45.6 KB
/srv/reproducible-results/rbuild-debian/tmp.XnxZmPI9Qu/b1/r-cran-survmisc_0.5.5-3_arm64.changes vs.
/srv/reproducible-results/rbuild-debian/tmp.XnxZmPI9Qu/b2/r-cran-survmisc_0.5.5-3_arm64.changes
206 B
Files
    
Offset 1, 2 lines modifiedOffset 1, 2 lines modified
  
1 ·d736be7a8c4b6380f4e26952f7351bbb·334164·gnu-r·optional·r-cran-survmisc_0.5.5-3_all.deb1 ·4309ad318256c33af39d0e2e35b1b723·334360·gnu-r·optional·r-cran-survmisc_0.5.5-3_all.deb
45.2 KB
r-cran-survmisc_0.5.5-3_all.deb
452 B
file list
    
Offset 1, 3 lines modifiedOffset 1, 3 lines modified
1 -rw-r--r--···0········0········0········4·2020-05-20·08:25:46.000000·debian-binary1 -rw-r--r--···0········0········0········4·2020-05-20·08:25:46.000000·debian-binary
2 -rw-r--r--···0········0········0·····1516·2020-05-20·08:25:46.000000·control.tar.xz2 -rw-r--r--···0········0········0·····1512·2020-05-20·08:25:46.000000·control.tar.xz
3 -rw-r--r--···0········0········0···332456·2020-05-20·08:25:46.000000·data.tar.xz3 -rw-r--r--···0········0········0···332656·2020-05-20·08:25:46.000000·data.tar.xz
98.0 B
control.tar.xz
70.0 B
control.tar
48.0 B
./md5sums
30.0 B
./md5sums
Files differ
44.6 KB
data.tar.xz
44.6 KB
data.tar
4.65 KB
file list
    
Offset 15, 31 lines modifiedOffset 15, 31 lines modified
15 -rw-r--r--···0·root·········(0)·root·········(0)······884·2020-05-20·08:25:46.000000·./usr/lib/R/site-library/survMisc/Meta/nsInfo.rds15 -rw-r--r--···0·root·········(0)·root·········(0)······884·2020-05-20·08:25:46.000000·./usr/lib/R/site-library/survMisc/Meta/nsInfo.rds
16 -rw-r--r--···0·root·········(0)·root·········(0)·····1068·2020-05-20·08:25:46.000000·./usr/lib/R/site-library/survMisc/Meta/package.rds16 -rw-r--r--···0·root·········(0)·root·········(0)·····1068·2020-05-20·08:25:46.000000·./usr/lib/R/site-library/survMisc/Meta/package.rds
17 -rw-r--r--···0·root·········(0)·root·········(0)······187·2020-05-20·08:25:46.000000·./usr/lib/R/site-library/survMisc/Meta/vignette.rds17 -rw-r--r--···0·root·········(0)·root·········(0)······187·2020-05-20·08:25:46.000000·./usr/lib/R/site-library/survMisc/Meta/vignette.rds
18 -rw-r--r--···0·root·········(0)·root·········(0)·····2504·2020-05-20·08:25:46.000000·./usr/lib/R/site-library/survMisc/NAMESPACE18 -rw-r--r--···0·root·········(0)·root·········(0)·····2504·2020-05-20·08:25:46.000000·./usr/lib/R/site-library/survMisc/NAMESPACE
19 -rw-r--r--···0·root·········(0)·root·········(0)·····5173·2020-05-20·08:25:46.000000·./usr/lib/R/site-library/survMisc/NEWS.Rd19 -rw-r--r--···0·root·········(0)·root·········(0)·····5173·2020-05-20·08:25:46.000000·./usr/lib/R/site-library/survMisc/NEWS.Rd
20 drwxr-xr-x···0·root·········(0)·root·········(0)········0·2020-05-20·08:25:46.000000·./usr/lib/R/site-library/survMisc/R/20 drwxr-xr-x···0·root·········(0)·root·········(0)········0·2020-05-20·08:25:46.000000·./usr/lib/R/site-library/survMisc/R/
21 -rw-r--r--···0·root·········(0)·root·········(0)·····1058·2020-05-20·08:25:46.000000·./usr/lib/R/site-library/survMisc/R/survMisc21 -rw-r--r--···0·root·········(0)·root·········(0)·····1058·2020-05-20·08:25:46.000000·./usr/lib/R/site-library/survMisc/R/survMisc
22 -rw-r--r--···0·root·········(0)·root·········(0)···133157·2020-05-20·08:25:46.000000·./usr/lib/R/site-library/survMisc/R/survMisc.rdb22 -rw-r--r--···0·root·········(0)·root·········(0)···133159·2020-05-20·08:25:46.000000·./usr/lib/R/site-library/survMisc/R/survMisc.rdb
23 -rw-r--r--···0·root·········(0)·root·········(0)·····1499·2020-05-20·08:25:46.000000·./usr/lib/R/site-library/survMisc/R/survMisc.rdx23 -rw-r--r--···0·root·········(0)·root·········(0)·····1501·2020-05-20·08:25:46.000000·./usr/lib/R/site-library/survMisc/R/survMisc.rdx
24 drwxr-xr-x···0·root·········(0)·root·········(0)········0·2020-05-20·08:25:46.000000·./usr/lib/R/site-library/survMisc/data/24 drwxr-xr-x···0·root·········(0)·root·········(0)········0·2020-05-20·08:25:46.000000·./usr/lib/R/site-library/survMisc/data/
25 -rw-r--r--···0·root·········(0)·root·········(0)······446·2020-05-20·08:25:46.000000·./usr/lib/R/site-library/survMisc/data/Rdata.rdb25 -rw-r--r--···0·root·········(0)·root·········(0)······446·2020-05-20·08:25:46.000000·./usr/lib/R/site-library/survMisc/data/Rdata.rdb
26 -rw-r--r--···0·root·········(0)·root·········(0)·······90·2020-05-20·08:25:46.000000·./usr/lib/R/site-library/survMisc/data/Rdata.rds26 -rw-r--r--···0·root·········(0)·root·········(0)·······90·2020-05-20·08:25:46.000000·./usr/lib/R/site-library/survMisc/data/Rdata.rds
27 -rw-r--r--···0·root·········(0)·root·········(0)······158·2020-05-20·08:25:46.000000·./usr/lib/R/site-library/survMisc/data/Rdata.rdx27 -rw-r--r--···0·root·········(0)·root·········(0)······158·2020-05-20·08:25:46.000000·./usr/lib/R/site-library/survMisc/data/Rdata.rdx
28 drwxr-xr-x···0·root·········(0)·root·········(0)········0·2020-05-20·08:25:46.000000·./usr/lib/R/site-library/survMisc/doc/28 drwxr-xr-x···0·root·········(0)·root·········(0)········0·2020-05-20·08:25:46.000000·./usr/lib/R/site-library/survMisc/doc/
29 -rw-r--r--···0·root·········(0)·root·········(0)·····1432·2020-05-20·08:25:46.000000·./usr/lib/R/site-library/survMisc/doc/index.html29 -rw-r--r--···0·root·········(0)·root·········(0)·····1432·2020-05-20·08:25:46.000000·./usr/lib/R/site-library/survMisc/doc/index.html
30 -rw-r--r--···0·root·········(0)·root·········(0)·····4310·2020-05-20·08:25:46.000000·./usr/lib/R/site-library/survMisc/doc/plots.R30 -rw-r--r--···0·root·········(0)·root·········(0)·····4310·2020-05-20·08:25:46.000000·./usr/lib/R/site-library/survMisc/doc/plots.R
31 -rw-r--r--···0·root·········(0)·root·········(0)·····5460·2020-05-20·08:25:46.000000·./usr/lib/R/site-library/survMisc/doc/plots.Rnw31 -rw-r--r--···0·root·········(0)·root·········(0)·····5460·2020-05-20·08:25:46.000000·./usr/lib/R/site-library/survMisc/doc/plots.Rnw
32 -rw-r--r--···0·root·········(0)·root·········(0)····83170·2020-05-20·08:25:46.000000·./usr/lib/R/site-library/survMisc/doc/plots.pdf32 -rw-r--r--···0·root·········(0)·root·········(0)····83170·2020-05-20·08:25:46.000000·./usr/lib/R/site-library/survMisc/doc/plots.pdf
33 drwxr-xr-x···0·root·········(0)·root·········(0)········0·2020-05-20·08:25:46.000000·./usr/lib/R/site-library/survMisc/help/33 drwxr-xr-x···0·root·········(0)·root·········(0)········0·2020-05-20·08:25:46.000000·./usr/lib/R/site-library/survMisc/help/
34 -rw-r--r--···0·root·········(0)·root·········(0)·····1065·2020-05-20·08:25:46.000000·./usr/lib/R/site-library/survMisc/help/AnIndex34 -rw-r--r--···0·root·········(0)·root·········(0)·····1065·2020-05-20·08:25:46.000000·./usr/lib/R/site-library/survMisc/help/AnIndex
35 -rw-r--r--···0·root·········(0)·root·········(0)······508·2020-05-20·08:25:46.000000·./usr/lib/R/site-library/survMisc/help/aliases.rds35 -rw-r--r--···0·root·········(0)·root·········(0)······508·2020-05-20·08:25:46.000000·./usr/lib/R/site-library/survMisc/help/aliases.rds
36 -rw-r--r--···0·root·········(0)·root·········(0)······265·2020-05-20·08:25:46.000000·./usr/lib/R/site-library/survMisc/help/paths.rds36 -rw-r--r--···0·root·········(0)·root·········(0)······268·2020-05-20·08:25:46.000000·./usr/lib/R/site-library/survMisc/help/paths.rds
37 -rw-r--r--···0·root·········(0)·root·········(0)···102252·2020-05-20·08:25:46.000000·./usr/lib/R/site-library/survMisc/help/survMisc.rdb37 -rw-r--r--···0·root·········(0)·root·········(0)···102307·2020-05-20·08:25:46.000000·./usr/lib/R/site-library/survMisc/help/survMisc.rdb
38 -rw-r--r--···0·root·········(0)·root·········(0)······551·2020-05-20·08:25:46.000000·./usr/lib/R/site-library/survMisc/help/survMisc.rdx38 -rw-r--r--···0·root·········(0)·root·········(0)······556·2020-05-20·08:25:46.000000·./usr/lib/R/site-library/survMisc/help/survMisc.rdx
39 drwxr-xr-x···0·root·········(0)·root·········(0)········0·2020-05-20·08:25:46.000000·./usr/lib/R/site-library/survMisc/html/39 drwxr-xr-x···0·root·········(0)·root·········(0)········0·2020-05-20·08:25:46.000000·./usr/lib/R/site-library/survMisc/html/
40 -rw-r--r--···0·root·········(0)·root·········(0)·····8992·2020-05-20·08:25:46.000000·./usr/lib/R/site-library/survMisc/html/00Index.html40 -rw-r--r--···0·root·········(0)·root·········(0)·····8992·2020-05-20·08:25:46.000000·./usr/lib/R/site-library/survMisc/html/00Index.html
41 -rw-r--r--···0·root·········(0)·root·········(0)·····1335·2020-05-20·08:25:46.000000·./usr/lib/R/site-library/survMisc/html/R.css41 -rw-r--r--···0·root·········(0)·root·········(0)·····1335·2020-05-20·08:25:46.000000·./usr/lib/R/site-library/survMisc/html/R.css
42 drwxr-xr-x···0·root·········(0)·root·········(0)········0·2020-05-20·08:25:46.000000·./usr/share/42 drwxr-xr-x···0·root·········(0)·root·········(0)········0·2020-05-20·08:25:46.000000·./usr/share/
43 drwxr-xr-x···0·root·········(0)·root·········(0)········0·2020-05-20·08:25:46.000000·./usr/share/doc/43 drwxr-xr-x···0·root·········(0)·root·········(0)········0·2020-05-20·08:25:46.000000·./usr/share/doc/
44 drwxr-xr-x···0·root·········(0)·root·········(0)········0·2020-05-20·08:25:46.000000·./usr/share/doc/r-cran-survmisc/44 drwxr-xr-x···0·root·········(0)·root·········(0)········0·2020-05-20·08:25:46.000000·./usr/share/doc/r-cran-survmisc/
45 -rw-r--r--···0·root·········(0)·root·········(0)······274·2020-05-20·08:25:46.000000·./usr/share/doc/r-cran-survmisc/changelog.Debian.gz45 -rw-r--r--···0·root·········(0)·root·········(0)······274·2020-05-20·08:25:46.000000·./usr/share/doc/r-cran-survmisc/changelog.Debian.gz
1.09 KB
./usr/lib/R/site-library/survMisc/R/survMisc.rdb
1020 B
Rscript --vanilla - {}
    
Offset 317, 15 lines modifiedOffset 317, 15 lines modified
317 ····"imports"·=·"····stats·=·c(printCoefmat·=·"printCoefmat"),·stats·=·c(qchisq·=·"qchisq"),·"317 ····"imports"·=·"····stats·=·c(printCoefmat·=·"printCoefmat"),·stats·=·c(qchisq·=·"qchisq"),·"
318 ····"imports"·=·"····stats·=·c(qnorm·=·"qnorm"),·stats·=·c(runif·=·"runif"),·stats·=·c(terms·=·"terms"),·"318 ····"imports"·=·"····stats·=·c(qnorm·=·"qnorm"),·stats·=·c(runif·=·"runif"),·stats·=·c(terms·=·"terms"),·"
319 ····"imports"·=·"····stats·=·c(update·=·"update"),·utils·=·c(combn·=·"combn"),·"319 ····"imports"·=·"····stats·=·c(update·=·"update"),·utils·=·c(combn·=·"combn"),·"
320 ····"imports"·=·"····utils·=·c(data·=·"data"),·utils·=·c(head·=·"head"),·utils·=·c(packageVersion·=·"packageVersion"),·"320 ····"imports"·=·"····utils·=·c(data·=·"data"),·utils·=·c(head·=·"head"),·utils·=·c(packageVersion·=·"packageVersion"),·"
321 ····"imports"·=·"····utils·=·c(tail·=·"tail"),·xtable·=·c(print.xtable·=·"print.xtable"),·"321 ····"imports"·=·"····utils·=·c(tail·=·"tail"),·xtable·=·c(print.xtable·=·"print.xtable"),·"
322 ····"imports"·=·"····xtable·=·c(xtable·=·"xtable"),·zoo·=·c(na.locf.default·=·"na.locf.default"))"322 ····"imports"·=·"····xtable·=·c(xtable·=·"xtable"),·zoo·=·c(na.locf.default·=·"na.locf.default"))"
323 ····"lazydata"·=·"<environment>"323 ····"lazydata"·=·"<environment>"
324 ····"path"·=·""/build/1st/r-cran-survmisc-0.5.5/debian/r-cran-survmisc/usr/lib/R/site-library/survMisc""324 ····"path"·=·""/build/2/r-cran-survmisc-0.5.5/2nd/debian/r-cran-survmisc/usr/lib/R/site-library/survMisc""
325 ····"spec"·=·"c(name·=·"survMisc",·version·=·"0.5.5")"325 ····"spec"·=·"c(name·=·"survMisc",·version·=·"0.5.5")"
326 }326 }
  
327 .__S3MethodsTable__.·(environment)·=·327 .__S3MethodsTable__.·(environment)·=·
328 {328 {
329 }329 }
  
7.29 KB
./usr/lib/R/site-library/survMisc/R/survMisc.rdx
7.19 KB
survMisc.rdx-content
7.15 KB
Rscript --vanilla -e 'args <- commandArgs(TRUE); readRDS(args[1])' {}
    
Offset 1, 388 lines modifiedOffset 1, 388 lines modified
1 $variables1 $variables
2 $variables$.SD2 $variables$.SD
3 [1]··0·453 [1]··0·45
  
4 $variables$.__NAMESPACE__.4 $variables$.__NAMESPACE__.
5 [1]·5955···625 [1]·5957···62
  
6 $variables$.__S3MethodsTable__.6 $variables$.__S3MethodsTable__.
7 [1]·6157···627 [1]·6159···62
  
8 $variables$.onAttach8 $variables$.onAttach
9 [1]·6219··4349 [1]·6221··434
  
10 $variables$.packageName10 $variables$.packageName
11 [1]·6653···6211 [1]·6655···62
  
12 $variables$ASI12 $variables$ASI
13 [1]·6715··78213 [1]·6717··782
  
14 $variables$COV14 $variables$COV
15 [1]·7497··18815 [1]·7499··188
  
16 $variables$COV.numeric16 $variables$COV.numeric
17 [1]·7685·255817 [1]·7687·2558
  
18 $variables$COV.stratTen18 $variables$COV.stratTen
19 [1]·10243···36119 [1]·10245···361
  
20 $variables$COV.ten20 $variables$COV.ten
21 [1]·10604··510421 [1]·10606··5104
  
22 $variables$H22 $variables$H
23 [1]·15708····4523 [1]·15710····45
  
24 $variables$Hx24 $variables$Hx
25 [1]·15753····4525 [1]·15755····45
  
26 $variables$LIN26 $variables$LIN
27 [1]·15798···58627 [1]·15800···586
  
28 $variables$LOG28 $variables$LOG
29 [1]·16384···66729 [1]·16386···667
  
30 $variables$P30 $variables$P
31 [1]·17051····4531 [1]·17053····45
  
32 $variables$Q32 $variables$Q
33 [1]·17096····4533 [1]·17098····45
  
34 $variables$S34 $variables$S
35 [1]·17141····4535 [1]·17143····45
  
36 $variables$S136 $variables$S1
37 [1]·17186····4537 [1]·17188····45
  
38 $variables$SCV38 $variables$SCV
39 [1]·17231····4539 [1]·17233····45
  
40 $variables$Sv40 $variables$Sv
41 [1]·17276····4541 [1]·17278····45
  
42 $variables$U42 $variables$U
43 [1]·17321····4543 [1]·17323····45
  
44 $variables$V144 $variables$V1
45 [1]·17366····4545 [1]·17368····45
  
46 $variables$Var46 $variables$Var
47 [1]·17411····4547 [1]·17413····45
  
48 $variables$Z48 $variables$Z
49 [1]·17456····4549 [1]·17458····45
  
50 $variables$abbNames50 $variables$abbNames
51 [1]·17501····4551 [1]·17503····45
  
52 $variables$asLong52 $variables$asLong
53 [1]·17546···19153 [1]·17548···191
  
54 $variables$asLong.ten54 $variables$asLong.ten
55 [1]·17737··257855 [1]·17739··2578
  
56 $variables$asWide56 $variables$asWide
57 [1]·20315···19057 [1]·20317···190
  
58 $variables$asWide.ten58 $variables$asWide.ten
59 [1]·20505··325859 [1]·20507··3258
  
60 $variables$autoplot60 $variables$autoplot
61 [1]·23763···19661 [1]·23765···196
  
62 $variables$autoplot.stratTen62 $variables$autoplot.stratTen
63 [1]·23959··216063 [1]·23961··2160
  
64 $variables$autoplot.survfit64 $variables$autoplot.survfit
65 [1]·26119·1082765 [1]·26121·10827
  
66 $variables$autoplot.tableAndPlot66 $variables$autoplot.tableAndPlot
67 [1]·36946··210667 [1]·36948··2106
  
68 $variables$autoplot.ten68 $variables$autoplot.ten
69 [1]·39052·1040769 [1]·39054·10407
  
70 $variables$cg70 $variables$cg
71 [1]·49459····4571 [1]·49461····45
  
72 $variables$cg_72 $variables$cg_
73 [1]·49504····4573 [1]·49506····45
  
74 $variables$chiSq74 $variables$chiSq
75 [1]·49549····4575 [1]·49551····45
  
76 $variables$ci76 $variables$ci
77 [1]·49594···18877 [1]·49596···188
  
78 $variables$ci.stratTen78 $variables$ci.stratTen
79 [1]·49782···47779 [1]·49784···477
  
80 $variables$ci.ten80 $variables$ci.ten
81 [1]·50259··617081 [1]·50261··6170
  
82 $variables$collapseDT82 $variables$collapseDT
83 [1]·56429··135583 [1]·56431··1355
  
84 $variables$comp84 $variables$comp
85 [1]·57784···19085 [1]·57786···190
  
Max diff block lines reached; 4848/7186 bytes (67.46%) of diff not shown.
2.63 KB
./usr/lib/R/site-library/survMisc/help/paths.rds
2.54 KB
paths.rds-content
2.5 KB
Rscript --vanilla -e 'args <- commandArgs(TRUE); readRDS(args[1])' {}
    
Offset 1, 20 lines modifiedOffset 1, 20 lines modified
1 ·[1]·"/build/1st/r-cran-survmisc-0.5.5/man/COV.Rd"·············1 ·[1]·"/build/2/r-cran-survmisc-0.5.5/2nd/man/COV.Rd"·············
2 ·[2]·"/build/1st/r-cran-survmisc-0.5.5/man/asWide.Rd"··········2 ·[2]·"/build/2/r-cran-survmisc-0.5.5/2nd/man/asWide.Rd"··········
3 ·[3]·"/build/1st/r-cran-survmisc-0.5.5/man/autoplotTAP.Rd"·····3 ·[3]·"/build/2/r-cran-survmisc-0.5.5/2nd/man/autoplotTAP.Rd"·····
4 ·[4]·"/build/1st/r-cran-survmisc-0.5.5/man/autoplotTen.Rd"·····4 ·[4]·"/build/2/r-cran-survmisc-0.5.5/2nd/man/autoplotTen.Rd"·····
5 ·[5]·"/build/1st/r-cran-survmisc-0.5.5/man/ci.Rd"··············5 ·[5]·"/build/2/r-cran-survmisc-0.5.5/2nd/man/ci.Rd"··············
6 ·[6]·"/build/1st/r-cran-survmisc-0.5.5/man/comp.Rd"············6 ·[6]·"/build/2/r-cran-survmisc-0.5.5/2nd/man/comp.Rd"············
7 ·[7]·"/build/1st/r-cran-survmisc-0.5.5/man/cutp.Rd"············7 ·[7]·"/build/2/r-cran-survmisc-0.5.5/2nd/man/cutp.Rd"············
8 ·[8]·"/build/1st/r-cran-survmisc-0.5.5/man/gastric.Rd"·········8 ·[8]·"/build/2/r-cran-survmisc-0.5.5/2nd/man/gastric.Rd"·········
9 ·[9]·"/build/1st/r-cran-survmisc-0.5.5/man/gof.Rd"·············9 ·[9]·"/build/2/r-cran-survmisc-0.5.5/2nd/man/gof.Rd"·············
10 [10]·"/build/1st/r-cran-survmisc-0.5.5/man/nc.Rd"··············10 [10]·"/build/2/r-cran-survmisc-0.5.5/2nd/man/nc.Rd"··············
11 [11]·"/build/1st/r-cran-survmisc-0.5.5/man/predict.Rd"·········11 [11]·"/build/2/r-cran-survmisc-0.5.5/2nd/man/predict.Rd"·········
12 [12]·"/build/1st/r-cran-survmisc-0.5.5/man/print.Rd"···········12 [12]·"/build/2/r-cran-survmisc-0.5.5/2nd/man/print.Rd"···········
13 [13]·"/build/1st/r-cran-survmisc-0.5.5/man/profLik.Rd"·········13 [13]·"/build/2/r-cran-survmisc-0.5.5/2nd/man/profLik.Rd"·········
14 [14]·"/build/1st/r-cran-survmisc-0.5.5/man/rsq.Rd"·············14 [14]·"/build/2/r-cran-survmisc-0.5.5/2nd/man/rsq.Rd"·············
15 [15]·"/build/1st/r-cran-survmisc-0.5.5/man/sf.Rd"··············15 [15]·"/build/2/r-cran-survmisc-0.5.5/2nd/man/sf.Rd"··············
16 [16]·"/build/1st/r-cran-survmisc-0.5.5/man/survMisc_package.Rd"16 [16]·"/build/2/r-cran-survmisc-0.5.5/2nd/man/survMisc_package.Rd"
17 [17]·"/build/1st/r-cran-survmisc-0.5.5/man/ten.Rd"·············17 [17]·"/build/2/r-cran-survmisc-0.5.5/2nd/man/ten.Rd"·············
18 [18]·"/build/1st/r-cran-survmisc-0.5.5/man/xtable.Rd"··········18 [18]·"/build/2/r-cran-survmisc-0.5.5/2nd/man/xtable.Rd"··········
19 attr(,"first")19 attr(,"first")
20 [1]·3820 [1]·40
26.6 KB
./usr/lib/R/site-library/survMisc/help/survMisc.rdb
26.5 KB
Rscript --vanilla - {}
    
Offset 169, 15 lines modifiedOffset 169, 15 lines modified
169 ············structure("rowSums(COV(l1),·dims=2)\n",·Rd_tag·=·"VERB")),·Rd_tag·=·"\\dontrun"),·169 ············structure("rowSums(COV(l1),·dims=2)\n",·Rd_tag·=·"VERB")),·Rd_tag·=·"\\dontrun"),·
170 ········structure("\n",·Rd_tag·=·"RCODE"),·structure("##·example·of·numeric·method\n",·Rd_tag·=·"RCODE"),·170 ········structure("\n",·Rd_tag·=·"RCODE"),·structure("##·example·of·numeric·method\n",·Rd_tag·=·"RCODE"),·
171 ········structure("##·Three·covariate·groups\n",·Rd_tag·=·"RCODE"),·171 ········structure("##·Three·covariate·groups\n",·Rd_tag·=·"RCODE"),·
172 ········structure("##·K&M.·Example·7.4,·pg·212.\n",·Rd_tag·=·"RCODE"),·172 ········structure("##·K&M.·Example·7.4,·pg·212.\n",·Rd_tag·=·"RCODE"),·
173 ········structure(list(structure("\n",·Rd_tag·=·"VERB"),·structure("data(\"bmt\",·package=\"KMsurv\")\n",·Rd_tag·=·"VERB"),·173 ········structure(list(structure("\n",·Rd_tag·=·"VERB"),·structure("data(\"bmt\",·package=\"KMsurv\")\n",·Rd_tag·=·"VERB"),·
174 ············structure("b1·<-·asWide(ten(Surv(time=t2,·event=d3)·~·group,·data=bmt))\n",·Rd_tag·=·"VERB"),·174 ············structure("b1·<-·asWide(ten(Surv(time=t2,·event=d3)·~·group,·data=bmt))\n",·Rd_tag·=·"VERB"),·
175 ············structure("rowSums(b1[,·COV(x=e,·n=n,·ncg=matrix(data=c(n_1,·n_2,·n_3),·ncol=3))],·dims=2)\n",·Rd_tag·=·"VERB")),·Rd_tag·=·"\\dontrun"),·175 ············structure("rowSums(b1[,·COV(x=e,·n=n,·ncg=matrix(data=c(n_1,·n_2,·n_3),·ncol=3))],·dims=2)\n",·Rd_tag·=·"VERB")),·Rd_tag·=·"\\dontrun"),·
176 ········structure("\n",·Rd_tag·=·"RCODE")),·Rd_tag·=·"\\examples")),·Rdfile·=·"/build/1st/r-cran-survmisc-0.5.5/man/COV.Rd",·class·=·"Rd",·meta·=·list(176 ········structure("\n",·Rd_tag·=·"RCODE")),·Rd_tag·=·"\\examples")),·Rdfile·=·"/build/2/r-cran-survmisc-0.5.5/2nd/man/COV.Rd",·class·=·"Rd",·meta·=·list(
177 ····docType·=·character(0)),·prepared·=·3L)177 ····docType·=·character(0)),·prepared·=·3L)
  
178 asWide·(list)·=·structure(list(structure(list(structure("Convert·an·object·to·\"wide\"·or·\"long\"·form.",·Rd_tag·=·"TEXT")),·Rd_tag·=·"\\title"),·178 asWide·(list)·=·structure(list(structure(list(structure("Convert·an·object·to·\"wide\"·or·\"long\"·form.",·Rd_tag·=·"TEXT")),·Rd_tag·=·"\\title"),·
179 ····structure(list(structure("asWide",·Rd_tag·=·"VERB")),·Rd_tag·=·"\\name"),·179 ····structure(list(structure("asWide",·Rd_tag·=·"VERB")),·Rd_tag·=·"\\name"),·
180 ····structure(list(structure("asWide",·Rd_tag·=·"VERB")),·Rd_tag·=·"\\alias"),·180 ····structure(list(structure("asWide",·Rd_tag·=·"VERB")),·Rd_tag·=·"\\alias"),·
181 ····structure(list(structure("asWide.ten",·Rd_tag·=·"VERB")),·Rd_tag·=·"\\alias"),·181 ····structure(list(structure("asWide.ten",·Rd_tag·=·"VERB")),·Rd_tag·=·"\\alias"),·
182 ····structure(list(structure("asLong",·Rd_tag·=·"VERB")),·Rd_tag·=·"\\alias"),·182 ····structure(list(structure("asLong",·Rd_tag·=·"VERB")),·Rd_tag·=·"\\alias"),·
Offset 243, 15 lines modifiedOffset 243, 15 lines modified
243 ········structure("\n",·Rd_tag·=·"VERB"),·structure("data(\"bmt\",·package=\"KMsurv\")\n",·Rd_tag·=·"VERB"),·243 ········structure("\n",·Rd_tag·=·"VERB"),·structure("data(\"bmt\",·package=\"KMsurv\")\n",·Rd_tag·=·"VERB"),·
244 ········structure("require(\"survival\")\n",·Rd_tag·=·"VERB"),·244 ········structure("require(\"survival\")\n",·Rd_tag·=·"VERB"),·
245 ········structure("t1·<-·ten(c1·<-·coxph(Surv(t2,·d3)·~·z3*z10,·data=bmt))\n",·Rd_tag·=·"VERB"),·245 ········structure("t1·<-·ten(c1·<-·coxph(Surv(t2,·d3)·~·z3*z10,·data=bmt))\n",·Rd_tag·=·"VERB"),·
246 ········structure("asWide(t1)\n",·Rd_tag·=·"VERB")),·Rd_tag·=·"\\dontrun"),·246 ········structure("asWide(t1)\n",·Rd_tag·=·"VERB")),·Rd_tag·=·"\\dontrun"),·
247 ········structure("\n",·Rd_tag·=·"RCODE"),·structure(list(structure("\n",·Rd_tag·=·"VERB"),·247 ········structure("\n",·Rd_tag·=·"RCODE"),·structure(list(structure("\n",·Rd_tag·=·"VERB"),·
248 ············structure("asLong(asWide(t1))\n",·Rd_tag·=·"VERB"),·248 ············structure("asLong(asWide(t1))\n",·Rd_tag·=·"VERB"),·
249 ············structure("stopifnot(asLong(asWide(t1))·==·ten(ten(t1)))\n",·Rd_tag·=·"VERB")),·Rd_tag·=·"\\dontrun"),·249 ············structure("stopifnot(asLong(asWide(t1))·==·ten(ten(t1)))\n",·Rd_tag·=·"VERB")),·Rd_tag·=·"\\dontrun"),·
250 ········structure("\n",·Rd_tag·=·"RCODE")),·Rd_tag·=·"\\examples")),·Rdfile·=·"/build/1st/r-cran-survmisc-0.5.5/man/asWide.Rd",·class·=·"Rd",·meta·=·list(250 ········structure("\n",·Rd_tag·=·"RCODE")),·Rd_tag·=·"\\examples")),·Rdfile·=·"/build/2/r-cran-survmisc-0.5.5/2nd/man/asWide.Rd",·class·=·"Rd",·meta·=·list(
251 ····docType·=·character(0)),·prepared·=·3L)251 ····docType·=·character(0)),·prepared·=·3L)
  
252 autoplotTAP·(list)·=·structure(list(structure(list(structure("Arrange·a·survival·plot·with·corresponding·table·and·legend.",·Rd_tag·=·"TEXT")),·Rd_tag·=·"\\title"),·252 autoplotTAP·(list)·=·structure(list(structure(list(structure("Arrange·a·survival·plot·with·corresponding·table·and·legend.",·Rd_tag·=·"TEXT")),·Rd_tag·=·"\\title"),·
253 ····structure(list(structure("autoplotTableAndPlot",·Rd_tag·=·"VERB")),·Rd_tag·=·"\\name"),·253 ····structure(list(structure("autoplotTableAndPlot",·Rd_tag·=·"VERB")),·Rd_tag·=·"\\name"),·
254 ····structure(list(structure("autoplotTableAndPlot",·Rd_tag·=·"VERB")),·Rd_tag·=·"\\alias"),·254 ····structure(list(structure("autoplotTableAndPlot",·Rd_tag·=·"VERB")),·Rd_tag·=·"\\alias"),·
255 ····structure(list(structure("autoplot.tableAndPlot",·Rd_tag·=·"VERB")),·Rd_tag·=·"\\alias"),·255 ····structure(list(structure("autoplot.tableAndPlot",·Rd_tag·=·"VERB")),·Rd_tag·=·"\\alias"),·
256 ····structure(list(structure("graphics",·Rd_tag·=·"TEXT")),·Rd_tag·=·"\\keyword"),·256 ····structure(list(structure("graphics",·Rd_tag·=·"TEXT")),·Rd_tag·=·"\\keyword"),·
Offset 306, 15 lines modifiedOffset 306, 15 lines modified
306 ····structure(list(structure("\n",·Rd_tag·=·"RCODE"),·structure(list(306 ····structure(list(structure("\n",·Rd_tag·=·"RCODE"),·structure(list(
307 ········structure("\n",·Rd_tag·=·"VERB"),·structure("data(\"kidney\",·package=\"KMsurv\")\n",·Rd_tag·=·"VERB"),·307 ········structure("\n",·Rd_tag·=·"VERB"),·structure("data(\"kidney\",·package=\"KMsurv\")\n",·Rd_tag·=·"VERB"),·
308 ········structure("autoplot(survfit(Surv(time,·delta)·~·type,·data=kidney),·type=\"fill\")\n",·Rd_tag·=·"VERB"),·308 ········structure("autoplot(survfit(Surv(time,·delta)·~·type,·data=kidney),·type=\"fill\")\n",·Rd_tag·=·"VERB"),·
309 ········structure("autoplot(ten(survfit(Surv(time,·delta)·~·type,·data=kidney)),·type=\"fill\")\n",·Rd_tag·=·"VERB"),·309 ········structure("autoplot(ten(survfit(Surv(time,·delta)·~·type,·data=kidney)),·type=\"fill\")\n",·Rd_tag·=·"VERB"),·
310 ········structure("data(\"bmt\",·package=\"KMsurv\")\n",·Rd_tag·=·"VERB"),·310 ········structure("data(\"bmt\",·package=\"KMsurv\")\n",·Rd_tag·=·"VERB"),·
311 ········structure("s2·<-·survfit(Surv(time=t2,·event=d3)·~·group,·data=bmt)\n",·Rd_tag·=·"VERB"),·311 ········structure("s2·<-·survfit(Surv(time=t2,·event=d3)·~·group,·data=bmt)\n",·Rd_tag·=·"VERB"),·
312 ········structure("autoplot(s2)\n",·Rd_tag·=·"VERB")),·Rd_tag·=·"\\dontrun"),·312 ········structure("autoplot(s2)\n",·Rd_tag·=·"VERB")),·Rd_tag·=·"\\dontrun"),·
313 ········structure("\n",·Rd_tag·=·"RCODE")),·Rd_tag·=·"\\examples")),·Rdfile·=·"/build/1st/r-cran-survmisc-0.5.5/man/autoplotTAP.Rd",·class·=·"Rd",·meta·=·list(313 ········structure("\n",·Rd_tag·=·"RCODE")),·Rd_tag·=·"\\examples")),·Rdfile·=·"/build/2/r-cran-survmisc-0.5.5/2nd/man/autoplotTAP.Rd",·class·=·"Rd",·meta·=·list(
314 ····docType·=·character(0)),·prepared·=·3L)314 ····docType·=·character(0)),·prepared·=·3L)
  
315 autoplotTen·(list)·=·structure(list(structure(list(structure("Generate·a·",·Rd_tag·=·"TEXT"),·315 autoplotTen·(list)·=·structure(list(structure(list(structure("Generate·a·",·Rd_tag·=·"TEXT"),·
316 ····structure(list(structure("ggplot",·Rd_tag·=·"RCODE")),·Rd_tag·=·"\\code"),·316 ····structure(list(structure("ggplot",·Rd_tag·=·"RCODE")),·Rd_tag·=·"\\code"),·
317 ····structure("·for·a·",·Rd_tag·=·"TEXT"),·structure(list(structure("survfit",·Rd_tag·=·"RCODE")),·Rd_tag·=·"\\code"),·317 ····structure("·for·a·",·Rd_tag·=·"TEXT"),·structure(list(structure("survfit",·Rd_tag·=·"RCODE")),·Rd_tag·=·"\\code"),·
318 ····structure("·or·",·Rd_tag·=·"TEXT"),·structure(list(structure("ten",·Rd_tag·=·"RCODE")),·Rd_tag·=·"\\code"),·318 ····structure("·or·",·Rd_tag·=·"TEXT"),·structure(list(structure("ten",·Rd_tag·=·"RCODE")),·Rd_tag·=·"\\code"),·
319 ····structure("·object",·Rd_tag·=·"TEXT")),·Rd_tag·=·"\\title"),·319 ····structure("·object",·Rd_tag·=·"TEXT")),·Rd_tag·=·"\\title"),·
Offset 728, 15 lines modifiedOffset 728, 15 lines modified
728 ············structure("s1·<-·survfit(Surv(time,·delta)·~·type,·data=kidney)\n",·Rd_tag·=·"VERB"),·728 ············structure("s1·<-·survfit(Surv(time,·delta)·~·type,·data=kidney)\n",·Rd_tag·=·"VERB"),·
729 ············structure("g1·<-·autoplot(s1,·type=\"CI\",·alpha=0.8,·survLineSize=2)$plot\n",·Rd_tag·=·"VERB"),·729 ············structure("g1·<-·autoplot(s1,·type=\"CI\",·alpha=0.8,·survLineSize=2)$plot\n",·Rd_tag·=·"VERB"),·
730 ············structure("##·change·default·colors\n",·Rd_tag·=·"VERB"),·730 ············structure("##·change·default·colors\n",·Rd_tag·=·"VERB"),·
731 ············structure("g1·+·ggplot2::scale_colour_manual(values=c(\"red\",·\"blue\"))·+\n",·Rd_tag·=·"VERB"),·731 ············structure("g1·+·ggplot2::scale_colour_manual(values=c(\"red\",·\"blue\"))·+\n",·Rd_tag·=·"VERB"),·
732 ············structure("····ggplot2::scale_fill_manual(values=c(\"red\",·\"blue\"))\n",·Rd_tag·=·"VERB"),·732 ············structure("····ggplot2::scale_fill_manual(values=c(\"red\",·\"blue\"))\n",·Rd_tag·=·"VERB"),·
733 ············structure("##·change·limits·of·y-axis\n",·Rd_tag·=·"VERB"),·733 ············structure("##·change·limits·of·y-axis\n",·Rd_tag·=·"VERB"),·
734 ············structure("g1·+·ggplot2::scale_y_continuous(limits=c(0,·1))\n",·Rd_tag·=·"VERB")),·Rd_tag·=·"\\dontrun"),·734 ············structure("g1·+·ggplot2::scale_y_continuous(limits=c(0,·1))\n",·Rd_tag·=·"VERB")),·Rd_tag·=·"\\dontrun"),·
735 ········structure("\n",·Rd_tag·=·"RCODE")),·Rd_tag·=·"\\examples")),·Rdfile·=·"/build/1st/r-cran-survmisc-0.5.5/man/autoplotTen.Rd",·class·=·"Rd",·meta·=·list(735 ········structure("\n",·Rd_tag·=·"RCODE")),·Rd_tag·=·"\\examples")),·Rdfile·=·"/build/2/r-cran-survmisc-0.5.5/2nd/man/autoplotTen.Rd",·class·=·"Rd",·meta·=·list(
736 ····docType·=·character(0)),·prepared·=·3L)736 ····docType·=·character(0)),·prepared·=·3L)
  
737 ci·(list)·=·structure(list(structure(list(structure(list(structure("c",·Rd_tag·=·"TEXT")),·Rd_tag·=·"\\bold"),·737 ci·(list)·=·structure(list(structure(list(structure(list(structure("c",·Rd_tag·=·"TEXT")),·Rd_tag·=·"\\bold"),·
738 ····structure("onfidence·",·Rd_tag·=·"TEXT"),·structure(list(738 ····structure("onfidence·",·Rd_tag·=·"TEXT"),·structure(list(
739 ········structure("i",·Rd_tag·=·"TEXT")),·Rd_tag·=·"\\bold"),·739 ········structure("i",·Rd_tag·=·"TEXT")),·Rd_tag·=·"\\bold"),·
740 ····structure("ntervals·for·survival·curves.",·Rd_tag·=·"TEXT")),·Rd_tag·=·"\\title"),·740 ····structure("ntervals·for·survival·curves.",·Rd_tag·=·"TEXT")),·Rd_tag·=·"\\title"),·
741 ····structure(list(structure("ci",·Rd_tag·=·"VERB")),·Rd_tag·=·"\\name"),·741 ····structure(list(structure("ci",·Rd_tag·=·"VERB")),·Rd_tag·=·"\\name"),·
Offset 1087, 15 lines modifiedOffset 1087, 15 lines modified
1087 ········structure("lapply(list(\"lin\",·\"log\",·\"asi\"),\n",·Rd_tag·=·"RCODE"),·1087 ········structure("lapply(list(\"lin\",·\"log\",·\"asi\"),\n",·Rd_tag·=·"RCODE"),·
1088 ········structure("·······function(x)·ci(t1,·how=\"hall\",·trans=x,·tL=100,·tU=600))\n",·Rd_tag·=·"RCODE"),·1088 ········structure("·······function(x)·ci(t1,·how=\"hall\",·trans=x,·tL=100,·tU=600))\n",·Rd_tag·=·"RCODE"),·
1089 ········structure("t1·<-·ten(Surv(t2,·d3)·~·group,·data=bmt)\n",·Rd_tag·=·"RCODE"),·1089 ········structure("t1·<-·ten(Surv(t2,·d3)·~·group,·data=bmt)\n",·Rd_tag·=·"RCODE"),·
1090 ········structure("ci(t1,·CI=\"0.95\",·how=\"nair\",·trans=\"lin\",·tL=100,·tU=600)\n",·Rd_tag·=·"RCODE"),·1090 ········structure("ci(t1,·CI=\"0.95\",·how=\"nair\",·trans=\"lin\",·tL=100,·tU=600)\n",·Rd_tag·=·"RCODE"),·
1091 ········structure("\n",·Rd_tag·=·"RCODE"),·structure("##·stratified·model\n",·Rd_tag·=·"RCODE"),·1091 ········structure("\n",·Rd_tag·=·"RCODE"),·structure("##·stratified·model\n",·Rd_tag·=·"RCODE"),·
1092 ········structure("data(\"pbc\",·package=\"survival\")\n",·Rd_tag·=·"RCODE"),·1092 ········structure("data(\"pbc\",·package=\"survival\")\n",·Rd_tag·=·"RCODE"),·
1093 ········structure("t1·<-·ten(coxph(Surv(time,·status==2)·~·log(bili)·+·age·+·strata(edema),·data=pbc))\n",·Rd_tag·=·"RCODE"),·1093 ········structure("t1·<-·ten(coxph(Surv(time,·status==2)·~·log(bili)·+·age·+·strata(edema),·data=pbc))\n",·Rd_tag·=·"RCODE"),·
1094 ········structure("ci(t1)\n",·Rd_tag·=·"RCODE"),·structure("\n",·Rd_tag·=·"RCODE")),·Rd_tag·=·"\\examples")),·Rdfile·=·"/build/1st/r-cran-survmisc-0.5.5/man/ci.Rd",·class·=·"Rd",·meta·=·list(1094 ········structure("ci(t1)\n",·Rd_tag·=·"RCODE"),·structure("\n",·Rd_tag·=·"RCODE")),·Rd_tag·=·"\\examples")),·Rdfile·=·"/build/2/r-cran-survmisc-0.5.5/2nd/man/ci.Rd",·class·=·"Rd",·meta·=·list(
1095 ····docType·=·character(0)),·prepared·=·3L)1095 ····docType·=·character(0)),·prepared·=·3L)
  
1096 comp·(list)·=·structure(list(structure(list(structure("compare·survival·curves",·Rd_tag·=·"TEXT")),·Rd_tag·=·"\\title"),·1096 comp·(list)·=·structure(list(structure(list(structure("compare·survival·curves",·Rd_tag·=·"TEXT")),·Rd_tag·=·"\\title"),·
1097 ····structure(list(structure("comp",·Rd_tag·=·"VERB")),·Rd_tag·=·"\\name"),·1097 ····structure(list(structure("comp",·Rd_tag·=·"VERB")),·Rd_tag·=·"\\name"),·
1098 ····structure(list(structure("comp",·Rd_tag·=·"VERB")),·Rd_tag·=·"\\alias"),·1098 ····structure(list(structure("comp",·Rd_tag·=·"VERB")),·Rd_tag·=·"\\alias"),·
1099 ····structure(list(structure("comp.ten",·Rd_tag·=·"VERB")),·Rd_tag·=·"\\alias"),·1099 ····structure(list(structure("comp.ten",·Rd_tag·=·"VERB")),·Rd_tag·=·"\\alias"),·
1100 ····structure(list(structure("\n",·Rd_tag·=·"TEXT"),·structure("compare·survival·curves\n",·Rd_tag·=·"TEXT")),·Rd_tag·=·"\\description"),·1100 ····structure(list(structure("\n",·Rd_tag·=·"TEXT"),·structure("compare·survival·curves\n",·Rd_tag·=·"TEXT")),·Rd_tag·=·"\\description"),·
Offset 1509, 15 lines modifiedOffset 1509, 15 lines modified
1509 ········structure("data(\"larynx\",·package=\"KMsurv\")\n",·Rd_tag·=·"RCODE"),·1509 ········structure("data(\"larynx\",·package=\"KMsurv\")\n",·Rd_tag·=·"RCODE"),·
1510 ········structure("l1·<-·ten(Surv(time,·delta)·~·stage,·data=larynx)\n",·Rd_tag·=·"RCODE"),·1510 ········structure("l1·<-·ten(Surv(time,·delta)·~·stage,·data=larynx)\n",·Rd_tag·=·"RCODE"),·
1511 ········structure("comp(l1)\n",·Rd_tag·=·"RCODE"),·structure("attr(l1,·\"tft\")\n",·Rd_tag·=·"RCODE"),·1511 ········structure("comp(l1)\n",·Rd_tag·=·"RCODE"),·structure("attr(l1,·\"tft\")\n",·Rd_tag·=·"RCODE"),·
1512 ········structure("###·see·effect·of·F-H·test\n",·Rd_tag·=·"RCODE"),·1512 ········structure("###·see·effect·of·F-H·test\n",·Rd_tag·=·"RCODE"),·
1513 ········structure("data(\"alloauto\",·package=\"KMsurv\")\n",·Rd_tag·=·"RCODE"),·1513 ········structure("data(\"alloauto\",·package=\"KMsurv\")\n",·Rd_tag·=·"RCODE"),·
1514 ········structure("a1·<-·ten(Surv(time,·delta)·~·type,·data=alloauto)\n",·Rd_tag·=·"RCODE"),·1514 ········structure("a1·<-·ten(Surv(time,·delta)·~·type,·data=alloauto)\n",·Rd_tag·=·"RCODE"),·
1515 ········structure("comp(a1,·p=c(0,·1),·q=c(1,·1))\n",·Rd_tag·=·"RCODE"),·1515 ········structure("comp(a1,·p=c(0,·1),·q=c(1,·1))\n",·Rd_tag·=·"RCODE"),·
1516 ········structure("\n",·Rd_tag·=·"RCODE")),·Rd_tag·=·"\\examples")),·Rdfile·=·"/build/1st/r-cran-survmisc-0.5.5/man/comp.Rd",·class·=·"Rd",·meta·=·list(1516 ········structure("\n",·Rd_tag·=·"RCODE")),·Rd_tag·=·"\\examples")),·Rdfile·=·"/build/2/r-cran-survmisc-0.5.5/2nd/man/comp.Rd",·class·=·"Rd",·meta·=·list(
1517 ····docType·=·character(0)),·prepared·=·3L)1517 ····docType·=·character(0)),·prepared·=·3L)
  
1518 cutp·(list)·=·structure(list(structure(list(structure(list(structure("cut·p",·Rd_tag·=·"TEXT")),·Rd_tag·=·"\\bold"),·1518 cutp·(list)·=·structure(list(structure(list(structure(list(structure("cut·p",·Rd_tag·=·"TEXT")),·Rd_tag·=·"\\bold"),·
1519 ····structure("oint·for·a·continuous·variable·in·a\n",·Rd_tag·=·"TEXT"),·1519 ····structure("oint·for·a·continuous·variable·in·a\n",·Rd_tag·=·"TEXT"),·
1520 ····structure("model·fit·with·",·Rd_tag·=·"TEXT"),·structure(list(1520 ····structure("model·fit·with·",·Rd_tag·=·"TEXT"),·structure(list(
1521 ········structure("coxph",·Rd_tag·=·"RCODE")),·Rd_tag·=·"\\code"),·1521 ········structure("coxph",·Rd_tag·=·"RCODE")),·Rd_tag·=·"\\code"),·
1522 ····structure("·or·",·Rd_tag·=·"TEXT"),·structure(list(structure("survfit",·Rd_tag·=·"RCODE")),·Rd_tag·=·"\\code"),·1522 ····structure("·or·",·Rd_tag·=·"TEXT"),·structure(list(structure("survfit",·Rd_tag·=·"RCODE")),·Rd_tag·=·"\\code"),·
Offset 1697, 15 lines modifiedOffset 1697, 15 lines modified
1697 ············structure("##·check·significance·of·computed·value\n",·Rd_tag·=·"VERB"),·1697 ············structure("##·check·significance·of·computed·value\n",·Rd_tag·=·"VERB"),·
1698 ············structure("summary(coxph(Surv(time,·delta)·~·age·>=·58,·data=k2))\n",·Rd_tag·=·"VERB"),·1698 ············structure("summary(coxph(Surv(time,·delta)·~·age·>=·58,·data=k2))\n",·Rd_tag·=·"VERB"),·
1699 ············structure("k3·<-·k1[k1$gender==2·&·k1$race==2,·]\n",·Rd_tag·=·"VERB"),·1699 ············structure("k3·<-·k1[k1$gender==2·&·k1$race==2,·]\n",·Rd_tag·=·"VERB"),·
1700 ············structure("c3·<-·coxph(Surv(time,·delta)·~·age,·data=k3)\n",·Rd_tag·=·"VERB"),·1700 ············structure("c3·<-·coxph(Surv(time,·delta)·~·age,·data=k3)\n",·Rd_tag·=·"VERB"),·
1701 ············structure("print(cutp(c3))\n",·Rd_tag·=·"VERB"),·1701 ············structure("print(cutp(c3))\n",·Rd_tag·=·"VERB"),·
1702 ············structure("##·doesn't·apply·to·binary·variables·e.g.·gender\n",·Rd_tag·=·"VERB"),·1702 ············structure("##·doesn't·apply·to·binary·variables·e.g.·gender\n",·Rd_tag·=·"VERB"),·
1703 ············structure("print(cutp(coxph(Surv(time,·delta)·~·age·+·gender,·data=k1)))\n",·Rd_tag·=·"VERB")),·Rd_tag·=·"\\dontrun"),·1703 ············structure("print(cutp(coxph(Surv(time,·delta)·~·age·+·gender,·data=k1)))\n",·Rd_tag·=·"VERB")),·Rd_tag·=·"\\dontrun"),·
1704 ········structure("\n",·Rd_tag·=·"RCODE"),·structure("\n",·Rd_tag·=·"RCODE")),·Rd_tag·=·"\\examples")),·Rdfile·=·"/build/1st/r-cran-survmisc-0.5.5/man/cutp.Rd",·class·=·"Rd",·meta·=·list(1704 ········structure("\n",·Rd_tag·=·"RCODE"),·structure("\n",·Rd_tag·=·"RCODE")),·Rd_tag·=·"\\examples")),·Rdfile·=·"/build/2/r-cran-survmisc-0.5.5/2nd/man/cutp.Rd",·class·=·"Rd",·meta·=·list(
1705 ····docType·=·character(0)),·prepared·=·3L)1705 ····docType·=·character(0)),·prepared·=·3L)
  
1706 gastric·(list)·=·structure(list(structure(list(structure("gastric·cancer·trial·data",·Rd_tag·=·"TEXT")),·Rd_tag·=·"\\title"),·1706 gastric·(list)·=·structure(list(structure(list(structure("gastric·cancer·trial·data",·Rd_tag·=·"TEXT")),·Rd_tag·=·"\\title"),·
1707 ····structure(list(structure("gastric",·Rd_tag·=·"VERB")),·Rd_tag·=·"\\name"),·1707 ····structure(list(structure("gastric",·Rd_tag·=·"VERB")),·Rd_tag·=·"\\name"),·
1708 ····structure(list(structure("gastric",·Rd_tag·=·"VERB")),·Rd_tag·=·"\\alias"),·1708 ····structure(list(structure("gastric",·Rd_tag·=·"VERB")),·Rd_tag·=·"\\alias"),·
1709 ····structure(list(structure("\n",·Rd_tag·=·"TEXT"),·structure("gastric·cancer·trial·data\n",·Rd_tag·=·"TEXT")),·Rd_tag·=·"\\description"),·1709 ····structure(list(structure("\n",·Rd_tag·=·"TEXT"),·structure("gastric·cancer·trial·data\n",·Rd_tag·=·"TEXT")),·Rd_tag·=·"\\description"),·
1710 ····structure(list(structure("A·",·Rd_tag·=·"TEXT"),·structure(list(1710 ····structure(list(structure("A·",·Rd_tag·=·"TEXT"),·structure(list(
Offset 1760, 15 lines modifiedOffset 1760, 15 lines modified
1760 ········structure("(3):643-52.·",·Rd_tag·=·"TEXT"),·structure(list(),·Rd_tag·=·"\\cr"),·1760 ········structure("(3):643-52.·",·Rd_tag·=·"TEXT"),·structure(list(),·Rd_tag·=·"\\cr"),·
1761 ········structure("\n",·Rd_tag·=·"TEXT"),·structure(list(structure("dx.doi.org/10.2307/2531284",·Rd_tag·=·"VERB")),·Rd_tag·=·"\\samp"),·1761 ········structure("\n",·Rd_tag·=·"TEXT"),·structure(list(structure("dx.doi.org/10.2307/2531284",·Rd_tag·=·"VERB")),·Rd_tag·=·"\\samp"),·
1762 ········structure("·JSTOR\n",·Rd_tag·=·"TEXT")),·Rd_tag·=·"\\references"),·1762 ········structure("·JSTOR\n",·Rd_tag·=·"TEXT")),·Rd_tag·=·"\\references"),·
1763 ····structure(list(structure("\n",·Rd_tag·=·"TEXT"),·structure("Examples·in·",·Rd_tag·=·"TEXT"),·1763 ····structure(list(structure("\n",·Rd_tag·=·"TEXT"),·structure("Examples·in·",·Rd_tag·=·"TEXT"),·
1764 ········structure(list(structure(list(structure("comp",·Rd_tag·=·"TEXT")),·Rd_tag·=·"\\link")),·Rd_tag·=·"\\code"),·1764 ········structure(list(structure(list(structure("comp",·Rd_tag·=·"TEXT")),·Rd_tag·=·"\\link")),·Rd_tag·=·"\\code"),·
1765 ········structure("\n",·Rd_tag·=·"TEXT")),·Rd_tag·=·"\\seealso"),·1765 ········structure("\n",·Rd_tag·=·"TEXT")),·Rd_tag·=·"\\seealso"),·
1766 ····structure(list(structure("\n",·Rd_tag·=·"RCODE"),·structure("data(\"gastric\",·package=\"survMisc\",·verbose=TRUE)\n",·Rd_tag·=·"RCODE"),·1766 ····structure(list(structure("\n",·Rd_tag·=·"RCODE"),·structure("data(\"gastric\",·package=\"survMisc\",·verbose=TRUE)\n",·Rd_tag·=·"RCODE"),·
1767 ········structure("head(gastric)\n",·Rd_tag·=·"RCODE"),·structure("\n",·Rd_tag·=·"RCODE")),·Rd_tag·=·"\\examples")),·Rdfile·=·"/build/1st/r-cran-survmisc-0.5.5/man/gastric.Rd",·class·=·"Rd",·meta·=·list(1767 ········structure("head(gastric)\n",·Rd_tag·=·"RCODE"),·structure("\n",·Rd_tag·=·"RCODE")),·Rd_tag·=·"\\examples")),·Rdfile·=·"/build/2/r-cran-survmisc-0.5.5/2nd/man/gastric.Rd",·class·=·"Rd",·meta·=·list(
1768 ····docType·=·"data"),·prepared·=·3L)1768 ····docType·=·"data"),·prepared·=·3L)
  
1769 gof·(list)·=·structure(list(structure(list(structure(list(structure("g",·Rd_tag·=·"TEXT")),·Rd_tag·=·"\\bold"),·1769 gof·(list)·=·structure(list(structure(list(structure(list(structure("g",·Rd_tag·=·"TEXT")),·Rd_tag·=·"\\bold"),·
1770 ····structure("oodness·",·Rd_tag·=·"TEXT"),·structure(list(structure("o",·Rd_tag·=·"TEXT")),·Rd_tag·=·"\\bold"),·1770 ····structure("oodness·",·Rd_tag·=·"TEXT"),·structure(list(structure("o",·Rd_tag·=·"TEXT")),·Rd_tag·=·"\\bold"),·
1771 ····structure("f·",·Rd_tag·=·"TEXT"),·structure(list(structure("f",·Rd_tag·=·"TEXT")),·Rd_tag·=·"\\bold"),·1771 ····structure("f·",·Rd_tag·=·"TEXT"),·structure(list(structure("f",·Rd_tag·=·"TEXT")),·Rd_tag·=·"\\bold"),·
1772 ····structure("it·test·for·a·",·Rd_tag·=·"TEXT"),·structure(list(1772 ····structure("it·test·for·a·",·Rd_tag·=·"TEXT"),·structure(list(
1773 ········structure("coxph",·Rd_tag·=·"RCODE")),·Rd_tag·=·"\\code"),·1773 ········structure("coxph",·Rd_tag·=·"RCODE")),·Rd_tag·=·"\\code"),·
Max diff block lines reached; 14500/27092 bytes (53.52%) of diff not shown.
2.31 KB
./usr/lib/R/site-library/survMisc/help/survMisc.rdx
2.21 KB
survMisc.rdx-content
2.17 KB
Rscript --vanilla -e 'args <- commandArgs(TRUE); readRDS(args[1])' {}
    
Offset 1, 115 lines modifiedOffset 1, 115 lines modified
1 $variables1 $variables
2 $variables$COV2 $variables$COV
3 [1]··287·54223 [1]··288·5424
  
4 $variables$asWide4 $variables$asWide
5 [1]·5997·23425 [1]·6001·2344
  
6 $variables$autoplotTAP6 $variables$autoplotTAP
7 [1]·8632·23377 [1]·8639·2337
  
8 $variables$autoplotTen8 $variables$autoplotTen
9 [1]·11261·110429 [1]·11269·11044
  
10 $variables$ci10 $variables$ci
11 [1]·22587·1039611 [1]·22598·10398
  
12 $variables$comp12 $variables$comp
13 [1]·33269·1227013 [1]·33282·12272
  
14 $variables$cutp14 $variables$cutp
15 [1]·45826··606315 [1]·45842··6065
  
16 $variables$gastric16 $variables$gastric
17 [1]·52176··238717 [1]·52196··2389
  
18 $variables$gof18 $variables$gof
19 [1]·54850··695919 [1]·54872··6961
  
20 $variables$nc20 $variables$nc
21 [1]·62095··210821 [1]·62120··2110
  
22 $variables$predict22 $variables$predict
23 [1]·64491··311123 [1]·64520··3113
  
24 $variables$print24 $variables$print
25 [1]·67889··533025 [1]·67921··5332
  
26 $variables$profLik26 $variables$profLik
27 [1]·73509··274427 [1]·73545··2746
  
28 $variables$rsq28 $variables$rsq
29 [1]·76537··380229 [1]·76576··3804
  
30 $variables$sf30 $variables$sf
31 [1]·80625··589331 [1]·80667··5895
  
32 $variables$survMisc_package32 $variables$survMisc_package
33 [1]·86813··306333 [1]·86860··3065
  
34 $variables$ten34 $variables$ten
35 [1]·90162··960735 [1]·90212··9608
  
36 $variables$xtable36 $variables$xtable
37 [1]·100058···219437 [1]·100110···2197
  
  
38 $references38 $references
39 $references$`env::1`39 $references$`env::1`
40 [1]···0·28740 [1]···0·288
  
41 $references$`env::10`41 $references$`env::10`
42 [1]·61809···28642 [1]·61833···287
  
43 $references$`env::11`43 $references$`env::11`
44 [1]·64203···28844 [1]·64230···290
  
45 $references$`env::12`45 $references$`env::12`
46 [1]·67602···28746 [1]·67633···288
  
47 $references$`env::13`47 $references$`env::13`
48 [1]·73219···29048 [1]·73253···292
  
49 $references$`env::14`49 $references$`env::14`
50 [1]·76253···28450 [1]·76291···285
  
51 $references$`env::15`51 $references$`env::15`
52 [1]·80339···28652 [1]·80380···287
  
53 $references$`env::16`53 $references$`env::16`
54 [1]·86518···29554 [1]·86562···298
  
55 $references$`env::17`55 $references$`env::17`
56 [1]·89876···28656 [1]·89925···287
  
57 $references$`env::18`57 $references$`env::18`
58 [1]·99769···28958 [1]·99820···290
  
59 $references$`env::2`59 $references$`env::2`
60 [1]·5709··28860 [1]·5712··289
  
61 $references$`env::3`61 $references$`env::3`
62 [1]·8339··29362 [1]·8345··294
  
63 $references$`env::4`63 $references$`env::4`
64 [1]·10969···29264 [1]·10976···293
  
65 $references$`env::5`65 $references$`env::5`
66 [1]·22303···28466 [1]·22313···285
  
67 $references$`env::6`67 $references$`env::6`
68 [1]·32983···28668 [1]·32996···286
  
69 $references$`env::7`69 $references$`env::7`
70 [1]·45539···28770 [1]·45554···288
  
71 $references$`env::8`71 $references$`env::8`
72 [1]·51889···28772 [1]·51907···289
  
73 $references$`env::9`73 $references$`env::9`
74 [1]·54563···28774 [1]·54585···287
  
  
75 $compressed75 $compressed
76 [1]·TRUE76 [1]·TRUE