{"diffoscope-json-version": 1, "source1": "/srv/reproducible-results/rbuild-debian/r-b-build.iZSdg3j2/b1/cctbx_2024.8+ds2+~3.21.1+ds1-3_amd64.changes", "source2": "/srv/reproducible-results/rbuild-debian/r-b-build.iZSdg3j2/b2/cctbx_2024.8+ds2+~3.21.1+ds1-3_amd64.changes", "unified_diff": null, "details": [{"source1": "Files", "source2": "Files", "unified_diff": "@@ -1,6 +1,6 @@\n \n  d5967e2685d87d00ea64c4c22a5b8829 1160232 devel optional libcctbx-dev_2024.8+ds2+~3.21.1+ds1-3_amd64.deb\n  71d79f92e158cd2822ea7ee92957d8cb 10160528 debug optional libcctbx0-dbgsym_2024.8+ds2+~3.21.1+ds1-3_amd64.deb\n  ea84e578acc79357f175706fdcc12733 2347952 libs optional libcctbx0_2024.8+ds2+~3.21.1+ds1-3_amd64.deb\n  a753b013f10290289d7bc01e26ad73e3 146110024 debug optional python3-cctbx-dbgsym_2024.8+ds2+~3.21.1+ds1-3_amd64.deb\n- 1609f83d881b6e4c5eacb2c6aafbaa7f 37244676 python optional python3-cctbx_2024.8+ds2+~3.21.1+ds1-3_amd64.deb\n+ 84a862deb196ed10601b92aa526ec74d 37245476 python optional python3-cctbx_2024.8+ds2+~3.21.1+ds1-3_amd64.deb\n"}, {"source1": "python3-cctbx_2024.8+ds2+~3.21.1+ds1-3_amd64.deb", "source2": "python3-cctbx_2024.8+ds2+~3.21.1+ds1-3_amd64.deb", "unified_diff": null, "details": [{"source1": "file list", "source2": "file list", "unified_diff": "@@ -1,3 +1,3 @@\n -rw-r--r--   0        0        0        4 2024-10-01 18:12:32.000000 debian-binary\n--rw-r--r--   0        0        0   123784 2024-10-01 18:12:32.000000 control.tar.xz\n--rw-r--r--   0        0        0 37120700 2024-10-01 18:12:32.000000 data.tar.xz\n+-rw-r--r--   0        0        0   123736 2024-10-01 18:12:32.000000 control.tar.xz\n+-rw-r--r--   0        0        0 37121548 2024-10-01 18:12:32.000000 data.tar.xz\n"}, {"source1": "control.tar.xz", "source2": "control.tar.xz", "unified_diff": null, "details": [{"source1": "control.tar", "source2": "control.tar", "unified_diff": null, "details": [{"source1": "./md5sums", "source2": "./md5sums", "unified_diff": null, "details": [{"source1": "./md5sums", "source2": "./md5sums", "comments": ["Files differ"], "unified_diff": null}]}]}]}, {"source1": "data.tar.xz", "source2": "data.tar.xz", "unified_diff": null, "details": [{"source1": "data.tar", "source2": "data.tar", "unified_diff": null, "details": [{"source1": "./usr/lib/cctbx/python3.12/libtbx_env", "source2": "./usr/lib/cctbx/python3.12/libtbx_env", "unified_diff": "@@ -111,59 +111,59 @@\n p49\n NsVexplicitly_requested_modules\n p50\n c__builtin__\n set\n p51\n ((lp52\n-Vccp4io\n+Vserialtbx\n p53\n-aVdxtbx\n+aVfable\n p54\n-aVcctbx\n+aVcbflib_adaptbx\n p55\n-aVannlib\n+aVrstbx\n p56\n-aVgltbx\n+aVsmtbx\n p57\n-aVwxtbx\n+aVdxtbx\n p58\n-aVannlib_adaptbx\n+aVcma_es\n p59\n-aVlibtbx\n+aVcrys3d\n p60\n-aVcma_es\n+aVwxtbx\n p61\n-aVcbflib_adaptbx\n+aVannlib\n p62\n-aVmmtbx\n+aVgltbx\n p63\n-aVrstbx\n+aVccp4io\n p64\n-aVserialtbx\n+aVscitbx\n p65\n-aVccp4io_adaptbx\n+aVcctbx\n p66\n-aVscitbx\n+aVtbxx\n p67\n-aVfable\n+aVboost_adaptbx\n p68\n-aVcrys3d\n+aVannlib_adaptbx\n p69\n-aVspotfinder\n+aVccp4io_adaptbx\n p70\n-aVboost_adaptbx\n+aVmmtbx\n p71\n-aVtbxx\n+aVlibtbx\n p72\n aViotbx\n p73\n-aVsmtbx\n-p74\n aVomptbx\n+p74\n+aVspotfinder\n p75\n atp76\n Rp77\n sVbuild_options\n p78\n g0\n (clibtbx.env_config\n@@ -672,15 +672,15 @@\n g136\n sg137\n Vannlib\n p287\n sg139\n (lp288\n g287\n-ag59\n+ag69\n asg142\n (lp289\n g0\n (g17\n g2\n Ntp290\n Rp291\n@@ -730,15 +730,15 @@\n g136\n sg137\n Vcbflib\n p309\n sg139\n (lp310\n g309\n-ag62\n+ag55\n asg142\n (lp311\n Nag0\n (g17\n g2\n Ntp312\n Rp313\n@@ -777,15 +777,15 @@\n g136\n sg137\n Vccp4io\n p327\n sg139\n (lp328\n g327\n-ag66\n+ag70\n asg142\n (lp329\n g0\n (g17\n g2\n Ntp330\n Rp331\n@@ -877,18 +877,18 @@\n Rp366\n (dp367\n g134\n g4\n sg135\n g136\n sg137\n-g55\n+g66\n sg139\n (lp368\n-g55\n+g66\n aVcctbx_adaptbx\n p369\n asg142\n (lp370\n g0\n (g17\n g2\n@@ -929,18 +929,18 @@\n Rp386\n (dp387\n g134\n g4\n sg135\n g136\n sg137\n-g69\n+g60\n sg139\n (lp388\n-g69\n+g60\n aVcrys3d_adaptbx\n p389\n asg142\n (lp390\n g0\n (g17\n g2\n@@ -1129,18 +1129,18 @@\n Rp465\n (dp466\n g134\n g4\n sg135\n g136\n sg137\n-g54\n+g58\n sg139\n (lp467\n-g54\n+g58\n aVdxtbx_adaptbx\n p468\n asg142\n (lp469\n g0\n (g17\n g2\n@@ -1184,18 +1184,18 @@\n Rp487\n (dp488\n g134\n g4\n sg135\n g136\n sg137\n-g57\n+g63\n sg139\n (lp489\n-g57\n+g63\n aVgltbx_adaptbx\n p490\n asg142\n (lp491\n g0\n (g17\n g2\n@@ -1231,18 +1231,18 @@\n Rp505\n (dp506\n g134\n g4\n sg135\n g136\n sg137\n-g63\n+g71\n sg139\n (lp507\n-g63\n+g71\n aVmmtbx_adaptbx\n p508\n asg142\n (lp509\n g0\n (g17\n g2\n@@ -1336,18 +1336,18 @@\n Rp546\n (dp547\n g134\n g4\n sg135\n g136\n sg137\n-g64\n+g56\n sg139\n (lp548\n-g64\n+g56\n aVrstbx_adaptbx\n p549\n asg142\n (lp550\n g0\n (g17\n g2\n@@ -1387,18 +1387,18 @@\n Rp564\n (dp565\n g134\n g4\n sg135\n g136\n sg137\n-g65\n+g53\n sg139\n (lp566\n-g65\n+g53\n aVserialtbx_adaptbx\n p567\n asg142\n (lp568\n g0\n (g17\n g2\n@@ -1433,18 +1433,18 @@\n Rp582\n (dp583\n g134\n g4\n sg135\n g136\n sg137\n-g58\n+g61\n sg139\n (lp584\n-g58\n+g61\n aVwxtbx_adaptbx\n p585\n asg142\n (lp586\n g0\n (g17\n g2\n@@ -1491,39 +1491,39 @@\n g227\n sg249\n g247\n sg309\n g307\n sg327\n g325\n-sg55\n+sg66\n g366\n sg349\n g347\n-sg69\n+sg60\n g386\n-sg54\n+sg58\n g465\n sg445\n g443\n sg406\n g404\n sg425\n g423\n-sg57\n-g487\n sg63\n+g487\n+sg71\n g505\n-sg64\n+sg56\n g546\n sg528\n g526\n-sg65\n+sg53\n g564\n-sg58\n+sg61\n g582\n ssVmodule_dist_paths\n p601\n (dp602\n g138\n g0\n (g17\n@@ -1544,15 +1544,15 @@\n Rp608\n (dp609\n g21\n g23\n sg26\n Vlib/python3/dist-packages/annlib\n p610\n-sbsg59\n+sbsg69\n g0\n (g17\n g2\n Ntp611\n Rp612\n (dp613\n g21\n@@ -1640,15 +1640,15 @@\n Rp640\n (dp641\n g21\n g23\n sg26\n Vlib/python3/dist-packages/fable\n p642\n-sbsg62\n+sbsg55\n g0\n (g17\n g2\n Ntp643\n Rp644\n (dp645\n g21\n@@ -1664,27 +1664,27 @@\n Rp648\n (dp649\n g21\n g23\n sg26\n Vlib/python3/dist-packages/ccp4io\n p650\n-sbsg66\n+sbsg70\n g0\n (g17\n g2\n Ntp651\n Rp652\n (dp653\n g21\n g23\n sg26\n Vlib/python3/dist-packages/ccp4io_adaptbx\n p654\n-sbsg55\n+sbsg66\n g0\n (g17\n g2\n Ntp655\n Rp656\n (dp657\n g21\n@@ -1700,27 +1700,27 @@\n Rp660\n (dp661\n g21\n g23\n sg26\n Vlib/python3/dist-packages/chiltbx\n p662\n-sbsg69\n+sbsg60\n g0\n (g17\n g2\n Ntp663\n Rp664\n (dp665\n g21\n g23\n sg26\n Vlib/python3/dist-packages/crys3d\n p666\n-sbsg54\n+sbsg58\n g0\n (g17\n g2\n Ntp667\n Rp668\n (dp669\n g21\n@@ -1760,39 +1760,39 @@\n Rp680\n (dp681\n g21\n g23\n sg26\n Vlib/python3/dist-packages/smtbx\n p682\n-sbsg57\n+sbsg63\n g0\n (g17\n g2\n Ntp683\n Rp684\n (dp685\n g21\n g23\n sg26\n Vlib/python3/dist-packages/gltbx\n p686\n-sbsg63\n+sbsg71\n g0\n (g17\n g2\n Ntp687\n Rp688\n (dp689\n g21\n g23\n sg26\n Vlib/python3/dist-packages/mmtbx\n p690\n-sbsg64\n+sbsg56\n g0\n (g17\n g2\n Ntp691\n Rp692\n (dp693\n g21\n@@ -1808,27 +1808,27 @@\n Rp696\n (dp697\n g21\n g23\n sg26\n Vlib/python3/dist-packages/spotfinder\n p698\n-sbsg65\n+sbsg53\n g0\n (g17\n g2\n Ntp699\n Rp700\n (dp701\n g21\n g23\n sg26\n Vlib/python3/dist-packages/serialtbx\n p702\n-sbsg58\n+sbsg61\n g0\n (g17\n g2\n Ntp703\n Rp704\n (dp705\n g21\n@@ -1849,18 +1849,18 @@\n tp713\n Rp714\n sVmissing_optional\n p715\n g51\n ((lp716\n g521\n-ag522\n ag520\n ag460\n ag263\n+ag522\n atp717\n Rp718\n sVscons_dist_path\n p719\n g0\n (g17\n g2\n@@ -1923,2490 +1923,2490 @@\n g2\n Ntp742\n Rp743\n (dp744\n g21\n g23\n sg26\n-Vbin/libtbx.phil\n+Vbin/libtbx.show_date_and_time\n p745\n sbg0\n (g17\n g2\n Ntp746\n Rp747\n (dp748\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/libtbx/command_line/phil.py\n+Vlib/python3/dist-packages/libtbx/command_line/show_date_and_time.py\n p749\n sbsg0\n (g17\n g2\n Ntp750\n Rp751\n (dp752\n g21\n g23\n sg26\n-Vbin/libtbx.latex\n+Vbin/libtbx.scons\n p753\n sbg0\n (g17\n g2\n Ntp754\n Rp755\n (dp756\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/libtbx/command_line/latex.sh\n+Vlib/python3/dist-packages/libtbx/command_line/scons.py\n p757\n sbsg0\n (g17\n g2\n Ntp758\n Rp759\n (dp760\n g21\n g23\n sg26\n-Vbin/libtbx.run_pickled_function\n+Vbin/libtbx.extract_code_from_txt\n p761\n sbg0\n (g17\n g2\n Ntp762\n Rp763\n (dp764\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/libtbx/command_line/run_pickled_function.py\n+Vlib/python3/dist-packages/libtbx/command_line/extract_code_from_txt.py\n p765\n sbsg0\n (g17\n g2\n Ntp766\n Rp767\n (dp768\n g21\n g23\n sg26\n-Vbin/libtbx.list_modules\n+Vbin/libtbx.show_module_dependencies\n p769\n sbg0\n (g17\n g2\n Ntp770\n Rp771\n (dp772\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/libtbx/command_line/list_modules.py\n+Vlib/python3/dist-packages/libtbx/command_line/show_module_dependencies.py\n p773\n sbsg0\n (g17\n g2\n Ntp774\n Rp775\n (dp776\n g21\n g23\n sg26\n-Vbin/libtbx.import_all_python\n+Vbin/libtbx.latex\n p777\n sbg0\n (g17\n g2\n Ntp778\n Rp779\n (dp780\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/libtbx/command_line/import_all_python.py\n+Vlib/python3/dist-packages/libtbx/command_line/latex.sh\n p781\n sbsg0\n (g17\n g2\n Ntp782\n Rp783\n (dp784\n g21\n g23\n sg26\n-Vbin/libtbx.py_compile_all\n+Vbin/libtbx.list_source_files_sorted_by_size\n p785\n sbg0\n (g17\n g2\n Ntp786\n Rp787\n (dp788\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/libtbx/command_line/py_compile_all.py\n+Vlib/python3/dist-packages/libtbx/command_line/list_source_files_sorted_by_size.py\n p789\n sbsg0\n (g17\n g2\n Ntp790\n Rp791\n (dp792\n g21\n g23\n sg26\n-Vbin/libtbx.easy_qsub\n+Vbin/libtbx.show_numpy_version\n p793\n sbg0\n (g17\n g2\n Ntp794\n Rp795\n (dp796\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/libtbx/command_line/easy_qsub.py\n+Vlib/python3/dist-packages/libtbx/command_line/show_numpy_version.py\n p797\n sbsg0\n (g17\n g2\n Ntp798\n Rp799\n (dp800\n g21\n g23\n sg26\n-Vbin/libtbx.start_process\n+Vbin/libtbx.phil\n p801\n sbg0\n (g17\n g2\n Ntp802\n Rp803\n (dp804\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/libtbx/command_line/start_process.py\n+Vlib/python3/dist-packages/libtbx/command_line/phil.py\n p805\n sbsg0\n (g17\n g2\n Ntp806\n Rp807\n (dp808\n g21\n g23\n sg26\n-Vbin/libtbx.create_unzipsfx\n+Vbin/libtbx.resource_monitor_plot\n p809\n sbg0\n (g17\n g2\n Ntp810\n Rp811\n (dp812\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/libtbx/command_line/create_unzipsfx.py\n+Vlib/python3/dist-packages/libtbx/command_line/resource_monitor_plot.py\n p813\n sbsg0\n (g17\n g2\n Ntp814\n Rp815\n (dp816\n g21\n g23\n sg26\n-Vbin/libtbx.any2unix\n+Vbin/libtbx.find_under_build\n p817\n sbg0\n (g17\n g2\n Ntp818\n Rp819\n (dp820\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/libtbx/command_line/any2unix.py\n+Vlib/python3/dist-packages/libtbx/command_line/find_under_build.py\n p821\n sbsg0\n (g17\n g2\n Ntp822\n Rp823\n (dp824\n g21\n g23\n sg26\n-Vbin/libtbx.list_files\n+Vbin/libtbx.show_host_and_user\n p825\n sbg0\n (g17\n g2\n Ntp826\n Rp827\n (dp828\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/libtbx/command_line/list_files.py\n+Vlib/python3/dist-packages/libtbx/command_line/show_host_and_user.py\n p829\n sbsg0\n (g17\n g2\n Ntp830\n Rp831\n (dp832\n g21\n g23\n sg26\n-Vbin/libtbx.show_pythonpath\n+Vbin/libtbx.sge_qstat_counts\n p833\n sbg0\n (g17\n g2\n Ntp834\n Rp835\n (dp836\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/libtbx/command_line/show_pythonpath.py\n+Vlib/python3/dist-packages/libtbx/command_line/sge_qstat_counts.py\n p837\n sbsg0\n (g17\n g2\n Ntp838\n Rp839\n (dp840\n g21\n g23\n sg26\n-Vbin/libtbx.show_tests\n+Vbin/libtbx.show_but_no_repr\n p841\n sbg0\n (g17\n g2\n Ntp842\n Rp843\n (dp844\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/libtbx/command_line/show_tests.py\n+Vlib/python3/dist-packages/libtbx/command_line/show_but_no_repr.py\n p845\n sbsg0\n (g17\n g2\n Ntp846\n Rp847\n (dp848\n g21\n g23\n sg26\n-Vbin/libtbx.find_files\n+Vbin/libtbx.run_pickled_function\n p849\n sbg0\n (g17\n g2\n Ntp850\n Rp851\n (dp852\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/libtbx/command_line/find_files.py\n+Vlib/python3/dist-packages/libtbx/command_line/run_pickled_function.py\n p853\n sbsg0\n (g17\n g2\n Ntp854\n Rp855\n (dp856\n g21\n g23\n sg26\n-Vbin/libtbx.dtrace\n+Vbin/libtbx.bibtex\n p857\n sbg0\n (g17\n g2\n Ntp858\n Rp859\n (dp860\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/libtbx/command_line/dtrace.py\n+Vlib/python3/dist-packages/libtbx/command_line/bibtex.sh\n p861\n sbsg0\n (g17\n g2\n Ntp862\n Rp863\n (dp864\n g21\n g23\n sg26\n-Vbin/libtbx.show_but_no_repr\n+Vbin/libtbx.make_sphinx_html\n p865\n sbg0\n (g17\n g2\n Ntp866\n Rp867\n (dp868\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/libtbx/command_line/show_but_no_repr.py\n+Vlib/python3/dist-packages/libtbx/command_line/make_sphinx_html.py\n p869\n sbsg0\n (g17\n g2\n Ntp870\n Rp871\n (dp872\n g21\n g23\n sg26\n-Vbin/libtbx.parallel_simple\n+Vbin/libtbx.assert_line_count\n p873\n sbg0\n (g17\n g2\n Ntp874\n Rp875\n (dp876\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/libtbx/command_line/parallel_simple.py\n+Vlib/python3/dist-packages/libtbx/command_line/assert_line_count.py\n p877\n sbsg0\n (g17\n g2\n Ntp878\n Rp879\n (dp880\n g21\n g23\n sg26\n-Vbin/libtbx.show_python_sys_executable\n+Vbin/libtbx.raise_exception_for_testing\n p881\n sbg0\n (g17\n g2\n Ntp882\n Rp883\n (dp884\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/libtbx/command_line/show_python_sys_executable.py\n+Vlib/python3/dist-packages/libtbx/command_line/raise_exception_for_testing.py\n p885\n sbsg0\n (g17\n g2\n Ntp886\n Rp887\n (dp888\n g21\n g23\n sg26\n-Vbin/libtbx.create_selfx\n+Vbin/libtbx.show_numeric_version\n p889\n sbg0\n (g17\n g2\n Ntp890\n Rp891\n (dp892\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/libtbx/command_line/create_selfx.py\n+Vlib/python3/dist-packages/libtbx/command_line/show_numeric_version.py\n p893\n sbsg0\n (g17\n g2\n Ntp894\n Rp895\n (dp896\n g21\n g23\n sg26\n-Vbin/libtbx.show_numpy_version\n+Vbin/libtbx.show_python_sys_executable\n p897\n sbg0\n (g17\n g2\n Ntp898\n Rp899\n (dp900\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/libtbx/command_line/show_numpy_version.py\n+Vlib/python3/dist-packages/libtbx/command_line/show_python_sys_executable.py\n p901\n sbsg0\n (g17\n g2\n Ntp902\n Rp903\n (dp904\n g21\n g23\n sg26\n-Vbin/libtbx.find_pdb_mmcif_problems\n+Vbin/libtbx.show_full_command_path\n p905\n sbg0\n (g17\n g2\n Ntp906\n Rp907\n (dp908\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/libtbx/command_line/find_pdb_mmcif_problems.py\n+Vlib/python3/dist-packages/libtbx/command_line/show_full_command_path.py\n p909\n sbsg0\n (g17\n g2\n Ntp910\n Rp911\n (dp912\n g21\n g23\n sg26\n-Vbin/libtbx.find_untested\n+Vbin/libtbx.bundle_as_selfx\n p913\n sbg0\n (g17\n g2\n Ntp914\n Rp915\n (dp916\n g21\n g23\n 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sg26\n-Vlib/python3/dist-packages/libtbx/command_line/configure.sh\n+Vlib/python3/dist-packages/libtbx/command_line/make_dist.py\n p989\n sbsg0\n (g17\n g2\n Ntp990\n Rp991\n (dp992\n g21\n g23\n sg26\n-Vbin/libtbx.find_unused_imports_crude\n+Vbin/libtbx.seconds_since_the_epoch\n p993\n sbg0\n (g17\n g2\n Ntp994\n Rp995\n (dp996\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/libtbx/command_line/find_unused_imports_crude.py\n+Vlib/python3/dist-packages/libtbx/command_line/seconds_since_the_epoch.py\n p997\n sbsg0\n (g17\n g2\n Ntp998\n Rp999\n (dp1000\n g21\n g23\n sg26\n-Vbin/libtbx.add_from_future_import_division\n+Vbin/libtbx.create_installer\n p1001\n sbg0\n (g17\n g2\n Ntp1002\n Rp1003\n (dp1004\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/libtbx/command_line/add_from_future_import_division.py\n+Vlib/python3/dist-packages/libtbx/command_line/create_installer.py\n p1005\n sbsg0\n (g17\n g2\n Ntp1006\n Rp1007\n (dp1008\n g21\n g23\n sg26\n-Vbin/libtbx.install\n+Vbin/libtbx.nequal\n p1009\n sbg0\n (g17\n g2\n Ntp1010\n Rp1011\n (dp1012\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/libtbx/command_line/install.py\n+Vlib/python3/dist-packages/libtbx/command_line/nequal.py\n p1013\n sbsg0\n (g17\n g2\n Ntp1014\n Rp1015\n (dp1016\n g21\n g23\n sg26\n-Vbin/libtbx.remote_processing\n+Vbin/libtbx.find_unused_imports_crude\n p1017\n sbg0\n (g17\n g2\n Ntp1018\n Rp1019\n (dp1020\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/libtbx/command_line/remote_processing.py\n+Vlib/python3/dist-packages/libtbx/command_line/find_unused_imports_crude.py\n p1021\n sbsg0\n (g17\n g2\n Ntp1022\n Rp1023\n (dp1024\n g21\n g23\n sg26\n-Vbin/libtbx.find_clutter\n+Vbin/libtbx.chunk\n p1025\n sbg0\n (g17\n g2\n Ntp1026\n Rp1027\n (dp1028\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/libtbx/command_line/find_clutter.py\n+Vlib/python3/dist-packages/libtbx/command_line/chunk.py\n p1029\n sbsg0\n (g17\n g2\n Ntp1030\n Rp1031\n (dp1032\n g21\n g23\n sg26\n-Vbin/libtbx.show_repository_paths\n+Vbin/libtbx.exec\n p1033\n sbg0\n (g17\n g2\n Ntp1034\n Rp1035\n (dp1036\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/libtbx/command_line/show_repository_paths.py\n+Vlib/python3/dist-packages/libtbx/command_line/exec.sh\n p1037\n sbsg0\n (g17\n g2\n Ntp1038\n Rp1039\n (dp1040\n g21\n g23\n sg26\n-Vbin/libtbx.show_number_of_processors\n+Vbin/libtbx.refresh\n p1041\n sbg0\n (g17\n g2\n Ntp1042\n Rp1043\n (dp1044\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/libtbx/command_line/show_number_of_processors.py\n+Vlib/python3/dist-packages/libtbx/command_line/refresh.sh\n p1045\n sbsg0\n (g17\n g2\n Ntp1046\n Rp1047\n (dp1048\n g21\n g23\n sg26\n-Vbin/libtbx.scons\n+Vbin/libtbx.add_from_future_import_division\n p1049\n sbg0\n (g17\n g2\n Ntp1050\n Rp1051\n (dp1052\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/libtbx/command_line/scons.py\n+Vlib/python3/dist-packages/libtbx/command_line/add_from_future_import_division.py\n p1053\n sbsg0\n 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sg26\n-Vlib/python3/dist-packages/libtbx/command_line/valgrind.sh\n+Vlib/python3/dist-packages/libtbx/command_line/show_number_of_processors.py\n p1077\n sbsg0\n (g17\n g2\n Ntp1078\n Rp1079\n (dp1080\n g21\n g23\n sg26\n-Vbin/libtbx.prime_factors_of\n+Vbin/libtbx.unpack_in_sources\n p1081\n sbg0\n (g17\n g2\n Ntp1082\n Rp1083\n (dp1084\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/libtbx/command_line/prime_factors_of.py\n+Vlib/python3/dist-packages/libtbx/command_line/unpack_in_sources.csh\n p1085\n sbsg0\n (g17\n g2\n Ntp1086\n Rp1087\n (dp1088\n g21\n g23\n sg26\n-Vbin/libtbx.start_binary_bundle\n+Vbin/libtbx.find_old_style_classes\n p1089\n sbg0\n (g17\n g2\n Ntp1090\n Rp1091\n (dp1092\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/libtbx/command_line/start_binary_bundle.py\n+Vlib/python3/dist-packages/libtbx/command_line/find_old_style_classes.py\n p1093\n sbsg0\n (g17\n g2\n Ntp1094\n Rp1095\n (dp1096\n g21\n g23\n sg26\n-Vbin/libtbx.create_mac_app\n+Vbin/libtbx.assert_not_show_diff\n p1097\n sbg0\n (g17\n g2\n Ntp1098\n Rp1099\n (dp1100\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/libtbx/command_line/create_mac_app.py\n+Vlib/python3/dist-packages/libtbx/command_line/assert_not_show_diff.py\n p1101\n sbsg0\n (g17\n g2\n Ntp1102\n Rp1103\n (dp1104\n g21\n g23\n sg26\n-Vbin/libtbx.resource_monitor_plot\n+Vbin/libtbx.clear_paths\n p1105\n sbg0\n (g17\n g2\n Ntp1106\n Rp1107\n (dp1108\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/libtbx/command_line/resource_monitor_plot.py\n+Vlib/python3/dist-packages/libtbx/command_line/clear_paths.py\n p1109\n sbsg0\n (g17\n g2\n Ntp1110\n Rp1111\n (dp1112\n g21\n g23\n sg26\n-Vbin/libtbx.bootstrap\n+Vbin/libtbx.tcsh\n p1113\n sbg0\n (g17\n g2\n Ntp1114\n Rp1115\n (dp1116\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/libtbx/command_line/bootstrap.py\n+Vlib/python3/dist-packages/libtbx/command_line/tcsh.sh\n p1117\n sbsg0\n (g17\n g2\n Ntp1118\n Rp1119\n (dp1120\n g21\n g23\n sg26\n-Vbin/libtbx.show_env\n+Vbin/libtbx.show_dist_paths\n p1121\n sbg0\n (g17\n g2\n Ntp1122\n Rp1123\n (dp1124\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/libtbx/command_line/show_env.py\n+Vlib/python3/dist-packages/libtbx/command_line/show_dist_paths.py\n p1125\n sbsg0\n (g17\n g2\n Ntp1126\n Rp1127\n (dp1128\n g21\n g23\n sg26\n-Vbin/libtbx.find_in_repositories\n+Vbin/libtbx.find_pdb_mmcif_problems\n p1129\n sbg0\n (g17\n g2\n Ntp1130\n Rp1131\n (dp1132\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/libtbx/command_line/find_in_repositories.py\n+Vlib/python3/dist-packages/libtbx/command_line/find_pdb_mmcif_problems.py\n p1133\n sbsg0\n (g17\n g2\n Ntp1134\n Rp1135\n (dp1136\n g21\n g23\n sg26\n-Vbin/sphinx.build\n+Vbin/libtbx.show_include_paths\n p1137\n sbg0\n (g17\n g2\n Ntp1138\n Rp1139\n (dp1140\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/libtbx/command_line/sphinx_build.py\n+Vlib/python3/dist-packages/libtbx/command_line/show_include_paths.py\n p1141\n sbsg0\n (g17\n g2\n Ntp1142\n Rp1143\n (dp1144\n g21\n g23\n sg26\n-Vbin/libtbx.import_all_ext\n+Vbin/libtbx.valgrind\n p1145\n sbg0\n (g17\n g2\n Ntp1146\n Rp1147\n (dp1148\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/libtbx/command_line/import_all_ext.py\n+Vlib/python3/dist-packages/libtbx/command_line/valgrind.sh\n p1149\n sbsg0\n (g17\n g2\n Ntp1150\n Rp1151\n (dp1152\n g21\n g23\n sg26\n-Vbin/libtbx.show_environ_usage\n+Vbin/libtbx.printenv\n p1153\n sbg0\n (g17\n g2\n Ntp1154\n Rp1155\n (dp1156\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/libtbx/command_line/show_environ_usage.py\n+Vlib/python3/dist-packages/libtbx/command_line/printenv.py\n p1157\n sbsg0\n (g17\n g2\n Ntp1158\n Rp1159\n (dp1160\n g21\n g23\n sg26\n-Vbin/libtbx.printenv\n+Vbin/libtbx.start_process\n p1161\n sbg0\n (g17\n g2\n Ntp1162\n Rp1163\n (dp1164\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/libtbx/command_line/printenv.py\n+Vlib/python3/dist-packages/libtbx/command_line/start_process.py\n p1165\n sbsg0\n (g17\n g2\n Ntp1166\n Rp1167\n (dp1168\n g21\n g23\n sg26\n-Vbin/libtbx.bash\n+Vbin/libtbx.sge_available_slots\n p1169\n sbg0\n (g17\n g2\n Ntp1170\n Rp1171\n (dp1172\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/libtbx/command_line/bash.sh\n+Vlib/python3/dist-packages/libtbx/command_line/sge_available_slots.py\n p1173\n sbsg0\n (g17\n g2\n Ntp1174\n Rp1175\n (dp1176\n g21\n g23\n sg26\n-Vbin/libtbx.assert_not_show_diff\n+Vbin/libtbx.create_unzipsfx\n p1177\n sbg0\n (g17\n g2\n Ntp1178\n Rp1179\n (dp1180\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/libtbx/command_line/assert_not_show_diff.py\n+Vlib/python3/dist-packages/libtbx/command_line/create_unzipsfx.py\n p1181\n sbsg0\n (g17\n g2\n Ntp1182\n Rp1183\n (dp1184\n g21\n g23\n sg26\n-Vbin/libtbx.show_build_options\n+Vbin/libtbx.show_commands\n p1185\n sbg0\n (g17\n g2\n Ntp1186\n Rp1187\n (dp1188\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/libtbx/command_line/show_build_options.py\n+Vlib/python3/dist-packages/libtbx/command_line/show_commands.py\n p1189\n sbsg0\n (g17\n g2\n Ntp1190\n Rp1191\n (dp1192\n g21\n g23\n sg26\n-Vbin/libtbx.extract_code_from_txt\n+Vbin/libtbx.show_repository_paths\n p1193\n sbg0\n (g17\n g2\n Ntp1194\n Rp1195\n (dp1196\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/libtbx/command_line/extract_code_from_txt.py\n+Vlib/python3/dist-packages/libtbx/command_line/show_repository_paths.py\n p1197\n sbsg0\n (g17\n g2\n Ntp1198\n Rp1199\n (dp1200\n g21\n g23\n sg26\n-Vbin/libtbx.show_variable_names\n+Vbin/libtbx.show_build_path\n p1201\n sbg0\n (g17\n g2\n Ntp1202\n Rp1203\n (dp1204\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/libtbx/command_line/show_variable_names.py\n+Vlib/python3/dist-packages/libtbx/command_line/show_build_path.py\n p1205\n sbsg0\n (g17\n g2\n Ntp1206\n Rp1207\n (dp1208\n g21\n g23\n sg26\n-Vbin/libtbx.run_tests_parallel\n+Vbin/libtbx.create_cctbx_bundle_for_installer\n p1209\n sbg0\n (g17\n g2\n Ntp1210\n Rp1211\n (dp1212\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/libtbx/command_line/run_tests_parallel.py\n+Vlib/python3/dist-packages/libtbx/command_line/create_cctbx_bundle_for_installer.py\n p1213\n sbsg0\n (g17\n g2\n Ntp1214\n Rp1215\n (dp1216\n g21\n g23\n sg26\n-Vbin/libtbx.find_unused_imports\n+Vbin/libtbx.gdb\n p1217\n sbg0\n (g17\n g2\n Ntp1218\n Rp1219\n (dp1220\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/libtbx/command_line/find_unused_imports.py\n+Vlib/python3/dist-packages/libtbx/command_line/gdb.sh\n p1221\n sbsg0\n (g17\n g2\n Ntp1222\n Rp1223\n (dp1224\n g21\n g23\n sg26\n-Vbin/libtbx.bundle_as_exe\n+Vbin/libtbx.py_compile_all\n p1225\n sbg0\n (g17\n g2\n Ntp1226\n Rp1227\n (dp1228\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/libtbx/command_line/bundle_as_exe.py\n+Vlib/python3/dist-packages/libtbx/command_line/py_compile_all.py\n p1229\n sbsg0\n (g17\n g2\n Ntp1230\n Rp1231\n (dp1232\n g21\n g23\n sg26\n-Vbin/libtbx.clean_clutter\n+Vbin/libtbx.find_untested\n p1233\n sbg0\n (g17\n g2\n Ntp1234\n Rp1235\n (dp1236\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/libtbx/command_line/clean_clutter.py\n+Vlib/python3/dist-packages/libtbx/command_line/find_untested.py\n p1237\n sbsg0\n (g17\n g2\n Ntp1238\n Rp1239\n (dp1240\n g21\n g23\n sg26\n-Vbin/libtbx.wait_for_file\n+Vbin/libtbx.install\n p1241\n sbg0\n (g17\n g2\n Ntp1242\n Rp1243\n (dp1244\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/libtbx/command_line/wait_for_file.py\n+Vlib/python3/dist-packages/libtbx/command_line/install.py\n p1245\n sbsg0\n (g17\n g2\n Ntp1246\n Rp1247\n (dp1248\n g21\n g23\n sg26\n-Vbin/libtbx.gdb\n+Vbin/libtbx.configure\n p1249\n sbg0\n (g17\n g2\n Ntp1250\n Rp1251\n (dp1252\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/libtbx/command_line/gdb.sh\n+Vlib/python3/dist-packages/libtbx/command_line/configure.sh\n p1253\n sbsg0\n (g17\n g2\n Ntp1254\n Rp1255\n (dp1256\n g21\n g23\n sg26\n-Vbin/libtbx.install_conda\n+Vbin/libtbx.show_all_on_path\n p1257\n sbg0\n (g17\n g2\n Ntp1258\n Rp1259\n (dp1260\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/libtbx/command_line/install_conda.py\n+Vlib/python3/dist-packages/libtbx/command_line/show_all_on_path.py\n p1261\n sbsg0\n (g17\n g2\n Ntp1262\n Rp1263\n (dp1264\n g21\n g23\n sg26\n-Vbin/libtbx.epydoc_run\n+Vbin/libtbx.check_libcpp\n p1265\n sbg0\n (g17\n g2\n Ntp1266\n Rp1267\n (dp1268\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/libtbx/command_line/epydoc_run.py\n+Vlib/python3/dist-packages/libtbx/command_line/check_libcpp.py\n p1269\n sbsg0\n (g17\n g2\n Ntp1270\n Rp1271\n (dp1272\n g21\n g23\n sg26\n-Vbin/libtbx.assert_stdin_contains_strings\n+Vbin/libtbx.remove_tree\n p1273\n sbg0\n (g17\n g2\n Ntp1274\n Rp1275\n (dp1276\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/libtbx/command_line/assert_stdin_contains_strings.py\n+Vlib/python3/dist-packages/libtbx/command_line/remove_tree.py\n p1277\n sbsg0\n (g17\n g2\n Ntp1278\n Rp1279\n (dp1280\n g21\n g23\n sg26\n-Vbin/libtbx.assert_stdin_does_not_contain_strings\n+Vbin/libtbx.show_python_dependencies\n p1281\n sbg0\n (g17\n g2\n Ntp1282\n Rp1283\n (dp1284\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/libtbx/command_line/assert_stdin_contains_strings.py\n+Vlib/python3/dist-packages/libtbx/command_line/show_python_dependencies.py\n p1285\n sbsg0\n (g17\n g2\n Ntp1286\n Rp1287\n (dp1288\n g21\n g23\n sg26\n-Vbin/libtbx.show_commands\n+Vbin/libtbx.create_install_script_bat\n p1289\n sbg0\n (g17\n g2\n Ntp1290\n Rp1291\n (dp1292\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/libtbx/command_line/show_commands.py\n+Vlib/python3/dist-packages/libtbx/command_line/create_install_script_bat.py\n p1293\n sbsg0\n (g17\n g2\n Ntp1294\n Rp1295\n (dp1296\n g21\n g23\n sg26\n-Vbin/libtbx.seconds_since_the_epoch\n+Vbin/libtbx.bash\n p1297\n sbg0\n (g17\n g2\n Ntp1298\n Rp1299\n (dp1300\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/libtbx/command_line/seconds_since_the_epoch.py\n+Vlib/python3/dist-packages/libtbx/command_line/bash.sh\n p1301\n sbsg0\n (g17\n g2\n Ntp1302\n Rp1303\n (dp1304\n g21\n g23\n sg26\n-Vbin/libtbx.bibtex\n+Vbin/libtbx.create_mac_app\n p1305\n sbg0\n (g17\n g2\n Ntp1306\n Rp1307\n (dp1308\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/libtbx/command_line/bibtex.sh\n+Vlib/python3/dist-packages/libtbx/command_line/create_mac_app.py\n p1309\n sbsg0\n (g17\n g2\n Ntp1310\n Rp1311\n (dp1312\n g21\n g23\n sg26\n-Vbin/libtbx.git_avoid_merges\n+Vbin/libtbx.wait_for_file\n p1313\n sbg0\n (g17\n g2\n Ntp1314\n Rp1315\n (dp1316\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/libtbx/command_line/git_avoid_merges.py\n+Vlib/python3/dist-packages/libtbx/command_line/wait_for_file.py\n p1317\n sbsg0\n (g17\n g2\n Ntp1318\n Rp1319\n (dp1320\n g21\n g23\n sg26\n-Vbin/libtbx.clear_paths\n+Vbin/libtbx.import_all_ext\n p1321\n sbg0\n (g17\n g2\n Ntp1322\n Rp1323\n (dp1324\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/libtbx/command_line/clear_paths.py\n+Vlib/python3/dist-packages/libtbx/command_line/import_all_ext.py\n p1325\n sbsg0\n (g17\n g2\n Ntp1326\n Rp1327\n (dp1328\n g21\n g23\n sg26\n-Vbin/libtbx.list_source_files_sorted_by_size\n+Vbin/libtbx.remove_unused_imports\n p1329\n sbg0\n (g17\n g2\n Ntp1330\n Rp1331\n (dp1332\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/libtbx/command_line/list_source_files_sorted_by_size.py\n+Vlib/python3/dist-packages/libtbx/command_line/remove_unused_imports.py\n p1333\n sbsg0\n (g17\n g2\n Ntp1334\n Rp1335\n (dp1336\n g21\n g23\n sg26\n-Vbin/libtbx.create_windows_exe\n+Vbin/libtbx.find_clutter\n p1337\n sbg0\n (g17\n g2\n Ntp1338\n Rp1339\n (dp1340\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/libtbx/command_line/create_windows_exe.py\n+Vlib/python3/dist-packages/libtbx/command_line/find_clutter.py\n p1341\n sbsg0\n (g17\n g2\n Ntp1342\n Rp1343\n (dp1344\n g21\n g23\n sg26\n-Vbin/libtbx.line_count\n+Vbin/libtbx.path_utility\n p1345\n sbg0\n (g17\n g2\n Ntp1346\n Rp1347\n (dp1348\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/libtbx/command_line/line_count.py\n+Vlib/python3/dist-packages/libtbx/command_line/path_utility.py\n p1349\n sbsg0\n (g17\n g2\n Ntp1350\n Rp1351\n (dp1352\n g21\n g23\n sg26\n-Vbin/libtbx.show_build_path\n+Vbin/libtbx.git_avoid_merges\n p1353\n sbg0\n (g17\n g2\n Ntp1354\n Rp1355\n (dp1356\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/libtbx/command_line/show_build_path.py\n+Vlib/python3/dist-packages/libtbx/command_line/git_avoid_merges.py\n p1357\n sbsg0\n (g17\n g2\n Ntp1358\n Rp1359\n (dp1360\n g21\n g23\n sg26\n-Vbin/libtbx.exec\n+Vbin/libtbx.bootstrap\n p1361\n sbg0\n (g17\n g2\n Ntp1362\n Rp1363\n (dp1364\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/libtbx/command_line/exec.sh\n+Vlib/python3/dist-packages/libtbx/command_line/bootstrap.py\n p1365\n sbsg0\n (g17\n g2\n Ntp1366\n Rp1367\n (dp1368\n g21\n g23\n sg26\n-Vbin/libtbx.show_include_paths\n+Vbin/libtbx.pdflatex\n p1369\n sbg0\n (g17\n g2\n Ntp1370\n Rp1371\n (dp1372\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/libtbx/command_line/show_include_paths.py\n+Vlib/python3/dist-packages/libtbx/command_line/pdflatex.sh\n p1373\n sbsg0\n (g17\n g2\n Ntp1374\n Rp1375\n (dp1376\n g21\n g23\n sg26\n-Vbin/libtbx.analyse_code_comments\n+Vbin/libtbx.clean_clutter\n p1377\n sbg0\n (g17\n g2\n Ntp1378\n Rp1379\n (dp1380\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/libtbx/command_line/analyse_code_comments.py\n+Vlib/python3/dist-packages/libtbx/command_line/clean_clutter.py\n p1381\n sbsg0\n (g17\n g2\n Ntp1382\n Rp1383\n (dp1384\n g21\n g23\n sg26\n-Vbin/libtbx.assert_line_count\n+Vbin/libtbx.create_windows_exe\n p1385\n sbg0\n (g17\n g2\n Ntp1386\n Rp1387\n (dp1388\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/libtbx/command_line/assert_line_count.py\n+Vlib/python3/dist-packages/libtbx/command_line/create_windows_exe.py\n p1389\n sbsg0\n (g17\n g2\n Ntp1390\n Rp1391\n (dp1392\n g21\n g23\n sg26\n-Vbin/libtbx.show_bin_path\n+Vbin/libtbx.analyse_code_comments\n p1393\n sbg0\n (g17\n g2\n Ntp1394\n Rp1395\n (dp1396\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/libtbx/command_line/show_bin_path.py\n+Vlib/python3/dist-packages/libtbx/command_line/analyse_code_comments.py\n p1397\n sbsg0\n (g17\n g2\n Ntp1398\n Rp1399\n (dp1400\n g21\n g23\n sg26\n-Vbin/libtbx.remove_tree\n+Vbin/libtbx.create_selfx\n p1401\n sbg0\n (g17\n g2\n Ntp1402\n Rp1403\n (dp1404\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/libtbx/command_line/remove_tree.py\n+Vlib/python3/dist-packages/libtbx/command_line/create_selfx.py\n p1405\n sbsg0\n (g17\n g2\n Ntp1406\n Rp1407\n (dp1408\n g21\n g23\n sg26\n-Vbin/libtbx.create_installer\n+Vbin/libtbx.assert_stdin\n p1409\n sbg0\n (g17\n g2\n Ntp1410\n Rp1411\n (dp1412\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/libtbx/command_line/create_installer.py\n+Vlib/python3/dist-packages/libtbx/command_line/assert_stdin.py\n p1413\n sbsg0\n (g17\n g2\n Ntp1414\n Rp1415\n (dp1416\n g21\n g23\n sg26\n-Vbin/libtbx.csh\n+Vbin/libtbx.show_env\n p1417\n sbg0\n (g17\n g2\n Ntp1418\n Rp1419\n (dp1420\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/libtbx/command_line/csh.sh\n+Vlib/python3/dist-packages/libtbx/command_line/show_env.py\n p1421\n sbsg0\n (g17\n g2\n Ntp1422\n Rp1423\n (dp1424\n g21\n g23\n sg26\n-Vbin/libtbx.bundle_as_selfx\n+Vbin/libtbx.assert_stdin_contains_strings\n p1425\n sbg0\n (g17\n g2\n Ntp1426\n Rp1427\n (dp1428\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/libtbx/command_line/bundle_as_selfx.csh\n+Vlib/python3/dist-packages/libtbx/command_line/assert_stdin_contains_strings.py\n p1429\n sbsg0\n (g17\n g2\n Ntp1430\n Rp1431\n (dp1432\n g21\n g23\n sg26\n-Vbin/libtbx.show_lib_path\n+Vbin/libtbx.assert_stdin_does_not_contain_strings\n p1433\n sbg0\n (g17\n g2\n Ntp1434\n Rp1435\n (dp1436\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/libtbx/command_line/show_lib_path.py\n+Vlib/python3/dist-packages/libtbx/command_line/assert_stdin_contains_strings.py\n p1437\n sbsg0\n (g17\n g2\n Ntp1438\n Rp1439\n (dp1440\n g21\n g23\n sg26\n-Vbin/libtbx.show_full_command_path\n+Vbin/libtbx.assert_stdin_ends_with\n p1441\n sbg0\n (g17\n g2\n Ntp1442\n Rp1443\n (dp1444\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/libtbx/command_line/show_full_command_path.py\n+Vlib/python3/dist-packages/libtbx/command_line/assert_stdin_ends_with.py\n p1445\n sbsg0\n (g17\n g2\n Ntp1446\n Rp1447\n (dp1448\n g21\n g23\n sg26\n-Vbin/libtbx.nequal\n+Vbin/libtbx.install_conda\n p1449\n sbg0\n (g17\n g2\n Ntp1450\n Rp1451\n (dp1452\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/libtbx/command_line/nequal.py\n+Vlib/python3/dist-packages/libtbx/command_line/install_conda.py\n p1453\n sbsg0\n (g17\n g2\n Ntp1454\n Rp1455\n (dp1456\n g21\n g23\n sg26\n-Vbin/libtbx.show_numeric_version\n+Vbin/libtbx.find_in_repositories\n p1457\n sbg0\n (g17\n g2\n Ntp1458\n Rp1459\n (dp1460\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/libtbx/command_line/show_numeric_version.py\n+Vlib/python3/dist-packages/libtbx/command_line/find_in_repositories.py\n p1461\n sbsg0\n (g17\n g2\n Ntp1462\n Rp1463\n (dp1464\n g21\n g23\n sg26\n-Vbin/libtbx.find_under_build\n+Vbin/libtbx.line_count\n p1465\n sbg0\n (g17\n g2\n Ntp1466\n Rp1467\n (dp1468\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/libtbx/command_line/find_under_build.py\n+Vlib/python3/dist-packages/libtbx/command_line/line_count.py\n p1469\n sbsg0\n (g17\n g2\n Ntp1470\n Rp1471\n (dp1472\n g21\n g23\n sg26\n-Vbin/libtbx.show_python_dependencies\n+Vbin/libtbx.show_variable_names\n p1473\n sbg0\n (g17\n g2\n Ntp1474\n Rp1475\n (dp1476\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/libtbx/command_line/show_python_dependencies.py\n+Vlib/python3/dist-packages/libtbx/command_line/show_variable_names.py\n p1477\n sbsg0\n (g17\n g2\n Ntp1478\n Rp1479\n (dp1480\n g21\n g23\n sg26\n-Vbin/libtbx.find_reserved_names\n+Vbin/libtbx.help\n p1481\n sbg0\n (g17\n g2\n Ntp1482\n Rp1483\n (dp1484\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/libtbx/command_line/find_reserved_names.py\n+Vlib/python3/dist-packages/libtbx/command_line/help.py\n p1485\n sbsg0\n (g17\n g2\n Ntp1486\n Rp1487\n (dp1488\n g21\n g23\n sg26\n-Vbin/libtbx.unpack_in_sources\n+Vbin/libtbx.remote_processing\n p1489\n sbg0\n (g17\n g2\n Ntp1490\n Rp1491\n (dp1492\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/libtbx/command_line/unpack_in_sources.csh\n+Vlib/python3/dist-packages/libtbx/command_line/remote_processing.py\n p1493\n sbsg0\n (g17\n g2\n Ntp1494\n Rp1495\n (dp1496\n g21\n g23\n sg26\n-Vbin/libtbx.make_sphinx_html\n+Vbin/libtbx.find_reserved_names\n p1497\n sbg0\n (g17\n g2\n Ntp1498\n Rp1499\n (dp1500\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/libtbx/command_line/make_sphinx_html.py\n+Vlib/python3/dist-packages/libtbx/command_line/find_reserved_names.py\n p1501\n sbsg0\n (g17\n g2\n Ntp1502\n Rp1503\n (dp1504\n g21\n g23\n sg26\n-Vbin/libtbx.create_install_script_bat\n+Vbin/libtbx.show_pythonpath\n p1505\n sbg0\n (g17\n g2\n Ntp1506\n Rp1507\n (dp1508\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/libtbx/command_line/create_install_script_bat.py\n+Vlib/python3/dist-packages/libtbx/command_line/show_pythonpath.py\n p1509\n sbsg0\n (g17\n g2\n Ntp1510\n Rp1511\n (dp1512\n g21\n g23\n sg26\n-Vbin/libtbx.remove_unused_imports\n+Vbin/libtbx.show_build_options\n p1513\n sbg0\n (g17\n g2\n Ntp1514\n Rp1515\n (dp1516\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/libtbx/command_line/remove_unused_imports.py\n+Vlib/python3/dist-packages/libtbx/command_line/show_build_options.py\n p1517\n sbsg0\n (g17\n g2\n Ntp1518\n Rp1519\n (dp1520\n g21\n g23\n sg26\n-Vbin/libtbx.assert_stdin_ends_with\n+Vbin/libtbx.show_environ_usage\n p1521\n sbg0\n (g17\n g2\n Ntp1522\n Rp1523\n (dp1524\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/libtbx/command_line/assert_stdin_ends_with.py\n+Vlib/python3/dist-packages/libtbx/command_line/show_environ_usage.py\n p1525\n sbsg0\n (g17\n g2\n Ntp1526\n Rp1527\n (dp1528\n g21\n g23\n sg26\n-Vbin/libtbx.assert_stdin\n+Vbin/libtbx.import_all_python\n p1529\n sbg0\n (g17\n g2\n Ntp1530\n Rp1531\n (dp1532\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/libtbx/command_line/assert_stdin.py\n+Vlib/python3/dist-packages/libtbx/command_line/import_all_python.py\n p1533\n sbsg0\n (g17\n g2\n Ntp1534\n Rp1535\n (dp1536\n g21\n g23\n sg26\n-Vbin/libtbx.show_host_and_user\n+Vbin/libtbx.find_files\n p1537\n sbg0\n (g17\n g2\n Ntp1538\n Rp1539\n (dp1540\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/libtbx/command_line/show_host_and_user.py\n+Vlib/python3/dist-packages/libtbx/command_line/find_files.py\n p1541\n sbsg0\n (g17\n g2\n Ntp1542\n Rp1543\n (dp1544\n g21\n g23\n sg26\n-Vbin/libtbx.create_cctbx_bundle_for_installer\n+Vbin/libtbx.dtrace\n p1545\n sbg0\n (g17\n g2\n Ntp1546\n Rp1547\n (dp1548\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/libtbx/command_line/create_cctbx_bundle_for_installer.py\n+Vlib/python3/dist-packages/libtbx/command_line/dtrace.py\n p1549\n sbsg0\n (g17\n g2\n Ntp1550\n Rp1551\n (dp1552\n g21\n g23\n sg26\n-Vbin/libtbx.find_old_style_classes\n+Vbin/libtbx.list_files\n p1553\n sbg0\n (g17\n g2\n Ntp1554\n Rp1555\n (dp1556\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/libtbx/command_line/find_old_style_classes.py\n+Vlib/python3/dist-packages/libtbx/command_line/list_files.py\n p1557\n sbsg0\n (g17\n g2\n Ntp1558\n Rp1559\n (dp1560\n g21\n g23\n sg26\n-Vbin/libtbx.sh\n+Vbin/libtbx.show_lib_path\n p1561\n sbg0\n (g17\n g2\n Ntp1562\n Rp1563\n (dp1564\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/libtbx/command_line/sh.sh\n+Vlib/python3/dist-packages/libtbx/command_line/show_lib_path.py\n p1565\n sbsg0\n (g17\n g2\n Ntp1566\n Rp1567\n (dp1568\n g21\n g23\n sg26\n-Vbin/libtbx.tcsh\n+Vbin/libtbx.any2unix\n p1569\n sbg0\n (g17\n g2\n Ntp1570\n Rp1571\n (dp1572\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/libtbx/command_line/tcsh.sh\n+Vlib/python3/dist-packages/libtbx/command_line/any2unix.py\n p1573\n sbsg0\n (g17\n g2\n Ntp1574\n Rp1575\n (dp1576\n g21\n g23\n sg26\n-Vbin/libtbx.pdflatex\n+Vbin/libtbx.list_modules\n p1577\n sbg0\n (g17\n g2\n Ntp1578\n Rp1579\n (dp1580\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/libtbx/command_line/pdflatex.sh\n+Vlib/python3/dist-packages/libtbx/command_line/list_modules.py\n p1581\n sbsg0\n (g17\n g2\n Ntp1582\n Rp1583\n (dp1584\n g21\n g23\n sg26\n-Vbin/libtbx.help\n+Vbin/libtbx.parallel_simple\n p1585\n sbg0\n (g17\n g2\n Ntp1586\n Rp1587\n (dp1588\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/libtbx/command_line/help.py\n+Vlib/python3/dist-packages/libtbx/command_line/parallel_simple.py\n p1589\n sbsg0\n (g17\n g2\n Ntp1590\n Rp1591\n (dp1592\n g21\n g23\n sg26\n-Vbin/libtbx.show_dist_paths\n+Vbin/libtbx.sh\n p1593\n sbg0\n (g17\n g2\n Ntp1594\n Rp1595\n (dp1596\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/libtbx/command_line/show_dist_paths.py\n+Vlib/python3/dist-packages/libtbx/command_line/sh.sh\n p1597\n sbsg0\n (g17\n g2\n Ntp1598\n Rp1599\n (dp1600\n g21\n g23\n sg26\n-Vbin/libtbx.env_run\n+Vbin/libtbx.epydoc_run\n p1601\n sbg0\n (g17\n g2\n Ntp1602\n Rp1603\n (dp1604\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/libtbx/command_line/env_run.py\n+Vlib/python3/dist-packages/libtbx/command_line/epydoc_run.py\n p1605\n sbsg0\n (g17\n g2\n Ntp1606\n Rp1607\n (dp1608\n g21\n g23\n sg26\n-Vbin/libtbx.show_date_and_time\n+Vbin/libtbx.find_unused_imports\n p1609\n sbg0\n (g17\n g2\n Ntp1610\n Rp1611\n (dp1612\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/libtbx/command_line/show_date_and_time.py\n+Vlib/python3/dist-packages/libtbx/command_line/find_unused_imports.py\n p1613\n sbsg0\n (g17\n g2\n Ntp1614\n Rp1615\n (dp1616\n g21\n g23\n sg26\n-Vbin/boost_adaptbx.nested_cpp_loops_with_check_signals\n+Vbin/boost_adaptbx.int_overflow\n p1617\n sbg0\n (g17\n g2\n Ntp1618\n Rp1619\n (dp1620\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/boost_adaptbx/command_line/nested_cpp_loops_with_check_signals.py\n+Vlib/python3/dist-packages/boost_adaptbx/command_line/int_overflow.py\n p1621\n sbsg0\n (g17\n g2\n Ntp1622\n Rp1623\n (dp1624\n g21\n g23\n sg26\n-Vbin/boost.lcm\n+Vbin/boost_adaptbx.show_platform_info\n p1625\n sbg0\n (g17\n g2\n Ntp1626\n Rp1627\n (dp1628\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/boost_adaptbx/command_line/lcm.py\n+Vlib/python3/dist-packages/boost_adaptbx/command_line/show_platform_info.py\n p1629\n sbsg0\n (g17\n g2\n Ntp1630\n Rp1631\n (dp1632\n g21\n g23\n sg26\n-Vbin/boost_adaptbx.segmentation_fault\n+Vbin/boost_adaptbx.nested_cpp_loops_with_check_signals\n p1633\n sbg0\n (g17\n g2\n Ntp1634\n Rp1635\n (dp1636\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/boost_adaptbx/command_line/segmentation_fault.py\n+Vlib/python3/dist-packages/boost_adaptbx/command_line/nested_cpp_loops_with_check_signals.py\n p1637\n sbsg0\n (g17\n g2\n Ntp1638\n Rp1639\n (dp1640\n g21\n g23\n sg26\n-Vbin/boost.gcd\n+Vbin/boost_adaptbx.segmentation_fault\n p1641\n sbg0\n (g17\n g2\n Ntp1642\n Rp1643\n (dp1644\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/boost_adaptbx/command_line/gcd.py\n+Vlib/python3/dist-packages/boost_adaptbx/command_line/segmentation_fault.py\n p1645\n sbsg0\n (g17\n g2\n Ntp1646\n Rp1647\n (dp1648\n@@ -4431,378 +4431,378 @@\n g2\n Ntp1654\n Rp1655\n (dp1656\n g21\n g23\n sg26\n-Vbin/boost_adaptbx.divide_by_zero\n+Vbin/boost.lcm\n p1657\n sbg0\n (g17\n g2\n Ntp1658\n Rp1659\n (dp1660\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/boost_adaptbx/command_line/divide_by_zero.py\n+Vlib/python3/dist-packages/boost_adaptbx/command_line/lcm.py\n p1661\n sbsg0\n (g17\n g2\n Ntp1662\n Rp1663\n (dp1664\n g21\n g23\n sg26\n-Vbin/boost_adaptbx.show_environ_usage\n+Vbin/boost.gcd\n p1665\n sbg0\n (g17\n g2\n Ntp1666\n Rp1667\n (dp1668\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/boost_adaptbx/command_line/show_environ_usage.py\n+Vlib/python3/dist-packages/boost_adaptbx/command_line/gcd.py\n p1669\n sbsg0\n (g17\n g2\n Ntp1670\n Rp1671\n (dp1672\n g21\n g23\n sg26\n-Vbin/boost_adaptbx.show_platform_info\n+Vbin/boost_adaptbx.divide_by_zero\n p1673\n sbg0\n (g17\n g2\n Ntp1674\n Rp1675\n (dp1676\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/boost_adaptbx/command_line/show_platform_info.py\n+Vlib/python3/dist-packages/boost_adaptbx/command_line/divide_by_zero.py\n p1677\n sbsg0\n (g17\n g2\n Ntp1678\n Rp1679\n (dp1680\n g21\n g23\n sg26\n-Vbin/boost_adaptbx.int_overflow\n+Vbin/boost_adaptbx.double_overflow\n p1681\n sbg0\n (g17\n g2\n Ntp1682\n Rp1683\n (dp1684\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/boost_adaptbx/command_line/int_overflow.py\n+Vlib/python3/dist-packages/boost_adaptbx/command_line/double_overflow.py\n p1685\n sbsg0\n (g17\n g2\n Ntp1686\n Rp1687\n (dp1688\n g21\n g23\n sg26\n-Vbin/boost_adaptbx.double_overflow\n+Vbin/boost_adaptbx.show_environ_usage\n p1689\n sbg0\n (g17\n g2\n Ntp1690\n Rp1691\n (dp1692\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/boost_adaptbx/command_line/double_overflow.py\n+Vlib/python3/dist-packages/boost_adaptbx/command_line/show_environ_usage.py\n p1693\n sbsg0\n (g17\n g2\n Ntp1694\n Rp1695\n (dp1696\n g21\n g23\n sg26\n-Vbin/fable.read\n+Vbin/fable.split\n p1697\n sbg0\n (g17\n g2\n Ntp1698\n Rp1699\n (dp1700\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/fable/command_line/read.py\n+Vlib/python3/dist-packages/fable/command_line/split.py\n p1701\n sbsg0\n (g17\n g2\n Ntp1702\n Rp1703\n (dp1704\n g21\n g23\n sg26\n-Vbin/fable.insert_write_at_start_of_each_procedure\n+Vbin/fable.cout\n p1705\n sbg0\n (g17\n g2\n Ntp1706\n Rp1707\n (dp1708\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/fable/command_line/insert_write_at_start_of_each_procedure.py\n+Vlib/python3/dist-packages/fable/command_line/cout.py\n p1709\n sbsg0\n (g17\n g2\n Ntp1710\n Rp1711\n (dp1712\n g21\n g23\n sg26\n-Vbin/fable.cout\n+Vbin/fable.fem_include_search_paths\n p1713\n sbg0\n (g17\n g2\n Ntp1714\n Rp1715\n (dp1716\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/fable/command_line/cout.py\n+Vlib/python3/dist-packages/fable/command_line/fem_include_search_paths.py\n p1717\n sbsg0\n (g17\n g2\n Ntp1718\n Rp1719\n (dp1720\n g21\n g23\n sg26\n-Vbin/fable.fem_include_search_paths\n+Vbin/fable.show_calls\n p1721\n sbg0\n (g17\n g2\n Ntp1722\n Rp1723\n (dp1724\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/fable/command_line/fem_include_search_paths.py\n+Vlib/python3/dist-packages/fable/command_line/show_calls.py\n p1725\n sbsg0\n (g17\n g2\n Ntp1726\n Rp1727\n (dp1728\n g21\n g23\n sg26\n-Vbin/fable.split\n+Vbin/fable.insert_write_at_start_of_each_procedure\n p1729\n sbg0\n (g17\n g2\n Ntp1730\n Rp1731\n (dp1732\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/fable/command_line/split.py\n+Vlib/python3/dist-packages/fable/command_line/insert_write_at_start_of_each_procedure.py\n p1733\n sbsg0\n (g17\n g2\n Ntp1734\n Rp1735\n (dp1736\n g21\n g23\n sg26\n-Vbin/fable.show_calls\n+Vbin/fable.read\n p1737\n sbg0\n (g17\n g2\n Ntp1738\n Rp1739\n (dp1740\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/fable/command_line/show_calls.py\n+Vlib/python3/dist-packages/fable/command_line/read.py\n p1741\n sbsg0\n (g17\n g2\n Ntp1742\n Rp1743\n (dp1744\n g21\n g23\n sg26\n-Vbin/scitbx.histogram\n+Vbin/scitbx.generate_error_h\n p1745\n sbg0\n (g17\n g2\n Ntp1746\n Rp1747\n (dp1748\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/scitbx/command_line/histogram.py\n+Vlib/python3/dist-packages/scitbx/command_line/generate_error_h.py\n p1749\n sbsg0\n (g17\n g2\n Ntp1750\n Rp1751\n (dp1752\n g21\n g23\n sg26\n-Vbin/scitbx.apply_tapenade_hints\n+Vbin/scitbx.unicode_examples\n p1753\n sbg0\n (g17\n g2\n Ntp1754\n Rp1755\n (dp1756\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/scitbx/command_line/apply_tapenade_hints.py\n+Vlib/python3/dist-packages/scitbx/command_line/unicode_examples.py\n p1757\n sbsg0\n (g17\n g2\n Ntp1758\n Rp1759\n (dp1760\n g21\n g23\n sg26\n-Vbin/scitbx.show_exp_times\n+Vbin/scitbx.show_sizes\n p1761\n sbg0\n (g17\n g2\n Ntp1762\n Rp1763\n (dp1764\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/scitbx/command_line/show_exp_times.py\n+Vlib/python3/dist-packages/scitbx/command_line/show_sizes.py\n p1765\n sbsg0\n (g17\n g2\n Ntp1766\n Rp1767\n (dp1768\n g21\n g23\n sg26\n-Vbin/scitbx.generate_error_h\n+Vbin/scitbx.apply_tapenade_hints\n p1769\n sbg0\n (g17\n g2\n Ntp1770\n Rp1771\n (dp1772\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/scitbx/command_line/generate_error_h.py\n+Vlib/python3/dist-packages/scitbx/command_line/apply_tapenade_hints.py\n p1773\n sbsg0\n (g17\n g2\n Ntp1774\n Rp1775\n (dp1776\n g21\n g23\n sg26\n-Vbin/scitbx.show_sizes\n+Vbin/scitbx.show_exp_times\n p1777\n sbg0\n (g17\n g2\n Ntp1778\n Rp1779\n (dp1780\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/scitbx/command_line/show_sizes.py\n+Vlib/python3/dist-packages/scitbx/command_line/show_exp_times.py\n p1781\n sbsg0\n (g17\n g2\n Ntp1782\n Rp1783\n (dp1784\n g21\n g23\n sg26\n-Vbin/scitbx.unicode_examples\n+Vbin/scitbx.histogram\n p1785\n sbg0\n (g17\n g2\n Ntp1786\n Rp1787\n (dp1788\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/scitbx/command_line/unicode_examples.py\n+Vlib/python3/dist-packages/scitbx/command_line/histogram.py\n p1789\n sbsg0\n (g17\n g2\n Ntp1790\n Rp1791\n (dp1792\n@@ -4827,114 +4827,114 @@\n g2\n Ntp1798\n Rp1799\n (dp1800\n g21\n g23\n sg26\n-Vbin/cctbx.euclidean_model_matching\n+Vbin/phenix.diffuse\n p1801\n sbg0\n (g17\n g2\n Ntp1802\n Rp1803\n (dp1804\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/cctbx/command_line/euclidean_model_matching.py\n+Vlib/python3/dist-packages/cctbx/command_line/diffuse.py\n p1805\n sbsg0\n (g17\n g2\n Ntp1806\n Rp1807\n (dp1808\n g21\n g23\n sg26\n-Vbin/cctbx_regression.test_nightly\n+Vbin/cctbx.wavelength_units\n p1809\n sbg0\n (g17\n g2\n Ntp1810\n Rp1811\n (dp1812\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/cctbx/command_line/cctbx_test_nightly.py\n+Vlib/python3/dist-packages/cctbx/command_line/wavelength_units.py\n p1813\n sbsg0\n (g17\n g2\n Ntp1814\n Rp1815\n (dp1816\n g21\n g23\n sg26\n-Vbin/phenix.form_factor_query\n+Vbin/samosa.join\n p1817\n sbg0\n (g17\n g2\n Ntp1818\n Rp1819\n (dp1820\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/cctbx/command_line/form_factor_query.py\n+Vlib/python3/dist-packages/cctbx/command_line/samosa_join.py\n p1821\n sbsg0\n (g17\n g2\n Ntp1822\n Rp1823\n (dp1824\n g21\n g23\n sg26\n-Vbin/phenix.auto_sharpen\n+Vbin/cctbx.brehm_diederichs\n p1825\n sbg0\n (g17\n g2\n Ntp1826\n Rp1827\n (dp1828\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/cctbx/command_line/auto_sharpen.py\n+Vlib/python3/dist-packages/cctbx/command_line/brehm_diederichs.py\n p1829\n sbsg0\n (g17\n g2\n Ntp1830\n Rp1831\n (dp1832\n g21\n g23\n sg26\n-Vbin/cctbx.subgroups\n+Vbin/phenix.form_factor_query\n p1833\n sbg0\n (g17\n g2\n Ntp1834\n Rp1835\n (dp1836\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/cctbx/command_line/subgroups.py\n+Vlib/python3/dist-packages/cctbx/command_line/form_factor_query.py\n p1837\n sbsg0\n (g17\n g2\n Ntp1838\n Rp1839\n (dp1840\n@@ -4959,312 +4959,312 @@\n g2\n Ntp1846\n Rp1847\n (dp1848\n g21\n g23\n sg26\n-Vbin/phenix.segment_and_split_map\n+Vbin/cctbx_regression.test_nightly\n p1849\n sbg0\n (g17\n g2\n Ntp1850\n Rp1851\n (dp1852\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/cctbx/command_line/segment_and_split_map.py\n+Vlib/python3/dist-packages/cctbx/command_line/cctbx_test_nightly.py\n p1853\n sbsg0\n (g17\n g2\n Ntp1854\n Rp1855\n (dp1856\n g21\n g23\n sg26\n-Vbin/cctbx.brehm_diederichs\n+Vbin/cctbx.subgroups\n p1857\n sbg0\n (g17\n g2\n Ntp1858\n Rp1859\n (dp1860\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/cctbx/command_line/brehm_diederichs.py\n+Vlib/python3/dist-packages/cctbx/command_line/subgroups.py\n p1861\n sbsg0\n (g17\n g2\n Ntp1862\n Rp1863\n (dp1864\n g21\n g23\n sg26\n-Vbin/cctbx.version\n+Vbin/cctbx.eltbx.show_fp_fdp\n p1865\n sbg0\n (g17\n g2\n Ntp1866\n Rp1867\n (dp1868\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/cctbx/command_line/version.py\n+Vlib/python3/dist-packages/cctbx/command_line/eltbx.show_fp_fdp.py\n p1869\n sbsg0\n (g17\n g2\n Ntp1870\n Rp1871\n (dp1872\n g21\n g23\n sg26\n-Vbin/samosa.scale\n+Vbin/cctbx.version\n p1873\n sbg0\n (g17\n g2\n Ntp1874\n Rp1875\n (dp1876\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/cctbx/command_line/samosa_scale.py\n+Vlib/python3/dist-packages/cctbx/command_line/version.py\n p1877\n sbsg0\n (g17\n g2\n Ntp1878\n Rp1879\n (dp1880\n g21\n g23\n sg26\n-Vbin/cctbx.precession_view\n+Vbin/phenix.segment_and_split_map\n p1881\n sbg0\n (g17\n g2\n Ntp1882\n Rp1883\n (dp1884\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/cctbx/command_line/precession_view.py\n+Vlib/python3/dist-packages/cctbx/command_line/segment_and_split_map.py\n p1885\n sbsg0\n (g17\n g2\n Ntp1886\n Rp1887\n (dp1888\n g21\n g23\n sg26\n-Vbin/phenix.find_reticular_twin_laws\n+Vbin/cctbx.structure_factor_timings\n p1889\n sbg0\n (g17\n g2\n Ntp1890\n Rp1891\n (dp1892\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/cctbx/command_line/find_reticular_twin_laws.py\n+Vlib/python3/dist-packages/cctbx/command_line/structure_factor_timings.py\n p1893\n sbsg0\n (g17\n g2\n Ntp1894\n Rp1895\n (dp1896\n g21\n g23\n sg26\n-Vbin/cctbx.wavelength_units\n+Vbin/mmtbx.development.qscore\n p1897\n sbg0\n (g17\n g2\n Ntp1898\n Rp1899\n (dp1900\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/cctbx/command_line/wavelength_units.py\n+Vlib/python3/dist-packages/cctbx/command_line/qscore.py\n p1901\n sbsg0\n (g17\n g2\n Ntp1902\n Rp1903\n (dp1904\n g21\n g23\n sg26\n-Vbin/cctbx.eltbx.show_fp_fdp\n+Vbin/cctbx.web.install\n p1905\n sbg0\n (g17\n g2\n Ntp1906\n Rp1907\n (dp1908\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/cctbx/command_line/eltbx.show_fp_fdp.py\n+Vlib/python3/dist-packages/cctbx/command_line/web.install.csh\n p1909\n sbsg0\n (g17\n g2\n Ntp1910\n Rp1911\n (dp1912\n g21\n g23\n sg26\n-Vbin/phenix.diffuse\n+Vbin/cctbx.cod_select_and_pickle\n p1913\n sbg0\n (g17\n g2\n Ntp1914\n Rp1915\n (dp1916\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/cctbx/command_line/diffuse.py\n+Vlib/python3/dist-packages/cctbx/command_line/cod_select_and_pickle.py\n p1917\n sbsg0\n (g17\n g2\n Ntp1918\n Rp1919\n (dp1920\n g21\n g23\n sg26\n-Vbin/mmtbx.development.qscore\n+Vbin/phenix.find_reticular_twin_laws\n p1921\n sbg0\n (g17\n g2\n Ntp1922\n Rp1923\n (dp1924\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/cctbx/command_line/qscore.py\n+Vlib/python3/dist-packages/cctbx/command_line/find_reticular_twin_laws.py\n p1925\n sbsg0\n (g17\n g2\n Ntp1926\n Rp1927\n (dp1928\n g21\n g23\n sg26\n-Vbin/cctbx.structure_factor_timings\n+Vbin/samosa.scale\n p1929\n sbg0\n (g17\n g2\n Ntp1930\n Rp1931\n (dp1932\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/cctbx/command_line/structure_factor_timings.py\n+Vlib/python3/dist-packages/cctbx/command_line/samosa_scale.py\n p1933\n sbsg0\n (g17\n g2\n Ntp1934\n Rp1935\n (dp1936\n g21\n g23\n sg26\n-Vbin/samosa.join\n+Vbin/cctbx.euclidean_model_matching\n p1937\n sbg0\n (g17\n g2\n Ntp1938\n Rp1939\n (dp1940\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/cctbx/command_line/samosa_join.py\n+Vlib/python3/dist-packages/cctbx/command_line/euclidean_model_matching.py\n p1941\n sbsg0\n (g17\n g2\n Ntp1942\n Rp1943\n (dp1944\n g21\n g23\n sg26\n-Vbin/cctbx.cod_select_and_pickle\n+Vbin/phenix.auto_sharpen\n p1945\n sbg0\n (g17\n g2\n Ntp1946\n Rp1947\n (dp1948\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/cctbx/command_line/cod_select_and_pickle.py\n+Vlib/python3/dist-packages/cctbx/command_line/auto_sharpen.py\n p1949\n sbsg0\n (g17\n g2\n Ntp1950\n Rp1951\n (dp1952\n g21\n g23\n sg26\n-Vbin/cctbx.web.install\n+Vbin/cctbx.precession_view\n p1953\n sbg0\n (g17\n g2\n Ntp1954\n Rp1955\n (dp1956\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/cctbx/command_line/web.install.csh\n+Vlib/python3/dist-packages/cctbx/command_line/precession_view.py\n p1957\n sbsg0\n (g17\n g2\n Ntp1958\n Rp1959\n (dp1960\n@@ -5289,125 +5289,125 @@\n g2\n Ntp1966\n Rp1967\n (dp1968\n g21\n g23\n sg26\n-Vbin/cctbx.multiplicity_viewer\n+Vbin/cctbx.visualize_r_factors\n p1969\n sbg0\n (g17\n g2\n Ntp1970\n Rp1971\n (dp1972\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/crys3d/command_line/multiplicity_viewer.py\n+Vlib/python3/dist-packages/crys3d/command_line/visualize_r_factors.py\n p1973\n sbsg0\n (g17\n g2\n Ntp1974\n Rp1975\n (dp1976\n g21\n g23\n sg26\n-Vbin/phenix.data_viewer\n+Vbin/cctbx.make_install_HKLviewer_ChimeraX\n p1977\n sbg0\n (g17\n g2\n Ntp1978\n Rp1979\n (dp1980\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/crys3d/command_line/hklview.py\n+Vlib/python3/dist-packages/crys3d/command_line/make_install_HKLviewer_ChimeraX.py\n p1981\n sbsg0\n (g17\n g2\n Ntp1982\n Rp1983\n (dp1984\n g21\n g23\n sg26\n-Vbin/cctbx.data_viewer\n+Vbin/cctbx.multiplicity_viewer\n p1985\n sbg0\n (g17\n g2\n Ntp1986\n Rp1987\n (dp1988\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/crys3d/command_line/hklview.py\n+Vlib/python3/dist-packages/crys3d/command_line/multiplicity_viewer.py\n p1989\n sbsg0\n (g17\n g2\n Ntp1990\n Rp1991\n (dp1992\n g21\n g23\n sg26\n-Vbin/phenix.HKLinfo\n+Vbin/phenix.HKLviewer\n p1993\n sbg0\n (g17\n g2\n Ntp1994\n Rp1995\n (dp1996\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/crys3d/command_line/HKLinfo.py\n+Vlib/python3/dist-packages/crys3d/command_line/HKLviewer.py\n p1997\n sbsg0\n (g17\n g2\n Ntp1998\n Rp1999\n (dp2000\n g21\n g23\n sg26\n-Vbin/cctbx.HKLinfo\n+Vbin/cctbx.HKLviewer\n p2001\n sbg0\n (g17\n g2\n Ntp2002\n Rp2003\n (dp2004\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/crys3d/command_line/HKLinfo.py\n+Vlib/python3/dist-packages/crys3d/command_line/HKLviewer.py\n p2005\n sbsg0\n (g17\n g2\n Ntp2006\n Rp2007\n (dp2008\n g21\n g23\n sg26\n-Vbin/phenix.HKLviewer\n+Vbin/phasertng.HKLviewer\n p2009\n sbg0\n (g17\n g2\n Ntp2010\n Rp2011\n (dp2012\n@@ -5421,1500 +5421,1500 @@\n g2\n Ntp2014\n Rp2015\n (dp2016\n g21\n g23\n sg26\n-Vbin/cctbx.HKLviewer\n+Vbin/crys3d.model_viewer\n p2017\n sbg0\n (g17\n g2\n Ntp2018\n Rp2019\n (dp2020\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/crys3d/command_line/HKLviewer.py\n+Vlib/python3/dist-packages/crys3d/command_line/model_viewer.py\n p2021\n sbsg0\n (g17\n g2\n Ntp2022\n Rp2023\n (dp2024\n g21\n g23\n sg26\n-Vbin/phasertng.HKLviewer\n+Vbin/phenix.compare_datasets\n p2025\n sbg0\n (g17\n g2\n Ntp2026\n Rp2027\n (dp2028\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/crys3d/command_line/HKLviewer.py\n+Vlib/python3/dist-packages/crys3d/command_line/compare_datasets.py\n p2029\n sbsg0\n (g17\n g2\n Ntp2030\n Rp2031\n (dp2032\n g21\n g23\n sg26\n-Vbin/crys3d.model_viewer\n+Vbin/phenix.HKLinfo\n p2033\n sbg0\n (g17\n g2\n Ntp2034\n Rp2035\n (dp2036\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/crys3d/command_line/model_viewer.py\n+Vlib/python3/dist-packages/crys3d/command_line/HKLinfo.py\n p2037\n sbsg0\n (g17\n g2\n Ntp2038\n Rp2039\n (dp2040\n g21\n g23\n sg26\n-Vbin/cctbx.make_install_HKLviewer_ChimeraX\n+Vbin/cctbx.HKLinfo\n p2041\n sbg0\n (g17\n g2\n Ntp2042\n Rp2043\n (dp2044\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/crys3d/command_line/make_install_HKLviewer_ChimeraX.py\n+Vlib/python3/dist-packages/crys3d/command_line/HKLinfo.py\n p2045\n sbsg0\n (g17\n g2\n Ntp2046\n Rp2047\n (dp2048\n g21\n g23\n sg26\n-Vbin/cctbx.visualize_r_factors\n+Vbin/phenix.data_viewer\n p2049\n sbg0\n (g17\n g2\n Ntp2050\n Rp2051\n (dp2052\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/crys3d/command_line/visualize_r_factors.py\n+Vlib/python3/dist-packages/crys3d/command_line/hklview.py\n p2053\n sbsg0\n (g17\n g2\n Ntp2054\n Rp2055\n (dp2056\n g21\n g23\n sg26\n-Vbin/phenix.compare_datasets\n+Vbin/cctbx.data_viewer\n p2057\n sbg0\n (g17\n g2\n Ntp2058\n Rp2059\n (dp2060\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/crys3d/command_line/compare_datasets.py\n+Vlib/python3/dist-packages/crys3d/command_line/hklview.py\n p2061\n sbsg0\n (g17\n g2\n Ntp2062\n Rp2063\n (dp2064\n g21\n g23\n sg26\n-Vbin/smtbx.refine\n+Vbin/smtbx.anom_refine\n p2065\n sbg0\n (g17\n g2\n Ntp2066\n Rp2067\n (dp2068\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/smtbx/command_line/refine.py\n+Vlib/python3/dist-packages/smtbx/command_line/anom_refine.py\n p2069\n sbsg0\n (g17\n g2\n Ntp2070\n Rp2071\n (dp2072\n g21\n g23\n sg26\n-Vbin/smtbx.anom_refine\n+Vbin/smtbx.masks\n p2073\n sbg0\n (g17\n g2\n Ntp2074\n Rp2075\n (dp2076\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/smtbx/command_line/anom_refine.py\n+Vlib/python3/dist-packages/smtbx/command_line/masks.py\n p2077\n sbsg0\n (g17\n g2\n Ntp2078\n Rp2079\n (dp2080\n g21\n g23\n sg26\n-Vbin/smtbx.absolute_structure\n+Vbin/smtbx.benchmark_refinement\n p2081\n sbg0\n (g17\n g2\n Ntp2082\n Rp2083\n (dp2084\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/smtbx/command_line/absolute_structure.py\n+Vlib/python3/dist-packages/smtbx/command_line/benchmark_refinement.py\n p2085\n sbsg0\n (g17\n g2\n Ntp2086\n Rp2087\n (dp2088\n g21\n g23\n sg26\n-Vbin/smtbx.masks\n+Vbin/smtbx.absolute_structure\n p2089\n sbg0\n (g17\n g2\n Ntp2090\n Rp2091\n (dp2092\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/smtbx/command_line/masks.py\n+Vlib/python3/dist-packages/smtbx/command_line/absolute_structure.py\n p2093\n sbsg0\n (g17\n g2\n Ntp2094\n Rp2095\n (dp2096\n g21\n g23\n sg26\n-Vbin/smtbx.benchmark_refinement\n+Vbin/smtbx.refine\n p2097\n sbg0\n (g17\n g2\n Ntp2098\n Rp2099\n (dp2100\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/smtbx/command_line/benchmark_refinement.py\n+Vlib/python3/dist-packages/smtbx/command_line/refine.py\n p2101\n sbsg0\n (g17\n g2\n Ntp2102\n Rp2103\n (dp2104\n g21\n g23\n sg26\n-Vbin/iotbx.phil\n+Vbin/phenix.mtz_as_cif\n p2105\n sbg0\n (g17\n g2\n Ntp2106\n Rp2107\n (dp2108\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/iotbx/command_line/phil.py\n+Vlib/python3/dist-packages/iotbx/command_line/mtz_as_cif.py\n p2109\n sbsg0\n (g17\n g2\n Ntp2110\n Rp2111\n (dp2112\n g21\n g23\n sg26\n-Vbin/phenix.french_wilson\n+Vbin/iotbx.pdb.box_around_molecule\n p2113\n sbg0\n (g17\n g2\n Ntp2114\n Rp2115\n (dp2116\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/iotbx/command_line/french_wilson.py\n+Vlib/python3/dist-packages/iotbx/command_line/pdb.box_around_molecule.py\n p2117\n sbsg0\n (g17\n g2\n Ntp2118\n Rp2119\n (dp2120\n g21\n g23\n sg26\n-Vbin/iotbx.french_wilson\n+Vbin/iotbx.get_pubmed_citation\n p2121\n sbg0\n (g17\n g2\n Ntp2122\n Rp2123\n (dp2124\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/iotbx/command_line/french_wilson.py\n+Vlib/python3/dist-packages/iotbx/command_line/get_pubmed_citation.py\n p2125\n sbsg0\n (g17\n g2\n Ntp2126\n Rp2127\n (dp2128\n g21\n g23\n sg26\n-Vbin/phenix.mtz.dump\n+Vbin/iotbx.unique_with_biomt\n p2129\n sbg0\n (g17\n g2\n Ntp2130\n Rp2131\n (dp2132\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/iotbx/command_line/mtz.dump.py\n+Vlib/python3/dist-packages/iotbx/command_line/unique_with_biomt.py\n p2133\n sbsg0\n (g17\n g2\n Ntp2134\n Rp2135\n (dp2136\n g21\n g23\n sg26\n-Vbin/iotbx.mtz.dump\n+Vbin/phenix.unique_with_biomt\n p2137\n sbg0\n (g17\n g2\n Ntp2138\n Rp2139\n (dp2140\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/iotbx/command_line/mtz.dump.py\n+Vlib/python3/dist-packages/iotbx/command_line/unique_with_biomt.py\n p2141\n sbsg0\n (g17\n g2\n Ntp2142\n Rp2143\n (dp2144\n g21\n g23\n sg26\n-Vbin/iotbx.dtrek.to_cns\n+Vbin/phenix.pdb.mtrix_reconstruction\n p2145\n sbg0\n (g17\n g2\n Ntp2146\n Rp2147\n (dp2148\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/iotbx/command_line/dtrek.to_cns.py\n+Vlib/python3/dist-packages/iotbx/command_line/mtrix_reconstruction.py\n p2149\n sbsg0\n (g17\n g2\n Ntp2150\n Rp2151\n (dp2152\n g21\n g23\n sg26\n-Vbin/iotbx.export_scalepack_unmerged\n+Vbin/iotbx.dtrek.to_cns\n p2153\n sbg0\n (g17\n g2\n Ntp2154\n Rp2155\n (dp2156\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/iotbx/command_line/export_scalepack_unmerged.py\n+Vlib/python3/dist-packages/iotbx/command_line/dtrek.to_cns.py\n p2157\n sbsg0\n (g17\n g2\n Ntp2158\n Rp2159\n (dp2160\n g21\n g23\n sg26\n-Vbin/iotbx.cns.transfer_crystal_symmetry\n+Vbin/iotbx.shelx.as_xray_structure\n p2161\n sbg0\n (g17\n g2\n Ntp2162\n Rp2163\n (dp2164\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/iotbx/command_line/cns.transfer_crystal_symmetry.py\n+Vlib/python3/dist-packages/iotbx/command_line/shelx.as_xray_structure.py\n p2165\n sbsg0\n (g17\n g2\n Ntp2166\n Rp2167\n (dp2168\n g21\n g23\n sg26\n-Vbin/cctbx.show_systematic_absences\n+Vbin/iotbx.pdb.get_citation\n p2169\n sbg0\n (g17\n g2\n Ntp2170\n Rp2171\n (dp2172\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/iotbx/command_line/show_systematic_absences.py\n+Vlib/python3/dist-packages/iotbx/command_line/pdb_get_citation.py\n p2173\n sbsg0\n (g17\n g2\n Ntp2174\n Rp2175\n (dp2176\n g21\n g23\n sg26\n-Vbin/iotbx.build_phil_cache\n+Vbin/phenix.reflection_statistics\n p2177\n sbg0\n (g17\n g2\n Ntp2178\n Rp2179\n (dp2180\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/iotbx/command_line/build_phil_cache.py\n+Vlib/python3/dist-packages/iotbx/command_line/reflection_statistics.py\n p2181\n sbsg0\n (g17\n g2\n Ntp2182\n Rp2183\n (dp2184\n g21\n g23\n sg26\n-Vbin/iotbx.pdb.join_fragment_files\n+Vbin/iotbx.r_free_flags_accumulation\n p2185\n sbg0\n (g17\n g2\n Ntp2186\n Rp2187\n (dp2188\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/iotbx/command_line/pdb.join_fragment_files.py\n+Vlib/python3/dist-packages/iotbx/command_line/r_free_flags_accumulation.py\n p2189\n sbsg0\n (g17\n g2\n Ntp2190\n Rp2191\n (dp2192\n g21\n g23\n sg26\n-Vbin/iotbx.shelx.dump_as_python\n+Vbin/iotbx.build_phil_cache\n p2193\n sbg0\n (g17\n g2\n Ntp2194\n Rp2195\n (dp2196\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/iotbx/command_line/shelx.dump_as_python.py\n+Vlib/python3/dist-packages/iotbx/command_line/build_phil_cache.py\n p2197\n sbsg0\n (g17\n g2\n Ntp2198\n Rp2199\n (dp2200\n g21\n g23\n sg26\n-Vbin/phenix.emma\n+Vbin/phenix.reindex\n p2201\n sbg0\n (g17\n g2\n Ntp2202\n Rp2203\n (dp2204\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/iotbx/command_line/emma.py\n+Vlib/python3/dist-packages/iotbx/command_line/reindex.py\n p2205\n sbsg0\n (g17\n g2\n Ntp2206\n Rp2207\n (dp2208\n g21\n g23\n sg26\n-Vbin/iotbx.emma\n+Vbin/iotbx.phil\n p2209\n sbg0\n (g17\n g2\n Ntp2210\n Rp2211\n (dp2212\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/iotbx/command_line/emma.py\n+Vlib/python3/dist-packages/iotbx/command_line/phil.py\n p2213\n sbsg0\n (g17\n g2\n Ntp2214\n Rp2215\n (dp2216\n g21\n g23\n sg26\n-Vbin/iotbx.pdb.as_xray_structure\n+Vbin/iotbx.cns.reflection_reader\n p2217\n sbg0\n (g17\n g2\n Ntp2218\n Rp2219\n (dp2220\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/iotbx/command_line/pdb.as_xray_structure.py\n+Vlib/python3/dist-packages/iotbx/command_line/cns.reflection_reader.py\n p2221\n sbsg0\n (g17\n g2\n Ntp2222\n Rp2223\n (dp2224\n g21\n g23\n sg26\n-Vbin/iotbx.pdb.sort_atoms\n+Vbin/iotbx.r_free_flags_as_cns\n p2225\n sbg0\n (g17\n g2\n Ntp2226\n Rp2227\n (dp2228\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/iotbx/command_line/sort_atoms.py\n+Vlib/python3/dist-packages/iotbx/command_line/r_free_flags_as_cns.py\n p2229\n sbsg0\n (g17\n g2\n Ntp2230\n Rp2231\n (dp2232\n g21\n g23\n sg26\n-Vbin/iotbx.pdb.flip_symmetric_amino_acids\n+Vbin/phenix.cns_as_mtz\n p2233\n sbg0\n (g17\n g2\n Ntp2234\n Rp2235\n (dp2236\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/iotbx/command_line/flip_symmetric_amino_acids.py\n+Vlib/python3/dist-packages/iotbx/command_line/cns_as_mtz.py\n p2237\n sbsg0\n (g17\n g2\n Ntp2238\n Rp2239\n (dp2240\n g21\n g23\n sg26\n-Vbin/iotbx.r_free_flags_as_cns\n+Vbin/phenix.french_wilson\n p2241\n sbg0\n (g17\n g2\n Ntp2242\n Rp2243\n (dp2244\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/iotbx/command_line/r_free_flags_as_cns.py\n+Vlib/python3/dist-packages/iotbx/command_line/french_wilson.py\n p2245\n sbsg0\n (g17\n g2\n Ntp2246\n Rp2247\n (dp2248\n g21\n g23\n sg26\n-Vbin/iotbx.pdb_labels_diff\n+Vbin/iotbx.french_wilson\n p2249\n sbg0\n (g17\n g2\n Ntp2250\n Rp2251\n (dp2252\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/iotbx/command_line/pdb_labels_diff.py\n+Vlib/python3/dist-packages/iotbx/command_line/french_wilson.py\n p2253\n sbsg0\n (g17\n g2\n Ntp2254\n Rp2255\n (dp2256\n g21\n g23\n sg26\n-Vbin/phenix.mtz_as_cif\n+Vbin/iotbx.cns.sdb_reader\n p2257\n sbg0\n (g17\n g2\n Ntp2258\n Rp2259\n (dp2260\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/iotbx/command_line/mtz_as_cif.py\n+Vlib/python3/dist-packages/iotbx/command_line/cns.sdb_reader.py\n p2261\n sbsg0\n (g17\n g2\n Ntp2262\n Rp2263\n (dp2264\n g21\n g23\n sg26\n-Vbin/phenix.merging_statistics\n+Vbin/iotbx.pdb.link_as_geometry_restraints_edits\n p2265\n sbg0\n (g17\n g2\n Ntp2266\n Rp2267\n (dp2268\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/iotbx/command_line/merging_statistics.py\n+Vlib/python3/dist-packages/iotbx/command_line/pdb.link_as_geometry_restraints_edits.py\n p2269\n sbsg0\n (g17\n g2\n Ntp2270\n Rp2271\n (dp2272\n g21\n g23\n sg26\n-Vbin/iotbx.merging_statistics\n+Vbin/iotbx.shelx.dump_as_python\n p2273\n sbg0\n (g17\n g2\n Ntp2274\n Rp2275\n (dp2276\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/iotbx/command_line/merging_statistics.py\n+Vlib/python3/dist-packages/iotbx/command_line/shelx.dump_as_python.py\n p2277\n sbsg0\n (g17\n g2\n Ntp2278\n Rp2279\n (dp2280\n g21\n g23\n sg26\n-Vbin/iotbx.xplor.map.show_summary\n+Vbin/iotbx.pdb.as_xray_structure\n p2281\n sbg0\n (g17\n g2\n Ntp2282\n Rp2283\n (dp2284\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/iotbx/command_line/xplor.map.show_summary.py\n+Vlib/python3/dist-packages/iotbx/command_line/pdb.as_xray_structure.py\n p2285\n sbsg0\n (g17\n g2\n Ntp2286\n Rp2287\n (dp2288\n g21\n g23\n sg26\n-Vbin/phenix.cif_as_pdb\n+Vbin/iotbx.split_data_cif\n p2289\n sbg0\n (g17\n g2\n Ntp2290\n Rp2291\n (dp2292\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/iotbx/command_line/cif_as_pdb.py\n+Vlib/python3/dist-packages/iotbx/command_line/split_data_cif.py\n p2293\n sbsg0\n (g17\n g2\n Ntp2294\n Rp2295\n (dp2296\n g21\n g23\n sg26\n-Vbin/iotbx.cif_as_pdb\n+Vbin/iotbx.cif.validate\n p2297\n sbg0\n (g17\n g2\n Ntp2298\n Rp2299\n (dp2300\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/iotbx/command_line/cif_as_pdb.py\n+Vlib/python3/dist-packages/iotbx/command_line/cif.validate.py\n p2301\n sbsg0\n (g17\n g2\n Ntp2302\n Rp2303\n (dp2304\n g21\n g23\n sg26\n-Vbin/phenix.explore_metric_symmetry\n+Vbin/iotbx.cif.as_miller_arrays\n p2305\n sbg0\n (g17\n g2\n Ntp2306\n Rp2307\n (dp2308\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/iotbx/command_line/explore_metric_symmetry.py\n+Vlib/python3/dist-packages/iotbx/command_line/cif.as_miller_arrays.py\n p2309\n sbsg0\n (g17\n g2\n Ntp2310\n Rp2311\n (dp2312\n g21\n g23\n sg26\n-Vbin/phenix.pdb.biomt_reconstruction\n+Vbin/iotbx.file_reader\n p2313\n sbg0\n (g17\n g2\n Ntp2314\n Rp2315\n (dp2316\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/iotbx/command_line/biomt_reconstruction.py\n+Vlib/python3/dist-packages/iotbx/command_line/file_reader.py\n p2317\n sbsg0\n (g17\n g2\n Ntp2318\n Rp2319\n (dp2320\n g21\n g23\n sg26\n-Vbin/iotbx.pdb.print_sequence\n+Vbin/iotbx.pdb_labels_comparison\n p2321\n sbg0\n (g17\n g2\n Ntp2322\n Rp2323\n (dp2324\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/iotbx/command_line/pdb.print_sequence.py\n+Vlib/python3/dist-packages/iotbx/command_line/pdb_labels_comparison.py\n p2325\n sbsg0\n (g17\n g2\n Ntp2326\n Rp2327\n (dp2328\n g21\n g23\n sg26\n-Vbin/iotbx.pdb_as_fasta\n+Vbin/phenix.pdb.hierarchy\n p2329\n sbg0\n (g17\n g2\n Ntp2330\n Rp2331\n (dp2332\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/iotbx/command_line/pdb_as_fasta.py\n+Vlib/python3/dist-packages/iotbx/command_line/pdb.hierarchy.py\n p2333\n sbsg0\n (g17\n g2\n Ntp2334\n Rp2335\n (dp2336\n g21\n g23\n sg26\n-Vbin/iotbx.show_distances\n+Vbin/iotbx.cns.transfer_crystal_symmetry\n p2337\n sbg0\n (g17\n g2\n Ntp2338\n Rp2339\n (dp2340\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/iotbx/command_line/show_distances.py\n+Vlib/python3/dist-packages/iotbx/command_line/cns.transfer_crystal_symmetry.py\n p2341\n sbsg0\n (g17\n g2\n Ntp2342\n Rp2343\n (dp2344\n g21\n g23\n sg26\n-Vbin/iotbx.pdb.box_around_molecule\n+Vbin/iotbx.distance_least_squares\n p2345\n sbg0\n (g17\n g2\n Ntp2346\n Rp2347\n (dp2348\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/iotbx/command_line/pdb.box_around_molecule.py\n+Vlib/python3/dist-packages/iotbx/command_line/distance_least_squares.py\n p2349\n sbsg0\n (g17\n g2\n Ntp2350\n Rp2351\n (dp2352\n g21\n g23\n sg26\n-Vbin/iotbx.symmetry_search\n+Vbin/iotbx.r_free_flags_completion_simple\n p2353\n sbg0\n (g17\n g2\n Ntp2354\n Rp2355\n (dp2356\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/iotbx/command_line/symmetry_search.py\n+Vlib/python3/dist-packages/iotbx/command_line/r_free_flags_completion_simple.py\n p2357\n sbsg0\n (g17\n g2\n Ntp2358\n Rp2359\n (dp2360\n g21\n g23\n sg26\n-Vbin/phenix.csv_as_mtz\n+Vbin/iotbx.export_scalepack_unmerged\n p2361\n sbg0\n (g17\n g2\n Ntp2362\n Rp2363\n (dp2364\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/iotbx/command_line/csv_as_mtz.py\n+Vlib/python3/dist-packages/iotbx/command_line/export_scalepack_unmerged.py\n p2365\n sbsg0\n (g17\n g2\n Ntp2366\n Rp2367\n (dp2368\n g21\n g23\n sg26\n-Vbin/iotbx.poscar_as_xray_structure\n+Vbin/iotbx.reflection_file_reader\n p2369\n sbg0\n (g17\n g2\n Ntp2370\n Rp2371\n (dp2372\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/iotbx/command_line/poscar_as_xray_structure.py\n+Vlib/python3/dist-packages/iotbx/command_line/reflection_file_reader.py\n p2373\n sbsg0\n (g17\n g2\n Ntp2374\n Rp2375\n (dp2376\n g21\n g23\n sg26\n-Vbin/phenix.pdb.mtrix_reconstruction\n+Vbin/phenix.resolution\n p2377\n sbg0\n (g17\n g2\n Ntp2378\n Rp2379\n (dp2380\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/iotbx/command_line/mtrix_reconstruction.py\n+Vlib/python3/dist-packages/iotbx/command_line/effective_resolution.py\n p2381\n sbsg0\n (g17\n g2\n Ntp2382\n Rp2383\n (dp2384\n g21\n g23\n sg26\n-Vbin/phenix.reindex\n+Vbin/cctbx.show_systematic_absences\n p2385\n sbg0\n (g17\n g2\n Ntp2386\n Rp2387\n (dp2388\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/iotbx/command_line/reindex.py\n+Vlib/python3/dist-packages/iotbx/command_line/show_systematic_absences.py\n p2389\n sbsg0\n (g17\n g2\n Ntp2390\n Rp2391\n (dp2392\n g21\n g23\n sg26\n-Vbin/iotbx.cns.sdb_reader\n+Vbin/iotbx.pdb.join_fragment_files\n p2393\n sbg0\n (g17\n g2\n Ntp2394\n Rp2395\n (dp2396\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/iotbx/command_line/cns.sdb_reader.py\n+Vlib/python3/dist-packages/iotbx/command_line/pdb.join_fragment_files.py\n p2397\n sbsg0\n (g17\n g2\n Ntp2398\n Rp2399\n (dp2400\n g21\n g23\n sg26\n-Vbin/iotbx.lattice_symmetry\n+Vbin/iotbx.pdb.superpose_centers_of_mass\n p2401\n sbg0\n (g17\n g2\n Ntp2402\n Rp2403\n (dp2404\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/iotbx/command_line/lattice_symmetry.py\n+Vlib/python3/dist-packages/iotbx/command_line/pdb.superpose_centers_of_mass.py\n p2405\n sbsg0\n (g17\n g2\n Ntp2406\n Rp2407\n (dp2408\n g21\n g23\n sg26\n-Vbin/iotbx.split_data_cif\n+Vbin/phenix.pdb_cif_conversion\n p2409\n sbg0\n (g17\n g2\n Ntp2410\n Rp2411\n (dp2412\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/iotbx/command_line/split_data_cif.py\n+Vlib/python3/dist-packages/iotbx/command_line/pdb_cif_conversion.py\n p2413\n sbsg0\n (g17\n g2\n Ntp2414\n Rp2415\n (dp2416\n g21\n g23\n sg26\n-Vbin/iotbx.pdb.add_conformations\n+Vbin/iotbx.pdb.insert_scale_records\n p2417\n sbg0\n (g17\n g2\n Ntp2418\n Rp2419\n (dp2420\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/iotbx/command_line/pdb_add_conformations.py\n+Vlib/python3/dist-packages/iotbx/command_line/pdb.insert_scale_records.py\n p2421\n sbsg0\n (g17\n g2\n Ntp2422\n Rp2423\n (dp2424\n g21\n g23\n sg26\n-Vbin/phenix.pdb.b_factor_stats\n+Vbin/iotbx.pdb.show_connectivity\n p2425\n sbg0\n (g17\n g2\n Ntp2426\n Rp2427\n (dp2428\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/iotbx/command_line/pdb.b_factor_stats.py\n+Vlib/python3/dist-packages/iotbx/command_line/pdb_show_connectivity.py\n p2429\n sbsg0\n (g17\n g2\n Ntp2430\n Rp2431\n (dp2432\n g21\n g23\n sg26\n-Vbin/iotbx.get_pubmed_citation\n+Vbin/iotbx.pdb.add_conformations\n p2433\n sbg0\n (g17\n g2\n Ntp2434\n Rp2435\n (dp2436\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/iotbx/command_line/get_pubmed_citation.py\n+Vlib/python3/dist-packages/iotbx/command_line/pdb_add_conformations.py\n p2437\n sbsg0\n (g17\n g2\n Ntp2438\n Rp2439\n (dp2440\n g21\n g23\n sg26\n-Vbin/iotbx.dano_as_amplitudes\n+Vbin/cctbx.patterson_map\n p2441\n sbg0\n (g17\n g2\n Ntp2442\n Rp2443\n (dp2444\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/iotbx/command_line/dano_as_amplitudes.py\n+Vlib/python3/dist-packages/iotbx/command_line/patterson_map.py\n p2445\n sbsg0\n (g17\n g2\n Ntp2446\n Rp2447\n (dp2448\n g21\n g23\n sg26\n-Vbin/iotbx.unique_with_biomt\n+Vbin/iotbx.pdb.print_sequence\n p2449\n sbg0\n (g17\n g2\n Ntp2450\n Rp2451\n (dp2452\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/iotbx/command_line/unique_with_biomt.py\n+Vlib/python3/dist-packages/iotbx/command_line/pdb.print_sequence.py\n p2453\n sbsg0\n (g17\n g2\n Ntp2454\n Rp2455\n (dp2456\n g21\n g23\n sg26\n-Vbin/phenix.unique_with_biomt\n+Vbin/iotbx.xplor.map.show_summary\n p2457\n sbg0\n (g17\n g2\n Ntp2458\n Rp2459\n (dp2460\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/iotbx/command_line/unique_with_biomt.py\n+Vlib/python3/dist-packages/iotbx/command_line/xplor.map.show_summary.py\n p2461\n sbsg0\n (g17\n g2\n Ntp2462\n Rp2463\n (dp2464\n g21\n g23\n sg26\n-Vbin/iotbx.cbf_read\n+Vbin/phenix.mtz.dump\n p2465\n sbg0\n (g17\n g2\n Ntp2466\n Rp2467\n (dp2468\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/iotbx/command_line/cbf_read.py\n+Vlib/python3/dist-packages/iotbx/command_line/mtz.dump.py\n p2469\n sbsg0\n (g17\n g2\n Ntp2470\n Rp2471\n (dp2472\n g21\n g23\n sg26\n-Vbin/iotbx.cif.validate\n+Vbin/iotbx.mtz.dump\n p2473\n sbg0\n (g17\n g2\n Ntp2474\n Rp2475\n (dp2476\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/iotbx/command_line/cif.validate.py\n+Vlib/python3/dist-packages/iotbx/command_line/mtz.dump.py\n p2477\n sbsg0\n (g17\n g2\n Ntp2478\n Rp2479\n (dp2480\n g21\n g23\n sg26\n-Vbin/phenix.pdb.hierarchy\n+Vbin/iotbx.simple_map_coefficients\n p2481\n sbg0\n (g17\n g2\n Ntp2482\n Rp2483\n (dp2484\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/iotbx/command_line/pdb.hierarchy.py\n+Vlib/python3/dist-packages/iotbx/command_line/simple_map_coefficients.py\n p2485\n sbsg0\n (g17\n g2\n Ntp2486\n Rp2487\n (dp2488\n g21\n g23\n sg26\n-Vbin/phenix.cns_as_mtz\n+Vbin/iotbx.cif.as_xray_structure\n p2489\n sbg0\n (g17\n g2\n Ntp2490\n Rp2491\n (dp2492\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/iotbx/command_line/cns_as_mtz.py\n+Vlib/python3/dist-packages/iotbx/command_line/cif.as_xray_structure.py\n p2493\n sbsg0\n (g17\n g2\n Ntp2494\n Rp2495\n (dp2496\n g21\n g23\n sg26\n-Vbin/iotbx.r_free_flags_accumulation\n+Vbin/iotbx.reflection_file_editor\n p2497\n sbg0\n (g17\n g2\n Ntp2498\n Rp2499\n (dp2500\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/iotbx/command_line/r_free_flags_accumulation.py\n+Vlib/python3/dist-packages/iotbx/command_line/reflection_file_editor.py\n p2501\n sbsg0\n (g17\n g2\n Ntp2502\n Rp2503\n (dp2504\n g21\n g23\n sg26\n-Vbin/iotbx.cns.reflection_reader\n+Vbin/iotbx.pdb.flip_symmetric_amino_acids\n p2505\n sbg0\n (g17\n g2\n Ntp2506\n Rp2507\n (dp2508\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/iotbx/command_line/cns.reflection_reader.py\n+Vlib/python3/dist-packages/iotbx/command_line/flip_symmetric_amino_acids.py\n p2509\n sbsg0\n (g17\n g2\n Ntp2510\n Rp2511\n (dp2512\n g21\n g23\n sg26\n-Vbin/iotbx.file_reader\n+Vbin/iotbx.pdb.sort_atoms\n p2513\n sbg0\n (g17\n g2\n Ntp2514\n Rp2515\n (dp2516\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/iotbx/command_line/file_reader.py\n+Vlib/python3/dist-packages/iotbx/command_line/sort_atoms.py\n p2517\n sbsg0\n (g17\n g2\n Ntp2518\n Rp2519\n (dp2520\n g21\n g23\n sg26\n-Vbin/iotbx.crystal_symmetry_from_any\n+Vbin/iotbx.dano_as_amplitudes\n p2521\n sbg0\n (g17\n g2\n Ntp2522\n Rp2523\n (dp2524\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/iotbx/command_line/crystal_symmetry_from_any.py\n+Vlib/python3/dist-packages/iotbx/command_line/dano_as_amplitudes.py\n p2525\n sbsg0\n (g17\n g2\n Ntp2526\n Rp2527\n (dp2528\n g21\n g23\n sg26\n-Vbin/labelit.png\n+Vbin/iotbx.pdb_labels_diff\n p2529\n sbg0\n (g17\n g2\n Ntp2530\n Rp2531\n (dp2532\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/iotbx/command_line/detector_image_as_png.py\n+Vlib/python3/dist-packages/iotbx/command_line/pdb_labels_diff.py\n p2533\n sbsg0\n (g17\n g2\n Ntp2534\n Rp2535\n (dp2536\n g21\n g23\n sg26\n-Vbin/cctbx.patterson_map\n+Vbin/iotbx.pdb_as_fasta\n p2537\n sbg0\n (g17\n g2\n Ntp2538\n Rp2539\n (dp2540\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/iotbx/command_line/patterson_map.py\n+Vlib/python3/dist-packages/iotbx/command_line/pdb_as_fasta.py\n p2541\n sbsg0\n (g17\n g2\n Ntp2542\n Rp2543\n (dp2544\n g21\n g23\n sg26\n-Vbin/phenix.pdb_as_cif\n+Vbin/iotbx.pdb_remediator\n p2545\n sbg0\n (g17\n g2\n Ntp2546\n Rp2547\n (dp2548\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/iotbx/command_line/pdb_as_cif.py\n+Vlib/python3/dist-packages/iotbx/command_line/pdb_remediator.py\n p2549\n sbsg0\n (g17\n g2\n Ntp2550\n Rp2551\n (dp2552\n g21\n g23\n sg26\n-Vbin/iotbx.pdb_labels_comparison\n+Vbin/phenix.csv_as_mtz\n p2553\n sbg0\n (g17\n g2\n Ntp2554\n Rp2555\n (dp2556\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/iotbx/command_line/pdb_labels_comparison.py\n+Vlib/python3/dist-packages/iotbx/command_line/csv_as_mtz.py\n p2557\n sbsg0\n (g17\n g2\n Ntp2558\n Rp2559\n (dp2560\n@@ -6939,257 +6939,257 @@\n g2\n Ntp2566\n Rp2567\n (dp2568\n g21\n g23\n sg26\n-Vbin/iotbx.pdb.get_citation\n+Vbin/iotbx.lattice_symmetry\n p2569\n sbg0\n (g17\n g2\n Ntp2570\n Rp2571\n (dp2572\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/iotbx/command_line/pdb_get_citation.py\n+Vlib/python3/dist-packages/iotbx/command_line/lattice_symmetry.py\n p2573\n sbsg0\n (g17\n g2\n Ntp2574\n Rp2575\n (dp2576\n g21\n g23\n sg26\n-Vbin/iotbx.r_free_flags_completion_simple\n+Vbin/labelit.png\n p2577\n sbg0\n (g17\n g2\n Ntp2578\n Rp2579\n (dp2580\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/iotbx/command_line/r_free_flags_completion_simple.py\n+Vlib/python3/dist-packages/iotbx/command_line/detector_image_as_png.py\n p2581\n sbsg0\n (g17\n g2\n Ntp2582\n Rp2583\n (dp2584\n g21\n g23\n sg26\n-Vbin/iotbx.pdb.split_models\n+Vbin/iotbx.crystal_symmetry_from_any\n p2585\n sbg0\n (g17\n g2\n Ntp2586\n Rp2587\n (dp2588\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/iotbx/command_line/pdb_split_models.py\n+Vlib/python3/dist-packages/iotbx/command_line/crystal_symmetry_from_any.py\n p2589\n sbsg0\n (g17\n g2\n Ntp2590\n Rp2591\n (dp2592\n g21\n g23\n sg26\n-Vbin/iotbx.blast_pdb\n+Vbin/phenix.explore_metric_symmetry\n p2593\n sbg0\n (g17\n g2\n Ntp2594\n Rp2595\n (dp2596\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/iotbx/command_line/blast_pdb.py\n+Vlib/python3/dist-packages/iotbx/command_line/explore_metric_symmetry.py\n p2597\n sbsg0\n (g17\n g2\n Ntp2598\n Rp2599\n (dp2600\n g21\n g23\n sg26\n-Vbin/iotbx.cif.as_xray_structure\n+Vbin/iotbx.shelx.as_cif\n p2601\n sbg0\n (g17\n g2\n Ntp2602\n Rp2603\n (dp2604\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/iotbx/command_line/cif.as_xray_structure.py\n+Vlib/python3/dist-packages/iotbx/command_line/shelx.as_cif.py\n p2605\n sbsg0\n (g17\n g2\n Ntp2606\n Rp2607\n (dp2608\n g21\n g23\n sg26\n-Vbin/iotbx.pdb.link_as_geometry_restraints_edits\n+Vbin/iotbx.cbf_read\n p2609\n sbg0\n (g17\n g2\n Ntp2610\n Rp2611\n (dp2612\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/iotbx/command_line/pdb.link_as_geometry_restraints_edits.py\n+Vlib/python3/dist-packages/iotbx/command_line/cbf_read.py\n p2613\n sbsg0\n (g17\n g2\n Ntp2614\n Rp2615\n (dp2616\n g21\n g23\n sg26\n-Vbin/iotbx.pdb.show_connectivity\n+Vbin/iotbx.poscar_as_xray_structure\n p2617\n sbg0\n (g17\n g2\n Ntp2618\n Rp2619\n (dp2620\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/iotbx/command_line/pdb_show_connectivity.py\n+Vlib/python3/dist-packages/iotbx/command_line/poscar_as_xray_structure.py\n p2621\n sbsg0\n (g17\n g2\n Ntp2622\n Rp2623\n (dp2624\n g21\n g23\n sg26\n-Vbin/iotbx.reflection_file_reader\n+Vbin/iotbx.blast_pdb\n p2625\n sbg0\n (g17\n g2\n Ntp2626\n Rp2627\n (dp2628\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/iotbx/command_line/reflection_file_reader.py\n+Vlib/python3/dist-packages/iotbx/command_line/blast_pdb.py\n p2629\n sbsg0\n (g17\n g2\n Ntp2630\n Rp2631\n (dp2632\n g21\n g23\n sg26\n-Vbin/iotbx.shelx.as_cif\n+Vbin/phenix.pdb.b_factor_stats\n p2633\n sbg0\n (g17\n g2\n Ntp2634\n Rp2635\n (dp2636\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/iotbx/command_line/shelx.as_cif.py\n+Vlib/python3/dist-packages/iotbx/command_line/pdb.b_factor_stats.py\n p2637\n sbsg0\n (g17\n g2\n Ntp2638\n Rp2639\n (dp2640\n g21\n g23\n sg26\n-Vbin/iotbx.pdb.superpose_centers_of_mass\n+Vbin/phenix.pdb_as_cif\n p2641\n sbg0\n (g17\n g2\n Ntp2642\n Rp2643\n (dp2644\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/iotbx/command_line/pdb.superpose_centers_of_mass.py\n+Vlib/python3/dist-packages/iotbx/command_line/pdb_as_cif.py\n p2645\n sbsg0\n (g17\n g2\n Ntp2646\n Rp2647\n (dp2648\n g21\n g23\n sg26\n-Vbin/iotbx.pdb.insert_scale_records\n+Vbin/phenix.reflection_file_converter\n p2649\n sbg0\n (g17\n g2\n Ntp2650\n Rp2651\n (dp2652\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/iotbx/command_line/pdb.insert_scale_records.py\n+Vlib/python3/dist-packages/iotbx/command_line/reflection_file_converter.py\n p2653\n sbsg0\n (g17\n g2\n Ntp2654\n Rp2655\n (dp2656\n g21\n g23\n sg26\n-Vbin/phenix.reflection_file_converter\n+Vbin/iotbx.reflection_file_converter\n p2657\n sbg0\n (g17\n g2\n Ntp2658\n Rp2659\n (dp2660\n@@ -7203,224 +7203,224 @@\n g2\n Ntp2662\n Rp2663\n (dp2664\n g21\n g23\n sg26\n-Vbin/iotbx.reflection_file_converter\n+Vbin/iotbx.show_distances\n p2665\n sbg0\n (g17\n g2\n Ntp2666\n Rp2667\n (dp2668\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/iotbx/command_line/reflection_file_converter.py\n+Vlib/python3/dist-packages/iotbx/command_line/show_distances.py\n p2669\n sbsg0\n (g17\n g2\n Ntp2670\n Rp2671\n (dp2672\n g21\n g23\n sg26\n-Vbin/iotbx.reflection_file_editor\n+Vbin/iotbx.symmetry_search\n p2673\n sbg0\n (g17\n g2\n Ntp2674\n Rp2675\n (dp2676\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/iotbx/command_line/reflection_file_editor.py\n+Vlib/python3/dist-packages/iotbx/command_line/symmetry_search.py\n p2677\n sbsg0\n (g17\n g2\n Ntp2678\n Rp2679\n (dp2680\n g21\n g23\n sg26\n-Vbin/iotbx.pdb_remediator\n+Vbin/phenix.merging_statistics\n p2681\n sbg0\n (g17\n g2\n Ntp2682\n Rp2683\n (dp2684\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/iotbx/command_line/pdb_remediator.py\n+Vlib/python3/dist-packages/iotbx/command_line/merging_statistics.py\n p2685\n sbsg0\n (g17\n g2\n Ntp2686\n Rp2687\n (dp2688\n g21\n g23\n sg26\n-Vbin/iotbx.shelx.as_xray_structure\n+Vbin/iotbx.merging_statistics\n p2689\n sbg0\n (g17\n g2\n Ntp2690\n Rp2691\n (dp2692\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/iotbx/command_line/shelx.as_xray_structure.py\n+Vlib/python3/dist-packages/iotbx/command_line/merging_statistics.py\n p2693\n sbsg0\n (g17\n g2\n Ntp2694\n Rp2695\n (dp2696\n g21\n g23\n sg26\n-Vbin/iotbx.simple_map_coefficients\n+Vbin/phenix.cif_as_pdb\n p2697\n sbg0\n (g17\n g2\n Ntp2698\n Rp2699\n (dp2700\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/iotbx/command_line/simple_map_coefficients.py\n+Vlib/python3/dist-packages/iotbx/command_line/cif_as_pdb.py\n p2701\n sbsg0\n (g17\n g2\n Ntp2702\n Rp2703\n (dp2704\n g21\n g23\n sg26\n-Vbin/iotbx.distance_least_squares\n+Vbin/iotbx.cif_as_pdb\n p2705\n sbg0\n (g17\n g2\n Ntp2706\n Rp2707\n (dp2708\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/iotbx/command_line/distance_least_squares.py\n+Vlib/python3/dist-packages/iotbx/command_line/cif_as_pdb.py\n p2709\n sbsg0\n (g17\n g2\n Ntp2710\n Rp2711\n (dp2712\n g21\n g23\n sg26\n-Vbin/iotbx.cif.as_miller_arrays\n+Vbin/phenix.emma\n p2713\n sbg0\n (g17\n g2\n Ntp2714\n Rp2715\n (dp2716\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/iotbx/command_line/cif.as_miller_arrays.py\n+Vlib/python3/dist-packages/iotbx/command_line/emma.py\n p2717\n sbsg0\n (g17\n g2\n Ntp2718\n Rp2719\n (dp2720\n g21\n g23\n sg26\n-Vbin/phenix.pdb_cif_conversion\n+Vbin/iotbx.emma\n p2721\n sbg0\n (g17\n g2\n Ntp2722\n Rp2723\n (dp2724\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/iotbx/command_line/pdb_cif_conversion.py\n+Vlib/python3/dist-packages/iotbx/command_line/emma.py\n p2725\n sbsg0\n (g17\n g2\n Ntp2726\n Rp2727\n (dp2728\n g21\n g23\n sg26\n-Vbin/phenix.resolution\n+Vbin/iotbx.pdb.split_models\n p2729\n sbg0\n (g17\n g2\n Ntp2730\n Rp2731\n (dp2732\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/iotbx/command_line/effective_resolution.py\n+Vlib/python3/dist-packages/iotbx/command_line/pdb_split_models.py\n p2733\n sbsg0\n (g17\n g2\n Ntp2734\n Rp2735\n (dp2736\n g21\n g23\n sg26\n-Vbin/phenix.reflection_statistics\n+Vbin/phenix.pdb.biomt_reconstruction\n p2737\n sbg0\n (g17\n g2\n Ntp2738\n Rp2739\n (dp2740\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/iotbx/command_line/reflection_statistics.py\n+Vlib/python3/dist-packages/iotbx/command_line/biomt_reconstruction.py\n p2741\n sbsg0\n (g17\n g2\n Ntp2742\n Rp2743\n (dp2744\n@@ -7445,3502 +7445,3502 @@\n g2\n Ntp2750\n Rp2751\n (dp2752\n g21\n g23\n sg26\n-Vbin/mmtbx.rama_z\n+Vbin/phenix.mask\n p2753\n sbg0\n (g17\n g2\n Ntp2754\n Rp2755\n (dp2756\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/rama_z.py\n+Vlib/python3/dist-packages/mmtbx/command_line/mask.py\n p2757\n sbsg0\n (g17\n g2\n Ntp2758\n Rp2759\n (dp2760\n g21\n g23\n sg26\n-Vbin/phenix.rama_z\n+Vbin/mmtbx.development.aev\n p2761\n sbg0\n (g17\n g2\n Ntp2762\n Rp2763\n (dp2764\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/rama_z.py\n+Vlib/python3/dist-packages/mmtbx/command_line/development.aev.py\n p2765\n sbsg0\n (g17\n g2\n Ntp2766\n Rp2767\n (dp2768\n g21\n g23\n sg26\n-Vbin/mmtbx.mp_geo\n+Vbin/phenix.find_peaks_holes\n p2769\n sbg0\n (g17\n g2\n Ntp2770\n Rp2771\n (dp2772\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/mp_geo.py\n+Vlib/python3/dist-packages/mmtbx/command_line/find_peaks_holes.py\n p2773\n sbsg0\n (g17\n g2\n Ntp2774\n Rp2775\n (dp2776\n g21\n g23\n sg26\n-Vbin/phenix.map_box\n+Vbin/mmtbx.find_peaks_holes\n p2777\n sbg0\n (g17\n g2\n Ntp2778\n Rp2779\n (dp2780\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/map_box.py\n+Vlib/python3/dist-packages/mmtbx/command_line/find_peaks_holes.py\n p2781\n sbsg0\n (g17\n g2\n Ntp2782\n Rp2783\n (dp2784\n g21\n g23\n sg26\n-Vbin/phenix.kinemage\n+Vbin/phenix.helix_sheet_recs_as_pdb_files\n p2785\n sbg0\n (g17\n g2\n Ntp2786\n Rp2787\n (dp2788\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/kinemage.py\n+Vlib/python3/dist-packages/mmtbx/command_line/helix_sheet_recs_as_pdb_files.py\n p2789\n sbsg0\n (g17\n g2\n Ntp2790\n Rp2791\n (dp2792\n g21\n g23\n sg26\n-Vbin/molprobity.kinemage\n+Vbin/phenix.models_as_chains\n p2793\n sbg0\n (g17\n g2\n Ntp2794\n Rp2795\n (dp2796\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/kinemage.py\n+Vlib/python3/dist-packages/mmtbx/command_line/models_as_chains.py\n p2797\n sbsg0\n (g17\n g2\n Ntp2798\n Rp2799\n (dp2800\n g21\n g23\n sg26\n-Vbin/phenix.rna_validate_puckers\n+Vbin/phenix.real_space_diff_map\n p2801\n sbg0\n (g17\n g2\n Ntp2802\n Rp2803\n (dp2804\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/rna_validate_puckers.py\n+Vlib/python3/dist-packages/mmtbx/command_line/real_space_diff_map.py\n p2805\n sbsg0\n (g17\n g2\n Ntp2806\n Rp2807\n (dp2808\n g21\n g23\n sg26\n-Vbin/molprobity.rna_validate_puckers\n+Vbin/phenix.pdbtools\n p2809\n sbg0\n (g17\n g2\n Ntp2810\n Rp2811\n (dp2812\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/rna_validate_puckers.py\n+Vlib/python3/dist-packages/mmtbx/command_line/pdbtools.py\n p2813\n sbsg0\n (g17\n g2\n Ntp2814\n Rp2815\n (dp2816\n g21\n g23\n sg26\n-Vbin/phenix.rna_validate_suites\n+Vbin/phenix.mtz2map\n p2817\n sbg0\n (g17\n g2\n Ntp2818\n Rp2819\n (dp2820\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/rna_validate_suites.py\n+Vlib/python3/dist-packages/mmtbx/command_line/mtz2map.py\n p2821\n sbsg0\n (g17\n g2\n Ntp2822\n Rp2823\n (dp2824\n g21\n g23\n sg26\n-Vbin/molprobity.rna_validate_suites\n+Vbin/phenix.fft\n p2825\n sbg0\n (g17\n g2\n Ntp2826\n Rp2827\n (dp2828\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/rna_validate_suites.py\n+Vlib/python3/dist-packages/mmtbx/command_line/mtz2map.py\n p2829\n sbsg0\n (g17\n g2\n Ntp2830\n Rp2831\n (dp2832\n g21\n g23\n sg26\n-Vbin/mmtbx.reduce2\n+Vbin/mmtbx.fft\n p2833\n sbg0\n (g17\n g2\n Ntp2834\n Rp2835\n (dp2836\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/reduce2.py\n+Vlib/python3/dist-packages/mmtbx/command_line/mtz2map.py\n p2837\n sbsg0\n (g17\n g2\n Ntp2838\n Rp2839\n (dp2840\n g21\n g23\n sg26\n-Vbin/phenix.mask\n+Vbin/mmtbx.plan_sad_experiment\n p2841\n sbg0\n (g17\n g2\n Ntp2842\n Rp2843\n (dp2844\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/mask.py\n+Vlib/python3/dist-packages/mmtbx/command_line/plan_sad_experiment.py\n p2845\n sbsg0\n (g17\n g2\n Ntp2846\n Rp2847\n (dp2848\n g21\n g23\n sg26\n-Vbin/mmtbx.prepare_pdb_deposition\n+Vbin/mmtbx.superpose\n p2849\n sbg0\n (g17\n g2\n Ntp2850\n Rp2851\n (dp2852\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/prepare_pdb_deposition.py\n+Vlib/python3/dist-packages/mmtbx/command_line/superpose.py\n p2853\n sbsg0\n (g17\n g2\n Ntp2854\n Rp2855\n (dp2856\n g21\n g23\n sg26\n-Vbin/phenix.clashscore2\n+Vbin/mmtbx.development.validate_ligands\n p2857\n sbg0\n (g17\n g2\n Ntp2858\n Rp2859\n (dp2860\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/clashscore2.py\n+Vlib/python3/dist-packages/mmtbx/command_line/validate_ligands.py\n p2861\n sbsg0\n (g17\n g2\n Ntp2862\n Rp2863\n (dp2864\n g21\n g23\n sg26\n-Vbin/molprobity.clashscore2\n+Vbin/mmtbx.density_modification\n p2865\n sbg0\n (g17\n g2\n Ntp2866\n Rp2867\n (dp2868\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/clashscore2.py\n+Vlib/python3/dist-packages/mmtbx/command_line/density_modification.py\n p2869\n sbsg0\n (g17\n g2\n Ntp2870\n Rp2871\n (dp2872\n g21\n g23\n sg26\n-Vbin/mmtbx.clashscore2\n+Vbin/mmtbx.probe2\n p2873\n sbg0\n (g17\n g2\n Ntp2874\n Rp2875\n (dp2876\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/clashscore2.py\n+Vlib/python3/dist-packages/mmtbx/command_line/probe2.py\n p2877\n sbsg0\n (g17\n g2\n Ntp2878\n Rp2879\n (dp2880\n g21\n g23\n sg26\n-Vbin/mmtbx.search_pdb_symmetry\n+Vbin/phenix.comparama\n p2881\n sbg0\n (g17\n g2\n Ntp2882\n Rp2883\n (dp2884\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/search_pdb_symmetry.py\n+Vlib/python3/dist-packages/mmtbx/command_line/comparama.py\n p2885\n sbsg0\n (g17\n g2\n Ntp2886\n Rp2887\n (dp2888\n g21\n g23\n sg26\n-Vbin/phenix.secondary_structure_validation\n+Vbin/phenix.molprobity\n p2889\n sbg0\n (g17\n g2\n Ntp2890\n Rp2891\n (dp2892\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/secondary_structure_validation.py\n+Vlib/python3/dist-packages/mmtbx/command_line/molprobity.py\n p2893\n sbsg0\n (g17\n g2\n Ntp2894\n Rp2895\n (dp2896\n g21\n g23\n sg26\n-Vbin/phenix.holton_geometry_validation\n+Vbin/molprobity.molprobity\n p2897\n sbg0\n (g17\n g2\n Ntp2898\n Rp2899\n (dp2900\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/holton_geometry_validation.py\n+Vlib/python3/dist-packages/mmtbx/command_line/molprobity.py\n p2901\n sbsg0\n (g17\n g2\n Ntp2902\n Rp2903\n (dp2904\n g21\n g23\n sg26\n-Vbin/mmtbx.holton_geometry_validation\n+Vbin/mmtbx.hydrogenate\n p2905\n sbg0\n (g17\n g2\n Ntp2906\n Rp2907\n (dp2908\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/holton_geometry_validation.py\n+Vlib/python3/dist-packages/mmtbx/command_line/hydrogenate.py\n p2909\n sbsg0\n (g17\n g2\n Ntp2910\n Rp2911\n (dp2912\n g21\n g23\n sg26\n-Vbin/phenix.angle\n+Vbin/phenix.emringer\n p2913\n sbg0\n (g17\n g2\n Ntp2914\n Rp2915\n (dp2916\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/angle.py\n+Vlib/python3/dist-packages/mmtbx/command_line/emringer.py\n p2917\n sbsg0\n (g17\n g2\n Ntp2918\n Rp2919\n (dp2920\n g21\n g23\n sg26\n-Vbin/phenix.model_vs_map\n+Vbin/mmtbx.apply_ncs_to_ligand\n p2921\n sbg0\n (g17\n g2\n Ntp2922\n Rp2923\n (dp2924\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/model_vs_map.py\n+Vlib/python3/dist-packages/mmtbx/command_line/apply_ncs_to_ligand.py\n p2925\n sbsg0\n (g17\n g2\n Ntp2926\n Rp2927\n (dp2928\n g21\n g23\n sg26\n-Vbin/mmtbx.prune_model\n+Vbin/mmtbx.nonbonded_overlaps\n p2929\n sbg0\n (g17\n g2\n Ntp2930\n Rp2931\n (dp2932\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/prune_model.py\n+Vlib/python3/dist-packages/mmtbx/command_line/nonbonded_overlaps.py\n p2933\n sbsg0\n (g17\n g2\n Ntp2934\n Rp2935\n (dp2936\n g21\n g23\n sg26\n-Vbin/mmtbx.apply_ncs_to_ligand\n+Vbin/phenix.fake_f_obs\n p2937\n sbg0\n (g17\n g2\n Ntp2938\n Rp2939\n (dp2940\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/apply_ncs_to_ligand.py\n+Vlib/python3/dist-packages/mmtbx/command_line/fake_f_obs.py\n p2941\n sbsg0\n (g17\n g2\n Ntp2942\n Rp2943\n (dp2944\n g21\n g23\n sg26\n-Vbin/mmtbx.rigid_bond_test\n+Vbin/phenix.rna_validate_suites\n p2945\n sbg0\n (g17\n g2\n Ntp2946\n Rp2947\n (dp2948\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/rigid_bond_test.py\n+Vlib/python3/dist-packages/mmtbx/command_line/rna_validate_suites.py\n p2949\n sbsg0\n (g17\n g2\n Ntp2950\n Rp2951\n (dp2952\n g21\n g23\n sg26\n-Vbin/phenix.comparama\n+Vbin/molprobity.rna_validate_suites\n p2953\n sbg0\n (g17\n g2\n Ntp2954\n Rp2955\n (dp2956\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/comparama.py\n+Vlib/python3/dist-packages/mmtbx/command_line/rna_validate_suites.py\n p2957\n sbsg0\n (g17\n g2\n Ntp2958\n Rp2959\n (dp2960\n g21\n g23\n sg26\n-Vbin/phenix.cablam_idealization\n+Vbin/phenix.tls\n p2961\n sbg0\n (g17\n g2\n Ntp2962\n Rp2963\n (dp2964\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/cablam_idealization.py\n+Vlib/python3/dist-packages/mmtbx/command_line/tls.py\n p2965\n sbsg0\n (g17\n g2\n Ntp2966\n Rp2967\n (dp2968\n g21\n g23\n sg26\n-Vbin/phenix.pdbtools\n+Vbin/phenix.undowser2_validation\n p2969\n sbg0\n (g17\n g2\n Ntp2970\n Rp2971\n (dp2972\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/pdbtools.py\n+Vlib/python3/dist-packages/mmtbx/command_line/undowser2.py\n p2973\n sbsg0\n (g17\n g2\n Ntp2974\n Rp2975\n (dp2976\n g21\n g23\n sg26\n-Vbin/phenix.dynamics\n+Vbin/mmtbx.undowser2_validation\n p2977\n sbg0\n (g17\n g2\n Ntp2978\n Rp2979\n (dp2980\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/dynamics.py\n+Vlib/python3/dist-packages/mmtbx/command_line/undowser2.py\n p2981\n sbsg0\n (g17\n g2\n Ntp2982\n Rp2983\n (dp2984\n g21\n g23\n sg26\n-Vbin/phenix.fmodel\n+Vbin/molprobity.undowser2_validation\n p2985\n sbg0\n (g17\n g2\n Ntp2986\n Rp2987\n (dp2988\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/fmodel.py\n+Vlib/python3/dist-packages/mmtbx/command_line/undowser2.py\n p2989\n sbsg0\n (g17\n g2\n Ntp2990\n Rp2991\n (dp2992\n g21\n g23\n sg26\n-Vbin/phenix.rna_validate_bonds\n+Vbin/mmtbx.process_predicted_model\n p2993\n sbg0\n (g17\n g2\n Ntp2994\n Rp2995\n (dp2996\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/rna_validate_bonds.py\n+Vlib/python3/dist-packages/mmtbx/command_line/process_predicted_model.py\n p2997\n sbsg0\n (g17\n g2\n Ntp2998\n Rp2999\n (dp3000\n g21\n g23\n sg26\n-Vbin/molprobity.rna_validate_bonds\n+Vbin/phenix.process_predicted_model\n p3001\n sbg0\n (g17\n g2\n Ntp3002\n Rp3003\n (dp3004\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/rna_validate_bonds.py\n+Vlib/python3/dist-packages/mmtbx/command_line/process_predicted_model.py\n p3005\n sbsg0\n (g17\n g2\n Ntp3006\n Rp3007\n (dp3008\n g21\n g23\n sg26\n-Vbin/mmtbx.altloc_remediate\n+Vbin/phenix.pdb_interpretation\n p3009\n sbg0\n (g17\n g2\n Ntp3010\n Rp3011\n (dp3012\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/altloc_remediate.py\n+Vlib/python3/dist-packages/mmtbx/command_line/pdb_interpretation.py\n p3013\n sbsg0\n (g17\n g2\n Ntp3014\n Rp3015\n (dp3016\n g21\n g23\n sg26\n-Vbin/mmtbx.ribbons\n+Vbin/mmtbx.pdb_interpretation\n p3017\n sbg0\n (g17\n g2\n Ntp3018\n Rp3019\n (dp3020\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/ribbons.py\n+Vlib/python3/dist-packages/mmtbx/command_line/pdb_interpretation.py\n p3021\n sbsg0\n (g17\n g2\n Ntp3022\n Rp3023\n (dp3024\n g21\n g23\n sg26\n-Vbin/phenix.molprobity\n+Vbin/phenix.rna_validate\n p3025\n sbg0\n (g17\n g2\n Ntp3026\n Rp3027\n (dp3028\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/molprobity.py\n+Vlib/python3/dist-packages/mmtbx/command_line/rna_validate.py\n p3029\n sbsg0\n (g17\n g2\n Ntp3030\n Rp3031\n (dp3032\n g21\n g23\n sg26\n-Vbin/molprobity.molprobity\n+Vbin/molprobity.rna_validate\n p3033\n sbg0\n (g17\n g2\n Ntp3034\n Rp3035\n (dp3036\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/molprobity.py\n+Vlib/python3/dist-packages/mmtbx/command_line/rna_validate.py\n p3037\n sbsg0\n (g17\n g2\n Ntp3038\n Rp3039\n (dp3040\n g21\n g23\n sg26\n-Vbin/mmtbx.verify_mon_lib_data\n+Vbin/phenix.model_idealization\n p3041\n sbg0\n (g17\n g2\n Ntp3042\n Rp3043\n (dp3044\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/verify_mon_lib_data.py\n+Vlib/python3/dist-packages/mmtbx/command_line/model_idealization.py\n p3045\n sbsg0\n (g17\n g2\n Ntp3046\n Rp3047\n (dp3048\n g21\n g23\n sg26\n-Vbin/mmtbx.estimate_bijvoet_ratio\n+Vbin/phenix.rank_scale_map\n p3049\n sbg0\n (g17\n g2\n Ntp3050\n Rp3051\n (dp3052\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/estimate_bijvoet_ratio.py\n+Vlib/python3/dist-packages/mmtbx/command_line/rank_scale_map.py\n p3053\n sbsg0\n (g17\n g2\n Ntp3054\n Rp3055\n (dp3056\n g21\n g23\n sg26\n-Vbin/phenix.suitename\n+Vbin/mmtbx.find_residue_in_pdb\n p3057\n sbg0\n (g17\n g2\n Ntp3058\n Rp3059\n (dp3060\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/suitename.py\n+Vlib/python3/dist-packages/mmtbx/command_line/find_residue_in_pdb.py\n p3061\n sbsg0\n (g17\n g2\n Ntp3062\n Rp3063\n (dp3064\n g21\n g23\n sg26\n-Vbin/molprobity.suitename\n+Vbin/phenix.barbed_wire_analysis\n p3065\n sbg0\n (g17\n g2\n Ntp3066\n Rp3067\n (dp3068\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/suitename.py\n+Vlib/python3/dist-packages/mmtbx/command_line/barbed_wire_analysis.py\n p3069\n sbsg0\n (g17\n g2\n Ntp3070\n Rp3071\n (dp3072\n g21\n g23\n sg26\n-Vbin/cctbx.suitename\n+Vbin/molprobity.barbed_wire_analysis\n p3073\n sbg0\n (g17\n g2\n Ntp3074\n Rp3075\n (dp3076\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/suitename.py\n+Vlib/python3/dist-packages/mmtbx/command_line/barbed_wire_analysis.py\n p3077\n sbsg0\n (g17\n g2\n Ntp3078\n Rp3079\n (dp3080\n g21\n g23\n sg26\n-Vbin/phenix.cbetadev\n+Vbin/phenix.cablam_idealization\n p3081\n sbg0\n (g17\n g2\n Ntp3082\n Rp3083\n (dp3084\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/cbetadev.py\n+Vlib/python3/dist-packages/mmtbx/command_line/cablam_idealization.py\n p3085\n sbsg0\n (g17\n g2\n Ntp3086\n Rp3087\n (dp3088\n g21\n g23\n sg26\n-Vbin/molprobity.cbetadev\n+Vbin/phenix.fab_elbow_angle\n p3089\n sbg0\n (g17\n g2\n Ntp3090\n Rp3091\n (dp3092\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/cbetadev.py\n+Vlib/python3/dist-packages/mmtbx/command_line/fab_elbow_angle.py\n p3093\n sbsg0\n (g17\n g2\n Ntp3094\n Rp3095\n (dp3096\n g21\n g23\n sg26\n-Vbin/phenix.tls_analysis\n+Vbin/phenix.ramalyze\n p3097\n sbg0\n (g17\n g2\n Ntp3098\n Rp3099\n (dp3100\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/tls_analysis.py\n+Vlib/python3/dist-packages/mmtbx/command_line/ramalyze.py\n p3101\n sbsg0\n (g17\n g2\n Ntp3102\n Rp3103\n (dp3104\n g21\n g23\n sg26\n-Vbin/phenix.fake_f_obs\n+Vbin/molprobity.ramalyze\n p3105\n sbg0\n (g17\n g2\n Ntp3106\n Rp3107\n (dp3108\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/fake_f_obs.py\n+Vlib/python3/dist-packages/mmtbx/command_line/ramalyze.py\n p3109\n sbsg0\n (g17\n g2\n Ntp3110\n Rp3111\n (dp3112\n g21\n g23\n sg26\n-Vbin/phenix.polder\n+Vbin/phenix.model_map\n p3113\n sbg0\n (g17\n g2\n Ntp3114\n Rp3115\n (dp3116\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/polder.py\n+Vlib/python3/dist-packages/mmtbx/command_line/model_map.py\n p3117\n sbsg0\n (g17\n g2\n Ntp3118\n Rp3119\n (dp3120\n g21\n g23\n sg26\n-Vbin/mmtbx.show_r_factors_by_shell\n+Vbin/phenix.pdb_atom_selection\n p3121\n sbg0\n (g17\n g2\n Ntp3122\n Rp3123\n (dp3124\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/show_r_factors_by_shell.py\n+Vlib/python3/dist-packages/mmtbx/command_line/pdb_atom_selection.py\n p3125\n sbsg0\n (g17\n g2\n Ntp3126\n Rp3127\n (dp3128\n g21\n g23\n sg26\n-Vbin/phenix.map_to_model_histogram\n+Vbin/mmtbx.prepare_pdb_deposition\n p3129\n sbg0\n (g17\n g2\n Ntp3130\n Rp3131\n (dp3132\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/map_to_model_histogram.py\n+Vlib/python3/dist-packages/mmtbx/command_line/prepare_pdb_deposition.py\n p3133\n sbsg0\n (g17\n g2\n Ntp3134\n Rp3135\n (dp3136\n g21\n g23\n sg26\n-Vbin/phenix.secondary_structure_restraints\n+Vbin/mmtbx.development.electrons\n p3137\n sbg0\n (g17\n g2\n Ntp3138\n Rp3139\n (dp3140\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/secondary_structure_restraints.py\n+Vlib/python3/dist-packages/mmtbx/command_line/electrons.py\n p3141\n sbsg0\n (g17\n g2\n Ntp3142\n Rp3143\n (dp3144\n g21\n g23\n sg26\n-Vbin/phenix.reciprocal_space_arrays\n+Vbin/phenix.remove_outliers\n p3145\n sbg0\n (g17\n g2\n Ntp3146\n Rp3147\n (dp3148\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/reciprocal_space_arrays.py\n+Vlib/python3/dist-packages/mmtbx/command_line/remove_outliers.py\n p3149\n sbsg0\n (g17\n g2\n Ntp3150\n Rp3151\n (dp3152\n g21\n g23\n sg26\n-Vbin/phenix.cablam_validate\n+Vbin/mmtbx.rebuild_cablam_cache\n p3153\n sbg0\n (g17\n g2\n Ntp3154\n Rp3155\n (dp3156\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/cablam_validate.py\n+Vlib/python3/dist-packages/mmtbx/command_line/rebuild_cablam_cache.py\n p3157\n sbsg0\n (g17\n g2\n Ntp3158\n Rp3159\n (dp3160\n g21\n g23\n sg26\n-Vbin/phenix.xmanip\n+Vbin/mmtbx.super\n p3161\n sbg0\n (g17\n g2\n Ntp3162\n Rp3163\n (dp3164\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/xmanip.py\n+Vlib/python3/dist-packages/mmtbx/command_line/super.py\n p3165\n sbsg0\n (g17\n g2\n Ntp3166\n Rp3167\n (dp3168\n g21\n g23\n sg26\n-Vbin/mmtbx.massage_data\n+Vbin/phenix.clashscore\n p3169\n sbg0\n (g17\n g2\n Ntp3170\n Rp3171\n (dp3172\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/massage_data.py\n+Vlib/python3/dist-packages/mmtbx/command_line/clashscore.py\n p3173\n sbsg0\n (g17\n g2\n Ntp3174\n Rp3175\n (dp3176\n g21\n g23\n sg26\n-Vbin/phenix.omegalyze\n+Vbin/molprobity.clashscore\n p3177\n sbg0\n (g17\n g2\n Ntp3178\n Rp3179\n (dp3180\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/omegalyze.py\n+Vlib/python3/dist-packages/mmtbx/command_line/clashscore.py\n p3181\n sbsg0\n (g17\n g2\n Ntp3182\n Rp3183\n (dp3184\n g21\n g23\n sg26\n-Vbin/molprobity.omegalyze\n+Vbin/mmtbx.ribbons\n p3185\n sbg0\n (g17\n g2\n Ntp3186\n Rp3187\n (dp3188\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/omegalyze.py\n+Vlib/python3/dist-packages/mmtbx/command_line/ribbons.py\n p3189\n sbsg0\n (g17\n g2\n Ntp3190\n Rp3191\n (dp3192\n g21\n g23\n sg26\n-Vbin/phenix.pdb_interpretation\n+Vbin/phenix.undowser_validation\n p3193\n sbg0\n (g17\n g2\n Ntp3194\n Rp3195\n (dp3196\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/pdb_interpretation.py\n+Vlib/python3/dist-packages/mmtbx/command_line/undowser.py\n p3197\n sbsg0\n (g17\n g2\n Ntp3198\n Rp3199\n (dp3200\n g21\n g23\n sg26\n-Vbin/mmtbx.pdb_interpretation\n+Vbin/molprobity.undowser_validation\n p3201\n sbg0\n (g17\n g2\n Ntp3202\n Rp3203\n (dp3204\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/pdb_interpretation.py\n+Vlib/python3/dist-packages/mmtbx/command_line/undowser.py\n p3205\n sbsg0\n (g17\n g2\n Ntp3206\n Rp3207\n (dp3208\n g21\n g23\n sg26\n-Vbin/mmtbx.rebuild_cablam_cache\n+Vbin/phenix.reciprocal_space_arrays\n p3209\n sbg0\n (g17\n g2\n Ntp3210\n Rp3211\n (dp3212\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/rebuild_cablam_cache.py\n+Vlib/python3/dist-packages/mmtbx/command_line/reciprocal_space_arrays.py\n p3213\n sbsg0\n (g17\n g2\n Ntp3214\n Rp3215\n (dp3216\n g21\n g23\n sg26\n-Vbin/phenix.sort_hetatms\n+Vbin/phenix.validate_H\n p3217\n sbg0\n (g17\n g2\n Ntp3218\n Rp3219\n (dp3220\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/sort_hetatms.py\n+Vlib/python3/dist-packages/mmtbx/command_line/validate_H_cl_app.py\n p3221\n sbsg0\n (g17\n g2\n Ntp3222\n Rp3223\n (dp3224\n g21\n g23\n sg26\n-Vbin/phenix.emringer\n+Vbin/phenix.model_model_distances\n p3225\n sbg0\n (g17\n g2\n Ntp3226\n Rp3227\n (dp3228\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/emringer.py\n+Vlib/python3/dist-packages/mmtbx/command_line/model_model_distances.py\n p3229\n sbsg0\n (g17\n g2\n Ntp3230\n Rp3231\n (dp3232\n g21\n g23\n sg26\n-Vbin/phenix.sisa\n+Vbin/phenix.perigee\n p3233\n sbg0\n (g17\n g2\n Ntp3234\n Rp3235\n (dp3236\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/sisa.py\n+Vlib/python3/dist-packages/mmtbx/command_line/perigee.py\n p3237\n sbsg0\n (g17\n g2\n Ntp3238\n Rp3239\n (dp3240\n g21\n g23\n sg26\n-Vbin/mmtbx.super\n+Vbin/phenix.xmanip\n p3241\n sbg0\n (g17\n g2\n Ntp3242\n Rp3243\n (dp3244\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/super.py\n+Vlib/python3/dist-packages/mmtbx/command_line/xmanip.py\n p3245\n sbsg0\n (g17\n g2\n Ntp3246\n Rp3247\n (dp3248\n g21\n g23\n sg26\n-Vbin/mmtbx.development.aev\n+Vbin/mmtbx.validation_summary\n p3249\n sbg0\n (g17\n g2\n Ntp3250\n Rp3251\n (dp3252\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/development.aev.py\n+Vlib/python3/dist-packages/mmtbx/command_line/validation_summary.py\n p3253\n sbsg0\n (g17\n g2\n Ntp3254\n Rp3255\n (dp3256\n g21\n g23\n sg26\n-Vbin/phenix.chiral_validation\n+Vbin/phenix.cbetadev\n p3257\n sbg0\n (g17\n g2\n Ntp3258\n Rp3259\n (dp3260\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/chiral_validation.py\n+Vlib/python3/dist-packages/mmtbx/command_line/cbetadev.py\n p3261\n sbsg0\n (g17\n g2\n Ntp3262\n Rp3263\n (dp3264\n g21\n g23\n sg26\n-Vbin/molprobity.chiral_validation\n+Vbin/molprobity.cbetadev\n p3265\n sbg0\n (g17\n g2\n Ntp3266\n Rp3267\n (dp3268\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/chiral_validation.py\n+Vlib/python3/dist-packages/mmtbx/command_line/cbetadev.py\n p3269\n sbsg0\n (g17\n g2\n Ntp3270\n Rp3271\n (dp3272\n g21\n g23\n sg26\n-Vbin/phenix.fetch_pdb\n+Vbin/mmtbx.mp_geo\n p3273\n sbg0\n (g17\n g2\n Ntp3274\n Rp3275\n (dp3276\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/fetch_pdb.py\n+Vlib/python3/dist-packages/mmtbx/command_line/mp_geo.py\n p3277\n sbsg0\n (g17\n g2\n Ntp3278\n Rp3279\n (dp3280\n g21\n g23\n sg26\n-Vbin/iotbx.fetch_pdb\n+Vbin/phenix.secondary_structure_validation\n p3281\n sbg0\n (g17\n g2\n Ntp3282\n Rp3283\n (dp3284\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/fetch_pdb.py\n+Vlib/python3/dist-packages/mmtbx/command_line/secondary_structure_validation.py\n p3285\n sbsg0\n (g17\n g2\n Ntp3286\n Rp3287\n (dp3288\n g21\n g23\n sg26\n-Vbin/phenix.cc_star\n+Vbin/mmtbx.quantum_interface\n p3289\n sbg0\n (g17\n g2\n Ntp3290\n Rp3291\n (dp3292\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/cc_star.py\n+Vlib/python3/dist-packages/mmtbx/command_line/quantum_interface.py\n p3293\n sbsg0\n (g17\n g2\n Ntp3294\n Rp3295\n (dp3296\n g21\n g23\n sg26\n-Vbin/mmtbx.refine_anomalous_substructure\n+Vbin/phenix.r_factor_statistics\n p3297\n sbg0\n (g17\n g2\n Ntp3298\n Rp3299\n (dp3300\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/refine_anomalous_substructure.py\n+Vlib/python3/dist-packages/mmtbx/command_line/r_factor_statistics.py\n p3301\n sbsg0\n (g17\n g2\n Ntp3302\n Rp3303\n (dp3304\n g21\n g23\n sg26\n-Vbin/phenix.remove_outliers\n+Vbin/mmtbx.arginine_geometry\n p3305\n sbg0\n (g17\n g2\n Ntp3306\n Rp3307\n (dp3308\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/remove_outliers.py\n+Vlib/python3/dist-packages/mmtbx/command_line/arginine_geometry.py\n p3309\n sbsg0\n (g17\n g2\n Ntp3310\n Rp3311\n (dp3312\n g21\n g23\n sg26\n-Vbin/phenix.tls_as_xyz\n+Vbin/mmtbx.altloc_remediate\n p3313\n sbg0\n (g17\n g2\n Ntp3314\n Rp3315\n (dp3316\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/tls_as_xyz.py\n+Vlib/python3/dist-packages/mmtbx/command_line/altloc_remediate.py\n p3317\n sbsg0\n (g17\n g2\n Ntp3318\n Rp3319\n (dp3320\n g21\n g23\n sg26\n-Vbin/mmtbx.density_modification\n+Vbin/mmtbx.development.water_b_factors\n p3321\n sbg0\n (g17\n g2\n Ntp3322\n Rp3323\n (dp3324\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/density_modification.py\n+Vlib/python3/dist-packages/mmtbx/command_line/water_b_factors.py\n p3325\n sbsg0\n (g17\n g2\n Ntp3326\n Rp3327\n (dp3328\n g21\n g23\n sg26\n-Vbin/phenix.real_space_correlation\n+Vbin/molprobity.probescore_ligand\n p3329\n sbg0\n (g17\n g2\n Ntp3330\n Rp3331\n (dp3332\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/real_space_correlation.py\n+Vlib/python3/dist-packages/mmtbx/command_line/probescore_ligand.py\n p3333\n sbsg0\n (g17\n g2\n Ntp3334\n Rp3335\n (dp3336\n g21\n g23\n sg26\n-Vbin/phenix.barbed_wire_analysis\n+Vbin/mmtbx.matthews\n p3337\n sbg0\n (g17\n g2\n Ntp3338\n Rp3339\n (dp3340\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/barbed_wire_analysis.py\n+Vlib/python3/dist-packages/mmtbx/command_line/matthews.py\n p3341\n sbsg0\n (g17\n g2\n Ntp3342\n Rp3343\n (dp3344\n g21\n g23\n sg26\n-Vbin/molprobity.barbed_wire_analysis\n+Vbin/mmtbx.massage_data\n p3345\n sbg0\n (g17\n g2\n Ntp3346\n Rp3347\n (dp3348\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/barbed_wire_analysis.py\n+Vlib/python3/dist-packages/mmtbx/command_line/massage_data.py\n p3349\n sbsg0\n (g17\n g2\n Ntp3350\n Rp3351\n (dp3352\n g21\n g23\n sg26\n-Vbin/mmtbx.arginine_geometry\n+Vbin/phenix.chiral_validation\n p3353\n sbg0\n (g17\n g2\n Ntp3354\n Rp3355\n (dp3356\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/arginine_geometry.py\n+Vlib/python3/dist-packages/mmtbx/command_line/chiral_validation.py\n p3357\n sbsg0\n (g17\n g2\n Ntp3358\n Rp3359\n (dp3360\n g21\n g23\n sg26\n-Vbin/mmtbx.process_predicted_model\n+Vbin/molprobity.chiral_validation\n p3361\n sbg0\n (g17\n g2\n Ntp3362\n Rp3363\n (dp3364\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/process_predicted_model.py\n+Vlib/python3/dist-packages/mmtbx/command_line/chiral_validation.py\n p3365\n sbsg0\n (g17\n g2\n Ntp3366\n Rp3367\n (dp3368\n g21\n g23\n sg26\n-Vbin/phenix.process_predicted_model\n+Vbin/mmtbx.reduce2\n p3369\n sbg0\n (g17\n g2\n Ntp3370\n Rp3371\n (dp3372\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/process_predicted_model.py\n+Vlib/python3/dist-packages/mmtbx/command_line/reduce2.py\n p3373\n sbsg0\n (g17\n g2\n Ntp3374\n Rp3375\n (dp3376\n g21\n g23\n sg26\n-Vbin/mmtbx.ringer\n+Vbin/phenix.rotalyze\n p3377\n sbg0\n (g17\n g2\n Ntp3378\n Rp3379\n (dp3380\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/ringer.py\n+Vlib/python3/dist-packages/mmtbx/command_line/rotalyze.py\n p3381\n sbsg0\n (g17\n g2\n Ntp3382\n Rp3383\n (dp3384\n g21\n g23\n sg26\n-Vbin/phenix.models_as_chains\n+Vbin/molprobity.rotalyze\n p3385\n sbg0\n (g17\n g2\n Ntp3386\n Rp3387\n (dp3388\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/models_as_chains.py\n+Vlib/python3/dist-packages/mmtbx/command_line/rotalyze.py\n p3389\n sbsg0\n (g17\n g2\n Ntp3390\n Rp3391\n (dp3392\n g21\n g23\n sg26\n-Vbin/phenix.cablam_training\n+Vbin/phenix.sort_hetatms\n p3393\n sbg0\n (g17\n g2\n Ntp3394\n Rp3395\n (dp3396\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/cablam_training.py\n+Vlib/python3/dist-packages/mmtbx/command_line/sort_hetatms.py\n p3397\n sbsg0\n (g17\n g2\n Ntp3398\n Rp3399\n (dp3400\n g21\n g23\n sg26\n-Vbin/phenix.f000\n+Vbin/mmtbx.show_r_factors_by_shell\n p3401\n sbg0\n (g17\n g2\n Ntp3402\n Rp3403\n (dp3404\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/f000.py\n+Vlib/python3/dist-packages/mmtbx/command_line/show_r_factors_by_shell.py\n p3405\n sbsg0\n (g17\n g2\n Ntp3406\n Rp3407\n (dp3408\n g21\n g23\n sg26\n-Vbin/phenix.map_to_structure_factors\n+Vbin/mmtbx.refine_anomalous_substructure\n p3409\n sbg0\n (g17\n g2\n Ntp3410\n Rp3411\n (dp3412\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/map_to_structure_factors.py\n+Vlib/python3/dist-packages/mmtbx/command_line/refine_anomalous_substructure.py\n p3413\n sbsg0\n (g17\n g2\n Ntp3414\n Rp3415\n (dp3416\n g21\n g23\n sg26\n-Vbin/phenix.suitename_old\n+Vbin/phenix.tls_analysis\n p3417\n sbg0\n (g17\n g2\n Ntp3418\n Rp3419\n (dp3420\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/suitename_old.py\n+Vlib/python3/dist-packages/mmtbx/command_line/tls_analysis.py\n p3421\n sbsg0\n (g17\n g2\n Ntp3422\n Rp3423\n (dp3424\n g21\n g23\n sg26\n-Vbin/molprobity.suitename_old\n+Vbin/phenix.map_to_model_histogram\n p3425\n sbg0\n (g17\n g2\n Ntp3426\n Rp3427\n (dp3428\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/suitename_old.py\n+Vlib/python3/dist-packages/mmtbx/command_line/map_to_model_histogram.py\n p3429\n sbsg0\n (g17\n g2\n Ntp3430\n Rp3431\n (dp3432\n g21\n g23\n sg26\n-Vbin/cctbx.suitename_old\n+Vbin/mmtbx.estimate_bijvoet_ratio\n p3433\n sbg0\n (g17\n g2\n Ntp3434\n Rp3435\n (dp3436\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/suitename_old.py\n+Vlib/python3/dist-packages/mmtbx/command_line/estimate_bijvoet_ratio.py\n p3437\n sbsg0\n (g17\n g2\n Ntp3438\n Rp3439\n (dp3440\n g21\n g23\n sg26\n-Vbin/mmtbx.model_vs_data\n+Vbin/phenix.f000\n p3441\n sbg0\n (g17\n g2\n Ntp3442\n Rp3443\n (dp3444\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/model_vs_data.py\n+Vlib/python3/dist-packages/mmtbx/command_line/f000.py\n p3445\n sbsg0\n (g17\n g2\n Ntp3446\n Rp3447\n (dp3448\n g21\n g23\n sg26\n-Vbin/phenix.mtz2map\n+Vbin/mmtbx.verify_mon_lib_data\n p3449\n sbg0\n (g17\n g2\n Ntp3450\n Rp3451\n (dp3452\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/mtz2map.py\n+Vlib/python3/dist-packages/mmtbx/command_line/verify_mon_lib_data.py\n p3453\n sbsg0\n (g17\n g2\n Ntp3454\n Rp3455\n (dp3456\n g21\n g23\n sg26\n-Vbin/phenix.fft\n+Vbin/phenix.cif_as_mtz\n p3457\n sbg0\n (g17\n g2\n Ntp3458\n Rp3459\n (dp3460\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/mtz2map.py\n+Vlib/python3/dist-packages/mmtbx/command_line/cif_as_mtz.py\n p3461\n sbsg0\n (g17\n g2\n Ntp3462\n Rp3463\n (dp3464\n g21\n g23\n sg26\n-Vbin/mmtbx.fft\n+Vbin/iotbx.cif_as_mtz\n p3465\n sbg0\n (g17\n g2\n Ntp3466\n Rp3467\n (dp3468\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/mtz2map.py\n+Vlib/python3/dist-packages/mmtbx/command_line/cif_as_mtz.py\n p3469\n sbsg0\n (g17\n g2\n Ntp3470\n Rp3471\n (dp3472\n g21\n g23\n sg26\n-Vbin/phenix.xtriage\n+Vbin/phenix.holton_geometry_validation\n p3473\n sbg0\n (g17\n g2\n Ntp3474\n Rp3475\n (dp3476\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/xtriage.py\n+Vlib/python3/dist-packages/mmtbx/command_line/holton_geometry_validation.py\n p3477\n sbsg0\n (g17\n g2\n Ntp3478\n Rp3479\n (dp3480\n g21\n g23\n sg26\n-Vbin/mmtbx.xtriage\n+Vbin/mmtbx.holton_geometry_validation\n p3481\n sbg0\n (g17\n g2\n Ntp3482\n Rp3483\n (dp3484\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/xtriage.py\n+Vlib/python3/dist-packages/mmtbx/command_line/holton_geometry_validation.py\n p3485\n sbsg0\n (g17\n g2\n Ntp3486\n Rp3487\n (dp3488\n g21\n g23\n sg26\n-Vbin/mmtbx.hydrogenate\n+Vbin/mmtbx.rebuild_rotarama_cache\n p3489\n sbg0\n (g17\n g2\n Ntp3490\n Rp3491\n (dp3492\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/hydrogenate.py\n+Vlib/python3/dist-packages/mmtbx/command_line/rebuild_rotarama_cache.py\n p3493\n sbsg0\n (g17\n g2\n Ntp3494\n Rp3495\n (dp3496\n g21\n g23\n sg26\n-Vbin/phenix.fem\n+Vbin/mmtbx.search_pdb_symmetry\n p3497\n sbg0\n (g17\n g2\n Ntp3498\n Rp3499\n (dp3500\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/development_fem.py\n+Vlib/python3/dist-packages/mmtbx/command_line/search_pdb_symmetry.py\n p3501\n sbsg0\n (g17\n g2\n Ntp3502\n Rp3503\n (dp3504\n g21\n g23\n sg26\n-Vbin/phenix.feature_enhanced_map\n+Vbin/phenix.clashscore2\n p3505\n sbg0\n (g17\n g2\n Ntp3506\n Rp3507\n (dp3508\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/development_fem.py\n+Vlib/python3/dist-packages/mmtbx/command_line/clashscore2.py\n p3509\n sbsg0\n (g17\n g2\n Ntp3510\n Rp3511\n (dp3512\n g21\n g23\n sg26\n-Vbin/phenix.hbond\n+Vbin/molprobity.clashscore2\n p3513\n sbg0\n (g17\n g2\n Ntp3514\n Rp3515\n (dp3516\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/hbond.py\n+Vlib/python3/dist-packages/mmtbx/command_line/clashscore2.py\n p3517\n sbsg0\n (g17\n g2\n Ntp3518\n Rp3519\n (dp3520\n g21\n g23\n sg26\n-Vbin/phenix.real_space_diff_map\n+Vbin/mmtbx.clashscore2\n p3521\n sbg0\n (g17\n g2\n Ntp3522\n Rp3523\n (dp3524\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/real_space_diff_map.py\n+Vlib/python3/dist-packages/mmtbx/command_line/clashscore2.py\n p3525\n sbsg0\n (g17\n g2\n Ntp3526\n Rp3527\n (dp3528\n g21\n g23\n sg26\n-Vbin/phenix.find_peaks_holes\n+Vbin/mmtbx.prune_model\n p3529\n sbg0\n (g17\n g2\n Ntp3530\n Rp3531\n (dp3532\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/find_peaks_holes.py\n+Vlib/python3/dist-packages/mmtbx/command_line/prune_model.py\n p3533\n sbsg0\n (g17\n g2\n Ntp3534\n Rp3535\n (dp3536\n g21\n g23\n sg26\n-Vbin/mmtbx.find_peaks_holes\n+Vbin/phenix.rna_validate_bonds\n p3537\n sbg0\n (g17\n g2\n Ntp3538\n Rp3539\n (dp3540\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/find_peaks_holes.py\n+Vlib/python3/dist-packages/mmtbx/command_line/rna_validate_bonds.py\n p3541\n sbsg0\n (g17\n g2\n Ntp3542\n Rp3543\n (dp3544\n g21\n g23\n sg26\n-Vbin/mmtbx.emringer_score\n+Vbin/molprobity.rna_validate_bonds\n p3545\n sbg0\n (g17\n g2\n Ntp3546\n Rp3547\n (dp3548\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/emringer_score.py\n+Vlib/python3/dist-packages/mmtbx/command_line/rna_validate_bonds.py\n p3549\n sbsg0\n (g17\n g2\n Ntp3550\n Rp3551\n (dp3552\n g21\n g23\n sg26\n-Vbin/phenix.perigee\n+Vbin/phenix.model_vs_map\n p3553\n sbg0\n (g17\n g2\n Ntp3554\n Rp3555\n (dp3556\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/perigee.py\n+Vlib/python3/dist-packages/mmtbx/command_line/model_vs_map.py\n p3557\n sbsg0\n (g17\n g2\n Ntp3558\n Rp3559\n (dp3560\n g21\n g23\n sg26\n-Vbin/phenix.tls\n+Vbin/phenix.polder\n p3561\n sbg0\n (g17\n g2\n Ntp3562\n Rp3563\n (dp3564\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/tls.py\n+Vlib/python3/dist-packages/mmtbx/command_line/polder.py\n p3565\n sbsg0\n (g17\n g2\n Ntp3566\n Rp3567\n (dp3568\n g21\n g23\n sg26\n-Vbin/mmtbx.distance_difference\n+Vbin/phenix.geometry_minimization\n p3569\n sbg0\n (g17\n g2\n Ntp3570\n Rp3571\n (dp3572\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/distance_difference.py\n+Vlib/python3/dist-packages/mmtbx/command_line/geometry_minimization.py\n p3573\n sbsg0\n (g17\n g2\n Ntp3574\n Rp3575\n (dp3576\n g21\n g23\n sg26\n-Vbin/mmtbx.select_best_starting_model\n+Vbin/mmtbx.mon_lib_cif_triage\n p3577\n sbg0\n (g17\n g2\n Ntp3578\n Rp3579\n (dp3580\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/select_best_starting_model.py\n+Vlib/python3/dist-packages/mmtbx/command_line/mon_lib_cif_triage.py\n p3581\n sbsg0\n (g17\n g2\n Ntp3582\n Rp3583\n (dp3584\n g21\n g23\n sg26\n-Vbin/phenix.map_comparison\n+Vbin/phenix.angle\n p3585\n sbg0\n (g17\n g2\n Ntp3586\n Rp3587\n (dp3588\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/map_comparison.py\n+Vlib/python3/dist-packages/mmtbx/command_line/angle.py\n p3589\n sbsg0\n (g17\n g2\n Ntp3590\n Rp3591\n (dp3592\n g21\n g23\n sg26\n-Vbin/phenix.validate_H\n+Vbin/phenix.rna_validate_puckers\n p3593\n sbg0\n (g17\n g2\n Ntp3594\n Rp3595\n (dp3596\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/validate_H_cl_app.py\n+Vlib/python3/dist-packages/mmtbx/command_line/rna_validate_puckers.py\n p3597\n sbsg0\n (g17\n g2\n Ntp3598\n Rp3599\n (dp3600\n g21\n g23\n sg26\n-Vbin/mmtbx.ss_idealization\n+Vbin/molprobity.rna_validate_puckers\n p3601\n sbg0\n (g17\n g2\n Ntp3602\n Rp3603\n (dp3604\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/ss_idealization.py\n+Vlib/python3/dist-packages/mmtbx/command_line/rna_validate_puckers.py\n p3605\n sbsg0\n (g17\n g2\n Ntp3606\n Rp3607\n (dp3608\n g21\n g23\n sg26\n-Vbin/phenix.ramalyze\n+Vbin/phenix.cc_star\n p3609\n sbg0\n (g17\n g2\n Ntp3610\n Rp3611\n (dp3612\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/ramalyze.py\n+Vlib/python3/dist-packages/mmtbx/command_line/cc_star.py\n p3613\n sbsg0\n (g17\n g2\n Ntp3614\n Rp3615\n (dp3616\n g21\n g23\n sg26\n-Vbin/molprobity.ramalyze\n+Vbin/phenix.find_tls_groups\n p3617\n sbg0\n (g17\n g2\n Ntp3618\n Rp3619\n (dp3620\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/ramalyze.py\n+Vlib/python3/dist-packages/mmtbx/command_line/find_tls_groups.py\n p3621\n sbsg0\n (g17\n g2\n Ntp3622\n Rp3623\n (dp3624\n g21\n g23\n sg26\n-Vbin/phenix.maximum_entropy_map\n+Vbin/phenix.suitename\n p3625\n sbg0\n (g17\n g2\n Ntp3626\n Rp3627\n (dp3628\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/maximum_entropy_map.py\n+Vlib/python3/dist-packages/mmtbx/command_line/suitename.py\n p3629\n sbsg0\n (g17\n g2\n Ntp3630\n Rp3631\n (dp3632\n g21\n g23\n sg26\n-Vbin/phenix.helix_sheet_recs_as_pdb_files\n+Vbin/molprobity.suitename\n p3633\n sbg0\n (g17\n g2\n Ntp3634\n Rp3635\n (dp3636\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/helix_sheet_recs_as_pdb_files.py\n+Vlib/python3/dist-packages/mmtbx/command_line/suitename.py\n p3637\n sbsg0\n (g17\n g2\n Ntp3638\n Rp3639\n (dp3640\n g21\n g23\n sg26\n-Vbin/mmtbx.mon_lib_cif_triage\n+Vbin/cctbx.suitename\n p3641\n sbg0\n (g17\n g2\n Ntp3642\n Rp3643\n (dp3644\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/mon_lib_cif_triage.py\n+Vlib/python3/dist-packages/mmtbx/command_line/suitename.py\n p3645\n sbsg0\n (g17\n g2\n Ntp3646\n Rp3647\n (dp3648\n g21\n g23\n sg26\n-Vbin/phenix.undowser_validation\n+Vbin/phenix.omegalyze\n p3649\n sbg0\n (g17\n g2\n Ntp3650\n Rp3651\n (dp3652\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/undowser.py\n+Vlib/python3/dist-packages/mmtbx/command_line/omegalyze.py\n p3653\n sbsg0\n (g17\n g2\n Ntp3654\n Rp3655\n (dp3656\n g21\n g23\n sg26\n-Vbin/molprobity.undowser_validation\n+Vbin/molprobity.omegalyze\n p3657\n sbg0\n (g17\n g2\n Ntp3658\n Rp3659\n (dp3660\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/undowser.py\n+Vlib/python3/dist-packages/mmtbx/command_line/omegalyze.py\n p3661\n sbsg0\n (g17\n g2\n Ntp3662\n Rp3663\n (dp3664\n g21\n g23\n sg26\n-Vbin/phenix.geometry_minimization\n+Vbin/phenix.cablam_validate\n p3665\n sbg0\n (g17\n g2\n Ntp3666\n Rp3667\n (dp3668\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/geometry_minimization.py\n+Vlib/python3/dist-packages/mmtbx/command_line/cablam_validate.py\n p3669\n sbsg0\n (g17\n g2\n Ntp3670\n Rp3671\n (dp3672\n g21\n g23\n sg26\n-Vbin/phenix.fobs_minus_fobs_map\n+Vbin/phenix.fmodel\n p3673\n sbg0\n (g17\n g2\n Ntp3674\n Rp3675\n (dp3676\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/fobs_minus_fobs_map.py\n+Vlib/python3/dist-packages/mmtbx/command_line/fmodel.py\n p3677\n sbsg0\n (g17\n g2\n Ntp3678\n Rp3679\n (dp3680\n g21\n g23\n sg26\n-Vbin/phenix.model_model_distances\n+Vbin/mmtbx.distance_difference\n p3681\n sbg0\n (g17\n g2\n Ntp3682\n Rp3683\n (dp3684\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/model_model_distances.py\n+Vlib/python3/dist-packages/mmtbx/command_line/distance_difference.py\n p3685\n sbsg0\n (g17\n g2\n Ntp3686\n Rp3687\n (dp3688\n g21\n g23\n sg26\n-Vbin/phenix.model_idealization\n+Vbin/phenix.secondary_structure_restraints\n p3689\n sbg0\n (g17\n g2\n Ntp3690\n Rp3691\n (dp3692\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/model_idealization.py\n+Vlib/python3/dist-packages/mmtbx/command_line/secondary_structure_restraints.py\n p3693\n sbsg0\n (g17\n g2\n Ntp3694\n Rp3695\n (dp3696\n g21\n g23\n sg26\n-Vbin/phenix.pdb_atom_selection\n+Vbin/phenix.cablam_training\n p3697\n sbg0\n (g17\n g2\n Ntp3698\n Rp3699\n (dp3700\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/pdb_atom_selection.py\n+Vlib/python3/dist-packages/mmtbx/command_line/cablam_training.py\n p3701\n sbsg0\n (g17\n g2\n Ntp3702\n Rp3703\n (dp3704\n g21\n g23\n sg26\n-Vbin/phenix.rotalyze\n+Vbin/phenix.xtriage\n p3705\n sbg0\n (g17\n g2\n Ntp3706\n Rp3707\n (dp3708\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/rotalyze.py\n+Vlib/python3/dist-packages/mmtbx/command_line/xtriage.py\n p3709\n sbsg0\n (g17\n g2\n Ntp3710\n Rp3711\n (dp3712\n g21\n g23\n sg26\n-Vbin/molprobity.rotalyze\n+Vbin/mmtbx.xtriage\n p3713\n sbg0\n (g17\n g2\n Ntp3714\n Rp3715\n (dp3716\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/rotalyze.py\n+Vlib/python3/dist-packages/mmtbx/command_line/xtriage.py\n p3717\n sbsg0\n (g17\n g2\n Ntp3718\n Rp3719\n (dp3720\n g21\n g23\n sg26\n-Vbin/mmtbx.development.electrons\n+Vbin/mmtbx.ringer\n p3721\n sbg0\n (g17\n g2\n Ntp3722\n Rp3723\n (dp3724\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/electrons.py\n+Vlib/python3/dist-packages/mmtbx/command_line/ringer.py\n p3725\n sbsg0\n (g17\n g2\n Ntp3726\n Rp3727\n (dp3728\n g21\n g23\n sg26\n-Vbin/phenix.cablam\n+Vbin/phenix.kinemage\n p3729\n sbg0\n (g17\n g2\n Ntp3730\n Rp3731\n (dp3732\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/cablam.py\n+Vlib/python3/dist-packages/mmtbx/command_line/kinemage.py\n p3733\n sbsg0\n (g17\n g2\n Ntp3734\n Rp3735\n (dp3736\n g21\n g23\n sg26\n-Vbin/molprobity.cablam\n+Vbin/molprobity.kinemage\n p3737\n sbg0\n (g17\n g2\n Ntp3738\n Rp3739\n (dp3740\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/cablam.py\n+Vlib/python3/dist-packages/mmtbx/command_line/kinemage.py\n p3741\n sbsg0\n (g17\n g2\n Ntp3742\n Rp3743\n (dp3744\n g21\n g23\n sg26\n-Vbin/mmtbx.matthews\n+Vbin/mmtbx.ss_idealization\n p3745\n sbg0\n (g17\n g2\n Ntp3746\n Rp3747\n (dp3748\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/matthews.py\n+Vlib/python3/dist-packages/mmtbx/command_line/ss_idealization.py\n p3749\n sbsg0\n (g17\n g2\n Ntp3750\n Rp3751\n (dp3752\n g21\n g23\n sg26\n-Vbin/phenix.undowser2_validation\n+Vbin/phenix.map_to_structure_factors\n p3753\n sbg0\n (g17\n g2\n Ntp3754\n Rp3755\n (dp3756\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/undowser2.py\n+Vlib/python3/dist-packages/mmtbx/command_line/map_to_structure_factors.py\n p3757\n sbsg0\n (g17\n g2\n Ntp3758\n Rp3759\n (dp3760\n g21\n g23\n sg26\n-Vbin/mmtbx.undowser2_validation\n+Vbin/phenix.maps\n p3761\n sbg0\n (g17\n g2\n Ntp3762\n Rp3763\n (dp3764\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/undowser2.py\n+Vlib/python3/dist-packages/mmtbx/command_line/maps.py\n p3765\n sbsg0\n (g17\n g2\n Ntp3766\n Rp3767\n (dp3768\n g21\n g23\n sg26\n-Vbin/molprobity.undowser2_validation\n+Vbin/phenix.dynamics\n p3769\n sbg0\n (g17\n g2\n Ntp3770\n Rp3771\n (dp3772\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/undowser2.py\n+Vlib/python3/dist-packages/mmtbx/command_line/dynamics.py\n p3773\n sbsg0\n (g17\n g2\n Ntp3774\n Rp3775\n (dp3776\n g21\n g23\n sg26\n-Vbin/phenix.rna_validate\n+Vbin/phenix.real_space_correlation\n p3777\n sbg0\n (g17\n g2\n Ntp3778\n Rp3779\n (dp3780\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/rna_validate.py\n+Vlib/python3/dist-packages/mmtbx/command_line/real_space_correlation.py\n p3781\n sbsg0\n (g17\n g2\n Ntp3782\n Rp3783\n (dp3784\n g21\n g23\n sg26\n-Vbin/molprobity.rna_validate\n+Vbin/mmtbx.select_best_starting_model\n p3785\n sbg0\n (g17\n g2\n Ntp3786\n Rp3787\n (dp3788\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/rna_validate.py\n+Vlib/python3/dist-packages/mmtbx/command_line/select_best_starting_model.py\n p3789\n sbsg0\n (g17\n g2\n Ntp3790\n Rp3791\n (dp3792\n g21\n g23\n sg26\n-Vbin/mmtbx.validation_summary\n+Vbin/mmtbx.emringer_score\n p3793\n sbg0\n (g17\n g2\n Ntp3794\n Rp3795\n (dp3796\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/validation_summary.py\n+Vlib/python3/dist-packages/mmtbx/command_line/emringer_score.py\n p3797\n sbsg0\n (g17\n g2\n Ntp3798\n Rp3799\n (dp3800\n g21\n g23\n sg26\n-Vbin/phenix.grow_density\n+Vbin/phenix.map_comparison\n p3801\n sbg0\n (g17\n g2\n Ntp3802\n Rp3803\n (dp3804\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/grow_density.py\n+Vlib/python3/dist-packages/mmtbx/command_line/map_comparison.py\n p3805\n sbsg0\n (g17\n g2\n Ntp3806\n Rp3807\n (dp3808\n g21\n g23\n sg26\n-Vbin/phenix.model_map\n+Vbin/phenix.hbond\n p3809\n sbg0\n (g17\n g2\n Ntp3810\n Rp3811\n (dp3812\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/model_map.py\n+Vlib/python3/dist-packages/mmtbx/command_line/hbond.py\n p3813\n sbsg0\n (g17\n g2\n Ntp3814\n Rp3815\n (dp3816\n g21\n g23\n sg26\n-Vbin/mmtbx.rebuild_rotarama_cache\n+Vbin/phenix.tls_as_xyz\n p3817\n sbg0\n (g17\n g2\n Ntp3818\n Rp3819\n (dp3820\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/rebuild_rotarama_cache.py\n+Vlib/python3/dist-packages/mmtbx/command_line/tls_as_xyz.py\n p3821\n sbsg0\n (g17\n g2\n Ntp3822\n Rp3823\n (dp3824\n g21\n g23\n sg26\n-Vbin/mmtbx.probe2\n+Vbin/phenix.maximum_entropy_map\n p3825\n sbg0\n (g17\n g2\n Ntp3826\n Rp3827\n (dp3828\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/probe2.py\n+Vlib/python3/dist-packages/mmtbx/command_line/maximum_entropy_map.py\n p3829\n sbsg0\n (g17\n g2\n Ntp3830\n Rp3831\n (dp3832\n g21\n g23\n sg26\n-Vbin/mmtbx.plan_sad_experiment\n+Vbin/mmtbx.model_vs_data\n p3833\n sbg0\n (g17\n g2\n Ntp3834\n Rp3835\n (dp3836\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/plan_sad_experiment.py\n+Vlib/python3/dist-packages/mmtbx/command_line/model_vs_data.py\n p3837\n sbsg0\n (g17\n g2\n Ntp3838\n Rp3839\n (dp3840\n g21\n g23\n sg26\n-Vbin/phenix.find_tls_groups\n+Vbin/phenix.map_box\n p3841\n sbg0\n (g17\n g2\n Ntp3842\n Rp3843\n (dp3844\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/find_tls_groups.py\n+Vlib/python3/dist-packages/mmtbx/command_line/map_box.py\n p3845\n sbsg0\n (g17\n g2\n Ntp3846\n Rp3847\n (dp3848\n g21\n g23\n sg26\n-Vbin/mmtbx.development.water_b_factors\n+Vbin/phenix.cablam\n p3849\n sbg0\n (g17\n g2\n Ntp3850\n Rp3851\n (dp3852\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/water_b_factors.py\n+Vlib/python3/dist-packages/mmtbx/command_line/cablam.py\n p3853\n sbsg0\n (g17\n g2\n Ntp3854\n Rp3855\n (dp3856\n g21\n g23\n sg26\n-Vbin/mmtbx.quantum_interface\n+Vbin/molprobity.cablam\n p3857\n sbg0\n (g17\n g2\n Ntp3858\n Rp3859\n (dp3860\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/quantum_interface.py\n+Vlib/python3/dist-packages/mmtbx/command_line/cablam.py\n p3861\n sbsg0\n (g17\n g2\n Ntp3862\n Rp3863\n (dp3864\n g21\n g23\n sg26\n-Vbin/mmtbx.development.validate_ligands\n+Vbin/mmtbx.rigid_bond_test\n p3865\n sbg0\n (g17\n g2\n Ntp3866\n Rp3867\n (dp3868\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/validate_ligands.py\n+Vlib/python3/dist-packages/mmtbx/command_line/rigid_bond_test.py\n p3869\n sbsg0\n (g17\n g2\n Ntp3870\n Rp3871\n (dp3872\n g21\n g23\n sg26\n-Vbin/mmtbx.superpose\n+Vbin/mmtbx.table_one\n p3873\n sbg0\n (g17\n g2\n Ntp3874\n Rp3875\n (dp3876\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/superpose.py\n+Vlib/python3/dist-packages/mmtbx/command_line/table_one.py\n p3877\n sbsg0\n (g17\n g2\n Ntp3878\n Rp3879\n (dp3880\n g21\n g23\n sg26\n-Vbin/mmtbx.find_residue_in_pdb\n+Vbin/phenix.grow_density\n p3881\n sbg0\n (g17\n g2\n Ntp3882\n Rp3883\n (dp3884\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/find_residue_in_pdb.py\n+Vlib/python3/dist-packages/mmtbx/command_line/grow_density.py\n p3885\n sbsg0\n (g17\n g2\n Ntp3886\n Rp3887\n (dp3888\n g21\n g23\n sg26\n-Vbin/phenix.fab_elbow_angle\n+Vbin/phenix.fetch_pdb\n p3889\n sbg0\n (g17\n g2\n Ntp3890\n Rp3891\n (dp3892\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/fab_elbow_angle.py\n+Vlib/python3/dist-packages/mmtbx/command_line/fetch_pdb.py\n p3893\n sbsg0\n (g17\n g2\n Ntp3894\n Rp3895\n (dp3896\n g21\n g23\n sg26\n-Vbin/molprobity.probescore_ligand\n+Vbin/iotbx.fetch_pdb\n p3897\n sbg0\n (g17\n g2\n Ntp3898\n Rp3899\n (dp3900\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/probescore_ligand.py\n+Vlib/python3/dist-packages/mmtbx/command_line/fetch_pdb.py\n p3901\n sbsg0\n (g17\n g2\n Ntp3902\n Rp3903\n (dp3904\n g21\n g23\n sg26\n-Vbin/phenix.r_factor_statistics\n+Vbin/mmtbx.rama_z\n p3905\n sbg0\n (g17\n g2\n Ntp3906\n Rp3907\n (dp3908\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/r_factor_statistics.py\n+Vlib/python3/dist-packages/mmtbx/command_line/rama_z.py\n p3909\n sbsg0\n (g17\n g2\n Ntp3910\n Rp3911\n (dp3912\n g21\n g23\n sg26\n-Vbin/phenix.rank_scale_map\n+Vbin/phenix.rama_z\n p3913\n sbg0\n (g17\n g2\n Ntp3914\n Rp3915\n (dp3916\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/rank_scale_map.py\n+Vlib/python3/dist-packages/mmtbx/command_line/rama_z.py\n p3917\n sbsg0\n (g17\n g2\n Ntp3918\n Rp3919\n (dp3920\n g21\n g23\n sg26\n-Vbin/phenix.clashscore\n+Vbin/phenix.fem\n p3921\n sbg0\n (g17\n g2\n Ntp3922\n Rp3923\n (dp3924\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/clashscore.py\n+Vlib/python3/dist-packages/mmtbx/command_line/development_fem.py\n p3925\n sbsg0\n (g17\n g2\n Ntp3926\n Rp3927\n (dp3928\n g21\n g23\n sg26\n-Vbin/molprobity.clashscore\n+Vbin/phenix.feature_enhanced_map\n p3929\n sbg0\n (g17\n g2\n Ntp3930\n Rp3931\n (dp3932\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/clashscore.py\n+Vlib/python3/dist-packages/mmtbx/command_line/development_fem.py\n p3933\n sbsg0\n (g17\n g2\n Ntp3934\n Rp3935\n (dp3936\n g21\n g23\n sg26\n-Vbin/phenix.cif_as_mtz\n+Vbin/phenix.sisa\n p3937\n sbg0\n (g17\n g2\n Ntp3938\n Rp3939\n (dp3940\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/cif_as_mtz.py\n+Vlib/python3/dist-packages/mmtbx/command_line/sisa.py\n p3941\n sbsg0\n (g17\n g2\n Ntp3942\n Rp3943\n (dp3944\n g21\n g23\n sg26\n-Vbin/iotbx.cif_as_mtz\n+Vbin/phenix.suitename_old\n p3945\n sbg0\n (g17\n g2\n Ntp3946\n Rp3947\n (dp3948\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/cif_as_mtz.py\n+Vlib/python3/dist-packages/mmtbx/command_line/suitename_old.py\n p3949\n sbsg0\n (g17\n g2\n Ntp3950\n Rp3951\n (dp3952\n g21\n g23\n sg26\n-Vbin/mmtbx.nonbonded_overlaps\n+Vbin/molprobity.suitename_old\n p3953\n sbg0\n (g17\n g2\n Ntp3954\n Rp3955\n (dp3956\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/nonbonded_overlaps.py\n+Vlib/python3/dist-packages/mmtbx/command_line/suitename_old.py\n p3957\n sbsg0\n (g17\n g2\n Ntp3958\n Rp3959\n (dp3960\n g21\n g23\n sg26\n-Vbin/mmtbx.table_one\n+Vbin/cctbx.suitename_old\n p3961\n sbg0\n (g17\n g2\n Ntp3962\n Rp3963\n (dp3964\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/table_one.py\n+Vlib/python3/dist-packages/mmtbx/command_line/suitename_old.py\n p3965\n sbsg0\n (g17\n g2\n Ntp3966\n Rp3967\n (dp3968\n g21\n g23\n sg26\n-Vbin/phenix.maps\n+Vbin/phenix.fobs_minus_fobs_map\n p3969\n sbg0\n (g17\n g2\n Ntp3970\n Rp3971\n (dp3972\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/mmtbx/command_line/maps.py\n+Vlib/python3/dist-packages/mmtbx/command_line/fobs_minus_fobs_map.py\n p3973\n sbsg0\n (g17\n g2\n Ntp3974\n Rp3975\n (dp3976\n g21\n g23\n sg26\n-Vbin/distl.thin_client\n+Vbin/distl.mp_spotfinder_server_read_file\n p3977\n sbg0\n (g17\n g2\n Ntp3978\n Rp3979\n (dp3980\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/spotfinder/command_line/thin_client.py\n+Vlib/python3/dist-packages/spotfinder/command_line/mp_spotfinder_server_read_file.py\n p3981\n sbsg0\n (g17\n g2\n Ntp3982\n Rp3983\n (dp3984\n g21\n g23\n sg26\n-Vbin/distl.sweep_strength\n+Vbin/distl.thin_client\n p3985\n sbg0\n (g17\n g2\n Ntp3986\n Rp3987\n (dp3988\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/spotfinder/command_line/sweep_strength.py\n+Vlib/python3/dist-packages/spotfinder/command_line/thin_client.py\n p3989\n sbsg0\n (g17\n g2\n Ntp3990\n Rp3991\n (dp3992\n g21\n g23\n sg26\n-Vbin/distl.mp_spotfinder_server_read_file\n+Vbin/distl.sweep_strength\n p3993\n sbg0\n (g17\n g2\n Ntp3994\n Rp3995\n (dp3996\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/spotfinder/command_line/mp_spotfinder_server_read_file.py\n+Vlib/python3/dist-packages/spotfinder/command_line/sweep_strength.py\n p3997\n sbsg0\n (g17\n g2\n Ntp3998\n Rp3999\n (dp4000\n g21\n g23\n sg26\n-Vbin/distl.find_active_area\n+Vbin/distl.image_viewer\n p4001\n sbg0\n (g17\n g2\n Ntp4002\n Rp4003\n (dp4004\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/spotfinder/command_line/find_active_area.py\n+Vlib/python3/dist-packages/spotfinder/command_line/image_viewer.py\n p4005\n sbsg0\n (g17\n g2\n Ntp4006\n Rp4007\n (dp4008\n g21\n g23\n sg26\n-Vbin/distl.image_viewer\n+Vbin/distl.signal_strength\n p4009\n sbg0\n (g17\n g2\n Ntp4010\n Rp4011\n (dp4012\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/spotfinder/command_line/image_viewer.py\n+Vlib/python3/dist-packages/spotfinder/command_line/signal_strength.py\n p4013\n sbsg0\n (g17\n g2\n Ntp4014\n Rp4015\n (dp4016\n g21\n g23\n sg26\n-Vbin/distl.signal_strength\n+Vbin/distl.find_active_area\n p4017\n sbg0\n (g17\n g2\n Ntp4018\n Rp4019\n (dp4020\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/spotfinder/command_line/signal_strength.py\n+Vlib/python3/dist-packages/spotfinder/command_line/find_active_area.py\n p4021\n sbsg0\n (g17\n g2\n Ntp4022\n Rp4023\n (dp4024\n@@ -10965,92 +10965,92 @@\n g2\n Ntp4030\n Rp4031\n (dp4032\n g21\n g23\n sg26\n-Vbin/rstbx.index\n+Vbin/phenix.image_viewer\n p4033\n sbg0\n (g17\n g2\n Ntp4034\n Rp4035\n (dp4036\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/rstbx/command_line/index.py\n+Vlib/python3/dist-packages/rstbx/command_line/viewer.py\n p4037\n sbsg0\n (g17\n g2\n Ntp4038\n Rp4039\n (dp4040\n g21\n g23\n sg26\n-Vbin/rstbx.simage.create\n+Vbin/rstbx.simage.solver\n p4041\n sbg0\n (g17\n g2\n Ntp4042\n Rp4043\n (dp4044\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/rstbx/command_line/simage.create.py\n+Vlib/python3/dist-packages/rstbx/command_line/simage.solver.py\n p4045\n sbsg0\n (g17\n g2\n Ntp4046\n Rp4047\n (dp4048\n g21\n g23\n sg26\n-Vbin/rstbx.simage.explore_completeness\n+Vbin/rstbx.index\n p4049\n sbg0\n (g17\n g2\n Ntp4050\n Rp4051\n (dp4052\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/rstbx/command_line/simage.explore_completeness.py\n+Vlib/python3/dist-packages/rstbx/command_line/index.py\n p4053\n sbsg0\n (g17\n g2\n Ntp4054\n Rp4055\n (dp4056\n g21\n g23\n sg26\n-Vbin/phenix.example_viewer\n+Vbin/rstbx.simage.explore_completeness\n p4057\n sbg0\n (g17\n g2\n Ntp4058\n Rp4059\n (dp4060\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/rstbx/command_line/example_viewer.py\n+Vlib/python3/dist-packages/rstbx/command_line/simage.explore_completeness.py\n p4061\n sbsg0\n (g17\n g2\n Ntp4062\n Rp4063\n (dp4064\n@@ -11075,136 +11075,136 @@\n g2\n Ntp4070\n Rp4071\n (dp4072\n g21\n g23\n sg26\n-Vbin/phenix.image_viewer\n+Vbin/rstbx.simage.create\n p4073\n sbg0\n (g17\n g2\n Ntp4074\n Rp4075\n (dp4076\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/rstbx/command_line/viewer.py\n+Vlib/python3/dist-packages/rstbx/command_line/simage.create.py\n p4077\n sbsg0\n (g17\n g2\n Ntp4078\n Rp4079\n (dp4080\n g21\n g23\n sg26\n-Vbin/rstbx.simage.solver\n+Vbin/phenix.example_viewer\n p4081\n sbg0\n (g17\n g2\n Ntp4082\n Rp4083\n (dp4084\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/rstbx/command_line/simage.solver.py\n+Vlib/python3/dist-packages/rstbx/command_line/example_viewer.py\n p4085\n sbsg0\n (g17\n g2\n Ntp4086\n Rp4087\n (dp4088\n g21\n g23\n sg26\n-Vbin/cctbx.plot_anomalous_scattering\n+Vbin/mmtbx.pdb_statistics\n p4089\n sbg0\n (g17\n g2\n Ntp4090\n Rp4091\n (dp4092\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/wxtbx/command_line/plot_anomalous_scattering.py\n+Vlib/python3/dist-packages/wxtbx/command_line/pdb_statistics.py\n p4093\n sbsg0\n (g17\n g2\n Ntp4094\n Rp4095\n (dp4096\n g21\n g23\n sg26\n-Vbin/mmtbx.bfactor_plot\n+Vbin/wxtbx.plan_sad_experiment\n p4097\n sbg0\n (g17\n g2\n Ntp4098\n Rp4099\n (dp4100\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/wxtbx/command_line/b_plot.py\n+Vlib/python3/dist-packages/wxtbx/command_line/plan_sad_experiment.py\n p4101\n sbsg0\n (g17\n g2\n Ntp4102\n Rp4103\n (dp4104\n g21\n g23\n sg26\n-Vbin/wxtbx.anomalous_differences_histogram\n+Vbin/cctbx.plot_anomalous_scattering\n p4105\n sbg0\n (g17\n g2\n Ntp4106\n Rp4107\n (dp4108\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/wxtbx/command_line/anomalous_differences_histogram.py\n+Vlib/python3/dist-packages/wxtbx/command_line/plot_anomalous_scattering.py\n p4109\n sbsg0\n (g17\n g2\n Ntp4110\n Rp4111\n (dp4112\n g21\n g23\n sg26\n-Vbin/wxtbx.inspect_r_free_flags\n+Vbin/wxtbx.anomalous_differences_histogram\n p4113\n sbg0\n (g17\n g2\n Ntp4114\n Rp4115\n (dp4116\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/wxtbx/command_line/inspect_r_free_flags.py\n+Vlib/python3/dist-packages/wxtbx/command_line/anomalous_differences_histogram.py\n p4117\n sbsg0\n (g17\n g2\n Ntp4118\n Rp4119\n (dp4120\n@@ -11229,620 +11229,620 @@\n g2\n Ntp4126\n Rp4127\n (dp4128\n g21\n g23\n sg26\n-Vbin/mmtbx.pdb_statistics\n+Vbin/cctbx.loggraph\n p4129\n sbg0\n (g17\n g2\n Ntp4130\n Rp4131\n (dp4132\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/wxtbx/command_line/pdb_statistics.py\n+Vlib/python3/dist-packages/wxtbx/command_line/loggraph.py\n p4133\n sbsg0\n (g17\n g2\n Ntp4134\n Rp4135\n (dp4136\n g21\n g23\n sg26\n-Vbin/wxtbx.xtriage\n+Vbin/phenix.pdb_editor\n p4137\n sbg0\n (g17\n g2\n Ntp4138\n Rp4139\n (dp4140\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/wxtbx/command_line/xtriage.py\n+Vlib/python3/dist-packages/wxtbx/command_line/pdb_editor.py\n p4141\n sbsg0\n (g17\n g2\n Ntp4142\n Rp4143\n (dp4144\n g21\n g23\n sg26\n-Vbin/mmtbx.xtriage_gui\n+Vbin/wxtbx.inspect_r_free_flags\n p4145\n sbg0\n (g17\n g2\n Ntp4146\n Rp4147\n (dp4148\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/wxtbx/command_line/xtriage.py\n+Vlib/python3/dist-packages/wxtbx/command_line/inspect_r_free_flags.py\n p4149\n sbsg0\n (g17\n g2\n Ntp4150\n Rp4151\n (dp4152\n g21\n g23\n sg26\n-Vbin/phenix.pdb_editor\n+Vbin/wxtbx.show_file_info\n p4153\n sbg0\n (g17\n g2\n Ntp4154\n Rp4155\n (dp4156\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/wxtbx/command_line/pdb_editor.py\n+Vlib/python3/dist-packages/wxtbx/command_line/show_file_info.py\n p4157\n sbsg0\n (g17\n g2\n Ntp4158\n Rp4159\n (dp4160\n g21\n g23\n sg26\n-Vbin/wxtbx.plan_sad_experiment\n+Vbin/wxtbx.xtriage\n p4161\n sbg0\n (g17\n g2\n Ntp4162\n Rp4163\n (dp4164\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/wxtbx/command_line/plan_sad_experiment.py\n+Vlib/python3/dist-packages/wxtbx/command_line/xtriage.py\n p4165\n sbsg0\n (g17\n g2\n Ntp4166\n Rp4167\n (dp4168\n g21\n g23\n sg26\n-Vbin/wxtbx.show_file_info\n+Vbin/mmtbx.xtriage_gui\n p4169\n sbg0\n (g17\n g2\n Ntp4170\n Rp4171\n (dp4172\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/wxtbx/command_line/show_file_info.py\n+Vlib/python3/dist-packages/wxtbx/command_line/xtriage.py\n p4173\n sbsg0\n (g17\n g2\n Ntp4174\n Rp4175\n (dp4176\n g21\n g23\n sg26\n-Vbin/cctbx.loggraph\n+Vbin/mmtbx.bfactor_plot\n p4177\n sbg0\n (g17\n g2\n Ntp4178\n Rp4179\n (dp4180\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/wxtbx/command_line/loggraph.py\n+Vlib/python3/dist-packages/wxtbx/command_line/b_plot.py\n p4181\n sbsg0\n (g17\n g2\n Ntp4182\n Rp4183\n (dp4184\n g21\n g23\n sg26\n-Vbin/dxtbx.image_average\n+Vbin/dxtbx.print_header\n p4185\n sbg0\n (g17\n g2\n Ntp4186\n Rp4187\n (dp4188\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/dxtbx/src/dxtbx/command_line/image_average.py\n+Vlib/python3/dist-packages/dxtbx/src/dxtbx/command_line/print_header.py\n p4189\n sbsg0\n (g17\n g2\n Ntp4190\n Rp4191\n (dp4192\n g21\n g23\n sg26\n-Vbin/cxi.image_average\n+Vbin/dxtbx.saturation\n p4193\n sbg0\n (g17\n g2\n Ntp4194\n Rp4195\n (dp4196\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/dxtbx/src/dxtbx/command_line/image_average.py\n+Vlib/python3/dist-packages/dxtbx/src/dxtbx/command_line/saturation.py\n p4197\n sbsg0\n (g17\n g2\n Ntp4198\n Rp4199\n (dp4200\n g21\n g23\n sg26\n-Vbin/dxtbx.radial_average\n+Vbin/dxtbx.overload\n p4201\n sbg0\n (g17\n g2\n Ntp4202\n Rp4203\n (dp4204\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/dxtbx/src/dxtbx/command_line/radial_average.py\n+Vlib/python3/dist-packages/dxtbx/src/dxtbx/command_line/overload.py\n p4205\n sbsg0\n (g17\n g2\n Ntp4206\n Rp4207\n (dp4208\n g21\n g23\n sg26\n-Vbin/dxtbx.install_format\n+Vbin/dxtbx.image_average\n p4209\n sbg0\n (g17\n g2\n Ntp4210\n Rp4211\n (dp4212\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/dxtbx/src/dxtbx/command_line/install_format.py\n+Vlib/python3/dist-packages/dxtbx/src/dxtbx/command_line/image_average.py\n p4213\n sbsg0\n (g17\n g2\n Ntp4214\n Rp4215\n (dp4216\n g21\n g23\n sg26\n-Vbin/dxtbx.depends_on\n+Vbin/cxi.image_average\n p4217\n sbg0\n (g17\n g2\n Ntp4218\n Rp4219\n (dp4220\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/dxtbx/src/dxtbx/command_line/depends_on.py\n+Vlib/python3/dist-packages/dxtbx/src/dxtbx/command_line/image_average.py\n p4221\n sbsg0\n (g17\n g2\n Ntp4222\n Rp4223\n (dp4224\n g21\n g23\n sg26\n-Vbin/dev.dxtbx.debug_memory\n+Vbin/dxtbx.show_matching_formats\n p4225\n sbg0\n (g17\n g2\n Ntp4226\n Rp4227\n (dp4228\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/dxtbx/src/dxtbx/command_line/debug_memory.py\n+Vlib/python3/dist-packages/dxtbx/src/dxtbx/command_line/show_matching_formats.py\n p4229\n sbsg0\n (g17\n g2\n Ntp4230\n Rp4231\n (dp4232\n g21\n g23\n sg26\n-Vbin/dxtbx.print_header\n+Vbin/dev.dxtbx.read_sequence\n p4233\n sbg0\n (g17\n g2\n Ntp4234\n Rp4235\n (dp4236\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/dxtbx/src/dxtbx/command_line/print_header.py\n+Vlib/python3/dist-packages/dxtbx/src/dxtbx/command_line/read_sequence.py\n p4237\n sbsg0\n (g17\n g2\n Ntp4238\n Rp4239\n (dp4240\n g21\n g23\n sg26\n-Vbin/dev.dxtbx.read_sequence\n+Vbin/dxtbx.print_matching_images\n p4241\n sbg0\n (g17\n g2\n Ntp4242\n Rp4243\n (dp4244\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/dxtbx/src/dxtbx/command_line/read_sequence.py\n+Vlib/python3/dist-packages/dxtbx/src/dxtbx/command_line/print_matching_images.py\n p4245\n sbsg0\n (g17\n g2\n Ntp4246\n Rp4247\n (dp4248\n g21\n g23\n sg26\n-Vbin/dxtbx.overload\n+Vbin/dxtbx.radial_average\n p4249\n sbg0\n (g17\n g2\n Ntp4250\n Rp4251\n (dp4252\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/dxtbx/src/dxtbx/command_line/overload.py\n+Vlib/python3/dist-packages/dxtbx/src/dxtbx/command_line/radial_average.py\n p4253\n sbsg0\n (g17\n g2\n Ntp4254\n Rp4255\n (dp4256\n g21\n g23\n sg26\n-Vbin/dxtbx.plot_detector_models\n+Vbin/dxtbx.dlsnxs2cbf\n p4257\n sbg0\n (g17\n g2\n Ntp4258\n Rp4259\n (dp4260\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/dxtbx/src/dxtbx/command_line/plot_detector_models.py\n+Vlib/python3/dist-packages/dxtbx/src/dxtbx/command_line/dlsnxs2cbf.py\n p4261\n sbsg0\n (g17\n g2\n Ntp4262\n Rp4263\n (dp4264\n g21\n g23\n sg26\n-Vbin/dxtbx.show_mask_info\n+Vbin/dxtbx.depends_on\n p4265\n sbg0\n (g17\n g2\n Ntp4266\n Rp4267\n (dp4268\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/dxtbx/src/dxtbx/command_line/show_mask_info.py\n+Vlib/python3/dist-packages/dxtbx/src/dxtbx/command_line/depends_on.py\n p4269\n sbsg0\n (g17\n g2\n Ntp4270\n Rp4271\n (dp4272\n g21\n g23\n sg26\n-Vbin/dxtbx.print_matching_images\n+Vbin/dxtbx.show_registry\n p4273\n sbg0\n (g17\n g2\n Ntp4274\n Rp4275\n (dp4276\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/dxtbx/src/dxtbx/command_line/print_matching_images.py\n+Vlib/python3/dist-packages/dxtbx/src/dxtbx/command_line/show_registry.py\n p4277\n sbsg0\n (g17\n g2\n Ntp4278\n Rp4279\n (dp4280\n g21\n g23\n sg26\n-Vbin/dxtbx.display_parallax_correction\n+Vbin/dxtbx.any2nexus\n p4281\n sbg0\n (g17\n g2\n Ntp4282\n Rp4283\n (dp4284\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/dxtbx/src/dxtbx/command_line/display_parallax_correction.py\n+Vlib/python3/dist-packages/dxtbx/src/dxtbx/command_line/any2nexus.py\n p4285\n sbsg0\n (g17\n g2\n Ntp4286\n Rp4287\n (dp4288\n g21\n g23\n sg26\n-Vbin/dxtbx.any2nexus\n+Vbin/dxtbx.detector_superpose\n p4289\n sbg0\n (g17\n g2\n Ntp4290\n Rp4291\n (dp4292\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/dxtbx/src/dxtbx/command_line/any2nexus.py\n+Vlib/python3/dist-packages/dxtbx/src/dxtbx/command_line/detector_superpose.py\n p4293\n sbsg0\n (g17\n g2\n Ntp4294\n Rp4295\n (dp4296\n g21\n g23\n sg26\n-Vbin/dxtbx.saturation\n+Vbin/dxtbx.plot_detector_models\n p4297\n sbg0\n (g17\n g2\n Ntp4298\n Rp4299\n (dp4300\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/dxtbx/src/dxtbx/command_line/saturation.py\n+Vlib/python3/dist-packages/dxtbx/src/dxtbx/command_line/plot_detector_models.py\n p4301\n sbsg0\n (g17\n g2\n Ntp4302\n Rp4303\n (dp4304\n g21\n g23\n sg26\n-Vbin/dxtbx.detector_superpose\n+Vbin/dxtbx.show_mask_info\n p4305\n sbg0\n (g17\n g2\n Ntp4306\n Rp4307\n (dp4308\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/dxtbx/src/dxtbx/command_line/detector_superpose.py\n+Vlib/python3/dist-packages/dxtbx/src/dxtbx/command_line/show_mask_info.py\n p4309\n sbsg0\n (g17\n g2\n Ntp4310\n Rp4311\n (dp4312\n g21\n g23\n sg26\n-Vbin/dxtbx.show_registry\n+Vbin/dxtbx.image2pickle\n p4313\n sbg0\n (g17\n g2\n Ntp4314\n Rp4315\n (dp4316\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/dxtbx/src/dxtbx/command_line/show_registry.py\n+Vlib/python3/dist-packages/dxtbx/src/dxtbx/command_line/image2pickle.py\n p4317\n sbsg0\n (g17\n g2\n Ntp4318\n Rp4319\n (dp4320\n g21\n g23\n sg26\n-Vbin/dxtbx.dlsnxs2cbf\n+Vbin/cxi.image2pickle\n p4321\n sbg0\n (g17\n g2\n Ntp4322\n Rp4323\n (dp4324\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/dxtbx/src/dxtbx/command_line/dlsnxs2cbf.py\n+Vlib/python3/dist-packages/dxtbx/src/dxtbx/command_line/image2pickle.py\n p4325\n sbsg0\n (g17\n g2\n Ntp4326\n Rp4327\n (dp4328\n g21\n g23\n sg26\n-Vbin/dxtbx.show_matching_formats\n+Vbin/dxtbx.display_parallax_correction\n p4329\n sbg0\n (g17\n g2\n Ntp4330\n Rp4331\n (dp4332\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/dxtbx/src/dxtbx/command_line/show_matching_formats.py\n+Vlib/python3/dist-packages/dxtbx/src/dxtbx/command_line/display_parallax_correction.py\n p4333\n sbsg0\n (g17\n g2\n Ntp4334\n Rp4335\n (dp4336\n g21\n g23\n sg26\n-Vbin/dxtbx.image2pickle\n+Vbin/dxtbx.install_format\n p4337\n sbg0\n (g17\n g2\n Ntp4338\n Rp4339\n (dp4340\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/dxtbx/src/dxtbx/command_line/image2pickle.py\n+Vlib/python3/dist-packages/dxtbx/src/dxtbx/command_line/install_format.py\n p4341\n sbsg0\n (g17\n g2\n Ntp4342\n Rp4343\n (dp4344\n g21\n g23\n sg26\n-Vbin/cxi.image2pickle\n+Vbin/dev.dxtbx.debug_memory\n p4345\n sbg0\n (g17\n g2\n Ntp4346\n Rp4347\n (dp4348\n g21\n g23\n sg26\n-Vlib/python3/dist-packages/dxtbx/src/dxtbx/command_line/image2pickle.py\n+Vlib/python3/dist-packages/dxtbx/src/dxtbx/command_line/debug_memory.py\n p4349\n sbsg0\n (g17\n g2\n Ntp4350\n Rp4351\n (dp4352\n"}]}]}]}]}