Diff of the two buildlogs:

--
--- b1/build.log	2023-05-29 17:02:30.219066059 +0000
+++ b2/build.log	2023-05-29 17:03:21.796804116 +0000
@@ -1,6 +1,6 @@
 I: pbuilder: network access will be disabled during build
-I: Current time: Sun Jun 30 11:24:53 -12 2024
-I: pbuilder-time-stamp: 1719789893
+I: Current time: Tue May 30 07:02:31 +14 2023
+I: pbuilder-time-stamp: 1685379751
 I: Building the build Environment
 I: extracting base tarball [/var/cache/pbuilder/bookworm-reproducible-base.tgz]
 I: copying local configuration
@@ -16,7 +16,7 @@
 I: copying [./hmmer2_2.3.2+dfsg.orig.tar.xz]
 I: copying [./hmmer2_2.3.2+dfsg-8.debian.tar.xz]
 I: Extracting source
-gpgv: Signature made Sun Dec 11 04:03:58 2022 -12
+gpgv: Signature made Mon Dec 12 06:03:58 2022 +14
 gpgv:                using RSA key F1F007320A035541F0A663CA578A0494D1C646D1
 gpgv:                issuer "tille@debian.org"
 gpgv: Can't check signature: No public key
@@ -33,135 +33,167 @@
 dpkg-source: info: applying add-runstatedir-option.patch
 I: Not using root during the build.
 I: Installing the build-deps
-I: user script /srv/workspace/pbuilder/1594052/tmp/hooks/D02_print_environment starting
+I: user script /srv/workspace/pbuilder/2921262/tmp/hooks/D01_modify_environment starting
+debug: Running on ionos1-amd64.
+I: Changing host+domainname to test build reproducibility
+I: Adding a custom variable just for the fun of it...
+I: Changing /bin/sh to bash
+'/bin/sh' -> '/bin/bash'
+lrwxrwxrwx 1 root root 9 May 30 07:02 /bin/sh -> /bin/bash
+I: Setting pbuilder2's login shell to /bin/bash
+I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other
+I: user script /srv/workspace/pbuilder/2921262/tmp/hooks/D01_modify_environment finished
+I: user script /srv/workspace/pbuilder/2921262/tmp/hooks/D02_print_environment starting
 I: set
-  BUILDDIR='/build'
-  BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other'
-  BUILDUSERNAME='pbuilder1'
-  BUILD_ARCH='amd64'
-  DEBIAN_FRONTEND='noninteractive'
-  DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=16 '
-  DISTRIBUTION='bookworm'
-  HOME='/root'
-  HOST_ARCH='amd64'
+  BASH=/bin/sh
+  BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath
+  BASH_ALIASES=()
+  BASH_ARGC=()
+  BASH_ARGV=()
+  BASH_CMDS=()
+  BASH_LINENO=([0]="12" [1]="0")
+  BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:.
+  BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment")
+  BASH_VERSINFO=([0]="5" [1]="2" [2]="15" [3]="1" [4]="release" [5]="x86_64-pc-linux-gnu")
+  BASH_VERSION='5.2.15(1)-release'
+  BUILDDIR=/build
+  BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other'
+  BUILDUSERNAME=pbuilder2
+  BUILD_ARCH=amd64
+  DEBIAN_FRONTEND=noninteractive
+  DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=15 '
+  DIRSTACK=()
+  DISTRIBUTION=bookworm
+  EUID=0
+  FUNCNAME=([0]="Echo" [1]="main")
+  GROUPS=()
+  HOME=/root
+  HOSTNAME=i-capture-the-hostname
+  HOSTTYPE=x86_64
+  HOST_ARCH=amd64
   IFS=' 	
   '
-  INVOCATION_ID='ba2fdb77b44740abb9c8a349f7dad914'
-  LANG='C'
-  LANGUAGE='en_US:en'
-  LC_ALL='C'
-  MAIL='/var/mail/root'
-  OPTIND='1'
-  PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games'
-  PBCURRENTCOMMANDLINEOPERATION='build'
-  PBUILDER_OPERATION='build'
-  PBUILDER_PKGDATADIR='/usr/share/pbuilder'
-  PBUILDER_PKGLIBDIR='/usr/lib/pbuilder'
-  PBUILDER_SYSCONFDIR='/etc'
-  PPID='1594052'
-  PS1='# '
-  PS2='> '
+  INVOCATION_ID=efa01a5d47aa4f7881b057e8d60d22bd
+  LANG=C
+  LANGUAGE=et_EE:et
+  LC_ALL=C
+  MACHTYPE=x86_64-pc-linux-gnu
+  MAIL=/var/mail/root
+  OPTERR=1
+  OPTIND=1
+  OSTYPE=linux-gnu
+  PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path
+  PBCURRENTCOMMANDLINEOPERATION=build
+  PBUILDER_OPERATION=build
+  PBUILDER_PKGDATADIR=/usr/share/pbuilder
+  PBUILDER_PKGLIBDIR=/usr/lib/pbuilder
+  PBUILDER_SYSCONFDIR=/etc
+  PIPESTATUS=([0]="0")
+  POSIXLY_CORRECT=y
+  PPID=2921262
   PS4='+ '
-  PWD='/'
-  SHELL='/bin/bash'
-  SHLVL='2'
-  SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.TZDV5VK3/pbuilderrc_XenV --distribution bookworm --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bookworm-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.TZDV5VK3/b1 --logfile b1/build.log hmmer2_2.3.2+dfsg-8.dsc'
-  SUDO_GID='111'
-  SUDO_UID='106'
-  SUDO_USER='jenkins'
-  TERM='unknown'
-  TZ='/usr/share/zoneinfo/Etc/GMT+12'
-  USER='root'
-  _='/usr/bin/systemd-run'
-  http_proxy='http://85.184.249.68:3128'
+  PWD=/
+  SHELL=/bin/bash
+  SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix
+  SHLVL=3
+  SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.TZDV5VK3/pbuilderrc_4dTC --distribution bookworm --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bookworm-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.TZDV5VK3/b2 --logfile b2/build.log --extrapackages usrmerge hmmer2_2.3.2+dfsg-8.dsc'
+  SUDO_GID=110
+  SUDO_UID=105
+  SUDO_USER=jenkins
+  TERM=unknown
+  TZ=/usr/share/zoneinfo/Etc/GMT-14
+  UID=0
+  USER=root
+  _='I: set'
+  http_proxy=http://78.137.99.97:3128
 I: uname -a
-  Linux ionos15-amd64 6.1.0-0.deb11.7-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.20-2~bpo11+1 (2023-04-23) x86_64 GNU/Linux
+  Linux i-capture-the-hostname 5.10.0-23-amd64 #1 SMP Debian 5.10.179-1 (2023-05-12) x86_64 GNU/Linux
 I: ls -l /bin
   total 5632
-  -rwxr-xr-x 1 root root 1265648 Apr 23  2023 bash
-  -rwxr-xr-x 3 root root   39224 Sep 18  2022 bunzip2
-  -rwxr-xr-x 3 root root   39224 Sep 18  2022 bzcat
-  lrwxrwxrwx 1 root root       6 Sep 18  2022 bzcmp -> bzdiff
-  -rwxr-xr-x 1 root root    2225 Sep 18  2022 bzdiff
-  lrwxrwxrwx 1 root root       6 Sep 18  2022 bzegrep -> bzgrep
-  -rwxr-xr-x 1 root root    4893 Nov 27  2021 bzexe
-  lrwxrwxrwx 1 root root       6 Sep 18  2022 bzfgrep -> bzgrep
-  -rwxr-xr-x 1 root root    3775 Sep 18  2022 bzgrep
-  -rwxr-xr-x 3 root root   39224 Sep 18  2022 bzip2
-  -rwxr-xr-x 1 root root   14568 Sep 18  2022 bzip2recover
-  lrwxrwxrwx 1 root root       6 Sep 18  2022 bzless -> bzmore
-  -rwxr-xr-x 1 root root    1297 Sep 18  2022 bzmore
-  -rwxr-xr-x 1 root root   44016 Sep 20  2022 cat
-  -rwxr-xr-x 1 root root   68656 Sep 20  2022 chgrp
-  -rwxr-xr-x 1 root root   64496 Sep 20  2022 chmod
-  -rwxr-xr-x 1 root root   72752 Sep 20  2022 chown
-  -rwxr-xr-x 1 root root  151152 Sep 20  2022 cp
-  -rwxr-xr-x 1 root root  125640 Jan  5  2023 dash
-  -rwxr-xr-x 1 root root  121904 Sep 20  2022 date
-  -rwxr-xr-x 1 root root   89240 Sep 20  2022 dd
-  -rwxr-xr-x 1 root root  102200 Sep 20  2022 df
-  -rwxr-xr-x 1 root root  151344 Sep 20  2022 dir
-  -rwxr-xr-x 1 root root   88656 Mar 22  2023 dmesg
-  lrwxrwxrwx 1 root root       8 Dec 19  2022 dnsdomainname -> hostname
-  lrwxrwxrwx 1 root root       8 Dec 19  2022 domainname -> hostname
-  -rwxr-xr-x 1 root root   43856 Sep 20  2022 echo
-  -rwxr-xr-x 1 root root      41 Jan 24  2023 egrep
-  -rwxr-xr-x 1 root root   35664 Sep 20  2022 false
-  -rwxr-xr-x 1 root root      41 Jan 24  2023 fgrep
-  -rwxr-xr-x 1 root root   85600 Mar 22  2023 findmnt
-  -rwsr-xr-x 1 root root   35128 Mar 22  2023 fusermount
-  -rwxr-xr-x 1 root root  203152 Jan 24  2023 grep
-  -rwxr-xr-x 2 root root    2346 Apr  9  2022 gunzip
-  -rwxr-xr-x 1 root root    6447 Apr  9  2022 gzexe
-  -rwxr-xr-x 1 root root   98136 Apr  9  2022 gzip
-  -rwxr-xr-x 1 root root   22680 Dec 19  2022 hostname
-  -rwxr-xr-x 1 root root   72824 Sep 20  2022 ln
-  -rwxr-xr-x 1 root root   53024 Mar 23  2023 login
-  -rwxr-xr-x 1 root root  151344 Sep 20  2022 ls
-  -rwxr-xr-x 1 root root  207168 Mar 22  2023 lsblk
-  -rwxr-xr-x 1 root root   97552 Sep 20  2022 mkdir
-  -rwxr-xr-x 1 root root   72912 Sep 20  2022 mknod
-  -rwxr-xr-x 1 root root   43952 Sep 20  2022 mktemp
-  -rwxr-xr-x 1 root root   59712 Mar 22  2023 more
-  -rwsr-xr-x 1 root root   59704 Mar 22  2023 mount
-  -rwxr-xr-x 1 root root   18744 Mar 22  2023 mountpoint
-  -rwxr-xr-x 1 root root  142968 Sep 20  2022 mv
-  lrwxrwxrwx 1 root root       8 Dec 19  2022 nisdomainname -> hostname
-  lrwxrwxrwx 1 root root      14 Apr  2  2023 pidof -> /sbin/killall5
-  -rwxr-xr-x 1 root root   43952 Sep 20  2022 pwd
-  lrwxrwxrwx 1 root root       4 Apr 23  2023 rbash -> bash
-  -rwxr-xr-x 1 root root   52112 Sep 20  2022 readlink
-  -rwxr-xr-x 1 root root   72752 Sep 20  2022 rm
-  -rwxr-xr-x 1 root root   56240 Sep 20  2022 rmdir
-  -rwxr-xr-x 1 root root   27560 Nov  2  2022 run-parts
-  -rwxr-xr-x 1 root root  126424 Jan  5  2023 sed
-  lrwxrwxrwx 1 root root       4 Jan  5  2023 sh -> dash
-  -rwxr-xr-x 1 root root   43888 Sep 20  2022 sleep
-  -rwxr-xr-x 1 root root   85008 Sep 20  2022 stty
-  -rwsr-xr-x 1 root root   72000 Mar 22  2023 su
-  -rwxr-xr-x 1 root root   39824 Sep 20  2022 sync
-  -rwxr-xr-x 1 root root  531984 Apr  6  2023 tar
-  -rwxr-xr-x 1 root root   14520 Nov  2  2022 tempfile
-  -rwxr-xr-x 1 root root  109616 Sep 20  2022 touch
-  -rwxr-xr-x 1 root root   35664 Sep 20  2022 true
-  -rwxr-xr-x 1 root root   14568 Mar 22  2023 ulockmgr_server
-  -rwsr-xr-x 1 root root   35128 Mar 22  2023 umount
-  -rwxr-xr-x 1 root root   43888 Sep 20  2022 uname
-  -rwxr-xr-x 2 root root    2346 Apr  9  2022 uncompress
-  -rwxr-xr-x 1 root root  151344 Sep 20  2022 vdir
-  -rwxr-xr-x 1 root root   72024 Mar 22  2023 wdctl
-  lrwxrwxrwx 1 root root       8 Dec 19  2022 ypdomainname -> hostname
-  -rwxr-xr-x 1 root root    1984 Apr  9  2022 zcat
-  -rwxr-xr-x 1 root root    1678 Apr  9  2022 zcmp
-  -rwxr-xr-x 1 root root    6460 Apr  9  2022 zdiff
-  -rwxr-xr-x 1 root root      29 Apr  9  2022 zegrep
-  -rwxr-xr-x 1 root root      29 Apr  9  2022 zfgrep
-  -rwxr-xr-x 1 root root    2081 Apr  9  2022 zforce
-  -rwxr-xr-x 1 root root    8103 Apr  9  2022 zgrep
-  -rwxr-xr-x 1 root root    2206 Apr  9  2022 zless
-  -rwxr-xr-x 1 root root    1842 Apr  9  2022 zmore
-  -rwxr-xr-x 1 root root    4577 Apr  9  2022 znew
-I: user script /srv/workspace/pbuilder/1594052/tmp/hooks/D02_print_environment finished
+  -rwxr-xr-x 1 root root 1265648 Apr 24 11:23 bash
+  -rwxr-xr-x 3 root root   39224 Sep 19  2022 bunzip2
+  -rwxr-xr-x 3 root root   39224 Sep 19  2022 bzcat
+  lrwxrwxrwx 1 root root       6 Sep 19  2022 bzcmp -> bzdiff
+  -rwxr-xr-x 1 root root    2225 Sep 19  2022 bzdiff
+  lrwxrwxrwx 1 root root       6 Sep 19  2022 bzegrep -> bzgrep
+  -rwxr-xr-x 1 root root    4893 Nov 28  2021 bzexe
+  lrwxrwxrwx 1 root root       6 Sep 19  2022 bzfgrep -> bzgrep
+  -rwxr-xr-x 1 root root    3775 Sep 19  2022 bzgrep
+  -rwxr-xr-x 3 root root   39224 Sep 19  2022 bzip2
+  -rwxr-xr-x 1 root root   14568 Sep 19  2022 bzip2recover
+  lrwxrwxrwx 1 root root       6 Sep 19  2022 bzless -> bzmore
+  -rwxr-xr-x 1 root root    1297 Sep 19  2022 bzmore
+  -rwxr-xr-x 1 root root   44016 Sep 21  2022 cat
+  -rwxr-xr-x 1 root root   68656 Sep 21  2022 chgrp
+  -rwxr-xr-x 1 root root   64496 Sep 21  2022 chmod
+  -rwxr-xr-x 1 root root   72752 Sep 21  2022 chown
+  -rwxr-xr-x 1 root root  151152 Sep 21  2022 cp
+  -rwxr-xr-x 1 root root  125640 Jan  6 03:20 dash
+  -rwxr-xr-x 1 root root  121904 Sep 21  2022 date
+  -rwxr-xr-x 1 root root   89240 Sep 21  2022 dd
+  -rwxr-xr-x 1 root root  102200 Sep 21  2022 df
+  -rwxr-xr-x 1 root root  151344 Sep 21  2022 dir
+  -rwxr-xr-x 1 root root   88656 Mar 24 00:02 dmesg
+  lrwxrwxrwx 1 root root       8 Dec 20 03:33 dnsdomainname -> hostname
+  lrwxrwxrwx 1 root root       8 Dec 20 03:33 domainname -> hostname
+  -rwxr-xr-x 1 root root   43856 Sep 21  2022 echo
+  -rwxr-xr-x 1 root root      41 Jan 25 04:43 egrep
+  -rwxr-xr-x 1 root root   35664 Sep 21  2022 false
+  -rwxr-xr-x 1 root root      41 Jan 25 04:43 fgrep
+  -rwxr-xr-x 1 root root   85600 Mar 24 00:02 findmnt
+  -rwsr-xr-x 1 root root   35128 Mar 23 22:35 fusermount
+  -rwxr-xr-x 1 root root  203152 Jan 25 04:43 grep
+  -rwxr-xr-x 2 root root    2346 Apr 10  2022 gunzip
+  -rwxr-xr-x 1 root root    6447 Apr 10  2022 gzexe
+  -rwxr-xr-x 1 root root   98136 Apr 10  2022 gzip
+  -rwxr-xr-x 1 root root   22680 Dec 20 03:33 hostname
+  -rwxr-xr-x 1 root root   72824 Sep 21  2022 ln
+  -rwxr-xr-x 1 root root   53024 Mar 24 02:40 login
+  -rwxr-xr-x 1 root root  151344 Sep 21  2022 ls
+  -rwxr-xr-x 1 root root  207168 Mar 24 00:02 lsblk
+  -rwxr-xr-x 1 root root   97552 Sep 21  2022 mkdir
+  -rwxr-xr-x 1 root root   72912 Sep 21  2022 mknod
+  -rwxr-xr-x 1 root root   43952 Sep 21  2022 mktemp
+  -rwxr-xr-x 1 root root   59712 Mar 24 00:02 more
+  -rwsr-xr-x 1 root root   59704 Mar 24 00:02 mount
+  -rwxr-xr-x 1 root root   18744 Mar 24 00:02 mountpoint
+  -rwxr-xr-x 1 root root  142968 Sep 21  2022 mv
+  lrwxrwxrwx 1 root root       8 Dec 20 03:33 nisdomainname -> hostname
+  lrwxrwxrwx 1 root root      14 Apr  3 20:25 pidof -> /sbin/killall5
+  -rwxr-xr-x 1 root root   43952 Sep 21  2022 pwd
+  lrwxrwxrwx 1 root root       4 Apr 24 11:23 rbash -> bash
+  -rwxr-xr-x 1 root root   52112 Sep 21  2022 readlink
+  -rwxr-xr-x 1 root root   72752 Sep 21  2022 rm
+  -rwxr-xr-x 1 root root   56240 Sep 21  2022 rmdir
+  -rwxr-xr-x 1 root root   27560 Nov  3  2022 run-parts
+  -rwxr-xr-x 1 root root  126424 Jan  6 09:55 sed
+  lrwxrwxrwx 1 root root       9 May 30 07:02 sh -> /bin/bash
+  -rwxr-xr-x 1 root root   43888 Sep 21  2022 sleep
+  -rwxr-xr-x 1 root root   85008 Sep 21  2022 stty
+  -rwsr-xr-x 1 root root   72000 Mar 24 00:02 su
+  -rwxr-xr-x 1 root root   39824 Sep 21  2022 sync
+  -rwxr-xr-x 1 root root  531984 Apr  7 04:25 tar
+  -rwxr-xr-x 1 root root   14520 Nov  3  2022 tempfile
+  -rwxr-xr-x 1 root root  109616 Sep 21  2022 touch
+  -rwxr-xr-x 1 root root   35664 Sep 21  2022 true
+  -rwxr-xr-x 1 root root   14568 Mar 23 22:35 ulockmgr_server
+  -rwsr-xr-x 1 root root   35128 Mar 24 00:02 umount
+  -rwxr-xr-x 1 root root   43888 Sep 21  2022 uname
+  -rwxr-xr-x 2 root root    2346 Apr 10  2022 uncompress
+  -rwxr-xr-x 1 root root  151344 Sep 21  2022 vdir
+  -rwxr-xr-x 1 root root   72024 Mar 24 00:02 wdctl
+  lrwxrwxrwx 1 root root       8 Dec 20 03:33 ypdomainname -> hostname
+  -rwxr-xr-x 1 root root    1984 Apr 10  2022 zcat
+  -rwxr-xr-x 1 root root    1678 Apr 10  2022 zcmp
+  -rwxr-xr-x 1 root root    6460 Apr 10  2022 zdiff
+  -rwxr-xr-x 1 root root      29 Apr 10  2022 zegrep
+  -rwxr-xr-x 1 root root      29 Apr 10  2022 zfgrep
+  -rwxr-xr-x 1 root root    2081 Apr 10  2022 zforce
+  -rwxr-xr-x 1 root root    8103 Apr 10  2022 zgrep
+  -rwxr-xr-x 1 root root    2206 Apr 10  2022 zless
+  -rwxr-xr-x 1 root root    1842 Apr 10  2022 zmore
+  -rwxr-xr-x 1 root root    4577 Apr 10  2022 znew
+I: user script /srv/workspace/pbuilder/2921262/tmp/hooks/D02_print_environment finished
  -> Attempting to satisfy build-dependencies
  -> Creating pbuilder-satisfydepends-dummy package
 Package: pbuilder-satisfydepends-dummy
@@ -246,7 +278,7 @@
 Get: 37 http://deb.debian.org/debian bookworm/main amd64 pkgconf amd64 1.8.1-1 [25.9 kB]
 Get: 38 http://deb.debian.org/debian bookworm/main amd64 pkg-config amd64 1.8.1-1 [13.7 kB]
 Get: 39 http://deb.debian.org/debian bookworm/main amd64 rename all 2.01-1 [21.0 kB]
-Fetched 19.1 MB in 0s (85.2 MB/s)
+Fetched 19.1 MB in 1s (22.6 MB/s)
 debconf: delaying package configuration, since apt-utils is not installed
 Selecting previously unselected package sensible-utils.
 (Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 19591 files and directories currently installed.)
@@ -417,8 +449,19 @@
 Writing extended state information...
 Building tag database...
  -> Finished parsing the build-deps
+Reading package lists...
+Building dependency tree...
+Reading state information...
+usrmerge is already the newest version (35).
+0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
 I: Building the package
-I: Running cd /build/hmmer2-2.3.2+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S  > ../hmmer2_2.3.2+dfsg-8_source.changes
+I: user script /srv/workspace/pbuilder/2921262/tmp/hooks/A99_set_merged_usr starting
+Re-configuring usrmerge...
+removed '/etc/unsupported-skip-usrmerge-conversion'
+The system has been successfully converted.
+I: user script /srv/workspace/pbuilder/2921262/tmp/hooks/A99_set_merged_usr finished
+hostname: Name or service not known
+I: Running cd /build/hmmer2-2.3.2+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S  > ../hmmer2_2.3.2+dfsg-8_source.changes
 dpkg-buildpackage: info: source package hmmer2
 dpkg-buildpackage: info: source version 2.3.2+dfsg-8
 dpkg-buildpackage: info: source distribution unstable
@@ -515,7 +558,7 @@
        src/config.h
 make[1]: Leaving directory '/build/hmmer2-2.3.2+dfsg'
    dh_auto_build
-	make -j16
+	make -j15
 make[1]: Entering directory '/build/hmmer2-2.3.2+dfsg'
 make[2]: Entering directory '/build/hmmer2-2.3.2+dfsg/src'
 gcc -g -O2 -ffile-prefix-map=/build/hmmer2-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_CONFIG_H  `pkg-config --cflags libsquid`  -c hmmalign.c
@@ -533,15 +576,15 @@
 gcc -g -O2 -ffile-prefix-map=/build/hmmer2-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_CONFIG_H  `pkg-config --cflags libsquid`  -c misc.c
 gcc -g -O2 -ffile-prefix-map=/build/hmmer2-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_CONFIG_H  `pkg-config --cflags libsquid`  -c modelmakers.c
 gcc -g -O2 -ffile-prefix-map=/build/hmmer2-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_CONFIG_H  `pkg-config --cflags libsquid`  -c plan7.c
-gcc -g -O2 -ffile-prefix-map=/build/hmmer2-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_CONFIG_H  `pkg-config --cflags libsquid`  -c plan9.c
-mathsupport.c: In function 'Logp_cvec':
-mathsupport.c:229:15: warning: implicit declaration of function 'Gammln' [-Wimplicit-function-declaration]
-  229 |       lnp  += Gammln(alpha[x] + cvec[x]);
-      |               ^~~~~~
 histogram.c: In function 'ExtremeValueSetHistogram':
 histogram.c:725:23: warning: implicit declaration of function 'IncompleteGamma' [-Wimplicit-function-declaration]
   725 |     h->chip = (float) IncompleteGamma((double)(nbins-1-ndegrees)/2.,
       |                       ^~~~~~~~~~~~~~~
+mathsupport.c: In function 'Logp_cvec':
+mathsupport.c:229:15: warning: implicit declaration of function 'Gammln' [-Wimplicit-function-declaration]
+  229 |       lnp  += Gammln(alpha[x] + cvec[x]);
+      |               ^~~~~~
+gcc -g -O2 -ffile-prefix-map=/build/hmmer2-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_CONFIG_H  `pkg-config --cflags libsquid`  -c plan9.c
 gcc -g -O2 -ffile-prefix-map=/build/hmmer2-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_CONFIG_H  `pkg-config --cflags libsquid`  -c postprob.c
 gcc -g -O2 -ffile-prefix-map=/build/hmmer2-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_CONFIG_H  `pkg-config --cflags libsquid`  -c prior.c
 gcc -g -O2 -ffile-prefix-map=/build/hmmer2-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_CONFIG_H  `pkg-config --cflags libsquid`  -c pvm.c
@@ -553,12 +596,12 @@
 gcc -g -O2 -ffile-prefix-map=/build/hmmer2-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_CONFIG_H  `pkg-config --cflags libsquid`  -c hmmconvert.c
 gcc -g -O2 -ffile-prefix-map=/build/hmmer2-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_CONFIG_H  `pkg-config --cflags libsquid`  -c hmmemit.c
 gcc -g -O2 -ffile-prefix-map=/build/hmmer2-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_CONFIG_H  `pkg-config --cflags libsquid`  -c hmmfetch.c
-gcc -g -O2 -ffile-prefix-map=/build/hmmer2-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_CONFIG_H  `pkg-config --cflags libsquid`  -c hmmindex.c
-gcc -g -O2 -ffile-prefix-map=/build/hmmer2-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_CONFIG_H  `pkg-config --cflags libsquid`  -c hmmpfam.c
 hmmcalibrate.c: In function 'workpool_start':
 hmmcalibrate.c:646:3: warning: implicit declaration of function 'pthread_setconcurrency' [-Wimplicit-function-declaration]
   646 |   pthread_setconcurrency(num_threads+1);
       |   ^~~~~~~~~~~~~~~~~~~~~~
+gcc -g -O2 -ffile-prefix-map=/build/hmmer2-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_CONFIG_H  `pkg-config --cflags libsquid`  -c hmmindex.c
+gcc -g -O2 -ffile-prefix-map=/build/hmmer2-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_CONFIG_H  `pkg-config --cflags libsquid`  -c hmmpfam.c
 gcc -g -O2 -ffile-prefix-map=/build/hmmer2-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_CONFIG_H  `pkg-config --cflags libsquid`  -c hmmsearch.c
 hmmpfam.c: In function 'workpool_start':
 hmmpfam.c:1032:3: warning: implicit declaration of function 'pthread_setconcurrency' [-Wimplicit-function-declaration]
@@ -613,12 +656,12 @@
 gcc -g -O2 -ffile-prefix-map=/build/hmmer2-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security  -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_CONFIG_H `pkg-config --cflags libsquid` -I../src -c trace_test.c		
 gcc -g -O2 -ffile-prefix-map=/build/hmmer2-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security  -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_CONFIG_H `pkg-config --cflags libsquid` -I../src -c viterbi_exercise.c		
 gcc -g -O2 -ffile-prefix-map=/build/hmmer2-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security  -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_CONFIG_H `pkg-config --cflags libsquid` -I../src -c weeviterbi_test.c		
-gcc -g -O2 -ffile-prefix-map=/build/hmmer2-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security  -Wl,-z,relro -Wl,-z,now -DHAVE_CONFIG_H -o trace_test -L../src trace_test.o -lhmmer `pkg-config --libs libsquid`  -lm
-gcc -g -O2 -ffile-prefix-map=/build/hmmer2-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security  -Wl,-z,relro -Wl,-z,now -DHAVE_CONFIG_H -o tophits_test -L../src tophits_test.o -lhmmer `pkg-config --libs libsquid`  -lm
 gcc -g -O2 -ffile-prefix-map=/build/hmmer2-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security  -Wl,-z,relro -Wl,-z,now -DHAVE_CONFIG_H -o masks_test -L../src masks_test.o -lhmmer `pkg-config --libs libsquid`  -lm
+gcc -g -O2 -ffile-prefix-map=/build/hmmer2-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security  -Wl,-z,relro -Wl,-z,now -DHAVE_CONFIG_H -o trace_test -L../src trace_test.o -lhmmer `pkg-config --libs libsquid`  -lm
 gcc -g -O2 -ffile-prefix-map=/build/hmmer2-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security  -Wl,-z,relro -Wl,-z,now -DHAVE_CONFIG_H -o weeviterbi_test -L../src weeviterbi_test.o -lhmmer `pkg-config --libs libsquid`  -lm
-gcc -g -O2 -ffile-prefix-map=/build/hmmer2-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security  -Wl,-z,relro -Wl,-z,now -DHAVE_CONFIG_H -o alignalign_test -L../src alignalign_test.o -lhmmer `pkg-config --libs libsquid`  -lm
 gcc -g -O2 -ffile-prefix-map=/build/hmmer2-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security  -Wl,-z,relro -Wl,-z,now -DHAVE_CONFIG_H -o parsingviterbi_test -L../src parsingviterbi_test.o -lhmmer `pkg-config --libs libsquid`  -lm
+gcc -g -O2 -ffile-prefix-map=/build/hmmer2-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security  -Wl,-z,relro -Wl,-z,now -DHAVE_CONFIG_H -o tophits_test -L../src tophits_test.o -lhmmer `pkg-config --libs libsquid`  -lm
+gcc -g -O2 -ffile-prefix-map=/build/hmmer2-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security  -Wl,-z,relro -Wl,-z,now -DHAVE_CONFIG_H -o alignalign_test -L../src alignalign_test.o -lhmmer `pkg-config --libs libsquid`  -lm
 gcc -g -O2 -ffile-prefix-map=/build/hmmer2-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security  -Wl,-z,relro -Wl,-z,now -DHAVE_CONFIG_H -o viterbi_exercise -L../src viterbi_exercise.o -lhmmer `pkg-config --libs libsquid`  -lm
 gcc -g -O2 -ffile-prefix-map=/build/hmmer2-2.3.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security  -Wl,-z,relro -Wl,-z,now -DHAVE_CONFIG_H -o evd_test -L../src evd_test.o -lhmmer `pkg-config --libs libsquid`  -lm
 make[2]: Leaving directory '/build/hmmer2-2.3.2+dfsg/testsuite'
@@ -626,7 +669,7 @@
    debian/rules override_dh_auto_test
 make[1]: Entering directory '/build/hmmer2-2.3.2+dfsg'
 dh_auto_test
-	make -j16 check "TESTSUITEFLAGS=-j16 --verbose" VERBOSE=1
+	make -j15 check "TESTSUITEFLAGS=-j15 --verbose" VERBOSE=1
 make[2]: Entering directory '/build/hmmer2-2.3.2+dfsg'
 (cd testsuite; make check)
 make[3]: Entering directory '/build/hmmer2-2.3.2+dfsg/testsuite'
@@ -761,8 +804,8 @@
 
 
 System information:
-Sun Jun 30 11:25:21 -12 2024
-Linux ionos15-amd64 6.1.0-0.deb11.7-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.20-2~bpo11+1 (2023-04-23) x86_64 GNU/Linux
+Tue May 30 07:03:10 +14 2023
+Linux i-capture-the-hostname 5.10.0-23-amd64 #1 SMP Debian 5.10.179-1 (2023-05-12) x86_64 GNU/Linux
 make[3]: Leaving directory '/build/hmmer2-2.3.2+dfsg/testsuite'
 make[2]: Leaving directory '/build/hmmer2-2.3.2+dfsg'
 rm -f testsuite/*.ssi
@@ -776,7 +819,7 @@
    debian/rules override_dh_auto_install
 make[1]: Entering directory '/build/hmmer2-2.3.2+dfsg'
 dh_auto_install -- prefix=/build/hmmer2-2.3.2+dfsg/debian/tmp
-	make -j16 install DESTDIR=/build/hmmer2-2.3.2\+dfsg/debian/tmp AM_UPDATE_INFO_DIR=no prefix=/build/hmmer2-2.3.2\+dfsg/debian/tmp
+	make -j15 install DESTDIR=/build/hmmer2-2.3.2\+dfsg/debian/tmp AM_UPDATE_INFO_DIR=no prefix=/build/hmmer2-2.3.2\+dfsg/debian/tmp
 make[2]: Entering directory '/build/hmmer2-2.3.2+dfsg'
 mkdir -p /build/hmmer2-2.3.2+dfsg/debian/tmp/bin
 mkdir -p /build/hmmer2-2.3.2+dfsg/debian/tmp/share/man/man1
@@ -825,13 +868,13 @@
    dh_shlibdeps -a
    dh_installdeb
    dh_gencontrol
-dpkg-gencontrol: warning: Depends field of package hmmer2-doc: substitution variable ${shlibs:Depends} used, but is not defined
 dpkg-gencontrol: warning: Depends field of package libhmmer2-dev: substitution variable ${shlibs:Depends} used, but is not defined
+dpkg-gencontrol: warning: Depends field of package hmmer2-doc: substitution variable ${shlibs:Depends} used, but is not defined
    dh_md5sums
    dh_builddeb
 dpkg-deb: building package 'hmmer2' in '../hmmer2_2.3.2+dfsg-8_amd64.deb'.
-dpkg-deb: building package 'hmmer2-doc' in '../hmmer2-doc_2.3.2+dfsg-8_all.deb'.
 dpkg-deb: building package 'hmmer2-dbgsym' in '../hmmer2-dbgsym_2.3.2+dfsg-8_amd64.deb'.
+dpkg-deb: building package 'hmmer2-doc' in '../hmmer2-doc_2.3.2+dfsg-8_all.deb'.
 dpkg-deb: building package 'libhmmer2-dev' in '../libhmmer2-dev_2.3.2+dfsg-8_amd64.deb'.
  dpkg-genbuildinfo --build=binary -O../hmmer2_2.3.2+dfsg-8_amd64.buildinfo
  dpkg-genchanges --build=binary -O../hmmer2_2.3.2+dfsg-8_amd64.changes
@@ -840,12 +883,14 @@
 dpkg-buildpackage: info: binary-only upload (no source included)
 dpkg-genchanges: info: not including original source code in upload
 I: copying local configuration
+I: user script /srv/workspace/pbuilder/2921262/tmp/hooks/B01_cleanup starting
+I: user script /srv/workspace/pbuilder/2921262/tmp/hooks/B01_cleanup finished
 I: unmounting dev/ptmx filesystem
 I: unmounting dev/pts filesystem
 I: unmounting dev/shm filesystem
 I: unmounting proc filesystem
 I: unmounting sys filesystem
 I: cleaning the build env 
-I: removing directory /srv/workspace/pbuilder/1594052 and its subdirectories
-I: Current time: Sun Jun 30 11:25:29 -12 2024
-I: pbuilder-time-stamp: 1719789929
+I: removing directory /srv/workspace/pbuilder/2921262 and its subdirectories
+I: Current time: Tue May 30 07:03:21 +14 2023
+I: pbuilder-time-stamp: 1685379801