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1 | ·497de81160aed872f3b0947dce9f6a74·880204·libdevel·optional·libopenms-dev_2.6.0+cleaned1-4_arm64.deb | ||
2 | ·6c63a65661a9b68696a696c89fe4056f·219351784·debug·optional·libopenms2.6.0-dbgsym_2.6.0+cleaned1-4_arm64.deb | ||
3 | · | 1 | ·dd5da8790775a9e79e2a61c5b50d81e1·880204·libdevel·optional·libopenms-dev_2.6.0+cleaned1-4_arm64.deb |
2 | ·5675bb886469f6125b49bcb501bb9033·219349064·debug·optional·libopenms2.6.0-dbgsym_2.6.0+cleaned1-4_arm64.deb | ||
3 | ·3bf9d8000bfbe49f1547a5b94f1b858d·7275160·libs·optional·libopenms2.6.0_2.6.0+cleaned1-4_arm64.deb | ||
4 | ·7c8a3ea518c636cb086c11e6f4ad1033·4291064·science·optional·openms-common_2.6.0+cleaned1-4_all.deb | 4 | ·7c8a3ea518c636cb086c11e6f4ad1033·4291064·science·optional·openms-common_2.6.0+cleaned1-4_all.deb |
5 | · | 5 | ·779a2099d650ae8c18ac4ffcbb9711a9·43028116·doc·optional·openms-doc_2.6.0+cleaned1-4_all.deb |
6 | ·daf16ac3814bc02de25abd7824aef9a6·53584·science·optional·openms_2.6.0+cleaned1-4_all.deb | 6 | ·daf16ac3814bc02de25abd7824aef9a6·53584·science·optional·openms_2.6.0+cleaned1-4_all.deb |
7 | ·30c7f40bc86848971436f1836052758d·84748116·debug·optional·topp-dbgsym_2.6.0+cleaned1-4_arm64.deb | 7 | ·30c7f40bc86848971436f1836052758d·84748116·debug·optional·topp-dbgsym_2.6.0+cleaned1-4_arm64.deb |
8 | · | 8 | ·142b86ab8a2995de7ac0a3dc7fb79f88·2834000·science·optional·topp_2.6.0+cleaned1-4_arm64.deb |
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46 | //·$Maintainer:·Chris·Bielow·$ | 46 | //·$Maintainer:·Chris·Bielow·$ |
47 | //·$Authors:·$ | 47 | //·$Authors:·$ |
48 | //·-------------------------------------------------------------------------- | 48 | //·-------------------------------------------------------------------------- |
49 | #ifndef·OPENMS_PACKAGE_VERSION_H | 49 | #ifndef·OPENMS_PACKAGE_VERSION_H |
50 | #define·OPENMS_PACKAGE_VERSION_H | 50 | #define·OPENMS_PACKAGE_VERSION_H |
51 | #define·OPENMS_PACKAGE_VERSION·"2.6.0-pre-exported-2023122 | 51 | #define·OPENMS_PACKAGE_VERSION·"2.6.0-pre-exported-20231224" |
52 | #define·OPENMS_GIT_SHA1·"exported" | 52 | #define·OPENMS_GIT_SHA1·"exported" |
53 | #define·OPENMS_GIT_BRANCH·"exported" | 53 | #define·OPENMS_GIT_BRANCH·"exported" |
54 | #endif | 54 | #endif |
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1 | -rw-r--r--···0········0········0········4·2023-12-23·14:20:41.000000·debian-binary | 1 | -rw-r--r--···0········0········0········4·2023-12-23·14:20:41.000000·debian-binary |
2 | -rw-r--r--···0········0········0·····1644·2023-12-23·14:20:41.000000·control.tar.xz | 2 | -rw-r--r--···0········0········0·····1644·2023-12-23·14:20:41.000000·control.tar.xz |
3 | -rw-r--r--···0········0········0··727 | 3 | -rw-r--r--···0········0········0··7273324·2023-12-23·14:20:41.000000·data.tar.xz |
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1 | Displaying·notes·found·in:·.note.gnu.property | 1 | Displaying·notes·found·in:·.note.gnu.property |
2 | ··Owner················Data·size·» Description | 2 | ··Owner················Data·size·» Description |
3 | ··GNU··················0x00000010» NT_GNU_PROPERTY_TYPE_0» ······Properties:·AArch64·feature:·BTI,·PAC | 3 | ··GNU··················0x00000010» NT_GNU_PROPERTY_TYPE_0» ······Properties:·AArch64·feature:·BTI,·PAC |
4 | Displaying·notes·found·in:·.note.gnu.build-id | 4 | Displaying·notes·found·in:·.note.gnu.build-id |
5 | ··Owner················Data·size·» Description | 5 | ··Owner················Data·size·» Description |
6 | ··GNU··················0x00000014» NT_GNU_BUILD_ID·(unique·build·ID·bitstring)» ····Build·ID:· | 6 | ··GNU··················0x00000014» NT_GNU_BUILD_ID·(unique·build·ID·bitstring)» ····Build·ID:·2208b9b5a07d096c67567e0faadf95378e27673c |
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13383 | Year·is·out·of·valid·range:·1400..9999 | 13383 | Year·is·out·of·valid·range:·1400..9999 |
13384 | Month·number·is·out·of·range·1..12 | 13384 | Month·number·is·out·of·range·1..12 |
13385 | Day·of·month·value·is·out·of·range·1..31 | 13385 | Day·of·month·value·is·out·of·range·1..31 |
13386 | could·not·convert·calendar·time·to·local·time | 13386 | could·not·convert·calendar·time·to·local·time |
13387 | Day·of·month·is·not·valid·for·year | 13387 | Day·of·month·is·not·valid·for·year |
13388 | Dec·23·2023 | 13388 | Dec·23·2023 |
13389 | 14:20:41 | 13389 | 14:20:41 |
13390 | 2.6.0-pre-exported-2023122 | 13390 | 2.6.0-pre-exported-20231224 |
13391 | exported | 13391 | exported |
13392 | Running:· | 13392 | Running:· |
13393 | Process·' | 13393 | Process·' |
13394 | '·failed·to·start.·Does·it·exist?·Is·it·executable? | 13394 | '·failed·to·start.·Does·it·exist?·Is·it·executable? |
13395 | '·crashed·hard·(segfault-like).·Please·check·the·log. | 13395 | '·crashed·hard·(segfault-like).·Please·check·the·log. |
13396 | '·did·not·finish·successfully·(exit·code:· | 13396 | '·did·not·finish·successfully·(exit·code:· |
13397 | ).·Please·check·the·log. | 13397 | ).·Please·check·the·log. |
Offset 538, 15 lines modified | Offset 538, 15 lines modified | ||
538 | ··0x012309e0·61722074·696d6520·746f206c·6f63616c·ar·time·to·local | 538 | ··0x012309e0·61722074·696d6520·746f206c·6f63616c·ar·time·to·local |
539 | ··0x012309f0·2074696d·65000000·44617920·6f66206d··time...Day·of·m | 539 | ··0x012309f0·2074696d·65000000·44617920·6f66206d··time...Day·of·m |
540 | ··0x01230a00·6f6e7468·20697320·6e6f7420·76616c69·onth·is·not·vali | 540 | ··0x01230a00·6f6e7468·20697320·6e6f7420·76616c69·onth·is·not·vali |
541 | ··0x01230a10·6420666f·72207965·61720000·00000000·d·for·year...... | 541 | ··0x01230a10·6420666f·72207965·61720000·00000000·d·for·year...... |
542 | ··0x01230a20·44656320·32332032·30323300·00000000·Dec·23·2023..... | 542 | ··0x01230a20·44656320·32332032·30323300·00000000·Dec·23·2023..... |
543 | ··0x01230a30·31343a32·303a3431·00000000·00000000·14:20:41........ | 543 | ··0x01230a30·31343a32·303a3431·00000000·00000000·14:20:41........ |
544 | ··0x01230a40·322e362e·302d7072·652d6578·706f7274·2.6.0-pre-export | 544 | ··0x01230a40·322e362e·302d7072·652d6578·706f7274·2.6.0-pre-export |
545 | ··0x01230a50·65642d32·30323331·32323 | 545 | ··0x01230a50·65642d32·30323331·32323400·00000000·ed-20231224..... |
546 | ··0x01230a60·6578706f·72746564·00000000·00000000·exported........ | 546 | ··0x01230a60·6578706f·72746564·00000000·00000000·exported........ |
547 | ··0x01230a70·52756e6e·696e673a·20000000·00000000·Running:·....... | 547 | ··0x01230a70·52756e6e·696e673a·20000000·00000000·Running:·....... |
548 | ··0x01230a80·50726f63·65737320·27000000·00000000·Process·'....... | 548 | ··0x01230a80·50726f63·65737320·27000000·00000000·Process·'....... |
549 | ··0x01230a90·27206661·696c6564·20746f20·73746172·'·failed·to·star | 549 | ··0x01230a90·27206661·696c6564·20746f20·73746172·'·failed·to·star |
550 | ··0x01230aa0·742e2044·6f657320·69742065·78697374·t.·Does·it·exist | 550 | ··0x01230aa0·742e2044·6f657320·69742065·78697374·t.·Does·it·exist |
551 | ··0x01230ab0·3f204973·20697420·65786563·75746162·?·Is·it·executab | 551 | ··0x01230ab0·3f204973·20697420·65786563·75746162·?·Is·it·executab |
552 | ··0x01230ac0·6c653f00·00000000·27206372·61736865·le?.....'·crashe | 552 | ··0x01230ac0·6c653f00·00000000·27206372·61736865·le?.....'·crashe |
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1 | Hex·dump·of·section·'.gnu_debuglink': | 1 | Hex·dump·of·section·'.gnu_debuglink': |
2 | ··0x00000000·39336265·35646539·63663436·35376435·93be5de9cf4657d5 | ||
3 | ··0x000000 | 2 | ··0x00000000·30386239·62356130·37643039·36633637·08b9b5a07d096c67 |
3 | ··0x00000010·35363765·30666161·64663935·33373865·567e0faadf95378e | ||
4 | ··0x00000020·3 | 4 | ··0x00000020·32373637·33632e64·65627567·00000000·27673c.debug.... |
5 | ··0x00000030· | 5 | ··0x00000030·1a031216····························.... |
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1 | -rw-r--r--···0········0········0········4·2023-12-23·14:20:41.000000·debian-binary | 1 | -rw-r--r--···0········0········0········4·2023-12-23·14:20:41.000000·debian-binary |
2 | -rw-r--r--···0········0········0····31376·2023-12-23·14:20:41.000000·control.tar.xz | 2 | -rw-r--r--···0········0········0····31376·2023-12-23·14:20:41.000000·control.tar.xz |
3 | -rw-r--r--···0········0········0·4299654 | 3 | -rw-r--r--···0········0········0·42996548·2023-12-23·14:20:41.000000·data.tar.xz |
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1 | OpenMS·Tutorial | 1 | OpenMS·Tutorial |
2 | Version:·2.6.0-pre-exported-2023122 | 2 | Version:·2.6.0-pre-exported-20231224 |
3 | \xcContents | 3 | \xcContents |
4 | 1 | 4 | 1 |
5 | OpenMS·Developer·Quickstart·Guide | 5 | OpenMS·Developer·Quickstart·Guide |
6 | 1 | 6 | 1 |
7 | Introduction·.·.·.·.·.·.·.·.·.·.·.·.·.·.·.·.·.·.·.·.·.·.·.·.·.·.·.·.·.·.·.·.·.·.·.·.·.·.·.·.·.·.·.·.·.·. | 7 | Introduction·.·.·.·.·.·.·.·.·.·.·.·.·.·.·.·.·.·.·.·.·.·.·.·.·.·.·.·.·.·.·.·.·.·.·.·.·.·.·.·.·.·.·.·.·.·. |
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1 | TOPP·and·TOPPView·Tutorial | 1 | TOPP·and·TOPPView·Tutorial |
2 | Version:·2.6.0-pre-exported-2023122 | 2 | Version:·2.6.0-pre-exported-20231224 |
3 | \xcContents | 3 | \xcContents |
4 | 1 | 4 | 1 |
5 | Concepts | 5 | Concepts |
6 | 4 | 6 | 4 |
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1 | -rw-r--r--···0········0········0········4·2023-12-23·14:20:41.000000·debian-binary | 1 | -rw-r--r--···0········0········0········4·2023-12-23·14:20:41.000000·debian-binary |
2 | -rw-r--r--···0········0········0·····6268·2023-12-23·14:20:41.000000·control.tar.xz | 2 | -rw-r--r--···0········0········0·····6268·2023-12-23·14:20:41.000000·control.tar.xz |
3 | -rw-r--r--···0········0········0··28275 | 3 | -rw-r--r--···0········0········0··2827540·2023-12-23·14:20:41.000000·data.tar.xz |
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190 | -rw-r--r--···0·root·········(0)·root·········(0)····38745·2020-10-01·13:46:20.000000·./usr/share/doc/topp/changelog.gz | 190 | -rw-r--r--···0·root·········(0)·root·········(0)····38745·2020-10-01·13:46:20.000000·./usr/share/doc/topp/changelog.gz |
191 | -rw-r--r--···0·root·········(0)·root·········(0)····31665·2023-12-23·08:54:50.000000·./usr/share/doc/topp/copyright | 191 | -rw-r--r--···0·root·········(0)·root·········(0)····31665·2023-12-23·08:54:50.000000·./usr/share/doc/topp/copyright |
192 | drwxr-xr-x···0·root·········(0)·root·········(0)········0·2023-12-23·14:20:41.000000·./usr/share/lintian/ | 192 | drwxr-xr-x···0·root·········(0)·root·········(0)········0·2023-12-23·14:20:41.000000·./usr/share/lintian/ |
193 | drwxr-xr-x···0·root·········(0)·root·········(0)········0·2023-12-23·14:20:41.000000·./usr/share/lintian/overrides/ | 193 | drwxr-xr-x···0·root·········(0)·root·········(0)········0·2023-12-23·14:20:41.000000·./usr/share/lintian/overrides/ |
194 | -rw-r--r--···0·root·········(0)·root·········(0)·······26·2023-12-23·08:47:22.000000·./usr/share/lintian/overrides/topp | 194 | -rw-r--r--···0·root·········(0)·root·········(0)·······26·2023-12-23·08:47:22.000000·./usr/share/lintian/overrides/topp |
195 | drwxr-xr-x···0·root·········(0)·root·········(0)········0·2023-12-23·14:20:41.000000·./usr/share/man/ | 195 | drwxr-xr-x···0·root·········(0)·root·········(0)········0·2023-12-23·14:20:41.000000·./usr/share/man/ |
196 | drwxr-xr-x···0·root·········(0)·root·········(0)········0·2023-12-23·14:20:41.000000·./usr/share/man/man1/ | 196 | drwxr-xr-x···0·root·········(0)·root·········(0)········0·2023-12-23·14:20:41.000000·./usr/share/man/man1/ |
197 | -rw-r--r--···0·root·········(0)·root·········(0)·····59 | 197 | -rw-r--r--···0·root·········(0)·root·········(0)·····5940·2023-12-23·14:20:41.000000·./usr/share/man/man1/topp.1.gz |
198 | drwxr-xr-x···0·root·········(0)·root·········(0)········0·2023-12-23·14:20:41.000000·./usr/share/metainfo/ | 198 | drwxr-xr-x···0·root·········(0)·root·········(0)········0·2023-12-23·14:20:41.000000·./usr/share/metainfo/ |
199 | -rw-r--r--···0·root·········(0)·root·········(0)·····1413·2020-10-01·13:46:20.000000·./usr/share/metainfo/TOPPAS.appdata.xml | 199 | -rw-r--r--···0·root·········(0)·root·········(0)·····1413·2020-10-01·13:46:20.000000·./usr/share/metainfo/TOPPAS.appdata.xml |
200 | -rw-r--r--···0·root·········(0)·root·········(0)·····1709·2020-10-01·13:46:20.000000·./usr/share/metainfo/TOPPView.appdata.xml | 200 | -rw-r--r--···0·root·········(0)·root·········(0)·····1709·2020-10-01·13:46:20.000000·./usr/share/metainfo/TOPPView.appdata.xml |
201 | drwxr-xr-x···0·root·········(0)·root·········(0)········0·2023-12-23·14:20:41.000000·./usr/share/pixmaps/ | 201 | drwxr-xr-x···0·root·········(0)·root·········(0)········0·2023-12-23·14:20:41.000000·./usr/share/pixmaps/ |
202 | -rw-r--r--···0·root·········(0)·root·········(0)·····5833·2023-12-23·14:20:41.000000·./usr/share/pixmaps/TOPPAS.xpm | 202 | -rw-r--r--···0·root·········(0)·root·········(0)·····5833·2023-12-23·14:20:41.000000·./usr/share/pixmaps/TOPPAS.xpm |
203 | -rw-r--r--···0·root·········(0)·root·········(0)·····5098·2023-12-23·14:20:41.000000·./usr/share/pixmaps/TOPPView.xpm | 203 | -rw-r--r--···0·root·········(0)·root·········(0)·····5098·2023-12-23·14:20:41.000000·./usr/share/pixmaps/TOPPView.xpm |
204 | lrwxrwxrwx···0·root·········(0)·root·········(0)········0·2023-12-23·14:20:41.000000·./usr/share/man/man1/AccurateMassSearch.1.gz·->·topp.1.gz | 204 | lrwxrwxrwx···0·root·········(0)·root·········(0)········0·2023-12-23·14:20:41.000000·./usr/share/man/man1/AccurateMassSearch.1.gz·->·topp.1.gz |
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16 | Initiative·(PSI)·formats·for·MS·data·and·supports·easy·integration·of | 16 | Initiative·(PSI)·formats·for·MS·data·and·supports·easy·integration·of |
17 | tools·into·workflow·engines·like·Knime,·Galaxy,·WS-Pgrade,·and·TOPPAS | 17 | tools·into·workflow·engines·like·Knime,·Galaxy,·WS-Pgrade,·and·TOPPAS |
18 | via·the·TOPPtools·concept·and·a·unified·parameter·handling. | 18 | via·the·TOPPtools·concept·and·a·unified·parameter·handling. |
19 | .SH·"AVAILABLE·MODULES" | 19 | .SH·"AVAILABLE·MODULES" |
20 | \fBAccurateMassSearch\fR·--·Match·MS·signals·to·molecules·from·a·database·by·mass. | 20 | \\fBAccurateMassSearch\\fR·--·Match·MS·signals·to·molecules·from·a·database·by·mass. |
21 | \fBAssayGeneratorMetabo\fR·--·Assay·library·generation·from·DDA·data·(Metabolomics). | 21 | \\fBAssayGeneratorMetabo\\fR·--·Assay·library·generation·from·DDA·data·(Metabolomics). |
22 | \fBBaselineFilter\fR·--·Removes·the·baseline·from·profile·spectra·using·a·top-hat·filter. | 22 | \\fBBaselineFilter\\fR·--·Removes·the·baseline·from·profile·spectra·using·a·top-hat·filter. |
23 | \fBCVInspector\fR·--·A·tool·for·visualization·and·validation·of·PSI·mapping·and·CV·files. | 23 | \\fBCVInspector\\fR·--·A·tool·for·visualization·and·validation·of·PSI·mapping·and·CV·files. |
24 | \fBClusterMassTraces\fR·--·Creates·pseudo·spectra. | 24 | \\fBClusterMassTraces\\fR·--·Creates·pseudo·spectra. |
25 | \fBClusterMassTracesByPrecursor\fR·--·Correlate·precursor·masstraces·with·fragment·ion·masstraces·in·SWATH·maps·based·on·their·elution·profile. | 25 | \\fBClusterMassTracesByPrecursor\\fR·--·Correlate·precursor·masstraces·with·fragment·ion·masstraces·in·SWATH·maps·based·on·their·elution·profile. |
26 | \fBCometAdapter\fR·--·Annotates·MS/MS·spectra·using·Comet. | 26 | \\fBCometAdapter\\fR·--·Annotates·MS/MS·spectra·using·Comet. |
27 | \fBCompNovo\fR·--·Performs·a·de·novo·peptide·identification·using·the·CompNovo·engine. | 27 | \\fBCompNovo\\fR·--·Performs·a·de·novo·peptide·identification·using·the·CompNovo·engine. |
28 | \fBCompNovoCID\fR·--·Performs·a·de·novo·peptide·identification·using·the·CompNovo·engine. | 28 | \\fBCompNovoCID\\fR·--·Performs·a·de·novo·peptide·identification·using·the·CompNovo·engine. |
29 | \fBConsensusID\fR·--·Computes·a·consensus·of·peptide·identifications·of·several·identification·engines. | 29 | \\fBConsensusID\\fR·--·Computes·a·consensus·of·peptide·identifications·of·several·identification·engines. |
30 | \fBConsensusMapNormalizer\fR·--·Normalizes·maps·of·one·consensusXML·file. | 30 | \\fBConsensusMapNormalizer\\fR·--·Normalizes·maps·of·one·consensusXML·file. |
31 | \fBCruxAdapter\fR·--·Identifies·MS/MS·spectra·using·Crux. | 31 | \\fBCruxAdapter\\fR·--·Identifies·MS/MS·spectra·using·Crux. |
32 | \fBDTAExtractor\fR·--·Extracts·spectra·of·an·MS·run·file·to·several·files·in·DTA·format. | 32 | \\fBDTAExtractor\\fR·--·Extracts·spectra·of·an·MS·run·file·to·several·files·in·DTA·format. |
33 | \fBDatabaseFilter\fR·--·Filters·a·protein·database·(FASTA·format)·based·on·identified·proteins. | 33 | \\fBDatabaseFilter\\fR·--·Filters·a·protein·database·(FASTA·format)·based·on·identified·proteins. |
34 | \fBDatabaseSuitability\fR·--·Computes·a·suitability·score·for·a·database·which·was·used·for·a·peptide·identification·search.·Also·reports·the·quality·of·LC-MS·spectra. | 34 | \\fBDatabaseSuitability\\fR·--·Computes·a·suitability·score·for·a·database·which·was·used·for·a·peptide·identification·search.·Also·reports·the·quality·of·LC-MS·spectra. |
35 | \fBDeMeanderize\fR·--·Orders·the·spectra·of·MALDI·spotting·plates·correctly. | 35 | \\fBDeMeanderize\\fR·--·Orders·the·spectra·of·MALDI·spotting·plates·correctly. |
36 | \fBDecharger\fR·--·Decharges·and·merges·different·feature·charge·variants·of·the·same·peptide. | 36 | \\fBDecharger\\fR·--·Decharges·and·merges·different·feature·charge·variants·of·the·same·peptide. |
37 | \fBDecoyDatabase\fR·--·Create·decoy·sequence·database·from·forward·sequence·database. | 37 | \\fBDecoyDatabase\\fR·--·Create·decoy·sequence·database·from·forward·sequence·database. |
38 | \fBDigestor\fR·--·Digests·a·protein·database·in-silico. | 38 | \\fBDigestor\\fR·--·Digests·a·protein·database·in-silico. |
39 | \fBDigestorMotif\fR·--·digests·a·protein·database·in-silico. | 39 | \\fBDigestorMotif\\fR·--·digests·a·protein·database·in-silico. |
40 | \fBEICExtractor\fR·--·Extracts·intensities·from·dedicates·positions·in·a·LC/MS·map. | 40 | \\fBEICExtractor\\fR·--·Extracts·intensities·from·dedicates·positions·in·a·LC/MS·map. |
41 | \fBERPairFinder\fR·--·Util·which·can·be·used·to·evaluate·pair·ratios·on·enhanced·resolution·(zoom)·scans. | 41 | \\fBERPairFinder\\fR·--·Util·which·can·be·used·to·evaluate·pair·ratios·on·enhanced·resolution·(zoom)·scans. |
42 | \fBEpifany\fR·--·Runs·a·Bayesian·protein·inference. | 42 | \\fBEpifany\\fR·--·Runs·a·Bayesian·protein·inference. |
43 | \fBExecutePipeline\fR·--·Executes·workflows·created·by·TOPPAS. | 43 | \\fBExecutePipeline\\fR·--·Executes·workflows·created·by·TOPPAS. |
44 | \fBExternalCalibration\fR·--·Applies·an·external·mass·recalibration. | 44 | \\fBExternalCalibration\\fR·--·Applies·an·external·mass·recalibration. |
45 | \fBFFEval\fR·--·Evaluation·tool·for·feature·detection·algorithms. | 45 | \\fBFFEval\\fR·--·Evaluation·tool·for·feature·detection·algorithms. |
46 | \fBFalseDiscoveryRate\fR·--·Estimates·the·false·discovery·rate·on·peptide·and·protein·level·using·decoy·searches. | 46 | \\fBFalseDiscoveryRate\\fR·--·Estimates·the·false·discovery·rate·on·peptide·and·protein·level·using·decoy·searches. |
47 | \fBFeatureFinderCentroided\fR·--·Detects·two-dimensional·features·in·LC-MS·data. | 47 | \\fBFeatureFinderCentroided\\fR·--·Detects·two-dimensional·features·in·LC-MS·data. |
48 | \fBFeatureFinderIdentification\fR·--·Detects·features·in·MS1·data·based·on·peptide·identifications. | 48 | \\fBFeatureFinderIdentification\\fR·--·Detects·features·in·MS1·data·based·on·peptide·identifications. |
49 | \fBFeatureFinderIsotopeWavelet\fR·--·Detects·two-dimensional·features·in·LC-MS·data. | 49 | \\fBFeatureFinderIsotopeWavelet\\fR·--·Detects·two-dimensional·features·in·LC-MS·data. |
50 | \fBFeatureFinderMRM\fR·--·Detects·two-dimensional·features·in·LC-MS·data. | 50 | \\fBFeatureFinderMRM\\fR·--·Detects·two-dimensional·features·in·LC-MS·data. |
51 | \fBFeatureFinderMetabo\fR·--·Assembles·metabolite·features·from·centroided·(LC-)MS·data·using·the·mass·trace·approach. | 51 | \\fBFeatureFinderMetabo\\fR·--·Assembles·metabolite·features·from·centroided·(LC-)MS·data·using·the·mass·trace·approach. |
52 | \fBFeatureFinderMetaboIdent\fR·--·Detects·features·in·MS1·data·based·on·metabolite·identifications. | 52 | \\fBFeatureFinderMetaboIdent\\fR·--·Detects·features·in·MS1·data·based·on·metabolite·identifications. |
53 | \fBFeatureFinderMultiplex\fR·--·Determination·of·peak·ratios·in·LC-MS·data. | 53 | \\fBFeatureFinderMultiplex\\fR·--·Determination·of·peak·ratios·in·LC-MS·data. |
54 | \fBFeatureFinderSuperHirn\fR·--·Finds·mass·spectrometric·features·in·mass·spectra. | 54 | \\fBFeatureFinderSuperHirn\\fR·--·Finds·mass·spectrometric·features·in·mass·spectra. |
55 | \fBFeatureLinkerLabeled\fR·--·Groups·corresponding·isotope-labeled·features·in·a·feature·map. | 55 | \\fBFeatureLinkerLabeled\\fR·--·Groups·corresponding·isotope-labeled·features·in·a·feature·map. |
56 | \fBFeatureLinkerUnlabeled\fR·--·Groups·corresponding·features·from·multiple·maps. | 56 | \\fBFeatureLinkerUnlabeled\\fR·--·Groups·corresponding·features·from·multiple·maps. |
57 | \fBFeatureLinkerUnlabeledKD\fR·--·Groups·corresponding·features·from·multiple·maps. | 57 | \\fBFeatureLinkerUnlabeledKD\\fR·--·Groups·corresponding·features·from·multiple·maps. |
58 | \fBFeatureLinkerUnlabeledQT\fR·--·Groups·corresponding·features·from·multiple·maps. | 58 | \\fBFeatureLinkerUnlabeledQT\\fR·--·Groups·corresponding·features·from·multiple·maps. |
59 | \fBFidoAdapter\fR·--·Runs·the·protein·inference·engine·Fido. | 59 | \\fBFidoAdapter\\fR·--·Runs·the·protein·inference·engine·Fido. |
60 | \fBFileConverter\fR·--·Converts·between·different·MS·file·formats. | 60 | \\fBFileConverter\\fR·--·Converts·between·different·MS·file·formats. |
61 | \fBFileFilter\fR·--·Extracts·or·manipulates·portions·of·data·from·peak,·feature·or·consensus-feature·files. | 61 | \\fBFileFilter\\fR·--·Extracts·or·manipulates·portions·of·data·from·peak,·feature·or·consensus-feature·files. |
62 | \fBFileInfo\fR·--·Shows·basic·information·about·the·file,·such·as·data·ranges·and·file·type. | 62 | \\fBFileInfo\\fR·--·Shows·basic·information·about·the·file,·such·as·data·ranges·and·file·type. |
63 | \fBFileMerger\fR·--·Merges·several·MS·files·into·one·file. | 63 | \\fBFileMerger\\fR·--·Merges·several·MS·files·into·one·file. |
64 | \fBFuzzyDiff\fR·--·Compares·two·files,·tolerating·numeric·differences. | 64 | \\fBFuzzyDiff\\fR·--·Compares·two·files,·tolerating·numeric·differences. |
65 | \fBGNPSExport\fR·--·Tool·to·export·consensus·features·into·MGF·format. | 65 | \\fBGNPSExport\\fR·--·Tool·to·export·consensus·features·into·MGF·format. |
66 | \fBGenericWrapper\fR·--·Allows·the·generic·wrapping·of·external·tools. | 66 | \\fBGenericWrapper\\fR·--·Allows·the·generic·wrapping·of·external·tools. |
67 | \fBHighResPrecursorMassCorrector\fR·--·Corrects·the·precursor·mass·and·charge·determined·by·the·instrument·software. | 67 | \\fBHighResPrecursorMassCorrector\\fR·--·Corrects·the·precursor·mass·and·charge·determined·by·the·instrument·software. |
68 | \fBIDConflictResolver\fR·--·Resolves·ambiguous·annotations·of·features·with·peptide·identifications. | 68 | \\fBIDConflictResolver\\fR·--·Resolves·ambiguous·annotations·of·features·with·peptide·identifications. |
69 | \fBIDDecoyProbability\fR·--·Estimates·peptide·probabilities·using·a·decoy·search·strategy. | 69 | \\fBIDDecoyProbability\\fR·--·Estimates·peptide·probabilities·using·a·decoy·search·strategy. |
70 | \fBIDExtractor\fR·--·Extracts·'n'·peptides·randomly·or·best·'n'·from·idXML·files. | 70 | \\fBIDExtractor\\fR·--·Extracts·'n'·peptides·randomly·or·best·'n'·from·idXML·files. |
71 | \fBIDFileConverter\fR·--·Converts·identification·engine·file·formats. | 71 | \\fBIDFileConverter\\fR·--·Converts·identification·engine·file·formats. |
72 | \fBIDFilter\fR·--·Filters·results·from·protein·or·peptide·identification·engines·based·on·different·criteria. | 72 | \\fBIDFilter\\fR·--·Filters·results·from·protein·or·peptide·identification·engines·based·on·different·criteria. |
73 | \fBIDMapper\fR·--·Assigns·protein/peptide·identifications·to·features·or·consensus·features. | 73 | \\fBIDMapper\\fR·--·Assigns·protein/peptide·identifications·to·features·or·consensus·features. |
74 | \fBIDMassAccuracy\fR·--·Calculates·a·distribution·of·the·mass·error·from·given·mass·spectra·and·IDs. | 74 | \\fBIDMassAccuracy\\fR·--·Calculates·a·distribution·of·the·mass·error·from·given·mass·spectra·and·IDs. |
75 | \fBIDMerger\fR·--·Merges·several·protein/peptide·identification·files·into·one·file. | 75 | \\fBIDMerger\\fR·--·Merges·several·protein/peptide·identification·files·into·one·file. |
76 | \fBIDPosteriorErrorProbability\fR·--·Estimates·probabilities·for·incorrectly·assigned·peptide·sequences·and·a·set·of·search·engine·scores·using·a·mixture·model. | 76 | \\fBIDPosteriorErrorProbability\\fR·--·Estimates·probabilities·for·incorrectly·assigned·peptide·sequences·and·a·set·of·search·engine·scores·using·a·mixture·model. |
77 | \fBIDRTCalibration\fR·--·Can·be·used·to·calibrate·RTs·of·peptide·hits·linearly·to·standards. | 77 | \\fBIDRTCalibration\\fR·--·Can·be·used·to·calibrate·RTs·of·peptide·hits·linearly·to·standards. |
78 | \fBIDRipper\fR·--·Split·protein/peptide·identification·file·into·several·files·according·to·annotated·file·origin. | 78 | \\fBIDRipper\\fR·--·Split·protein/peptide·identification·file·into·several·files·according·to·annotated·file·origin. |
79 | \fBIDScoreSwitcher\fR·--·Switches·between·different·scores·of·peptide·or·protein·hits·in·identification·data. | 79 | \\fBIDScoreSwitcher\\fR·--·Switches·between·different·scores·of·peptide·or·protein·hits·in·identification·data. |
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2 | -rw-r--r--···0········0········0······776·2023-12-23·14:20:41.000000·control.tar.xz | 2 | -rw-r--r--···0········0········0······776·2023-12-23·14:20:41.000000·control.tar.xz |
3 | -rw-r--r--···0········0········0·2193 | 3 | -rw-r--r--···0········0········0·219348096·2023-12-23·14:20:41.000000·data.tar.xz |
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6 | Maintainer:·The·Debichem·Group·<debichem-devel@lists.alioth.debian.org> | 6 | Maintainer:·The·Debichem·Group·<debichem-devel@lists.alioth.debian.org> |
7 | Installed-Size:·218364 | 7 | Installed-Size:·218364 |
8 | Depends:·libopenms2.6.0·(=·2.6.0+cleaned1-4) | 8 | Depends:·libopenms2.6.0·(=·2.6.0+cleaned1-4) |
9 | Section:·debug | 9 | Section:·debug |
10 | Priority:·optional | 10 | Priority:·optional |
11 | Multi-Arch:·same | 11 | Multi-Arch:·same |
12 | Description:·debug·symbols·for·libopenms2.6.0 | 12 | Description:·debug·symbols·for·libopenms2.6.0 |
13 | Build-Ids:·02de70d6bf1a106b6bf39826914cfa75f5a60d77·18e3c3ae401a9989da2ca1be3a7e92c4e5fac3e7· | 13 | Build-Ids:·02de70d6bf1a106b6bf39826914cfa75f5a60d77·18e3c3ae401a9989da2ca1be3a7e92c4e5fac3e7·2208b9b5a07d096c67567e0faadf95378e27673c·98b362769983ea4783a47e0a4c7daa280d95cbd7 |
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2 | usr/lib/debug/.build-id/18/e3c3ae401a9989da2ca1be3a7e92c4e5fac3e7.debug | 2 | usr/lib/debug/.build-id/18/e3c3ae401a9989da2ca1be3a7e92c4e5fac3e7.debug |
3 | usr/lib/debug/.build-id/22/08b9b5a07d096c67567e0faadf95378e27673c.debug | ||
3 | usr/lib/debug/.build-id/98/b362769983ea4783a47e0a4c7daa280d95cbd7.debug | 4 | usr/lib/debug/.build-id/98/b362769983ea4783a47e0a4c7daa280d95cbd7.debug |
4 | usr/lib/debug/.build-id/9f/93be5de9cf4657d599ae0ae756934d2006fc86.debug | ||
5 | usr/lib/debug/.dwz/aarch64-linux-gnu/libopenms2.6.0.debug | 5 | usr/lib/debug/.dwz/aarch64-linux-gnu/libopenms2.6.0.debug |
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6 | drwxr-xr-x···0·root·········(0)·root·········(0)········0·2023-12-23·14:20:41.000000·./usr/lib/debug/.build-id/02/ | 6 | drwxr-xr-x···0·root·········(0)·root·········(0)········0·2023-12-23·14:20:41.000000·./usr/lib/debug/.build-id/02/ |
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8 | drwxr-xr-x···0·root·········(0)·root·········(0)········0·2023-12-23·14:20:41.000000·./usr/lib/debug/.build-id/18/ | 8 | drwxr-xr-x···0·root·········(0)·root·········(0)········0·2023-12-23·14:20:41.000000·./usr/lib/debug/.build-id/18/ |
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10 | drwxr-xr-x···0·root·········(0)·root·········(0)········0·2023-12-23·14:20:41.000000·./usr/lib/debug/.build-id/98/ | 12 | drwxr-xr-x···0·root·········(0)·root·········(0)········0·2023-12-23·14:20:41.000000·./usr/lib/debug/.build-id/98/ |
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14 | drwxr-xr-x···0·root·········(0)·root·········(0)········0·2023-12-23·14:20:41.000000·./usr/lib/debug/.dwz/ | 14 | drwxr-xr-x···0·root·········(0)·root·········(0)········0·2023-12-23·14:20:41.000000·./usr/lib/debug/.dwz/ |
15 | drwxr-xr-x···0·root·········(0)·root·········(0)········0·2023-12-23·14:20:41.000000·./usr/lib/debug/.dwz/aarch64-linux-gnu/ | 15 | drwxr-xr-x···0·root·········(0)·root·········(0)········0·2023-12-23·14:20:41.000000·./usr/lib/debug/.dwz/aarch64-linux-gnu/ |
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17 | drwxr-xr-x···0·root·········(0)·root·········(0)········0·2023-12-23·14:20:41.000000·./usr/share/ | 17 | drwxr-xr-x···0·root·········(0)·root·········(0)········0·2023-12-23·14:20:41.000000·./usr/share/ |
18 | drwxr-xr-x···0·root·········(0)·root·········(0)········0·2023-12-23·14:20:41.000000·./usr/share/doc/ | 18 | drwxr-xr-x···0·root·········(0)·root·········(0)········0·2023-12-23·14:20:41.000000·./usr/share/doc/ |
19 | lrwxrwxrwx···0·root·········(0)·root·········(0)········0·2023-12-23·14:20:41.000000·./usr/share/doc/libopenms2.6.0-dbgsym·->·libopenms2.6.0 | 19 | lrwxrwxrwx···0·root·········(0)·root·········(0)········0·2023-12-23·14:20:41.000000·./usr/share/doc/libopenms2.6.0-dbgsym·->·libopenms2.6.0 |
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1 | Displaying·notes·found·in:·.note.gnu.property | 1 | Displaying·notes·found·in:·.note.gnu.property |
2 | ··Owner················Data·size·» Description | 2 | ··Owner················Data·size·» Description |
3 | ··GNU··················0x00000010» NT_GNU_PROPERTY_TYPE_0» ······Properties:·AArch64·feature:·BTI,·PAC | 3 | ··GNU··················0x00000010» NT_GNU_PROPERTY_TYPE_0» ······Properties:·AArch64·feature:·BTI,·PAC |
4 | Displaying·notes·found·in:·.note.gnu.build-id | 4 | Displaying·notes·found·in:·.note.gnu.build-id |
5 | ··Owner················Data·size·» Description | 5 | ··Owner················Data·size·» Description |
6 | ··GNU··················0x00000014» NT_GNU_BUILD_ID·(unique·build·ID·bitstring)» ····Build·ID:· | 6 | ··GNU··················0x00000014» NT_GNU_BUILD_ID·(unique·build·ID·bitstring)» ····Build·ID:·2208b9b5a07d096c67567e0faadf95378e27673c |
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1 | GCC:·(Debian·14.2.0-8)·14.2.0 | 1 | 'g<GCC:·(Debian·14.2.0-8)·14.2.0 |
2 | S7^[8^4`> | 2 | S7^[8^4`> |
3 | 22j>`|~iO | 3 | 22j>`|~iO |
4 | >/>» t'O:Y | 4 | >/>» t'O:Y |
5 | o{3}?"}5 | 5 | o{3}?"}5 |
6 | yaQ_0^p· | 6 | yaQ_0^p· |
7 | w:jBd%#C | 7 | w:jBd%#C |
8 | [sG» pN·/ | 8 | [sG» pN·/ |