{"diffoscope-json-version": 1, "source1": "/srv/reproducible-results/rbuild-debian/r-b-build.NY7cVq88/b1/brian_2.4.2-6_armhf.changes", "source2": "/srv/reproducible-results/rbuild-debian/r-b-build.NY7cVq88/b2/brian_2.4.2-6_armhf.changes", "unified_diff": null, "details": [{"source1": "Files", "source2": "Files", "unified_diff": "@@ -1,5 +1,5 @@\n \n- e3537fba4cdc79ed0a7b9ef91bc5948b 1470540 doc optional python-brian-doc_2.4.2-6_all.deb\n+ 52eb905d58de756138fed66e48f4abb4 1470536 doc optional python-brian-doc_2.4.2-6_all.deb\n 32e5c9ec4855f0d944501360a7eca11a 438244 debug optional python3-brian-lib-dbgsym_2.4.2-6_armhf.deb\n 15d813454d24a2f3c77aa819f276ac79 76716 python optional python3-brian-lib_2.4.2-6_armhf.deb\n 42528303168e164beb2187ad395bcb25 467976 python optional python3-brian_2.4.2-6_all.deb\n"}, {"source1": "python-brian-doc_2.4.2-6_all.deb", "source2": "python-brian-doc_2.4.2-6_all.deb", "unified_diff": null, "details": [{"source1": "file list", "source2": "file list", "unified_diff": "@@ -1,3 +1,3 @@\n -rw-r--r-- 0 0 0 4 2021-02-20 20:42:14.000000 debian-binary\n--rw-r--r-- 0 0 0 33968 2021-02-20 20:42:14.000000 control.tar.xz\n--rw-r--r-- 0 0 0 1436380 2021-02-20 20:42:14.000000 data.tar.xz\n+-rw-r--r-- 0 0 0 33936 2021-02-20 20:42:14.000000 control.tar.xz\n+-rw-r--r-- 0 0 0 1436408 2021-02-20 20:42:14.000000 data.tar.xz\n"}, {"source1": "control.tar.xz", "source2": "control.tar.xz", "unified_diff": null, "details": [{"source1": "control.tar", "source2": "control.tar", "unified_diff": null, "details": [{"source1": "./md5sums", "source2": "./md5sums", "unified_diff": null, "details": [{"source1": "./md5sums", "source2": "./md5sums", "comments": ["Files differ"], "unified_diff": null}]}]}]}, {"source1": "data.tar.xz", "source2": "data.tar.xz", "unified_diff": null, "details": [{"source1": "data.tar", "source2": "data.tar", "unified_diff": null, "details": [{"source1": "file list", "source2": "file list", "unified_diff": "@@ -187,15 +187,15 @@\n -rw-r--r-- 0 root (0) root (0) 2191 2021-02-20 20:42:14.000000 ./usr/share/doc/python-brian-doc/docs/_sources/examples/compartmental.spike_initiation.rst.txt\n -rw-r--r-- 0 root (0) root (0) 1679 2021-02-20 20:42:14.000000 ./usr/share/doc/python-brian-doc/docs/_sources/examples/frompapers.Brette_2004.rst.txt\n -rw-r--r-- 0 root (0) root (0) 2812 2021-02-20 20:42:14.000000 ./usr/share/doc/python-brian-doc/docs/_sources/examples/frompapers.Brette_2012.Fig1.rst.txt\n -rw-r--r-- 0 root (0) root (0) 2426 2021-02-20 20:42:14.000000 ./usr/share/doc/python-brian-doc/docs/_sources/examples/frompapers.Brette_2012.Fig3AB.rst.txt\n -rw-r--r-- 0 root (0) root (0) 3467 2021-02-20 20:42:14.000000 ./usr/share/doc/python-brian-doc/docs/_sources/examples/frompapers.Brette_2012.Fig3CF.rst.txt\n -rw-r--r-- 0 root (0) root (0) 2652 2021-02-20 20:42:14.000000 ./usr/share/doc/python-brian-doc/docs/_sources/examples/frompapers.Brette_2012.Fig4.rst.txt\n -rw-r--r-- 0 root (0) root (0) 2617 2021-02-20 20:42:14.000000 ./usr/share/doc/python-brian-doc/docs/_sources/examples/frompapers.Brette_2012.Fig5A.rst.txt\n--rw-r--r-- 0 root (0) root (0) 392 2021-02-20 20:42:14.000000 ./usr/share/doc/python-brian-doc/docs/_sources/examples/frompapers.Brette_2012.README.txt.rst.txt\n+-rw-r--r-- 0 root (0) root (0) 393 2021-02-20 20:42:14.000000 ./usr/share/doc/python-brian-doc/docs/_sources/examples/frompapers.Brette_2012.README.txt.rst.txt\n -rw-r--r-- 0 root (0) root (0) 1011 2021-02-20 20:42:14.000000 ./usr/share/doc/python-brian-doc/docs/_sources/examples/frompapers.Brette_2012.params.rst.txt\n -rw-r--r-- 0 root (0) root (0) 2180 2021-02-20 20:42:14.000000 ./usr/share/doc/python-brian-doc/docs/_sources/examples/frompapers.Brette_Gerstner_2005.rst.txt\n -rw-r--r-- 0 root (0) root (0) 2404 2021-02-20 20:42:14.000000 ./usr/share/doc/python-brian-doc/docs/_sources/examples/frompapers.Brette_Guigon_2003.rst.txt\n -rw-r--r-- 0 root (0) root (0) 1995 2021-02-20 20:42:14.000000 ./usr/share/doc/python-brian-doc/docs/_sources/examples/frompapers.Brunel_Hakim_1999.rst.txt\n -rw-r--r-- 0 root (0) root (0) 7718 2021-02-20 20:42:14.000000 ./usr/share/doc/python-brian-doc/docs/_sources/examples/frompapers.Brunel_Wang_2001.rst.txt\n -rw-r--r-- 0 root (0) root (0) 8896 2021-02-20 20:42:14.000000 ./usr/share/doc/python-brian-doc/docs/_sources/examples/frompapers.Clopath_et_al_2010_homeostasis.rst.txt\n -rw-r--r-- 0 root (0) root (0) 8062 2021-02-20 20:42:14.000000 ./usr/share/doc/python-brian-doc/docs/_sources/examples/frompapers.Clopath_et_al_2010_no_homeostasis.rst.txt\n@@ -204,23 +204,23 @@\n -rw-r--r-- 0 root (0) root (0) 2538 2021-02-20 20:42:14.000000 ./usr/share/doc/python-brian-doc/docs/_sources/examples/frompapers.Hindmarsh_Rose_1984.rst.txt\n -rw-r--r-- 0 root (0) root (0) 5575 2021-02-20 20:42:14.000000 ./usr/share/doc/python-brian-doc/docs/_sources/examples/frompapers.Izhikevich_2007.rst.txt\n -rw-r--r-- 0 root (0) root (0) 7822 2021-02-20 20:42:14.000000 ./usr/share/doc/python-brian-doc/docs/_sources/examples/frompapers.Kremer_et_al_2011_barrel_cortex.rst.txt\n -rw-r--r-- 0 root (0) root (0) 3362 2021-02-20 20:42:14.000000 ./usr/share/doc/python-brian-doc/docs/_sources/examples/frompapers.Morris_Lecar_1981.rst.txt\n -rw-r--r-- 0 root (0) root (0) 3867 2021-02-20 20:42:14.000000 ./usr/share/doc/python-brian-doc/docs/_sources/examples/frompapers.Platkiewicz_Brette_2011.rst.txt\n -rw-r--r-- 0 root (0) root (0) 3321 2021-02-20 20:42:14.000000 ./usr/share/doc/python-brian-doc/docs/_sources/examples/frompapers.Rossant_et_al_2011bis.rst.txt\n -rw-r--r-- 0 root (0) root (0) 5626 2021-02-20 20:42:14.000000 ./usr/share/doc/python-brian-doc/docs/_sources/examples/frompapers.Rothman_Manis_2003.rst.txt\n--rw-r--r-- 0 root (0) root (0) 828 2021-02-20 20:42:14.000000 ./usr/share/doc/python-brian-doc/docs/_sources/examples/frompapers.Stimberg_et_al_2018.README.md.rst.txt\n+-rw-r--r-- 0 root (0) root (0) 829 2021-02-20 20:42:14.000000 ./usr/share/doc/python-brian-doc/docs/_sources/examples/frompapers.Stimberg_et_al_2018.README.md.rst.txt\n -rw-r--r-- 0 root (0) root (0) 9937 2021-02-20 20:42:14.000000 ./usr/share/doc/python-brian-doc/docs/_sources/examples/frompapers.Stimberg_et_al_2018.example_1_COBA.rst.txt\n -rw-r--r-- 0 root (0) root (0) 9865 2021-02-20 20:42:14.000000 ./usr/share/doc/python-brian-doc/docs/_sources/examples/frompapers.Stimberg_et_al_2018.example_2_gchi_astrocyte.rst.txt\n -rw-r--r-- 0 root (0) root (0) 13592 2021-02-20 20:42:14.000000 ./usr/share/doc/python-brian-doc/docs/_sources/examples/frompapers.Stimberg_et_al_2018.example_3_io_synapse.rst.txt\n -rw-r--r-- 0 root (0) root (0) 13198 2021-02-20 20:42:14.000000 ./usr/share/doc/python-brian-doc/docs/_sources/examples/frompapers.Stimberg_et_al_2018.example_4_rsmean.rst.txt\n -rw-r--r-- 0 root (0) root (0) 13798 2021-02-20 20:42:14.000000 ./usr/share/doc/python-brian-doc/docs/_sources/examples/frompapers.Stimberg_et_al_2018.example_4_synrel.rst.txt\n -rw-r--r-- 0 root (0) root (0) 7887 2021-02-20 20:42:14.000000 ./usr/share/doc/python-brian-doc/docs/_sources/examples/frompapers.Stimberg_et_al_2018.example_5_astro_ring.rst.txt\n -rw-r--r-- 0 root (0) root (0) 16690 2021-02-20 20:42:14.000000 ./usr/share/doc/python-brian-doc/docs/_sources/examples/frompapers.Stimberg_et_al_2018.example_6_COBA_with_astro.rst.txt\n--rw-r--r-- 0 root (0) root (0) 321 2021-02-20 20:42:14.000000 ./usr/share/doc/python-brian-doc/docs/_sources/examples/frompapers.Stimberg_et_al_2018.figures.mplstyle.rst.txt\n+-rw-r--r-- 0 root (0) root (0) 322 2021-02-20 20:42:14.000000 ./usr/share/doc/python-brian-doc/docs/_sources/examples/frompapers.Stimberg_et_al_2018.figures.mplstyle.rst.txt\n -rw-r--r-- 0 root (0) root (0) 2519 2021-02-20 20:42:14.000000 ./usr/share/doc/python-brian-doc/docs/_sources/examples/frompapers.Stimberg_et_al_2018.plot_utils.rst.txt\n -rw-r--r-- 0 root (0) root (0) 3144 2021-02-20 20:42:14.000000 ./usr/share/doc/python-brian-doc/docs/_sources/examples/frompapers.Sturzl_et_al_2000.rst.txt\n -rw-r--r-- 0 root (0) root (0) 2233 2021-02-20 20:42:14.000000 ./usr/share/doc/python-brian-doc/docs/_sources/examples/frompapers.Touboul_Brette_2008.rst.txt\n -rw-r--r-- 0 root (0) root (0) 4685 2021-02-20 20:42:14.000000 ./usr/share/doc/python-brian-doc/docs/_sources/examples/frompapers.Vogels_et_al_2011.rst.txt\n -rw-r--r-- 0 root (0) root (0) 1967 2021-02-20 20:42:14.000000 ./usr/share/doc/python-brian-doc/docs/_sources/examples/frompapers.Wang_Buszaki_1996.rst.txt\n -rw-r--r-- 0 root (0) root (0) 4357 2021-02-20 20:42:14.000000 ./usr/share/doc/python-brian-doc/docs/_sources/examples/index.rst.txt\n -rw-r--r-- 0 root (0) root (0) 1294 2021-02-20 20:42:14.000000 ./usr/share/doc/python-brian-doc/docs/_sources/examples/non_reliability.rst.txt\n"}, {"source1": "./usr/share/doc/python-brian-doc/docs/_sources/examples/frompapers.Brette_2012.README.txt.rst.txt", "source2": "./usr/share/doc/python-brian-doc/docs/_sources/examples/frompapers.Brette_2012.README.txt.rst.txt", "unified_diff": "@@ -1,9 +1,9 @@\n README.txt\n-=====================\n+======================\n \n .. code:: none\n \n \tThese are Brian scripts corresponding to the following paper:\n \t\n \tBrette R (2013). Sharpness of spike initiation in neurons explained by compartmentalization.\n \tPLoS Comp Biol, doi: 10.1371/journal.pcbi.1003338.\n"}, {"source1": "./usr/share/doc/python-brian-doc/docs/_sources/examples/frompapers.Stimberg_et_al_2018.README.md.rst.txt", "source2": "./usr/share/doc/python-brian-doc/docs/_sources/examples/frompapers.Stimberg_et_al_2018.README.md.rst.txt", "unified_diff": "@@ -1,9 +1,9 @@\n README.md\n-=====================\n+======================\n \n .. code:: none\n \n \tThese Brian scripts reproduce the figures from the following preprint:\n \t\n \tModeling neuron-glia interactions with the Brian 2 simulator\n \tMarcel Stimberg, Dan F. M. Goodman, Romain Brette, Maurizio De Pitt\u00e0\n"}, {"source1": "./usr/share/doc/python-brian-doc/docs/_sources/examples/frompapers.Stimberg_et_al_2018.figures.mplstyle.rst.txt", "source2": "./usr/share/doc/python-brian-doc/docs/_sources/examples/frompapers.Stimberg_et_al_2018.figures.mplstyle.rst.txt", "unified_diff": "@@ -1,9 +1,9 @@\n figures.mplstyle\n-=====================\n+======================\n \n .. code:: none\n \n \taxes.linewidth : 1\n \txtick.labelsize : 8\n \tytick.labelsize : 8\n \taxes.labelsize : 8\n"}, {"source1": "./usr/share/doc/python-brian-doc/docs/_sources/reference/brian2.core.clocks.Clock.rst.txt", "source2": "./usr/share/doc/python-brian-doc/docs/_sources/reference/brian2.core.clocks.Clock.rst.txt", "comments": ["Ordering differences only"], "unified_diff": "@@ -6,10 +6,10 @@\n (*Shortest import*: ``from brian2 import Clock)``\n \n .. autoclass:: Clock\n \n Tutorials and examples using this\n ---------------------------------\n \n-* Example :doc:`CUBA `\n * Example :doc:`COBAHH `\n+* Example :doc:`CUBA `\n \n"}, {"source1": "./usr/share/doc/python-brian-doc/docs/_sources/reference/brian2.core.functions.exprel.rst.txt", "source2": "./usr/share/doc/python-brian-doc/docs/_sources/reference/brian2.core.functions.exprel.rst.txt", "comments": ["Ordering differences only"], "unified_diff": "@@ -6,16 +6,16 @@\n (*Shortest import*: ``from brian2.core.functions import exprel)``\n \n .. autoclass:: exprel\n \n Tutorials and examples using this\n ---------------------------------\n \n-* Example :doc:`IF_curve_Hodgkin_Huxley `\n * Example :doc:`COBAHH `\n-* Example :doc:`advanced/float_32_64_benchmark `\n-* Example :doc:`advanced/exprel_function `\n+* Example :doc:`IF_curve_Hodgkin_Huxley `\n * Example :doc:`frompapers/Wang_Buszaki_1996 `\n * Example :doc:`compartmental/lfp `\n-* Example :doc:`compartmental/hodgkin_huxley_1952 `\n * Example :doc:`compartmental/hh_with_spikes `\n+* Example :doc:`compartmental/hodgkin_huxley_1952 `\n+* Example :doc:`advanced/exprel_function `\n+* Example :doc:`advanced/float_32_64_benchmark `\n \n"}, {"source1": "./usr/share/doc/python-brian-doc/docs/_sources/reference/brian2.core.network.Network.rst.txt", "source2": "./usr/share/doc/python-brian-doc/docs/_sources/reference/brian2.core.network.Network.rst.txt", "comments": ["Ordering differences only"], "unified_diff": "@@ -9,11 +9,11 @@\n \n Tutorials and examples using this\n ---------------------------------\n \n * Tutorial :doc:`3-intro-to-brian-simulations `\n * Example :doc:`IF_curve_LIF `\n * Example :doc:`IF_curve_Hodgkin_Huxley `\n+* Example :doc:`frompapers/Brunel_Wang_2001 `\n * Example :doc:`advanced/stochastic_odes `\n * Example :doc:`advanced/compare_GSL_to_conventional `\n-* Example :doc:`frompapers/Brunel_Wang_2001 `\n \n"}, {"source1": "./usr/share/doc/python-brian-doc/docs/_sources/reference/brian2.devices.device.Dummy.rst.txt", "source2": "./usr/share/doc/python-brian-doc/docs/_sources/reference/brian2.devices.device.Dummy.rst.txt", "comments": ["Ordering differences only"], "unified_diff": "@@ -6,10 +6,10 @@\n (*Shortest import*: ``from brian2.devices.device import Dummy)``\n \n .. autoclass:: Dummy\n \n Tutorials and examples using this\n ---------------------------------\n \n-* Example :doc:`advanced/exprel_function `\n * Example :doc:`frompapers/Stimberg_et_al_2018/example_2_gchi_astrocyte `\n+* Example :doc:`advanced/exprel_function `\n \n"}, {"source1": "./usr/share/doc/python-brian-doc/docs/_sources/reference/brian2.equations.equations.Equations.rst.txt", "source2": "./usr/share/doc/python-brian-doc/docs/_sources/reference/brian2.equations.equations.Equations.rst.txt", "comments": ["Ordering differences only"], "unified_diff": "@@ -6,17 +6,17 @@\n (*Shortest import*: ``from brian2 import Equations)``\n \n .. autoclass:: Equations\n \n Tutorials and examples using this\n ---------------------------------\n \n-* Example :doc:`IF_curve_Hodgkin_Huxley `\n * Example :doc:`COBAHH `\n-* Example :doc:`advanced/float_32_64_benchmark `\n-* Example :doc:`frompapers/Rossant_et_al_2011bis `\n+* Example :doc:`IF_curve_Hodgkin_Huxley `\n * Example :doc:`frompapers/Destexhe_et_al_1998 `\n+* Example :doc:`frompapers/Rossant_et_al_2011bis `\n * Example :doc:`frompapers/Diesmann_et_al_1999 `\n+* Example :doc:`frompapers/Clopath_et_al_2010_homeostasis `\n * Example :doc:`frompapers/Hindmarsh_Rose_1984 `\n * Example :doc:`frompapers/Clopath_et_al_2010_no_homeostasis `\n-* Example :doc:`frompapers/Clopath_et_al_2010_homeostasis `\n+* Example :doc:`advanced/float_32_64_benchmark `\n \n"}, {"source1": "./usr/share/doc/python-brian-doc/docs/_sources/reference/brian2.groups.neurongroup.NeuronGroup.rst.txt", "source2": "./usr/share/doc/python-brian-doc/docs/_sources/reference/brian2.groups.neurongroup.NeuronGroup.rst.txt", "comments": ["Ordering differences only"], "unified_diff": "@@ -6,65 +6,65 @@\n (*Shortest import*: ``from brian2 import NeuronGroup)``\n \n .. autoclass:: NeuronGroup\n \n Tutorials and examples using this\n ---------------------------------\n \n+* Tutorial :doc:`3-intro-to-brian-simulations `\n * Tutorial :doc:`1-intro-to-brian-neurons `\n * Tutorial :doc:`2-intro-to-brian-synapses `\n-* Tutorial :doc:`3-intro-to-brian-simulations `\n-* Example :doc:`IF_curve_LIF `\n-* Example :doc:`adaptive_threshold `\n+* Example :doc:`reliability `\n+* Example :doc:`COBAHH `\n+* Example :doc:`non_reliability `\n * Example :doc:`phase_locking `\n * Example :doc:`CUBA `\n+* Example :doc:`adaptive_threshold `\n+* Example :doc:`IF_curve_LIF `\n * Example :doc:`IF_curve_Hodgkin_Huxley `\n-* Example :doc:`non_reliability `\n-* Example :doc:`reliability `\n-* Example :doc:`COBAHH `\n-* Example :doc:`advanced/custom_events `\n-* Example :doc:`advanced/float_32_64_benchmark `\n-* Example :doc:`advanced/stochastic_odes `\n-* Example :doc:`advanced/opencv_movie `\n-* Example :doc:`advanced/exprel_function `\n-* Example :doc:`advanced/compare_GSL_to_conventional `\n+* Example :doc:`standalone/STDP_standalone `\n+* Example :doc:`standalone/cuba_openmp `\n+* Example :doc:`synapses/synapses `\n+* Example :doc:`synapses/jeffress `\n+* Example :doc:`synapses/gapjunctions `\n+* Example :doc:`synapses/spatial_connections `\n+* Example :doc:`synapses/licklider `\n+* Example :doc:`synapses/efficient_gaussian_connectivity `\n+* Example :doc:`synapses/STDP `\n+* Example :doc:`synapses/state_variables `\n+* Example :doc:`synapses/nonlinear `\n+* Example :doc:`frompapers/Rothman_Manis_2003 `\n * Example :doc:`frompapers/Brette_2004 `\n-* Example :doc:`frompapers/Wang_Buszaki_1996 `\n+* Example :doc:`frompapers/Vogels_et_al_2011 `\n+* Example :doc:`frompapers/Brunel_Hakim_1999 `\n * Example :doc:`frompapers/Rossant_et_al_2011bis `\n-* Example :doc:`frompapers/Kremer_et_al_2011_barrel_cortex `\n-* Example :doc:`frompapers/Brunel_Wang_2001 `\n-* Example :doc:`frompapers/Diesmann_et_al_1999 `\n-* Example :doc:`frompapers/Hindmarsh_Rose_1984 `\n-* Example :doc:`frompapers/Brette_Gerstner_2005 `\n-* Example :doc:`frompapers/Platkiewicz_Brette_2011 `\n-* Example :doc:`frompapers/Rothman_Manis_2003 `\n-* Example :doc:`frompapers/Clopath_et_al_2010_no_homeostasis `\n * Example :doc:`frompapers/Morris_Lecar_1981 `\n-* Example :doc:`frompapers/Brette_Guigon_2003 `\n-* Example :doc:`frompapers/Brunel_Hakim_1999 `\n-* Example :doc:`frompapers/Izhikevich_2007 `\n+* Example :doc:`frompapers/Diesmann_et_al_1999 `\n * Example :doc:`frompapers/Sturzl_et_al_2000 `\n+* Example :doc:`frompapers/Brette_Gerstner_2005 `\n+* Example :doc:`frompapers/Wang_Buszaki_1996 `\n+* Example :doc:`frompapers/Brunel_Wang_2001 `\n * Example :doc:`frompapers/Clopath_et_al_2010_homeostasis `\n * Example :doc:`frompapers/Touboul_Brette_2008 `\n-* Example :doc:`frompapers/Vogels_et_al_2011 `\n-* Example :doc:`frompapers/Stimberg_et_al_2018/example_2_gchi_astrocyte `\n-* Example :doc:`frompapers/Stimberg_et_al_2018/example_1_COBA `\n-* Example :doc:`frompapers/Stimberg_et_al_2018/example_5_astro_ring `\n-* Example :doc:`frompapers/Stimberg_et_al_2018/example_6_COBA_with_astro `\n-* Example :doc:`frompapers/Stimberg_et_al_2018/example_4_synrel `\n+* Example :doc:`frompapers/Kremer_et_al_2011_barrel_cortex `\n+* Example :doc:`frompapers/Brette_Guigon_2003 `\n+* Example :doc:`frompapers/Hindmarsh_Rose_1984 `\n+* Example :doc:`frompapers/Izhikevich_2007 `\n+* Example :doc:`frompapers/Platkiewicz_Brette_2011 `\n+* Example :doc:`frompapers/Clopath_et_al_2010_no_homeostasis `\n * Example :doc:`frompapers/Stimberg_et_al_2018/example_4_rsmean `\n * Example :doc:`frompapers/Stimberg_et_al_2018/example_3_io_synapse `\n-* Example :doc:`synapses/nonlinear `\n-* Example :doc:`synapses/gapjunctions `\n-* Example :doc:`synapses/efficient_gaussian_connectivity `\n-* Example :doc:`synapses/synapses `\n-* Example :doc:`synapses/STDP `\n-* Example :doc:`synapses/licklider `\n-* Example :doc:`synapses/jeffress `\n-* Example :doc:`synapses/state_variables `\n-* Example :doc:`synapses/spatial_connections `\n-* Example :doc:`standalone/cuba_openmp `\n-* Example :doc:`standalone/STDP_standalone `\n+* Example :doc:`frompapers/Stimberg_et_al_2018/example_4_synrel `\n+* Example :doc:`frompapers/Stimberg_et_al_2018/example_6_COBA_with_astro `\n+* Example :doc:`frompapers/Stimberg_et_al_2018/example_1_COBA `\n+* Example :doc:`frompapers/Stimberg_et_al_2018/example_5_astro_ring `\n+* Example :doc:`frompapers/Stimberg_et_al_2018/example_2_gchi_astrocyte `\n * Example :doc:`compartmental/lfp `\n * Example :doc:`compartmental/bipolar_with_inputs2 `\n * Example :doc:`compartmental/bipolar_with_inputs `\n+* Example :doc:`advanced/exprel_function `\n+* Example :doc:`advanced/opencv_movie `\n+* Example :doc:`advanced/stochastic_odes `\n+* Example :doc:`advanced/compare_GSL_to_conventional `\n+* Example :doc:`advanced/float_32_64_benchmark `\n+* Example :doc:`advanced/custom_events `\n \n"}, {"source1": "./usr/share/doc/python-brian-doc/docs/_sources/reference/brian2.input.poissongroup.PoissonGroup.rst.txt", "source2": "./usr/share/doc/python-brian-doc/docs/_sources/reference/brian2.input.poissongroup.PoissonGroup.rst.txt", "comments": ["Ordering differences only"], "unified_diff": "@@ -8,13 +8,13 @@\n .. autoclass:: PoissonGroup\n \n Tutorials and examples using this\n ---------------------------------\n \n * Tutorial :doc:`3-intro-to-brian-simulations `\n * Example :doc:`adaptive_threshold `\n-* Example :doc:`advanced/custom_events `\n-* Example :doc:`frompapers/Stimberg_et_al_2018/example_4_synrel `\n-* Example :doc:`frompapers/Stimberg_et_al_2018/example_4_rsmean `\n-* Example :doc:`synapses/STDP `\n * Example :doc:`standalone/STDP_standalone `\n+* Example :doc:`synapses/STDP `\n+* Example :doc:`frompapers/Stimberg_et_al_2018/example_4_rsmean `\n+* Example :doc:`frompapers/Stimberg_et_al_2018/example_4_synrel `\n+* Example :doc:`advanced/custom_events `\n \n"}, {"source1": "./usr/share/doc/python-brian-doc/docs/_sources/reference/brian2.input.timedarray.TimedArray.rst.txt", "source2": "./usr/share/doc/python-brian-doc/docs/_sources/reference/brian2.input.timedarray.TimedArray.rst.txt", "comments": ["Ordering differences only"], "unified_diff": "@@ -7,13 +7,13 @@\n \n .. autoclass:: TimedArray\n \n Tutorials and examples using this\n ---------------------------------\n \n * Tutorial :doc:`3-intro-to-brian-simulations `\n-* Example :doc:`frompapers/Brunel_Wang_2001 `\n+* Example :doc:`synapses/jeffress `\n * Example :doc:`frompapers/Sturzl_et_al_2000 `\n-* Example :doc:`frompapers/Stimberg_et_al_2018/example_6_COBA_with_astro `\n+* Example :doc:`frompapers/Brunel_Wang_2001 `\n * Example :doc:`frompapers/Stimberg_et_al_2018/example_4_synrel `\n-* Example :doc:`synapses/jeffress `\n+* Example :doc:`frompapers/Stimberg_et_al_2018/example_6_COBA_with_astro `\n \n"}, {"source1": "./usr/share/doc/python-brian-doc/docs/_sources/reference/brian2.monitors.ratemonitor.PopulationRateMonitor.rst.txt", "source2": "./usr/share/doc/python-brian-doc/docs/_sources/reference/brian2.monitors.ratemonitor.PopulationRateMonitor.rst.txt", "comments": ["Ordering differences only"], "unified_diff": "@@ -6,10 +6,10 @@\n (*Shortest import*: ``from brian2 import PopulationRateMonitor)``\n \n .. autoclass:: PopulationRateMonitor\n \n Tutorials and examples using this\n ---------------------------------\n \n-* Example :doc:`frompapers/Brunel_Wang_2001 `\n * Example :doc:`frompapers/Brunel_Hakim_1999 `\n+* Example :doc:`frompapers/Brunel_Wang_2001 `\n \n"}, {"source1": "./usr/share/doc/python-brian-doc/docs/_sources/reference/brian2.monitors.spikemonitor.SpikeMonitor.rst.txt", "source2": "./usr/share/doc/python-brian-doc/docs/_sources/reference/brian2.monitors.spikemonitor.SpikeMonitor.rst.txt", "comments": ["Ordering differences only"], "unified_diff": "@@ -6,40 +6,40 @@\n (*Shortest import*: ``from brian2 import SpikeMonitor)``\n \n .. autoclass:: SpikeMonitor\n \n Tutorials and examples using this\n ---------------------------------\n \n-* Tutorial :doc:`1-intro-to-brian-neurons `\n * Tutorial :doc:`3-intro-to-brian-simulations `\n-* Example :doc:`IF_curve_LIF `\n-* Example :doc:`adaptive_threshold `\n+* Tutorial :doc:`1-intro-to-brian-neurons `\n+* Example :doc:`reliability `\n+* Example :doc:`non_reliability `\n * Example :doc:`phase_locking `\n * Example :doc:`CUBA `\n+* Example :doc:`adaptive_threshold `\n+* Example :doc:`IF_curve_LIF `\n * Example :doc:`IF_curve_Hodgkin_Huxley `\n-* Example :doc:`non_reliability `\n-* Example :doc:`reliability `\n-* Example :doc:`advanced/custom_events `\n-* Example :doc:`advanced/opencv_movie `\n+* Example :doc:`standalone/STDP_standalone `\n+* Example :doc:`standalone/cuba_openmp `\n+* Example :doc:`synapses/jeffress `\n+* Example :doc:`synapses/licklider `\n+* Example :doc:`synapses/STDP `\n * Example :doc:`frompapers/Brette_2004 `\n+* Example :doc:`frompapers/Vogels_et_al_2011 `\n+* Example :doc:`frompapers/Brunel_Hakim_1999 `\n * Example :doc:`frompapers/Rossant_et_al_2011bis `\n-* Example :doc:`frompapers/Brunel_Wang_2001 `\n * Example :doc:`frompapers/Diesmann_et_al_1999 `\n+* Example :doc:`frompapers/Sturzl_et_al_2000 `\n * Example :doc:`frompapers/Brette_Gerstner_2005 `\n-* Example :doc:`frompapers/Platkiewicz_Brette_2011 `\n+* Example :doc:`frompapers/Brunel_Wang_2001 `\n+* Example :doc:`frompapers/Touboul_Brette_2008 `\n * Example :doc:`frompapers/Brette_Guigon_2003 `\n-* Example :doc:`frompapers/Brunel_Hakim_1999 `\n * Example :doc:`frompapers/Izhikevich_2007 `\n-* Example :doc:`frompapers/Sturzl_et_al_2000 `\n-* Example :doc:`frompapers/Touboul_Brette_2008 `\n-* Example :doc:`frompapers/Vogels_et_al_2011 `\n-* Example :doc:`frompapers/Stimberg_et_al_2018/example_1_COBA `\n-* Example :doc:`frompapers/Stimberg_et_al_2018/example_6_COBA_with_astro `\n+* Example :doc:`frompapers/Platkiewicz_Brette_2011 `\n * Example :doc:`frompapers/Brette_2012/Fig5A `\n-* Example :doc:`synapses/STDP `\n-* Example :doc:`synapses/licklider `\n-* Example :doc:`synapses/jeffress `\n-* Example :doc:`standalone/cuba_openmp `\n-* Example :doc:`standalone/STDP_standalone `\n+* Example :doc:`frompapers/Stimberg_et_al_2018/example_6_COBA_with_astro `\n+* Example :doc:`frompapers/Stimberg_et_al_2018/example_1_COBA `\n * Example :doc:`compartmental/hh_with_spikes `\n+* Example :doc:`advanced/opencv_movie `\n+* Example :doc:`advanced/custom_events `\n \n"}, {"source1": "./usr/share/doc/python-brian-doc/docs/_sources/reference/brian2.monitors.statemonitor.StateMonitor.rst.txt", "source2": "./usr/share/doc/python-brian-doc/docs/_sources/reference/brian2.monitors.statemonitor.StateMonitor.rst.txt", "comments": ["Ordering differences only"], "unified_diff": "@@ -6,54 +6,54 @@\n (*Shortest import*: ``from brian2 import StateMonitor)``\n \n .. autoclass:: StateMonitor\n \n Tutorials and examples using this\n ---------------------------------\n \n+* Tutorial :doc:`3-intro-to-brian-simulations `\n * Tutorial :doc:`1-intro-to-brian-neurons `\n * Tutorial :doc:`2-intro-to-brian-synapses `\n-* Tutorial :doc:`3-intro-to-brian-simulations `\n-* Example :doc:`adaptive_threshold `\n-* Example :doc:`phase_locking `\n * Example :doc:`COBAHH `\n-* Example :doc:`advanced/custom_events `\n-* Example :doc:`advanced/stochastic_odes `\n-* Example :doc:`advanced/compare_GSL_to_conventional `\n-* Example :doc:`frompapers/Wang_Buszaki_1996 `\n-* Example :doc:`frompapers/Rossant_et_al_2011bis `\n-* Example :doc:`frompapers/Destexhe_et_al_1998 `\n-* Example :doc:`frompapers/Hindmarsh_Rose_1984 `\n-* Example :doc:`frompapers/Brette_Gerstner_2005 `\n-* Example :doc:`frompapers/Platkiewicz_Brette_2011 `\n+* Example :doc:`phase_locking `\n+* Example :doc:`adaptive_threshold `\n+* Example :doc:`standalone/STDP_standalone `\n+* Example :doc:`synapses/synapses `\n+* Example :doc:`synapses/jeffress `\n+* Example :doc:`synapses/gapjunctions `\n+* Example :doc:`synapses/STDP `\n+* Example :doc:`synapses/nonlinear `\n * Example :doc:`frompapers/Rothman_Manis_2003 `\n+* Example :doc:`frompapers/Destexhe_et_al_1998 `\n+* Example :doc:`frompapers/Rossant_et_al_2011bis `\n * Example :doc:`frompapers/Morris_Lecar_1981 `\n-* Example :doc:`frompapers/Brette_Guigon_2003 `\n-* Example :doc:`frompapers/Izhikevich_2007 `\n+* Example :doc:`frompapers/Brette_Gerstner_2005 `\n+* Example :doc:`frompapers/Wang_Buszaki_1996 `\n * Example :doc:`frompapers/Clopath_et_al_2010_homeostasis `\n * Example :doc:`frompapers/Touboul_Brette_2008 `\n-* Example :doc:`frompapers/Stimberg_et_al_2018/example_2_gchi_astrocyte `\n-* Example :doc:`frompapers/Stimberg_et_al_2018/example_1_COBA `\n-* Example :doc:`frompapers/Stimberg_et_al_2018/example_5_astro_ring `\n-* Example :doc:`frompapers/Stimberg_et_al_2018/example_4_synrel `\n-* Example :doc:`frompapers/Stimberg_et_al_2018/example_4_rsmean `\n-* Example :doc:`frompapers/Stimberg_et_al_2018/example_3_io_synapse `\n-* Example :doc:`frompapers/Brette_2012/Fig3CF `\n+* Example :doc:`frompapers/Brette_Guigon_2003 `\n+* Example :doc:`frompapers/Hindmarsh_Rose_1984 `\n+* Example :doc:`frompapers/Izhikevich_2007 `\n+* Example :doc:`frompapers/Platkiewicz_Brette_2011 `\n * Example :doc:`frompapers/Brette_2012/Fig5A `\n-* Example :doc:`frompapers/Brette_2012/Fig4 `\n-* Example :doc:`frompapers/Brette_2012/Fig3AB `\n * Example :doc:`frompapers/Brette_2012/Fig1 `\n-* Example :doc:`synapses/nonlinear `\n-* Example :doc:`synapses/gapjunctions `\n-* Example :doc:`synapses/synapses `\n-* Example :doc:`synapses/STDP `\n-* Example :doc:`synapses/jeffress `\n-* Example :doc:`standalone/STDP_standalone `\n+* Example :doc:`frompapers/Brette_2012/Fig3AB `\n+* Example :doc:`frompapers/Brette_2012/Fig4 `\n+* Example :doc:`frompapers/Brette_2012/Fig3CF `\n+* Example :doc:`frompapers/Stimberg_et_al_2018/example_4_rsmean `\n+* Example :doc:`frompapers/Stimberg_et_al_2018/example_3_io_synapse `\n+* Example :doc:`frompapers/Stimberg_et_al_2018/example_4_synrel `\n+* Example :doc:`frompapers/Stimberg_et_al_2018/example_1_COBA `\n+* Example :doc:`frompapers/Stimberg_et_al_2018/example_5_astro_ring `\n+* Example :doc:`frompapers/Stimberg_et_al_2018/example_2_gchi_astrocyte `\n * Example :doc:`compartmental/lfp `\n-* Example :doc:`compartmental/hodgkin_huxley_1952 `\n-* Example :doc:`compartmental/bipolar_with_inputs2 `\n-* Example :doc:`compartmental/bipolar_with_inputs `\n-* Example :doc:`compartmental/spike_initiation `\n * Example :doc:`compartmental/infinite_cable `\n * Example :doc:`compartmental/hh_with_spikes `\n+* Example :doc:`compartmental/hodgkin_huxley_1952 `\n+* Example :doc:`compartmental/spike_initiation `\n+* Example :doc:`compartmental/bipolar_with_inputs2 `\n * Example :doc:`compartmental/bipolar_cell `\n+* Example :doc:`compartmental/bipolar_with_inputs `\n+* Example :doc:`advanced/stochastic_odes `\n+* Example :doc:`advanced/compare_GSL_to_conventional `\n+* Example :doc:`advanced/custom_events `\n \n"}, {"source1": "./usr/share/doc/python-brian-doc/docs/_sources/reference/brian2.spatialneuron.morphology.Cylinder.rst.txt", "source2": "./usr/share/doc/python-brian-doc/docs/_sources/reference/brian2.spatialneuron.morphology.Cylinder.rst.txt", "comments": ["Ordering differences only"], "unified_diff": "@@ -7,23 +7,23 @@\n \n .. autoclass:: Cylinder\n \n Tutorials and examples using this\n ---------------------------------\n \n * Example :doc:`frompapers/Destexhe_et_al_1998 `\n-* Example :doc:`frompapers/Brette_2012/Fig3CF `\n * Example :doc:`frompapers/Brette_2012/Fig5A `\n-* Example :doc:`frompapers/Brette_2012/Fig3AB `\n * Example :doc:`frompapers/Brette_2012/Fig1 `\n-* Example :doc:`compartmental/lfp `\n-* Example :doc:`compartmental/hodgkin_huxley_1952 `\n-* Example :doc:`compartmental/bipolar_with_inputs2 `\n-* Example :doc:`compartmental/bipolar_with_inputs `\n+* Example :doc:`frompapers/Brette_2012/Fig3AB `\n+* Example :doc:`frompapers/Brette_2012/Fig3CF `\n * Example :doc:`compartmental/rall `\n-* Example :doc:`compartmental/spike_initiation `\n+* Example :doc:`compartmental/lfp `\n * Example :doc:`compartmental/infinite_cable `\n-* Example :doc:`compartmental/morphotest `\n * Example :doc:`compartmental/cylinder `\n * Example :doc:`compartmental/hh_with_spikes `\n+* Example :doc:`compartmental/hodgkin_huxley_1952 `\n+* Example :doc:`compartmental/spike_initiation `\n+* Example :doc:`compartmental/bipolar_with_inputs2 `\n+* Example :doc:`compartmental/morphotest `\n * Example :doc:`compartmental/bipolar_cell `\n+* Example :doc:`compartmental/bipolar_with_inputs `\n \n"}, {"source1": "./usr/share/doc/python-brian-doc/docs/_sources/reference/brian2.spatialneuron.morphology.Morphology.rst.txt", "source2": "./usr/share/doc/python-brian-doc/docs/_sources/reference/brian2.spatialneuron.morphology.Morphology.rst.txt", "comments": ["Ordering differences only"], "unified_diff": "@@ -6,21 +6,21 @@\n (*Shortest import*: ``from brian2 import Morphology)``\n \n .. autoclass:: Morphology\n \n Tutorials and examples using this\n ---------------------------------\n \n-* Example :doc:`frompapers/Brette_2012/Fig3CF `\n * Example :doc:`frompapers/Brette_2012/Fig5A `\n-* Example :doc:`frompapers/Brette_2012/Fig4 `\n-* Example :doc:`frompapers/Brette_2012/Fig3AB `\n * Example :doc:`frompapers/Brette_2012/Fig1 `\n-* Example :doc:`compartmental/bipolar_with_inputs2 `\n-* Example :doc:`compartmental/bipolar_with_inputs `\n+* Example :doc:`frompapers/Brette_2012/Fig3AB `\n+* Example :doc:`frompapers/Brette_2012/Fig4 `\n+* Example :doc:`frompapers/Brette_2012/Fig3CF `\n * Example :doc:`compartmental/rall `\n-* Example :doc:`compartmental/spike_initiation `\n * Example :doc:`compartmental/infinite_cable `\n-* Example :doc:`compartmental/morphotest `\n * Example :doc:`compartmental/cylinder `\n+* Example :doc:`compartmental/spike_initiation `\n+* Example :doc:`compartmental/bipolar_with_inputs2 `\n+* Example :doc:`compartmental/morphotest `\n * Example :doc:`compartmental/bipolar_cell `\n+* Example :doc:`compartmental/bipolar_with_inputs `\n \n"}, {"source1": "./usr/share/doc/python-brian-doc/docs/_sources/reference/brian2.spatialneuron.morphology.Soma.rst.txt", "source2": "./usr/share/doc/python-brian-doc/docs/_sources/reference/brian2.spatialneuron.morphology.Soma.rst.txt", "comments": ["Ordering differences only"], "unified_diff": "@@ -6,18 +6,18 @@\n (*Shortest import*: ``from brian2 import Soma)``\n \n .. autoclass:: Soma\n \n Tutorials and examples using this\n ---------------------------------\n \n-* Example :doc:`frompapers/Brette_2012/Fig3CF `\n * Example :doc:`frompapers/Brette_2012/Fig5A `\n-* Example :doc:`frompapers/Brette_2012/Fig4 `\n-* Example :doc:`frompapers/Brette_2012/Fig3AB `\n * Example :doc:`frompapers/Brette_2012/Fig1 `\n-* Example :doc:`compartmental/bipolar_with_inputs2 `\n-* Example :doc:`compartmental/bipolar_with_inputs `\n+* Example :doc:`frompapers/Brette_2012/Fig3AB `\n+* Example :doc:`frompapers/Brette_2012/Fig4 `\n+* Example :doc:`frompapers/Brette_2012/Fig3CF `\n * Example :doc:`compartmental/spike_initiation `\n+* Example :doc:`compartmental/bipolar_with_inputs2 `\n * Example :doc:`compartmental/morphotest `\n * Example :doc:`compartmental/bipolar_cell `\n+* Example :doc:`compartmental/bipolar_with_inputs `\n \n"}, {"source1": "./usr/share/doc/python-brian-doc/docs/_sources/reference/brian2.spatialneuron.spatialneuron.SpatialNeuron.rst.txt", "source2": "./usr/share/doc/python-brian-doc/docs/_sources/reference/brian2.spatialneuron.spatialneuron.SpatialNeuron.rst.txt", "comments": ["Ordering differences only"], "unified_diff": "@@ -7,24 +7,24 @@\n \n .. autoclass:: SpatialNeuron\n \n Tutorials and examples using this\n ---------------------------------\n \n * Example :doc:`frompapers/Destexhe_et_al_1998 `\n-* Example :doc:`frompapers/Brette_2012/Fig3CF `\n * Example :doc:`frompapers/Brette_2012/Fig5A `\n-* Example :doc:`frompapers/Brette_2012/Fig4 `\n-* Example :doc:`frompapers/Brette_2012/Fig3AB `\n * Example :doc:`frompapers/Brette_2012/Fig1 `\n-* Example :doc:`compartmental/lfp `\n-* Example :doc:`compartmental/hodgkin_huxley_1952 `\n-* Example :doc:`compartmental/bipolar_with_inputs2 `\n-* Example :doc:`compartmental/bipolar_with_inputs `\n+* Example :doc:`frompapers/Brette_2012/Fig3AB `\n+* Example :doc:`frompapers/Brette_2012/Fig4 `\n+* Example :doc:`frompapers/Brette_2012/Fig3CF `\n * Example :doc:`compartmental/rall `\n-* Example :doc:`compartmental/spike_initiation `\n+* Example :doc:`compartmental/lfp `\n * Example :doc:`compartmental/infinite_cable `\n-* Example :doc:`compartmental/morphotest `\n * Example :doc:`compartmental/cylinder `\n * Example :doc:`compartmental/hh_with_spikes `\n+* Example :doc:`compartmental/hodgkin_huxley_1952 `\n+* Example :doc:`compartmental/spike_initiation `\n+* Example :doc:`compartmental/bipolar_with_inputs2 `\n+* Example :doc:`compartmental/morphotest `\n * Example :doc:`compartmental/bipolar_cell `\n+* Example :doc:`compartmental/bipolar_with_inputs `\n \n"}, {"source1": "./usr/share/doc/python-brian-doc/docs/_sources/reference/brian2.synapses.synapses.Synapses.rst.txt", "source2": "./usr/share/doc/python-brian-doc/docs/_sources/reference/brian2.synapses.synapses.Synapses.rst.txt", "comments": ["Ordering differences only"], "unified_diff": "@@ -6,47 +6,47 @@\n (*Shortest import*: ``from brian2 import Synapses)``\n \n .. autoclass:: Synapses\n \n Tutorials and examples using this\n ---------------------------------\n \n+* Tutorial :doc:`3-intro-to-brian-simulations `\n * Tutorial :doc:`1-intro-to-brian-neurons `\n * Tutorial :doc:`2-intro-to-brian-synapses `\n-* Tutorial :doc:`3-intro-to-brian-simulations `\n-* Example :doc:`adaptive_threshold `\n-* Example :doc:`CUBA `\n * Example :doc:`COBAHH `\n-* Example :doc:`advanced/custom_events `\n-* Example :doc:`advanced/float_32_64_benchmark `\n-* Example :doc:`frompapers/Kremer_et_al_2011_barrel_cortex `\n-* Example :doc:`frompapers/Brunel_Wang_2001 `\n-* Example :doc:`frompapers/Diesmann_et_al_1999 `\n-* Example :doc:`frompapers/Clopath_et_al_2010_no_homeostasis `\n+* Example :doc:`CUBA `\n+* Example :doc:`adaptive_threshold `\n+* Example :doc:`standalone/STDP_standalone `\n+* Example :doc:`standalone/cuba_openmp `\n+* Example :doc:`synapses/synapses `\n+* Example :doc:`synapses/jeffress `\n+* Example :doc:`synapses/gapjunctions `\n+* Example :doc:`synapses/spatial_connections `\n+* Example :doc:`synapses/licklider `\n+* Example :doc:`synapses/efficient_gaussian_connectivity `\n+* Example :doc:`synapses/STDP `\n+* Example :doc:`synapses/state_variables `\n+* Example :doc:`synapses/nonlinear `\n+* Example :doc:`frompapers/Vogels_et_al_2011 `\n * Example :doc:`frompapers/Brunel_Hakim_1999 `\n-* Example :doc:`frompapers/Izhikevich_2007 `\n+* Example :doc:`frompapers/Diesmann_et_al_1999 `\n * Example :doc:`frompapers/Sturzl_et_al_2000 `\n+* Example :doc:`frompapers/Brunel_Wang_2001 `\n * Example :doc:`frompapers/Clopath_et_al_2010_homeostasis `\n-* Example :doc:`frompapers/Vogels_et_al_2011 `\n-* Example :doc:`frompapers/Stimberg_et_al_2018/example_2_gchi_astrocyte `\n-* Example :doc:`frompapers/Stimberg_et_al_2018/example_1_COBA `\n-* Example :doc:`frompapers/Stimberg_et_al_2018/example_5_astro_ring `\n-* Example :doc:`frompapers/Stimberg_et_al_2018/example_6_COBA_with_astro `\n-* Example :doc:`frompapers/Stimberg_et_al_2018/example_4_synrel `\n+* Example :doc:`frompapers/Kremer_et_al_2011_barrel_cortex `\n+* Example :doc:`frompapers/Izhikevich_2007 `\n+* Example :doc:`frompapers/Clopath_et_al_2010_no_homeostasis `\n+* Example :doc:`frompapers/Brette_2012/Fig5A `\n * Example :doc:`frompapers/Stimberg_et_al_2018/example_4_rsmean `\n * Example :doc:`frompapers/Stimberg_et_al_2018/example_3_io_synapse `\n-* Example :doc:`frompapers/Brette_2012/Fig5A `\n-* Example :doc:`synapses/nonlinear `\n-* Example :doc:`synapses/gapjunctions `\n-* Example :doc:`synapses/efficient_gaussian_connectivity `\n-* Example :doc:`synapses/synapses `\n-* Example :doc:`synapses/STDP `\n-* Example :doc:`synapses/licklider `\n-* Example :doc:`synapses/jeffress `\n-* Example :doc:`synapses/state_variables `\n-* Example :doc:`synapses/spatial_connections `\n-* Example :doc:`standalone/cuba_openmp `\n-* Example :doc:`standalone/STDP_standalone `\n+* Example :doc:`frompapers/Stimberg_et_al_2018/example_4_synrel `\n+* Example :doc:`frompapers/Stimberg_et_al_2018/example_6_COBA_with_astro `\n+* Example :doc:`frompapers/Stimberg_et_al_2018/example_1_COBA `\n+* Example :doc:`frompapers/Stimberg_et_al_2018/example_5_astro_ring `\n+* Example :doc:`frompapers/Stimberg_et_al_2018/example_2_gchi_astrocyte `\n * Example :doc:`compartmental/lfp `\n * Example :doc:`compartmental/bipolar_with_inputs2 `\n * Example :doc:`compartmental/bipolar_with_inputs `\n+* Example :doc:`advanced/float_32_64_benchmark `\n+* Example :doc:`advanced/custom_events `\n \n"}, {"source1": "./usr/share/doc/python-brian-doc/docs/reference/brian2.core.clocks.Clock.html", "source2": "./usr/share/doc/python-brian-doc/docs/reference/brian2.core.clocks.Clock.html", "comments": ["Ordering differences only"], "unified_diff": "@@ -116,16 +116,16 @@\n \n \n \n \n
\n \n \n \n \n \n", "details": [{"source1": "html2text {}", "source2": "html2text {}", "unified_diff": "@@ -41,16 +41,16 @@\n considered identical.\n set_interval(self, start, end)\u00c2\u00b6\n Set the start and end time of the simulation.\n Sets the start and end value of the clock precisely if possible\n (using epsilon) or rounding up if not. This assures that multiple\n calls to Network.run will not re-run the same time step.\n ***** Tutorials and examples using this\u00c2\u00b6 *****\n- * Example CUBA\n * Example COBAHH\n+ * Example CUBA\n [Logo]\n ****** Brian_2 ******\n **** Navigation ****\n * Introduction\n * User\u00e2\u0080\u0099s_guide\n * Advanced_guide\n * Examples\n"}]}, {"source1": "./usr/share/doc/python-brian-doc/docs/reference/brian2.core.functions.exprel.html", "source2": "./usr/share/doc/python-brian-doc/docs/reference/brian2.core.functions.exprel.html", "comments": ["Ordering differences only"], "unified_diff": "@@ -71,22 +71,22 @@\n \n \n \n \nExample IF_curve_Hodgkin_Huxley
Example COBAHH
Example advanced/float_32_64_benchmark
Example advanced/exprel_function
Example IF_curve_Hodgkin_Huxley
Example frompapers/Wang_Buszaki_1996
Example compartmental/lfp
Example compartmental/hh_with_spikes
Example advanced/exprel_function
Example advanced/float_32_64_benchmark
Tutorial 3-intro-to-brian-simulations
Example IF_curve_LIF
Example IF_curve_Hodgkin_Huxley
Example frompapers/Brunel_Wang_2001
Example advanced/stochastic_odes
Example frompapers/Brunel_Wang_2001
Example advanced/exprel_function
Example frompapers/Stimberg_et_al_2018/example_2_gchi_astrocyte
Example advanced/exprel_function
Example IF_curve_Hodgkin_Huxley
Example COBAHH
Example advanced/float_32_64_benchmark
Example frompapers/Rossant_et_al_2011bis
Example IF_curve_Hodgkin_Huxley
Example frompapers/Destexhe_et_al_1998
Example frompapers/Rossant_et_al_2011bis
Example frompapers/Diesmann_et_al_1999
Example frompapers/Hindmarsh_Rose_1984
Example advanced/float_32_64_benchmark
Tutorial 3-intro-to-brian-simulations
Tutorial 1-intro-to-brian-neurons
Tutorial 2-intro-to-brian-synapses
Tutorial 3-intro-to-brian-simulations
Example IF_curve_LIF
Example adaptive_threshold
Example reliability
Example COBAHH
Example non_reliability
Example phase_locking
Example CUBA
Example adaptive_threshold
Example IF_curve_LIF
Example IF_curve_Hodgkin_Huxley
Example non_reliability
Example reliability
Example COBAHH
Example advanced/custom_events
Example advanced/float_32_64_benchmark
Example advanced/stochastic_odes
Example advanced/opencv_movie
Example advanced/exprel_function
Example standalone/STDP_standalone
Example standalone/cuba_openmp
Example synapses/synapses
Example synapses/jeffress
Example synapses/gapjunctions
Example synapses/spatial_connections
Example synapses/licklider
Example synapses/STDP
Example synapses/state_variables
Example synapses/nonlinear
Example frompapers/Rothman_Manis_2003
Example frompapers/Brette_2004
Example frompapers/Wang_Buszaki_1996
Example frompapers/Vogels_et_al_2011
Example frompapers/Brunel_Hakim_1999
Example frompapers/Rossant_et_al_2011bis
Example frompapers/Brunel_Wang_2001
Example frompapers/Diesmann_et_al_1999
Example frompapers/Hindmarsh_Rose_1984
Example frompapers/Brette_Gerstner_2005
Example frompapers/Rothman_Manis_2003
Example frompapers/Morris_Lecar_1981
Example frompapers/Brette_Guigon_2003
Example frompapers/Brunel_Hakim_1999
Example frompapers/Izhikevich_2007
Example frompapers/Diesmann_et_al_1999
Example frompapers/Sturzl_et_al_2000
Example frompapers/Brette_Gerstner_2005
Example frompapers/Wang_Buszaki_1996
Example frompapers/Brunel_Wang_2001
Example frompapers/Touboul_Brette_2008
Example frompapers/Vogels_et_al_2011
Example frompapers/Stimberg_et_al_2018/example_2_gchi_astrocyte
Example frompapers/Stimberg_et_al_2018/example_6_COBA_with_astro
Example frompapers/Brette_Guigon_2003
Example frompapers/Hindmarsh_Rose_1984
Example frompapers/Izhikevich_2007
Example synapses/nonlinear
Example synapses/gapjunctions
Example synapses/synapses
Example synapses/STDP
Example synapses/licklider
Example synapses/jeffress
Example synapses/state_variables
Example synapses/spatial_connections
Example standalone/cuba_openmp
Example standalone/STDP_standalone
Example frompapers/Stimberg_et_al_2018/example_6_COBA_with_astro
Example frompapers/Stimberg_et_al_2018/example_2_gchi_astrocyte
Example compartmental/lfp
Example advanced/exprel_function
Example advanced/opencv_movie
Example advanced/stochastic_odes
Example advanced/float_32_64_benchmark
Example advanced/custom_events
Tutorial 3-intro-to-brian-simulations
Example adaptive_threshold
Example advanced/custom_events
Example synapses/STDP
Example standalone/STDP_standalone
Example synapses/STDP
Example advanced/custom_events
Tutorial 3-intro-to-brian-simulations
Example frompapers/Brunel_Wang_2001
Example synapses/jeffress
Example frompapers/Sturzl_et_al_2000
Example frompapers/Stimberg_et_al_2018/example_6_COBA_with_astro
Example frompapers/Brunel_Wang_2001
Example synapses/jeffress
Example frompapers/Stimberg_et_al_2018/example_6_COBA_with_astro
Example frompapers/Brunel_Wang_2001
Example frompapers/Brunel_Hakim_1999
Example frompapers/Brunel_Wang_2001
Tutorial 1-intro-to-brian-neurons
Tutorial 3-intro-to-brian-simulations
Example IF_curve_LIF
Example adaptive_threshold
Tutorial 1-intro-to-brian-neurons
Example reliability
Example non_reliability
Example phase_locking
Example CUBA
Example adaptive_threshold
Example IF_curve_LIF
Example IF_curve_Hodgkin_Huxley
Example non_reliability
Example reliability
Example advanced/custom_events
Example advanced/opencv_movie
Example standalone/STDP_standalone
Example standalone/cuba_openmp
Example synapses/jeffress
Example synapses/licklider
Example synapses/STDP
Example frompapers/Brette_2004
Example frompapers/Vogels_et_al_2011
Example frompapers/Brunel_Hakim_1999
Example frompapers/Rossant_et_al_2011bis
Example frompapers/Brunel_Wang_2001
Example frompapers/Diesmann_et_al_1999
Example frompapers/Sturzl_et_al_2000
Example frompapers/Brette_Gerstner_2005
Example frompapers/Brunel_Wang_2001
Example frompapers/Touboul_Brette_2008
Example frompapers/Brette_Guigon_2003
Example frompapers/Brunel_Hakim_1999
Example frompapers/Izhikevich_2007
Example frompapers/Sturzl_et_al_2000
Example frompapers/Touboul_Brette_2008
Example frompapers/Vogels_et_al_2011
Example frompapers/Stimberg_et_al_2018/example_6_COBA_with_astro
Example frompapers/Brette_2012/Fig5A
Example synapses/STDP
Example synapses/licklider
Example synapses/jeffress
Example standalone/cuba_openmp
Example standalone/STDP_standalone
Example frompapers/Stimberg_et_al_2018/example_6_COBA_with_astro
Example compartmental/hh_with_spikes
Example advanced/opencv_movie
Example advanced/custom_events
Tutorial 3-intro-to-brian-simulations
Tutorial 1-intro-to-brian-neurons
Tutorial 2-intro-to-brian-synapses
Tutorial 3-intro-to-brian-simulations
Example adaptive_threshold
Example phase_locking
Example COBAHH
Example advanced/custom_events
Example advanced/stochastic_odes
Example frompapers/Wang_Buszaki_1996
Example frompapers/Rossant_et_al_2011bis
Example frompapers/Destexhe_et_al_1998
Example frompapers/Hindmarsh_Rose_1984
Example frompapers/Brette_Gerstner_2005
Example phase_locking
Example adaptive_threshold
Example standalone/STDP_standalone
Example synapses/synapses
Example synapses/jeffress
Example synapses/gapjunctions
Example synapses/STDP
Example synapses/nonlinear
Example frompapers/Rothman_Manis_2003
Example frompapers/Destexhe_et_al_1998
Example frompapers/Rossant_et_al_2011bis
Example frompapers/Morris_Lecar_1981
Example frompapers/Brette_Guigon_2003
Example frompapers/Izhikevich_2007
Example frompapers/Brette_Gerstner_2005
Example frompapers/Wang_Buszaki_1996
Example frompapers/Touboul_Brette_2008
Example frompapers/Stimberg_et_al_2018/example_2_gchi_astrocyte
Example frompapers/Brette_2012/Fig3CF
Example frompapers/Brette_Guigon_2003
Example frompapers/Hindmarsh_Rose_1984
Example frompapers/Izhikevich_2007
Example frompapers/Brette_2012/Fig5A
Example frompapers/Brette_2012/Fig4
Example frompapers/Brette_2012/Fig3AB
Example frompapers/Brette_2012/Fig1
Example synapses/nonlinear
Example synapses/gapjunctions
Example synapses/synapses
Example synapses/STDP
Example synapses/jeffress
Example standalone/STDP_standalone
Example frompapers/Brette_2012/Fig3AB
Example frompapers/Brette_2012/Fig4
Example frompapers/Brette_2012/Fig3CF
Example frompapers/Stimberg_et_al_2018/example_2_gchi_astrocyte
Example compartmental/lfp
Example compartmental/spike_initiation
Example compartmental/infinite_cable
Example compartmental/hh_with_spikes
Example compartmental/spike_initiation
Example compartmental/bipolar_cell
Example advanced/stochastic_odes
Example advanced/custom_events
Example frompapers/Destexhe_et_al_1998
Example frompapers/Brette_2012/Fig3CF
Example frompapers/Brette_2012/Fig5A
Example frompapers/Brette_2012/Fig3AB
Example frompapers/Brette_2012/Fig1
Example compartmental/lfp
Example frompapers/Brette_2012/Fig3AB
Example frompapers/Brette_2012/Fig3CF
Example compartmental/rall
Example compartmental/spike_initiation
Example compartmental/lfp
Example compartmental/infinite_cable
Example compartmental/morphotest
Example compartmental/cylinder
Example compartmental/hh_with_spikes
Example compartmental/spike_initiation
Example compartmental/morphotest
Example compartmental/bipolar_cell
Example frompapers/Brette_2012/Fig3CF
Example frompapers/Brette_2012/Fig5A
Example frompapers/Brette_2012/Fig4
Example frompapers/Brette_2012/Fig3AB
Example frompapers/Brette_2012/Fig1
Example frompapers/Brette_2012/Fig3AB
Example frompapers/Brette_2012/Fig4
Example frompapers/Brette_2012/Fig3CF
Example compartmental/rall
Example compartmental/spike_initiation
Example compartmental/infinite_cable
Example compartmental/morphotest
Example compartmental/cylinder
Example compartmental/spike_initiation
Example compartmental/morphotest
Example compartmental/bipolar_cell
Example frompapers/Brette_2012/Fig3CF
Example frompapers/Brette_2012/Fig5A
Example frompapers/Brette_2012/Fig4
Example frompapers/Brette_2012/Fig3AB
Example frompapers/Brette_2012/Fig1
Example frompapers/Brette_2012/Fig3AB
Example frompapers/Brette_2012/Fig4
Example frompapers/Brette_2012/Fig3CF
Example compartmental/spike_initiation
Example compartmental/morphotest
Example compartmental/bipolar_cell
Example frompapers/Destexhe_et_al_1998
Example frompapers/Brette_2012/Fig3CF
Example frompapers/Brette_2012/Fig5A
Example frompapers/Brette_2012/Fig4
Example frompapers/Brette_2012/Fig3AB
Example frompapers/Brette_2012/Fig1
Example compartmental/lfp
Example frompapers/Brette_2012/Fig3AB
Example frompapers/Brette_2012/Fig4
Example frompapers/Brette_2012/Fig3CF
Example compartmental/rall
Example compartmental/spike_initiation
Example compartmental/lfp
Example compartmental/infinite_cable
Example compartmental/morphotest
Example compartmental/cylinder
Example compartmental/hh_with_spikes
Example compartmental/spike_initiation
Example compartmental/morphotest
Example compartmental/bipolar_cell
Tutorial 3-intro-to-brian-simulations
Tutorial 1-intro-to-brian-neurons
Tutorial 2-intro-to-brian-synapses
Tutorial 3-intro-to-brian-simulations
Example adaptive_threshold
Example CUBA
Example COBAHH
Example advanced/custom_events
Example advanced/float_32_64_benchmark
Example frompapers/Brunel_Wang_2001
Example frompapers/Diesmann_et_al_1999
Example CUBA
Example adaptive_threshold
Example standalone/STDP_standalone
Example standalone/cuba_openmp
Example synapses/synapses
Example synapses/jeffress
Example synapses/gapjunctions
Example synapses/spatial_connections
Example synapses/licklider
Example synapses/STDP
Example synapses/state_variables
Example synapses/nonlinear
Example frompapers/Vogels_et_al_2011
Example frompapers/Brunel_Hakim_1999
Example frompapers/Izhikevich_2007
Example frompapers/Diesmann_et_al_1999
Example frompapers/Sturzl_et_al_2000
Example frompapers/Brunel_Wang_2001
Example frompapers/Vogels_et_al_2011
Example frompapers/Stimberg_et_al_2018/example_2_gchi_astrocyte
Example frompapers/Stimberg_et_al_2018/example_6_COBA_with_astro
Example frompapers/Izhikevich_2007
Example frompapers/Brette_2012/Fig5A
Example frompapers/Brette_2012/Fig5A
Example synapses/nonlinear
Example synapses/gapjunctions
Example synapses/synapses
Example synapses/STDP
Example synapses/licklider
Example synapses/jeffress
Example synapses/state_variables
Example synapses/spatial_connections
Example standalone/cuba_openmp
Example standalone/STDP_standalone
Example frompapers/Stimberg_et_al_2018/example_6_COBA_with_astro
Example frompapers/Stimberg_et_al_2018/example_2_gchi_astrocyte
Example compartmental/lfp
Example advanced/float_32_64_benchmark
Example advanced/custom_events