakeFiles/minc2.dir/volume_io/Geometry/colour.c.o.d -o CMakeFiles/minc2.dir/volume_io/Geometry/colour.c.o -c /build/libminc-2.4.05/volume_io/Geometry/colour.c -[ 33%] Building C object CMakeFiles/minc2.dir/volume_io/Geometry/colour_def.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/volume_io/Geometry/colour_def.c.o -MF CMakeFiles/minc2.dir/volume_io/Geometry/colour_def.c.o.d -o CMakeFiles/minc2.dir/volume_io/Geometry/colour_def.c.o -c /build/libminc-2.4.05/volume_io/Geometry/colour_def.c /build/libminc-2.4.05/libsrc/minc_simple.c: In function 'minc_load_data': /build/libminc-2.4.05/libsrc/minc_simple.c:393:27: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'long int' may change the sign of the result [-Wsign-conversion] 393 | ucount[j++] = dim_len[i]; @@ -2979,72 +3044,44 @@ /build/libminc-2.4.05/libsrc/minc_simple.c:1028:14: warning: conversion from 'long int' to 'double' may change value [-Wconversion] 1028 | input[2] = voxel[spatial_axes[2]]; | ^~~~~ -[ 34%] Building C object CMakeFiles/minc2_static.dir/volume_io/MNI_formats/gen_xfs.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/MNI_formats/gen_xfs.c.o -MF CMakeFiles/minc2_static.dir/volume_io/MNI_formats/gen_xfs.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/MNI_formats/gen_xfs.c.o -c /build/libminc-2.4.05/volume_io/MNI_formats/gen_xfs.c -/build/libminc-2.4.05/volume_io/MNI_formats/gen_xf_io.c: In function 'output_one_transform': -/build/libminc-2.4.05/volume_io/MNI_formats/gen_xf_io.c:184:74: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 184 | volume_filename = alloc_string( string_length(prefix_filename) + - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ - 185 | 100 ); - | ~~~ -[ 34%] Building C object CMakeFiles/minc2_static.dir/volume_io/MNI_formats/grid_transforms.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/MNI_formats/grid_transforms.c.o -MF CMakeFiles/minc2_static.dir/volume_io/MNI_formats/grid_transforms.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/MNI_formats/grid_transforms.c.o -c /build/libminc-2.4.05/volume_io/MNI_formats/grid_transforms.c -[ 34%] Building C object CMakeFiles/minc2.dir/volume_io/Geometry/gaussian.c.o +[ 35%] Building C object CMakeFiles/minc2.dir/volume_io/Geometry/colour_def.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/volume_io/Geometry/colour_def.c.o -MF CMakeFiles/minc2.dir/volume_io/Geometry/colour_def.c.o.d -o CMakeFiles/minc2.dir/volume_io/Geometry/colour_def.c.o -c /build/libminc-2.4.05/volume_io/Geometry/colour_def.c +[ 35%] Building C object CMakeFiles/minc2.dir/volume_io/Geometry/gaussian.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/volume_io/Geometry/gaussian.c.o -MF CMakeFiles/minc2.dir/volume_io/Geometry/gaussian.c.o.d -o CMakeFiles/minc2.dir/volume_io/Geometry/gaussian.c.o -c /build/libminc-2.4.05/volume_io/Geometry/gaussian.c -[ 34%] Building C object CMakeFiles/minc2.dir/volume_io/Geometry/inverse.c.o +[ 35%] Building C object CMakeFiles/minc2_static.dir/volume_io/MNI_formats/thin_plate_spline.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/MNI_formats/thin_plate_spline.c.o -MF CMakeFiles/minc2_static.dir/volume_io/MNI_formats/thin_plate_spline.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/MNI_formats/thin_plate_spline.c.o -c /build/libminc-2.4.05/volume_io/MNI_formats/thin_plate_spline.c +[ 35%] Building C object CMakeFiles/minc2.dir/volume_io/Geometry/inverse.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/volume_io/Geometry/inverse.c.o -MF CMakeFiles/minc2.dir/volume_io/Geometry/inverse.c.o.d -o CMakeFiles/minc2.dir/volume_io/Geometry/inverse.c.o -c /build/libminc-2.4.05/volume_io/Geometry/inverse.c -[ 35%] Building C object CMakeFiles/minc2.dir/volume_io/Geometry/newton.c.o +[ 36%] Building C object CMakeFiles/minc2_static.dir/volume_io/Prog_utils/alloc.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/Prog_utils/alloc.c.o -MF CMakeFiles/minc2_static.dir/volume_io/Prog_utils/alloc.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/alloc.c.o -c /build/libminc-2.4.05/volume_io/Prog_utils/alloc.c +[ 36%] Building C object CMakeFiles/minc2_static.dir/volume_io/Prog_utils/alloc_check.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/Prog_utils/alloc_check.c.o -MF CMakeFiles/minc2_static.dir/volume_io/Prog_utils/alloc_check.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/alloc_check.c.o -c /build/libminc-2.4.05/volume_io/Prog_utils/alloc_check.c +[ 37%] Building C object CMakeFiles/minc2_static.dir/volume_io/Prog_utils/arrays.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/Prog_utils/arrays.c.o -MF CMakeFiles/minc2_static.dir/volume_io/Prog_utils/arrays.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/arrays.c.o -c /build/libminc-2.4.05/volume_io/Prog_utils/arrays.c +[ 38%] Building C object CMakeFiles/minc2.dir/volume_io/Geometry/newton.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/volume_io/Geometry/newton.c.o -MF CMakeFiles/minc2.dir/volume_io/Geometry/newton.c.o.d -o CMakeFiles/minc2.dir/volume_io/Geometry/newton.c.o -c /build/libminc-2.4.05/volume_io/Geometry/newton.c -[ 35%] Building C object CMakeFiles/minc2.dir/volume_io/Geometry/points.c.o +[ 38%] Building C object CMakeFiles/minc2.dir/volume_io/Geometry/points.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/volume_io/Geometry/points.c.o -MF CMakeFiles/minc2.dir/volume_io/Geometry/points.c.o.d -o CMakeFiles/minc2.dir/volume_io/Geometry/points.c.o -c /build/libminc-2.4.05/volume_io/Geometry/points.c -[ 35%] Building C object CMakeFiles/minc2_static.dir/volume_io/MNI_formats/mni_io.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/MNI_formats/mni_io.c.o -MF CMakeFiles/minc2_static.dir/volume_io/MNI_formats/mni_io.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/MNI_formats/mni_io.c.o -c /build/libminc-2.4.05/volume_io/MNI_formats/mni_io.c -[ 36%] Building C object CMakeFiles/minc2_static.dir/volume_io/MNI_formats/tag_points.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/MNI_formats/tag_points.c.o -MF CMakeFiles/minc2_static.dir/volume_io/MNI_formats/tag_points.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/MNI_formats/tag_points.c.o -c /build/libminc-2.4.05/volume_io/MNI_formats/tag_points.c -In file included from /build/libminc-2.4.05/volume_io/Include/volume_io.h:40, - from /build/libminc-2.4.05/volume_io/Include/internal_volume_io.h:29, - from /build/libminc-2.4.05/volume_io/MNI_formats/grid_transforms.c:18: -/build/libminc-2.4.05/volume_io/MNI_formats/grid_transforms.c: In function 'evaluate_grid_volume': -/build/libminc-2.4.05/volume_io/Include/volume_io/basic.h:110:29: warning: conversion from 'long int' to 'int' may change value [-Wconversion] - 110 | #define VIO_FLOOR( x ) ((long) floor(x)) - | ^ -/build/libminc-2.4.05/volume_io/MNI_formats/grid_transforms.c:532:24: note: in expansion of macro 'VIO_FLOOR' - 532 | start[d] = VIO_FLOOR( pos ); - | ^~~~~~~~~ -[ 36%] Building C object CMakeFiles/minc2_static.dir/volume_io/MNI_formats/thin_plate_spline.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/MNI_formats/thin_plate_spline.c.o -MF CMakeFiles/minc2_static.dir/volume_io/MNI_formats/thin_plate_spline.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/MNI_formats/thin_plate_spline.c.o -c /build/libminc-2.4.05/volume_io/MNI_formats/thin_plate_spline.c -[ 37%] Building C object CMakeFiles/minc2.dir/volume_io/Geometry/splines.c.o +[ 38%] Building C object CMakeFiles/minc2_static.dir/volume_io/Prog_utils/files.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/Prog_utils/files.c.o -MF CMakeFiles/minc2_static.dir/volume_io/Prog_utils/files.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/files.c.o -c /build/libminc-2.4.05/volume_io/Prog_utils/files.c +[ 39%] Building C object CMakeFiles/minc2.dir/volume_io/Geometry/splines.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/volume_io/Geometry/splines.c.o -MF CMakeFiles/minc2.dir/volume_io/Geometry/splines.c.o.d -o CMakeFiles/minc2.dir/volume_io/Geometry/splines.c.o -c /build/libminc-2.4.05/volume_io/Geometry/splines.c -[ 37%] Building C object CMakeFiles/minc2.dir/volume_io/Geometry/tensors.c.o +[ 39%] Building C object CMakeFiles/minc2.dir/volume_io/Geometry/tensors.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/volume_io/Geometry/tensors.c.o -MF CMakeFiles/minc2.dir/volume_io/Geometry/tensors.c.o.d -o CMakeFiles/minc2.dir/volume_io/Geometry/tensors.c.o -c /build/libminc-2.4.05/volume_io/Geometry/tensors.c -[ 38%] Building C object CMakeFiles/minc2.dir/volume_io/Geometry/transforms.c.o +[ 40%] Building C object CMakeFiles/minc2.dir/volume_io/Geometry/transforms.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/volume_io/Geometry/transforms.c.o -MF CMakeFiles/minc2.dir/volume_io/Geometry/transforms.c.o.d -o CMakeFiles/minc2.dir/volume_io/Geometry/transforms.c.o -c /build/libminc-2.4.05/volume_io/Geometry/transforms.c -[ 38%] Building C object CMakeFiles/minc2.dir/volume_io/MNI_formats/gen_xf_io.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/volume_io/MNI_formats/gen_xf_io.c.o -MF CMakeFiles/minc2.dir/volume_io/MNI_formats/gen_xf_io.c.o.d -o CMakeFiles/minc2.dir/volume_io/MNI_formats/gen_xf_io.c.o -c /build/libminc-2.4.05/volume_io/MNI_formats/gen_xf_io.c -[ 39%] Building C object CMakeFiles/minc2_static.dir/volume_io/Prog_utils/alloc.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/Prog_utils/alloc.c.o -MF CMakeFiles/minc2_static.dir/volume_io/Prog_utils/alloc.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/alloc.c.o -c /build/libminc-2.4.05/volume_io/Prog_utils/alloc.c -[ 39%] Building C object CMakeFiles/minc2.dir/volume_io/MNI_formats/gen_xfs.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/volume_io/MNI_formats/gen_xfs.c.o -MF CMakeFiles/minc2.dir/volume_io/MNI_formats/gen_xfs.c.o.d -o CMakeFiles/minc2.dir/volume_io/MNI_formats/gen_xfs.c.o -c /build/libminc-2.4.05/volume_io/MNI_formats/gen_xfs.c -[ 39%] Building C object CMakeFiles/minc2_static.dir/volume_io/Prog_utils/alloc_check.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/Prog_utils/alloc_check.c.o -MF CMakeFiles/minc2_static.dir/volume_io/Prog_utils/alloc_check.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/alloc_check.c.o -c /build/libminc-2.4.05/volume_io/Prog_utils/alloc_check.c -[ 40%] Building C object CMakeFiles/minc2_static.dir/volume_io/Prog_utils/arrays.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/Prog_utils/arrays.c.o -MF CMakeFiles/minc2_static.dir/volume_io/Prog_utils/arrays.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/arrays.c.o -c /build/libminc-2.4.05/volume_io/Prog_utils/arrays.c -[ 40%] Building C object CMakeFiles/minc2_static.dir/volume_io/Prog_utils/files.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/Prog_utils/files.c.o -MF CMakeFiles/minc2_static.dir/volume_io/Prog_utils/files.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/files.c.o -c /build/libminc-2.4.05/volume_io/Prog_utils/files.c -/build/libminc-2.4.05/volume_io/MNI_formats/gen_xf_io.c: In function 'output_one_transform': -/build/libminc-2.4.05/volume_io/MNI_formats/gen_xf_io.c:184:74: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 184 | volume_filename = alloc_string( string_length(prefix_filename) + - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ - 185 | 100 ); - | ~~~ -[ 41%] Building C object CMakeFiles/minc2.dir/volume_io/MNI_formats/grid_transforms.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/volume_io/MNI_formats/grid_transforms.c.o -MF CMakeFiles/minc2.dir/volume_io/MNI_formats/grid_transforms.c.o.d -o CMakeFiles/minc2.dir/volume_io/MNI_formats/grid_transforms.c.o -c /build/libminc-2.4.05/volume_io/MNI_formats/grid_transforms.c -[ 42%] Building C object CMakeFiles/minc2_static.dir/volume_io/Prog_utils/print.c.o +[ 41%] Building C object CMakeFiles/minc2_static.dir/volume_io/Prog_utils/print.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/Prog_utils/print.c.o -MF CMakeFiles/minc2_static.dir/volume_io/Prog_utils/print.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/print.c.o -c /build/libminc-2.4.05/volume_io/Prog_utils/print.c -[ 42%] Building C object CMakeFiles/minc2_static.dir/volume_io/Prog_utils/progress.c.o +[ 41%] Building C object CMakeFiles/minc2_static.dir/volume_io/Prog_utils/progress.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/Prog_utils/progress.c.o -MF CMakeFiles/minc2_static.dir/volume_io/Prog_utils/progress.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/progress.c.o -c /build/libminc-2.4.05/volume_io/Prog_utils/progress.c -[ 42%] Building C object CMakeFiles/minc2_static.dir/volume_io/Prog_utils/string.c.o +[ 41%] Building C object CMakeFiles/minc2_static.dir/volume_io/Prog_utils/string.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/Prog_utils/string.c.o -MF CMakeFiles/minc2_static.dir/volume_io/Prog_utils/string.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/string.c.o -c /build/libminc-2.4.05/volume_io/Prog_utils/string.c +[ 42%] Building C object CMakeFiles/minc2_static.dir/volume_io/Prog_utils/time.c.o +[ 42%] Building C object CMakeFiles/minc2.dir/volume_io/MNI_formats/gen_xf_io.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/Prog_utils/time.c.o -MF CMakeFiles/minc2_static.dir/volume_io/Prog_utils/time.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/time.c.o -c /build/libminc-2.4.05/volume_io/Prog_utils/time.c +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/volume_io/MNI_formats/gen_xf_io.c.o -MF CMakeFiles/minc2.dir/volume_io/MNI_formats/gen_xf_io.c.o.d -o CMakeFiles/minc2.dir/volume_io/MNI_formats/gen_xf_io.c.o -c /build/libminc-2.4.05/volume_io/MNI_formats/gen_xf_io.c +[ 42%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/evaluate.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/Volumes/evaluate.c.o -MF CMakeFiles/minc2_static.dir/volume_io/Volumes/evaluate.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/Volumes/evaluate.c.o -c /build/libminc-2.4.05/volume_io/Volumes/evaluate.c /build/libminc-2.4.05/volume_io/Prog_utils/files.c: In function 'extract_directory': /build/libminc-2.4.05/volume_io/Prog_utils/files.c:1249:35: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 1249 | directory = alloc_string( slash_index ); @@ -3053,28 +3090,7 @@ /build/libminc-2.4.05/volume_io/Prog_utils/files.c:2445:34: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 2445 | *str = alloc_string( length ); | ^~~~~~ -[ 42%] Building C object CMakeFiles/minc2.dir/volume_io/MNI_formats/mni_io.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/volume_io/MNI_formats/mni_io.c.o -MF CMakeFiles/minc2.dir/volume_io/MNI_formats/mni_io.c.o.d -o CMakeFiles/minc2.dir/volume_io/MNI_formats/mni_io.c.o -c /build/libminc-2.4.05/volume_io/MNI_formats/mni_io.c -In file included from /build/libminc-2.4.05/volume_io/Include/volume_io.h:40, - from /build/libminc-2.4.05/volume_io/Include/internal_volume_io.h:29, - from /build/libminc-2.4.05/volume_io/MNI_formats/grid_transforms.c:18: -/build/libminc-2.4.05/volume_io/MNI_formats/grid_transforms.c: In function 'evaluate_grid_volume': -/build/libminc-2.4.05/volume_io/Include/volume_io/basic.h:110:29: warning: conversion from 'long int' to 'int' may change value [-Wconversion] - 110 | #define VIO_FLOOR( x ) ((long) floor(x)) - | ^ -/build/libminc-2.4.05/volume_io/MNI_formats/grid_transforms.c:532:24: note: in expansion of macro 'VIO_FLOOR' - 532 | start[d] = VIO_FLOOR( pos ); - | ^~~~~~~~~ -[ 43%] Building C object CMakeFiles/minc2_static.dir/volume_io/Prog_utils/time.c.o -[ 44%] Building C object CMakeFiles/minc2.dir/volume_io/MNI_formats/tag_points.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/volume_io/MNI_formats/tag_points.c.o -MF CMakeFiles/minc2.dir/volume_io/MNI_formats/tag_points.c.o.d -o CMakeFiles/minc2.dir/volume_io/MNI_formats/tag_points.c.o -c /build/libminc-2.4.05/volume_io/MNI_formats/tag_points.c -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/Prog_utils/time.c.o -MF CMakeFiles/minc2_static.dir/volume_io/Prog_utils/time.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/Prog_utils/time.c.o -c /build/libminc-2.4.05/volume_io/Prog_utils/time.c -[ 44%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/evaluate.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/Volumes/evaluate.c.o -MF CMakeFiles/minc2_static.dir/volume_io/Volumes/evaluate.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/Volumes/evaluate.c.o -c /build/libminc-2.4.05/volume_io/Volumes/evaluate.c -/build/libminc-2.4.05/volume_io/Prog_utils/progress.c: In function 'show_one_line_progress': -/build/libminc-2.4.05/volume_io/Prog_utils/progress.c:222:35: warning: conversion from 'long int' to 'int' may change value [-Wconversion] - 222 | progress->n_dots_so_far = n_dots; - | ^~~~~~ +[ 42%] Building C object CMakeFiles/minc2.dir/volume_io/MNI_formats/gen_xfs.c.o /build/libminc-2.4.05/volume_io/Prog_utils/string.c: In function 'create_string': /build/libminc-2.4.05/volume_io/Prog_utils/string.c:40:25: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 40 | str = alloc_string( string_length(initial) ); @@ -3083,16 +3099,19 @@ /build/libminc-2.4.05/volume_io/Prog_utils/string.c:235:63: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 235 | stripped = alloc_string( last_non_blank - first_non_blank + 1 ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~ -[ 44%] Building C object CMakeFiles/minc2.dir/volume_io/MNI_formats/thin_plate_spline.c.o -[ 45%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/get_hyperslab.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/volume_io/MNI_formats/gen_xfs.c.o -MF CMakeFiles/minc2.dir/volume_io/MNI_formats/gen_xfs.c.o.d -o CMakeFiles/minc2.dir/volume_io/MNI_formats/gen_xfs.c.o -c /build/libminc-2.4.05/volume_io/MNI_formats/gen_xfs.c +[ 43%] Building C object CMakeFiles/minc2.dir/volume_io/MNI_formats/grid_transforms.c.o +[ 44%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/get_hyperslab.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/Volumes/get_hyperslab.c.o -MF CMakeFiles/minc2_static.dir/volume_io/Volumes/get_hyperslab.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/Volumes/get_hyperslab.c.o -c /build/libminc-2.4.05/volume_io/Volumes/get_hyperslab.c -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/volume_io/MNI_formats/thin_plate_spline.c.o -MF CMakeFiles/minc2.dir/volume_io/MNI_formats/thin_plate_spline.c.o.d -o CMakeFiles/minc2.dir/volume_io/MNI_formats/thin_plate_spline.c.o -c /build/libminc-2.4.05/volume_io/MNI_formats/thin_plate_spline.c -[ 45%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/input_free.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/Volumes/input_free.c.o -MF CMakeFiles/minc2_static.dir/volume_io/Volumes/input_free.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/Volumes/input_free.c.o -c /build/libminc-2.4.05/volume_io/Volumes/input_free.c -[ 46%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/input_mnc.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/Volumes/input_mnc.c.o -MF CMakeFiles/minc2_static.dir/volume_io/Volumes/input_mnc.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/Volumes/input_mnc.c.o -c /build/libminc-2.4.05/volume_io/Volumes/input_mnc.c -[ 47%] Building C object CMakeFiles/minc2.dir/volume_io/Prog_utils/alloc.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/volume_io/Prog_utils/alloc.c.o -MF CMakeFiles/minc2.dir/volume_io/Prog_utils/alloc.c.o.d -o CMakeFiles/minc2.dir/volume_io/Prog_utils/alloc.c.o -c /build/libminc-2.4.05/volume_io/Prog_utils/alloc.c +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/volume_io/MNI_formats/grid_transforms.c.o -MF CMakeFiles/minc2.dir/volume_io/MNI_formats/grid_transforms.c.o.d -o CMakeFiles/minc2.dir/volume_io/MNI_formats/grid_transforms.c.o -c /build/libminc-2.4.05/volume_io/MNI_formats/grid_transforms.c +[ 44%] Building C object CMakeFiles/minc2.dir/volume_io/MNI_formats/mni_io.c.o +/build/libminc-2.4.05/volume_io/Prog_utils/progress.c: In function 'show_one_line_progress': +/build/libminc-2.4.05/volume_io/Prog_utils/progress.c:222:35: warning: conversion from 'long int' to 'int' may change value [-Wconversion] + 222 | progress->n_dots_so_far = n_dots; + | ^~~~~~ +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/volume_io/MNI_formats/mni_io.c.o -MF CMakeFiles/minc2.dir/volume_io/MNI_formats/mni_io.c.o.d -o CMakeFiles/minc2.dir/volume_io/MNI_formats/mni_io.c.o -c /build/libminc-2.4.05/volume_io/MNI_formats/mni_io.c +[ 45%] Building C object CMakeFiles/minc2.dir/volume_io/MNI_formats/tag_points.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/volume_io/MNI_formats/tag_points.c.o -MF CMakeFiles/minc2.dir/volume_io/MNI_formats/tag_points.c.o.d -o CMakeFiles/minc2.dir/volume_io/MNI_formats/tag_points.c.o -c /build/libminc-2.4.05/volume_io/MNI_formats/tag_points.c /build/libminc-2.4.05/volume_io/Prog_utils/time.c: In function 'current_realtime_seconds': /build/libminc-2.4.05/volume_io/Prog_utils/time.c:130:49: warning: conversion from '__syscall_slong_t' {aka 'long int'} to 'double' may change value [-Wconversion] 130 | current_seconds = ts.tv_sec + (ts.tv_nsec / 1.0e9); @@ -3100,12 +3119,14 @@ /build/libminc-2.4.05/volume_io/Prog_utils/time.c:130:35: warning: conversion from '__time_t' {aka 'long int'} to 'double' may change value [-Wconversion] 130 | current_seconds = ts.tv_sec + (ts.tv_nsec / 1.0e9); | ^ -[ 47%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/multidim_arrays.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/Volumes/multidim_arrays.c.o -MF CMakeFiles/minc2_static.dir/volume_io/Volumes/multidim_arrays.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/Volumes/multidim_arrays.c.o -c /build/libminc-2.4.05/volume_io/Volumes/multidim_arrays.c -[ 47%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/input_volume.c.o -[ 48%] Building C object CMakeFiles/minc2.dir/volume_io/Prog_utils/arrays.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/Volumes/input_volume.c.o -MF CMakeFiles/minc2_static.dir/volume_io/Volumes/input_volume.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/Volumes/input_volume.c.o -c /build/libminc-2.4.05/volume_io/Volumes/input_volume.c -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/volume_io/Prog_utils/arrays.c.o -MF CMakeFiles/minc2.dir/volume_io/Prog_utils/arrays.c.o.d -o CMakeFiles/minc2.dir/volume_io/Prog_utils/arrays.c.o -c /build/libminc-2.4.05/volume_io/Prog_utils/arrays.c +[ 45%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/input_free.c.o +/build/libminc-2.4.05/volume_io/MNI_formats/gen_xf_io.c: In function 'output_one_transform': +/build/libminc-2.4.05/volume_io/MNI_formats/gen_xf_io.c:184:74: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 184 | volume_filename = alloc_string( string_length(prefix_filename) + + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ + 185 | 100 ); + | ~~~ +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/Volumes/input_free.c.o -MF CMakeFiles/minc2_static.dir/volume_io/Volumes/input_free.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/Volumes/input_free.c.o -c /build/libminc-2.4.05/volume_io/Volumes/input_free.c In file included from /build/libminc-2.4.05/volume_io/Include/volume_io.h:40, from /build/libminc-2.4.05/volume_io/Include/internal_volume_io.h:29, from /build/libminc-2.4.05/volume_io/Volumes/evaluate.c:19: @@ -3128,18 +3149,14 @@ /build/libminc-2.4.05/volume_io/Volumes/evaluate.c:240:9: note: in expansion of macro 'VIO_FLOOR' 240 | k = VIO_FLOOR( z ); | ^~~~~~~~~ -[ 48%] Building C object CMakeFiles/minc2.dir/volume_io/Prog_utils/files.c.o /build/libminc-2.4.05/volume_io/Volumes/evaluate.c:257:24: warning: conversion from 'VIO_Real' {aka 'double'} to 'unsigned int' may change value [-Wfloat-conversion] 257 | coefs[c] = outside_value; | ^~~~~~~~~~~~~ /build/libminc-2.4.05/volume_io/Volumes/evaluate.c:305:20: warning: conversion from 'VIO_Real' {aka 'double'} to 'int' may change value [-Wfloat-conversion] 305 | out_rgb[i] = c0 + w * dw; | ^~ -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/volume_io/Prog_utils/files.c.o -MF CMakeFiles/minc2.dir/volume_io/Prog_utils/files.c.o.d -o CMakeFiles/minc2.dir/volume_io/Prog_utils/files.c.o -c /build/libminc-2.4.05/volume_io/Prog_utils/files.c -[ 48%] Building C object CMakeFiles/minc2.dir/volume_io/Prog_utils/alloc_check.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/volume_io/Prog_utils/alloc_check.c.o -MF CMakeFiles/minc2.dir/volume_io/Prog_utils/alloc_check.c.o.d -o CMakeFiles/minc2.dir/volume_io/Prog_utils/alloc_check.c.o -c /build/libminc-2.4.05/volume_io/Prog_utils/alloc_check.c -[ 49%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/output_mnc.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/Volumes/output_mnc.c.o -MF CMakeFiles/minc2_static.dir/volume_io/Volumes/output_mnc.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/Volumes/output_mnc.c.o -c /build/libminc-2.4.05/volume_io/Volumes/output_mnc.c +[ 46%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/input_mnc.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/Volumes/input_mnc.c.o -MF CMakeFiles/minc2_static.dir/volume_io/Volumes/input_mnc.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/Volumes/input_mnc.c.o -c /build/libminc-2.4.05/volume_io/Volumes/input_mnc.c /build/libminc-2.4.05/volume_io/Volumes/evaluate.c: In function 'trilinear_interpolate': /build/libminc-2.4.05/volume_io/Include/volume_io/basic.h:110:29: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 110 | #define VIO_FLOOR( x ) ((long) floor(x)) @@ -3171,6 +3188,8 @@ /build/libminc-2.4.05/volume_io/Volumes/evaluate.c:408:13: note: in expansion of macro 'VIO_FLOOR' 408 | m = VIO_FLOOR( v ); | ^~~~~~~~~ +[ 46%] Building C object CMakeFiles/minc2.dir/volume_io/MNI_formats/thin_plate_spline.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/volume_io/MNI_formats/thin_plate_spline.c.o -MF CMakeFiles/minc2.dir/volume_io/MNI_formats/thin_plate_spline.c.o.d -o CMakeFiles/minc2.dir/volume_io/MNI_formats/thin_plate_spline.c.o -c /build/libminc-2.4.05/volume_io/MNI_formats/thin_plate_spline.c /build/libminc-2.4.05/volume_io/Volumes/evaluate.c: In function 'evaluate_volume': /build/libminc-2.4.05/volume_io/Include/volume_io/basic.h:110:29: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 110 | #define VIO_FLOOR( x ) ((long) floor(x)) @@ -3178,6 +3197,20 @@ /build/libminc-2.4.05/volume_io/Volumes/evaluate.c:1010:30: note: in expansion of macro 'VIO_FLOOR' 1010 | start[d] = VIO_FLOOR( pos ); | ^~~~~~~~~ +[ 47%] Building C object CMakeFiles/minc2.dir/volume_io/Prog_utils/alloc.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/volume_io/Prog_utils/alloc.c.o -MF CMakeFiles/minc2.dir/volume_io/Prog_utils/alloc.c.o.d -o CMakeFiles/minc2.dir/volume_io/Prog_utils/alloc.c.o -c /build/libminc-2.4.05/volume_io/Prog_utils/alloc.c +In file included from /build/libminc-2.4.05/volume_io/Include/volume_io.h:40, + from /build/libminc-2.4.05/volume_io/Include/internal_volume_io.h:29, + from /build/libminc-2.4.05/volume_io/MNI_formats/grid_transforms.c:18: +/build/libminc-2.4.05/volume_io/MNI_formats/grid_transforms.c: In function 'evaluate_grid_volume': +/build/libminc-2.4.05/volume_io/Include/volume_io/basic.h:110:29: warning: conversion from 'long int' to 'int' may change value [-Wconversion] + 110 | #define VIO_FLOOR( x ) ((long) floor(x)) + | ^ +/build/libminc-2.4.05/volume_io/MNI_formats/grid_transforms.c:532:24: note: in expansion of macro 'VIO_FLOOR' + 532 | start[d] = VIO_FLOOR( pos ); + | ^~~~~~~~~ +[ 47%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/input_volume.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/Volumes/input_volume.c.o -MF CMakeFiles/minc2_static.dir/volume_io/Volumes/input_volume.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/Volumes/input_volume.c.o -c /build/libminc-2.4.05/volume_io/Volumes/input_volume.c /build/libminc-2.4.05/volume_io/Volumes/input_mnc.c: In function 'initialize_minc_input_from_minc_id': /build/libminc-2.4.05/volume_io/Volumes/input_mnc.c:373:61: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] 373 | irr_starts[d] = malloc(sizeof(VIO_Real) * file->sizes_in_file[d]); @@ -3185,6 +3218,7 @@ /build/libminc-2.4.05/volume_io/Volumes/input_mnc.c:374:61: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] 374 | irr_widths[d] = malloc(sizeof(VIO_Real) * file->sizes_in_file[d]); | ^ +[ 47%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/multidim_arrays.c.o /build/libminc-2.4.05/volume_io/Volumes/input_mnc.c:613:24: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 613 | slab_size *= file->sizes_in_file[d]; | ^~~~ @@ -3197,6 +3231,9 @@ /build/libminc-2.4.05/volume_io/Volumes/input_mnc.c:616:24: note: in expansion of macro 'MIN' 616 | slab_size *= MIN( file->sizes_in_file[d], | ^~~ +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/Volumes/multidim_arrays.c.o -MF CMakeFiles/minc2_static.dir/volume_io/Volumes/multidim_arrays.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/Volumes/multidim_arrays.c.o -c /build/libminc-2.4.05/volume_io/Volumes/multidim_arrays.c +[ 47%] Building C object CMakeFiles/minc2.dir/volume_io/Prog_utils/alloc_check.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/volume_io/Prog_utils/alloc_check.c.o -MF CMakeFiles/minc2.dir/volume_io/Prog_utils/alloc_check.c.o.d -o CMakeFiles/minc2.dir/volume_io/Prog_utils/alloc_check.c.o -c /build/libminc-2.4.05/volume_io/Prog_utils/alloc_check.c In file included from /build/libminc-2.4.05/volume_io/Include/volume_io.h:40, from /build/libminc-2.4.05/volume_io/Include/internal_volume_io.h:29, from /build/libminc-2.4.05/volume_io/Volumes/input_volume.c:20: @@ -3210,42 +3247,51 @@ /build/libminc-2.4.05/volume_io/Volumes/input_volume.c:424:37: note: in expansion of macro 'VIO_ROUND' 424 | VIO_ROUND( (VIO_Real) FACTOR * amount_done)); | ^~~~~~~~~ +[ 48%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/output_mnc.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/Volumes/output_mnc.c.o -MF CMakeFiles/minc2_static.dir/volume_io/Volumes/output_mnc.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/Volumes/output_mnc.c.o -c /build/libminc-2.4.05/volume_io/Volumes/output_mnc.c +[ 49%] Building C object CMakeFiles/minc2.dir/volume_io/Prog_utils/arrays.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/volume_io/Prog_utils/arrays.c.o -MF CMakeFiles/minc2.dir/volume_io/Prog_utils/arrays.c.o.d -o CMakeFiles/minc2.dir/volume_io/Prog_utils/arrays.c.o -c /build/libminc-2.4.05/volume_io/Prog_utils/arrays.c +[ 49%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/output_volume.c.o +[ 49%] Building C object CMakeFiles/minc2.dir/volume_io/Prog_utils/files.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/Volumes/output_volume.c.o -MF CMakeFiles/minc2_static.dir/volume_io/Volumes/output_volume.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/Volumes/output_volume.c.o -c /build/libminc-2.4.05/volume_io/Volumes/output_volume.c +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/volume_io/Prog_utils/files.c.o -MF CMakeFiles/minc2.dir/volume_io/Prog_utils/files.c.o.d -o CMakeFiles/minc2.dir/volume_io/Prog_utils/files.c.o -c /build/libminc-2.4.05/volume_io/Prog_utils/files.c +[ 49%] Building C object CMakeFiles/minc2.dir/volume_io/Prog_utils/print.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/volume_io/Prog_utils/print.c.o -MF CMakeFiles/minc2.dir/volume_io/Prog_utils/print.c.o.d -o CMakeFiles/minc2.dir/volume_io/Prog_utils/print.c.o -c /build/libminc-2.4.05/volume_io/Prog_utils/print.c +[ 50%] Building C object CMakeFiles/minc2.dir/volume_io/Prog_utils/progress.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/volume_io/Prog_utils/progress.c.o -MF CMakeFiles/minc2.dir/volume_io/Prog_utils/progress.c.o.d -o CMakeFiles/minc2.dir/volume_io/Prog_utils/progress.c.o -c /build/libminc-2.4.05/volume_io/Prog_utils/progress.c +[ 51%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/set_hyperslab.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/Volumes/set_hyperslab.c.o -MF CMakeFiles/minc2_static.dir/volume_io/Volumes/set_hyperslab.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/Volumes/set_hyperslab.c.o -c /build/libminc-2.4.05/volume_io/Volumes/set_hyperslab.c +[ 51%] Building C object CMakeFiles/minc2.dir/volume_io/Prog_utils/string.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/volume_io/Prog_utils/string.c.o -MF CMakeFiles/minc2.dir/volume_io/Prog_utils/string.c.o.d -o CMakeFiles/minc2.dir/volume_io/Prog_utils/string.c.o -c /build/libminc-2.4.05/volume_io/Prog_utils/string.c /build/libminc-2.4.05/volume_io/Volumes/output_mnc.c: In function 'add_minc_history': /build/libminc-2.4.05/volume_io/Volumes/output_mnc.c:779:33: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 779 | new_history = alloc_string( old_att_length ); | ^~~~~~~~~~~~~~ -[ 49%] Building C object CMakeFiles/minc2.dir/volume_io/Prog_utils/print.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/volume_io/Prog_utils/print.c.o -MF CMakeFiles/minc2.dir/volume_io/Prog_utils/print.c.o.d -o CMakeFiles/minc2.dir/volume_io/Prog_utils/print.c.o -c /build/libminc-2.4.05/volume_io/Prog_utils/print.c +[ 52%] Building C object CMakeFiles/minc2.dir/volume_io/Prog_utils/time.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/volume_io/Prog_utils/time.c.o -MF CMakeFiles/minc2.dir/volume_io/Prog_utils/time.c.o.d -o CMakeFiles/minc2.dir/volume_io/Prog_utils/time.c.o -c /build/libminc-2.4.05/volume_io/Prog_utils/time.c +[ 52%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/volume_cache.c.o /build/libminc-2.4.05/volume_io/Volumes/output_mnc.c: In function 'output_the_volume': /build/libminc-2.4.05/volume_io/Volumes/output_mnc.c:1473:22: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 1473 | slab_size *= count[d]; | ^~~~~ -[ 50%] Building C object CMakeFiles/minc2.dir/volume_io/Prog_utils/progress.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/volume_io/Prog_utils/progress.c.o -MF CMakeFiles/minc2.dir/volume_io/Prog_utils/progress.c.o.d -o CMakeFiles/minc2.dir/volume_io/Prog_utils/progress.c.o -c /build/libminc-2.4.05/volume_io/Prog_utils/progress.c /build/libminc-2.4.05/volume_io/Prog_utils/files.c: In function 'extract_directory': /build/libminc-2.4.05/volume_io/Prog_utils/files.c:1249:35: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 1249 | directory = alloc_string( slash_index ); | ^~~~~~~~~~~ +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/Volumes/volume_cache.c.o -MF CMakeFiles/minc2_static.dir/volume_io/Volumes/volume_cache.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/Volumes/volume_cache.c.o -c /build/libminc-2.4.05/volume_io/Volumes/volume_cache.c /build/libminc-2.4.05/volume_io/Prog_utils/files.c: In function 'io_quoted_string': +[ 53%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/volumes.c.o /build/libminc-2.4.05/volume_io/Prog_utils/files.c:2445:34: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 2445 | *str = alloc_string( length ); | ^~~~~~ -[ 50%] Building C object CMakeFiles/minc2.dir/volume_io/Prog_utils/string.c.o -[ 50%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/output_volume.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/volume_io/Prog_utils/string.c.o -MF CMakeFiles/minc2.dir/volume_io/Prog_utils/string.c.o.d -o CMakeFiles/minc2.dir/volume_io/Prog_utils/string.c.o -c /build/libminc-2.4.05/volume_io/Prog_utils/string.c -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/Volumes/output_volume.c.o -MF CMakeFiles/minc2_static.dir/volume_io/Volumes/output_volume.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/Volumes/output_volume.c.o -c /build/libminc-2.4.05/volume_io/Volumes/output_volume.c -[ 51%] Building C object CMakeFiles/minc2.dir/volume_io/Prog_utils/time.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/volume_io/Prog_utils/time.c.o -MF CMakeFiles/minc2.dir/volume_io/Prog_utils/time.c.o.d -o CMakeFiles/minc2.dir/volume_io/Prog_utils/time.c.o -c /build/libminc-2.4.05/volume_io/Prog_utils/time.c -[ 51%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/evaluate.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/Volumes/volumes.c.o -MF CMakeFiles/minc2_static.dir/volume_io/Volumes/volumes.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/Volumes/volumes.c.o -c /build/libminc-2.4.05/volume_io/Volumes/volumes.c +[ 53%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/evaluate.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/volume_io/Volumes/evaluate.c.o -MF CMakeFiles/minc2.dir/volume_io/Volumes/evaluate.c.o.d -o CMakeFiles/minc2.dir/volume_io/Volumes/evaluate.c.o -c /build/libminc-2.4.05/volume_io/Volumes/evaluate.c /build/libminc-2.4.05/volume_io/Prog_utils/progress.c: In function 'show_one_line_progress': /build/libminc-2.4.05/volume_io/Prog_utils/progress.c:222:35: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 222 | progress->n_dots_so_far = n_dots; | ^~~~~~ -[ 52%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/set_hyperslab.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/Volumes/set_hyperslab.c.o -MF CMakeFiles/minc2_static.dir/volume_io/Volumes/set_hyperslab.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/Volumes/set_hyperslab.c.o -c /build/libminc-2.4.05/volume_io/Volumes/set_hyperslab.c /build/libminc-2.4.05/volume_io/Prog_utils/string.c: In function 'create_string': -[ 52%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/volume_cache.c.o /build/libminc-2.4.05/volume_io/Prog_utils/string.c:40:25: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 40 | str = alloc_string( string_length(initial) ); | ^~~~~~~~~~~~~~~~~~~~~~ @@ -3253,7 +3299,10 @@ /build/libminc-2.4.05/volume_io/Prog_utils/string.c:235:63: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 235 | stripped = alloc_string( last_non_blank - first_non_blank + 1 ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~ -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/Volumes/volume_cache.c.o -MF CMakeFiles/minc2_static.dir/volume_io/Volumes/volume_cache.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/Volumes/volume_cache.c.o -c /build/libminc-2.4.05/volume_io/Volumes/volume_cache.c +[ 54%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/get_hyperslab.c.o +[ 54%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/input_mnc2.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/volume_io/Volumes/get_hyperslab.c.o -MF CMakeFiles/minc2.dir/volume_io/Volumes/get_hyperslab.c.o.d -o CMakeFiles/minc2.dir/volume_io/Volumes/get_hyperslab.c.o -c /build/libminc-2.4.05/volume_io/Volumes/get_hyperslab.c +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/Volumes/input_mnc2.c.o -MF CMakeFiles/minc2_static.dir/volume_io/Volumes/input_mnc2.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/Volumes/input_mnc2.c.o -c /build/libminc-2.4.05/volume_io/Volumes/input_mnc2.c /build/libminc-2.4.05/volume_io/Prog_utils/time.c: In function 'current_realtime_seconds': /build/libminc-2.4.05/volume_io/Prog_utils/time.c:130:49: warning: conversion from '__syscall_slong_t' {aka 'long int'} to 'double' may change value [-Wconversion] 130 | current_seconds = ts.tv_sec + (ts.tv_nsec / 1.0e9); @@ -3261,6 +3310,45 @@ /build/libminc-2.4.05/volume_io/Prog_utils/time.c:130:35: warning: conversion from '__time_t' {aka 'long int'} to 'double' may change value [-Wconversion] 130 | current_seconds = ts.tv_sec + (ts.tv_nsec / 1.0e9); | ^ +/build/libminc-2.4.05/volume_io/Volumes/volumes.c: In function 'copy_volume_definition_no_alloc': +/build/libminc-2.4.05/volume_io/Volumes/volumes.c:2630:60: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + 2630 | VIO_Real *irr_starts = malloc(sizeof(VIO_Real) * sizes[c]); + | ^ +/build/libminc-2.4.05/volume_io/Volumes/volumes.c:2631:60: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] + 2631 | VIO_Real *irr_widths = malloc(sizeof(VIO_Real) * sizes[c]); + | ^ +/build/libminc-2.4.05/volume_io/Volumes/volumes.c: In function 'copy_volume_new_type': +/build/libminc-2.4.05/volume_io/Volumes/volumes.c:2819:44: warning: conversion from 'double' to 'signed char' may change value [-Wfloat-conversion] + 2819 | ((signed char *) dst)[i] = value; + | ^~~~~ +/build/libminc-2.4.05/volume_io/Volumes/volumes.c:2823:46: warning: conversion from 'double' to 'unsigned char' may change value [-Wfloat-conversion] + 2823 | ((unsigned char *) dst)[i] = value; + | ^~~~~ +/build/libminc-2.4.05/volume_io/Volumes/volumes.c:2829:45: warning: conversion from 'double' to 'short int' may change value [-Wfloat-conversion] + 2829 | ((signed short *) dst)[i] = value; + | ^~~~~ +/build/libminc-2.4.05/volume_io/Volumes/volumes.c:2833:47: warning: conversion from 'double' to 'short unsigned int' may change value [-Wfloat-conversion] + 2833 | ((unsigned short *) dst)[i] = value; + | ^~~~~ +/build/libminc-2.4.05/volume_io/Volumes/volumes.c:2839:43: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] + 2839 | ((signed int *) dst)[i] = value; + | ^~~~~ +/build/libminc-2.4.05/volume_io/Volumes/volumes.c:2843:45: warning: conversion from 'double' to 'unsigned int' may change value [-Wfloat-conversion] + 2843 | ((unsigned int *) dst)[i] = value; + | ^~~~~ +/build/libminc-2.4.05/volume_io/Volumes/volumes.c:2847:34: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] + 2847 | ((float *) dst)[i] = value; + | ^~~~~ +[ 54%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/input_free.c.o +/build/libminc-2.4.05/volume_io/Volumes/volumes.c: In function 'set_volume_irregular_starts': +/build/libminc-2.4.05/volume_io/Volumes/volumes.c:2942:51: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] + 2942 | volume->irregular_starts[idim] = malloc(count * sizeof (VIO_Real)); + | ^ +/build/libminc-2.4.05/volume_io/Volumes/volumes.c: In function 'set_volume_irregular_widths': +/build/libminc-2.4.05/volume_io/Volumes/volumes.c:2975:51: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] + 2975 | volume->irregular_widths[idim] = malloc(count * sizeof (VIO_Real)); + | ^ +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/volume_io/Volumes/input_free.c.o -MF CMakeFiles/minc2.dir/volume_io/Volumes/input_free.c.o.d -o CMakeFiles/minc2.dir/volume_io/Volumes/input_free.c.o -c /build/libminc-2.4.05/volume_io/Volumes/input_free.c In file included from /build/libminc-2.4.05/volume_io/Include/volume_io.h:40, from /build/libminc-2.4.05/volume_io/Include/internal_volume_io.h:29, from /build/libminc-2.4.05/volume_io/Volumes/evaluate.c:19: @@ -3289,6 +3377,7 @@ /build/libminc-2.4.05/volume_io/Volumes/evaluate.c:305:20: warning: conversion from 'VIO_Real' {aka 'double'} to 'int' may change value [-Wfloat-conversion] 305 | out_rgb[i] = c0 + w * dw; | ^~ +[ 55%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/output_mnc2.c.o /build/libminc-2.4.05/volume_io/Volumes/evaluate.c: In function 'trilinear_interpolate': /build/libminc-2.4.05/volume_io/Include/volume_io/basic.h:110:29: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 110 | #define VIO_FLOOR( x ) ((long) floor(x)) @@ -3320,6 +3409,7 @@ /build/libminc-2.4.05/volume_io/Volumes/evaluate.c:408:13: note: in expansion of macro 'VIO_FLOOR' 408 | m = VIO_FLOOR( v ); | ^~~~~~~~~ +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/Volumes/output_mnc2.c.o -MF CMakeFiles/minc2_static.dir/volume_io/Volumes/output_mnc2.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/Volumes/output_mnc2.c.o -c /build/libminc-2.4.05/volume_io/Volumes/output_mnc2.c /build/libminc-2.4.05/volume_io/Volumes/evaluate.c: In function 'evaluate_volume': /build/libminc-2.4.05/volume_io/Include/volume_io/basic.h:110:29: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 110 | #define VIO_FLOOR( x ) ((long) floor(x)) @@ -3327,89 +3417,8 @@ /build/libminc-2.4.05/volume_io/Volumes/evaluate.c:1010:30: note: in expansion of macro 'VIO_FLOOR' 1010 | start[d] = VIO_FLOOR( pos ); | ^~~~~~~~~ -[ 53%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/get_hyperslab.c.o -[ 53%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/input_free.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/volume_io/Volumes/get_hyperslab.c.o -MF CMakeFiles/minc2.dir/volume_io/Volumes/get_hyperslab.c.o.d -o CMakeFiles/minc2.dir/volume_io/Volumes/get_hyperslab.c.o -c /build/libminc-2.4.05/volume_io/Volumes/get_hyperslab.c -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/volume_io/Volumes/input_free.c.o -MF CMakeFiles/minc2.dir/volume_io/Volumes/input_free.c.o.d -o CMakeFiles/minc2.dir/volume_io/Volumes/input_free.c.o -c /build/libminc-2.4.05/volume_io/Volumes/input_free.c -[ 53%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/input_mnc.c.o +[ 55%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/input_mnc.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/volume_io/Volumes/input_mnc.c.o -MF CMakeFiles/minc2.dir/volume_io/Volumes/input_mnc.c.o.d -o CMakeFiles/minc2.dir/volume_io/Volumes/input_mnc.c.o -c /build/libminc-2.4.05/volume_io/Volumes/input_mnc.c -[ 54%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/volumes.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/Volumes/volumes.c.o -MF CMakeFiles/minc2_static.dir/volume_io/Volumes/volumes.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/Volumes/volumes.c.o -c /build/libminc-2.4.05/volume_io/Volumes/volumes.c -[ 55%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/input_volume.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/volume_io/Volumes/input_volume.c.o -MF CMakeFiles/minc2.dir/volume_io/Volumes/input_volume.c.o.d -o CMakeFiles/minc2.dir/volume_io/Volumes/input_volume.c.o -c /build/libminc-2.4.05/volume_io/Volumes/input_volume.c -[ 55%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/input_mnc2.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/Volumes/input_mnc2.c.o -MF CMakeFiles/minc2_static.dir/volume_io/Volumes/input_mnc2.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/Volumes/input_mnc2.c.o -c /build/libminc-2.4.05/volume_io/Volumes/input_mnc2.c -[ 55%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/multidim_arrays.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/volume_io/Volumes/multidim_arrays.c.o -MF CMakeFiles/minc2.dir/volume_io/Volumes/multidim_arrays.c.o.d -o CMakeFiles/minc2.dir/volume_io/Volumes/multidim_arrays.c.o -c /build/libminc-2.4.05/volume_io/Volumes/multidim_arrays.c -/build/libminc-2.4.05/volume_io/Volumes/volumes.c: In function 'copy_volume_definition_no_alloc': -/build/libminc-2.4.05/volume_io/Volumes/volumes.c:2630:60: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - 2630 | VIO_Real *irr_starts = malloc(sizeof(VIO_Real) * sizes[c]); - | ^ -/build/libminc-2.4.05/volume_io/Volumes/volumes.c:2631:60: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] - 2631 | VIO_Real *irr_widths = malloc(sizeof(VIO_Real) * sizes[c]); - | ^ -/build/libminc-2.4.05/volume_io/Volumes/volumes.c: In function 'copy_volume_new_type': -/build/libminc-2.4.05/volume_io/Volumes/volumes.c:2819:44: warning: conversion from 'double' to 'signed char' may change value [-Wfloat-conversion] - 2819 | ((signed char *) dst)[i] = value; - | ^~~~~ -/build/libminc-2.4.05/volume_io/Volumes/volumes.c:2823:46: warning: conversion from 'double' to 'unsigned char' may change value [-Wfloat-conversion] - 2823 | ((unsigned char *) dst)[i] = value; - | ^~~~~ -/build/libminc-2.4.05/volume_io/Volumes/volumes.c:2829:45: warning: conversion from 'double' to 'short int' may change value [-Wfloat-conversion] - 2829 | ((signed short *) dst)[i] = value; - | ^~~~~ -/build/libminc-2.4.05/volume_io/Volumes/volumes.c:2833:47: warning: conversion from 'double' to 'short unsigned int' may change value [-Wfloat-conversion] - 2833 | ((unsigned short *) dst)[i] = value; - | ^~~~~ -/build/libminc-2.4.05/volume_io/Volumes/volumes.c:2839:43: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] - 2839 | ((signed int *) dst)[i] = value; - | ^~~~~ -/build/libminc-2.4.05/volume_io/Volumes/volumes.c:2843:45: warning: conversion from 'double' to 'unsigned int' may change value [-Wfloat-conversion] - 2843 | ((unsigned int *) dst)[i] = value; - | ^~~~~ -/build/libminc-2.4.05/volume_io/Volumes/volumes.c:2847:34: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] - 2847 | ((float *) dst)[i] = value; - | ^~~~~ -/build/libminc-2.4.05/volume_io/Volumes/volumes.c: In function 'set_volume_irregular_starts': -/build/libminc-2.4.05/volume_io/Volumes/volumes.c:2942:51: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] - 2942 | volume->irregular_starts[idim] = malloc(count * sizeof (VIO_Real)); - | ^ -/build/libminc-2.4.05/volume_io/Volumes/volumes.c: In function 'set_volume_irregular_widths': -/build/libminc-2.4.05/volume_io/Volumes/volumes.c:2975:51: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] - 2975 | volume->irregular_widths[idim] = malloc(count * sizeof (VIO_Real)); - | ^ -/build/libminc-2.4.05/volume_io/Volumes/input_mnc.c: In function 'initialize_minc_input_from_minc_id': -/build/libminc-2.4.05/volume_io/Volumes/input_mnc.c:373:61: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] - 373 | irr_starts[d] = malloc(sizeof(VIO_Real) * file->sizes_in_file[d]); - | ^ -/build/libminc-2.4.05/volume_io/Volumes/input_mnc.c:374:61: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] - 374 | irr_widths[d] = malloc(sizeof(VIO_Real) * file->sizes_in_file[d]); - | ^ -/build/libminc-2.4.05/volume_io/Volumes/input_mnc.c:613:24: warning: conversion from 'long int' to 'int' may change value [-Wconversion] - 613 | slab_size *= file->sizes_in_file[d]; - | ^~~~ -In file included from /build/libminc-2.4.05/volume_io/Include/volume_io.h:40, - from /build/libminc-2.4.05/volume_io/Include/internal_volume_io.h:29, - from /build/libminc-2.4.05/volume_io/Volumes/input_mnc.c:21: -/build/libminc-2.4.05/volume_io/Include/volume_io/basic.h:103:23: warning: conversion from 'long int' to 'int' may change value [-Wconversion] - 103 | #define MIN( x, y ) ( ((x) <= (y)) ? (x) : (y) ) - | ^ -/build/libminc-2.4.05/volume_io/Volumes/input_mnc.c:616:24: note: in expansion of macro 'MIN' - 616 | slab_size *= MIN( file->sizes_in_file[d], - | ^~~ -In file included from /build/libminc-2.4.05/volume_io/Include/volume_io.h:40, - from /build/libminc-2.4.05/volume_io/Include/internal_volume_io.h:29, - from /build/libminc-2.4.05/volume_io/Volumes/input_volume.c:20: -/build/libminc-2.4.05/volume_io/Volumes/input_volume.c: In function 'input_volume': -/build/libminc-2.4.05/volume_io/Include/volume_io/basic.h:110:30: warning: conversion from 'long int' to 'int' may change value [-Wconversion] - 110 | #define VIO_FLOOR( x ) ((long) floor(x)) - | ~^~~~~~~~~~~~~~~~ -/build/libminc-2.4.05/volume_io/Include/volume_io/basic.h:112:29: note: in expansion of macro 'VIO_FLOOR' - 112 | #define VIO_ROUND( x ) VIO_FLOOR( (double) (x) + 0.5 ) - | ^~~~~~~~~ -/build/libminc-2.4.05/volume_io/Volumes/input_volume.c:424:37: note: in expansion of macro 'VIO_ROUND' - 424 | VIO_ROUND( (VIO_Real) FACTOR * amount_done)); - | ^~~~~~~~~ /build/libminc-2.4.05/volume_io/Volumes/input_mnc2.c: In function 'initialize_minc_input_from_minc2_id': /build/libminc-2.4.05/volume_io/Volumes/input_mnc2.c:144:42: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 144 | miget_dimension_sizes(file_dims, file->n_file_dimensions, dimension_size); @@ -3435,6 +3444,7 @@ /build/libminc-2.4.05/volume_io/Volumes/input_mnc2.c:182:51: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 182 | miget_slice_range(file->minc2id,slice_start,n_slice_dimensions,&volume_max,&volume_min); | ^~~~~~~~~~~~~~~~~~ +[ 55%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/multidim_arrays.c.o /build/libminc-2.4.05/volume_io/Volumes/input_mnc2.c:203:55: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 203 | miget_slice_range(file->minc2id,slice_start,n_slice_dimensions,&slice_max,&slice_min); | ^~~~~~~~~~~~~~~~~~ @@ -3444,6 +3454,8 @@ /build/libminc-2.4.05/volume_io/Volumes/input_mnc2.c:373:51: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] 373 | irr_widths[d] = malloc(sizeof(VIO_Real) * file->sizes_in_file[d]); | ^ +[ 56%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/input_volume.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/volume_io/Volumes/multidim_arrays.c.o -MF CMakeFiles/minc2.dir/volume_io/Volumes/multidim_arrays.c.o.d -o CMakeFiles/minc2.dir/volume_io/Volumes/multidim_arrays.c.o -c /build/libminc-2.4.05/volume_io/Volumes/multidim_arrays.c /build/libminc-2.4.05/volume_io/Volumes/input_mnc2.c:499:22: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 499 | slab_size *= file->sizes_in_file[d]; | ^~~~ @@ -3451,26 +3463,7 @@ /build/libminc-2.4.05/volume_io/Volumes/input_mnc2.c:707:37: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'long int' may change the sign of the result [-Wsign-conversion] 707 | used_count[n_file_dims] = file->sizes_in_file[n_file_dims]; | ^~~~ -[ 56%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/output_mnc.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/volume_io/Volumes/output_mnc.c.o -MF CMakeFiles/minc2.dir/volume_io/Volumes/output_mnc.c.o.d -o CMakeFiles/minc2.dir/volume_io/Volumes/output_mnc.c.o -c /build/libminc-2.4.05/volume_io/Volumes/output_mnc.c -[ 56%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/output_volume.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/volume_io/Volumes/output_volume.c.o -MF CMakeFiles/minc2.dir/volume_io/Volumes/output_volume.c.o.d -o CMakeFiles/minc2.dir/volume_io/Volumes/output_volume.c.o -c /build/libminc-2.4.05/volume_io/Volumes/output_volume.c -[ 57%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/set_hyperslab.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/volume_io/Volumes/set_hyperslab.c.o -MF CMakeFiles/minc2.dir/volume_io/Volumes/set_hyperslab.c.o.d -o CMakeFiles/minc2.dir/volume_io/Volumes/set_hyperslab.c.o -c /build/libminc-2.4.05/volume_io/Volumes/set_hyperslab.c -/build/libminc-2.4.05/volume_io/Volumes/output_mnc.c: In function 'add_minc_history': -/build/libminc-2.4.05/volume_io/Volumes/output_mnc.c:779:33: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 779 | new_history = alloc_string( old_att_length ); - | ^~~~~~~~~~~~~~ -/build/libminc-2.4.05/volume_io/Volumes/output_mnc.c: In function 'output_the_volume': -/build/libminc-2.4.05/volume_io/Volumes/output_mnc.c:1473:22: warning: conversion from 'long int' to 'int' may change value [-Wconversion] - 1473 | slab_size *= count[d]; - | ^~~~~ -[ 58%] Building C object CMakeFiles/minc2_static.dir/volume_io/Volumes/output_mnc2.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT CMakeFiles/minc2_static.dir/volume_io/Volumes/output_mnc2.c.o -MF CMakeFiles/minc2_static.dir/volume_io/Volumes/output_mnc2.c.o.d -o CMakeFiles/minc2_static.dir/volume_io/Volumes/output_mnc2.c.o -c /build/libminc-2.4.05/volume_io/Volumes/output_mnc2.c -[ 58%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/volume_cache.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/volume_io/Volumes/volume_cache.c.o -MF CMakeFiles/minc2.dir/volume_io/Volumes/volume_cache.c.o.d -o CMakeFiles/minc2.dir/volume_io/Volumes/volume_cache.c.o -c /build/libminc-2.4.05/volume_io/Volumes/volume_cache.c -[ 58%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/volumes.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/volume_io/Volumes/volumes.c.o -MF CMakeFiles/minc2.dir/volume_io/Volumes/volumes.c.o.d -o CMakeFiles/minc2.dir/volume_io/Volumes/volumes.c.o -c /build/libminc-2.4.05/volume_io/Volumes/volumes.c +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/volume_io/Volumes/input_volume.c.o -MF CMakeFiles/minc2.dir/volume_io/Volumes/input_volume.c.o.d -o CMakeFiles/minc2.dir/volume_io/Volumes/input_volume.c.o -c /build/libminc-2.4.05/volume_io/Volumes/input_volume.c /build/libminc-2.4.05/volume_io/Volumes/output_mnc2.c: In function 'output_minc2_hyperslab': /build/libminc-2.4.05/volume_io/Volumes/output_mnc2.c:875:37: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'long int' may change the sign of the result [-Wsign-conversion] 875 | long_file_start[file_ind] = (long) file_start[file_ind]; @@ -3485,8 +3478,58 @@ /build/libminc-2.4.05/volume_io/Volumes/output_mnc2.c:1246:77: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 1246 | miset_slice_range(file->minc2id,(const misize_t*)file_indices,file->n_file_dimensions,real_max,real_min); | ~~~~^~~~~~~~~~~~~~~~~~~ +In file included from /build/libminc-2.4.05/volume_io/Include/volume_io.h:40, + from /build/libminc-2.4.05/volume_io/Include/internal_volume_io.h:29, + from /build/libminc-2.4.05/volume_io/Volumes/input_volume.c:20: +/build/libminc-2.4.05/volume_io/Volumes/input_volume.c: In function 'input_volume': +/build/libminc-2.4.05/volume_io/Include/volume_io/basic.h:110:30: warning: conversion from 'long int' to 'int' may change value [-Wconversion] + 110 | #define VIO_FLOOR( x ) ((long) floor(x)) + | ~^~~~~~~~~~~~~~~~ +/build/libminc-2.4.05/volume_io/Include/volume_io/basic.h:112:29: note: in expansion of macro 'VIO_FLOOR' + 112 | #define VIO_ROUND( x ) VIO_FLOOR( (double) (x) + 0.5 ) + | ^~~~~~~~~ +/build/libminc-2.4.05/volume_io/Volumes/input_volume.c:424:37: note: in expansion of macro 'VIO_ROUND' + 424 | VIO_ROUND( (VIO_Real) FACTOR * amount_done)); + | ^~~~~~~~~ +/build/libminc-2.4.05/volume_io/Volumes/input_mnc.c: In function 'initialize_minc_input_from_minc_id': +/build/libminc-2.4.05/volume_io/Volumes/input_mnc.c:373:61: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] + 373 | irr_starts[d] = malloc(sizeof(VIO_Real) * file->sizes_in_file[d]); + | ^ +/build/libminc-2.4.05/volume_io/Volumes/input_mnc.c:374:61: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] + 374 | irr_widths[d] = malloc(sizeof(VIO_Real) * file->sizes_in_file[d]); + | ^ +/build/libminc-2.4.05/volume_io/Volumes/input_mnc.c:613:24: warning: conversion from 'long int' to 'int' may change value [-Wconversion] + 613 | slab_size *= file->sizes_in_file[d]; + | ^~~~ +In file included from /build/libminc-2.4.05/volume_io/Include/volume_io.h:40, + from /build/libminc-2.4.05/volume_io/Include/internal_volume_io.h:29, + from /build/libminc-2.4.05/volume_io/Volumes/input_mnc.c:21: +/build/libminc-2.4.05/volume_io/Include/volume_io/basic.h:103:23: warning: conversion from 'long int' to 'int' may change value [-Wconversion] + 103 | #define MIN( x, y ) ( ((x) <= (y)) ? (x) : (y) ) + | ^ +/build/libminc-2.4.05/volume_io/Volumes/input_mnc.c:616:24: note: in expansion of macro 'MIN' + 616 | slab_size *= MIN( file->sizes_in_file[d], + | ^~~ +[ 57%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/output_mnc.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/volume_io/Volumes/output_mnc.c.o -MF CMakeFiles/minc2.dir/volume_io/Volumes/output_mnc.c.o.d -o CMakeFiles/minc2.dir/volume_io/Volumes/output_mnc.c.o -c /build/libminc-2.4.05/volume_io/Volumes/output_mnc.c +[ 57%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/output_volume.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/volume_io/Volumes/output_volume.c.o -MF CMakeFiles/minc2.dir/volume_io/Volumes/output_volume.c.o.d -o CMakeFiles/minc2.dir/volume_io/Volumes/output_volume.c.o -c /build/libminc-2.4.05/volume_io/Volumes/output_volume.c +[ 58%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/set_hyperslab.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/volume_io/Volumes/set_hyperslab.c.o -MF CMakeFiles/minc2.dir/volume_io/Volumes/set_hyperslab.c.o.d -o CMakeFiles/minc2.dir/volume_io/Volumes/set_hyperslab.c.o -c /build/libminc-2.4.05/volume_io/Volumes/set_hyperslab.c +[ 58%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/volume_cache.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/volume_io/Volumes/volume_cache.c.o -MF CMakeFiles/minc2.dir/volume_io/Volumes/volume_cache.c.o.d -o CMakeFiles/minc2.dir/volume_io/Volumes/volume_cache.c.o -c /build/libminc-2.4.05/volume_io/Volumes/volume_cache.c +[ 58%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/volumes.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/volume_io/Volumes/volumes.c.o -MF CMakeFiles/minc2.dir/volume_io/Volumes/volumes.c.o.d -o CMakeFiles/minc2.dir/volume_io/Volumes/volumes.c.o -c /build/libminc-2.4.05/volume_io/Volumes/volumes.c [ 59%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/input_mnc2.c.o /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/volume_io/Volumes/input_mnc2.c.o -MF CMakeFiles/minc2.dir/volume_io/Volumes/input_mnc2.c.o.d -o CMakeFiles/minc2.dir/volume_io/Volumes/input_mnc2.c.o -c /build/libminc-2.4.05/volume_io/Volumes/input_mnc2.c +/build/libminc-2.4.05/volume_io/Volumes/output_mnc.c: In function 'add_minc_history': +/build/libminc-2.4.05/volume_io/Volumes/output_mnc.c:779:33: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 779 | new_history = alloc_string( old_att_length ); + | ^~~~~~~~~~~~~~ +/build/libminc-2.4.05/volume_io/Volumes/output_mnc.c: In function 'output_the_volume': +/build/libminc-2.4.05/volume_io/Volumes/output_mnc.c:1473:22: warning: conversion from 'long int' to 'int' may change value [-Wconversion] + 1473 | slab_size *= count[d]; + | ^~~~~ /build/libminc-2.4.05/volume_io/Volumes/volumes.c: In function 'copy_volume_definition_no_alloc': /build/libminc-2.4.05/volume_io/Volumes/volumes.c:2630:60: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 2630 | VIO_Real *irr_starts = malloc(sizeof(VIO_Real) * sizes[c]); @@ -3494,6 +3537,19 @@ /build/libminc-2.4.05/volume_io/Volumes/volumes.c:2631:60: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 2631 | VIO_Real *irr_widths = malloc(sizeof(VIO_Real) * sizes[c]); | ^ +/build/libminc-2.4.05/volume_io/Volumes/input_mnc2.c: In function 'initialize_minc_input_from_minc2_id': +/build/libminc-2.4.05/volume_io/Volumes/input_mnc2.c:144:42: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 144 | miget_dimension_sizes(file_dims, file->n_file_dimensions, dimension_size); + | ~~~~^~~~~~~~~~~~~~~~~~~ +/build/libminc-2.4.05/volume_io/Volumes/input_mnc2.c:145:63: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 145 | miget_dimension_separations(file_dims, MI_ORDER_FILE, file->n_file_dimensions, file_step); + | ~~~~^~~~~~~~~~~~~~~~~~~ +/build/libminc-2.4.05/volume_io/Volumes/input_mnc2.c:146:58: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 146 | miget_dimension_starts(file_dims, MI_ORDER_FILE, file->n_file_dimensions, file_start); + | ~~~~^~~~~~~~~~~~~~~~~~~ +/build/libminc-2.4.05/volume_io/Volumes/input_mnc2.c:153:32: warning: conversion to 'long int' from 'misize_t' {aka 'long long unsigned int'} may change the sign of the result [-Wsign-conversion] + 153 | file->sizes_in_file[d] = dimension_size[d]; + | ^~~~~~~~~~~~~~ /build/libminc-2.4.05/volume_io/Volumes/volumes.c: In function 'copy_volume_new_type': /build/libminc-2.4.05/volume_io/Volumes/volumes.c:2819:44: warning: conversion from 'double' to 'signed char' may change value [-Wfloat-conversion] 2819 | ((signed char *) dst)[i] = value; @@ -3501,15 +3557,30 @@ /build/libminc-2.4.05/volume_io/Volumes/volumes.c:2823:46: warning: conversion from 'double' to 'unsigned char' may change value [-Wfloat-conversion] 2823 | ((unsigned char *) dst)[i] = value; | ^~~~~ +/build/libminc-2.4.05/volume_io/Volumes/input_mnc2.c:179:21: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 179 | slices_count*=dimension_size[d]; + | ^~ +/build/libminc-2.4.05/volume_io/Volumes/input_mnc2.c:179:23: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] + 179 | slices_count*=dimension_size[d]; + | ^~~~~~~~~~~~~~ /build/libminc-2.4.05/volume_io/Volumes/volumes.c:2829:45: warning: conversion from 'double' to 'short int' may change value [-Wfloat-conversion] 2829 | ((signed short *) dst)[i] = value; | ^~~~~ +/build/libminc-2.4.05/volume_io/Volumes/input_mnc2.c:181:38: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 181 | slice_start=(misize_t *)calloc(n_slice_dimensions,sizeof(misize_t)); + | ^~~~~~~~~~~~~~~~~~ /build/libminc-2.4.05/volume_io/Volumes/volumes.c:2833:47: warning: conversion from 'double' to 'short unsigned int' may change value [-Wfloat-conversion] 2833 | ((unsigned short *) dst)[i] = value; | ^~~~~ +/build/libminc-2.4.05/volume_io/Volumes/input_mnc2.c:182:51: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 182 | miget_slice_range(file->minc2id,slice_start,n_slice_dimensions,&volume_max,&volume_min); + | ^~~~~~~~~~~~~~~~~~ /build/libminc-2.4.05/volume_io/Volumes/volumes.c:2839:43: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] 2839 | ((signed int *) dst)[i] = value; | ^~~~~ +/build/libminc-2.4.05/volume_io/Volumes/input_mnc2.c:203:55: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 203 | miget_slice_range(file->minc2id,slice_start,n_slice_dimensions,&slice_max,&slice_min); + | ^~~~~~~~~~~~~~~~~~ /build/libminc-2.4.05/volume_io/Volumes/volumes.c:2843:45: warning: conversion from 'double' to 'unsigned int' may change value [-Wfloat-conversion] 2843 | ((unsigned int *) dst)[i] = value; | ^~~~~ @@ -3524,36 +3595,6 @@ /build/libminc-2.4.05/volume_io/Volumes/volumes.c:2975:51: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] 2975 | volume->irregular_widths[idim] = malloc(count * sizeof (VIO_Real)); | ^ -[ 59%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/output_mnc2.c.o -/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/volume_io/Volumes/output_mnc2.c.o -MF CMakeFiles/minc2.dir/volume_io/Volumes/output_mnc2.c.o.d -o CMakeFiles/minc2.dir/volume_io/Volumes/output_mnc2.c.o -c /build/libminc-2.4.05/volume_io/Volumes/output_mnc2.c -/build/libminc-2.4.05/volume_io/Volumes/input_mnc2.c: In function 'initialize_minc_input_from_minc2_id': -/build/libminc-2.4.05/volume_io/Volumes/input_mnc2.c:144:42: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 144 | miget_dimension_sizes(file_dims, file->n_file_dimensions, dimension_size); - | ~~~~^~~~~~~~~~~~~~~~~~~ -/build/libminc-2.4.05/volume_io/Volumes/input_mnc2.c:145:63: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 145 | miget_dimension_separations(file_dims, MI_ORDER_FILE, file->n_file_dimensions, file_step); - | ~~~~^~~~~~~~~~~~~~~~~~~ -/build/libminc-2.4.05/volume_io/Volumes/input_mnc2.c:146:58: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 146 | miget_dimension_starts(file_dims, MI_ORDER_FILE, file->n_file_dimensions, file_start); - | ~~~~^~~~~~~~~~~~~~~~~~~ -/build/libminc-2.4.05/volume_io/Volumes/input_mnc2.c:153:32: warning: conversion to 'long int' from 'misize_t' {aka 'long long unsigned int'} may change the sign of the result [-Wsign-conversion] - 153 | file->sizes_in_file[d] = dimension_size[d]; - | ^~~~~~~~~~~~~~ -/build/libminc-2.4.05/volume_io/Volumes/input_mnc2.c:179:21: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 179 | slices_count*=dimension_size[d]; - | ^~ -/build/libminc-2.4.05/volume_io/Volumes/input_mnc2.c:179:23: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'int' may change value [-Wconversion] - 179 | slices_count*=dimension_size[d]; - | ^~~~~~~~~~~~~~ -/build/libminc-2.4.05/volume_io/Volumes/input_mnc2.c:181:38: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 181 | slice_start=(misize_t *)calloc(n_slice_dimensions,sizeof(misize_t)); - | ^~~~~~~~~~~~~~~~~~ -/build/libminc-2.4.05/volume_io/Volumes/input_mnc2.c:182:51: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 182 | miget_slice_range(file->minc2id,slice_start,n_slice_dimensions,&volume_max,&volume_min); - | ^~~~~~~~~~~~~~~~~~ -/build/libminc-2.4.05/volume_io/Volumes/input_mnc2.c:203:55: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 203 | miget_slice_range(file->minc2id,slice_start,n_slice_dimensions,&slice_max,&slice_min); - | ^~~~~~~~~~~~~~~~~~ /build/libminc-2.4.05/volume_io/Volumes/input_mnc2.c:372:51: warning: conversion to 'long unsigned int' from 'long int' may change the sign of the result [-Wsign-conversion] 372 | irr_starts[d] = malloc(sizeof(VIO_Real) * file->sizes_in_file[d]); | ^ @@ -3567,6 +3608,8 @@ /build/libminc-2.4.05/volume_io/Volumes/input_mnc2.c:707:37: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'long int' may change the sign of the result [-Wsign-conversion] 707 | used_count[n_file_dims] = file->sizes_in_file[n_file_dims]; | ^~~~ +[ 59%] Building C object CMakeFiles/minc2.dir/volume_io/Volumes/output_mnc2.c.o +/usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc2_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT CMakeFiles/minc2.dir/volume_io/Volumes/output_mnc2.c.o -MF CMakeFiles/minc2.dir/volume_io/Volumes/output_mnc2.c.o.d -o CMakeFiles/minc2.dir/volume_io/Volumes/output_mnc2.c.o -c /build/libminc-2.4.05/volume_io/Volumes/output_mnc2.c /build/libminc-2.4.05/volume_io/Volumes/output_mnc2.c: In function 'output_minc2_hyperslab': /build/libminc-2.4.05/volume_io/Volumes/output_mnc2.c:875:37: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'long int' may change the sign of the result [-Wsign-conversion] 875 | long_file_start[file_ind] = (long) file_start[file_ind]; @@ -3581,16 +3624,16 @@ /build/libminc-2.4.05/volume_io/Volumes/output_mnc2.c:1246:77: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 1246 | miset_slice_range(file->minc2id,(const misize_t*)file_indices,file->n_file_dimensions,real_max,real_min); | ~~~~^~~~~~~~~~~~~~~~~~~ -[ 60%] Linking C shared library libminc2.so -/usr/bin/cmake -E cmake_link_script CMakeFiles/minc2.dir/link.txt --verbose=1 -/usr/bin/cc -fPIC -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libminc2.so.5.3.0 -o libminc2.so.5.3.0 CMakeFiles/minc2.dir/libsrc2/convert.c.o CMakeFiles/minc2.dir/libsrc2/datatype.c.o 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'/build/libminc-2.4.05/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' -make -f ezminc/CMakeFiles/minc_io.dir/build.make ezminc/CMakeFiles/minc_io.dir/build make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' -make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' -cd /build/libminc-2.4.05/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.05 /build/libminc-2.4.05/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/CMakeFiles/minc_long_attr.dir/DependInfo.cmake --color= -make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' +make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' +make -f ezminc/CMakeFiles/minc_io.dir/build.make ezminc/CMakeFiles/minc_io.dir/build make -f testdir/CMakeFiles/minc_tst.dir/build.make testdir/CMakeFiles/minc_tst.dir/build -make -f testdir/CMakeFiles/icv_vec.dir/build.make testdir/CMakeFiles/icv_vec.dir/build +make -f testdir/CMakeFiles/icv.dir/build.make testdir/CMakeFiles/icv.dir/build make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' make -f testdir/CMakeFiles/icv_dim1.dir/build.make testdir/CMakeFiles/icv_dim1.dir/build -make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' make -f testdir/CMakeFiles/icv_dim.dir/build.make testdir/CMakeFiles/icv_dim.dir/build make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' -make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' -make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' -make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' -make -f testdir/CMakeFiles/icv.dir/build.make testdir/CMakeFiles/icv.dir/build -make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' -make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' +cd /build/libminc-2.4.05/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.05 /build/libminc-2.4.05/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/CMakeFiles/minc_long_attr.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' make -f testdir/CMakeFiles/icv_fillvalue.dir/build.make testdir/CMakeFiles/icv_fillvalue.dir/build make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' make -f testdir/CMakeFiles/icv_range.dir/build.make testdir/CMakeFiles/icv_range.dir/build -make -f testdir/CMakeFiles/mincapi.dir/build.make testdir/CMakeFiles/mincapi.dir/build -[ 60%] Building CXX object ezminc/CMakeFiles/minc_io.dir/minc_1_rw.cpp.o make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' -[ 61%] Building CXX object ezminc/CMakeFiles/minc_io.dir/minc_1_simple_rw.cpp.o -[ 61%] Building C object testdir/CMakeFiles/minc_tst.dir/minc.c.o -make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' -cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/ezminc && /usr/bin/c++ -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc_io_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time 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-I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/icv_vec.dir/icv_vec.c.o -MF CMakeFiles/icv_vec.dir/icv_vec.c.o.d -o CMakeFiles/icv_vec.dir/icv_vec.c.o -c /build/libminc-2.4.05/testdir/icv_vec.c -make -f testdir/CMakeFiles/minc_long_attr.dir/build.make testdir/CMakeFiles/minc_long_attr.dir/build -cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat 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CMakeFiles/minc_io.dir/minc_1_simple_rw.cpp.o -c /build/libminc-2.4.05/ezminc/minc_1_simple_rw.cpp make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' +make -f testdir/CMakeFiles/mincapi.dir/build.make testdir/CMakeFiles/mincapi.dir/build make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' -cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/minc_tst.dir/minc.c.o -MF CMakeFiles/minc_tst.dir/minc.c.o.d -o CMakeFiles/minc_tst.dir/minc.c.o -c /build/libminc-2.4.05/testdir/minc.c make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' +make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' +make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' +make -f testdir/CMakeFiles/icv_vec.dir/build.make testdir/CMakeFiles/icv_vec.dir/build make -f testdir/CMakeFiles/minc_conversion.dir/build.make testdir/CMakeFiles/minc_conversion.dir/depend -[ 62%] Building C object testdir/CMakeFiles/icv_dim.dir/icv_dim.c.o -cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/icv_dim.dir/icv_dim.c.o -MF CMakeFiles/icv_dim.dir/icv_dim.c.o.d -o CMakeFiles/icv_dim.dir/icv_dim.c.o -c /build/libminc-2.4.05/testdir/icv_dim.c make -f testdir/CMakeFiles/volume_test.dir/build.make testdir/CMakeFiles/volume_test.dir/depend make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' +make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' cd /build/libminc-2.4.05/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.05 /build/libminc-2.4.05/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/CMakeFiles/minc_conversion.dir/DependInfo.cmake --color= -[ 62%] Building C object testdir/CMakeFiles/icv.dir/icv.c.o -[ 63%] Building C object testdir/CMakeFiles/icv_range.dir/icv_range.c.o -[ 63%] Building C object testdir/CMakeFiles/minc_types.dir/minc_types.c.o -[ 63%] Building C object testdir/CMakeFiles/mincapi.dir/mincapi.c.o -cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/minc_types.dir/minc_types.c.o -MF CMakeFiles/minc_types.dir/minc_types.c.o.d -o CMakeFiles/minc_types.dir/minc_types.c.o -c /build/libminc-2.4.05/testdir/minc_types.c +make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' cd /build/libminc-2.4.05/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.05 /build/libminc-2.4.05/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/CMakeFiles/volume_test.dir/DependInfo.cmake --color= +make -f testdir/CMakeFiles/test_mconv.dir/build.make testdir/CMakeFiles/test_mconv.dir/build +make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' +make -f testdir/CMakeFiles/minc_types.dir/build.make testdir/CMakeFiles/minc_types.dir/build +make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' +[ 60%] Building CXX object ezminc/CMakeFiles/minc_io.dir/minc_1_rw.cpp.o +[ 60%] Building C object testdir/CMakeFiles/icv.dir/icv.c.o +[ 60%] Building C object testdir/CMakeFiles/icv_dim1.dir/icv_dim1.c.o +cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/ezminc && /usr/bin/c++ -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2 -DMINC2=1 -D_XOPEN_SOURCE=500 -Dminc_io_EXPORTS -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT ezminc/CMakeFiles/minc_io.dir/minc_1_rw.cpp.o -MF CMakeFiles/minc_io.dir/minc_1_rw.cpp.o.d -o CMakeFiles/minc_io.dir/minc_1_rw.cpp.o -c /build/libminc-2.4.05/ezminc/minc_1_rw.cpp cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 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-I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/icv_dim1.dir/icv_dim1.c.o -MF CMakeFiles/icv_dim1.dir/icv_dim1.c.o.d -o CMakeFiles/icv_dim1.dir/icv_dim1.c.o -c /build/libminc-2.4.05/testdir/icv_dim1.c +[ 60%] Building C object testdir/CMakeFiles/icv_dim.dir/icv_dim.c.o +make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' +[ 61%] Building CXX object ezminc/CMakeFiles/minc_io.dir/minc_1_simple_rw.cpp.o +[ 62%] Building C object testdir/CMakeFiles/icv_range.dir/icv_range.c.o +make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' +cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/minc_tst.dir/minc.c.o -MF CMakeFiles/minc_tst.dir/minc.c.o.d -o CMakeFiles/minc_tst.dir/minc.c.o -c /build/libminc-2.4.05/testdir/minc.c +make -f testdir/CMakeFiles/multidim_test.dir/build.make testdir/CMakeFiles/multidim_test.dir/depend +cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc 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-I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -fPIC -MD -MT ezminc/CMakeFiles/minc_io.dir/minc_1_simple_rw.cpp.o -MF CMakeFiles/minc_io.dir/minc_1_simple_rw.cpp.o.d -o CMakeFiles/minc_io.dir/minc_1_simple_rw.cpp.o -c /build/libminc-2.4.05/ezminc/minc_1_simple_rw.cpp +[ 63%] Building C object testdir/CMakeFiles/icv_fillvalue.dir/icv_fillvalue.c.o cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc 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CMakeFiles/minc_long_attr.dir/minc_long_attr.c.o -c /build/libminc-2.4.05/testdir/minc_long_attr.c +cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/icv_vec.dir/icv_vec.c.o -MF CMakeFiles/icv_vec.dir/icv_vec.c.o.d -o CMakeFiles/icv_vec.dir/icv_vec.c.o -c /build/libminc-2.4.05/testdir/icv_vec.c +[ 65%] Building C object testdir/CMakeFiles/mincapi.dir/mincapi.c.o make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' -make -f testdir/CMakeFiles/minc_conversion.dir/build.make testdir/CMakeFiles/minc_conversion.dir/build +make -f testdir/CMakeFiles/volume_test.dir/build.make testdir/CMakeFiles/volume_test.dir/build +cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/mincapi.dir/mincapi.c.o -MF CMakeFiles/mincapi.dir/mincapi.c.o.d -o CMakeFiles/mincapi.dir/mincapi.c.o -c /build/libminc-2.4.05/testdir/mincapi.c +[ 65%] Building C object testdir/CMakeFiles/minc_types.dir/minc_types.c.o make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' -make -f testdir/CMakeFiles/volume_test.dir/build.make testdir/CMakeFiles/volume_test.dir/build +cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/minc_types.dir/minc_types.c.o -MF CMakeFiles/minc_types.dir/minc_types.c.o.d -o CMakeFiles/minc_types.dir/minc_types.c.o -c /build/libminc-2.4.05/testdir/minc_types.c +[ 66%] Building C object testdir/CMakeFiles/minc_long_attr.dir/minc_long_attr.c.o +make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' +cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/minc_long_attr.dir/minc_long_attr.c.o -MF CMakeFiles/minc_long_attr.dir/minc_long_attr.c.o.d -o CMakeFiles/minc_long_attr.dir/minc_long_attr.c.o -c /build/libminc-2.4.05/testdir/minc_long_attr.c +make -f testdir/CMakeFiles/multidim_test.dir/build.make testdir/CMakeFiles/multidim_test.dir/build +make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' +make -f testdir/CMakeFiles/minc_conversion.dir/build.make testdir/CMakeFiles/minc_conversion.dir/build make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' +[ 66%] Building C object testdir/CMakeFiles/volume_test.dir/volume_test.c.o +cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/volume_test.dir/volume_test.c.o -MF CMakeFiles/volume_test.dir/volume_test.c.o.d -o CMakeFiles/volume_test.dir/volume_test.c.o -c /build/libminc-2.4.05/testdir/volume_test.c +[ 66%] Building C object testdir/CMakeFiles/minc_conversion.dir/minc_conversion.c.o +cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/minc_conversion.dir/minc_conversion.c.o -MF CMakeFiles/minc_conversion.dir/minc_conversion.c.o.d -o CMakeFiles/minc_conversion.dir/minc_conversion.c.o -c /build/libminc-2.4.05/testdir/minc_conversion.c +[ 66%] Building C object testdir/CMakeFiles/multidim_test.dir/multidim_test.c.o /build/libminc-2.4.05/testdir/minc.c: In function 'main': /build/libminc-2.4.05/testdir/minc.c:60:15: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 60 | ioff=(j*count[1]+i)*count[2]; | ^ -[ 66%] Building C object testdir/CMakeFiles/minc_conversion.dir/minc_conversion.c.o -cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/minc_conversion.dir/minc_conversion.c.o -MF CMakeFiles/minc_conversion.dir/minc_conversion.c.o.d -o CMakeFiles/minc_conversion.dir/minc_conversion.c.o -c /build/libminc-2.4.05/testdir/minc_conversion.c -[ 66%] Building C object testdir/CMakeFiles/volume_test.dir/volume_test.c.o -cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/volume_test.dir/volume_test.c.o -MF CMakeFiles/volume_test.dir/volume_test.c.o.d -o CMakeFiles/volume_test.dir/volume_test.c.o -c /build/libminc-2.4.05/testdir/volume_test.c +cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/multidim_test.dir/multidim_test.c.o -MF CMakeFiles/multidim_test.dir/multidim_test.c.o.d -o CMakeFiles/multidim_test.dir/multidim_test.c.o -c /build/libminc-2.4.05/testdir/multidim_test.c /build/libminc-2.4.05/testdir/icv_vec.c: In function 'test_icv_vector': /build/libminc-2.4.05/testdir/icv_vec.c:65:41: warning: conversion to 'long unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 65 | short int *ivalue = malloc(N_ELEMENTS * sizeof(short int)); @@ -3725,9 +3776,6 @@ /build/libminc-2.4.05/testdir/icv_vec.c:126:23: note: in expansion of macro 'TVAL' 126 | ivalue[c] = TVAL(i, j, k, v); | ^~~~ -[ 67%] Linking C executable minc_types -[ 68%] Linking C executable minc_tst -cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc_types.dir/link.txt --verbose=1 /build/libminc-2.4.05/testdir/mincapi.c: In function 'test3': /build/libminc-2.4.05/testdir/mincapi.c:209:11: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 209 | total *= dims[i].length; @@ -3739,7 +3787,6 @@ /build/libminc-2.4.05/testdir/mincapi.c:352:21: warning: conversion from 'int' to 'float' may change value [-Wconversion] 352 | float tmp = (i * 10000) + (j * 100) + k; | ^ -cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc_tst.dir/link.txt --verbose=1 /build/libminc-2.4.05/testdir/mincapi.c: In function 'test5': /build/libminc-2.4.05/testdir/mincapi.c:409:9: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 409 | total *= dims[TST_X].length; @@ -3758,6 +3805,8 @@ /build/libminc-2.4.05/testdir/mincapi.c:799:10: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 799 | return (errors); | ^ +[ 66%] Linking C executable test_mconv +cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_mconv.dir/link.txt --verbose=1 /build/libminc-2.4.05/testdir/minc_long_attr.c: In function 'test1': /build/libminc-2.4.05/testdir/minc_long_attr.c:125:32: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 125 | ip->large_attribute=calloc(ip->attribute_size,sizeof(char)); @@ -3765,6 +3814,7 @@ /build/libminc-2.4.05/testdir/minc_long_attr.c:126:52: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 126 | memset(ip->large_attribute,'X',ip->attribute_size-1); | ~~~~~~~~~~~~~~~~~~^~ +[ 67%] Linking C executable minc_tst /build/libminc-2.4.05/testdir/minc_long_attr.c: In function 'test3': /build/libminc-2.4.05/testdir/minc_long_attr.c:207:11: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 207 | total *= dims[i].length; @@ -3779,18 +3829,13 @@ /build/libminc-2.4.05/testdir/minc_long_attr.c:298:10: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 298 | return (errors); | ^ -/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/minc_tst.dir/minc.c.o -o minc_tst -Wl,-rpath,/build/libminc-2.4.05/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.3.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libz.so -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/lib/x86_64-linux-gnu/libdl.a -lm -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so -[ 69%] Linking C executable icv_dim -cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/icv_dim.dir/link.txt --verbose=1 -[ 70%] Linking C executable icv -[ 70%] Linking C executable icv_fillvalue +/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/test_mconv.dir/test_mconv.c.o -o test_mconv -Wl,-rpath,/build/libminc-2.4.05/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.3.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libz.so -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/lib/x86_64-linux-gnu/libdl.a -lm -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so +cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc_tst.dir/link.txt --verbose=1 +[ 68%] Linking C executable icv cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/icv.dir/link.txt --verbose=1 +[ 68%] Linking C executable icv_fillvalue cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/icv_fillvalue.dir/link.txt --verbose=1 -/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/minc_types.dir/minc_types.c.o -o minc_types -Wl,-rpath,/build/libminc-2.4.05/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.3.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libz.so -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/lib/x86_64-linux-gnu/libdl.a -lm -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so -[ 70%] Linking C executable icv_dim1 -cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/icv_dim1.dir/link.txt --verbose=1 -/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/icv_dim.dir/icv_dim.c.o -o icv_dim -Wl,-rpath,/build/libminc-2.4.05/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.3.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libz.so -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/lib/x86_64-linux-gnu/libdl.a -lm -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so -/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/icv.dir/icv.c.o -o icv -Wl,-rpath,/build/libminc-2.4.05/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.3.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libz.so -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/lib/x86_64-linux-gnu/libdl.a -lm -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so +/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/minc_tst.dir/minc.c.o -o minc_tst -Wl,-rpath,/build/libminc-2.4.05/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.3.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libz.so -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/lib/x86_64-linux-gnu/libdl.a -lm -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /build/libminc-2.4.05/testdir/minc_conversion.c: In function 'test2': /build/libminc-2.4.05/testdir/minc_conversion.c:163:24: warning: conversion from 'int' to 'float' may change value [-Wconversion] 163 | float tmp = (i * 10000.0f) + (j * 100.0f) + k; @@ -3814,6 +3859,7 @@ /build/libminc-2.4.05/testdir/minc_conversion.c:272:51: warning: conversion from 'int' to 'float' may change value [-Wconversion] 272 | float tmp = (i * 10000.0f) + (j * 100.0f) + k; | ^ +[ 68%] Linking C executable icv_dim1 /build/libminc-2.4.05/testdir/minc_conversion.c: In function 'test4': /build/libminc-2.4.05/testdir/minc_conversion.c:377:21: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'float' may change value [-Wconversion] 377 | float tmp = (i * 10000) + (j * 100) + k; @@ -3822,124 +3868,74 @@ /build/libminc-2.4.05/testdir/minc_conversion.c:423:10: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 423 | return (errors); | ^ +cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/icv_dim1.dir/link.txt --verbose=1 +/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/icv.dir/icv.c.o -o icv -Wl,-rpath,/build/libminc-2.4.05/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.3.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libz.so -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/lib/x86_64-linux-gnu/libdl.a -lm -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/icv_dim1.dir/icv_dim1.c.o -o icv_dim1 -Wl,-rpath,/build/libminc-2.4.05/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.3.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libz.so -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/lib/x86_64-linux-gnu/libdl.a -lm -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so -[ 70%] Linking C executable test_mconv -/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/icv_fillvalue.dir/icv_fillvalue.c.o -o icv_fillvalue -Wl,-rpath,/build/libminc-2.4.05/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.3.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libz.so -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/lib/x86_64-linux-gnu/libdl.a -lm -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so -cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_mconv.dir/link.txt --verbose=1 -/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/test_mconv.dir/test_mconv.c.o -o test_mconv -Wl,-rpath,/build/libminc-2.4.05/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.3.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libz.so -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/lib/x86_64-linux-gnu/libdl.a -lm -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so -[ 70%] Linking C executable icv_range +[ 68%] Linking C executable icv_range cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/icv_range.dir/link.txt --verbose=1 +/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/icv_fillvalue.dir/icv_fillvalue.c.o -o icv_fillvalue -Wl,-rpath,/build/libminc-2.4.05/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.3.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libz.so -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/lib/x86_64-linux-gnu/libdl.a -lm -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so +[ 69%] Linking C executable minc_types +cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc_types.dir/link.txt --verbose=1 +/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/icv_range.dir/icv_range.c.o -o icv_range -Wl,-rpath,/build/libminc-2.4.05/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.3.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libz.so -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/lib/x86_64-linux-gnu/libdl.a -lm -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so +[ 70%] Linking C executable icv_dim +cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/icv_dim.dir/link.txt --verbose=1 +/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/minc_types.dir/minc_types.c.o -o minc_types -Wl,-rpath,/build/libminc-2.4.05/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.3.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libz.so -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/lib/x86_64-linux-gnu/libdl.a -lm -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so +/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/icv_dim.dir/icv_dim.c.o -o icv_dim -Wl,-rpath,/build/libminc-2.4.05/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.3.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libz.so -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/lib/x86_64-linux-gnu/libdl.a -lm -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so [ 70%] Linking C executable minc_long_attr cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc_long_attr.dir/link.txt --verbose=1 -/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/icv_range.dir/icv_range.c.o -o icv_range -Wl,-rpath,/build/libminc-2.4.05/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.3.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libz.so -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/lib/x86_64-linux-gnu/libdl.a -lm -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/minc_long_attr.dir/minc_long_attr.c.o -o minc_long_attr -Wl,-rpath,/build/libminc-2.4.05/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.3.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libz.so -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/lib/x86_64-linux-gnu/libdl.a -lm -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so -[ 70%] Linking C executable icv_vec -make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' -cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/icv_vec.dir/link.txt --verbose=1 -/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/icv_vec.dir/icv_vec.c.o -o icv_vec -Wl,-rpath,/build/libminc-2.4.05/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.3.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libz.so -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/lib/x86_64-linux-gnu/libdl.a -lm -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so -[ 70%] Built target minc_tst -make -f testdir/CMakeFiles/multidim_test.dir/build.make testdir/CMakeFiles/multidim_test.dir/depend -make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' -cd /build/libminc-2.4.05/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.05 /build/libminc-2.4.05/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/CMakeFiles/multidim_test.dir/DependInfo.cmake --color= [ 71%] Linking C executable minc_conversion cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc_conversion.dir/link.txt --verbose=1 +[ 71%] Linking C executable icv_vec +cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/icv_vec.dir/link.txt --verbose=1 make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' -make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' +/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/icv_vec.dir/icv_vec.c.o -o icv_vec -Wl,-rpath,/build/libminc-2.4.05/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.3.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libz.so -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/lib/x86_64-linux-gnu/libdl.a -lm -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/minc_conversion.dir/minc_conversion.c.o -o minc_conversion -Wl,-rpath,/build/libminc-2.4.05/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.3.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libz.so -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/lib/x86_64-linux-gnu/libdl.a -lm -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so -make -f testdir/CMakeFiles/multidim_test.dir/build.make testdir/CMakeFiles/multidim_test.dir/build -make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' -[ 71%] Built target icv_dim +[ 71%] Built target minc_tst make -f testdir/CMakeFiles/test_xfm.dir/build.make testdir/CMakeFiles/test_xfm.dir/depend make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' cd /build/libminc-2.4.05/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.05 /build/libminc-2.4.05/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/CMakeFiles/test_xfm.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' -[ 71%] Building C object testdir/CMakeFiles/multidim_test.dir/multidim_test.c.o -cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/multidim_test.dir/multidim_test.c.o -MF CMakeFiles/multidim_test.dir/multidim_test.c.o.d -o CMakeFiles/multidim_test.dir/multidim_test.c.o -c /build/libminc-2.4.05/testdir/multidim_test.c -make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' -make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' make -f testdir/CMakeFiles/test_xfm.dir/build.make testdir/CMakeFiles/test_xfm.dir/build make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' -[ 71%] Built target icv_fillvalue -[ 71%] Built target test_mconv -make -f testdir/CMakeFiles/copy_xfm.dir/build.make testdir/CMakeFiles/copy_xfm.dir/depend -make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' -cd /build/libminc-2.4.05/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.05 /build/libminc-2.4.05/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/CMakeFiles/copy_xfm.dir/DependInfo.cmake --color= -make -f testdir/CMakeFiles/create_grid_xfm.dir/build.make testdir/CMakeFiles/create_grid_xfm.dir/depend -make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' -cd /build/libminc-2.4.05/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.05 /build/libminc-2.4.05/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/CMakeFiles/create_grid_xfm.dir/DependInfo.cmake --color= [ 72%] Building C object testdir/CMakeFiles/test_xfm.dir/vio_xfm_test/test-xfm.c.o cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/test_xfm.dir/vio_xfm_test/test-xfm.c.o -MF CMakeFiles/test_xfm.dir/vio_xfm_test/test-xfm.c.o.d -o CMakeFiles/test_xfm.dir/vio_xfm_test/test-xfm.c.o -c /build/libminc-2.4.05/testdir/vio_xfm_test/test-xfm.c +[ 73%] Linking C executable mincapi make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' -make -f testdir/CMakeFiles/copy_xfm.dir/build.make testdir/CMakeFiles/copy_xfm.dir/build -make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' -make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' -make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' -make -f testdir/CMakeFiles/create_grid_xfm.dir/build.make testdir/CMakeFiles/create_grid_xfm.dir/build -[ 72%] Building C object testdir/CMakeFiles/copy_xfm.dir/vio_xfm_test/copy-xfm.c.o -cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/copy_xfm.dir/vio_xfm_test/copy-xfm.c.o -MF CMakeFiles/copy_xfm.dir/vio_xfm_test/copy-xfm.c.o.d -o CMakeFiles/copy_xfm.dir/vio_xfm_test/copy-xfm.c.o -c /build/libminc-2.4.05/testdir/vio_xfm_test/copy-xfm.c -make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' -[ 72%] Built target minc_types -make -f testdir/CMakeFiles/verify_xfm.dir/build.make testdir/CMakeFiles/verify_xfm.dir/depend -[ 73%] Linking C executable volume_test -make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' -cd /build/libminc-2.4.05/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.05 /build/libminc-2.4.05/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/CMakeFiles/verify_xfm.dir/DependInfo.cmake --color= -cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/volume_test.dir/link.txt --verbose=1 -[ 74%] Linking C executable mincapi cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/mincapi.dir/link.txt --verbose=1 -[ 75%] Building C object testdir/CMakeFiles/create_grid_xfm.dir/create_grid_xfm.c.o -/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/volume_test.dir/volume_test.c.o -o volume_test -Wl,-rpath,/build/libminc-2.4.05/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.3.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libz.so -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/lib/x86_64-linux-gnu/libdl.a -lm -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so -cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/create_grid_xfm.dir/create_grid_xfm.c.o -MF CMakeFiles/create_grid_xfm.dir/create_grid_xfm.c.o.d -o CMakeFiles/create_grid_xfm.dir/create_grid_xfm.c.o -c /build/libminc-2.4.05/testdir/create_grid_xfm.c -make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' -make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' -make -f testdir/CMakeFiles/verify_xfm.dir/build.make testdir/CMakeFiles/verify_xfm.dir/build +[ 73%] Built target icv_range +make -f testdir/CMakeFiles/copy_xfm.dir/build.make testdir/CMakeFiles/copy_xfm.dir/depend make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' +cd /build/libminc-2.4.05/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.05 /build/libminc-2.4.05/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/CMakeFiles/copy_xfm.dir/DependInfo.cmake --color= /usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/mincapi.dir/mincapi.c.o -o mincapi -Wl,-rpath,/build/libminc-2.4.05/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.3.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libz.so -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/lib/x86_64-linux-gnu/libdl.a -lm -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so -[ 75%] Built target icv_dim1 -make -f testdir/CMakeFiles/test_arg_parse.dir/build.make testdir/CMakeFiles/test_arg_parse.dir/depend -make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' -cd /build/libminc-2.4.05/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.05 /build/libminc-2.4.05/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/CMakeFiles/test_arg_parse.dir/DependInfo.cmake --color= -[ 75%] Building C object testdir/CMakeFiles/verify_xfm.dir/vio_xfm_test/verify_xfm.c.o -cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/verify_xfm.dir/vio_xfm_test/verify_xfm.c.o -MF CMakeFiles/verify_xfm.dir/vio_xfm_test/verify_xfm.c.o.d -o CMakeFiles/verify_xfm.dir/vio_xfm_test/verify_xfm.c.o -c /build/libminc-2.4.05/testdir/vio_xfm_test/verify_xfm.c -make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' -make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' -make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' -make -f testdir/CMakeFiles/test_arg_parse.dir/build.make testdir/CMakeFiles/test_arg_parse.dir/build -make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' -[ 75%] Built target minc_long_attr -make -f testdir/CMakeFiles/minc2-convert-test.dir/build.make testdir/CMakeFiles/minc2-convert-test.dir/depend -make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' -cd /build/libminc-2.4.05/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.05 /build/libminc-2.4.05/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/CMakeFiles/minc2-convert-test.dir/DependInfo.cmake --color= -make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' -[ 75%] Building C object testdir/CMakeFiles/test_arg_parse.dir/test_arg_parse.c.o -cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/test_arg_parse.dir/test_arg_parse.c.o -MF CMakeFiles/test_arg_parse.dir/test_arg_parse.c.o.d -o CMakeFiles/test_arg_parse.dir/test_arg_parse.c.o -c /build/libminc-2.4.05/testdir/test_arg_parse.c -make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' -make -f testdir/CMakeFiles/minc2-convert-test.dir/build.make testdir/CMakeFiles/minc2-convert-test.dir/build -[ 75%] Built target icv_range -make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' -make -f testdir/CMakeFiles/minc2-create-test-images-2.dir/build.make testdir/CMakeFiles/minc2-create-test-images-2.dir/depend -make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' -cd /build/libminc-2.4.05/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.05 /build/libminc-2.4.05/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/CMakeFiles/minc2-create-test-images-2.dir/DependInfo.cmake --color= -[ 75%] Built target icv -make -f testdir/CMakeFiles/minc2-create-test-images.dir/build.make testdir/CMakeFiles/minc2-create-test-images.dir/depend -make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' -cd /build/libminc-2.4.05/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.05 /build/libminc-2.4.05/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/CMakeFiles/minc2-create-test-images.dir/DependInfo.cmake --color= -[ 75%] Building C object testdir/CMakeFiles/minc2-convert-test.dir/minc2-convert-test.c.o -make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' -cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/minc2-convert-test.dir/minc2-convert-test.c.o -MF CMakeFiles/minc2-convert-test.dir/minc2-convert-test.c.o.d -o CMakeFiles/minc2-convert-test.dir/minc2-convert-test.c.o -c /build/libminc-2.4.05/testdir/minc2-convert-test.c -[ 75%] Built target icv_vec -make -f testdir/CMakeFiles/minc2-datatype-test.dir/build.make testdir/CMakeFiles/minc2-datatype-test.dir/depend make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' +make -f testdir/CMakeFiles/copy_xfm.dir/build.make testdir/CMakeFiles/copy_xfm.dir/build make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' -cd /build/libminc-2.4.05/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.05 /build/libminc-2.4.05/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/CMakeFiles/minc2-datatype-test.dir/DependInfo.cmake --color= -make -f testdir/CMakeFiles/minc2-create-test-images-2.dir/build.make testdir/CMakeFiles/minc2-create-test-images-2.dir/build +[ 74%] Linking C executable volume_test +cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/volume_test.dir/link.txt --verbose=1 +[ 74%] Building C object testdir/CMakeFiles/copy_xfm.dir/vio_xfm_test/copy-xfm.c.o +cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/copy_xfm.dir/vio_xfm_test/copy-xfm.c.o -MF CMakeFiles/copy_xfm.dir/vio_xfm_test/copy-xfm.c.o.d -o CMakeFiles/copy_xfm.dir/vio_xfm_test/copy-xfm.c.o -c /build/libminc-2.4.05/testdir/vio_xfm_test/copy-xfm.c +/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/volume_test.dir/volume_test.c.o -o volume_test -Wl,-rpath,/build/libminc-2.4.05/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.3.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libz.so -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/lib/x86_64-linux-gnu/libdl.a -lm -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' -make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' +In file included from /build/libminc-2.4.05/ezminc/minc_1_simple.h:18, + from /build/libminc-2.4.05/ezminc/minc_1_simple_rw.h:18, + from /build/libminc-2.4.05/ezminc/minc_1_simple_rw.cpp:18: +/build/libminc-2.4.05/ezminc/minc_1_rw.h: In member function 'bool minc::minc_1_base::next_slice()': +/build/libminc-2.4.05/ezminc/minc_1_rw.h:147:41: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + 147 | for(int i=_ndims-_slice_dimensions-1;i>=0;i--) + | ~~~~~~~~~~~~~~~~~~~~~~~~^~ +/build/libminc-2.4.05/ezminc/minc_1_rw.h: In member function 'int minc::minc_1_base::slice_dimensions() const': +/build/libminc-2.4.05/ezminc/minc_1_rw.h:189:14: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + 189 | return _slice_dimensions; + | ^~~~~~~~~~~~~~~~~ +/build/libminc-2.4.05/ezminc/minc_1_rw.h: In member function 'int minc::minc_1_base::ndim(int) const': +/build/libminc-2.4.05/ezminc/minc_1_rw.h:203:32: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + 203 | if(j>=0) return _info[j].length; In file included from /build/libminc-2.4.05/ezminc/minc_1_rw.cpp:23: /build/libminc-2.4.05/ezminc/minc_1_rw.h: In member function 'bool minc::minc_1_base::next_slice()': /build/libminc-2.4.05/ezminc/minc_1_rw.h:147:41: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 147 | for(int i=_ndims-_slice_dimensions-1;i>=0;i--) | ~~~~~~~~~~~~~~~~~~~~~~~~^~ -make -f testdir/CMakeFiles/minc2-create-test-images.dir/build.make testdir/CMakeFiles/minc2-create-test-images.dir/build /build/libminc-2.4.05/ezminc/minc_1_rw.h: In member function 'int minc::minc_1_base::slice_dimensions() const': /build/libminc-2.4.05/ezminc/minc_1_rw.h:189:14: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 189 | return _slice_dimensions; @@ -3947,31 +3943,20 @@ /build/libminc-2.4.05/ezminc/minc_1_rw.h: In member function 'int minc::minc_1_base::ndim(int) const': /build/libminc-2.4.05/ezminc/minc_1_rw.h:203:32: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 203 | if(j>=0) return _info[j].length; -[ 75%] Linking C executable test_xfm -make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' -cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_xfm.dir/link.txt --verbose=1 make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' -make -f testdir/CMakeFiles/minc2-datatype-test.dir/build.make testdir/CMakeFiles/minc2-datatype-test.dir/build +[ 74%] Built target minc_long_attr make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' +make -f testdir/CMakeFiles/create_grid_xfm.dir/build.make testdir/CMakeFiles/create_grid_xfm.dir/depend +[ 74%] Built target test_mconv make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' -[ 75%] Linking C executable copy_xfm -/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now "CMakeFiles/test_xfm.dir/vio_xfm_test/test-xfm.c.o" -o test_xfm -Wl,-rpath,/usr/lib/x86_64-linux-gnu/hdf5/serial:/build/libminc-2.4.05/obj-x86_64-linux-gnu /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libz.so -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so ../libminc2.so.5.3.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libz.so -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/lib/x86_64-linux-gnu/libdl.a -lm -lrt -lm -ldl /usr/lib/x86_64-linux-gnu/libnetcdf.so -lm -ldl /usr/lib/x86_64-linux-gnu/libnetcdf.so -cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/copy_xfm.dir/link.txt --verbose=1 -[ 75%] Building C object testdir/CMakeFiles/minc2-create-test-images.dir/minc2-create-test-images.c.o -cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/minc2-create-test-images.dir/minc2-create-test-images.c.o -MF CMakeFiles/minc2-create-test-images.dir/minc2-create-test-images.c.o.d -o CMakeFiles/minc2-create-test-images.dir/minc2-create-test-images.c.o -c /build/libminc-2.4.05/testdir/minc2-create-test-images.c -[ 75%] Built target minc_conversion -make -f testdir/CMakeFiles/minc2-large-attribute.dir/build.make testdir/CMakeFiles/minc2-large-attribute.dir/depend -make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' -cd /build/libminc-2.4.05/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.05 /build/libminc-2.4.05/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/CMakeFiles/minc2-large-attribute.dir/DependInfo.cmake --color= -[ 76%] Building C object testdir/CMakeFiles/minc2-datatype-test.dir/minc2-datatype-test.c.o -[ 76%] Building C object testdir/CMakeFiles/minc2-create-test-images-2.dir/minc2-create-test-images-2.c.o -cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/minc2-create-test-images-2.dir/minc2-create-test-images-2.c.o -MF CMakeFiles/minc2-create-test-images-2.dir/minc2-create-test-images-2.c.o.d -o CMakeFiles/minc2-create-test-images-2.dir/minc2-create-test-images-2.c.o -c /build/libminc-2.4.05/testdir/minc2-create-test-images-2.c -cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/minc2-datatype-test.dir/minc2-datatype-test.c.o -MF CMakeFiles/minc2-datatype-test.dir/minc2-datatype-test.c.o.d -o CMakeFiles/minc2-datatype-test.dir/minc2-datatype-test.c.o -c /build/libminc-2.4.05/testdir/minc2-datatype-test.c +cd /build/libminc-2.4.05/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.05 /build/libminc-2.4.05/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/CMakeFiles/create_grid_xfm.dir/DependInfo.cmake --color= +make -f testdir/CMakeFiles/verify_xfm.dir/build.make testdir/CMakeFiles/verify_xfm.dir/depend /build/libminc-2.4.05/ezminc/minc_1_rw.cpp: In member function 'void minc::minc_1_reader::open(const char*, bool, bool, bool)': /build/libminc-2.4.05/ezminc/minc_1_rw.cpp:593:51: warning: conversion from 'long int' to 'double' may change value [-Wconversion] 593 | _info[i].start+=_info[i].step*(dimlength-1); | ~~~~~~~~~~^~~ -/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now "CMakeFiles/copy_xfm.dir/vio_xfm_test/copy-xfm.c.o" -o copy_xfm -Wl,-rpath,/usr/lib/x86_64-linux-gnu/hdf5/serial:/build/libminc-2.4.05/obj-x86_64-linux-gnu /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libz.so -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so ../libminc2.so.5.3.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libz.so -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/lib/x86_64-linux-gnu/libdl.a -lm -lrt -lm -ldl /usr/lib/x86_64-linux-gnu/libnetcdf.so -lm -ldl /usr/lib/x86_64-linux-gnu/libnetcdf.so +make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' +cd /build/libminc-2.4.05/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.05 /build/libminc-2.4.05/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/CMakeFiles/verify_xfm.dir/DependInfo.cmake --color= /build/libminc-2.4.05/ezminc/minc_1_rw.cpp:656:36: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 656 | _slab_len*=_info[_ndims-i-1].length; | ^~~~~~ @@ -3979,23 +3964,9 @@ /build/libminc-2.4.05/ezminc/minc_1_rw.cpp:710:22: warning: conversion from 'std::vector::size_type' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 710 | _ndims=_info.size(); | ~~~~~~~~~~^~ -[ 76%] Linking C executable create_grid_xfm /build/libminc-2.4.05/ezminc/minc_1_rw.cpp:744:36: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 744 | _slab_len*=_info[_ndims-i-1].length; | ^~~~~~ -cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/create_grid_xfm.dir/link.txt --verbose=1 -In file included from /build/libminc-2.4.05/ezminc/minc_1_simple.h:18, - from /build/libminc-2.4.05/ezminc/minc_1_simple_rw.h:18, - from /build/libminc-2.4.05/ezminc/minc_1_simple_rw.cpp:18: -/build/libminc-2.4.05/ezminc/minc_1_rw.h: In member function 'bool minc::minc_1_base::next_slice()': -/build/libminc-2.4.05/ezminc/minc_1_rw.h:147:41: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - 147 | for(int i=_ndims-_slice_dimensions-1;i>=0;i--) - | ~~~~~~~~~~~~~~~~~~~~~~~~^~ -make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' -/build/libminc-2.4.05/ezminc/minc_1_rw.h: In member function 'int minc::minc_1_base::slice_dimensions() const': -/build/libminc-2.4.05/ezminc/minc_1_rw.h:189:14: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - 189 | return _slice_dimensions; - | ^~~~~~~~~~~~~~~~~ In file included from /build/libminc-2.4.05/ezminc/minc_1_rw.h:21: /build/libminc-2.4.05/ezminc/minc_1_rw.cpp: In member function 'void minc::minc_1_writer::setup_write_float()': /build/libminc-2.4.05/ezminc/minc_1_rw.cpp:840:94: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] @@ -4004,9 +3975,6 @@ /build/libminc-2.4.05/ezminc/minc_io_exceptions.h:19:36: note: in definition of macro 'CHECK_MINC_CALL' 19 | #define CHECK_MINC_CALL(var) { if((var)<0) REPORT_ERROR("MINC CALL FAILED");} | ^~~ -/build/libminc-2.4.05/ezminc/minc_1_rw.h: In member function 'int minc::minc_1_base::ndim(int) const': -/build/libminc-2.4.05/ezminc/minc_1_rw.h:203:32: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - 203 | if(j>=0) return _info[j].length; /build/libminc-2.4.05/ezminc/minc_1_rw.cpp:841:94: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 841 | CHECK_MINC_CALL(_icmin=micreate_std_variable(_mincid, MIimagemin, NC_DOUBLE, _ndims-_slice_dimensions, mdims)); | ~~~~~~^~~~~~~~~~~~~~~~~~ @@ -4037,7 +4005,6 @@ /build/libminc-2.4.05/ezminc/minc_io_exceptions.h:19:36: note: in definition of macro 'CHECK_MINC_CALL' 19 | #define CHECK_MINC_CALL(var) { if((var)<0) REPORT_ERROR("MINC CALL FAILED");} | ^~~ -make -f testdir/CMakeFiles/minc2-large-attribute.dir/build.make testdir/CMakeFiles/minc2-large-attribute.dir/build /build/libminc-2.4.05/ezminc/minc_1_rw.cpp: In member function 'void minc::minc_1_writer::setup_write_double()': /build/libminc-2.4.05/ezminc/minc_1_rw.cpp:916:94: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 916 | CHECK_MINC_CALL(_icmax=micreate_std_variable(_mincid, MIimagemax, NC_DOUBLE, _ndims-_slice_dimensions, mdims)); @@ -4075,26 +4042,12 @@ /build/libminc-2.4.05/ezminc/minc_io_exceptions.h:19:36: note: in definition of macro 'CHECK_MINC_CALL' 19 | #define CHECK_MINC_CALL(var) { if((var)<0) REPORT_ERROR("MINC CALL FAILED");} | ^~~ -/build/libminc-2.4.05/testdir/minc2-convert-test.c: In function 'main': -/build/libminc-2.4.05/testdir/minc2-convert-test.c:97:29: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 97 | coords[0] = i; - | ^ -/build/libminc-2.4.05/testdir/minc2-convert-test.c:98:29: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 98 | coords[1] = j; - | ^ -/build/libminc-2.4.05/testdir/minc2-convert-test.c:99:29: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 99 | coords[2] = k; - | ^ -/build/libminc-2.4.05/testdir/minc2-convert-test.c:101:28: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'double' may change value [-Wconversion] - 101 | voxel[0] = coords[0]; - | ^~~~~~ -/build/libminc-2.4.05/testdir/minc2-convert-test.c:102:28: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'double' may change value [-Wconversion] - 102 | voxel[1] = coords[1]; - | ^~~~~~ -/build/libminc-2.4.05/testdir/minc2-convert-test.c:103:28: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'double' may change value [-Wconversion] - 103 | voxel[2] = coords[2]; - | ^~~~~~ +[ 74%] Built target icv +make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' +make -f testdir/CMakeFiles/create_grid_xfm.dir/build.make testdir/CMakeFiles/create_grid_xfm.dir/build make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' +make -f testdir/CMakeFiles/test_arg_parse.dir/build.make testdir/CMakeFiles/test_arg_parse.dir/depend +make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' /build/libminc-2.4.05/ezminc/minc_1_rw.cpp: In member function 'void minc::minc_1_writer::append_history(const char*)': /build/libminc-2.4.05/ezminc/minc_1_rw.cpp:1457:16: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 1457 | att_length += strlen(append_history) + 1; @@ -4119,22 +4072,104 @@ /build/libminc-2.4.05/ezminc/minc_1_rw.cpp:1506:72: warning: conversion from 'std::vector::size_type' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 1506 | ncattput(_mincid, create_var_id(varname),attname, NC_BYTE, val.size(), &val[0]); | ~~~~~~~~^~ -[ 76%] Linking C executable test_arg_parse -/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/create_grid_xfm.dir/create_grid_xfm.c.o -o create_grid_xfm -Wl,-rpath,/usr/lib/x86_64-linux-gnu/hdf5/serial:/build/libminc-2.4.05/obj-x86_64-linux-gnu /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libz.so -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so ../libminc2.so.5.3.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libz.so -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/lib/x86_64-linux-gnu/libdl.a -lm -lrt -lm -ldl /usr/lib/x86_64-linux-gnu/libnetcdf.so -lm -ldl /usr/lib/x86_64-linux-gnu/libnetcdf.so +make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' +cd /build/libminc-2.4.05/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.05 /build/libminc-2.4.05/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/CMakeFiles/test_arg_parse.dir/DependInfo.cmake --color= +[ 74%] Linking C executable test_xfm +make -f testdir/CMakeFiles/verify_xfm.dir/build.make testdir/CMakeFiles/verify_xfm.dir/build +make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' +cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_xfm.dir/link.txt --verbose=1 +make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' +[ 75%] Building C object testdir/CMakeFiles/create_grid_xfm.dir/create_grid_xfm.c.o +cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/create_grid_xfm.dir/create_grid_xfm.c.o -MF CMakeFiles/create_grid_xfm.dir/create_grid_xfm.c.o.d -o CMakeFiles/create_grid_xfm.dir/create_grid_xfm.c.o -c /build/libminc-2.4.05/testdir/create_grid_xfm.c +make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' +make -f testdir/CMakeFiles/test_arg_parse.dir/build.make testdir/CMakeFiles/test_arg_parse.dir/build +make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' +make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' +[ 75%] Building C object testdir/CMakeFiles/verify_xfm.dir/vio_xfm_test/verify_xfm.c.o +/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now "CMakeFiles/test_xfm.dir/vio_xfm_test/test-xfm.c.o" -o test_xfm -Wl,-rpath,/usr/lib/x86_64-linux-gnu/hdf5/serial:/build/libminc-2.4.05/obj-x86_64-linux-gnu /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libz.so -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so ../libminc2.so.5.3.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libz.so -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/lib/x86_64-linux-gnu/libdl.a -lm -lrt -lm -ldl /usr/lib/x86_64-linux-gnu/libnetcdf.so -lm -ldl /usr/lib/x86_64-linux-gnu/libnetcdf.so +cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/verify_xfm.dir/vio_xfm_test/verify_xfm.c.o -MF CMakeFiles/verify_xfm.dir/vio_xfm_test/verify_xfm.c.o.d -o CMakeFiles/verify_xfm.dir/vio_xfm_test/verify_xfm.c.o -c /build/libminc-2.4.05/testdir/vio_xfm_test/verify_xfm.c +[ 75%] Built target icv_dim1 +make -f testdir/CMakeFiles/minc2-convert-test.dir/build.make testdir/CMakeFiles/minc2-convert-test.dir/depend +make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' +cd /build/libminc-2.4.05/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.05 /build/libminc-2.4.05/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/CMakeFiles/minc2-convert-test.dir/DependInfo.cmake --color= +[ 75%] Building C object testdir/CMakeFiles/test_arg_parse.dir/test_arg_parse.c.o +cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/test_arg_parse.dir/test_arg_parse.c.o -MF CMakeFiles/test_arg_parse.dir/test_arg_parse.c.o.d -o CMakeFiles/test_arg_parse.dir/test_arg_parse.c.o -c /build/libminc-2.4.05/testdir/test_arg_parse.c +[ 75%] Built target minc_types +make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' +make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' +make -f testdir/CMakeFiles/minc2-convert-test.dir/build.make testdir/CMakeFiles/minc2-convert-test.dir/build +make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' +make -f testdir/CMakeFiles/minc2-create-test-images-2.dir/build.make testdir/CMakeFiles/minc2-create-test-images-2.dir/depend +make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' +make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' +cd /build/libminc-2.4.05/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.05 /build/libminc-2.4.05/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/CMakeFiles/minc2-create-test-images-2.dir/DependInfo.cmake --color= +[ 75%] Linking C executable copy_xfm +cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/copy_xfm.dir/link.txt --verbose=1 +[ 75%] Built target icv_dim +make -f testdir/CMakeFiles/minc2-create-test-images.dir/build.make testdir/CMakeFiles/minc2-create-test-images.dir/depend +[ 75%] Building C object testdir/CMakeFiles/minc2-convert-test.dir/minc2-convert-test.c.o +cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/minc2-convert-test.dir/minc2-convert-test.c.o -MF CMakeFiles/minc2-convert-test.dir/minc2-convert-test.c.o.d -o CMakeFiles/minc2-convert-test.dir/minc2-convert-test.c.o -c /build/libminc-2.4.05/testdir/minc2-convert-test.c +make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' +cd /build/libminc-2.4.05/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.05 /build/libminc-2.4.05/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/CMakeFiles/minc2-create-test-images.dir/DependInfo.cmake --color= +[ 75%] Built target icv_fillvalue +make -f testdir/CMakeFiles/minc2-datatype-test.dir/build.make testdir/CMakeFiles/minc2-datatype-test.dir/depend +/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now "CMakeFiles/copy_xfm.dir/vio_xfm_test/copy-xfm.c.o" -o copy_xfm -Wl,-rpath,/usr/lib/x86_64-linux-gnu/hdf5/serial:/build/libminc-2.4.05/obj-x86_64-linux-gnu /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libz.so -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so ../libminc2.so.5.3.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libz.so -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/lib/x86_64-linux-gnu/libdl.a -lm -lrt -lm -ldl /usr/lib/x86_64-linux-gnu/libnetcdf.so -lm -ldl /usr/lib/x86_64-linux-gnu/libnetcdf.so +make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' +make -f testdir/CMakeFiles/minc2-create-test-images-2.dir/build.make testdir/CMakeFiles/minc2-create-test-images-2.dir/build +make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' +make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' +cd /build/libminc-2.4.05/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.05 /build/libminc-2.4.05/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/CMakeFiles/minc2-datatype-test.dir/DependInfo.cmake --color= +make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' +make -f testdir/CMakeFiles/minc2-create-test-images.dir/build.make testdir/CMakeFiles/minc2-create-test-images.dir/build +make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' +[ 75%] Linking C executable create_grid_xfm +cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/create_grid_xfm.dir/link.txt --verbose=1 +make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' +[ 75%] Linking C executable test_arg_parse cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_arg_parse.dir/link.txt --verbose=1 -[ 76%] Building C object testdir/CMakeFiles/minc2-large-attribute.dir/minc2-large-attribute.c.o -/build/libminc-2.4.05/testdir/minc2-create-test-images.c: In function 'create_3D_image': -/build/libminc-2.4.05/testdir/minc2-create-test-images.c:137:16: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 137 | start[0] = i; - | ^ -/build/libminc-2.4.05/testdir/minc2-create-test-images.c: In function 'create_4D_image': -/build/libminc-2.4.05/testdir/minc2-create-test-images.c:210:16: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 210 | start[0] = i; - | ^ -/build/libminc-2.4.05/testdir/minc2-create-test-images.c:212:18: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 212 | start[1] = j; - | ^ -cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/minc2-large-attribute.dir/minc2-large-attribute.c.o -MF CMakeFiles/minc2-large-attribute.dir/minc2-large-attribute.c.o.d -o CMakeFiles/minc2-large-attribute.dir/minc2-large-attribute.c.o -c /build/libminc-2.4.05/testdir/minc2-large-attribute.c +[ 75%] Building C object testdir/CMakeFiles/minc2-create-test-images-2.dir/minc2-create-test-images-2.c.o +cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/minc2-create-test-images-2.dir/minc2-create-test-images-2.c.o -MF CMakeFiles/minc2-create-test-images-2.dir/minc2-create-test-images-2.c.o.d -o CMakeFiles/minc2-create-test-images-2.dir/minc2-create-test-images-2.c.o -c /build/libminc-2.4.05/testdir/minc2-create-test-images-2.c +[ 75%] Building C object testdir/CMakeFiles/minc2-create-test-images.dir/minc2-create-test-images.c.o +cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/minc2-create-test-images.dir/minc2-create-test-images.c.o -MF CMakeFiles/minc2-create-test-images.dir/minc2-create-test-images.c.o.d -o CMakeFiles/minc2-create-test-images.dir/minc2-create-test-images.c.o -c /build/libminc-2.4.05/testdir/minc2-create-test-images.c +/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/create_grid_xfm.dir/create_grid_xfm.c.o -o create_grid_xfm -Wl,-rpath,/usr/lib/x86_64-linux-gnu/hdf5/serial:/build/libminc-2.4.05/obj-x86_64-linux-gnu /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libz.so -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so ../libminc2.so.5.3.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libz.so -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/lib/x86_64-linux-gnu/libdl.a -lm -lrt -lm -ldl /usr/lib/x86_64-linux-gnu/libnetcdf.so -lm -ldl /usr/lib/x86_64-linux-gnu/libnetcdf.so +make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' +make -f testdir/CMakeFiles/minc2-datatype-test.dir/build.make testdir/CMakeFiles/minc2-datatype-test.dir/build +make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' +[ 76%] Linking C executable multidim_test +cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/multidim_test.dir/link.txt --verbose=1 +[ 76%] Built target icv_vec +make -f testdir/CMakeFiles/minc2-large-attribute.dir/build.make testdir/CMakeFiles/minc2-large-attribute.dir/depend +/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/test_arg_parse.dir/test_arg_parse.c.o -o test_arg_parse -Wl,-rpath,/build/libminc-2.4.05/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.3.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libz.so -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/lib/x86_64-linux-gnu/libdl.a -lm -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so +make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' +cd /build/libminc-2.4.05/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.05 /build/libminc-2.4.05/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/CMakeFiles/minc2-large-attribute.dir/DependInfo.cmake --color= +make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' +/build/libminc-2.4.05/testdir/minc2-convert-test.c: In function 'main': +/build/libminc-2.4.05/testdir/minc2-convert-test.c:97:29: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 97 | coords[0] = i; + | ^ +/build/libminc-2.4.05/testdir/minc2-convert-test.c:98:29: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 98 | coords[1] = j; + | ^ +/build/libminc-2.4.05/testdir/minc2-convert-test.c:99:29: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 99 | coords[2] = k; + | ^ +/build/libminc-2.4.05/testdir/minc2-convert-test.c:101:28: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'double' may change value [-Wconversion] + 101 | voxel[0] = coords[0]; + | ^~~~~~ +/build/libminc-2.4.05/testdir/minc2-convert-test.c:102:28: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'double' may change value [-Wconversion] + 102 | voxel[1] = coords[1]; + | ^~~~~~ +/build/libminc-2.4.05/testdir/minc2-convert-test.c:103:28: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'double' may change value [-Wconversion] + 103 | voxel[2] = coords[2]; + | ^~~~~~ +make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' +/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/multidim_test.dir/multidim_test.c.o -o multidim_test -Wl,-rpath,/build/libminc-2.4.05/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.3.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libz.so -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/lib/x86_64-linux-gnu/libdl.a -lm -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so +make -f testdir/CMakeFiles/minc2-full-test.dir/build.make testdir/CMakeFiles/minc2-full-test.dir/depend +[ 77%] Building C object testdir/CMakeFiles/minc2-datatype-test.dir/minc2-datatype-test.c.o +cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/minc2-datatype-test.dir/minc2-datatype-test.c.o -MF CMakeFiles/minc2-datatype-test.dir/minc2-datatype-test.c.o.d -o CMakeFiles/minc2-datatype-test.dir/minc2-datatype-test.c.o -c /build/libminc-2.4.05/testdir/minc2-datatype-test.c +make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' +cd /build/libminc-2.4.05/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.05 /build/libminc-2.4.05/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/CMakeFiles/minc2-full-test.dir/DependInfo.cmake --color= +make -f testdir/CMakeFiles/minc2-large-attribute.dir/build.make testdir/CMakeFiles/minc2-large-attribute.dir/build /build/libminc-2.4.05/testdir/minc2-create-test-images-2.c: In function 'create_real_as_int_image': /build/libminc-2.4.05/testdir/minc2-create-test-images-2.c:78:16: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 78 | start[0] = i; @@ -4146,17 +4181,40 @@ /build/libminc-2.4.05/testdir/minc2-create-test-images-2.c:154:16: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 154 | start[0] = i; | ^ -/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/test_arg_parse.dir/test_arg_parse.c.o -o test_arg_parse -Wl,-rpath,/build/libminc-2.4.05/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.3.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libz.so -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/lib/x86_64-linux-gnu/libdl.a -lm -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so -[ 76%] Linking C executable minc2-datatype-test -cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-datatype-test.dir/link.txt --verbose=1 -[ 77%] Linking C executable verify_xfm +make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' +[ 77%] Built target volume_test +/build/libminc-2.4.05/testdir/minc2-create-test-images.c: In function 'create_3D_image': +/build/libminc-2.4.05/testdir/minc2-create-test-images.c:137:16: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 137 | start[0] = i; + | ^ +/build/libminc-2.4.05/testdir/minc2-create-test-images.c: In function 'create_4D_image': +/build/libminc-2.4.05/testdir/minc2-create-test-images.c:210:16: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 210 | start[0] = i; + | ^ +/build/libminc-2.4.05/testdir/minc2-create-test-images.c:212:18: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 212 | start[1] = j; + | ^ +make -f testdir/CMakeFiles/minc2-grpattr-test.dir/build.make testdir/CMakeFiles/minc2-grpattr-test.dir/depend make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' +make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' +cd /build/libminc-2.4.05/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.05 /build/libminc-2.4.05/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/CMakeFiles/minc2-grpattr-test.dir/DependInfo.cmake --color= +[ 77%] Building C object testdir/CMakeFiles/minc2-large-attribute.dir/minc2-large-attribute.c.o +make -f testdir/CMakeFiles/minc2-full-test.dir/build.make testdir/CMakeFiles/minc2-full-test.dir/build +cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/minc2-large-attribute.dir/minc2-large-attribute.c.o -MF CMakeFiles/minc2-large-attribute.dir/minc2-large-attribute.c.o.d -o CMakeFiles/minc2-large-attribute.dir/minc2-large-attribute.c.o -c /build/libminc-2.4.05/testdir/minc2-large-attribute.c +make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' +[ 78%] Linking C executable verify_xfm cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/verify_xfm.dir/link.txt --verbose=1 -/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now "CMakeFiles/minc2-datatype-test.dir/minc2-datatype-test.c.o" -o minc2-datatype-test -Wl,-rpath,/build/libminc-2.4.05/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.3.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libz.so -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/lib/x86_64-linux-gnu/libdl.a -lm -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' +[ 79%] Building C object testdir/CMakeFiles/minc2-full-test.dir/minc2-full-test.c.o +cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/minc2-full-test.dir/minc2-full-test.c.o -MF CMakeFiles/minc2-full-test.dir/minc2-full-test.c.o.d -o CMakeFiles/minc2-full-test.dir/minc2-full-test.c.o -c /build/libminc-2.4.05/testdir/minc2-full-test.c +make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' +make -f testdir/CMakeFiles/minc2-grpattr-test.dir/build.make testdir/CMakeFiles/minc2-grpattr-test.dir/build /usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/verify_xfm.dir/vio_xfm_test/verify_xfm.c.o -o verify_xfm -Wl,-rpath,/usr/lib/x86_64-linux-gnu/hdf5/serial:/build/libminc-2.4.05/obj-x86_64-linux-gnu /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libz.so -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so ../libminc2.so.5.3.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libz.so -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/lib/x86_64-linux-gnu/libdl.a -lm -lrt -lm -ldl /usr/lib/x86_64-linux-gnu/libnetcdf.so -lm -ldl /usr/lib/x86_64-linux-gnu/libnetcdf.so -[ 77%] Built target mincapi -make -f testdir/CMakeFiles/minc2-full-test.dir/build.make testdir/CMakeFiles/minc2-full-test.dir/depend +make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' +[ 79%] Built target minc_conversion +make -f testdir/CMakeFiles/minc2-hyper-test-2.dir/build.make testdir/CMakeFiles/minc2-hyper-test-2.dir/depend +make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' +cd /build/libminc-2.4.05/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.05 /build/libminc-2.4.05/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/CMakeFiles/minc2-hyper-test-2.dir/DependInfo.cmake --color= /build/libminc-2.4.05/testdir/minc2-large-attribute.c: In function 'create_3D_image': /build/libminc-2.4.05/testdir/minc2-large-attribute.c:84:16: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 84 | start[0] = i; @@ -4170,39 +4228,32 @@ /build/libminc-2.4.05/testdir/minc2-large-attribute.c:94:55: warning: conversion to 'size_t' {aka 'long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 94 | miset_attr_values(hvol,MI_TYPE_STRING,"test","test",attribute_size,attribute); | ^~~~~~~~~~~~~~ -make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' -cd /build/libminc-2.4.05/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.05 /build/libminc-2.4.05/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/CMakeFiles/minc2-full-test.dir/DependInfo.cmake --color= -[ 78%] Linking C executable minc2-convert-test -cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-convert-test.dir/link.txt --verbose=1 -/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now "CMakeFiles/minc2-convert-test.dir/minc2-convert-test.c.o" -o minc2-convert-test -Wl,-rpath,/build/libminc-2.4.05/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.3.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libz.so -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/lib/x86_64-linux-gnu/libdl.a -lm -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so -[ 78%] Built target volume_test -make -f testdir/CMakeFiles/minc2-grpattr-test.dir/build.make testdir/CMakeFiles/minc2-grpattr-test.dir/depend -make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' -cd /build/libminc-2.4.05/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.05 /build/libminc-2.4.05/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/CMakeFiles/minc2-grpattr-test.dir/DependInfo.cmake --color= +[ 79%] Building C object testdir/CMakeFiles/minc2-grpattr-test.dir/minc2-grpattr-test.c.o +cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/minc2-grpattr-test.dir/minc2-grpattr-test.c.o -MF CMakeFiles/minc2-grpattr-test.dir/minc2-grpattr-test.c.o.d -o CMakeFiles/minc2-grpattr-test.dir/minc2-grpattr-test.c.o -c /build/libminc-2.4.05/testdir/minc2-grpattr-test.c make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' -make -f testdir/CMakeFiles/minc2-full-test.dir/build.make testdir/CMakeFiles/minc2-full-test.dir/build +make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' +make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' +make -f testdir/CMakeFiles/minc2-hyper-test-2.dir/build.make testdir/CMakeFiles/minc2-hyper-test-2.dir/build make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' -[ 79%] Linking C executable minc2-create-test-images [ 79%] Linking C executable minc2-create-test-images-2 -cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-create-test-images.dir/link.txt --verbose=1 cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-create-test-images-2.dir/link.txt --verbose=1 -[ 80%] Building C object testdir/CMakeFiles/minc2-full-test.dir/minc2-full-test.c.o -cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/minc2-full-test.dir/minc2-full-test.c.o -MF CMakeFiles/minc2-full-test.dir/minc2-full-test.c.o.d -o CMakeFiles/minc2-full-test.dir/minc2-full-test.c.o -c /build/libminc-2.4.05/testdir/minc2-full-test.c -make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' -make -f testdir/CMakeFiles/minc2-grpattr-test.dir/build.make testdir/CMakeFiles/minc2-grpattr-test.dir/build -/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now "CMakeFiles/minc2-create-test-images-2.dir/minc2-create-test-images-2.c.o" -o minc2-create-test-images-2 -Wl,-rpath,/build/libminc-2.4.05/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.3.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libz.so -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/lib/x86_64-linux-gnu/libdl.a -lm -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so +[ 80%] Linking C executable minc2-convert-test +cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-convert-test.dir/link.txt --verbose=1 +[ 80%] Built target mincapi +make -f testdir/CMakeFiles/minc2-hyper-test.dir/build.make testdir/CMakeFiles/minc2-hyper-test.dir/depend +[ 80%] Built target test_xfm make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' -/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now "CMakeFiles/minc2-create-test-images.dir/minc2-create-test-images.c.o" -o minc2-create-test-images -Wl,-rpath,/build/libminc-2.4.05/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.3.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libz.so -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/lib/x86_64-linux-gnu/libdl.a -lm -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so -[ 80%] Building C object testdir/CMakeFiles/minc2-grpattr-test.dir/minc2-grpattr-test.c.o -cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/minc2-grpattr-test.dir/minc2-grpattr-test.c.o -MF CMakeFiles/minc2-grpattr-test.dir/minc2-grpattr-test.c.o.d -o CMakeFiles/minc2-grpattr-test.dir/minc2-grpattr-test.c.o -c /build/libminc-2.4.05/testdir/minc2-grpattr-test.c -[ 80%] Linking C executable minc2-large-attribute -make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' -cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-large-attribute.dir/link.txt --verbose=1 -make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' -make -f testdir/CMakeFiles/minc2-hyper-test-2.dir/build.make testdir/CMakeFiles/minc2-hyper-test-2.dir/depend +cd /build/libminc-2.4.05/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.05 /build/libminc-2.4.05/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/CMakeFiles/minc2-hyper-test.dir/DependInfo.cmake --color= +make -f testdir/CMakeFiles/minc2-label-test.dir/build.make testdir/CMakeFiles/minc2-label-test.dir/depend +[ 81%] Linking C executable minc2-create-test-images +cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-create-test-images.dir/link.txt --verbose=1 +[ 81%] Building C object testdir/CMakeFiles/minc2-hyper-test-2.dir/minc2-hyper-test-2.c.o +/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now "CMakeFiles/minc2-create-test-images-2.dir/minc2-create-test-images-2.c.o" -o minc2-create-test-images-2 -Wl,-rpath,/build/libminc-2.4.05/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.3.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libz.so -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/lib/x86_64-linux-gnu/libdl.a -lm -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so +/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now "CMakeFiles/minc2-convert-test.dir/minc2-convert-test.c.o" -o minc2-convert-test -Wl,-rpath,/build/libminc-2.4.05/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.3.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libz.so -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/lib/x86_64-linux-gnu/libdl.a -lm -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' -cd /build/libminc-2.4.05/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.05 /build/libminc-2.4.05/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/CMakeFiles/minc2-hyper-test-2.dir/DependInfo.cmake --color= -/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now "CMakeFiles/minc2-large-attribute.dir/minc2-large-attribute.c.o" -o minc2-large-attribute -Wl,-rpath,/build/libminc-2.4.05/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.3.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libz.so -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/lib/x86_64-linux-gnu/libdl.a -lm -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so +cd /build/libminc-2.4.05/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.05 /build/libminc-2.4.05/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/CMakeFiles/minc2-label-test.dir/DependInfo.cmake --color= +cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/minc2-hyper-test-2.dir/minc2-hyper-test-2.c.o -MF CMakeFiles/minc2-hyper-test-2.dir/minc2-hyper-test-2.c.o.d -o CMakeFiles/minc2-hyper-test-2.dir/minc2-hyper-test-2.c.o -c /build/libminc-2.4.05/testdir/minc2-hyper-test-2.c +[ 81%] Linking C executable minc2-datatype-test /build/libminc-2.4.05/testdir/minc2-full-test.c: In function 'test1': /build/libminc-2.4.05/testdir/minc2-full-test.c:111:29: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 111 | coords[0] = i; @@ -4217,6 +4268,7 @@ /build/libminc-2.4.05/testdir/minc2-full-test.c:227:29: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 227 | coords[0] = i; | ^ +cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-datatype-test.dir/link.txt --verbose=1 /build/libminc-2.4.05/testdir/minc2-full-test.c:228:29: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 228 | coords[1] = j; | ^ @@ -4238,58 +4290,78 @@ /build/libminc-2.4.05/testdir/minc2-full-test.c:251:29: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 251 | coords[2] = k; | ^ -[ 80%] Built target copy_xfm -make -f testdir/CMakeFiles/minc2-hyper-test.dir/build.make testdir/CMakeFiles/minc2-hyper-test.dir/depend -[ 80%] Built target test_xfm -make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' -cd /build/libminc-2.4.05/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.05 /build/libminc-2.4.05/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/CMakeFiles/minc2-hyper-test.dir/DependInfo.cmake --color= -make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' -make -f testdir/CMakeFiles/minc2-hyper-test-2.dir/build.make testdir/CMakeFiles/minc2-hyper-test-2.dir/build -make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' -make -f testdir/CMakeFiles/minc2-label-test.dir/build.make testdir/CMakeFiles/minc2-label-test.dir/depend -make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' -cd /build/libminc-2.4.05/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.05 /build/libminc-2.4.05/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/CMakeFiles/minc2-label-test.dir/DependInfo.cmake --color= -make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' -[ 81%] Linking C executable multidim_test -cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/multidim_test.dir/link.txt --verbose=1 make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' -make -f testdir/CMakeFiles/minc2-hyper-test.dir/build.make testdir/CMakeFiles/minc2-hyper-test.dir/build +[ 81%] Linking C executable minc2-large-attribute make -f testdir/CMakeFiles/minc2-label-test.dir/build.make testdir/CMakeFiles/minc2-label-test.dir/build +cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-large-attribute.dir/link.txt --verbose=1 +[ 81%] Built target copy_xfm +/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now "CMakeFiles/minc2-datatype-test.dir/minc2-datatype-test.c.o" -o minc2-datatype-test -Wl,-rpath,/build/libminc-2.4.05/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.3.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libz.so -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/lib/x86_64-linux-gnu/libdl.a -lm -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so +/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now "CMakeFiles/minc2-create-test-images.dir/minc2-create-test-images.c.o" -o minc2-create-test-images -Wl,-rpath,/build/libminc-2.4.05/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.3.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libz.so -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/lib/x86_64-linux-gnu/libdl.a -lm -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' -make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' -[ 81%] Built target test_arg_parse +make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' +make -f testdir/CMakeFiles/minc2-hyper-test.dir/build.make testdir/CMakeFiles/minc2-hyper-test.dir/build make -f testdir/CMakeFiles/minc2-multires-test.dir/build.make testdir/CMakeFiles/minc2-multires-test.dir/depend make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' +make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' cd /build/libminc-2.4.05/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.05 /build/libminc-2.4.05/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/CMakeFiles/minc2-multires-test.dir/DependInfo.cmake --color= -[ 81%] Building C object testdir/CMakeFiles/minc2-hyper-test-2.dir/minc2-hyper-test-2.c.o +[ 81%] Building C object testdir/CMakeFiles/minc2-label-test.dir/minc2-label-test.c.o +/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now "CMakeFiles/minc2-large-attribute.dir/minc2-large-attribute.c.o" -o minc2-large-attribute -Wl,-rpath,/build/libminc-2.4.05/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.3.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libz.so -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/lib/x86_64-linux-gnu/libdl.a -lm -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so +cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/minc2-label-test.dir/minc2-label-test.c.o -MF CMakeFiles/minc2-label-test.dir/minc2-label-test.c.o.d -o CMakeFiles/minc2-label-test.dir/minc2-label-test.c.o -c /build/libminc-2.4.05/testdir/minc2-label-test.c [ 81%] Building C object testdir/CMakeFiles/minc2-hyper-test.dir/minc2-hyper-test.c.o -cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/minc2-hyper-test-2.dir/minc2-hyper-test-2.c.o -MF CMakeFiles/minc2-hyper-test-2.dir/minc2-hyper-test-2.c.o.d -o CMakeFiles/minc2-hyper-test-2.dir/minc2-hyper-test-2.c.o -c /build/libminc-2.4.05/testdir/minc2-hyper-test-2.c -cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/minc2-hyper-test.dir/minc2-hyper-test.c.o -MF CMakeFiles/minc2-hyper-test.dir/minc2-hyper-test.c.o.d -o CMakeFiles/minc2-hyper-test.dir/minc2-hyper-test.c.o -c /build/libminc-2.4.05/testdir/minc2-hyper-test.c -/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/multidim_test.dir/multidim_test.c.o -o multidim_test -Wl,-rpath,/build/libminc-2.4.05/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.3.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libz.so -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/lib/x86_64-linux-gnu/libdl.a -lm -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so +/build/libminc-2.4.05/testdir/minc2-hyper-test-2.c: In function 'create_test_file': +/build/libminc-2.4.05/testdir/minc2-hyper-test-2.c:72:16: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 72 | start[0] = i; + | ^ make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' +cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/minc2-hyper-test.dir/minc2-hyper-test.c.o -MF CMakeFiles/minc2-hyper-test.dir/minc2-hyper-test.c.o.d -o CMakeFiles/minc2-hyper-test.dir/minc2-hyper-test.c.o -c /build/libminc-2.4.05/testdir/minc2-hyper-test.c make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' -[ 81%] Building C object testdir/CMakeFiles/minc2-label-test.dir/minc2-label-test.c.o make -f testdir/CMakeFiles/minc2-multires-test.dir/build.make testdir/CMakeFiles/minc2-multires-test.dir/build -cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/minc2-label-test.dir/minc2-label-test.c.o -MF CMakeFiles/minc2-label-test.dir/minc2-label-test.c.o.d -o CMakeFiles/minc2-label-test.dir/minc2-label-test.c.o -c /build/libminc-2.4.05/testdir/minc2-label-test.c make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' +make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' [ 81%] Built target create_grid_xfm make -f testdir/CMakeFiles/minc2-record-test.dir/build.make testdir/CMakeFiles/minc2-record-test.dir/depend make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' cd /build/libminc-2.4.05/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.05 /build/libminc-2.4.05/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/CMakeFiles/minc2-record-test.dir/DependInfo.cmake --color= +[ 81%] Built target test_arg_parse +make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' +/build/libminc-2.4.05/testdir/minc2-label-test.c: In function 'create_label_image': [ 82%] Building C object testdir/CMakeFiles/minc2-multires-test.dir/minc2-multires-test.c.o +/build/libminc-2.4.05/testdir/minc2-label-test.c:110:21: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 110 | coords[0] = i; + | ^ +/build/libminc-2.4.05/testdir/minc2-label-test.c:111:21: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 111 | coords[1] = j; + | ^ +/build/libminc-2.4.05/testdir/minc2-label-test.c:112:21: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 112 | coords[2] = k; + | ^ cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/minc2-multires-test.dir/minc2-multires-test.c.o -MF CMakeFiles/minc2-multires-test.dir/minc2-multires-test.c.o.d -o CMakeFiles/minc2-multires-test.dir/minc2-multires-test.c.o -c /build/libminc-2.4.05/testdir/minc2-multires-test.c -/build/libminc-2.4.05/testdir/minc2-hyper-test-2.c: In function 'create_test_file': -/build/libminc-2.4.05/testdir/minc2-hyper-test-2.c:72:16: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 72 | start[0] = i; - | ^ +make -f testdir/CMakeFiles/minc2-slice-test.dir/build.make testdir/CMakeFiles/minc2-slice-test.dir/depend +make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' +cd /build/libminc-2.4.05/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.05 /build/libminc-2.4.05/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/CMakeFiles/minc2-slice-test.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' make -f testdir/CMakeFiles/minc2-record-test.dir/build.make testdir/CMakeFiles/minc2-record-test.dir/build +[ 82%] Built target multidim_test +make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' +make -f testdir/CMakeFiles/minc2-valid-test.dir/build.make testdir/CMakeFiles/minc2-valid-test.dir/depend +make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' +cd /build/libminc-2.4.05/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.05 /build/libminc-2.4.05/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/CMakeFiles/minc2-valid-test.dir/DependInfo.cmake --color= +[ 82%] Building C object testdir/CMakeFiles/minc2-record-test.dir/minc2-record-test.c.o +make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' +cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/minc2-record-test.dir/minc2-record-test.c.o -MF CMakeFiles/minc2-record-test.dir/minc2-record-test.c.o.d -o CMakeFiles/minc2-record-test.dir/minc2-record-test.c.o -c /build/libminc-2.4.05/testdir/minc2-record-test.c +make -f testdir/CMakeFiles/minc2-slice-test.dir/build.make testdir/CMakeFiles/minc2-slice-test.dir/build +make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' +[ 82%] Linking C executable minc2-full-test +cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-full-test.dir/link.txt --verbose=1 +[ 83%] Linking C executable minc2-hyper-test-2 +cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-hyper-test-2.dir/link.txt --verbose=1 +make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' +make -f testdir/CMakeFiles/minc2-valid-test.dir/build.make testdir/CMakeFiles/minc2-valid-test.dir/build /build/libminc-2.4.05/testdir/minc2-hyper-test.c: In function 'create_and_test_image': /build/libminc-2.4.05/testdir/minc2-hyper-test.c:89:26: warning: conversion to 'short unsigned int' from 'short int' may change the sign of the result [-Wsign-conversion] 89 | stmp2[i][j][k] = (short)((i*XP)+(j*YP)+(k*ZP)); | ^ -make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' /build/libminc-2.4.05/testdir/minc2-hyper-test.c:261:20: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 261 | start[0] = i; | ^ @@ -4312,6 +4384,7 @@ /build/libminc-2.4.05/testdir/minc2-hyper-test.c:458:31: warning: conversion to 'short int' from 'short unsigned int' may change the sign of the result [-Wsign-conversion] 458 | short t = stmp2[i][j][k]; | ^~~~~ +make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' /build/libminc-2.4.05/testdir/minc2-hyper-test.c: In function 'test3': /build/libminc-2.4.05/testdir/minc2-hyper-test.c:814:28: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 814 | start[0] = i; @@ -4322,28 +4395,10 @@ /build/libminc-2.4.05/testdir/minc2-hyper-test.c:816:28: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 816 | start[2] = k; | ^ -[ 82%] Building C object testdir/CMakeFiles/minc2-record-test.dir/minc2-record-test.c.o -make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' -[ 82%] Linking C executable minc2-full-test -cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/minc2-record-test.dir/minc2-record-test.c.o -MF CMakeFiles/minc2-record-test.dir/minc2-record-test.c.o.d -o CMakeFiles/minc2-record-test.dir/minc2-record-test.c.o -c /build/libminc-2.4.05/testdir/minc2-record-test.c -cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-full-test.dir/link.txt --verbose=1 -make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' -[ 82%] Built target minc2-convert-test -make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' -/build/libminc-2.4.05/testdir/minc2-label-test.c: In function 'create_label_image': -/build/libminc-2.4.05/testdir/minc2-label-test.c:110:21: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 110 | coords[0] = i; - | ^ -/build/libminc-2.4.05/testdir/minc2-label-test.c:111:21: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 111 | coords[1] = j; - | ^ -/build/libminc-2.4.05/testdir/minc2-label-test.c:112:21: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 112 | coords[2] = k; - | ^ +[ 83%] Building C object testdir/CMakeFiles/minc2-slice-test.dir/minc2-slice-test.c.o +cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/minc2-slice-test.dir/minc2-slice-test.c.o -MF CMakeFiles/minc2-slice-test.dir/minc2-slice-test.c.o.d -o CMakeFiles/minc2-slice-test.dir/minc2-slice-test.c.o -c /build/libminc-2.4.05/testdir/minc2-slice-test.c /usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now "CMakeFiles/minc2-full-test.dir/minc2-full-test.c.o" -o minc2-full-test -Wl,-rpath,/build/libminc-2.4.05/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.3.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libz.so -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/lib/x86_64-linux-gnu/libdl.a -lm -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so -make -f testdir/CMakeFiles/minc2-slice-test.dir/build.make testdir/CMakeFiles/minc2-slice-test.dir/depend -make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' -cd /build/libminc-2.4.05/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.05 /build/libminc-2.4.05/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/CMakeFiles/minc2-slice-test.dir/DependInfo.cmake --color= +/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now "CMakeFiles/minc2-hyper-test-2.dir/minc2-hyper-test-2.c.o" -o minc2-hyper-test-2 -Wl,-rpath,/build/libminc-2.4.05/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.3.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libz.so -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/lib/x86_64-linux-gnu/libdl.a -lm -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /build/libminc-2.4.05/testdir/minc2-multires-test.c: In function 'main': /build/libminc-2.4.05/testdir/minc2-multires-test.c:79:29: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 79 | coords[0] = i; @@ -4357,18 +4412,10 @@ /build/libminc-2.4.05/testdir/minc2-multires-test.c:83:25: warning: conversion to 'unsigned int' from 'int' may change the sign of the result [-Wsign-conversion] 83 | voxel = i*10000 + j*100 + k; | ^ -[ 82%] Built target minc2-datatype-test -make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' -[ 82%] Built target verify_xfm -make -f testdir/CMakeFiles/minc2-valid-test.dir/build.make testdir/CMakeFiles/minc2-valid-test.dir/depend -make -f testdir/CMakeFiles/minc2-vector_dimension-test.dir/build.make testdir/CMakeFiles/minc2-vector_dimension-test.dir/depend -make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' -cd /build/libminc-2.4.05/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.05 /build/libminc-2.4.05/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/CMakeFiles/minc2-valid-test.dir/DependInfo.cmake --color= -make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' -[ 83%] Linking C executable minc2-hyper-test-2 -make -f testdir/CMakeFiles/minc2-slice-test.dir/build.make testdir/CMakeFiles/minc2-slice-test.dir/build -make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' -cd /build/libminc-2.4.05/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.05 /build/libminc-2.4.05/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/CMakeFiles/minc2-vector_dimension-test.dir/DependInfo.cmake --color= +[ 83%] Building C object testdir/CMakeFiles/minc2-valid-test.dir/minc2-valid-test.c.o +[ 84%] Linking C executable minc2-grpattr-test +cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-grpattr-test.dir/link.txt --verbose=1 +cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/minc2-valid-test.dir/minc2-valid-test.c.o -MF CMakeFiles/minc2-valid-test.dir/minc2-valid-test.c.o.d -o CMakeFiles/minc2-valid-test.dir/minc2-valid-test.c.o -c /build/libminc-2.4.05/testdir/minc2-valid-test.c /build/libminc-2.4.05/testdir/minc2-record-test.c: In function 'main': /build/libminc-2.4.05/testdir/minc2-record-test.c:85:29: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 85 | coords[0] = i; @@ -4388,54 +4435,51 @@ /build/libminc-2.4.05/testdir/minc2-record-test.c:107:29: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 107 | coords[2] = k; | ^ +/build/libminc-2.4.05/testdir/minc2-slice-test.c: In function 'main': +/build/libminc-2.4.05/testdir/minc2-slice-test.c:29:21: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 29 | coords[0] = i; /*Z*/ + | ^ +/build/libminc-2.4.05/testdir/minc2-slice-test.c:30:21: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 30 | coords[1] = rand()%CX; /*X*/ + | ^~~~ +/build/libminc-2.4.05/testdir/minc2-slice-test.c:31:21: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] + 31 | coords[2] = rand()%CY; /*Y*/ + | ^~~~ +/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now "CMakeFiles/minc2-grpattr-test.dir/minc2-grpattr-test.c.o" -o minc2-grpattr-test -Wl,-rpath,/build/libminc-2.4.05/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.3.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libz.so -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/lib/x86_64-linux-gnu/libdl.a -lm -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' -cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-hyper-test-2.dir/link.txt --verbose=1 +[ 85%] Linking C executable minc2-slice-test +cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-slice-test.dir/link.txt --verbose=1 +[ 85%] Built target verify_xfm +make -f testdir/CMakeFiles/minc2-vector_dimension-test.dir/build.make testdir/CMakeFiles/minc2-vector_dimension-test.dir/depend make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' +cd /build/libminc-2.4.05/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.05 /build/libminc-2.4.05/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/CMakeFiles/minc2-vector_dimension-test.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' -[ 83%] Built target minc2-create-test-images +/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now "CMakeFiles/minc2-slice-test.dir/minc2-slice-test.c.o" -o minc2-slice-test -Wl,-rpath,/build/libminc-2.4.05/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.3.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libz.so -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/lib/x86_64-linux-gnu/libdl.a -lm -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so +[ 86%] Linking C executable minc2-record-test +cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-record-test.dir/link.txt --verbose=1 make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' -make -f testdir/CMakeFiles/minc2-valid-test.dir/build.make testdir/CMakeFiles/minc2-valid-test.dir/build -make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' make -f testdir/CMakeFiles/minc2-vector_dimension-test.dir/build.make testdir/CMakeFiles/minc2-vector_dimension-test.dir/build -/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now "CMakeFiles/minc2-hyper-test-2.dir/minc2-hyper-test-2.c.o" -o minc2-hyper-test-2 -Wl,-rpath,/build/libminc-2.4.05/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.3.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libz.so -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/lib/x86_64-linux-gnu/libdl.a -lm -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so -make -f testdir/CMakeFiles/minc2-volprops-test.dir/build.make testdir/CMakeFiles/minc2-volprops-test.dir/depend -[ 83%] Built target minc2-create-test-images-2 make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' +make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' +[ 86%] Built target minc2-create-test-images +[ 87%] Linking C executable minc2-label-test +cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-label-test.dir/link.txt --verbose=1 +make -f testdir/CMakeFiles/minc2-volprops-test.dir/build.make testdir/CMakeFiles/minc2-volprops-test.dir/depend make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' cd /build/libminc-2.4.05/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.05 /build/libminc-2.4.05/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/CMakeFiles/minc2-volprops-test.dir/DependInfo.cmake --color= +[ 87%] Building C object testdir/CMakeFiles/minc2-vector_dimension-test.dir/minc2-vector_dimension-test.c.o +cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/minc2-vector_dimension-test.dir/minc2-vector_dimension-test.c.o -MF CMakeFiles/minc2-vector_dimension-test.dir/minc2-vector_dimension-test.c.o.d -o CMakeFiles/minc2-vector_dimension-test.dir/minc2-vector_dimension-test.c.o -c /build/libminc-2.4.05/testdir/minc2-vector_dimension-test.c +/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now "CMakeFiles/minc2-label-test.dir/minc2-label-test.c.o" -o minc2-label-test -Wl,-rpath,/build/libminc-2.4.05/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.3.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libz.so -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/lib/x86_64-linux-gnu/libdl.a -lm -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so +[ 87%] Built target minc2-large-attribute +/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now "CMakeFiles/minc2-record-test.dir/minc2-record-test.c.o" -o minc2-record-test -Wl,-rpath,/build/libminc-2.4.05/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.3.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libz.so -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/lib/x86_64-linux-gnu/libdl.a -lm -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so make -f testdir/CMakeFiles/minc2-read-rgb.dir/build.make testdir/CMakeFiles/minc2-read-rgb.dir/depend -[ 83%] Building C object testdir/CMakeFiles/minc2-valid-test.dir/minc2-valid-test.c.o -[ 83%] Building C object testdir/CMakeFiles/minc2-slice-test.dir/minc2-slice-test.c.o +[ 87%] Linking C executable minc2-multires-test make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' cd /build/libminc-2.4.05/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.05 /build/libminc-2.4.05/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/CMakeFiles/minc2-read-rgb.dir/DependInfo.cmake --color= -cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/minc2-slice-test.dir/minc2-slice-test.c.o -MF CMakeFiles/minc2-slice-test.dir/minc2-slice-test.c.o.d -o CMakeFiles/minc2-slice-test.dir/minc2-slice-test.c.o -c /build/libminc-2.4.05/testdir/minc2-slice-test.c -cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/minc2-valid-test.dir/minc2-valid-test.c.o -MF CMakeFiles/minc2-valid-test.dir/minc2-valid-test.c.o.d -o CMakeFiles/minc2-valid-test.dir/minc2-valid-test.c.o -c /build/libminc-2.4.05/testdir/minc2-valid-test.c -[ 83%] Building C object testdir/CMakeFiles/minc2-vector_dimension-test.dir/minc2-vector_dimension-test.c.o -cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/minc2-vector_dimension-test.dir/minc2-vector_dimension-test.c.o -MF CMakeFiles/minc2-vector_dimension-test.dir/minc2-vector_dimension-test.c.o.d -o CMakeFiles/minc2-vector_dimension-test.dir/minc2-vector_dimension-test.c.o -c /build/libminc-2.4.05/testdir/minc2-vector_dimension-test.c +cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-multires-test.dir/link.txt --verbose=1 make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' make -f testdir/CMakeFiles/minc2-volprops-test.dir/build.make testdir/CMakeFiles/minc2-volprops-test.dir/build make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' -make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' -[ 84%] Building C object testdir/CMakeFiles/minc2-volprops-test.dir/minc2-volprops-test.c.o -make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' -[ 85%] Linking C executable minc2-grpattr-test -cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/minc2-volprops-test.dir/minc2-volprops-test.c.o -MF CMakeFiles/minc2-volprops-test.dir/minc2-volprops-test.c.o.d -o CMakeFiles/minc2-volprops-test.dir/minc2-volprops-test.c.o -c /build/libminc-2.4.05/testdir/minc2-volprops-test.c -cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-grpattr-test.dir/link.txt --verbose=1 -make -f testdir/CMakeFiles/minc2-read-rgb.dir/build.make testdir/CMakeFiles/minc2-read-rgb.dir/build -[ 85%] Linking C executable minc2-multires-test -make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' -cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-multires-test.dir/link.txt --verbose=1 -[ 86%] Linking C executable minc2-record-test -[ 86%] Built target minc2-large-attribute -cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-record-test.dir/link.txt --verbose=1 -make -f testdir/CMakeFiles/minc2-read-metadata.dir/build.make testdir/CMakeFiles/minc2-read-metadata.dir/depend -make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' -cd /build/libminc-2.4.05/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.05 /build/libminc-2.4.05/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/CMakeFiles/minc2-read-metadata.dir/DependInfo.cmake --color= -/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now "CMakeFiles/minc2-multires-test.dir/minc2-multires-test.c.o" -o minc2-multires-test -Wl,-rpath,/build/libminc-2.4.05/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.3.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libz.so -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/lib/x86_64-linux-gnu/libdl.a -lm -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so -/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now "CMakeFiles/minc2-record-test.dir/minc2-record-test.c.o" -o minc2-record-test -Wl,-rpath,/build/libminc-2.4.05/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.3.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libz.so -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/lib/x86_64-linux-gnu/libdl.a -lm -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so -[ 86%] Building C object testdir/CMakeFiles/minc2-read-rgb.dir/minc2-read-rgb.c.o -make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' -cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/minc2-read-rgb.dir/minc2-read-rgb.c.o -MF CMakeFiles/minc2-read-rgb.dir/minc2-read-rgb.c.o.d -o CMakeFiles/minc2-read-rgb.dir/minc2-read-rgb.c.o -c /build/libminc-2.4.05/testdir/minc2-read-rgb.c /build/libminc-2.4.05/testdir/minc2-vector_dimension-test.c: In function 'main': /build/libminc-2.4.05/testdir/minc2-vector_dimension-test.c:131:17: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 131 | coords[3] = i; @@ -4443,33 +4487,38 @@ /build/libminc-2.4.05/testdir/minc2-vector_dimension-test.c:166:17: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 166 | coords[0] = i; | ^ -/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now "CMakeFiles/minc2-grpattr-test.dir/minc2-grpattr-test.c.o" -o minc2-grpattr-test -Wl,-rpath,/build/libminc-2.4.05/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.3.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libz.so -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/lib/x86_64-linux-gnu/libdl.a -lm -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so -/build/libminc-2.4.05/testdir/minc2-slice-test.c: In function 'main': -/build/libminc-2.4.05/testdir/minc2-slice-test.c:29:21: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 29 | coords[0] = i; /*Z*/ - | ^ -/build/libminc-2.4.05/testdir/minc2-slice-test.c:30:21: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 30 | coords[1] = rand()%CX; /*X*/ - | ^~~~ -/build/libminc-2.4.05/testdir/minc2-slice-test.c:31:21: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] - 31 | coords[2] = rand()%CY; /*Y*/ - | ^~~~ +/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now "CMakeFiles/minc2-multires-test.dir/minc2-multires-test.c.o" -o minc2-multires-test -Wl,-rpath,/build/libminc-2.4.05/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.3.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libz.so -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/lib/x86_64-linux-gnu/libdl.a -lm -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' -[ 86%] Built target multidim_test -make -f testdir/CMakeFiles/minc2-read-metadata.dir/build.make testdir/CMakeFiles/minc2-read-metadata.dir/build +make -f testdir/CMakeFiles/minc2-read-rgb.dir/build.make testdir/CMakeFiles/minc2-read-rgb.dir/build +[ 88%] Building C object testdir/CMakeFiles/minc2-volprops-test.dir/minc2-volprops-test.c.o +make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' +make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' +cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/minc2-volprops-test.dir/minc2-volprops-test.c.o -MF CMakeFiles/minc2-volprops-test.dir/minc2-volprops-test.c.o.d -o CMakeFiles/minc2-volprops-test.dir/minc2-volprops-test.c.o -c /build/libminc-2.4.05/testdir/minc2-volprops-test.c +[ 89%] Linking C executable minc2-valid-test +cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-valid-test.dir/link.txt --verbose=1 +make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' +[ 89%] Building C object testdir/CMakeFiles/minc2-read-rgb.dir/minc2-read-rgb.c.o +cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/minc2-read-rgb.dir/minc2-read-rgb.c.o -MF CMakeFiles/minc2-read-rgb.dir/minc2-read-rgb.c.o.d -o CMakeFiles/minc2-read-rgb.dir/minc2-read-rgb.c.o -c /build/libminc-2.4.05/testdir/minc2-read-rgb.c +make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' +[ 89%] Built target minc2-datatype-test +/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now "CMakeFiles/minc2-valid-test.dir/minc2-valid-test.c.o" -o minc2-valid-test -Wl,-rpath,/build/libminc-2.4.05/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.3.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libz.so -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/lib/x86_64-linux-gnu/libdl.a -lm -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so +make -f testdir/CMakeFiles/minc2-read-metadata.dir/build.make testdir/CMakeFiles/minc2-read-metadata.dir/depend make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' +cd /build/libminc-2.4.05/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.05 /build/libminc-2.4.05/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/CMakeFiles/minc2-read-metadata.dir/DependInfo.cmake --color= +[ 89%] Built target minc2-create-test-images-2 +[ 89%] Built target minc2-convert-test make -f testdir/CMakeFiles/minc2-leak-test.dir/build.make testdir/CMakeFiles/minc2-leak-test.dir/depend make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' cd /build/libminc-2.4.05/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.05 /build/libminc-2.4.05/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/CMakeFiles/minc2-leak-test.dir/DependInfo.cmake --color= -[ 87%] Building C object testdir/CMakeFiles/minc2-read-metadata.dir/minc2-read-metadata.c.o +make -f testdir/CMakeFiles/minc2-float-voxel-test.dir/build.make testdir/CMakeFiles/minc2-float-voxel-test.dir/depend +make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' +make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' +cd /build/libminc-2.4.05/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.05 /build/libminc-2.4.05/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/CMakeFiles/minc2-float-voxel-test.dir/DependInfo.cmake --color= +make -f testdir/CMakeFiles/minc2-read-metadata.dir/build.make testdir/CMakeFiles/minc2-read-metadata.dir/build +make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' -[ 88%] Linking C executable minc2-label-test make -f testdir/CMakeFiles/minc2-leak-test.dir/build.make testdir/CMakeFiles/minc2-leak-test.dir/build -cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/minc2-read-metadata.dir/minc2-read-metadata.c.o -MF CMakeFiles/minc2-read-metadata.dir/minc2-read-metadata.c.o.d -o CMakeFiles/minc2-read-metadata.dir/minc2-read-metadata.c.o -c /build/libminc-2.4.05/testdir/minc2-read-metadata.c make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' -cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-label-test.dir/link.txt --verbose=1 -[ 89%] Building C object testdir/CMakeFiles/minc2-leak-test.dir/minc2-leak-test.c.o -cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/minc2-leak-test.dir/minc2-leak-test.c.o -MF CMakeFiles/minc2-leak-test.dir/minc2-leak-test.c.o.d -o CMakeFiles/minc2-leak-test.dir/minc2-leak-test.c.o -c /build/libminc-2.4.05/testdir/minc2-leak-test.c /build/libminc-2.4.05/testdir/minc2-read-rgb.c: In function 'calculate_mean_f': /build/libminc-2.4.05/testdir/minc2-read-rgb.c:23:13: warning: conversion from 'misize_t' {aka 'long long unsigned int'} to 'double' may change value [-Wconversion] 23 | return avg/length; @@ -4501,31 +4550,33 @@ /build/libminc-2.4.05/testdir/minc2-read-rgb.c:134:53: warning: conversion to 'misize_t' {aka 'long long unsigned int'} from 'int' may change the sign of the result [-Wsign-conversion] 134 | r = miget_dimension_separations(dim,MI_ORDER_FILE,ndim,step); | ^~~~ -[ 90%] Linking C executable minc2-slice-test -cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-slice-test.dir/link.txt --verbose=1 -[ 91%] Linking C executable minc2-valid-test -/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now "CMakeFiles/minc2-label-test.dir/minc2-label-test.c.o" -o minc2-label-test -Wl,-rpath,/build/libminc-2.4.05/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.3.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libz.so -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/lib/x86_64-linux-gnu/libdl.a -lm -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so -cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-valid-test.dir/link.txt --verbose=1 -/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now "CMakeFiles/minc2-slice-test.dir/minc2-slice-test.c.o" -o minc2-slice-test -Wl,-rpath,/build/libminc-2.4.05/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.3.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libz.so -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/lib/x86_64-linux-gnu/libdl.a -lm -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so -[ 91%] Linking C executable minc2-vector_dimension-test -/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now "CMakeFiles/minc2-valid-test.dir/minc2-valid-test.c.o" -o minc2-valid-test -Wl,-rpath,/build/libminc-2.4.05/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.3.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libz.so -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/lib/x86_64-linux-gnu/libdl.a -lm -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so -cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-vector_dimension-test.dir/link.txt --verbose=1 -[ 91%] Linking C executable minc2-volprops-test -cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-volprops-test.dir/link.txt --verbose=1 -/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now "CMakeFiles/minc2-vector_dimension-test.dir/minc2-vector_dimension-test.c.o" -o minc2-vector_dimension-test -Wl,-rpath,/build/libminc-2.4.05/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.3.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libz.so -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/lib/x86_64-linux-gnu/libdl.a -lm -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' -/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now "CMakeFiles/minc2-volprops-test.dir/minc2-volprops-test.c.o" -o minc2-volprops-test -Wl,-rpath,/build/libminc-2.4.05/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.3.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libz.so -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/lib/x86_64-linux-gnu/libdl.a -lm -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so -[ 91%] Built target minc2-full-test -make -f testdir/CMakeFiles/minc2-float-voxel-test.dir/build.make testdir/CMakeFiles/minc2-float-voxel-test.dir/depend -make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' -cd /build/libminc-2.4.05/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.05 /build/libminc-2.4.05/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/CMakeFiles/minc2-float-voxel-test.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' make -f testdir/CMakeFiles/minc2-float-voxel-test.dir/build.make testdir/CMakeFiles/minc2-float-voxel-test.dir/build +[ 90%] Building C object testdir/CMakeFiles/minc2-read-metadata.dir/minc2-read-metadata.c.o make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' -[ 92%] Building C object testdir/CMakeFiles/minc2-float-voxel-test.dir/minc2-float-voxel-test.c.o +[ 90%] Built target minc2-grpattr-test +cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/minc2-read-metadata.dir/minc2-read-metadata.c.o -MF CMakeFiles/minc2-read-metadata.dir/minc2-read-metadata.c.o.d -o CMakeFiles/minc2-read-metadata.dir/minc2-read-metadata.c.o -c /build/libminc-2.4.05/testdir/minc2-read-metadata.c +[ 90%] Linking C executable minc2-vector_dimension-test make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' +[ 91%] Building C object testdir/CMakeFiles/minc2-leak-test.dir/minc2-leak-test.c.o +cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/minc2-leak-test.dir/minc2-leak-test.c.o -MF CMakeFiles/minc2-leak-test.dir/minc2-leak-test.c.o.d -o CMakeFiles/minc2-leak-test.dir/minc2-leak-test.c.o -c /build/libminc-2.4.05/testdir/minc2-leak-test.c +cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-vector_dimension-test.dir/link.txt --verbose=1 +[ 92%] Building C object testdir/CMakeFiles/minc2-float-voxel-test.dir/minc2-float-voxel-test.c.o +[ 92%] Built target minc2-full-test cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT testdir/CMakeFiles/minc2-float-voxel-test.dir/minc2-float-voxel-test.c.o -MF CMakeFiles/minc2-float-voxel-test.dir/minc2-float-voxel-test.c.o.d -o CMakeFiles/minc2-float-voxel-test.dir/minc2-float-voxel-test.c.o -c /build/libminc-2.4.05/testdir/minc2-float-voxel-test.c +make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' +/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now "CMakeFiles/minc2-vector_dimension-test.dir/minc2-vector_dimension-test.c.o" -o minc2-vector_dimension-test -Wl,-rpath,/build/libminc-2.4.05/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.3.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libz.so -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/lib/x86_64-linux-gnu/libdl.a -lm -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so +make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' [ 92%] Built target minc2-hyper-test-2 +[ 92%] Linking C executable minc2-volprops-test +cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-volprops-test.dir/link.txt --verbose=1 +[ 92%] Built target minc2-slice-test +/build/libminc-2.4.05/testdir/minc2-float-voxel-test.c: In function 'main': +/build/libminc-2.4.05/testdir/minc2-float-voxel-test.c:144:9: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] + 144 | return(error_count); + | ^ +/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now "CMakeFiles/minc2-volprops-test.dir/minc2-volprops-test.c.o" -o minc2-volprops-test -Wl,-rpath,/build/libminc-2.4.05/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.3.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libz.so -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/lib/x86_64-linux-gnu/libdl.a -lm -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /build/libminc-2.4.05/testdir/minc2-leak-test.c: In function 'check_high_water_mark': /build/libminc-2.4.05/testdir/minc2-leak-test.c:36:15: warning: conversion from 'long int' to 'int' may change value [-Wconversion] 36 | return usage.ru_maxrss; @@ -4568,49 +4619,41 @@ 306 | result = miget_dimension_sizes(dimensions, ndims, sizes); | ^~~~~ make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' +[ 92%] Built target minc2-record-test +[ 92%] Linking C executable minc2-float-voxel-test +cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-float-voxel-test.dir/link.txt --verbose=1 [ 92%] Linking C executable minc2-read-metadata cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-read-metadata.dir/link.txt --verbose=1 -[ 92%] Built target minc2-grpattr-test +/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now "CMakeFiles/minc2-float-voxel-test.dir/minc2-float-voxel-test.c.o" -o minc2-float-voxel-test -Wl,-rpath,/build/libminc-2.4.05/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.3.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libz.so -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/lib/x86_64-linux-gnu/libdl.a -lm -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now "CMakeFiles/minc2-read-metadata.dir/minc2-read-metadata.c.o" -o minc2-read-metadata -Wl,-rpath,/build/libminc-2.4.05/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.3.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libz.so -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/lib/x86_64-linux-gnu/libdl.a -lm -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so -/build/libminc-2.4.05/testdir/minc2-float-voxel-test.c: In function 'main': -/build/libminc-2.4.05/testdir/minc2-float-voxel-test.c:144:9: warning: conversion from 'double' to 'int' may change value [-Wfloat-conversion] - 144 | return(error_count); - | ^ -make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' -[ 92%] Built target minc2-multires-test -[ 92%] Linking C executable minc2-float-voxel-test -cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-float-voxel-test.dir/link.txt --verbose=1 -make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' [ 92%] Linking C executable minc2-leak-test cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-leak-test.dir/link.txt --verbose=1 -/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now "CMakeFiles/minc2-float-voxel-test.dir/minc2-float-voxel-test.c.o" -o minc2-float-voxel-test -Wl,-rpath,/build/libminc-2.4.05/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.3.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libz.so -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/lib/x86_64-linux-gnu/libdl.a -lm -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so -[ 93%] Linking C executable minc2-hyper-test +/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now "CMakeFiles/minc2-leak-test.dir/minc2-leak-test.c.o" -o minc2-leak-test -Wl,-rpath,/build/libminc-2.4.05/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.3.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libz.so -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/lib/x86_64-linux-gnu/libdl.a -lm -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' -cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-hyper-test.dir/link.txt --verbose=1 -[ 93%] Built target minc2-label-test make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' +[ 92%] Built target minc2-multires-test +[ 92%] Built target minc2-label-test +[ 93%] Linking C executable minc2-read-rgb +cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-read-rgb.dir/link.txt --verbose=1 +make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' +/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now "CMakeFiles/minc2-read-rgb.dir/minc2-read-rgb.c.o" -o minc2-read-rgb -Wl,-rpath,/build/libminc-2.4.05/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.3.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libz.so -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/lib/x86_64-linux-gnu/libdl.a -lm -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so +[ 94%] Linking C executable minc2-hyper-test +cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-hyper-test.dir/link.txt --verbose=1 +[ 94%] Built target minc2-volprops-test /usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now "CMakeFiles/minc2-hyper-test.dir/minc2-hyper-test.c.o" -o minc2-hyper-test -Wl,-rpath,/build/libminc-2.4.05/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.3.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libz.so -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/lib/x86_64-linux-gnu/libdl.a -lm -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so -/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now "CMakeFiles/minc2-leak-test.dir/minc2-leak-test.c.o" -o minc2-leak-test -Wl,-rpath,/build/libminc-2.4.05/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.3.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libz.so -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/lib/x86_64-linux-gnu/libdl.a -lm -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so -[ 93%] Built target minc2-record-test -[ 93%] Built target minc2-slice-test make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' +[ 94%] Built target minc2-valid-test make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' -[ 93%] Built target minc2-vector_dimension-test -[ 93%] Built target minc2-volprops-test -[ 93%] Built target minc2-valid-test -[ 94%] Linking C executable minc2-read-rgb -cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc2-read-rgb.dir/link.txt --verbose=1 -/usr/bin/cc -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now "CMakeFiles/minc2-read-rgb.dir/minc2-read-rgb.c.o" -o minc2-read-rgb -Wl,-rpath,/build/libminc-2.4.05/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc2.so.5.3.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libz.so -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/lib/x86_64-linux-gnu/libdl.a -lm -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' +[ 94%] Built target minc2-float-voxel-test +[ 94%] Built target minc2-vector_dimension-test [ 94%] Built target minc2-read-metadata make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' +[ 94%] Built target minc2-read-rgb make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' -[ 94%] Built target minc2-float-voxel-test [ 94%] Built target minc2-hyper-test make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' -make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' -[ 94%] Built target minc2-read-rgb [ 94%] Built target minc2-leak-test [ 94%] Linking CXX shared library libminc_io.so cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/ezminc && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc_io.dir/link.txt --verbose=1 @@ -4623,50 +4666,50 @@ make -f ezminc/examples/CMakeFiles/volume_msq_dist.dir/build.make ezminc/examples/CMakeFiles/volume_msq_dist.dir/depend make -f ezminc/examples/CMakeFiles/create_grid_file.dir/build.make ezminc/examples/CMakeFiles/create_grid_file.dir/depend make -f ezminc/tests/CMakeFiles/ezminc_rw_test.dir/build.make ezminc/tests/CMakeFiles/ezminc_rw_test.dir/depend -make -f ezminc/tests/CMakeFiles/ezminc_rw_test2.dir/build.make ezminc/tests/CMakeFiles/ezminc_rw_test2.dir/depend make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' cd /build/libminc-2.4.05/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.05 /build/libminc-2.4.05/ezminc/examples /build/libminc-2.4.05/obj-x86_64-linux-gnu /build/libminc-2.4.05/obj-x86_64-linux-gnu/ezminc/examples /build/libminc-2.4.05/obj-x86_64-linux-gnu/ezminc/examples/CMakeFiles/trilinear_resample.dir/DependInfo.cmake --color= +make -f ezminc/tests/CMakeFiles/ezminc_rw_test2.dir/build.make ezminc/tests/CMakeFiles/ezminc_rw_test2.dir/depend make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' cd /build/libminc-2.4.05/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.05 /build/libminc-2.4.05/ezminc/examples /build/libminc-2.4.05/obj-x86_64-linux-gnu /build/libminc-2.4.05/obj-x86_64-linux-gnu/ezminc/examples /build/libminc-2.4.05/obj-x86_64-linux-gnu/ezminc/examples/CMakeFiles/volume_avg.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' -cd /build/libminc-2.4.05/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.05 /build/libminc-2.4.05/ezminc/examples /build/libminc-2.4.05/obj-x86_64-linux-gnu /build/libminc-2.4.05/obj-x86_64-linux-gnu/ezminc/examples /build/libminc-2.4.05/obj-x86_64-linux-gnu/ezminc/examples/CMakeFiles/volume_msq_dist.dir/DependInfo.cmake --color= -make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' -cd /build/libminc-2.4.05/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.05 /build/libminc-2.4.05/ezminc/examples /build/libminc-2.4.05/obj-x86_64-linux-gnu /build/libminc-2.4.05/obj-x86_64-linux-gnu/ezminc/examples /build/libminc-2.4.05/obj-x86_64-linux-gnu/ezminc/examples/CMakeFiles/create_grid_file.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' cd /build/libminc-2.4.05/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.05 /build/libminc-2.4.05/ezminc/tests /build/libminc-2.4.05/obj-x86_64-linux-gnu /build/libminc-2.4.05/obj-x86_64-linux-gnu/ezminc/tests /build/libminc-2.4.05/obj-x86_64-linux-gnu/ezminc/tests/CMakeFiles/ezminc_rw_test.dir/DependInfo.cmake --color= +cd /build/libminc-2.4.05/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.05 /build/libminc-2.4.05/ezminc/examples /build/libminc-2.4.05/obj-x86_64-linux-gnu /build/libminc-2.4.05/obj-x86_64-linux-gnu/ezminc/examples /build/libminc-2.4.05/obj-x86_64-linux-gnu/ezminc/examples/CMakeFiles/create_grid_file.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' cd /build/libminc-2.4.05/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.05 /build/libminc-2.4.05/ezminc/tests /build/libminc-2.4.05/obj-x86_64-linux-gnu /build/libminc-2.4.05/obj-x86_64-linux-gnu/ezminc/tests /build/libminc-2.4.05/obj-x86_64-linux-gnu/ezminc/tests/CMakeFiles/ezminc_rw_test2.dir/DependInfo.cmake --color= +make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' +cd /build/libminc-2.4.05/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libminc-2.4.05 /build/libminc-2.4.05/ezminc/examples /build/libminc-2.4.05/obj-x86_64-linux-gnu /build/libminc-2.4.05/obj-x86_64-linux-gnu/ezminc/examples /build/libminc-2.4.05/obj-x86_64-linux-gnu/ezminc/examples/CMakeFiles/volume_msq_dist.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' -make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' -make -f ezminc/examples/CMakeFiles/create_grid_file.dir/build.make ezminc/examples/CMakeFiles/create_grid_file.dir/build make -f ezminc/examples/CMakeFiles/volume_avg.dir/build.make ezminc/examples/CMakeFiles/volume_avg.dir/build -make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' +make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' make -f ezminc/tests/CMakeFiles/ezminc_rw_test2.dir/build.make ezminc/tests/CMakeFiles/ezminc_rw_test2.dir/build make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' +make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' +make -f ezminc/examples/CMakeFiles/create_grid_file.dir/build.make ezminc/examples/CMakeFiles/create_grid_file.dir/build +make -f ezminc/tests/CMakeFiles/ezminc_rw_test.dir/build.make ezminc/tests/CMakeFiles/ezminc_rw_test.dir/build +make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' make -f ezminc/examples/CMakeFiles/trilinear_resample.dir/build.make ezminc/examples/CMakeFiles/trilinear_resample.dir/build make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' -make -f ezminc/tests/CMakeFiles/ezminc_rw_test.dir/build.make ezminc/tests/CMakeFiles/ezminc_rw_test.dir/build make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' make -f ezminc/examples/CMakeFiles/volume_msq_dist.dir/build.make ezminc/examples/CMakeFiles/volume_msq_dist.dir/build make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' -make[3]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' -[ 94%] Building CXX object ezminc/examples/CMakeFiles/volume_avg.dir/volume_avg.cpp.o [ 95%] Building CXX object ezminc/examples/CMakeFiles/create_grid_file.dir/create_grid_file.cpp.o -[ 95%] Building CXX object ezminc/tests/CMakeFiles/ezminc_rw_test2.dir/minc_rw_test2.cpp.o -[ 96%] Building CXX object ezminc/examples/CMakeFiles/trilinear_resample.dir/trilinear_resample.cpp.o +[ 95%] Building CXX object ezminc/examples/CMakeFiles/volume_avg.dir/volume_avg.cpp.o cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/ezminc/examples && /usr/bin/c++ -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT ezminc/examples/CMakeFiles/create_grid_file.dir/create_grid_file.cpp.o -MF CMakeFiles/create_grid_file.dir/create_grid_file.cpp.o.d -o CMakeFiles/create_grid_file.dir/create_grid_file.cpp.o -c /build/libminc-2.4.05/ezminc/examples/create_grid_file.cpp -[ 97%] Building CXX object ezminc/tests/CMakeFiles/ezminc_rw_test.dir/ezminc_rw_test.cpp.o -[ 97%] Building CXX object ezminc/examples/CMakeFiles/volume_msq_dist.dir/volume_msq_dist.cpp.o +[ 96%] Building CXX object ezminc/tests/CMakeFiles/ezminc_rw_test2.dir/minc_rw_test2.cpp.o +[ 96%] Building CXX object ezminc/tests/CMakeFiles/ezminc_rw_test.dir/ezminc_rw_test.cpp.o cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/ezminc/examples && /usr/bin/c++ -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT ezminc/examples/CMakeFiles/volume_avg.dir/volume_avg.cpp.o -MF CMakeFiles/volume_avg.dir/volume_avg.cpp.o.d -o CMakeFiles/volume_avg.dir/volume_avg.cpp.o -c /build/libminc-2.4.05/ezminc/examples/volume_avg.cpp cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/ezminc/tests && /usr/bin/c++ -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT ezminc/tests/CMakeFiles/ezminc_rw_test2.dir/minc_rw_test2.cpp.o -MF CMakeFiles/ezminc_rw_test2.dir/minc_rw_test2.cpp.o.d -o CMakeFiles/ezminc_rw_test2.dir/minc_rw_test2.cpp.o -c /build/libminc-2.4.05/ezminc/tests/minc_rw_test2.cpp -cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/ezminc/examples && /usr/bin/c++ -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT ezminc/examples/CMakeFiles/trilinear_resample.dir/trilinear_resample.cpp.o -MF CMakeFiles/trilinear_resample.dir/trilinear_resample.cpp.o.d -o CMakeFiles/trilinear_resample.dir/trilinear_resample.cpp.o -c /build/libminc-2.4.05/ezminc/examples/trilinear_resample.cpp cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/ezminc/tests && /usr/bin/c++ -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT ezminc/tests/CMakeFiles/ezminc_rw_test.dir/ezminc_rw_test.cpp.o -MF CMakeFiles/ezminc_rw_test.dir/ezminc_rw_test.cpp.o.d -o CMakeFiles/ezminc_rw_test.dir/ezminc_rw_test.cpp.o -c /build/libminc-2.4.05/ezminc/tests/ezminc_rw_test.cpp +[ 97%] Building CXX object ezminc/examples/CMakeFiles/trilinear_resample.dir/trilinear_resample.cpp.o +[ 97%] Building CXX object ezminc/examples/CMakeFiles/volume_msq_dist.dir/volume_msq_dist.cpp.o cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/ezminc/examples && /usr/bin/c++ -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT ezminc/examples/CMakeFiles/volume_msq_dist.dir/volume_msq_dist.cpp.o -MF CMakeFiles/volume_msq_dist.dir/volume_msq_dist.cpp.o.d -o CMakeFiles/volume_msq_dist.dir/volume_msq_dist.cpp.o -c /build/libminc-2.4.05/ezminc/examples/volume_msq_dist.cpp -In file included from /build/libminc-2.4.05/ezminc/examples/trilinear_resample.cpp:15: +cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/ezminc/examples && /usr/bin/c++ -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DMINC2 -DMINC2=1 -D_XOPEN_SOURCE=500 -I/build/libminc-2.4.05/ezminc -I/build/libminc-2.4.05 -I/build/libminc-2.4.05/obj-x86_64-linux-gnu -I/build/libminc-2.4.05/libcommon -I/build/libminc-2.4.05/libsrc2 -I/build/libminc-2.4.05/libsrc -I/build/libminc-2.4.05/volume_io/Include -I/usr/include/hdf5/serial -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -MD -MT ezminc/examples/CMakeFiles/trilinear_resample.dir/trilinear_resample.cpp.o -MF CMakeFiles/trilinear_resample.dir/trilinear_resample.cpp.o.d -o CMakeFiles/trilinear_resample.dir/trilinear_resample.cpp.o -c /build/libminc-2.4.05/ezminc/examples/trilinear_resample.cpp +In file included from /build/libminc-2.4.05/ezminc/examples/volume_msq_dist.cpp:15: /build/libminc-2.4.05/ezminc/minc_1_rw.h: In member function 'bool minc::minc_1_base::next_slice()': /build/libminc-2.4.05/ezminc/minc_1_rw.h:147:41: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 147 | for(int i=_ndims-_slice_dimensions-1;i>=0;i--) @@ -4678,8 +4721,40 @@ /build/libminc-2.4.05/ezminc/minc_1_rw.h: In member function 'int minc::minc_1_base::ndim(int) const': /build/libminc-2.4.05/ezminc/minc_1_rw.h:203:32: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 203 | if(j>=0) return _info[j].length; -In file included from /build/libminc-2.4.05/ezminc/minc_1_simple.h:18, - from /build/libminc-2.4.05/ezminc/examples/create_grid_file.cpp:5: +In file included from /build/libminc-2.4.05/ezminc/examples/volume_msq_dist.cpp:17: +/build/libminc-2.4.05/ezminc/minc_1_simple.h: In instantiation of 'void minc::load_standard_volume(minc_1_reader&, T*) [with T = float]': +/build/libminc-2.4.05/ezminc/examples/volume_msq_dist.cpp:70:32: required from here +/build/libminc-2.4.05/ezminc/minc_1_simple.h:215:23: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + 215 | if(rw.map_space(i)<0) continue; + | ^ +/build/libminc-2.4.05/ezminc/minc_1_simple.h:216:28: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + 216 | strides[rw.map_space(i)]=str; + | ^ +/build/libminc-2.4.05/ezminc/minc_1_simple.h:217:20: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + 217 | str*=rw.ndim(i); + | ^ +/build/libminc-2.4.05/ezminc/minc_1_simple.h: In instantiation of 'void minc::load_standard_volume(minc_1_reader&, T*) [with T = unsigned char]': +/build/libminc-2.4.05/ezminc/examples/volume_msq_dist.cpp:72:40: required from here +/build/libminc-2.4.05/ezminc/minc_1_simple.h:215:23: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + 215 | if(rw.map_space(i)<0) continue; + | ^ +/build/libminc-2.4.05/ezminc/minc_1_simple.h:216:28: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + 216 | strides[rw.map_space(i)]=str; + | ^ +/build/libminc-2.4.05/ezminc/minc_1_simple.h:217:20: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + 217 | str*=rw.ndim(i); + | ^ +/build/libminc-2.4.05/ezminc/minc_1_simple.h: In instantiation of 'bool minc::minc_input_iterator::next() [with T = float]': +/build/libminc-2.4.05/ezminc/minc_1_simple.h:221:38: required from 'void minc::load_standard_volume(minc_1_reader&, T*) [with T = float]' +/build/libminc-2.4.05/ezminc/examples/volume_msq_dist.cpp:70:32: required from here +/build/libminc-2.4.05/ezminc/minc_1_simple.h:66:47: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'unsigned int' may change value [-Wconversion] + 66 | if(_cur[i](_rw->dim(i).length)) + | ^ +/build/libminc-2.4.05/ezminc/minc_1_simple.h: In instantiation of 'bool minc::minc_input_iterator::next() [with T = unsigned char]': +/build/libminc-2.4.05/ezminc/minc_1_simple.h:221:38: required from 'void minc::load_standard_volume(minc_1_reader&, T*) [with T = unsigned char]' +/build/libminc-2.4.05/ezminc/examples/volume_msq_dist.cpp:72:40: required from here +/build/libminc-2.4.05/ezminc/minc_1_simple.h:66:47: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'unsigned int' may change value [-Wconversion] +In file included from /build/libminc-2.4.05/ezminc/tests/minc_rw_test2.cpp:1: /build/libminc-2.4.05/ezminc/minc_1_rw.h: In member function 'bool minc::minc_1_base::next_slice()': /build/libminc-2.4.05/ezminc/minc_1_rw.h:147:41: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 147 | for(int i=_ndims-_slice_dimensions-1;i>=0;i--) @@ -4691,7 +4766,8 @@ /build/libminc-2.4.05/ezminc/minc_1_rw.h: In member function 'int minc::minc_1_base::ndim(int) const': /build/libminc-2.4.05/ezminc/minc_1_rw.h:203:32: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 203 | if(j>=0) return _info[j].length; -In file included from /build/libminc-2.4.05/ezminc/examples/volume_msq_dist.cpp:15: +In file included from /build/libminc-2.4.05/ezminc/minc_1_simple.h:18, + from /build/libminc-2.4.05/ezminc/examples/create_grid_file.cpp:5: /build/libminc-2.4.05/ezminc/minc_1_rw.h: In member function 'bool minc::minc_1_base::next_slice()': /build/libminc-2.4.05/ezminc/minc_1_rw.h:147:41: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 147 | for(int i=_ndims-_slice_dimensions-1;i>=0;i--) @@ -4703,34 +4779,7 @@ /build/libminc-2.4.05/ezminc/minc_1_rw.h: In member function 'int minc::minc_1_base::ndim(int) const': /build/libminc-2.4.05/ezminc/minc_1_rw.h:203:32: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 203 | if(j>=0) return _info[j].length; -/build/libminc-2.4.05/ezminc/examples/trilinear_resample.cpp: In function 'int main(int, char**)': -/build/libminc-2.4.05/ezminc/examples/trilinear_resample.cpp:90:48: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] - 90 | old_step[i-1]=new_info[rdr.map_space(i)].step; -/build/libminc-2.4.05/ezminc/examples/trilinear_resample.cpp:91:49: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] - 91 | old_start[i-1]=new_info[rdr.map_space(i)].start; -/build/libminc-2.4.05/ezminc/examples/trilinear_resample.cpp:93:45: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'float' may change value [-Wconversion] - 93 | float len=(new_info[rdr.map_space(i)].length)*old_step[i-1]; - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~ -/build/libminc-2.4.05/ezminc/examples/trilinear_resample.cpp:98:49: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] - 98 | new_start[i-1]=new_info[rdr.map_space(i)].start; -/build/libminc-2.4.05/ezminc/examples/trilinear_resample.cpp:100:58: warning: conversion from 'double' to 'size_t' {aka 'long unsigned int'} may change value [-Wfloat-conversion] - 100 | new_len[i-1]=new_info[rdr.map_space(i)].length=ceil(fabs(len/_step)); - | ~~~~^~~~~~~~~~~~~~~~~ -/build/libminc-2.4.05/ezminc/examples/trilinear_resample.cpp:100:53: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - 100 | new_len[i-1]=new_info[rdr.map_space(i)].length=ceil(fabs(len/_step)); -/build/libminc-2.4.05/ezminc/examples/trilinear_resample.cpp:109:51: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] - 109 | minc::fixed_vec<3,float> cc=IDX(x*_step,y*_step,z*_step); - | ~^~~~~~ -/build/libminc-2.4.05/ezminc/examples/trilinear_resample.cpp:109:59: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] - 109 | minc::fixed_vec<3,float> cc=IDX(x*_step,y*_step,z*_step); - | ~^~~~~~ -/build/libminc-2.4.05/ezminc/examples/trilinear_resample.cpp:109:67: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] - 109 | minc::fixed_vec<3,float> cc=IDX(x*_step,y*_step,z*_step); - | ~^~~~~~ -/build/libminc-2.4.05/ezminc/examples/trilinear_resample.cpp:115:53: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] - 115 | output_vol.set(x,y,z,input_vol.interpolate(cc[0],cc[1],cc[2])); - | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ -In file included from /build/libminc-2.4.05/ezminc/tests/minc_rw_test2.cpp:1: +In file included from /build/libminc-2.4.05/ezminc/examples/volume_avg.cpp:15: /build/libminc-2.4.05/ezminc/minc_1_rw.h: In member function 'bool minc::minc_1_base::next_slice()': /build/libminc-2.4.05/ezminc/minc_1_rw.h:147:41: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 147 | for(int i=_ndims-_slice_dimensions-1;i>=0;i--) @@ -4742,30 +4791,7 @@ /build/libminc-2.4.05/ezminc/minc_1_rw.h: In member function 'int minc::minc_1_base::ndim(int) const': /build/libminc-2.4.05/ezminc/minc_1_rw.h:203:32: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 203 | if(j>=0) return _info[j].length; -In file included from /build/libminc-2.4.05/ezminc/examples/volume_msq_dist.cpp:17: -/build/libminc-2.4.05/ezminc/minc_1_simple.h: In instantiation of 'void minc::load_standard_volume(minc_1_reader&, T*) [with T = float]': -/build/libminc-2.4.05/ezminc/examples/volume_msq_dist.cpp:70:32: required from here -/build/libminc-2.4.05/ezminc/minc_1_simple.h:215:23: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - 215 | if(rw.map_space(i)<0) continue; - | ^ -/build/libminc-2.4.05/ezminc/minc_1_simple.h:216:28: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - 216 | strides[rw.map_space(i)]=str; - | ^ -/build/libminc-2.4.05/ezminc/minc_1_simple.h:217:20: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - 217 | str*=rw.ndim(i); - | ^ -/build/libminc-2.4.05/ezminc/minc_1_simple.h: In instantiation of 'void minc::load_standard_volume(minc_1_reader&, T*) [with T = unsigned char]': -/build/libminc-2.4.05/ezminc/examples/volume_msq_dist.cpp:72:40: required from here -/build/libminc-2.4.05/ezminc/minc_1_simple.h:215:23: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - 215 | if(rw.map_space(i)<0) continue; - | ^ -/build/libminc-2.4.05/ezminc/minc_1_simple.h:216:28: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - 216 | strides[rw.map_space(i)]=str; - | ^ -/build/libminc-2.4.05/ezminc/minc_1_simple.h:217:20: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - 217 | str*=rw.ndim(i); - | ^ -In file included from /build/libminc-2.4.05/ezminc/examples/volume_avg.cpp:15: +In file included from /build/libminc-2.4.05/ezminc/examples/trilinear_resample.cpp:15: /build/libminc-2.4.05/ezminc/minc_1_rw.h: In member function 'bool minc::minc_1_base::next_slice()': /build/libminc-2.4.05/ezminc/minc_1_rw.h:147:41: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 147 | for(int i=_ndims-_slice_dimensions-1;i>=0;i--) @@ -4777,20 +4803,23 @@ /build/libminc-2.4.05/ezminc/minc_1_rw.h: In member function 'int minc::minc_1_base::ndim(int) const': /build/libminc-2.4.05/ezminc/minc_1_rw.h:203:32: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 203 | if(j>=0) return _info[j].length; -/build/libminc-2.4.05/ezminc/minc_1_simple.h: In instantiation of 'bool minc::minc_input_iterator::next() [with T = float]': -/build/libminc-2.4.05/ezminc/minc_1_simple.h:221:38: required from 'void minc::load_standard_volume(minc_1_reader&, T*) [with T = float]' -/build/libminc-2.4.05/ezminc/examples/volume_msq_dist.cpp:70:32: required from here -/build/libminc-2.4.05/ezminc/minc_1_simple.h:66:47: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'unsigned int' may change value [-Wconversion] - 66 | if(_cur[i](_rw->dim(i).length)) - | ^ -/build/libminc-2.4.05/ezminc/minc_1_simple.h: In instantiation of 'bool minc::minc_input_iterator::next() [with T = unsigned char]': -/build/libminc-2.4.05/ezminc/minc_1_simple.h:221:38: required from 'void minc::load_standard_volume(minc_1_reader&, T*) [with T = unsigned char]' -/build/libminc-2.4.05/ezminc/examples/volume_msq_dist.cpp:72:40: required from here -/build/libminc-2.4.05/ezminc/minc_1_simple.h:66:47: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'unsigned int' may change value [-Wconversion] -In file included from /build/libminc-2.4.05/ezminc/minc_1_simple_rw.h:19, - from /build/libminc-2.4.05/ezminc/examples/trilinear_resample.cpp:18: +/build/libminc-2.4.05/ezminc/tests/minc_rw_test2.cpp: In function 'int main(int, char**)': +/build/libminc-2.4.05/ezminc/tests/minc_rw_test2.cpp:27:25: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'float' may change value [-Wconversion] + 27 | vol(x,y,z)=x+y+z; + | ~~~^~ +/build/libminc-2.4.05/ezminc/examples/create_grid_file.cpp: In function 'int main(int, char**)': +/build/libminc-2.4.05/ezminc/examples/create_grid_file.cpp:115:17: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] + 115 | def[0]=amp*sin(M_PI*pos[0]/100.0); + | ~~~^~~~~~~~~~~~~~~~~~~~~~~ +/build/libminc-2.4.05/ezminc/examples/create_grid_file.cpp:116:17: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] + 116 | def[1]=amp*sin(2*M_PI*pos[1]/100.0); + | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~ +/build/libminc-2.4.05/ezminc/examples/create_grid_file.cpp:117:17: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] + 117 | def[2]=amp*cos(3*M_PI*pos[2]/100.0); + | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~ +In file included from /build/libminc-2.4.05/ezminc/tests/minc_rw_test2.cpp:4: /build/libminc-2.4.05/ezminc/minc_io_simple_volume.h: In instantiation of 'minc::simple_volume::simple_volume() [with T = float]': -/build/libminc-2.4.05/ezminc/examples/trilinear_resample.cpp:80:26: required from here +/build/libminc-2.4.05/ezminc/tests/minc_rw_test2.cpp:19:26: required from here /build/libminc-2.4.05/ezminc/minc_io_simple_volume.h:185:17: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 185 | _size[i]=0; | ^ @@ -4803,85 +4832,52 @@ /build/libminc-2.4.05/ezminc/minc_io_simple_volume.h:190:33: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 190 | _direction_cosines[i][i]=1.0; | ^ -/build/libminc-2.4.05/ezminc/minc_io_simple_volume.h: In instantiation of 'double minc::simple_volume::interpolate(float, float, float) const [with T = float]': -/build/libminc-2.4.05/ezminc/examples/trilinear_resample.cpp:115:53: required from here -/build/libminc-2.4.05/ezminc/minc_io_simple_volume.h:327:23: warning: conversion from 'float' to 'size_t' {aka 'long unsigned int'} may change value [-Wfloat-conversion] - 327 | size_t x=floor(_x); - | ~~~~~^~~~ -/build/libminc-2.4.05/ezminc/minc_io_simple_volume.h:328:23: warning: conversion from 'float' to 'size_t' {aka 'long unsigned int'} may change value [-Wfloat-conversion] - 328 | size_t y=floor(_y); - | ~~~~~^~~~ -/build/libminc-2.4.05/ezminc/minc_io_simple_volume.h:329:23: warning: conversion from 'float' to 'size_t' {aka 'long unsigned int'} may change value [-Wfloat-conversion] - 329 | size_t z=floor(_z); - | ~~~~~^~~~ -/build/libminc-2.4.05/ezminc/minc_io_simple_volume.h:331:21: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'float' may change value [-Wconversion] - 331 | float dx=_x-x; - | ^ -/build/libminc-2.4.05/ezminc/minc_io_simple_volume.h:332:21: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'float' may change value [-Wconversion] - 332 | float dy=_y-y; - | ^ -/build/libminc-2.4.05/ezminc/minc_io_simple_volume.h:333:21: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'float' may change value [-Wconversion] - 333 | float dz=_z-z; - | ^ -/build/libminc-2.4.05/ezminc/examples/create_grid_file.cpp: In function 'int main(int, char**)': -/build/libminc-2.4.05/ezminc/examples/create_grid_file.cpp:115:17: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] - 115 | def[0]=amp*sin(M_PI*pos[0]/100.0); - | ~~~^~~~~~~~~~~~~~~~~~~~~~~ -/build/libminc-2.4.05/ezminc/examples/create_grid_file.cpp:116:17: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] - 116 | def[1]=amp*sin(2*M_PI*pos[1]/100.0); - | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -/build/libminc-2.4.05/ezminc/examples/create_grid_file.cpp:117:17: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] - 117 | def[2]=amp*cos(3*M_PI*pos[2]/100.0); - | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -In file included from /build/libminc-2.4.05/ezminc/examples/trilinear_resample.cpp:17: -/build/libminc-2.4.05/ezminc/minc_1_simple.h: In instantiation of 'void minc::load_standard_volume(minc_1_reader&, T*) [with T = float]': -/build/libminc-2.4.05/ezminc/minc_1_simple_rw.h:36:27: required from 'void minc::load_simple_volume(minc_1_reader&, simple_volume&) [with T = float]' -/build/libminc-2.4.05/ezminc/examples/trilinear_resample.cpp:81:30: required from here -/build/libminc-2.4.05/ezminc/minc_1_simple.h:215:23: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - 215 | if(rw.map_space(i)<0) continue; - | ^ -/build/libminc-2.4.05/ezminc/minc_1_simple.h:216:28: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - 216 | strides[rw.map_space(i)]=str; - | ^ -/build/libminc-2.4.05/ezminc/minc_1_simple.h:217:20: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - 217 | str*=rw.ndim(i); - | ^ -/build/libminc-2.4.05/ezminc/minc_1_simple.h: In instantiation of 'void minc::load_standard_volume(minc_1_reader&, T*) [with T = double]': -/build/libminc-2.4.05/ezminc/minc_1_simple_rw.h:56:35: required from 'void minc::load_simple_volume(minc_1_reader&, simple_volume&) [with T = float]' -/build/libminc-2.4.05/ezminc/examples/trilinear_resample.cpp:81:30: required from here -/build/libminc-2.4.05/ezminc/minc_1_simple.h:215:23: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - 215 | if(rw.map_space(i)<0) continue; - | ^ -/build/libminc-2.4.05/ezminc/minc_1_simple.h:216:28: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - 216 | strides[rw.map_space(i)]=str; - | ^ -/build/libminc-2.4.05/ezminc/minc_1_simple.h:217:20: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - 217 | str*=rw.ndim(i); - | ^ -/build/libminc-2.4.05/ezminc/minc_1_simple.h: In instantiation of 'void minc::save_standard_volume(minc_1_writer&, const T*) [with T = float]': -/build/libminc-2.4.05/ezminc/minc_1_simple_rw.h:87:27: required from 'void minc::save_simple_volume(minc_1_writer&, const simple_volume&) [with T = float]' -/build/libminc-2.4.05/ezminc/examples/trilinear_resample.cpp:119:30: required from here -/build/libminc-2.4.05/ezminc/minc_1_simple.h:238:23: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - 238 | if(rw.map_space(i)<0) continue; - | ^ -/build/libminc-2.4.05/ezminc/minc_1_simple.h:239:28: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - 239 | strides[rw.map_space(i)]=str; - | ^ -/build/libminc-2.4.05/ezminc/minc_1_simple.h:240:20: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - 240 | str*=rw.ndim(i); - | ^ -/build/libminc-2.4.05/ezminc/minc_1_simple.h: In instantiation of 'void minc::save_standard_volume(minc_1_writer&, const T*) [with T = double]': -/build/libminc-2.4.05/ezminc/minc_1_simple_rw.h:107:35: required from 'void minc::save_simple_volume(minc_1_writer&, const simple_volume&) [with T = float]' -/build/libminc-2.4.05/ezminc/examples/trilinear_resample.cpp:119:30: required from here -/build/libminc-2.4.05/ezminc/minc_1_simple.h:238:23: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - 238 | if(rw.map_space(i)<0) continue; - | ^ -/build/libminc-2.4.05/ezminc/minc_1_simple.h:239:28: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - 239 | strides[rw.map_space(i)]=str; - | ^ -/build/libminc-2.4.05/ezminc/minc_1_simple.h:240:20: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - 240 | str*=rw.ndim(i); - | ^ +In file included from /build/libminc-2.4.05/ezminc/tests/minc_rw_test2.cpp:3: +/build/libminc-2.4.05/ezminc/minc_1_simple.h: In instantiation of 'void minc::load_non_standard_volume(minc_1_reader&, T*) [with T = float]': +/build/libminc-2.4.05/ezminc/tests/minc_rw_test2.cpp:21:36: required from here +/build/libminc-2.4.05/ezminc/minc_1_simple.h:262:33: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + 262 | if(rw.map_space(dimorder[i])<0|| !rw.ndim(dimorder[i]) ) continue; + | ~~~~~~~~~~^ +/build/libminc-2.4.05/ezminc/minc_1_simple.h:262:59: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + 262 | if(rw.map_space(dimorder[i])<0|| !rw.ndim(dimorder[i]) ) continue; + | ~~~~~~~~~~^ +/build/libminc-2.4.05/ezminc/minc_1_simple.h:263:38: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + 263 | strides[rw.map_space(dimorder[i])]=str; + | ~~~~~~~~~~^ +/build/libminc-2.4.05/ezminc/minc_1_simple.h:264:30: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + 264 | str*=rw.ndim(dimorder[i]); + | ~~~~~~~~~~^ +/build/libminc-2.4.05/ezminc/minc_io_simple_volume.h: In instantiation of 'size_t minc::simple_volume::dim(size_t) const [with T = float; size_t = long unsigned int]': +/build/libminc-2.4.05/ezminc/tests/minc_rw_test2.cpp:23:29: required from here +/build/libminc-2.4.05/ezminc/minc_io_simple_volume.h:366:22: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + 366 | return _size[i]; + | ^ +/build/libminc-2.4.05/ezminc/minc_1_simple.h: In instantiation of 'void minc::save_non_standard_volume(minc_1_writer&, const T*) [with T = float]': +/build/libminc-2.4.05/ezminc/tests/minc_rw_test2.cpp:32:36: required from here +/build/libminc-2.4.05/ezminc/minc_1_simple.h:286:33: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + 286 | if(rw.map_space(dimorder[i])<0 || !rw.ndim(dimorder[i]) ) continue; + | ~~~~~~~~~~^ +/build/libminc-2.4.05/ezminc/minc_1_simple.h:286:60: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + 286 | if(rw.map_space(dimorder[i])<0 || !rw.ndim(dimorder[i]) ) continue; + | ~~~~~~~~~~^ +/build/libminc-2.4.05/ezminc/minc_1_simple.h:287:38: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + 287 | strides[rw.map_space(dimorder[i])]=str; + | ~~~~~~~~~~^ +/build/libminc-2.4.05/ezminc/minc_1_simple.h:288:30: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + 288 | str*=rw.ndim(dimorder[i]); + | ~~~~~~~~~~^ +In file included from /build/libminc-2.4.05/ezminc/tests/ezminc_rw_test.cpp:7: +/build/libminc-2.4.05/ezminc/minc_1_rw.h: In member function 'bool minc::minc_1_base::next_slice()': +/build/libminc-2.4.05/ezminc/minc_1_rw.h:147:41: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + 147 | for(int i=_ndims-_slice_dimensions-1;i>=0;i--) + | ~~~~~~~~~~~~~~~~~~~~~~~~^~ +/build/libminc-2.4.05/ezminc/minc_1_rw.h: In member function 'int minc::minc_1_base::slice_dimensions() const': +/build/libminc-2.4.05/ezminc/minc_1_rw.h:189:14: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + 189 | return _slice_dimensions; + | ^~~~~~~~~~~~~~~~~ +/build/libminc-2.4.05/ezminc/minc_1_rw.h: In member function 'int minc::minc_1_base::ndim(int) const': +/build/libminc-2.4.05/ezminc/minc_1_rw.h:203:32: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + 203 | if(j>=0) return _info[j].length; In file included from /build/libminc-2.4.05/ezminc/minc_1_simple_rw.h:19, from /build/libminc-2.4.05/ezminc/examples/create_grid_file.cpp:11: /build/libminc-2.4.05/ezminc/minc_io_simple_volume.h: In instantiation of 'minc::simple_volume::vect minc::simple_volume::voxel_to_world(const idx&) const [with T = minc::fixed_vec<3, float>; vect = minc::fixed_vec<3, double>; idx = minc::fixed_vec<3, long unsigned int>]': @@ -4906,8 +4902,7 @@ | ^ /build/libminc-2.4.05/ezminc/minc_io_simple_volume.h: In instantiation of 'void minc::simple_volume::_allocate(T*) [with T = float]': /build/libminc-2.4.05/ezminc/minc_io_simple_volume.h:207:9: required from 'void minc::simple_volume::resize(size_t, size_t, size_t) [with T = float; size_t = long unsigned int]' -/build/libminc-2.4.05/ezminc/minc_1_simple_rw.h:31:15: required from 'void minc::load_simple_volume(minc_1_reader&, simple_volume&) [with T = float]' -/build/libminc-2.4.05/ezminc/examples/trilinear_resample.cpp:81:30: required from here +/build/libminc-2.4.05/ezminc/tests/minc_rw_test2.cpp:20:15: required from here /build/libminc-2.4.05/ezminc/minc_io_simple_volume.h:53:19: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 53 | _stride[i]=_size[i-1]*_stride[i-1]; | ^ @@ -4921,17 +4916,38 @@ 54 | total*=_size[i]; | ^ /build/libminc-2.4.05/ezminc/minc_1_simple.h: In instantiation of 'bool minc::minc_input_iterator::next() [with T = float]': -/build/libminc-2.4.05/ezminc/minc_1_simple.h:221:38: required from 'void minc::load_standard_volume(minc_1_reader&, T*) [with T = float]' -/build/libminc-2.4.05/ezminc/minc_1_simple_rw.h:36:27: required from 'void minc::load_simple_volume(minc_1_reader&, simple_volume&) [with T = float]' -/build/libminc-2.4.05/ezminc/examples/trilinear_resample.cpp:81:30: required from here +/build/libminc-2.4.05/ezminc/minc_1_simple.h:268:38: required from 'void minc::load_non_standard_volume(minc_1_reader&, T*) [with T = float]' +/build/libminc-2.4.05/ezminc/tests/minc_rw_test2.cpp:21:36: required from here /build/libminc-2.4.05/ezminc/minc_1_simple.h:66:47: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'unsigned int' may change value [-Wconversion] 66 | if(_cur[i](_rw->dim(i).length)) | ^ -/build/libminc-2.4.05/ezminc/minc_1_simple.h: In instantiation of 'bool minc::minc_input_iterator::next() [with T = double]': -/build/libminc-2.4.05/ezminc/minc_1_simple.h:221:38: required from 'void minc::load_standard_volume(minc_1_reader&, T*) [with T = double]' -/build/libminc-2.4.05/ezminc/minc_1_simple_rw.h:56:35: required from 'void minc::load_simple_volume(minc_1_reader&, simple_volume&) [with T = float]' -/build/libminc-2.4.05/ezminc/examples/trilinear_resample.cpp:81:30: required from here -/build/libminc-2.4.05/ezminc/minc_1_simple.h:66:47: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'unsigned int' may change value [-Wconversion] +/build/libminc-2.4.05/ezminc/examples/trilinear_resample.cpp: In function 'int main(int, char**)': +/build/libminc-2.4.05/ezminc/examples/trilinear_resample.cpp:90:48: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] + 90 | old_step[i-1]=new_info[rdr.map_space(i)].step; +/build/libminc-2.4.05/ezminc/examples/trilinear_resample.cpp:91:49: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] + 91 | old_start[i-1]=new_info[rdr.map_space(i)].start; +/build/libminc-2.4.05/ezminc/examples/trilinear_resample.cpp:93:45: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'float' may change value [-Wconversion] + 93 | float len=(new_info[rdr.map_space(i)].length)*old_step[i-1]; + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~ +/build/libminc-2.4.05/ezminc/examples/trilinear_resample.cpp:98:49: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] + 98 | new_start[i-1]=new_info[rdr.map_space(i)].start; +/build/libminc-2.4.05/ezminc/examples/trilinear_resample.cpp:100:58: warning: conversion from 'double' to 'size_t' {aka 'long unsigned int'} may change value [-Wfloat-conversion] + 100 | new_len[i-1]=new_info[rdr.map_space(i)].length=ceil(fabs(len/_step)); + | ~~~~^~~~~~~~~~~~~~~~~ +/build/libminc-2.4.05/ezminc/examples/trilinear_resample.cpp:100:53: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + 100 | new_len[i-1]=new_info[rdr.map_space(i)].length=ceil(fabs(len/_step)); +/build/libminc-2.4.05/ezminc/examples/trilinear_resample.cpp:109:51: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] + 109 | minc::fixed_vec<3,float> cc=IDX(x*_step,y*_step,z*_step); + | ~^~~~~~ +/build/libminc-2.4.05/ezminc/examples/trilinear_resample.cpp:109:59: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] + 109 | minc::fixed_vec<3,float> cc=IDX(x*_step,y*_step,z*_step); + | ~^~~~~~ +/build/libminc-2.4.05/ezminc/examples/trilinear_resample.cpp:109:67: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] + 109 | minc::fixed_vec<3,float> cc=IDX(x*_step,y*_step,z*_step); + | ~^~~~~~ +/build/libminc-2.4.05/ezminc/examples/trilinear_resample.cpp:115:53: warning: conversion from 'double' to 'float' may change value [-Wfloat-conversion] + 115 | output_vol.set(x,y,z,input_vol.interpolate(cc[0],cc[1],cc[2])); + | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /build/libminc-2.4.05/ezminc/minc_io_simple_volume.h: In instantiation of 'void minc::simple_volume::_allocate(T*) [with T = minc::fixed_vec<3, float>]': /build/libminc-2.4.05/ezminc/minc_io_simple_volume.h:160:9: required from 'minc::simple_volume::simple_volume(size_t, size_t, size_t) [with T = minc::fixed_vec<3, float>; size_t = long unsigned int]' /build/libminc-2.4.05/ezminc/examples/create_grid_file.cpp:103:45: required from here @@ -4959,18 +4975,10 @@ /build/libminc-2.4.05/ezminc/minc_1_simple.h:240:20: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 240 | str*=rw.ndim(i); | ^ -In file included from /build/libminc-2.4.05/ezminc/tests/ezminc_rw_test.cpp:7: -/build/libminc-2.4.05/ezminc/minc_1_rw.h: In member function 'bool minc::minc_1_base::next_slice()': -/build/libminc-2.4.05/ezminc/minc_1_rw.h:147:41: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - 147 | for(int i=_ndims-_slice_dimensions-1;i>=0;i--) - | ~~~~~~~~~~~~~~~~~~~~~~~~^~ -/build/libminc-2.4.05/ezminc/minc_1_rw.h: In member function 'int minc::minc_1_base::slice_dimensions() const': -/build/libminc-2.4.05/ezminc/minc_1_rw.h:189:14: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - 189 | return _slice_dimensions; - | ^~~~~~~~~~~~~~~~~ -/build/libminc-2.4.05/ezminc/minc_1_rw.h: In member function 'int minc::minc_1_base::ndim(int) const': -/build/libminc-2.4.05/ezminc/minc_1_rw.h:203:32: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - 203 | if(j>=0) return _info[j].length; +/build/libminc-2.4.05/ezminc/examples/volume_avg.cpp: In function 'int main(int, char**)': +/build/libminc-2.4.05/ezminc/examples/volume_avg.cpp:128:47: warning: conversion from 'int' to 'float' may change value [-Wconversion] + 128 | _sd.c_buf()[i]=sqrt(_sd.c_buf()[i]/(argc-1) - _avg.c_buf()[i]*_avg.c_buf()[i] ); + | ~~~~~^~~ /build/libminc-2.4.05/ezminc/minc_1_simple.h: In instantiation of 'void minc::save_standard_volume(minc_1_writer&, const T*) [with T = float]': /build/libminc-2.4.05/ezminc/minc_1_simple_rw.h:97:34: required from 'void minc::save_simple_volume(minc_1_writer&, const simple_volume&) [with T = fixed_vec<3, float>]' /build/libminc-2.4.05/ezminc/examples/create_grid_file.cpp:124:23: required from here @@ -4983,10 +4991,6 @@ /build/libminc-2.4.05/ezminc/minc_1_simple.h:240:20: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 240 | str*=rw.ndim(i); | ^ -/build/libminc-2.4.05/ezminc/tests/minc_rw_test2.cpp: In function 'int main(int, char**)': -/build/libminc-2.4.05/ezminc/tests/minc_rw_test2.cpp:27:25: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'float' may change value [-Wconversion] - 27 | vol(x,y,z)=x+y+z; - | ~~~^~ /build/libminc-2.4.05/ezminc/minc_1_simple.h: In instantiation of 'void minc::save_standard_volume(minc_1_writer&, const T*) [with T = double]': /build/libminc-2.4.05/ezminc/minc_1_simple_rw.h:107:35: required from 'void minc::save_simple_volume(minc_1_writer&, const simple_volume&) [with T = fixed_vec<3, float>]' /build/libminc-2.4.05/ezminc/examples/create_grid_file.cpp:124:23: required from here @@ -4999,59 +5003,6 @@ /build/libminc-2.4.05/ezminc/minc_1_simple.h:240:20: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 240 | str*=rw.ndim(i); | ^ -/build/libminc-2.4.05/ezminc/examples/volume_avg.cpp: In function 'int main(int, char**)': -/build/libminc-2.4.05/ezminc/examples/volume_avg.cpp:128:47: warning: conversion from 'int' to 'float' may change value [-Wconversion] - 128 | _sd.c_buf()[i]=sqrt(_sd.c_buf()[i]/(argc-1) - _avg.c_buf()[i]*_avg.c_buf()[i] ); - | ~~~~~^~~ -In file included from /build/libminc-2.4.05/ezminc/tests/minc_rw_test2.cpp:4: -/build/libminc-2.4.05/ezminc/minc_io_simple_volume.h: In instantiation of 'minc::simple_volume::simple_volume() [with T = float]': -/build/libminc-2.4.05/ezminc/tests/minc_rw_test2.cpp:19:26: required from here -/build/libminc-2.4.05/ezminc/minc_io_simple_volume.h:185:17: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - 185 | _size[i]=0; - | ^ -/build/libminc-2.4.05/ezminc/minc_io_simple_volume.h:186:17: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - 186 | _step[i]=0.0; - | ^ -/build/libminc-2.4.05/ezminc/minc_io_simple_volume.h:187:18: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - 187 | _start[i]=0.0; - | ^ -/build/libminc-2.4.05/ezminc/minc_io_simple_volume.h:190:33: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - 190 | _direction_cosines[i][i]=1.0; - | ^ -In file included from /build/libminc-2.4.05/ezminc/tests/minc_rw_test2.cpp:3: -/build/libminc-2.4.05/ezminc/minc_1_simple.h: In instantiation of 'void minc::load_non_standard_volume(minc_1_reader&, T*) [with T = float]': -/build/libminc-2.4.05/ezminc/tests/minc_rw_test2.cpp:21:36: required from here -/build/libminc-2.4.05/ezminc/minc_1_simple.h:262:33: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - 262 | if(rw.map_space(dimorder[i])<0|| !rw.ndim(dimorder[i]) ) continue; - | ~~~~~~~~~~^ -/build/libminc-2.4.05/ezminc/minc_1_simple.h:262:59: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - 262 | if(rw.map_space(dimorder[i])<0|| !rw.ndim(dimorder[i]) ) continue; - | ~~~~~~~~~~^ -/build/libminc-2.4.05/ezminc/minc_1_simple.h:263:38: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - 263 | strides[rw.map_space(dimorder[i])]=str; - | ~~~~~~~~~~^ -/build/libminc-2.4.05/ezminc/minc_1_simple.h:264:30: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - 264 | str*=rw.ndim(dimorder[i]); - | ~~~~~~~~~~^ -/build/libminc-2.4.05/ezminc/minc_io_simple_volume.h: In instantiation of 'size_t minc::simple_volume::dim(size_t) const [with T = float; size_t = long unsigned int]': -/build/libminc-2.4.05/ezminc/tests/minc_rw_test2.cpp:23:29: required from here -/build/libminc-2.4.05/ezminc/minc_io_simple_volume.h:366:22: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - 366 | return _size[i]; - | ^ -/build/libminc-2.4.05/ezminc/minc_1_simple.h: In instantiation of 'void minc::save_non_standard_volume(minc_1_writer&, const T*) [with T = float]': -/build/libminc-2.4.05/ezminc/tests/minc_rw_test2.cpp:32:36: required from here -/build/libminc-2.4.05/ezminc/minc_1_simple.h:286:33: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - 286 | if(rw.map_space(dimorder[i])<0 || !rw.ndim(dimorder[i]) ) continue; - | ~~~~~~~~~~^ -/build/libminc-2.4.05/ezminc/minc_1_simple.h:286:60: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - 286 | if(rw.map_space(dimorder[i])<0 || !rw.ndim(dimorder[i]) ) continue; - | ~~~~~~~~~~^ -/build/libminc-2.4.05/ezminc/minc_1_simple.h:287:38: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - 287 | strides[rw.map_space(dimorder[i])]=str; - | ~~~~~~~~~~^ -/build/libminc-2.4.05/ezminc/minc_1_simple.h:288:30: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - 288 | str*=rw.ndim(dimorder[i]); - | ~~~~~~~~~~^ /build/libminc-2.4.05/ezminc/tests/ezminc_rw_test.cpp: In instantiation of 'void make_rw_test(const char*, int, nc_type, bool, double) [with TPixel = unsigned char; nc_type = int]': /build/libminc-2.4.05/ezminc/tests/ezminc_rw_test.cpp:181:32: required from here /build/libminc-2.4.05/ezminc/tests/ezminc_rw_test.cpp:36:11: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] @@ -5079,16 +5030,10 @@ /build/libminc-2.4.05/ezminc/tests/ezminc_rw_test.cpp:36:11: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 36 | volume*=info[i].length; | ~~~~~~^~~~~~~~~~~~~~~~ -/build/libminc-2.4.05/ezminc/tests/ezminc_rw_test.cpp:44:52: warning: conversion from 'double' to '__gnu_cxx::__alloc_traits, float>::value_type' {aka 'float'} may change value [-Wfloat-conversion] - 44 | buffer[i]=static_cast(random())*100.0/RAND_MAX; - | ^ -/build/libminc-2.4.05/ezminc/tests/ezminc_rw_test.cpp:59:19: warning: conversion from 'int' to '__gnu_cxx::__alloc_traits, short int>::value_type' {aka 'short int'} may change value [-Wconversion] - 59 | short_attr[i]=i; - | ^ In file included from /build/libminc-2.4.05/ezminc/minc_1_simple_rw.h:19, - from /build/libminc-2.4.05/ezminc/examples/volume_avg.cpp:19: + from /build/libminc-2.4.05/ezminc/examples/trilinear_resample.cpp:18: /build/libminc-2.4.05/ezminc/minc_io_simple_volume.h: In instantiation of 'minc::simple_volume::simple_volume() [with T = float]': -/build/libminc-2.4.05/ezminc/examples/volume_avg.cpp:98:23: required from here +/build/libminc-2.4.05/ezminc/examples/trilinear_resample.cpp:80:26: required from here /build/libminc-2.4.05/ezminc/minc_io_simple_volume.h:185:17: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 185 | _size[i]=0; | ^ @@ -5101,6 +5046,32 @@ /build/libminc-2.4.05/ezminc/minc_io_simple_volume.h:190:33: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 190 | _direction_cosines[i][i]=1.0; | ^ +/build/libminc-2.4.05/ezminc/minc_io_simple_volume.h: In instantiation of 'double minc::simple_volume::interpolate(float, float, float) const [with T = float]': +/build/libminc-2.4.05/ezminc/examples/trilinear_resample.cpp:115:53: required from here +/build/libminc-2.4.05/ezminc/minc_io_simple_volume.h:327:23: warning: conversion from 'float' to 'size_t' {aka 'long unsigned int'} may change value [-Wfloat-conversion] + 327 | size_t x=floor(_x); + | ~~~~~^~~~ +/build/libminc-2.4.05/ezminc/minc_io_simple_volume.h:328:23: warning: conversion from 'float' to 'size_t' {aka 'long unsigned int'} may change value [-Wfloat-conversion] + 328 | size_t y=floor(_y); + | ~~~~~^~~~ +/build/libminc-2.4.05/ezminc/minc_io_simple_volume.h:329:23: warning: conversion from 'float' to 'size_t' {aka 'long unsigned int'} may change value [-Wfloat-conversion] + 329 | size_t z=floor(_z); + | ~~~~~^~~~ +/build/libminc-2.4.05/ezminc/minc_io_simple_volume.h:331:21: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'float' may change value [-Wconversion] + 331 | float dx=_x-x; + | ^ +/build/libminc-2.4.05/ezminc/tests/ezminc_rw_test.cpp:44:52: warning: conversion from 'double' to '__gnu_cxx::__alloc_traits, float>::value_type' {aka 'float'} may change value [-Wfloat-conversion] + 44 | buffer[i]=static_cast(random())*100.0/RAND_MAX; + | ^ +/build/libminc-2.4.05/ezminc/minc_io_simple_volume.h:332:21: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'float' may change value [-Wconversion] + 332 | float dy=_y-y; + | ^ +/build/libminc-2.4.05/ezminc/minc_io_simple_volume.h:333:21: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'float' may change value [-Wconversion] + 333 | float dz=_z-z; + | ^ +/build/libminc-2.4.05/ezminc/tests/ezminc_rw_test.cpp:59:19: warning: conversion from 'int' to '__gnu_cxx::__alloc_traits, short int>::value_type' {aka 'short int'} may change value [-Wconversion] + 59 | short_attr[i]=i; + | ^ /build/libminc-2.4.05/ezminc/tests/ezminc_rw_test.cpp: In instantiation of 'void make_rw_test(const char*, int, nc_type, bool, double) [with TPixel = double; nc_type = int]': /build/libminc-2.4.05/ezminc/tests/ezminc_rw_test.cpp:190:25: required from here /build/libminc-2.4.05/ezminc/tests/ezminc_rw_test.cpp:36:11: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] @@ -5109,6 +5080,22 @@ /build/libminc-2.4.05/ezminc/tests/ezminc_rw_test.cpp:59:19: warning: conversion from 'int' to '__gnu_cxx::__alloc_traits, short int>::value_type' {aka 'short int'} may change value [-Wconversion] 59 | short_attr[i]=i; | ^ +In file included from /build/libminc-2.4.05/ezminc/minc_1_simple_rw.h:19, + from /build/libminc-2.4.05/ezminc/examples/volume_avg.cpp:19: +/build/libminc-2.4.05/ezminc/minc_io_simple_volume.h: In instantiation of 'minc::simple_volume::simple_volume() [with T = float]': +/build/libminc-2.4.05/ezminc/examples/volume_avg.cpp:98:23: required from here +/build/libminc-2.4.05/ezminc/minc_io_simple_volume.h:185:17: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + 185 | _size[i]=0; + | ^ +/build/libminc-2.4.05/ezminc/minc_io_simple_volume.h:186:17: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + 186 | _step[i]=0.0; + | ^ +/build/libminc-2.4.05/ezminc/minc_io_simple_volume.h:187:18: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + 187 | _start[i]=0.0; + | ^ +/build/libminc-2.4.05/ezminc/minc_io_simple_volume.h:190:33: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + 190 | _direction_cosines[i][i]=1.0; + | ^ /build/libminc-2.4.05/ezminc/minc_io_simple_volume.h: In instantiation of 'minc::simple_volume::simple_volume(const minc::simple_volume&, bool) [with T = float]': /build/libminc-2.4.05/ezminc/examples/volume_avg.cpp:102:31: required from here /build/libminc-2.4.05/ezminc/minc_io_simple_volume.h:143:17: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] @@ -5133,27 +5120,31 @@ /build/libminc-2.4.05/ezminc/minc_io_simple_volume.h:475:32: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 475 | if(_size[i]!=a._size[i]) | ^ -/build/libminc-2.4.05/ezminc/minc_io_simple_volume.h: In instantiation of 'void minc::simple_volume::_allocate(T*) [with T = float]': -/build/libminc-2.4.05/ezminc/minc_io_simple_volume.h:207:9: required from 'void minc::simple_volume::resize(size_t, size_t, size_t) [with T = float; size_t = long unsigned int]' -/build/libminc-2.4.05/ezminc/tests/minc_rw_test2.cpp:20:15: required from here -/build/libminc-2.4.05/ezminc/minc_io_simple_volume.h:53:19: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - 53 | _stride[i]=_size[i-1]*_stride[i-1]; - | ^ -/build/libminc-2.4.05/ezminc/minc_io_simple_volume.h:53:29: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - 53 | _stride[i]=_size[i-1]*_stride[i-1]; - | ~^~ -/build/libminc-2.4.05/ezminc/minc_io_simple_volume.h:53:42: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - 53 | _stride[i]=_size[i-1]*_stride[i-1]; - | ~^~ -/build/libminc-2.4.05/ezminc/minc_io_simple_volume.h:54:24: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - 54 | total*=_size[i]; - | ^ -/build/libminc-2.4.05/ezminc/minc_1_simple.h: In instantiation of 'bool minc::minc_input_iterator::next() [with T = float]': -/build/libminc-2.4.05/ezminc/minc_1_simple.h:268:38: required from 'void minc::load_non_standard_volume(minc_1_reader&, T*) [with T = float]' -/build/libminc-2.4.05/ezminc/tests/minc_rw_test2.cpp:21:36: required from here -/build/libminc-2.4.05/ezminc/minc_1_simple.h:66:47: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'unsigned int' may change value [-Wconversion] - 66 | if(_cur[i](_rw->dim(i).length)) - | ^ +In file included from /build/libminc-2.4.05/ezminc/examples/trilinear_resample.cpp:17: +/build/libminc-2.4.05/ezminc/minc_1_simple.h: In instantiation of 'void minc::load_standard_volume(minc_1_reader&, T*) [with T = float]': +/build/libminc-2.4.05/ezminc/minc_1_simple_rw.h:36:27: required from 'void minc::load_simple_volume(minc_1_reader&, simple_volume&) [with T = float]' +/build/libminc-2.4.05/ezminc/examples/trilinear_resample.cpp:81:30: required from here +/build/libminc-2.4.05/ezminc/minc_1_simple.h:215:23: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + 215 | if(rw.map_space(i)<0) continue; + | ^ +/build/libminc-2.4.05/ezminc/minc_1_simple.h:216:28: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + 216 | strides[rw.map_space(i)]=str; + | ^ +/build/libminc-2.4.05/ezminc/minc_1_simple.h:217:20: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + 217 | str*=rw.ndim(i); + | ^ +/build/libminc-2.4.05/ezminc/minc_1_simple.h: In instantiation of 'void minc::load_standard_volume(minc_1_reader&, T*) [with T = double]': +/build/libminc-2.4.05/ezminc/minc_1_simple_rw.h:56:35: required from 'void minc::load_simple_volume(minc_1_reader&, simple_volume&) [with T = float]' +/build/libminc-2.4.05/ezminc/examples/trilinear_resample.cpp:81:30: required from here +/build/libminc-2.4.05/ezminc/minc_1_simple.h:215:23: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + 215 | if(rw.map_space(i)<0) continue; + | ^ +/build/libminc-2.4.05/ezminc/minc_1_simple.h:216:28: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + 216 | strides[rw.map_space(i)]=str; + | ^ +/build/libminc-2.4.05/ezminc/minc_1_simple.h:217:20: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + 217 | str*=rw.ndim(i); + | ^ In file included from /build/libminc-2.4.05/ezminc/examples/volume_avg.cpp:18: /build/libminc-2.4.05/ezminc/minc_1_simple.h: In instantiation of 'void minc::load_standard_volume(minc_1_reader&, T*) [with T = float]': /build/libminc-2.4.05/ezminc/minc_1_simple_rw.h:36:27: required from 'void minc::load_simple_volume(minc_1_reader&, simple_volume&) [with T = float]' @@ -5167,6 +5158,18 @@ /build/libminc-2.4.05/ezminc/minc_1_simple.h:217:20: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 217 | str*=rw.ndim(i); | ^ +/build/libminc-2.4.05/ezminc/minc_1_simple.h: In instantiation of 'void minc::save_standard_volume(minc_1_writer&, const T*) [with T = float]': +/build/libminc-2.4.05/ezminc/minc_1_simple_rw.h:87:27: required from 'void minc::save_simple_volume(minc_1_writer&, const simple_volume&) [with T = float]' +/build/libminc-2.4.05/ezminc/examples/trilinear_resample.cpp:119:30: required from here +/build/libminc-2.4.05/ezminc/minc_1_simple.h:238:23: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + 238 | if(rw.map_space(i)<0) continue; + | ^ +/build/libminc-2.4.05/ezminc/minc_1_simple.h:239:28: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + 239 | strides[rw.map_space(i)]=str; + | ^ +/build/libminc-2.4.05/ezminc/minc_1_simple.h:240:20: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + 240 | str*=rw.ndim(i); + | ^ In file included from /build/libminc-2.4.05/ezminc/tests/ezminc_rw_test.cpp:8: /build/libminc-2.4.05/ezminc/minc_1_simple.h: In instantiation of 'void minc::save_standard_volume(minc_1_writer&, const T*) [with T = unsigned char]': /build/libminc-2.4.05/ezminc/tests/ezminc_rw_test.cpp:87:23: required from 'void make_rw_test(const char*, int, nc_type, bool, double) [with TPixel = unsigned char; nc_type = int]' @@ -5180,6 +5183,18 @@ /build/libminc-2.4.05/ezminc/minc_1_simple.h:240:20: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 240 | str*=rw.ndim(i); | ^ +/build/libminc-2.4.05/ezminc/minc_1_simple.h: In instantiation of 'void minc::save_standard_volume(minc_1_writer&, const T*) [with T = double]': +/build/libminc-2.4.05/ezminc/minc_1_simple_rw.h:107:35: required from 'void minc::save_simple_volume(minc_1_writer&, const simple_volume&) [with T = float]' +/build/libminc-2.4.05/ezminc/examples/trilinear_resample.cpp:119:30: required from here +/build/libminc-2.4.05/ezminc/minc_1_simple.h:238:23: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + 238 | if(rw.map_space(i)<0) continue; + | ^ +/build/libminc-2.4.05/ezminc/minc_1_simple.h:239:28: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + 239 | strides[rw.map_space(i)]=str; + | ^ +/build/libminc-2.4.05/ezminc/minc_1_simple.h:240:20: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + 240 | str*=rw.ndim(i); + | ^ /build/libminc-2.4.05/ezminc/minc_1_simple.h: In instantiation of 'void minc::load_standard_volume(minc_1_reader&, T*) [with T = unsigned char]': /build/libminc-2.4.05/ezminc/tests/ezminc_rw_test.cpp:151:23: required from 'void make_rw_test(const char*, int, nc_type, bool, double) [with TPixel = unsigned char; nc_type = int]' /build/libminc-2.4.05/ezminc/tests/ezminc_rw_test.cpp:181:32: required from here @@ -5192,29 +5207,41 @@ /build/libminc-2.4.05/ezminc/minc_1_simple.h:217:20: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 217 | str*=rw.ndim(i); | ^ +/build/libminc-2.4.05/ezminc/minc_1_simple.h: In instantiation of 'void minc::save_standard_volume(minc_1_writer&, const T*) [with T = int]': +/build/libminc-2.4.05/ezminc/tests/ezminc_rw_test.cpp:87:23: required from 'void make_rw_test(const char*, int, nc_type, bool, double) [with TPixel = int; nc_type = int]' +/build/libminc-2.4.05/ezminc/tests/ezminc_rw_test.cpp:184:22: required from here +/build/libminc-2.4.05/ezminc/minc_1_simple.h:238:23: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + 238 | if(rw.map_space(i)<0) continue; + | ^ +/build/libminc-2.4.05/ezminc/minc_1_simple.h:239:28: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + 239 | strides[rw.map_space(i)]=str; + | ^ +/build/libminc-2.4.05/ezminc/minc_1_simple.h:240:20: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + 240 | str*=rw.ndim(i); + | ^ /build/libminc-2.4.05/ezminc/minc_1_simple.h: In instantiation of 'void minc::load_standard_volume(minc_1_reader&, T*) [with T = double]': /build/libminc-2.4.05/ezminc/minc_1_simple_rw.h:56:35: required from 'void minc::load_simple_volume(minc_1_reader&, simple_volume&) [with T = float]' /build/libminc-2.4.05/ezminc/examples/volume_avg.cpp:100:30: required from here /build/libminc-2.4.05/ezminc/minc_1_simple.h:215:23: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 215 | if(rw.map_space(i)<0) continue; | ^ +/build/libminc-2.4.05/ezminc/minc_1_simple.h: In instantiation of 'void minc::load_standard_volume(minc_1_reader&, T*) [with T = int]': +/build/libminc-2.4.05/ezminc/tests/ezminc_rw_test.cpp:151:23: required from 'void make_rw_test(const char*, int, nc_type, bool, double) [with TPixel = int; nc_type = int]' +/build/libminc-2.4.05/ezminc/tests/ezminc_rw_test.cpp:184:22: required from here +/build/libminc-2.4.05/ezminc/minc_1_simple.h:215:23: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + 215 | if(rw.map_space(i)<0) continue; + | ^ +/build/libminc-2.4.05/ezminc/minc_1_simple.h:216:28: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + 216 | strides[rw.map_space(i)]=str; + | ^ /build/libminc-2.4.05/ezminc/minc_1_simple.h:216:28: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 216 | strides[rw.map_space(i)]=str; | ^ /build/libminc-2.4.05/ezminc/minc_1_simple.h:217:20: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 217 | str*=rw.ndim(i); | ^ -/build/libminc-2.4.05/ezminc/minc_1_simple.h: In instantiation of 'void minc::save_standard_volume(minc_1_writer&, const T*) [with T = int]': -/build/libminc-2.4.05/ezminc/tests/ezminc_rw_test.cpp:87:23: required from 'void make_rw_test(const char*, int, nc_type, bool, double) [with TPixel = int; nc_type = int]' -/build/libminc-2.4.05/ezminc/tests/ezminc_rw_test.cpp:184:22: required from here -/build/libminc-2.4.05/ezminc/minc_1_simple.h:238:23: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - 238 | if(rw.map_space(i)<0) continue; - | ^ -/build/libminc-2.4.05/ezminc/minc_1_simple.h:239:28: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - 239 | strides[rw.map_space(i)]=str; - | ^ -/build/libminc-2.4.05/ezminc/minc_1_simple.h:240:20: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - 240 | str*=rw.ndim(i); +/build/libminc-2.4.05/ezminc/minc_1_simple.h:217:20: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + 217 | str*=rw.ndim(i); | ^ /build/libminc-2.4.05/ezminc/minc_io_simple_volume.h: In instantiation of 'void minc::simple_volume::_allocate(T*) [with T = float]': /build/libminc-2.4.05/ezminc/minc_io_simple_volume.h:144:9: required from 'minc::simple_volume::simple_volume(const minc::simple_volume&, bool) [with T = float]' @@ -5231,33 +5258,9 @@ /build/libminc-2.4.05/ezminc/minc_io_simple_volume.h:54:24: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 54 | total*=_size[i]; | ^ -/build/libminc-2.4.05/ezminc/minc_1_simple.h: In instantiation of 'void minc::load_standard_volume(minc_1_reader&, T*) [with T = int]': -/build/libminc-2.4.05/ezminc/tests/ezminc_rw_test.cpp:151:23: required from 'void make_rw_test(const char*, int, nc_type, bool, double) [with TPixel = int; nc_type = int]' -/build/libminc-2.4.05/ezminc/tests/ezminc_rw_test.cpp:184:22: required from here -/build/libminc-2.4.05/ezminc/minc_1_simple.h:215:23: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - 215 | if(rw.map_space(i)<0) continue; - | ^ -/build/libminc-2.4.05/ezminc/minc_1_simple.h:216:28: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - 216 | strides[rw.map_space(i)]=str; - | ^ /build/libminc-2.4.05/ezminc/minc_1_simple.h: In instantiation of 'void minc::save_standard_volume(minc_1_writer&, const T*) [with T = float]': -/build/libminc-2.4.05/ezminc/minc_1_simple_rw.h:87:27: required from 'void minc::save_simple_volume(minc_1_writer&, const simple_volume&) [with T = float]' -/build/libminc-2.4.05/ezminc/examples/volume_avg.cpp:132:30: required from here -/build/libminc-2.4.05/ezminc/minc_1_simple.h:238:23: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - 238 | if(rw.map_space(i)<0) continue; - | ^ -/build/libminc-2.4.05/ezminc/minc_1_simple.h:217:20: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - 217 | str*=rw.ndim(i); - | ^ -/build/libminc-2.4.05/ezminc/minc_1_simple.h:239:28: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - 239 | strides[rw.map_space(i)]=str; - | ^ -/build/libminc-2.4.05/ezminc/minc_1_simple.h:240:20: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] - 240 | str*=rw.ndim(i); - | ^ -/build/libminc-2.4.05/ezminc/minc_1_simple.h: In instantiation of 'void minc::save_standard_volume(minc_1_writer&, const T*) [with T = double]': -/build/libminc-2.4.05/ezminc/minc_1_simple_rw.h:107:35: required from 'void minc::save_simple_volume(minc_1_writer&, const simple_volume&) [with T = float]' -/build/libminc-2.4.05/ezminc/examples/volume_avg.cpp:132:30: required from here +/build/libminc-2.4.05/ezminc/tests/ezminc_rw_test.cpp:87:23: required from 'void make_rw_test(const char*, int, nc_type, bool, double) [with TPixel = float; nc_type = int]' +/build/libminc-2.4.05/ezminc/tests/ezminc_rw_test.cpp:187:24: required from here /build/libminc-2.4.05/ezminc/minc_1_simple.h:238:23: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 238 | if(rw.map_space(i)<0) continue; | ^ @@ -5268,8 +5271,8 @@ 240 | str*=rw.ndim(i); | ^ /build/libminc-2.4.05/ezminc/minc_1_simple.h: In instantiation of 'void minc::save_standard_volume(minc_1_writer&, const T*) [with T = float]': -/build/libminc-2.4.05/ezminc/tests/ezminc_rw_test.cpp:87:23: required from 'void make_rw_test(const char*, int, nc_type, bool, double) [with TPixel = float; nc_type = int]' -/build/libminc-2.4.05/ezminc/tests/ezminc_rw_test.cpp:187:24: required from here +/build/libminc-2.4.05/ezminc/minc_1_simple_rw.h:87:27: required from 'void minc::save_simple_volume(minc_1_writer&, const simple_volume&) [with T = float]' +/build/libminc-2.4.05/ezminc/examples/volume_avg.cpp:132:30: required from here /build/libminc-2.4.05/ezminc/minc_1_simple.h:238:23: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 238 | if(rw.map_space(i)<0) continue; | ^ @@ -5292,6 +5295,18 @@ 217 | str*=rw.ndim(i); | ^ /build/libminc-2.4.05/ezminc/minc_1_simple.h: In instantiation of 'void minc::save_standard_volume(minc_1_writer&, const T*) [with T = double]': +/build/libminc-2.4.05/ezminc/minc_1_simple_rw.h:107:35: required from 'void minc::save_simple_volume(minc_1_writer&, const simple_volume&) [with T = float]' +/build/libminc-2.4.05/ezminc/examples/volume_avg.cpp:132:30: required from here +/build/libminc-2.4.05/ezminc/minc_1_simple.h:238:23: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + 238 | if(rw.map_space(i)<0) continue; + | ^ +/build/libminc-2.4.05/ezminc/minc_1_simple.h:239:28: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + 239 | strides[rw.map_space(i)]=str; + | ^ +/build/libminc-2.4.05/ezminc/minc_1_simple.h:240:20: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + 240 | str*=rw.ndim(i); + | ^ +/build/libminc-2.4.05/ezminc/minc_1_simple.h: In instantiation of 'void minc::save_standard_volume(minc_1_writer&, const T*) [with T = double]': /build/libminc-2.4.05/ezminc/tests/ezminc_rw_test.cpp:87:23: required from 'void make_rw_test(const char*, int, nc_type, bool, double) [with TPixel = double; nc_type = int]' /build/libminc-2.4.05/ezminc/tests/ezminc_rw_test.cpp:190:25: required from here /build/libminc-2.4.05/ezminc/minc_1_simple.h:238:23: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] @@ -5315,6 +5330,34 @@ /build/libminc-2.4.05/ezminc/minc_1_simple.h:217:20: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] 217 | str*=rw.ndim(i); | ^ +/build/libminc-2.4.05/ezminc/minc_io_simple_volume.h: In instantiation of 'void minc::simple_volume::_allocate(T*) [with T = float]': +/build/libminc-2.4.05/ezminc/minc_io_simple_volume.h:207:9: required from 'void minc::simple_volume::resize(size_t, size_t, size_t) [with T = float; size_t = long unsigned int]' +/build/libminc-2.4.05/ezminc/minc_1_simple_rw.h:31:15: required from 'void minc::load_simple_volume(minc_1_reader&, simple_volume&) [with T = float]' +/build/libminc-2.4.05/ezminc/examples/trilinear_resample.cpp:81:30: required from here +/build/libminc-2.4.05/ezminc/minc_io_simple_volume.h:53:19: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + 53 | _stride[i]=_size[i-1]*_stride[i-1]; + | ^ +/build/libminc-2.4.05/ezminc/minc_io_simple_volume.h:53:29: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + 53 | _stride[i]=_size[i-1]*_stride[i-1]; + | ~^~ +/build/libminc-2.4.05/ezminc/minc_io_simple_volume.h:53:42: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + 53 | _stride[i]=_size[i-1]*_stride[i-1]; + | ~^~ +/build/libminc-2.4.05/ezminc/minc_io_simple_volume.h:54:24: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'int' may change value [-Wconversion] + 54 | total*=_size[i]; + | ^ +/build/libminc-2.4.05/ezminc/minc_1_simple.h: In instantiation of 'bool minc::minc_input_iterator::next() [with T = float]': +/build/libminc-2.4.05/ezminc/minc_1_simple.h:221:38: required from 'void minc::load_standard_volume(minc_1_reader&, T*) [with T = float]' +/build/libminc-2.4.05/ezminc/minc_1_simple_rw.h:36:27: required from 'void minc::load_simple_volume(minc_1_reader&, simple_volume&) [with T = float]' +/build/libminc-2.4.05/ezminc/examples/trilinear_resample.cpp:81:30: required from here +/build/libminc-2.4.05/ezminc/minc_1_simple.h:66:47: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'unsigned int' may change value [-Wconversion] + 66 | if(_cur[i](_rw->dim(i).length)) + | ^ +/build/libminc-2.4.05/ezminc/minc_1_simple.h: In instantiation of 'bool minc::minc_input_iterator::next() [with T = double]': +/build/libminc-2.4.05/ezminc/minc_1_simple.h:221:38: required from 'void minc::load_standard_volume(minc_1_reader&, T*) [with T = double]' +/build/libminc-2.4.05/ezminc/minc_1_simple_rw.h:56:35: required from 'void minc::load_simple_volume(minc_1_reader&, simple_volume&) [with T = float]' +/build/libminc-2.4.05/ezminc/examples/trilinear_resample.cpp:81:30: required from here +/build/libminc-2.4.05/ezminc/minc_1_simple.h:66:47: warning: conversion from 'size_t' {aka 'long unsigned int'} to 'unsigned int' may change value [-Wconversion] /build/libminc-2.4.05/ezminc/minc_1_simple.h: In instantiation of 'bool minc::minc_input_iterator::next() [with T = float]': /build/libminc-2.4.05/ezminc/minc_1_simple.h:221:38: required from 'void minc::load_standard_volume(minc_1_reader&, T*) [with T = float]' /build/libminc-2.4.05/ezminc/minc_1_simple_rw.h:36:27: required from 'void minc::load_simple_volume(minc_1_reader&, simple_volume&) [with T = float]' @@ -5352,28 +5395,28 @@ [ 98%] Linking CXX executable volume_msq_dist cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/ezminc/examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/volume_msq_dist.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/volume_msq_dist.dir/volume_msq_dist.cpp.o -o volume_msq_dist -Wl,-rpath,/build/libminc-2.4.05/obj-x86_64-linux-gnu/ezminc:/build/libminc-2.4.05/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc_io.so.5.3.0 ../../libminc2.so.5.3.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so +make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' +[ 98%] Built target volume_msq_dist [ 99%] Linking CXX executable ezminc_rw_test2 cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/ezminc/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/ezminc_rw_test2.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/ezminc_rw_test2.dir/minc_rw_test2.cpp.o -o ezminc_rw_test2 -Wl,-rpath,/build/libminc-2.4.05/obj-x86_64-linux-gnu/ezminc:/build/libminc-2.4.05/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc_io.so.5.3.0 ../../libminc2.so.5.3.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libz.so -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/lib/x86_64-linux-gnu/libdl.a -lm -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' -[ 99%] Built target volume_msq_dist +[ 99%] Built target ezminc_rw_test2 [ 99%] Linking CXX executable create_grid_file cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/ezminc/examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/create_grid_file.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/create_grid_file.dir/create_grid_file.cpp.o -o create_grid_file -Wl,-rpath,/build/libminc-2.4.05/obj-x86_64-linux-gnu/ezminc:/build/libminc-2.4.05/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc_io.so.5.3.0 ../../libminc2.so.5.3.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so -make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' -[ 99%] Built target ezminc_rw_test2 -[ 99%] Linking CXX executable trilinear_resample -cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/ezminc/examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/trilinear_resample.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/trilinear_resample.dir/trilinear_resample.cpp.o -o trilinear_resample -Wl,-rpath,/build/libminc-2.4.05/obj-x86_64-linux-gnu/ezminc:/build/libminc-2.4.05/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc_io.so.5.3.0 ../../libminc2.so.5.3.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so -make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' -[ 99%] Built target create_grid_file [100%] Linking CXX executable volume_avg cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/ezminc/examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/volume_avg.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/volume_avg.dir/volume_avg.cpp.o -o volume_avg -Wl,-rpath,/build/libminc-2.4.05/obj-x86_64-linux-gnu/ezminc:/build/libminc-2.4.05/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc_io.so.5.3.0 ../../libminc2.so.5.3.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' -[100%] Built target trilinear_resample +[100%] Built target create_grid_file +[100%] Linking CXX executable trilinear_resample +cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/ezminc/examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/trilinear_resample.dir/link.txt --verbose=1 +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/trilinear_resample.dir/trilinear_resample.cpp.o -o trilinear_resample -Wl,-rpath,/build/libminc-2.4.05/obj-x86_64-linux-gnu/ezminc:/build/libminc-2.4.05/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc_io.so.5.3.0 ../../libminc2.so.5.3.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' [100%] Built target volume_avg +make[3]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' +[100%] Built target trilinear_resample [100%] Linking CXX executable ezminc_rw_test cd /build/libminc-2.4.05/obj-x86_64-linux-gnu/ezminc/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/ezminc_rw_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/libminc-2.4.05=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wconversion -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/ezminc_rw_test.dir/ezminc_rw_test.cpp.o -o ezminc_rw_test -Wl,-rpath,/build/libminc-2.4.05/obj-x86_64-linux-gnu/ezminc:/build/libminc-2.4.05/obj-x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libminc_io.so.5.3.0 ../../libminc2.so.5.3.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libz.so -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so /usr/lib/x86_64-linux-gnu/libdl.a -lm -lm -ldl -lrt /usr/lib/x86_64-linux-gnu/libnetcdf.so @@ -5406,28 +5449,28 @@ 1: Test command: /build/libminc-2.4.05/obj-x86_64-linux-gnu/ezminc/tests/ezminc_rw_test "/build/libminc-2.4.05/obj-x86_64-linux-gnu/ezminc/tests" 1: Working Directory: /build/libminc-2.4.05/obj-x86_64-linux-gnu/ezminc/tests 1: Test timeout computed to be: 1500 - 1/53 Test #1: ezminc_rw_test ................... Passed 0.03 sec + 1/53 Test #1: ezminc_rw_test ................... Passed 0.04 sec test 2 Start 2: minc_types-1 2: Test command: /build/libminc-2.4.05/testdir/run_test_cmake.sh "/build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/minc_types" "/build/libminc-2.4.05/testdir/minc_types.out" 2: Working Directory: /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir 2: Test timeout computed to be: 1500 - 2/53 Test #2: minc_types-1 ..................... Passed 0.03 sec + 2/53 Test #2: minc_types-1 ..................... Passed 0.04 sec test 3 Start 3: minc_types-2 3: Test command: /build/libminc-2.4.05/testdir/run_test2_cmake.sh "/build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/minc_types" "/build/libminc-2.4.05/testdir/minc_types.out" 3: Working Directory: /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir 3: Test timeout computed to be: 1500 - 3/53 Test #3: minc_types-2 ..................... Passed 0.10 sec + 3/53 Test #3: minc_types-2 ..................... Passed 0.11 sec test 4 Start 4: icv_dim1-1 4: Test command: /build/libminc-2.4.05/testdir/run_test_cmake.sh "/build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/icv_dim1" "/build/libminc-2.4.05/testdir/icv_dim1.out" 4: Working Directory: /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir 4: Test timeout computed to be: 1500 - 4/53 Test #4: icv_dim1-1 ....................... Passed 0.02 sec + 4/53 Test #4: icv_dim1-1 ....................... Passed 0.03 sec test 5 Start 5: icv_dim1-2 @@ -5441,14 +5484,14 @@ 6: Test command: /build/libminc-2.4.05/testdir/run_test_cmake.sh "/build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/icv_dim" "/build/libminc-2.4.05/testdir/icv_dim.out" 6: Working Directory: /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir 6: Test timeout computed to be: 1500 - 6/53 Test #6: icv_dim-1 ........................ Passed 0.02 sec + 6/53 Test #6: icv_dim-1 ........................ Passed 0.03 sec test 7 Start 7: icv_dim-2 7: Test command: /build/libminc-2.4.05/testdir/run_test2_cmake.sh "/build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/icv_dim" "/build/libminc-2.4.05/testdir/icv_dim.out" 7: Working Directory: /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir 7: Test timeout computed to be: 1500 - 7/53 Test #7: icv_dim-2 ........................ Passed 0.02 sec + 7/53 Test #7: icv_dim-2 ........................ Passed 0.03 sec test 8 Start 8: icv_fillvalue-1 @@ -5462,7 +5505,7 @@ 9: Test command: /build/libminc-2.4.05/testdir/run_test2_cmake.sh "/build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/icv_fillvalue" "/build/libminc-2.4.05/testdir/icv_fillvalue.out" 9: Working Directory: /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir 9: Test timeout computed to be: 1500 - 9/53 Test #9: icv_fillvalue-2 .................. Passed 0.02 sec + 9/53 Test #9: icv_fillvalue-2 .................. Passed 0.03 sec test 10 Start 10: icv_range-1 @@ -5483,7 +5526,7 @@ 12: Test command: /build/libminc-2.4.05/testdir/run_test_arg_parse_cmake.sh "/build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/test_arg_parse" 12: Working Directory: /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir 12: Test timeout computed to be: 1500 -12/53 Test #12: arg_parse ........................ Passed 0.35 sec +12/53 Test #12: arg_parse ........................ Passed 0.45 sec test 13 Start 13: icv @@ -5515,7 +5558,7 @@ 14: Testing with voxel type=5 14: Testing with voxel type=6 14: Exiting with error count 0 -14/53 Test #14: icv_vec .......................... Passed 0.02 sec +14/53 Test #14: icv_vec .......................... Passed 0.03 sec test 15 Start 15: minc @@ -5530,7 +5573,7 @@ 16: Working Directory: /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir 16: Test timeout computed to be: 1500 16: Part 1... -16: ./libsrc/netcdf_convenience.c:619 (from micreate): Unable to create file '/tmp/minc-Pzhbhq' +16: ./libsrc/netcdf_convenience.c:619 (from micreate): Unable to create file '/tmp/minc-6lXbmz' 16: Part 2... 16: Part 3... 16: Part 4... @@ -5543,7 +5586,7 @@ 16: ./libsrc/netcdf_convenience.c:686 (from miclose): Error closing file 16: ./libsrc/image_conversion.c:449 (from miicv_setint): Error setting ICV property: MI_ICV_NUM_IMGDIMS out of range 16: **** Tests completed with no errors -16/53 Test #16: mincapi .......................... Passed 0.08 sec +16/53 Test #16: mincapi .......................... Passed 0.09 sec test 17 Start 17: test_mconv @@ -5558,7 +5601,7 @@ 18: Working Directory: /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir 18: Test timeout computed to be: 1500 18: Running test with attribute size=10000 -18/53 Test #18: minc_long_attr_10k ............... Passed 0.07 sec +18/53 Test #18: minc_long_attr_10k ............... Passed 0.08 sec test 19 Start 19: minc_long_attr_100k @@ -5566,7 +5609,7 @@ 19: Working Directory: /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir 19: Test timeout computed to be: 1500 19: Running test with attribute size=100000 -19/53 Test #19: minc_long_attr_100k .............. Passed 0.07 sec +19/53 Test #19: minc_long_attr_100k .............. Passed 0.09 sec test 20 Start 20: minc_long_attr_1m @@ -5574,7 +5617,7 @@ 20: Working Directory: /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir 20: Test timeout computed to be: 1500 20: Running test with attribute size=1000000 -20/53 Test #20: minc_long_attr_1m ................ Passed 0.08 sec +20/53 Test #20: minc_long_attr_1m ................ Passed 0.09 sec test 21 Start 21: minc_conversion @@ -5592,7 +5635,7 @@ 21: test3 21: Reading full volume 20x30x40 float ... 21: No errors detected! -21/53 Test #21: minc_conversion .................. Passed 0.08 sec +21/53 Test #21: minc_conversion .................. Passed 0.10 sec test 22 Start 22: volume_test-1 @@ -5602,7 +5645,7 @@ 22: set_multidim_n_dimensions: memory already allocated. 22: set_multidim_n_dimensions: memory already allocated. 22: OK -22/53 Test #22: volume_test-1 .................... Passed 1.72 sec +22/53 Test #22: volume_test-1 .................... Passed 1.66 sec test 23 Start 23: volume_multidim_test @@ -5633,7 +5676,7 @@ 23: test3(8, 5, [13, 16, 17, 11, 23]) 23: Set 894608 values... OK 23: All tests completed without errors. -23/53 Test #23: volume_multidim_test ............. Passed 1.22 sec +23/53 Test #23: volume_multidim_test ............. Passed 1.23 sec test 24 Start 24: test_xfm_1 @@ -5676,14 +5719,14 @@ 29: Test command: /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/verify_xfm "/build/libminc-2.4.05/testdir/vio_xfm_test/test_float.xfm" "/build/libminc-2.4.05/testdir/vio_xfm_test/verify_xfm_table.txt" "1e-9" 29: Working Directory: /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir 29: Test timeout computed to be: 1500 -29/53 Test #29: verify_xfm_float ................. Passed 0.02 sec +29/53 Test #29: verify_xfm_float ................. Passed 0.04 sec test 30 Start 30: verify_xfm_short 30: Test command: /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/verify_xfm "/build/libminc-2.4.05/testdir/vio_xfm_test/test_short.xfm" "/build/libminc-2.4.05/testdir/vio_xfm_test/verify_xfm_table.txt" "1e-4" 30: Working Directory: /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir 30: Test timeout computed to be: 1500 -30/53 Test #30: verify_xfm_short ................. Passed 0.02 sec +30/53 Test #30: verify_xfm_short ................. Passed 0.03 sec test 31 Start 31: verify_xfm_byte @@ -5697,7 +5740,7 @@ 32: Test command: /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/verify_xfm "/build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/t3_copy.xfm" "/build/libminc-2.4.05/testdir/vio_xfm_test/random2" "1e-3" 32: Working Directory: /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir 32: Test timeout computed to be: 1500 -32/53 Test #32: verify_xfm_2 ..................... Passed 0.02 sec +32/53 Test #32: verify_xfm_2 ..................... Passed 0.03 sec test 33 Start 33: test_arg_parse @@ -5713,7 +5756,7 @@ 34: Working Directory: /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir 34: Test timeout computed to be: 1500 34: No errors -34/53 Test #34: minc2-convert-test ............... Passed 20.72 sec +34/53 Test #34: minc2-convert-test ............... Passed 22.17 sec test 35 Start 35: minc2-create-test-images @@ -5725,7 +5768,7 @@ 35: Creating 2D image with IRREGULAR sample dimension!! 35: Creating 3D image with slice scaling!! 35: Creating 4D image with slice scaling!! -35/53 Test #35: minc2-create-test-images ......... Passed 0.08 sec +35/53 Test #35: minc2-create-test-images ......... Passed 0.12 sec test 36 Start 36: minc2-create-test-images-2 @@ -5736,7 +5779,7 @@ 36: No errors 36: Creating 3D image REAL stored as INT w/ slice scaling!! 36: Creating 3D image REAL stored as FLOAT w/ slice scaling!! -36/53 Test #36: minc2-create-test-images-2 ....... Passed 0.08 sec +36/53 Test #36: minc2-create-test-images-2 ....... Passed 0.09 sec test 37 Start 37: minc2-large-attribute-10k @@ -5756,7 +5799,7 @@ 38: 38: No errors 38: Creating 3D image with attribute 100000 ! (3D_image_a.mnc) -38/53 Test #38: minc2-large-attribute-100k ....... Passed 0.03 sec +38/53 Test #38: minc2-large-attribute-100k ....... Passed 0.04 sec test 39 Start 39: minc2-large-attribute-1m @@ -5766,7 +5809,7 @@ 39: 39: No errors 39: Creating 3D image with attribute 1000000 ! (3D_image_a.mnc) -39/53 Test #39: minc2-large-attribute-1m ......... Passed 0.03 sec +39/53 Test #39: minc2-large-attribute-1m ......... Passed 0.04 sec test 40 Start 40: minc2-datatype-test @@ -5774,7 +5817,7 @@ 40: Working Directory: /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir 40: Test timeout computed to be: 1500 40: file: /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/datatype_minc2.mnc type 4 size 0 class 0 -40/53 Test #40: minc2-datatype-test .............. Passed 1.89 sec +40/53 Test #40: minc2-datatype-test .............. Passed 2.31 sec test 41 Start 41: minc2-full-test @@ -5782,7 +5825,7 @@ 41: Working Directory: /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir 41: Test timeout computed to be: 1500 41: No errors -41/53 Test #41: minc2-full-test .................. Passed 1.63 sec +41/53 Test #41: minc2-full-test .................. Passed 1.99 sec test 42 Start 42: minc2-grpattr-test @@ -5792,7 +5835,7 @@ 42: No errors 42: copy all attributes in the provided path in the new volume 42: ***************** -42/53 Test #42: minc2-grpattr-test ............... Passed 0.02 sec +42/53 Test #42: minc2-grpattr-test ............... Passed 0.03 sec test 43 Start 43: minc2-hyper-test-2 @@ -5820,7 +5863,7 @@ 43: Test from hyperslab: 9.663912 43: Test from voxel scaled: 9.663912 43: Test voxel value itself: 5371.000000 -43/53 Test #43: minc2-hyper-test-2 ............... Passed 0.09 sec +43/53 Test #43: minc2-hyper-test-2 ............... Passed 0.10 sec test 44 Start 44: minc2-hyper-test @@ -5885,7 +5928,7 @@ 46: Selecting quarter-size image 46: Return to full resolution. 46: Flush any remaining thumbnails. -46/53 Test #46: minc2-multires-test .............. Passed 2.17 sec +46/53 Test #46: minc2-multires-test .............. Passed 3.30 sec test 47 Start 47: minc2-record-test @@ -5893,7 +5936,7 @@ 47: Working Directory: /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir 47: Test timeout computed to be: 1500 47: No errors -47/53 Test #47: minc2-record-test ................ Passed 0.05 sec +47/53 Test #47: minc2-record-test ................ Passed 0.04 sec test 48 Start 48: minc2-slice-test @@ -5903,7 +5946,7 @@ 48: Checking /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/3D_minc2.mnc 48: Checking /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/3D_minc2_int.mnc 48: Checking /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/3D_minc2_float.mnc -48/53 Test #48: minc2-slice-test ................. Passed 0.03 sec +48/53 Test #48: minc2-slice-test ................. Passed 0.04 sec test 49 Start 49: minc2-valid-test @@ -5915,7 +5958,7 @@ 49: min -2147483648.000000 max 2147483647.000000 49: min -340282346638528859811704183484516925440.000000 max 340282346638528859811704183484516925440.000000 49: min 0.000000 max 255.000000 -49/53 Test #49: minc2-valid-test ................. Passed 0.03 sec +49/53 Test #49: minc2-valid-test ................. Passed 0.04 sec test 50 Start 50: minc2-vector_dimension-test @@ -5945,7 +5988,7 @@ 50: 1 4 7 10 13 16 19 22 25 28 50: Vector Componenet 3 50: 2 5 8 11 14 17 20 23 26 29 -50/53 Test #50: minc2-vector_dimension-test ...... Passed 0.97 sec +50/53 Test #50: minc2-vector_dimension-test ...... Passed 0.76 sec test 51 Start 51: minc2-volprops-test @@ -5965,9 +6008,9 @@ 52: Test command: /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir/minc2-leak-test 52: Working Directory: /build/libminc-2.4.05/obj-x86_64-linux-gnu/testdir 52: Test timeout computed to be: 1500 -52: Created test image 'minc2-leak-3129416.mnc' +52: Created test image 'minc2-leak-2048095.mnc' 52: Done. -52/53 Test #52: minc2-leak-test .................. Passed 24.20 sec +52/53 Test #52: minc2-leak-test .................. Passed 26.33 sec test 53 Start 53: minc2-float-voxel-test @@ -5978,13 +6021,13 @@ 100% tests passed, 0 tests failed out of 53 -Total Test time (real) = 56.60 sec +Total Test time (real) = 62.24 sec make[2]: Leaving directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' make[1]: Leaving directory '/build/libminc-2.4.05' create-stamp debian/debhelper-build-stamp dh_prep dh_auto_install - cd obj-x86_64-linux-gnu && make -j15 install DESTDIR=/build/libminc-2.4.05/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" + cd obj-x86_64-linux-gnu && make -j16 install DESTDIR=/build/libminc-2.4.05/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/libminc-2.4.05/obj-x86_64-linux-gnu' /usr/bin/cmake -S/build/libminc-2.4.05 -B/build/libminc-2.4.05/obj-x86_64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 preinstall @@ -6063,8 +6106,8 @@ dh_gencontrol dh_md5sums dh_builddeb -dpkg-deb: building package 'libminc2-5.3.0' in '../libminc2-5.3.0_2.4.05-4_amd64.deb'. dpkg-deb: building package 'libminc2-5.3.0-dbgsym' in '../libminc2-5.3.0-dbgsym_2.4.05-4_amd64.deb'. +dpkg-deb: building package 'libminc2-5.3.0' in '../libminc2-5.3.0_2.4.05-4_amd64.deb'. dpkg-deb: building package 'libminc-dev' in '../libminc-dev_2.4.05-4_amd64.deb'. dpkg-genbuildinfo --build=binary -O../libminc_2.4.05-4_amd64.buildinfo dpkg-genchanges --build=binary -O../libminc_2.4.05-4_amd64.changes @@ -6073,12 +6116,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/2026746/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/2026746/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/3106525 and its subdirectories -I: Current time: Sat May 6 03:28:43 -12 2023 -I: pbuilder-time-stamp: 1683386923 +I: removing directory /srv/workspace/pbuilder/2026746 and its subdirectories +I: Current time: Sat Jun 8 11:53:47 +14 2024 +I: pbuilder-time-stamp: 1717797227