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Rscript --vanilla - {}
    
Offset 41, 15 lines modifiedOffset 41, 15 lines modified
41 ········structure("······##··(highlight·all·groups·with·*either*·extreme·intercept·*or*\n",·Rd_tag·=·"RCODE"),·41 ········structure("······##··(highlight·all·groups·with·*either*·extreme·intercept·*or*\n",·Rd_tag·=·"RCODE"),·
42 ········structure("······##···extreme·slope)\n",·Rd_tag·=·"RCODE"),·42 ········structure("······##···extreme·slope)\n",·Rd_tag·=·"RCODE"),·
43 ········structure("······ggplot(aa3,·aes(estimate,level,xmin=lb,xmax=ub,colour=factor(keep)))+\n",·Rd_tag·=·"RCODE"),·43 ········structure("······ggplot(aa3,·aes(estimate,level,xmin=lb,xmax=ub,colour=factor(keep)))+\n",·Rd_tag·=·"RCODE"),·
44 ········structure("·········geom_errorbarh(height=0)+\n",·Rd_tag·=·"RCODE"),·44 ········structure("·········geom_errorbarh(height=0)+\n",·Rd_tag·=·"RCODE"),·
45 ········structure("·········geom_vline(xintercept=0,lty=2)+\n",·Rd_tag·=·"RCODE"),·45 ········structure("·········geom_vline(xintercept=0,lty=2)+\n",·Rd_tag·=·"RCODE"),·
46 ········structure("·········geom_point()+facet_wrap(~variable,scale=\"free_x\")+\n",·Rd_tag·=·"RCODE"),·46 ········structure("·········geom_point()+facet_wrap(~variable,scale=\"free_x\")+\n",·Rd_tag·=·"RCODE"),·
47 ········structure("·········scale_colour_manual(values=c(\"black\",\"red\"),·guide=FALSE)\n",·Rd_tag·=·"RCODE"),·47 ········structure("·········scale_colour_manual(values=c(\"black\",\"red\"),·guide=FALSE)\n",·Rd_tag·=·"RCODE"),·
48 ········structure("···}\n",·Rd_tag·=·"RCODE"),·structure("}\n",·Rd_tag·=·"RCODE")),·Rd_tag·=·"\\examples")),·Rdfile·=·"/build/1st/r-cran-broom.mixed-0.2.6/man/augment.ranef.mer.Rd",·class·=·"Rd",·meta·=·list(48 ········structure("···}\n",·Rd_tag·=·"RCODE"),·structure("}\n",·Rd_tag·=·"RCODE")),·Rd_tag·=·"\\examples")),·Rdfile·=·"/build/2/r-cran-broom.mixed-0.2.6/2nd/man/augment.ranef.mer.Rd",·class·=·"Rd",·meta·=·list(
49 ····docType·=·character(0)),·prepared·=·3L)49 ····docType·=·character(0)),·prepared·=·3L)
  
50 brms_tidiers·(list)·=·structure(list(structure(list(structure("Tidying·methods·for·a·brms·model",·Rd_tag·=·"TEXT")),·Rd_tag·=·"\\title"),·50 brms_tidiers·(list)·=·structure(list(structure(list(structure("Tidying·methods·for·a·brms·model",·Rd_tag·=·"TEXT")),·Rd_tag·=·"\\title"),·
51 ····structure(list(structure("brms_tidiers",·Rd_tag·=·"VERB")),·Rd_tag·=·"\\name"),·51 ····structure(list(structure("brms_tidiers",·Rd_tag·=·"VERB")),·Rd_tag·=·"\\name"),·
52 ····structure(list(structure("brms_tidiers",·Rd_tag·=·"VERB")),·Rd_tag·=·"\\alias"),·52 ····structure(list(structure("brms_tidiers",·Rd_tag·=·"VERB")),·Rd_tag·=·"\\alias"),·
53 ····structure(list(structure("tidy.brmsfit",·Rd_tag·=·"VERB")),·Rd_tag·=·"\\alias"),·53 ····structure(list(structure("tidy.brmsfit",·Rd_tag·=·"VERB")),·Rd_tag·=·"\\alias"),·
54 ····structure(list(structure("glance.brmsfit",·Rd_tag·=·"VERB")),·Rd_tag·=·"\\alias"),·54 ····structure(list(structure("glance.brmsfit",·Rd_tag·=·"VERB")),·Rd_tag·=·"\\alias"),·
Offset 230, 25 lines modifiedOffset 230, 25 lines modified
230 ········structure("···tidy(fit,·effects·=·\"ran_pars\",·robust·=·TRUE)\n",·Rd_tag·=·"RCODE"),·230 ········structure("···tidy(fit,·effects·=·\"ran_pars\",·robust·=·TRUE)\n",·Rd_tag·=·"RCODE"),·
231 ········structure("···#·glance·method\n",·Rd_tag·=·"RCODE"),·231 ········structure("···#·glance·method\n",·Rd_tag·=·"RCODE"),·
232 ········structure("···glance(fit)\n",·Rd_tag·=·"RCODE"),·structure("···##·this·example·will·give·a·warning·that·it·should·be·run·with\n",·Rd_tag·=·"RCODE"),·232 ········structure("···glance(fit)\n",·Rd_tag·=·"RCODE"),·structure("···##·this·example·will·give·a·warning·that·it·should·be·run·with\n",·Rd_tag·=·"RCODE"),·
233 ········structure("···##·reloo=TRUE;·however,·doing·this·will·fail\n",·Rd_tag·=·"RCODE"),·233 ········structure("···##·reloo=TRUE;·however,·doing·this·will·fail\n",·Rd_tag·=·"RCODE"),·
234 ········structure("···##·because·the·\\code{fit}·object·has·been·stripped·down·to·save·space\n",·Rd_tag·=·"RCODE"),·234 ········structure("···##·because·the·\\code{fit}·object·has·been·stripped·down·to·save·space\n",·Rd_tag·=·"RCODE"),·
235 ········structure("···suppressWarnings(glance(fit,·looic·=·TRUE,·cores·=·1))\n",·Rd_tag·=·"RCODE"),·235 ········structure("···suppressWarnings(glance(fit,·looic·=·TRUE,·cores·=·1))\n",·Rd_tag·=·"RCODE"),·
236 ········structure("···head(augment(fit))\n",·Rd_tag·=·"RCODE"),·236 ········structure("···head(augment(fit))\n",·Rd_tag·=·"RCODE"),·
237 ········structure("}\n",·Rd_tag·=·"RCODE"),·structure("\n",·Rd_tag·=·"RCODE")),·Rd_tag·=·"\\examples")),·Rdfile·=·"/build/1st/r-cran-broom.mixed-0.2.6/man/brms_tidiers.Rd",·class·=·"Rd",·meta·=·list(237 ········structure("}\n",·Rd_tag·=·"RCODE"),·structure("\n",·Rd_tag·=·"RCODE")),·Rd_tag·=·"\\examples")),·Rdfile·=·"/build/2/r-cran-broom.mixed-0.2.6/2nd/man/brms_tidiers.Rd",·class·=·"Rd",·meta·=·list(
238 ····docType·=·character(0)),·prepared·=·3L)238 ····docType·=·character(0)),·prepared·=·3L)
  
239 compact·(list)·=·structure(list(structure(list(structure("Remove·NULL·items·in·a·vector·or·list",·Rd_tag·=·"TEXT")),·Rd_tag·=·"\\title"),·239 compact·(list)·=·structure(list(structure(list(structure("Remove·NULL·items·in·a·vector·or·list",·Rd_tag·=·"TEXT")),·Rd_tag·=·"\\title"),·
240 ····structure(list(structure("compact",·Rd_tag·=·"VERB")),·Rd_tag·=·"\\name"),·240 ····structure(list(structure("compact",·Rd_tag·=·"VERB")),·Rd_tag·=·"\\name"),·
241 ····structure(list(structure("compact",·Rd_tag·=·"VERB")),·Rd_tag·=·"\\alias"),·241 ····structure(list(structure("compact",·Rd_tag·=·"VERB")),·Rd_tag·=·"\\alias"),·
242 ····structure(list(structure("\n",·Rd_tag·=·"TEXT"),·structure("Remove·NULL·items·in·a·vector·or·list\n",·Rd_tag·=·"TEXT")),·Rd_tag·=·"\\description"),·242 ····structure(list(structure("\n",·Rd_tag·=·"TEXT"),·structure("Remove·NULL·items·in·a·vector·or·list\n",·Rd_tag·=·"TEXT")),·Rd_tag·=·"\\description"),·
243 ····structure(list(structure("\n",·Rd_tag·=·"RCODE"),·structure("compact(x)\n",·Rd_tag·=·"RCODE")),·Rd_tag·=·"\\usage"),·243 ····structure(list(structure("\n",·Rd_tag·=·"RCODE"),·structure("compact(x)\n",·Rd_tag·=·"RCODE")),·Rd_tag·=·"\\usage"),·
244 ····structure(list(structure("\n",·Rd_tag·=·"TEXT"),·structure(list(244 ····structure(list(structure("\n",·Rd_tag·=·"TEXT"),·structure(list(
245 ········list(structure("x",·Rd_tag·=·"TEXT")),·list(structure("a·vector·or·list",·Rd_tag·=·"TEXT"))),·Rd_tag·=·"\\item"),·245 ········list(structure("x",·Rd_tag·=·"TEXT")),·list(structure("a·vector·or·list",·Rd_tag·=·"TEXT"))),·Rd_tag·=·"\\item"),·
246 ········structure("\n",·Rd_tag·=·"TEXT")),·Rd_tag·=·"\\arguments")),·Rdfile·=·"/build/1st/r-cran-broom.mixed-0.2.6/man/compact.Rd",·class·=·"Rd",·meta·=·list(246 ········structure("\n",·Rd_tag·=·"TEXT")),·Rd_tag·=·"\\arguments")),·Rdfile·=·"/build/2/r-cran-broom.mixed-0.2.6/2nd/man/compact.Rd",·class·=·"Rd",·meta·=·list(
247 ····docType·=·character(0)),·prepared·=·3L)247 ····docType·=·character(0)),·prepared·=·3L)
  
248 extractEffects·(list)·=·structure(list(structure(list(structure("Internal·function·to·extract·the·fixed·or·random·effects·from·an·",·Rd_tag·=·"TEXT"),·248 extractEffects·(list)·=·structure(list(structure(list(structure("Internal·function·to·extract·the·fixed·or·random·effects·from·an·",·Rd_tag·=·"TEXT"),·
249 ····structure(list(structure("MCMCglmm",·Rd_tag·=·"RCODE")),·Rd_tag·=·"\\code"),·249 ····structure(list(structure("MCMCglmm",·Rd_tag·=·"RCODE")),·Rd_tag·=·"\\code"),·
250 ····structure("·object",·Rd_tag·=·"TEXT")),·Rd_tag·=·"\\title"),·250 ····structure("·object",·Rd_tag·=·"TEXT")),·Rd_tag·=·"\\title"),·
251 ····structure(list(structure(".extractEffects",·Rd_tag·=·"VERB")),·Rd_tag·=·"\\name"),·251 ····structure(list(structure(".extractEffects",·Rd_tag·=·"VERB")),·Rd_tag·=·"\\name"),·
252 ····structure(list(structure(".extractEffects",·Rd_tag·=·"VERB")),·Rd_tag·=·"\\alias"),·252 ····structure(list(structure(".extractEffects",·Rd_tag·=·"VERB")),·Rd_tag·=·"\\alias"),·
Offset 285, 15 lines modifiedOffset 285, 15 lines modified
285 ············list(structure("Not·currently·used.",·Rd_tag·=·"TEXT"))),·Rd_tag·=·"\\item"),·285 ············list(structure("Not·currently·used.",·Rd_tag·=·"TEXT"))),·Rd_tag·=·"\\item"),·
286 ········structure("\n",·Rd_tag·=·"TEXT")),·Rd_tag·=·"\\arguments"),·286 ········structure("\n",·Rd_tag·=·"TEXT")),·Rd_tag·=·"\\arguments"),·
287 ····structure(list(structure("\n",·Rd_tag·=·"TEXT"),·structure("A·matrix·of·the·posterior·samples·or·means·for·the·fixed·or·random·effects.\n",·Rd_tag·=·"TEXT")),·Rd_tag·=·"\\value"),·287 ····structure(list(structure("\n",·Rd_tag·=·"TEXT"),·structure("A·matrix·of·the·posterior·samples·or·means·for·the·fixed·or·random·effects.\n",·Rd_tag·=·"TEXT")),·Rd_tag·=·"\\value"),·
288 ····structure(list(structure("\n",·Rd_tag·=·"TEXT"),·structure(list(288 ····structure(list(structure("\n",·Rd_tag·=·"TEXT"),·structure(list(
289 ········structure(list(structure("fixef.MCMCglmm",·Rd_tag·=·"TEXT")),·Rd_tag·=·"\\link")),·Rd_tag·=·"\\code"),·289 ········structure(list(structure("fixef.MCMCglmm",·Rd_tag·=·"TEXT")),·Rd_tag·=·"\\link")),·Rd_tag·=·"\\code"),·
290 ········structure(",·",·Rd_tag·=·"TEXT"),·structure(list(structure(list(290 ········structure(",·",·Rd_tag·=·"TEXT"),·structure(list(structure(list(
291 ············structure("ranef.MCMCglmm",·Rd_tag·=·"TEXT")),·Rd_tag·=·"\\link")),·Rd_tag·=·"\\code"),·291 ············structure("ranef.MCMCglmm",·Rd_tag·=·"TEXT")),·Rd_tag·=·"\\link")),·Rd_tag·=·"\\code"),·
292 ········structure("\n",·Rd_tag·=·"TEXT")),·Rd_tag·=·"\\seealso")),·Rdfile·=·"/build/1st/r-cran-broom.mixed-0.2.6/man/extractEffects.Rd",·class·=·"Rd",·meta·=·list(292 ········structure("\n",·Rd_tag·=·"TEXT")),·Rd_tag·=·"\\seealso")),·Rdfile·=·"/build/2/r-cran-broom.mixed-0.2.6/2nd/man/extractEffects.Rd",·class·=·"Rd",·meta·=·list(
293 ····docType·=·character(0)),·prepared·=·3L)293 ····docType·=·character(0)),·prepared·=·3L)
  
294 fixef.MCMCglmm·(list)·=·structure(list(structure(list(structure("Extract·fixed·effects·from·an·",·Rd_tag·=·"TEXT"),·294 fixef.MCMCglmm·(list)·=·structure(list(structure(list(structure("Extract·fixed·effects·from·an·",·Rd_tag·=·"TEXT"),·
295 ····structure(list(structure("MCMCglmm",·Rd_tag·=·"RCODE")),·Rd_tag·=·"\\code"),·295 ····structure(list(structure("MCMCglmm",·Rd_tag·=·"RCODE")),·Rd_tag·=·"\\code"),·
296 ····structure("·object",·Rd_tag·=·"TEXT")),·Rd_tag·=·"\\title"),·296 ····structure("·object",·Rd_tag·=·"TEXT")),·Rd_tag·=·"\\title"),·
297 ····structure(list(structure("fixef.MCMCglmm",·Rd_tag·=·"VERB")),·Rd_tag·=·"\\name"),·297 ····structure(list(structure("fixef.MCMCglmm",·Rd_tag·=·"VERB")),·Rd_tag·=·"\\name"),·
298 ····structure(list(structure("fixef.MCMCglmm",·Rd_tag·=·"VERB")),·Rd_tag·=·"\\alias"),·298 ····structure(list(structure("fixef.MCMCglmm",·Rd_tag·=·"VERB")),·Rd_tag·=·"\\alias"),·
Offset 325, 15 lines modifiedOffset 325, 15 lines modified
325 ········structure("\n",·Rd_tag·=·"VERB"),·structure("··#·a·simple·MCMCglmm·model\n",·Rd_tag·=·"VERB"),·325 ········structure("\n",·Rd_tag·=·"VERB"),·structure("··#·a·simple·MCMCglmm·model\n",·Rd_tag·=·"VERB"),·
326 ········structure("··data(PlodiaPO)\n",·Rd_tag·=·"VERB"),·structure("··m·<-·MCMCglmm(PO·~·1,·random=·~·FSfamily,·data=PlodiaPO,·verbose=FALSE)\n",·Rd_tag·=·"VERB"),·326 ········structure("··data(PlodiaPO)\n",·Rd_tag·=·"VERB"),·structure("··m·<-·MCMCglmm(PO·~·1,·random=·~·FSfamily,·data=PlodiaPO,·verbose=FALSE)\n",·Rd_tag·=·"VERB"),·
327 ········structure("\n",·Rd_tag·=·"VERB"),·structure("··#·only·extract·average·fixed·effects\n",·Rd_tag·=·"VERB"),·327 ········structure("\n",·Rd_tag·=·"VERB"),·structure("··#·only·extract·average·fixed·effects\n",·Rd_tag·=·"VERB"),·
328 ········structure("··fixef(m,·use·=·\"mean\")\n",·Rd_tag·=·"VERB"),·328 ········structure("··fixef(m,·use·=·\"mean\")\n",·Rd_tag·=·"VERB"),·
329 ········structure("\n",·Rd_tag·=·"VERB"),·structure("··#·histogram·of·posterior·samples·of·fixed·effects\n",·Rd_tag·=·"VERB"),·329 ········structure("\n",·Rd_tag·=·"VERB"),·structure("··#·histogram·of·posterior·samples·of·fixed·effects\n",·Rd_tag·=·"VERB"),·
330 ········structure("··hist(fixef(m))\n",·Rd_tag·=·"VERB"),·structure("··#·matches·the·mean\n",·Rd_tag·=·"VERB"),·330 ········structure("··hist(fixef(m))\n",·Rd_tag·=·"VERB"),·structure("··#·matches·the·mean\n",·Rd_tag·=·"VERB"),·
331 ········structure("··rowMeans(fixef(m))\n",·Rd_tag·=·"VERB")),·Rd_tag·=·"\\dontrun"),·331 ········structure("··rowMeans(fixef(m))\n",·Rd_tag·=·"VERB")),·Rd_tag·=·"\\dontrun"),·
332 ········structure("\n",·Rd_tag·=·"RCODE")),·Rd_tag·=·"\\examples")),·Rdfile·=·"/build/1st/r-cran-broom.mixed-0.2.6/man/fixef.MCMCglmm.Rd",·class·=·"Rd",·meta·=·list(332 ········structure("\n",·Rd_tag·=·"RCODE")),·Rd_tag·=·"\\examples")),·Rdfile·=·"/build/2/r-cran-broom.mixed-0.2.6/2nd/man/fixef.MCMCglmm.Rd",·class·=·"Rd",·meta·=·list(
333 ····docType·=·character(0)),·prepared·=·3L)333 ····docType·=·character(0)),·prepared·=·3L)
  
334 gamlss_tidiers·(list)·=·structure(list(structure(list(structure("Tidying·methods·for·gamlss·objects",·Rd_tag·=·"TEXT")),·Rd_tag·=·"\\title"),·334 gamlss_tidiers·(list)·=·structure(list(structure(list(structure("Tidying·methods·for·gamlss·objects",·Rd_tag·=·"TEXT")),·Rd_tag·=·"\\title"),·
335 ····structure(list(structure("gamlss_tidiers",·Rd_tag·=·"VERB")),·Rd_tag·=·"\\name"),·335 ····structure(list(structure("gamlss_tidiers",·Rd_tag·=·"VERB")),·Rd_tag·=·"\\name"),·
336 ····structure(list(structure("gamlss_tidiers",·Rd_tag·=·"VERB")),·Rd_tag·=·"\\alias"),·336 ····structure(list(structure("gamlss_tidiers",·Rd_tag·=·"VERB")),·Rd_tag·=·"\\alias"),·
337 ····structure(list(structure("tidy.gamlss",·Rd_tag·=·"VERB")),·Rd_tag·=·"\\alias"),·337 ····structure(list(structure("tidy.gamlss",·Rd_tag·=·"VERB")),·Rd_tag·=·"\\alias"),·
338 ····structure(list(structure("\n",·Rd_tag·=·"TEXT"),·structure("Tidying·methods·for·\"gamlss\"·objects·from·the·gamlss·package.\n",·Rd_tag·=·"TEXT")),·Rd_tag·=·"\\description"),·338 ····structure(list(structure("\n",·Rd_tag·=·"TEXT"),·structure("Tidying·methods·for·\"gamlss\"·objects·from·the·gamlss·package.\n",·Rd_tag·=·"TEXT")),·Rd_tag·=·"\\description"),·
Offset 391, 15 lines modifiedOffset 391, 15 lines modified
391 ············structure("·········mod·<-·gamlss(y~pb(x),·sigma.fo=~pb(x),·family=BCT,\n",·Rd_tag·=·"VERB"),·391 ············structure("·········mod·<-·gamlss(y~pb(x),·sigma.fo=~pb(x),·family=BCT,\n",·Rd_tag·=·"VERB"),·
392 ············structure("·······················data=abdom,·method=mixed(1,20))\n",·Rd_tag·=·"VERB"),·392 ············structure("·······················data=abdom,·method=mixed(1,20))\n",·Rd_tag·=·"VERB"),·
393 ············structure("····",·Rd_tag·=·"VERB")),·Rd_tag·=·"\\dontrun"),·393 ············structure("····",·Rd_tag·=·"VERB")),·Rd_tag·=·"\\dontrun"),·
394 ········structure("\n",·Rd_tag·=·"RCODE"),·structure("····##·load·stored·object\n",·Rd_tag·=·"RCODE"),·394 ········structure("\n",·Rd_tag·=·"RCODE"),·structure("····##·load·stored·object\n",·Rd_tag·=·"RCODE"),·
395 ········structure("····mod·<-·readRDS(system.file(\"extdata\",·\"gamlss_example.rds\",\n",·Rd_tag·=·"RCODE"),·395 ········structure("····mod·<-·readRDS(system.file(\"extdata\",·\"gamlss_example.rds\",\n",·Rd_tag·=·"RCODE"),·
396 ········structure("···················package=\"broom.mixed\"))\n",·Rd_tag·=·"RCODE"),·396 ········structure("···················package=\"broom.mixed\"))\n",·Rd_tag·=·"RCODE"),·
397 ········structure("····tidy(mod)\n",·Rd_tag·=·"RCODE"),·structure("}\n",·Rd_tag·=·"RCODE"),·397 ········structure("····tidy(mod)\n",·Rd_tag·=·"RCODE"),·structure("}\n",·Rd_tag·=·"RCODE"),·
398 ········structure("\n",·Rd_tag·=·"RCODE")),·Rd_tag·=·"\\examples")),·Rdfile·=·"/build/1st/r-cran-broom.mixed-0.2.6/man/gamlss_tidiers.Rd",·class·=·"Rd",·meta·=·list(398 ········structure("\n",·Rd_tag·=·"RCODE")),·Rd_tag·=·"\\examples")),·Rdfile·=·"/build/2/r-cran-broom.mixed-0.2.6/2nd/man/gamlss_tidiers.Rd",·class·=·"Rd",·meta·=·list(
399 ····docType·=·character(0)),·prepared·=·3L)399 ····docType·=·character(0)),·prepared·=·3L)
  
400 glmmTMB_tidiers·(list)·=·structure(list(structure(list(structure("Tidying·methods·for·glmmTMB·models",·Rd_tag·=·"TEXT")),·Rd_tag·=·"\\title"),·400 glmmTMB_tidiers·(list)·=·structure(list(structure(list(structure("Tidying·methods·for·glmmTMB·models",·Rd_tag·=·"TEXT")),·Rd_tag·=·"\\title"),·
401 ····structure(list(structure("glmmTMB_tidiers",·Rd_tag·=·"VERB")),·Rd_tag·=·"\\name"),·401 ····structure(list(structure("glmmTMB_tidiers",·Rd_tag·=·"VERB")),·Rd_tag·=·"\\name"),·
402 ····structure(list(structure("glmmTMB_tidiers",·Rd_tag·=·"VERB")),·Rd_tag·=·"\\alias"),·402 ····structure(list(structure("glmmTMB_tidiers",·Rd_tag·=·"VERB")),·Rd_tag·=·"\\alias"),·
403 ····structure(list(structure("tidy.glmmTMB",·Rd_tag·=·"VERB")),·Rd_tag·=·"\\alias"),·403 ····structure(list(structure("tidy.glmmTMB",·Rd_tag·=·"VERB")),·Rd_tag·=·"\\alias"),·
404 ····structure(list(structure("augment.glmmTMB",·Rd_tag·=·"VERB")),·Rd_tag·=·"\\alias"),·404 ····structure(list(structure("augment.glmmTMB",·Rd_tag·=·"VERB")),·Rd_tag·=·"\\alias"),·
Offset 592, 15 lines modifiedOffset 592, 15 lines modified
592 ········structure("····tidy(glmm1,·effects·=·\"fixed\",·exponentiate=TRUE)\n",·Rd_tag·=·"RCODE"),·592 ········structure("····tidy(glmm1,·effects·=·\"fixed\",·exponentiate=TRUE)\n",·Rd_tag·=·"RCODE"),·
593 ········structure("····tidy(glmm1,·effects·=·\"fixed\",·conf.int=TRUE,·exponentiate=TRUE)\n",·Rd_tag·=·"RCODE"),·593 ········structure("····tidy(glmm1,·effects·=·\"fixed\",·conf.int=TRUE,·exponentiate=TRUE)\n",·Rd_tag·=·"RCODE"),·
594 ········structure("····head(augment(glmm1,·cbpp))\n",·Rd_tag·=·"RCODE"),·594 ········structure("····head(augment(glmm1,·cbpp))\n",·Rd_tag·=·"RCODE"),·
595 ········structure("····head(augment(glmm1,·cbpp,·type.residuals=\"pearson\"))\n",·Rd_tag·=·"RCODE"),·595 ········structure("····head(augment(glmm1,·cbpp,·type.residuals=\"pearson\"))\n",·Rd_tag·=·"RCODE"),·
596 ········structure("····glance(glmm1)\n",·Rd_tag·=·"RCODE"),·structure(list(596 ········structure("····glance(glmm1)\n",·Rd_tag·=·"RCODE"),·structure(list(
597 ············structure("\n",·Rd_tag·=·"VERB"),·structure("##·profile·CIs·-·a·little·bit·slower·but·more·accurate\n",·Rd_tag·=·"VERB"),·597 ············structure("\n",·Rd_tag·=·"VERB"),·structure("##·profile·CIs·-·a·little·bit·slower·but·more·accurate\n",·Rd_tag·=·"VERB"),·
598 ············structure("····tidy(glmm1,·effects·=·\"fixed\",·conf.int=TRUE,·exponentiate=TRUE,·conf.method=\"profile\")\n",·Rd_tag·=·"VERB")),·Rd_tag·=·"\\dontrun"),·598 ············structure("····tidy(glmm1,·effects·=·\"fixed\",·conf.int=TRUE,·exponentiate=TRUE,·conf.method=\"profile\")\n",·Rd_tag·=·"VERB")),·Rd_tag·=·"\\dontrun"),·
599 ········structure("\n",·Rd_tag·=·"RCODE"),·structure("}\n",·Rd_tag·=·"RCODE")),·Rd_tag·=·"\\examples")),·Rdfile·=·"/build/1st/r-cran-broom.mixed-0.2.6/man/glmmTMB_tidiers.Rd",·class·=·"Rd",·meta·=·list(599 ········structure("\n",·Rd_tag·=·"RCODE"),·structure("}\n",·Rd_tag·=·"RCODE")),·Rd_tag·=·"\\examples")),·Rdfile·=·"/build/2/r-cran-broom.mixed-0.2.6/2nd/man/glmmTMB_tidiers.Rd",·class·=·"Rd",·meta·=·list(
600 ····docType·=·character(0)),·prepared·=·3L)600 ····docType·=·character(0)),·prepared·=·3L)
  
601 glmmadmb_tidiers·(list)·=·structure(list(structure(list(structure("Tidying·methods·for·glmmADMB·models",·Rd_tag·=·"TEXT")),·Rd_tag·=·"\\title"),·601 glmmadmb_tidiers·(list)·=·structure(list(structure(list(structure("Tidying·methods·for·glmmADMB·models",·Rd_tag·=·"TEXT")),·Rd_tag·=·"\\title"),·
602 ····structure(list(structure("glmmadmb_tidiers",·Rd_tag·=·"VERB")),·Rd_tag·=·"\\name"),·602 ····structure(list(structure("glmmadmb_tidiers",·Rd_tag·=·"VERB")),·Rd_tag·=·"\\name"),·
603 ····structure(list(structure("glmmadmb_tidiers",·Rd_tag·=·"VERB")),·Rd_tag·=·"\\alias"),·603 ····structure(list(structure("glmmadmb_tidiers",·Rd_tag·=·"VERB")),·Rd_tag·=·"\\alias"),·
604 ····structure(list(structure("glmmADMB_tidiers",·Rd_tag·=·"VERB")),·Rd_tag·=·"\\alias"),·604 ····structure(list(structure("glmmADMB_tidiers",·Rd_tag·=·"VERB")),·Rd_tag·=·"\\alias"),·
605 ····structure(list(structure("tidy.glmmadmb",·Rd_tag·=·"VERB")),·Rd_tag·=·"\\alias"),·605 ····structure(list(structure("tidy.glmmadmb",·Rd_tag·=·"VERB")),·Rd_tag·=·"\\alias"),·
Offset 782, 30 lines modifiedOffset 782, 30 lines modified
782 ········structure("····head(augment(lmm1,·sleepstudy))\n",·Rd_tag·=·"RCODE"),·782 ········structure("····head(augment(lmm1,·sleepstudy))\n",·Rd_tag·=·"RCODE"),·
783 ········structure("····glance(lmm1)\n",·Rd_tag·=·"RCODE"),·structure("\n",·Rd_tag·=·"RCODE"),·783 ········structure("····glance(lmm1)\n",·Rd_tag·=·"RCODE"),·structure("\n",·Rd_tag·=·"RCODE"),·
784 ········structure("····glmm1·<-·glmmadmb(cbind(incidence,·size·-·incidence)·~·period·+·(1·|·herd),\n",·Rd_tag·=·"RCODE"),·784 ········structure("····glmm1·<-·glmmadmb(cbind(incidence,·size·-·incidence)·~·period·+·(1·|·herd),\n",·Rd_tag·=·"RCODE"),·
785 ········structure("··················data·=·cbpp,·family·=·\"binomial\")\n",·Rd_tag·=·"RCODE"),·785 ········structure("··················data·=·cbpp,·family·=·\"binomial\")\n",·Rd_tag·=·"RCODE"),·
786 ········structure("····tidy(glmm1)\n",·Rd_tag·=·"RCODE"),·structure("····tidy(glmm1,·effects·=·\"fixed\")\n",·Rd_tag·=·"RCODE"),·786 ········structure("····tidy(glmm1)\n",·Rd_tag·=·"RCODE"),·structure("····tidy(glmm1,·effects·=·\"fixed\")\n",·Rd_tag·=·"RCODE"),·
787 ········structure("····head(augment(glmm1,·cbpp))\n",·Rd_tag·=·"RCODE"),·787 ········structure("····head(augment(glmm1,·cbpp))\n",·Rd_tag·=·"RCODE"),·
788 ········structure("····glance(glmm1)\n",·Rd_tag·=·"RCODE"),·structure("\n",·Rd_tag·=·"RCODE"),·788 ········structure("····glance(glmm1)\n",·Rd_tag·=·"RCODE"),·structure("\n",·Rd_tag·=·"RCODE"),·
789 ········structure("}\n",·Rd_tag·=·"RCODE")),·Rd_tag·=·"\\examples")),·Rdfile·=·"/build/1st/r-cran-broom.mixed-0.2.6/man/glmmadmb_tidiers.Rd",·class·=·"Rd",·meta·=·list(789 ········structure("}\n",·Rd_tag·=·"RCODE")),·Rd_tag·=·"\\examples")),·Rdfile·=·"/build/2/r-cran-broom.mixed-0.2.6/2nd/man/glmmadmb_tidiers.Rd",·class·=·"Rd",·meta·=·list(
790 ····docType·=·character(0)),·prepared·=·3L)790 ····docType·=·character(0)),·prepared·=·3L)
  
791 hideOutput·(NULL)·=·NULL791 hideOutput·(NULL)·=·NULL
  
792 insert_NAs·(list)·=·structure(list(structure(list(structure("insert·a·row·of·NAs·into·a·data·frame·wherever·another·data·frame·has·NAs",·Rd_tag·=·"TEXT")),·Rd_tag·=·"\\title"),·792 insert_NAs·(list)·=·structure(list(structure(list(structure("insert·a·row·of·NAs·into·a·data·frame·wherever·another·data·frame·has·NAs",·Rd_tag·=·"TEXT")),·Rd_tag·=·"\\title"),·
793 ····structure(list(structure("insert_NAs",·Rd_tag·=·"VERB")),·Rd_tag·=·"\\name"),·793 ····structure(list(structure("insert_NAs",·Rd_tag·=·"VERB")),·Rd_tag·=·"\\name"),·
794 ····structure(list(structure("insert_NAs",·Rd_tag·=·"VERB")),·Rd_tag·=·"\\alias"),·794 ····structure(list(structure("insert_NAs",·Rd_tag·=·"VERB")),·Rd_tag·=·"\\alias"),·
795 ····structure(list(structure("\n",·Rd_tag·=·"TEXT"),·structure("insert·a·row·of·NAs·into·a·data·frame·wherever·another·data·frame·has·NAs\n",·Rd_tag·=·"TEXT")),·Rd_tag·=·"\\description"),·795 ····structure(list(structure("\n",·Rd_tag·=·"TEXT"),·structure("insert·a·row·of·NAs·into·a·data·frame·wherever·another·data·frame·has·NAs\n",·Rd_tag·=·"TEXT")),·Rd_tag·=·"\\description"),·
796 ····structure(list(structure("\n",·Rd_tag·=·"RCODE"),·structure("insert_NAs(x,·original)\n",·Rd_tag·=·"RCODE")),·Rd_tag·=·"\\usage"),·796 ····structure(list(structure("\n",·Rd_tag·=·"RCODE"),·structure("insert_NAs(x,·original)\n",·Rd_tag·=·"RCODE")),·Rd_tag·=·"\\usage"),·
797 ····structure(list(structure("\n",·Rd_tag·=·"TEXT"),·structure(list(797 ····structure(list(structure("\n",·Rd_tag·=·"TEXT"),·structure(list(
798 ········list(structure("x",·Rd_tag·=·"TEXT")),·list(structure("data·frame·that·has·one·row·for·each·non-NA·row·in·original",·Rd_tag·=·"TEXT"))),·Rd_tag·=·"\\item"),·798 ········list(structure("x",·Rd_tag·=·"TEXT")),·list(structure("data·frame·that·has·one·row·for·each·non-NA·row·in·original",·Rd_tag·=·"TEXT"))),·Rd_tag·=·"\\item"),·
799 ········structure("\n",·Rd_tag·=·"TEXT"),·structure("\n",·Rd_tag·=·"TEXT"),·799 ········structure("\n",·Rd_tag·=·"TEXT"),·structure("\n",·Rd_tag·=·"TEXT"),·
800 ········structure(list(list(structure("original",·Rd_tag·=·"TEXT")),·800 ········structure(list(list(structure("original",·Rd_tag·=·"TEXT")),·
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11.5 KB
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11.4 KB
paths.rds-content
    
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