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1 ·3445aeb3bafedb3ece7748f22560021b·43418212·science·optional·gromacs-data_2024.4-1_all.deb1 ·477899a657586e511ac60b63210be220·43418516·science·optional·gromacs-data_2024.4-1_all.deb
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3 ·66ec20c9c42e5e08e3d11a65c7334f0c·63960·science·optional·gromacs_2024.4-1_amd64.deb3 ·66ec20c9c42e5e08e3d11a65c7334f0c·63960·science·optional·gromacs_2024.4-1_amd64.deb
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7 ·87e7e452247e6ab89d9fb092bc0cd3f6·33348·libdevel·optional·libnblib-gmx-dev_2024.4-1_amd64.deb7 ·87e7e452247e6ab89d9fb092bc0cd3f6·33348·libdevel·optional·libnblib-gmx-dev_2024.4-1_amd64.deb
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1 -rw-r--r--···0········0········0········4·2024-11-01·03:23:53.000000·debian-binary1 -rw-r--r--···0········0········0········4·2024-11-01·03:23:53.000000·debian-binary
2 -rw-r--r--···0········0········0···438832·2024-11-01·03:23:53.000000·control.tar.xz2 -rw-r--r--···0········0········0···438316·2024-11-01·03:23:53.000000·control.tar.xz
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1 Package:·gromacs-data1 Package:·gromacs-data
2 Source:·gromacs2 Source:·gromacs
3 Version:·2024.4-13 Version:·2024.4-1
4 Architecture:·all4 Architecture:·all
5 Maintainer:·Debichem·Team·<debichem-devel@lists.alioth.debian.org>5 Maintainer:·Debichem·Team·<debichem-devel@lists.alioth.debian.org>
6 Installed-Size:·3004926 Installed-Size:·300490
7 Depends:·libjs-mathjax7 Depends:·libjs-mathjax
8 Recommends:·gromacs8 Recommends:·gromacs
9 Section:·science9 Section:·science
10 Priority:·optional10 Priority:·optional
11 Multi-Arch:·foreign11 Multi-Arch:·foreign
12 Homepage:·https://www.gromacs.org/12 Homepage:·https://www.gromacs.org/
13 Description:·GROMACS·molecular·dynamics·sim,·data·and·documentation13 Description:·GROMACS·molecular·dynamics·sim,·data·and·documentation
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74 </div><!--·top·-->74 </div><!--·top·-->
75 <div><div·class="header">75 <div><div·class="header">
76 ··<div·class="headertitle"><div·class="title">Module·dependency·graph</div></div>76 ··<div·class="headertitle"><div·class="title">Module·dependency·graph</div></div>
77 </div><!--header-->77 </div><!--header-->
78 <div·class="contents">78 <div·class="contents">
79 <div·class="textblock"><p>The·graph·below·shows·the·dependencies·between·the·source·code·modules,·computed·from·include·statements·in·the·code.·For·documented·modules·(those·that·do·not·have·a·gray·background),·clicking·on·the·module·takes·you·to·the·module·documentation.·Legend·for·the·graph·can·be·found·below·the·graph.</p>79 <div·class="textblock"><p>The·graph·below·shows·the·dependencies·between·the·source·code·modules,·computed·from·include·statements·in·the·code.·For·documented·modules·(those·that·do·not·have·a·gray·background),·clicking·on·the·module·takes·you·to·the·module·documentation.·Legend·for·the·graph·can·be·found·below·the·graph.</p>
80 <div·class="dotgraph">80 <div·class="dotgraph">
81 <iframe·scrolling="no"·frameborder="0"·src="dot_module-deps.svg"·width="3524"·height="1583"><p><b>This·browser·is·not·able·to·show·SVG:·try·Firefox,·Chrome,·Safari,·or·Opera·instead.</b></p></iframe></div>81 <iframe·scrolling="no"·frameborder="0"·src="dot_module-deps.svg"·width="3434"·height="1580"><p><b>This·browser·is·not·able·to·show·SVG:·try·Firefox,·Chrome,·Safari,·or·Opera·instead.</b></p></iframe></div>
82 ·<h1><a·class="anchor"·id="autotoc_md49"></a>82 ·<h1><a·class="anchor"·id="autotoc_md49"></a>
83 Legend</h1>83 Legend</h1>
84 <p>The·graph·below·annotates·the·colors·and·line·styles·used·in·the·module·dependency·graph·above.·More·detailed·textual·annotation·is·below·the·graph.</p>84 <p>The·graph·below·annotates·the·colors·and·line·styles·used·in·the·module·dependency·graph·above.·More·detailed·textual·annotation·is·below·the·graph.</p>
85 <div·class="dotgraph">85 <div·class="dotgraph">
86 <iframe·scrolling="no"·frameborder="0"·src="dot_inline_dotgraph_2.svg"·width="440"·height="407"><p><b>This·browser·is·not·able·to·show·SVG:·try·Firefox,·Chrome,·Safari,·or·Opera·instead.</b></p></iframe></div>86 <iframe·scrolling="no"·frameborder="0"·src="dot_inline_dotgraph_2.svg"·width="440"·height="407"><p><b>This·browser·is·not·able·to·show·SVG:·try·Firefox,·Chrome,·Safari,·or·Opera·instead.</b></p></iframe></div>
87 <p>Node·colors:·</p><dl>87 <p>Node·colors:·</p><dl>
88 <dt>gray·background·</dt>88 <dt>gray·background·</dt>
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599 ····['mode_374',·['mode',·['../classgmx_1_1AnalysisNeighborhood.xhtml#a9410ce3c835d5282f742028ab17f4ab9',·1,·'gmx::AnalysisNeighborhood::mode()'],599 ····['mode_374',·['mode',·['../classgmx_1_1AnalysisNeighborhood.xhtml#a9410ce3c835d5282f742028ab17f4ab9',·1,·'gmx::AnalysisNeighborhood::mode()'],
600 ········['../autocorr_8cpp.xhtml#a605dbdf5c9c7c6edbb25ad8981e471d6',·1,·'MODE:&#160;autocorr.cpp'], 
601 ········['../classgmx_1_1AnalysisNeighborhoodSearch.xhtml#a78219a5c5c2431c6b18d8d07d1ab8f79',·1,·'gmx::AnalysisNeighborhoodSearch::mode()']600 ········['../classgmx_1_1AnalysisNeighborhoodSearch.xhtml#a78219a5c5c2431c6b18d8d07d1ab8f79',·1,·'gmx::AnalysisNeighborhoodSearch::mode()'],
 601 ········['../autocorr_8cpp.xhtml#a605dbdf5c9c7c6edbb25ad8981e471d6',·1,·'MODE:&#160;autocorr.cpp']
602 ····]],602 ····]],
603 ····['model_375',·['model',·['../classgmx_1_1CpuInfo.xhtml#a6757add18f05a16a301428ad74d482a5',·1,·'gmx::CpuInfo']]],603 ····['model_375',·['model',·['../classgmx_1_1CpuInfo.xhtml#a6757add18f05a16a301428ad74d482a5',·1,·'gmx::CpuInfo']]],
604 ····['modifiers_376',·['modifiers',·['../todo.xhtml#_todo000203',·1,·'Selection·modifiers'],604 ····['modifiers_376',·['modifiers',·['../todo.xhtml#_todo000203',·1,·'Selection·modifiers'],
605 ········['../page_module_selection_custom.xhtml#selmethods_modifiers',·1,·'Selection·modifiers']605 ········['../page_module_selection_custom.xhtml#selmethods_modifiers',·1,·'Selection·modifiers']
606 ····]],606 ····]],
607 ····['modifyqmmmtopology_377',·['modifyQMMMTopology',·['../classgmx_1_1QMMMOptions.xhtml#a9e32b3996bdf1598c84685846c3a9bc4',·1,·'gmx::QMMMOptions']]],607 ····['modifyqmmmtopology_377',·['modifyQMMMTopology',·['../classgmx_1_1QMMMOptions.xhtml#a9e32b3996bdf1598c84685846c3a9bc4',·1,·'gmx::QMMMOptions']]],
608 ····['modular_20simulator_378',·['modular·simulator',·['../group__module__modularsimulator.xhtml',·1,·'The·modular·simulator'],608 ····['modular_20simulator_378',·['modular·simulator',·['../group__module__modularsimulator.xhtml',·1,·'The·modular·simulator'],
Offset 613, 20 lines modifiedOffset 613, 20 lines modified
613 ····['modular_20simulator_20approach_379',·['The·modular·simulator·approach',·['../page_modularsimulator.xhtml#autotoc_md10',·1,·'']]],613 ····['modular_20simulator_20approach_379',·['The·modular·simulator·approach',·['../page_modularsimulator.xhtml#autotoc_md10',·1,·'']]],
614 ····['modular_20simulator_20checkpointing_20design_380',·['Notes·about·the·modular·simulator·checkpointing·design',·['../page_modularsimulator.xhtml#autotoc_md46',·1,·'']]],614 ····['modular_20simulator_20checkpointing_20design_380',·['Notes·about·the·modular·simulator·checkpointing·design',·['../page_modularsimulator.xhtml#autotoc_md46',·1,·'']]],
615 ····['modular_20simulator_20design_381',·['Modular·simulator·design',·['../page_modularsimulator.xhtml#autotoc_md45',·1,·'']]],615 ····['modular_20simulator_20design_381',·['Modular·simulator·design',·['../page_modularsimulator.xhtml#autotoc_md45',·1,·'']]],
616 ····['modularsimulator_382',·['ModularSimulator',·['../classgmx_1_1ModularSimulator.xhtml',·1,·'gmx']]],616 ····['modularsimulator_382',·['ModularSimulator',·['../classgmx_1_1ModularSimulator.xhtml',·1,·'gmx']]],
617 ····['modularsimulator_2ecpp_383',·['modularsimulator.cpp',·['../modularsimulator_8cpp.xhtml',·1,·'']]],617 ····['modularsimulator_2ecpp_383',·['modularsimulator.cpp',·['../modularsimulator_8cpp.xhtml',·1,·'']]],
618 ····['modularsimulator_2eh_384',·['modularsimulator.h',·['../modularsimulator_8h.xhtml',·1,·'']]],618 ····['modularsimulator_2eh_384',·['modularsimulator.h',·['../modularsimulator_8h.xhtml',·1,·'']]],
619 ····['modularsimulatoralgorithm_385',·['ModularSimulatorAlgorithm',·['../classgmx_1_1ModularSimulatorAlgorithm.xhtml',·1,·'gmx']]],619 ····['modularsimulatoralgorithm_385',·['ModularSimulatorAlgorithm',·['../classgmx_1_1ModularSimulatorAlgorithm.xhtml',·1,·'gmx']]],
620 ····['modularsimulatoralgorithmbuilder_386',·['modularsimulatoralgorithmbuilder',·['../classgmx_1_1ModularSimulatorAlgorithmBuilder.xhtml#a06b5b50d449e96e4aeaf242ce9dbf055',·1,·'gmx::ModularSimulatorAlgorithmBuilder::ModularSimulatorAlgorithmBuilder()'],620 ····['modularsimulatoralgorithmbuilder_386',·['modularsimulatoralgorithmbuilder',·['../classgmx_1_1ModularSimulatorAlgorithmBuilder.xhtml',·1,·'gmx::ModularSimulatorAlgorithmBuilder'],
621 ········['../classgmx_1_1ModularSimulatorAlgorithmBuilder.xhtml',·1,·'gmx::ModularSimulatorAlgorithmBuilder']621 ········['../classgmx_1_1ModularSimulatorAlgorithmBuilder.xhtml#a06b5b50d449e96e4aeaf242ce9dbf055',·1,·'gmx::ModularSimulatorAlgorithmBuilder::ModularSimulatorAlgorithmBuilder(compat::not_null&lt;·LegacySimulatorData·*·&gt;·legacySimulatorData,·std::unique_ptr&lt;·ReadCheckpointDataHolder·&gt;·checkpointDataHolder)']
622 ····]],622 ····]],
623 ····['modularsimulatoralgorithmbuilderhelper_387',·['modularsimulatoralgorithmbuilderhelper',·['../classgmx_1_1ModularSimulatorAlgorithmBuilderHelper.xhtml',·1,·'gmx::ModularSimulatorAlgorithmBuilderHelper'],623 ····['modularsimulatoralgorithmbuilderhelper_387',·['modularsimulatoralgorithmbuilderhelper',·['../classgmx_1_1ModularSimulatorAlgorithmBuilder.xhtml#ab50a12650263d7e07ffd08836dc5abbd',·1,·'gmx::ModularSimulatorAlgorithmBuilder::ModularSimulatorAlgorithmBuilderHelper'],
624 ········['../classgmx_1_1ModularSimulatorAlgorithmBuilder.xhtml#ab50a12650263d7e07ffd08836dc5abbd',·1,·'gmx::ModularSimulatorAlgorithmBuilder::ModularSimulatorAlgorithmBuilderHelper'], 
625 ········['../classgmx_1_1ModularSimulatorAlgorithmBuilderHelper.xhtml#aa3d736d85f6f1981ff07cca7358ca214',·1,·'gmx::ModularSimulatorAlgorithmBuilderHelper::ModularSimulatorAlgorithmBuilderHelper()']624 ········['../classgmx_1_1ModularSimulatorAlgorithmBuilderHelper.xhtml#aa3d736d85f6f1981ff07cca7358ca214',·1,·'gmx::ModularSimulatorAlgorithmBuilderHelper::ModularSimulatorAlgorithmBuilderHelper()'],
 625 ········['../classgmx_1_1ModularSimulatorAlgorithmBuilderHelper.xhtml',·1,·'gmx::ModularSimulatorAlgorithmBuilderHelper']
626 ····]],626 ····]],
627 ····['modularsimulatorbuilderstate_388',·['ModularSimulatorBuilderState',·['../group__module__modularsimulator.xhtml#gad08aa3cd3fe8d55ab61c5f81c3423a23',·1,·'gmx']]],627 ····['modularsimulatorbuilderstate_388',·['ModularSimulatorBuilderState',·['../group__module__modularsimulator.xhtml#gad08aa3cd3fe8d55ab61c5f81c3423a23',·1,·'gmx']]],
628 ····['modularsimulatorerror_389',·['modularsimulatorerror',·['../classgmx_1_1ModularSimulatorError.xhtml',·1,·'gmx::ModularSimulatorError'],628 ····['modularsimulatorerror_389',·['modularsimulatorerror',·['../classgmx_1_1ModularSimulatorError.xhtml',·1,·'gmx::ModularSimulatorError'],
629 ········['../classgmx_1_1ModularSimulatorError.xhtml#a45029942150151c887264bfd5e79f4ab',·1,·'gmx::ModularSimulatorError::ModularSimulatorError()']629 ········['../classgmx_1_1ModularSimulatorError.xhtml#a45029942150151c887264bfd5e79f4ab',·1,·'gmx::ModularSimulatorError::ModularSimulatorError()']
630 ····]],630 ····]],
631 ····['modularsimulatorinterfaces_2eh_390',·['modularsimulatorinterfaces.h',·['../modularsimulatorinterfaces_8h.xhtml',·1,·'']]],631 ····['modularsimulatorinterfaces_2eh_390',·['modularsimulatorinterfaces.h',·['../modularsimulatorinterfaces_8h.xhtml',·1,·'']]],
632 ····['module_391',·['module',·['../page_awh.xhtml#autotoc_md1',·1,·'Design·of·the·AWH·module'],632 ····['module_391',·['module',·['../page_awh.xhtml#autotoc_md1',·1,·'Design·of·the·AWH·module'],
Offset 665, 21 lines modifiedOffset 665, 21 lines modified
665 ····]],665 ····]],
666 ····['modules_20during_20setup_20and_20simulation_406',·['Callbacks·to·modules·during·setup·and·simulation',·['../page_mdmodules.xhtml#autotoc_md6',·1,·'']]],666 ····['modules_20during_20setup_20and_20simulation_406',·['Callbacks·to·modules·during·setup·and·simulation',·['../page_mdmodules.xhtml#autotoc_md6',·1,·'']]],
667 ····['modules_20for_20simulation_20functionality_407',·['Modules·for·simulation·functionality',·['../group__group__mdrun.xhtml',·1,·'']]],667 ····['modules_20for_20simulation_20functionality_407',·['Modules·for·simulation·functionality',·['../group__group__mdrun.xhtml',·1,·'']]],
668 ····['modules_2ecpp_408',·['modules.cpp',·['../modules_8cpp.xhtml',·1,·'']]],668 ····['modules_2ecpp_408',·['modules.cpp',·['../modules_8cpp.xhtml',·1,·'']]],
669 ····['modules_2eh_409',·['modules.h',·['../modules_8h.xhtml',·1,·'']]],669 ····['modules_2eh_409',·['modules.h',·['../modules_8h.xhtml',·1,·'']]],
670 ····['modules_5f_410',·['modules_',·['../classgmx_1_1CommandLineModuleManager_1_1Impl.xhtml#ac010184f1903b09009d59fb48ec2931c',·1,·'gmx::CommandLineModuleManager::Impl::modules_'],670 ····['modules_5f_410',·['modules_',·['../classgmx_1_1CommandLineModuleManager_1_1Impl.xhtml#ac010184f1903b09009d59fb48ec2931c',·1,·'gmx::CommandLineModuleManager::Impl::modules_'],
671 ········['../classgmx_1_1internal_1_1AnalysisDataStorageImpl.xhtml#abc3ca7c53a4ebc8e5f737d948413342c',·1,·'gmx::internal::AnalysisDataStorageImpl::modules_'],671 ········['../classgmx_1_1internal_1_1AnalysisDataStorageImpl.xhtml#abc3ca7c53a4ebc8e5f737d948413342c',·1,·'gmx::internal::AnalysisDataStorageImpl::modules_'],
672 ········['../classgmx_1_1AbstractAnalysisData_1_1Impl.xhtml#a6aacb7133a2ff045a1f39daebe161b0b',·1,·'gmx::AbstractAnalysisData::Impl::modules_'], 
673 ········['../classgmx_1_1AnalysisDataModuleManager_1_1Impl.xhtml#afd03786124306a1bdfce2c71cf28951b',·1,·'gmx::AnalysisDataModuleManager::Impl::modules_']672 ········['../classgmx_1_1AnalysisDataModuleManager_1_1Impl.xhtml#afd03786124306a1bdfce2c71cf28951b',·1,·'gmx::AnalysisDataModuleManager::Impl::modules_'],
 673 ········['../classgmx_1_1AbstractAnalysisData_1_1Impl.xhtml#a6aacb7133a2ff045a1f39daebe161b0b',·1,·'gmx::AbstractAnalysisData::Impl::modules_']
674 ····]],674 ····]],
675 ····['moduleselection_411',·['ModuleSelection',·['../classgmx_1_1test_1_1ModuleSelection.xhtml',·1,·'gmx::test']]],675 ····['moduleselection_411',·['ModuleSelection',·['../classgmx_1_1test_1_1ModuleSelection.xhtml',·1,·'gmx::test']]],
676 ····['moduletest_412',·['ModuleTest',·['../classgmx_1_1test_1_1ModuleTest.xhtml',·1,·'gmx::test']]],676 ····['moduletest_412',·['ModuleTest',·['../classgmx_1_1test_1_1ModuleTest.xhtml',·1,·'gmx::test']]],
677 ····['moduletest_2ecpp_413',·['moduletest.cpp',·['../programs_2mdrun_2tests_2moduletest_8cpp.xhtml',·1,·'(Global·Namespace)'],677 ····['moduletest_2ecpp_413',·['moduletest.cpp',·['../gromacs_2trajectoryanalysis_2tests_2moduletest_8cpp.xhtml',·1,·'(Global·Namespace)'],
678 ········['../gromacs_2trajectoryanalysis_2tests_2moduletest_8cpp.xhtml',·1,·'(Global·Namespace)']678 ········['../programs_2mdrun_2tests_2moduletest_8cpp.xhtml',·1,·'(Global·Namespace)']
679 ····]],679 ····]],
680 ····['moduletest_2eh_414',·['moduletest.h',·['../programs_2mdrun_2tests_2moduletest_8h.xhtml',·1,·'(Global·Namespace)'],680 ····['moduletest_2eh_414',·['moduletest.h',·['../programs_2mdrun_2tests_2moduletest_8h.xhtml',·1,·'(Global·Namespace)'],
681 ········['../gromacs_2trajectoryanalysis_2tests_2moduletest_8h.xhtml',·1,·'(Global·Namespace)']681 ········['../gromacs_2trajectoryanalysis_2tests_2moduletest_8h.xhtml',·1,·'(Global·Namespace)']
682 ····]],682 ····]],
683 ····['modulitype_415',·['ModuliType',·['../namespacegmx_1_1test_1_1anonymous__namespace_02pmebsplinetest_8cpp_03.xhtml#af2a4e4a45e7dcfe4f5de88beec067d80',·1,·'gmx::test::anonymous_namespace{pmebsplinetest.cpp}']]],683 ····['modulitype_415',·['ModuliType',·['../namespacegmx_1_1test_1_1anonymous__namespace_02pmebsplinetest_8cpp_03.xhtml#af2a4e4a45e7dcfe4f5de88beec067d80',·1,·'gmx::test::anonymous_namespace{pmebsplinetest.cpp}']]],
684 ····['molblockindex_416',·['molblockIndex',·['../structAtomInMolblock.xhtml#a4822ac621491293f8ba51d86d0d65143',·1,·'AtomInMolblock']]],684 ····['molblockindex_416',·['molblockIndex',·['../structAtomInMolblock.xhtml#a4822ac621491293f8ba51d86d0d65143',·1,·'AtomInMolblock']]],
685 ····['molblockindices_417',·['molblockIndices',·['../classgmx__reverse__top__t.xhtml#a615d3a71f69c9ef149da0f9eb3b415b9',·1,·'gmx_reverse_top_t']]],685 ····['molblockindices_417',·['molblockIndices',·['../classgmx__reverse__top__t.xhtml#a615d3a71f69c9ef149da0f9eb3b415b9',·1,·'gmx_reverse_top_t']]],
Offset 693, 19 lines modifiedOffset 693, 19 lines modified
693 ····]],693 ····]],
694 ····['moleculeindexstart_424',·['moleculeIndexStart',·['../structMoleculeBlockIndices.xhtml#a063577a901e606ad2b1834d076230979',·1,·'MoleculeBlockIndices']]],694 ····['moleculeindexstart_424',·['moleculeIndexStart',·['../structMoleculeBlockIndices.xhtml#a063577a901e606ad2b1834d076230979',·1,·'MoleculeBlockIndices']]],
695 ····['moleculeinformation_425',·['MoleculeInformation',·['../structMoleculeInformation.xhtml',·1,·'']]],695 ····['moleculeinformation_425',·['MoleculeInformation',·['../structMoleculeInformation.xhtml',·1,·'']]],
696 ····['moleculepatch_426',·['MoleculePatch',·['../structMoleculePatch.xhtml',·1,·'']]],696 ····['moleculepatch_426',·['MoleculePatch',·['../structMoleculePatch.xhtml',·1,·'']]],
697 ····['moleculepatchdatabase_427',·['MoleculePatchDatabase',·['../structMoleculePatchDatabase.xhtml',·1,·'']]],697 ····['moleculepatchdatabase_427',·['MoleculePatchDatabase',·['../structMoleculePatchDatabase.xhtml',·1,·'']]],
698 ····['moleculepatchtype_428',·['MoleculePatchType',·['../hackblock_8h.xhtml#ab96ef77f5bc6d24fdd272b55f5206016',·1,·'hackblock.h']]],698 ····['moleculepatchtype_428',·['MoleculePatchType',·['../hackblock_8h.xhtml#ab96ef77f5bc6d24fdd272b55f5206016',·1,·'hackblock.h']]],
699 ····['moleculesarewhole_429',·['MoleculesAreWhole',·['../group__module__coordinateio.xhtml#ggae520b2721d9d5166e7c015b2654bd1d9af6ea0d2701a81eb19f537c7c982b2fd8',·1,·'gmx']]],699 ····['moleculesarewhole_429',·['MoleculesAreWhole',·['../group__module__coordinateio.xhtml#ggae520b2721d9d5166e7c015b2654bd1d9af6ea0d2701a81eb19f537c7c982b2fd8',·1,·'gmx']]],
 700 ····['moleculetype_430',·['moleculetype',·['../classAtomProxy.xhtml#a82511a69b9b329f73b3ecaa77c7e5df0',·1,·'AtomProxy::moleculeType()'],
700 ····['moleculetype_430',·['moleculetype',·['../namespacegmx_1_1test_1_1anonymous__namespace_02mshift_8cpp_03.xhtml#ae9b5b921bcb8dd2b97cc0d6a14741216',·1,·'gmx::test::anonymous_namespace{mshift.cpp}::moleculeType()'],701 ········['../namespacegmx_1_1test_1_1anonymous__namespace_02mshift_8cpp_03.xhtml#ae9b5b921bcb8dd2b97cc0d6a14741216',·1,·'gmx::test::anonymous_namespace{mshift.cpp}::moleculeType()'],
701 ········['../structMoleculeType.xhtml',·1,·'MoleculeType'], 
702 ········['../structAtomInMolblock.xhtml#adbd0c382ef27b472f0ad350a0142c809',·1,·'AtomInMolblock::moleculeType'], 
703 ········['../structMolecularTopologyAtomIndices.xhtml#ac033337827f14c4585e4b1ae9eb272e3',·1,·'MolecularTopologyAtomIndices::moleculeType'],702 ········['../structMolecularTopologyAtomIndices.xhtml#ac033337827f14c4585e4b1ae9eb272e3',·1,·'MolecularTopologyAtomIndices::moleculeType'],
704 ········['../classAtomProxy.xhtml#a82511a69b9b329f73b3ecaa77c7e5df0',·1,·'AtomProxy::moleculeType()']703 ········['../structAtomInMolblock.xhtml#adbd0c382ef27b472f0ad350a0142c809',·1,·'AtomInMolblock::moleculeType'],
 704 ········['../structMoleculeType.xhtml',·1,·'MoleculeType']
705 ····]],705 ····]],
706 ····['molname_431',·['molname',·['../structswap__group.xhtml#a1133a26ad7fa6ffc6614b1a50127f47d',·1,·'swap_group']]],706 ····['molname_431',·['molname',·['../structswap__group.xhtml#a1133a26ad7fa6ffc6614b1a50127f47d',·1,·'swap_group']]],
707 ····['mols_432',·['mols',·['../structMoleculeInformation.xhtml#a945c507ad8f991d11901cb3fcce96487',·1,·'MoleculeInformation::mols'],707 ····['mols_432',·['mols',·['../structMoleculeInformation.xhtml#a945c507ad8f991d11901cb3fcce96487',·1,·'MoleculeInformation::mols'],
708 ········['../classgmx_1_1ImdSession_1_1Impl.xhtml#ab3aac1e190ed353a1e717fa5fa60b61a',·1,·'gmx::ImdSession::Impl::mols']708 ········['../classgmx_1_1ImdSession_1_1Impl.xhtml#ab3aac1e190ed353a1e717fa5fa60b61a',·1,·'gmx::ImdSession::Impl::mols']
709 ····]],709 ····]],
710 ····['moltypehasvsite_433',·['moltypeHasVsite',·['../computemultibodycutoffs_8cpp.xhtml#a7759c5f444a2540620bd7aed6b99577a',·1,·'computemultibodycutoffs.cpp']]],710 ····['moltypehasvsite_433',·['moltypeHasVsite',·['../computemultibodycutoffs_8cpp.xhtml#a7759c5f444a2540620bd7aed6b99577a',·1,·'computemultibodycutoffs.cpp']]],
711 ····['momentum_434',·['momentum',·['../structSystemMomentum.xhtml#a12a78f8e5157ad1e319366a2e4bebc1c',·1,·'SystemMomentum']]],711 ····['momentum_434',·['momentum',·['../structSystemMomentum.xhtml#a12a78f8e5157ad1e319366a2e4bebc1c',·1,·'SystemMomentum']]],
Offset 739, 26 lines modifiedOffset 739, 26 lines modified
739 ····['mrcdatamode_460',·['MrcDataMode',·['../namespacegmx.xhtml#a4355a7e0f393d42cbb5b2a47aefea966',·1,·'gmx']]],739 ····['mrcdatamode_460',·['MrcDataMode',·['../namespacegmx.xhtml#a4355a7e0f393d42cbb5b2a47aefea966',·1,·'gmx']]],
740 ····['mrcdatastatistics_461',·['MrcDataStatistics',·['../structgmx_1_1MrcDataStatistics.xhtml',·1,·'gmx']]],740 ····['mrcdatastatistics_461',·['MrcDataStatistics',·['../structgmx_1_1MrcDataStatistics.xhtml',·1,·'gmx']]],
741 ····['mrcdensitymap_2ecpp_462',·['mrcdensitymap.cpp',·['../tests_2mrcdensitymap_8cpp.xhtml',·1,·'(Global·Namespace)'],741 ····['mrcdensitymap_2ecpp_462',·['mrcdensitymap.cpp',·['../tests_2mrcdensitymap_8cpp.xhtml',·1,·'(Global·Namespace)'],
742 ········['../mrcdensitymap_8cpp.xhtml',·1,·'(Global·Namespace)']742 ········['../mrcdensitymap_8cpp.xhtml',·1,·'(Global·Namespace)']
743 ····]],743 ····]],
744 ····['mrcdensitymap_2eh_463',·['mrcdensitymap.h',·['../mrcdensitymap_8h.xhtml',·1,·'']]],744 ····['mrcdensitymap_2eh_463',·['mrcdensitymap.h',·['../mrcdensitymap_8h.xhtml',·1,·'']]],
745 ····['mrcdensitymapheader_464',·['MrcDensityMapHeader',·['../structgmx_1_1MrcDensityMapHeader.xhtml',·1,·'gmx']]],745 ····['mrcdensitymapheader_464',·['MrcDensityMapHeader',·['../structgmx_1_1MrcDensityMapHeader.xhtml',·1,·'gmx']]],
746 ····['mrcdensitymapheader_2ecpp_465',·['mrcdensitymapheader.cpp',·['../tests_2mrcdensitymapheader_8cpp.xhtml',·1,·'(Global·Namespace)'],746 ····['mrcdensitymapheader_2ecpp_465',·['mrcdensitymapheader.cpp',·['../mrcdensitymapheader_8cpp.xhtml',·1,·'(Global·Namespace)'],
747 ········['../mrcdensitymapheader_8cpp.xhtml',·1,·'(Global·Namespace)']747 ········['../tests_2mrcdensitymapheader_8cpp.xhtml',·1,·'(Global·Namespace)']
748 ····]],748 ····]],
749 ····['mrcdensitymapheader_2eh_466',·['mrcdensitymapheader.h',·['../mrcdensitymapheader_8h.xhtml',·1,·'']]],749 ····['mrcdensitymapheader_2eh_466',·['mrcdensitymapheader.h',·['../mrcdensitymapheader_8h.xhtml',·1,·'']]],
750 ····['mrcdensitymapoffloatfromfilereader_467',·['mrcdensitymapoffloatfromfilereader',·['../classgmx_1_1MrcDensityMapOfFloatFromFileReader.xhtml#a5e4d0693919c91334eed2bd9942470bc',·1,·'gmx::MrcDensityMapOfFloatFromFileReader::MrcDensityMapOfFloatFromFileReader()'],750 ····['mrcdensitymapoffloatfromfilereader_467',·['mrcdensitymapoffloatfromfilereader',·['../classgmx_1_1MrcDensityMapOfFloatFromFileReader.xhtml',·1,·'gmx::MrcDensityMapOfFloatFromFileReader'],
751 ········['../classgmx_1_1MrcDensityMapOfFloatFromFileReader.xhtml',·1,·'gmx::MrcDensityMapOfFloatFromFileReader']751 ········['../classgmx_1_1MrcDensityMapOfFloatFromFileReader.xhtml#a5e4d0693919c91334eed2bd9942470bc',·1,·'gmx::MrcDensityMapOfFloatFromFileReader::MrcDensityMapOfFloatFromFileReader()']
752 ····]],752 ····]],
753 ····['mrcdensitymapoffloatreader_468',·['mrcdensitymapoffloatreader',·['../classgmx_1_1MrcDensityMapOfFloatReader.xhtml',·1,·'gmx::MrcDensityMapOfFloatReader'],753 ····['mrcdensitymapoffloatreader_468',·['mrcdensitymapoffloatreader',·['../classgmx_1_1MrcDensityMapOfFloatReader.xhtml',·1,·'gmx::MrcDensityMapOfFloatReader'],
754 ········['../classgmx_1_1MrcDensityMapOfFloatReader.xhtml#aa968d4e30f192514e635552e9492aad8',·1,·'gmx::MrcDensityMapOfFloatReader::MrcDensityMapOfFloatReader()']754 ········['../classgmx_1_1MrcDensityMapOfFloatReader.xhtml#aa968d4e30f192514e635552e9492aad8',·1,·'gmx::MrcDensityMapOfFloatReader::MrcDensityMapOfFloatReader()']
755 ····]],755 ····]],
756 ····['mrcdensitymapoffloatwriter_469',·['mrcdensitymapoffloatwriter',·['../classgmx_1_1MrcDensityMapOfFloatWriter.xhtml#aaed6893c7ae8d1df0d7950d0d22e2d03',·1,·'gmx::MrcDensityMapOfFloatWriter::MrcDensityMapOfFloatWriter()'],756 ····['mrcdensitymapoffloatwriter_469',·['mrcdensitymapoffloatwriter',·['../classgmx_1_1MrcDensityMapOfFloatWriter.xhtml',·1,·'gmx::MrcDensityMapOfFloatWriter'],
757 ········['../classgmx_1_1MrcDensityMapOfFloatWriter.xhtml',·1,·'gmx::MrcDensityMapOfFloatWriter']757 ········['../classgmx_1_1MrcDensityMapOfFloatWriter.xhtml#aaed6893c7ae8d1df0d7950d0d22e2d03',·1,·'gmx::MrcDensityMapOfFloatWriter::MrcDensityMapOfFloatWriter()']
758 ····]],758 ····]],
759 ····['mrcdensityskewdata_470',·['MrcDensitySkewData',·['../structgmx_1_1MrcDensitySkewData.xhtml',·1,·'gmx']]],759 ····['mrcdensityskewdata_470',·['MrcDensitySkewData',·['../structgmx_1_1MrcDensitySkewData.xhtml',·1,·'gmx']]],
760 ····['mrcheaderissane_471',·['mrcHeaderIsSane',·['../namespacegmx.xhtml#ae0952e5f8ebf3384064550e3a74596f2',·1,·'gmx']]],760 ····['mrcheaderissane_471',·['mrcHeaderIsSane',·['../namespacegmx.xhtml#ae0952e5f8ebf3384064550e3a74596f2',·1,·'gmx']]],
761 ····['mrcserializer_2ecpp_472',·['mrcserializer.cpp',·['../tests_2mrcserializer_8cpp.xhtml',·1,·'(Global·Namespace)'],761 ····['mrcserializer_2ecpp_472',·['mrcserializer.cpp',·['../tests_2mrcserializer_8cpp.xhtml',·1,·'(Global·Namespace)'],
762 ········['../mrcserializer_8cpp.xhtml',·1,·'(Global·Namespace)']762 ········['../mrcserializer_8cpp.xhtml',·1,·'(Global·Namespace)']
763 ····]],763 ····]],
764 ····['mrcserializer_2eh_473',·['mrcserializer.h',·['../mrcserializer_8h.xhtml',·1,·'']]],764 ····['mrcserializer_2eh_473',·['mrcserializer.h',·['../mrcserializer_8h.xhtml',·1,·'']]],
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785 ····['mstack_490',·['mstack',·['../structgmx__sel__lexer__t.xhtml#a3e71cb042172f69ab46c052232e40366',·1,·'gmx_sel_lexer_t']]],785 ····['mstack_490',·['mstack',·['../structgmx__sel__lexer__t.xhtml#a3e71cb042172f69ab46c052232e40366',·1,·'gmx_sel_lexer_t']]],
786 ····['mstack_5falloc_491',·['mstack_alloc',·['../structgmx__sel__lexer__t.xhtml#afaa0845d2a641ae5ef0cce5fb34cd8a2',·1,·'gmx_sel_lexer_t']]],786 ····['mstack_5falloc_491',·['mstack_alloc',·['../structgmx__sel__lexer__t.xhtml#afaa0845d2a641ae5ef0cce5fb34cd8a2',·1,·'gmx_sel_lexer_t']]],
787 ····['msvc_5fdiagnostic_5fignore_492',·['MSVC_DIAGNOSTIC_IGNORE',·['../basedefinitions_8h.xhtml#a0ac83d4551a14d1115820c29f3d89927',·1,·'basedefinitions.h']]],787 ····['msvc_5fdiagnostic_5fignore_492',·['MSVC_DIAGNOSTIC_IGNORE',·['../basedefinitions_8h.xhtml#a0ac83d4551a14d1115820c29f3d89927',·1,·'basedefinitions.h']]],
788 ····['msvc_5fdiagnostic_5freset_493',·['MSVC_DIAGNOSTIC_RESET',·['../basedefinitions_8h.xhtml#a145484e76dec4f77f77e8b18abf3ab8b',·1,·'basedefinitions.h']]],788 ····['msvc_5fdiagnostic_5freset_493',·['MSVC_DIAGNOSTIC_RESET',·['../basedefinitions_8h.xhtml#a145484e76dec4f77f77e8b18abf3ab8b',·1,·'basedefinitions.h']]],
789 ····['mtl_5fm_5fb0_494',·['MTL_M_B0',·['../device__management__sycl__intel__device__ids_8cpp.xhtml#a2cbf4ef8d324a75842da95cf157ad662a1d45010b00124bcaf2b2aa713aa0fc0f',·1,·'device_management_sycl_intel_device_ids.cpp']]],789 ····['mtl_5fm_5fb0_494',·['MTL_M_B0',·['../device__management__sycl__intel__device__ids_8cpp.xhtml#a2cbf4ef8d324a75842da95cf157ad662a1d45010b00124bcaf2b2aa713aa0fc0f',·1,·'device_management_sycl_intel_device_ids.cpp']]],
790 ····['mtop_495',·['mtop',·['../classgmx_1_1TopologyInformation.xhtml#abe8dc6e15ced23c2bd5eb9390b29907a',·1,·'gmx::TopologyInformation']]],790 ····['mtop_495',·['mtop',·['../classgmx_1_1TopologyInformation.xhtml#abe8dc6e15ced23c2bd5eb9390b29907a',·1,·'gmx::TopologyInformation']]],
791 ····['mtop_2ecpp_496',·['mtop.cpp',·['../mtop_8cpp.xhtml',·1,·'']]],791 ····['mtop_2ecpp_496',·['mtop.cpp',·['../mtop_8cpp.xhtml',·1,·'']]],
792 ····['mtop_5f_497',·['mtop_',·['../classgmx_1_1test_1_1anonymous__namespace_02energyoutput_8cpp_03_1_1EnergyOutputTest.xhtml#ac8535c69809cd055ef847154b806682e',·1,·'gmx::test::anonymous_namespace{energyoutput.cpp}::EnergyOutputTest::mtop_'], 
793 ········['../classgmx_1_1anonymous__namespace_02updategroups_8cpp_03_1_1UpdateGroupsTest.xhtml#a7816bf2a85619478161c364562cc33f9',·1,·'gmx::anonymous_namespace{updategroups.cpp}::UpdateGroupsTest::mtop_'],792 ····['mtop_5f_497',·['mtop_',·['../classgmx_1_1anonymous__namespace_02updategroups_8cpp_03_1_1UpdateGroupsTest.xhtml#a7816bf2a85619478161c364562cc33f9',·1,·'gmx::anonymous_namespace{updategroups.cpp}::UpdateGroupsTest::mtop_'],
 793 ········['../classgmx_1_1DomainDecompositionBuilder_1_1Impl.xhtml#adc735bbbf174573a484ab34b8392557a',·1,·'gmx::DomainDecompositionBuilder::Impl::mtop_'],
794 ········['../classgmx_1_1LocalTopologyChecker_1_1Impl.xhtml#a9c474892cda88236cdef5067f1ddf8fa',·1,·'gmx::LocalTopologyChecker::Impl::mtop_'],794 ········['../classgmx_1_1LocalTopologyChecker_1_1Impl.xhtml#a9c474892cda88236cdef5067f1ddf8fa',·1,·'gmx::LocalTopologyChecker::Impl::mtop_'],
795 ········['../classgmx_1_1DomainDecompositionBuilder_1_1Impl.xhtml#adc735bbbf174573a484ab34b8392557a',·1,·'gmx::DomainDecompositionBuilder::Impl::mtop_']795 ········['../classgmx_1_1test_1_1anonymous__namespace_02energyoutput_8cpp_03_1_1EnergyOutputTest.xhtml#ac8535c69809cd055ef847154b806682e',·1,·'gmx::test::anonymous_namespace{energyoutput.cpp}::EnergyOutputTest::mtop_']
796 ····]],796 ····]],
797 ····['mtop_5fatomloops_2eh_498',·['mtop_atomloops.h',·['../mtop__atomloops_8h.xhtml',·1,·'']]],797 ····['mtop_5fatomloops_2eh_498',·['mtop_atomloops.h',·['../mtop__atomloops_8h.xhtml',·1,·'']]],
798 ····['mtop_5flookup_2eh_499',·['mtop_lookup.h',·['../mtop__lookup_8h.xhtml',·1,·'']]],798 ····['mtop_5flookup_2eh_499',·['mtop_lookup.h',·['../mtop__lookup_8h.xhtml',·1,·'']]],
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460 ········['../namespacegmx.xhtml#a63cf11bdf7c50436e7a754d50689f362a6adf97f83acf6453d4a6a4b1070f3754',·1,·'gmx::None'],460 ········['../namespacegmx.xhtml#a63cf11bdf7c50436e7a754d50689f362a6adf97f83acf6453d4a6a4b1070f3754',·1,·'gmx::None'],
461 ········['../namespacegmx.xhtml#abab20f57d9df210c6b3f6384c54f7212a6adf97f83acf6453d4a6a4b1070f3754',·1,·'gmx::None'],461 ········['../namespacegmx.xhtml#abab20f57d9df210c6b3f6384c54f7212a6adf97f83acf6453d4a6a4b1070f3754',·1,·'gmx::None'],
462 ········['../namespacegmx.xhtml#aa9e7df55e017bd726d027d65551bbd0ca6adf97f83acf6453d4a6a4b1070f3754',·1,·'gmx::None'],462 ········['../namespacegmx.xhtml#aa9e7df55e017bd726d027d65551bbd0ca6adf97f83acf6453d4a6a4b1070f3754',·1,·'gmx::None'],
463 ········['../namespacegmx.xhtml#a35a656f58d79c7258c8b6e0141bd440ba6adf97f83acf6453d4a6a4b1070f3754',·1,·'gmx::None']463 ········['../namespacegmx.xhtml#a35a656f58d79c7258c8b6e0141bd440ba6adf97f83acf6453d4a6a4b1070f3754',·1,·'gmx::None']
464 ····]],464 ····]],
465 ····['nonexistent_286',·['Nonexistent',·['../device__information_8h.xhtml#a0b85af2bfbb9599409b639e98717c888a4ae5e9809862b352a35922a5bcb1bdf3',·1,·'device_information.h']]],465 ····['nonexistent_286',·['Nonexistent',·['../device__information_8h.xhtml#a0b85af2bfbb9599409b639e98717c888a4ae5e9809862b352a35922a5bcb1bdf3',·1,·'device_information.h']]],
466 ····['nonfunctional_287',·['NonFunctional',·['../device__information_8h.xhtml#a0b85af2bfbb9599409b639e98717c888a836c1376187303303ffb10b26f2a4422',·1,·'device_information.h']]],466 ····['nonfunctional_287',·['NonFunctional',·['../device__information_8h.xhtml#a0b85af2bfbb9599409b639e98717c888a836c1376187303303ffb10b26f2a4422',·1,·'device_information.h']]],
467 ····['nonlinear_288',·['nonlinear',·['../namespacegmx.xhtml#a63cf11bdf7c50436e7a754d50689f362a47e3d35ab4249db25f1467971d8aba21',·1,·'gmx::NonLinear'], 
468 ········['../classgmx_1_1VirtualSitesHandler.xhtml#a9bc9f8f9c0f9558d09bf4b5ed0273e3ba47e3d35ab4249db25f1467971d8aba21',·1,·'gmx::VirtualSitesHandler::NonLinear']467 ····['nonlinear_288',·['nonlinear',·['../classgmx_1_1VirtualSitesHandler.xhtml#a9bc9f8f9c0f9558d09bf4b5ed0273e3ba47e3d35ab4249db25f1467971d8aba21',·1,·'gmx::VirtualSitesHandler::NonLinear'],
 468 ········['../namespacegmx.xhtml#a63cf11bdf7c50436e7a754d50689f362a47e3d35ab4249db25f1467971d8aba21',·1,·'gmx::NonLinear']
469 ····]],469 ····]],
470 ····['nonlocal_289',·['nonlocal',·['../namespacegmx.xhtml#a84de1dccdfb142b80c42b0b19f8c6548aedf6f2af1e5ce85c8f9ff667192169d0',·1,·'gmx::NonLocal'],470 ····['nonlocal_289',·['nonlocal',·['../namespacegmx.xhtml#a84de1dccdfb142b80c42b0b19f8c6548aedf6f2af1e5ce85c8f9ff667192169d0',·1,·'gmx::NonLocal'],
471 ········['../namespacegmx.xhtml#a8593d10460a38e0d418692d63f962521aedf6f2af1e5ce85c8f9ff667192169d0',·1,·'gmx::NonLocal']471 ········['../namespacegmx.xhtml#a8593d10460a38e0d418692d63f962521aedf6f2af1e5ce85c8f9ff667192169d0',·1,·'gmx::NonLocal']
472 ····]],472 ····]],
473 ····['nonlocal_5fdone_290',·['nonlocal_done',·['../structNbnxmGpu.xhtml#a7c7aea1f8edd8460d24b4a36d07f1984',·1,·'NbnxmGpu']]],473 ····['nonlocal_5fdone_290',·['nonlocal_done',·['../structNbnxmGpu.xhtml#a7c7aea1f8edd8460d24b4a36d07f1984',·1,·'NbnxmGpu']]],
474 ····['nooptionaloutput_291',·['NoOptionalOutput',·['../classgmx_1_1test_1_1NoOptionalOutput.xhtml',·1,·'gmx::test']]],474 ····['nooptionaloutput_291',·['NoOptionalOutput',·['../classgmx_1_1test_1_1NoOptionalOutput.xhtml',·1,·'gmx::test']]],
475 ····['nopbcjumps_292',·['NoPBCJumps',·['../group__module__coordinateio.xhtml#ggae520b2721d9d5166e7c015b2654bd1d9a3c9450d09d1b92477398f1a26bbb11bf',·1,·'gmx']]],475 ····['nopbcjumps_292',·['NoPBCJumps',·['../group__module__coordinateio.xhtml#ggae520b2721d9d5166e7c015b2654bd1d9a3c9450d09d1b92477398f1a26bbb11bf',·1,·'gmx']]],
476 ····['norder_293',·['nOrder',·['../classgmx_1_1Lincs.xhtml#a916d6e0a08223001ef38a5b74043ab38',·1,·'gmx::Lincs']]],476 ····['norder_293',·['nOrder',·['../classgmx_1_1Lincs.xhtml#a916d6e0a08223001ef38a5b74043ab38',·1,·'gmx::Lincs']]],
477 ····['norm_294',·['norm',·['../namespacegmx.xhtml#ac4968e669f258a20e94e885b49ef2934',·1,·'gmx::norm()'], 
478 ········['../classgmx_1_1BasicVector.xhtml#aad63bfd2384a9d1f876b925ee95de1dc',·1,·'gmx::BasicVector::norm()'],477 ····['norm_294',·['norm',·['../classgmx_1_1BasicVector.xhtml#aad63bfd2384a9d1f876b925ee95de1dc',·1,·'gmx::BasicVector::norm()'],
 478 ········['../namespacegmx.xhtml#ac4968e669f258a20e94e885b49ef2934',·1,·'gmx::norm(BasicVector&lt;·ValueType·&gt;·v)'],
479 ········['../namespacegmx.xhtml#abfc89b990a48f86125d9437b6050be46',·1,·'gmx::norm(T·*v)']479 ········['../namespacegmx.xhtml#abfc89b990a48f86125d9437b6050be46',·1,·'gmx::norm(T·*v)']
480 ····]],480 ····]],
481 ····['norm2_295',·['norm2',·['../namespacegmx.xhtml#a9e1713a0b402535e1f59ebd7cf4d1b5b',·1,·'gmx::norm2()'],481 ····['norm2_295',·['norm2',·['../namespacegmx.xhtml#a9e1713a0b402535e1f59ebd7cf4d1b5b',·1,·'gmx::norm2()'],
482 ········['../classgmx_1_1BasicVector.xhtml#aac10162bd5e4aeae070a245d55404164',·1,·'gmx::BasicVector::norm2()']482 ········['../classgmx_1_1BasicVector.xhtml#aac10162bd5e4aeae070a245d55404164',·1,·'gmx::BasicVector::norm2()']
483 ····]],483 ····]],
484 ····['norm_5fand_5fscale_5fvectors_296',·['norm_and_scale_vectors',·['../autocorr_8cpp.xhtml#ae225e0667d9a6856ba697f31ecc40ade',·1,·'autocorr.cpp']]],484 ····['norm_5fand_5fscale_5fvectors_296',·['norm_and_scale_vectors',·['../autocorr_8cpp.xhtml#ae225e0667d9a6856ba697f31ecc40ade',·1,·'autocorr.cpp']]],
485 ····['normal_297',·['Normal',·['../device__stream_8h.xhtml#a745c3a25d092600ae45b68d7e73d8319a960b44c579bc2f6818d2daaf9e4c16f0',·1,·'device_stream.h']]],485 ····['normal_297',·['Normal',·['../device__stream_8h.xhtml#a745c3a25d092600ae45b68d7e73d8319a960b44c579bc2f6818d2daaf9e4c16f0',·1,·'device_stream.h']]],
486 ····['normaldistribution_298',·['normaldistribution',·['../classgmx_1_1NormalDistribution.xhtml#a96caccdbb3d6390fcb152f6f6a38a2e1',·1,·'gmx::NormalDistribution::NormalDistribution(result_type·mean=0.0,·result_type·stddev=1.0)'],486 ····['normaldistribution_298',·['normaldistribution',·['../structUmbrellaOptions.xhtml#a473f1363f6af80b169a66c49e0806794',·1,·'UmbrellaOptions::normalDistribution'],
487 ········['../classgmx_1_1NormalDistribution.xhtml#a06215348b437434202cda73d44de8c99',·1,·'gmx::NormalDistribution::NormalDistribution(const·param_type·&amp;param)'],487 ········['../classgmx_1_1NormalDistribution.xhtml#a06215348b437434202cda73d44de8c99',·1,·'gmx::NormalDistribution::NormalDistribution()'],
488 ········['../classgmx_1_1NormalDistribution.xhtml',·1,·'gmx::NormalDistribution&lt;·RealType·&gt;'],488 ········['../classgmx_1_1NormalDistribution.xhtml',·1,·'gmx::NormalDistribution&lt;·RealType·&gt;'],
489 ········['../structUmbrellaOptions.xhtml#a473f1363f6af80b169a66c49e0806794',·1,·'UmbrellaOptions::normalDistribution']489 ········['../classgmx_1_1NormalDistribution.xhtml#a96caccdbb3d6390fcb152f6f6a38a2e1',·1,·'gmx::NormalDistribution::NormalDistribution()']
490 ····]],490 ····]],
491 ····['normaldistribution_2ecpp_299',·['normaldistribution.cpp',·['../normaldistribution_8cpp.xhtml',·1,·'']]],491 ····['normaldistribution_2ecpp_299',·['normaldistribution.cpp',·['../normaldistribution_8cpp.xhtml',·1,·'']]],
492 ····['normaldistribution_2eh_300',·['normaldistribution.h',·['../normaldistribution_8h.xhtml',·1,·'']]],492 ····['normaldistribution_2eh_300',·['normaldistribution.h',·['../normaldistribution_8h.xhtml',·1,·'']]],
493 ····['normalization_301',·['normalization',·['../namespacegmx.xhtml#a35a656f58d79c7258c8b6e0141bd440b',·1,·'gmx::Normalization'], 
494 ········['../group__module__trajectoryanalysis.xhtml#ga8dc818a96d0962c8bcb8f3c080d565c8',·1,·'gmx::analysismodules::anonymous_namespace{rdf.cpp}::Normalization']493 ····['normalization_301',·['normalization',·['../group__module__trajectoryanalysis.xhtml#ga8dc818a96d0962c8bcb8f3c080d565c8',·1,·'gmx::analysismodules::anonymous_namespace{rdf.cpp}::Normalization'],
 494 ········['../namespacegmx.xhtml#a35a656f58d79c7258c8b6e0141bd440b',·1,·'gmx::Normalization']
495 ····]],495 ····]],
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497 ····['normalizationvalue_5f_303',·['normalizationValue_',·['../classgmx_1_1AwhEnergyBlock.xhtml#ad7c3727d885b1c8276f38bcb8d770dd4',·1,·'gmx::AwhEnergyBlock']]],497 ····['normalizationvalue_5f_303',·['normalizationValue_',·['../classgmx_1_1AwhEnergyBlock.xhtml#ad7c3727d885b1c8276f38bcb8d770dd4',·1,·'gmx::AwhEnergyBlock']]],
498 ····['normalize_5facf_304',·['normalize_acf',·['../autocorr_8cpp.xhtml#a415d5aa1ec90e0366c9754df28f3e180',·1,·'autocorr.cpp']]],498 ····['normalize_5facf_304',·['normalize_acf',·['../autocorr_8cpp.xhtml#a415d5aa1ec90e0366c9754df28f3e180',·1,·'autocorr.cpp']]],
499 ····['normalizeblock_305',·['normalizeBlock',·['../namespacegmx.xhtml#a70bac9d01a06d35dc45d86a6bdba4f06',·1,·'gmx']]],499 ····['normalizeblock_305',·['normalizeBlock',·['../namespacegmx.xhtml#a70bac9d01a06d35dc45d86a6bdba4f06',·1,·'gmx']]],
500 ····['normalizedensities_5f_306',·['normalizeDensities_',·['../structgmx_1_1DensityFittingParameters.xhtml#a108b0f7f69ade1010f60a941430e1434',·1,·'gmx::DensityFittingParameters']]],500 ····['normalizedensities_5f_306',·['normalizeDensities_',·['../structgmx_1_1DensityFittingParameters.xhtml#a108b0f7f69ade1010f60a941430e1434',·1,·'gmx::DensityFittingParameters']]],
501 ····['normalizefreeenergyandpmfsum_307',·['normalizefreeenergyandpmfsum',·['../namespacegmx.xhtml#ac1a9213632dd1a11d0ad5eb64eb211cc',·1,·'gmx::normalizeFreeEnergyAndPmfSum()'],501 ····['normalizefreeenergyandpmfsum_307',·['normalizefreeenergyandpmfsum',·['../namespacegmx.xhtml#ac1a9213632dd1a11d0ad5eb64eb211cc',·1,·'gmx::normalizeFreeEnergyAndPmfSum()'],
502 ········['../classgmx_1_1PointState.xhtml#a9734176eb05174d67c84c4f6c1d44a6d',·1,·'gmx::PointState::normalizeFreeEnergyAndPmfSum()']502 ········['../classgmx_1_1PointState.xhtml#a9734176eb05174d67c84c4f6c1d44a6d',·1,·'gmx::PointState::normalizeFreeEnergyAndPmfSum()']
503 ····]],503 ····]],
504 ····['normalizeprobability_308',·['normalizeProbability',·['../classgmx_1_1AbstractAverageHistogram.xhtml#abc1ff464523654b5de9dd88ee7c036b4',·1,·'gmx::AbstractAverageHistogram']]],504 ····['normalizeprobability_308',·['normalizeProbability',·['../classgmx_1_1AbstractAverageHistogram.xhtml#abc1ff464523654b5de9dd88ee7c036b4',·1,·'gmx::AbstractAverageHistogram']]],
505 ····['normalizereferencedensity_309',·['normalizeReferenceDensity',·['../classgmx_1_1anonymous__namespace_02densityfitting_8cpp_03_1_1DensityFittingSimulationParameterSetup.xhtml#aba089e24c17d4a809955ccb7fbcadd74',·1,·'gmx::anonymous_namespace{densityfitting.cpp}::DensityFittingSimulationParameterSetup']]],505 ····['normalizereferencedensity_309',·['normalizeReferenceDensity',·['../classgmx_1_1anonymous__namespace_02densityfitting_8cpp_03_1_1DensityFittingSimulationParameterSetup.xhtml#aba089e24c17d4a809955ccb7fbcadd74',·1,·'gmx::anonymous_namespace{densityfitting.cpp}::DensityFittingSimulationParameterSetup']]],
506 ····['normalizesumpositivevaluestounity_310',·['normalizeSumPositiveValuesToUnity',·['../namespacegmx.xhtml#a327f10cbb6dad34a7a108b93d3f5d4e1',·1,·'gmx']]],506 ····['normalizesumpositivevaluestounity_310',·['normalizeSumPositiveValuesToUnity',·['../namespacegmx.xhtml#a327f10cbb6dad34a7a108b93d3f5d4e1',·1,·'gmx']]],
 507 ····['normalizevalue_311',·['normalizevalue',·['../classgmx_1_1EnumOptionStorage.xhtml#a714ef64c0797beedd1ffe8193b7b35a8',·1,·'gmx::EnumOptionStorage::normalizeValue()'],
507 ····['normalizevalue_311',·['normalizevalue',·['../classgmx_1_1OptionStorageTemplateSimple.xhtml#a7b800b3a96308ce591b6ae34cf5817b6',·1,·'gmx::OptionStorageTemplateSimple::normalizeValue()'],508 ········['../classgmx_1_1OptionStorageTemplateSimple.xhtml#a7b800b3a96308ce591b6ae34cf5817b6',·1,·'gmx::OptionStorageTemplateSimple::normalizeValue()']
508 ········['../classgmx_1_1EnumOptionStorage.xhtml#a714ef64c0797beedd1ffe8193b7b35a8',·1,·'gmx::EnumOptionStorage::normalizeValue()'] 
509 ····]],509 ····]],
 510 ····['normalizevalues_312',·['normalizevalues',·['../classanonymous__namespace_02abstractoptionstorage_8cpp_03_1_1MockOptionStorage.xhtml#a41d05ec823b0c59328fe0272416509cf',·1,·'anonymous_namespace{abstractoptionstorage.cpp}::MockOptionStorage::normalizeValues()'],
510 ····['normalizevalues_312',·['normalizevalues',·['../classgmx_1_1OptionInfo.xhtml#afa99b6a8d6f5e06151d7f3b0f8817cfa',·1,·'gmx::OptionInfo::normalizeValues()'],511 ········['../classgmx_1_1OptionInfo.xhtml#afa99b6a8d6f5e06151d7f3b0f8817cfa',·1,·'gmx::OptionInfo::normalizeValues()'],
 512 ········['../classgmx_1_1AbstractOptionStorage.xhtml#a238bb8bb4773156da77fc2828453773e',·1,·'gmx::AbstractOptionStorage::normalizeValues()'],
511 ········['../classgmx_1_1SelectionOptionStorage.xhtml#acfb88582bb18c5a1876b8299e3097bc3',·1,·'gmx::SelectionOptionStorage::normalizeValues()'],513 ········['../classgmx_1_1SelectionOptionStorage.xhtml#acfb88582bb18c5a1876b8299e3097bc3',·1,·'gmx::SelectionOptionStorage::normalizeValues()'],
512 ········['../classgmx_1_1SelectionFileOptionStorage.xhtml#a3ae5bffb43f83750b8784665cafed6c2',·1,·'gmx::SelectionFileOptionStorage::normalizeValues()'],514 ········['../classgmx_1_1SelectionFileOptionStorage.xhtml#a3ae5bffb43f83750b8784665cafed6c2',·1,·'gmx::SelectionFileOptionStorage::normalizeValues()'],
513 ········['../classanonymous__namespace_02abstractoptionstorage_8cpp_03_1_1MockOptionStorage.xhtml#a41d05ec823b0c59328fe0272416509cf',·1,·'anonymous_namespace{abstractoptionstorage.cpp}::MockOptionStorage::normalizeValues()'], 
514 ········['../classgmx_1_1OptionStorageTemplateSimple.xhtml#a24fb31501a4f2bcc6b4f8f4308b9737c',·1,·'gmx::OptionStorageTemplateSimple::normalizeValues()'],515 ········['../classgmx_1_1OptionStorageTemplateSimple.xhtml#a24fb31501a4f2bcc6b4f8f4308b9737c',·1,·'gmx::OptionStorageTemplateSimple::normalizeValues()']
515 ········['../classgmx_1_1AbstractOptionStorage.xhtml#a238bb8bb4773156da77fc2828453773e',·1,·'gmx::AbstractOptionStorage::normalizeValues()'] 
516 ····]],516 ····]],
517 ····['normalmodes_2ecpp_313',·['normalmodes.cpp',·['../normalmodes_8cpp.xhtml',·1,·'']]],517 ····['normalmodes_2ecpp_313',·['normalmodes.cpp',·['../normalmodes_8cpp.xhtml',·1,·'']]],
518 ····['normalmodestest_314',·['NormalModesTest',·['../classgmx_1_1test_1_1anonymous__namespace_02normalmodes_8cpp_03_1_1NormalModesTest.xhtml',·1,·'gmx::test::anonymous_namespace{normalmodes.cpp}']]],518 ····['normalmodestest_314',·['NormalModesTest',·['../classgmx_1_1test_1_1anonymous__namespace_02normalmodes_8cpp_03_1_1NormalModesTest.xhtml',·1,·'gmx::test::anonymous_namespace{normalmodes.cpp}']]],
519 ····['nosehoover_5fvxi_315',·['nosehoover_vxi',·['../classt__state.xhtml#a349969aa77c689a1aa3d2a3f903ad2b3',·1,·'t_state::nosehoover_vxi'],519 ····['nosehoover_5fvxi_315',·['nosehoover_vxi',·['../classt__state.xhtml#a349969aa77c689a1aa3d2a3f903ad2b3',·1,·'t_state::nosehoover_vxi'],
520 ········['../structgmx_1_1PTCouplingArrays.xhtml#a6af6f95f1d4a30e290f6b724f0a313af',·1,·'gmx::PTCouplingArrays::nosehoover_vxi']520 ········['../structgmx_1_1PTCouplingArrays.xhtml#a6af6f95f1d4a30e290f6b724f0a313af',·1,·'gmx::PTCouplingArrays::nosehoover_vxi']
521 ····]],521 ····]],
522 ····['nosehoover_5fxi_316',·['nosehoover_xi',·['../structgmx_1_1PTCouplingArrays.xhtml#a611790ef9fc3907feed3c81b1c29b1db',·1,·'gmx::PTCouplingArrays::nosehoover_xi'],522 ····['nosehoover_5fxi_316',·['nosehoover_xi',·['../structgmx_1_1PTCouplingArrays.xhtml#a611790ef9fc3907feed3c81b1c29b1db',·1,·'gmx::PTCouplingArrays::nosehoover_xi'],
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7 ····['observableshistory_5fp_5',·['observablesHistory_p',·['../structgmx_1_1SimulatorStateData.xhtml#abb32159644e59e584ee3fb040f7c3f7c',·1,·'gmx::SimulatorStateData']]],7 ····['observableshistory_5fp_5',·['observablesHistory_p',·['../structgmx_1_1SimulatorStateData.xhtml#abb32159644e59e584ee3fb040f7c3f7c',·1,·'gmx::SimulatorStateData']]],
8 ····['observablesreducer_6',·['observablesreducer',·['../structgmx_1_1test_1_1anonymous__namespace_02observablesreducer_8cpp_03_1_1ObservablesReducerIntegrationTest_1_1RankData.xhtml#ac31dd7d96b13afe86a272f2bb3f364ed',·1,·'gmx::test::anonymous_namespace{observablesreducer.cpp}::ObservablesReducerIntegrationTest::RankData::observablesReducer'],8 ····['observablesreducer_6',·['observablesreducer',·['../structgmx_1_1test_1_1anonymous__namespace_02observablesreducer_8cpp_03_1_1ObservablesReducerIntegrationTest_1_1RankData.xhtml#ac31dd7d96b13afe86a272f2bb3f364ed',·1,·'gmx::test::anonymous_namespace{observablesreducer.cpp}::ObservablesReducerIntegrationTest::RankData::observablesReducer'],
9 ········['../classanonymous__namespace_02minimize_8cpp_03_1_1EnergyEvaluator.xhtml#aa056e4b8442549d4385116a2cd504854',·1,·'anonymous_namespace{minimize.cpp}::EnergyEvaluator::observablesReducer'],9 ········['../classanonymous__namespace_02minimize_8cpp_03_1_1EnergyEvaluator.xhtml#aa056e4b8442549d4385116a2cd504854',·1,·'anonymous_namespace{minimize.cpp}::EnergyEvaluator::observablesReducer'],
10 ········['../classgmx_1_1ObservablesReducer.xhtml#ad4573de5d1f9236c267e238f6d0670f3',·1,·'gmx::ObservablesReducer::ObservablesReducer()'],10 ········['../classgmx_1_1ObservablesReducer.xhtml#ad4573de5d1f9236c267e238f6d0670f3',·1,·'gmx::ObservablesReducer::ObservablesReducer()'],
11 ········['../classgmx_1_1ObservablesReducer.xhtml',·1,·'gmx::ObservablesReducer'],11 ········['../classgmx_1_1ObservablesReducer.xhtml',·1,·'gmx::ObservablesReducer'],
12 ········['../classgmx_1_1ObservablesReducer.xhtml#a5da6d3ce3cfa1091b54b98af15dbb5ed',·1,·'gmx::ObservablesReducer::ObservablesReducer()']12 ········['../classgmx_1_1ObservablesReducer.xhtml#a5da6d3ce3cfa1091b54b98af15dbb5ed',·1,·'gmx::ObservablesReducer::ObservablesReducer()']
13 ····]],13 ····]],
14 ····['observablesreducer_2ecpp_7',·['observablesreducer.cpp',·['../tests_2observablesreducer_8cpp.xhtml',·1,·'(Global·Namespace)'],14 ····['observablesreducer_2ecpp_7',·['observablesreducer.cpp',·['../observablesreducer_8cpp.xhtml',·1,·'(Global·Namespace)'],
15 ········['../observablesreducer_8cpp.xhtml',·1,·'(Global·Namespace)']15 ········['../tests_2observablesreducer_8cpp.xhtml',·1,·'(Global·Namespace)']
16 ····]],16 ····]],
17 ····['observablesreducer_2eh_8',·['observablesreducer.h',·['../observablesreducer_8h.xhtml',·1,·'']]],17 ····['observablesreducer_2eh_8',·['observablesreducer.h',·['../observablesreducer_8h.xhtml',·1,·'']]],
18 ····['observablesreducerbuilder_9',·['observablesreducerbuilder',·['../classgmx_1_1ObservablesReducerBuilder.xhtml',·1,·'gmx::ObservablesReducerBuilder'],18 ····['observablesreducerbuilder_9',·['observablesreducerbuilder',·['../classgmx_1_1ObservablesReducerBuilder.xhtml',·1,·'gmx::ObservablesReducerBuilder'],
19 ········['../classgmx_1_1ObservablesReducerBuilder.xhtml#ac66fb4f685b08317f852515b66a2c3a0',·1,·'gmx::ObservablesReducerBuilder::ObservablesReducerBuilder(ObservablesReducerBuilder·&amp;&amp;other)·noexcept'],19 ········['../classgmx_1_1ObservablesReducerBuilder.xhtml#ac66fb4f685b08317f852515b66a2c3a0',·1,·'gmx::ObservablesReducerBuilder::ObservablesReducerBuilder(ObservablesReducerBuilder·&amp;&amp;other)·noexcept'],
20 ········['../classgmx_1_1ObservablesReducerBuilder.xhtml#aa9a26264eb531238952e9467589c9c7f',·1,·'gmx::ObservablesReducerBuilder::ObservablesReducerBuilder()'],20 ········['../classgmx_1_1ObservablesReducerBuilder.xhtml#aa9a26264eb531238952e9467589c9c7f',·1,·'gmx::ObservablesReducerBuilder::ObservablesReducerBuilder()'],
21 ········['../classgmx_1_1ObservablesReducer.xhtml#a0fdbd8496187affcbcb8f6adec07ca6e',·1,·'gmx::ObservablesReducer::ObservablesReducerBuilder']21 ········['../classgmx_1_1ObservablesReducer.xhtml#a0fdbd8496187affcbcb8f6adec07ca6e',·1,·'gmx::ObservablesReducer::ObservablesReducerBuilder']
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63 ····['of_20packed_20j_20clusters_20of_20warps_38',·['of·packed·j·clusters·*·#·of·warps',·['../structNbnxm_1_1gpu__plist.xhtml#autotoc_md108',·1,·'']]],63 ····['of_20packed_20j_20clusters_20of_20warps_38',·['of·packed·j·clusters·*·#·of·warps',·['../structNbnxm_1_1gpu__plist.xhtml#autotoc_md108',·1,·'']]],
64 ····['of_20particles_39',·['Interactions·between·lists·of·particles',·['../group__module__listed__forces.xhtml',·1,·'']]],64 ····['of_20particles_39',·['Interactions·between·lists·of·particles',·['../group__module__listed__forces.xhtml',·1,·'']]],
65 ····['of_20the_20awh_20module_40',·['Design·of·the·AWH·module',·['../page_awh.xhtml#autotoc_md1',·1,·'']]],65 ····['of_20the_20awh_20module_40',·['Design·of·the·AWH·module',·['../page_awh.xhtml#autotoc_md1',·1,·'']]],
66 ····['of_20the_20gromacs_20simd_20module_41',·['Design·of·the·GROMACS·SIMD·module',·['../page_simd.xhtml#autotoc_md57',·1,·'']]],66 ····['of_20the_20gromacs_20simd_20module_41',·['Design·of·the·GROMACS·SIMD·module',·['../page_simd.xhtml#autotoc_md57',·1,·'']]],
67 ····['of_20writing_20new_20coordinate_20files_42',·['Handling·of·writing·new·coordinate·files',·['../group__module__coordinateio.xhtml',·1,·'']]],67 ····['of_20writing_20new_20coordinate_20files_42',·['Handling·of·writing·new·coordinate·files',·['../group__module__coordinateio.xhtml',·1,·'']]],
68 ····['off_43',·['Off',·['../namespacegmx.xhtml#adadf1e691df16814192e634d58c70b5ead15305d7a4e34e02489c74a5ef542f36',·1,·'gmx']]],68 ····['off_43',·['Off',·['../namespacegmx.xhtml#adadf1e691df16814192e634d58c70b5ead15305d7a4e34e02489c74a5ef542f36',·1,·'gmx']]],
69 ····['offset_44',·['offset',·['../group__module__modularsimulator.xhtml#ga725d42d8579eacfbccb9bb358249201d',·1,·'gmx::Offset::Offset()'],69 ····['offset_44',·['offset',·['../group__module__modularsimulator.xhtml#ga725d42d8579eacfbccb9bb358249201d',·1,·'gmx::Offset::Offset()'],
70 ········['../classgmx_1_1accessor__basic.xhtml#ab573621901f685d31c720d3a2786f8e8',·1,·'gmx::accessor_basic::offset()'], 
71 ········['../structgmx_1_1Offset.xhtml',·1,·'gmx::Offset']70 ········['../structgmx_1_1Offset.xhtml',·1,·'gmx::Offset'],
 71 ········['../classgmx_1_1accessor__basic.xhtml#ab573621901f685d31c720d3a2786f8e8',·1,·'gmx::accessor_basic::offset(pointer·p,·ptrdiff_t·i)·const·noexcept']
72 ····]],72 ····]],
73 ····['offset_5fpolicy_45',·['offset_policy',·['../classgmx_1_1accessor__basic.xhtml#a62fbe87c35deee4170f07a4673e009a2',·1,·'gmx::accessor_basic']]],73 ····['offset_5fpolicy_45',·['offset_policy',·['../classgmx_1_1accessor__basic.xhtml#a62fbe87c35deee4170f07a4673e009a2',·1,·'gmx::accessor_basic']]],
74 ····['old_5ff_5find_46',·['old_f_ind',·['../classgmx_1_1ImdSession_1_1Impl.xhtml#aa0f6f922cb7460037606d4caa1bb0aa0',·1,·'gmx::ImdSession::Impl']]],74 ····['old_5ff_5find_46',·['old_f_ind',·['../classgmx_1_1ImdSession_1_1Impl.xhtml#aa0f6f922cb7460037606d4caa1bb0aa0',·1,·'gmx::ImdSession::Impl']]],
75 ····['old_5fforces_47',·['old_forces',·['../classgmx_1_1ImdSession_1_1Impl.xhtml#aca2bee71e3338893fafab79154a7d554',·1,·'gmx::ImdSession::Impl']]],75 ····['old_5fforces_47',·['old_forces',·['../classgmx_1_1ImdSession_1_1Impl.xhtml#aca2bee71e3338893fafab79154a7d554',·1,·'gmx::ImdSession::Impl']]],
76 ····['old_5fnforces_48',·['old_nforces',·['../classgmx_1_1ImdSession_1_1Impl.xhtml#a37d85e5efa25caac606bf237a4ad2caf',·1,·'gmx::ImdSession::Impl']]],76 ····['old_5fnforces_48',·['old_nforces',·['../classgmx_1_1ImdSession_1_1Impl.xhtml#a37d85e5efa25caac606bf237a4ad2caf',·1,·'gmx::ImdSession::Impl']]],
77 ····['older_20approaches_49',·['Other·(older)·approaches',·['../page_modularsimulator.xhtml#autotoc_md44',·1,·'']]],77 ····['older_20approaches_49',·['Other·(older)·approaches',·['../page_modularsimulator.xhtml#autotoc_md44',·1,·'']]],
78 ····['oldval_50',·['oldval',·['../classgmx_1_1AnalysisDataDisplacementModule_1_1Impl.xhtml#a2889f98625e7b90aaf20a8fe1bfc382d',·1,·'gmx::AnalysisDataDisplacementModule::Impl']]],78 ····['oldval_50',·['oldval',·['../classgmx_1_1AnalysisDataDisplacementModule_1_1Impl.xhtml#a2889f98625e7b90aaf20a8fe1bfc382d',·1,·'gmx::AnalysisDataDisplacementModule::Impl']]],
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87 ····['onlyatoms_59',·['onlyAtoms',·['../classgmx_1_1SelectionOption.xhtml#a4846f760b91af13c9d9a2814e4ce1d55',·1,·'gmx::SelectionOption']]],87 ····['onlyatoms_59',·['onlyAtoms',·['../classgmx_1_1SelectionOption.xhtml#a4846f760b91af13c9d9a2814e4ce1d55',·1,·'gmx::SelectionOption']]],
88 ····['onlysortedatoms_60',·['onlySortedAtoms',·['../classgmx_1_1SelectionOption.xhtml#a5e1ee5dcb5e9003de983cc4a1044f000',·1,·'gmx::SelectionOption']]],88 ····['onlysortedatoms_60',·['onlySortedAtoms',·['../classgmx_1_1SelectionOption.xhtml#a5e1ee5dcb5e9003de983cc4a1044f000',·1,·'gmx::SelectionOption']]],
89 ····['onlystatic_61',·['onlyStatic',·['../classgmx_1_1SelectionOption.xhtml#a480cd0c77caa5e76be09d5ca395d534a',·1,·'gmx::SelectionOption']]],89 ····['onlystatic_61',·['onlyStatic',·['../classgmx_1_1SelectionOption.xhtml#a480cd0c77caa5e76be09d5ca395d534a',·1,·'gmx::SelectionOption']]],
90 ····['onstep_62',·['OnStep',·['../namespacegmx.xhtml#adadf1e691df16814192e634d58c70b5ea66c375976a2f0a8ea1b7002a79b6ef8b',·1,·'gmx']]],90 ····['onstep_62',·['OnStep',·['../namespacegmx.xhtml#adadf1e691df16814192e634d58c70b5ea66c375976a2f0a8ea1b7002a79b6ef8b',·1,·'gmx']]],
91 ····['onstepandnext_63',·['OnStepAndNext',·['../namespacegmx.xhtml#adadf1e691df16814192e634d58c70b5ea2b81bec778c7d3f443b1b7afadb3348b',·1,·'gmx']]],91 ····['onstepandnext_63',·['OnStepAndNext',·['../namespacegmx.xhtml#adadf1e691df16814192e634d58c70b5ea2b81bec778c7d3f443b1b7afadb3348b',·1,·'gmx']]],
92 ····['ontestend_64',·['onTestEnd',·['../classgmx_1_1test_1_1internal_1_1TestReferenceDataImpl.xhtml#a00dd48380162ea142ce4d55108cb22b5',·1,·'gmx::test::internal::TestReferenceDataImpl']]],92 ····['ontestend_64',·['onTestEnd',·['../classgmx_1_1test_1_1internal_1_1TestReferenceDataImpl.xhtml#a00dd48380162ea142ce4d55108cb22b5',·1,·'gmx::test::internal::TestReferenceDataImpl']]],
93 ····['ooplace_65',·['ooplace',·['../structgmx__fft__mkl.xhtml#a6063ea9aabe67817e0b64783a944cd44',·1,·'gmx_fft_mkl']]],93 ····['ooplace_65',·['ooplace',·['../structgmx__fft__mkl.xhtml#a6063ea9aabe67817e0b64783a944cd44',·1,·'gmx_fft_mkl']]],
94 ····['open_5fdhdl_66',·['open_dhdl',·['../energyoutput_8cpp.xhtml#ac18143d613e81608c3d21acefd4cd8f0',·1,·'open_dhdl(const·char·*filename,·const·t_inputrec·*ir,·const·gmx_output_env_t·*oenv):&#160;energyoutput.cpp'],94 ····['open_5fdhdl_66',·['open_dhdl',·['../energyoutput_8h.xhtml#ac18143d613e81608c3d21acefd4cd8f0',·1,·'open_dhdl(const·char·*filename,·const·t_inputrec·*ir,·const·gmx_output_env_t·*oenv):&#160;energyoutput.cpp'],
95 ········['../energyoutput_8h.xhtml#ac18143d613e81608c3d21acefd4cd8f0',·1,·'open_dhdl(const·char·*filename,·const·t_inputrec·*ir,·const·gmx_output_env_t·*oenv):&#160;energyoutput.cpp']95 ········['../energyoutput_8cpp.xhtml#ac18143d613e81608c3d21acefd4cd8f0',·1,·'open_dhdl(const·char·*filename,·const·t_inputrec·*ir,·const·gmx_output_env_t·*oenv):&#160;energyoutput.cpp']
96 ····]],96 ····]],
97 ····['open_5fsymtab_67',·['open_symtab',·['../symtab_8cpp.xhtml#ae00fb647f33d0a2ea330b2a3ca8e72c8',·1,·'open_symtab(t_symtab·*symtab):&#160;symtab.cpp'],97 ····['open_5fsymtab_67',·['open_symtab',·['../symtab_8cpp.xhtml#ae00fb647f33d0a2ea330b2a3ca8e72c8',·1,·'open_symtab(t_symtab·*symtab):&#160;symtab.cpp'],
98 ········['../symtab_8h.xhtml#ae00fb647f33d0a2ea330b2a3ca8e72c8',·1,·'open_symtab(t_symtab·*symtab):&#160;symtab.cpp']98 ········['../symtab_8h.xhtml#ae00fb647f33d0a2ea330b2a3ca8e72c8',·1,·'open_symtab(t_symtab·*symtab):&#160;symtab.cpp']
99 ····]],99 ····]],
100 ····['openbeforeforcecomputationcpu_68',·['openBeforeForceComputationCpu',·['../classDDBalanceRegionHandler.xhtml#ae72e0fa2568564942a80aa13c1df6bd1',·1,·'DDBalanceRegionHandler']]],100 ····['openbeforeforcecomputationcpu_68',·['openBeforeForceComputationCpu',·['../classDDBalanceRegionHandler.xhtml#ae72e0fa2568564942a80aa13c1df6bd1',·1,·'DDBalanceRegionHandler']]],
101 ····['openbeforeforcecomputationgpu_69',·['openBeforeForceComputationGpu',·['../classDDBalanceRegionHandler.xhtml#a5314136538ffb7bd39cc970ff054b0ca',·1,·'DDBalanceRegionHandler']]],101 ····['openbeforeforcecomputationgpu_69',·['openBeforeForceComputationGpu',·['../classDDBalanceRegionHandler.xhtml#a5314136538ffb7bd39cc970ff054b0ca',·1,·'DDBalanceRegionHandler']]],
102 ····['openbiasoutputfile_70',·['openBiasOutputFile',·['../classOutputFile.xhtml#a09d9265cd5a6ce74728f9064b6057cf1',·1,·'OutputFile']]],102 ····['openbiasoutputfile_70',·['openBiasOutputFile',·['../classOutputFile.xhtml#a09d9265cd5a6ce74728f9064b6057cf1',·1,·'OutputFile']]],
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545 ········['../classgmx_1_1OptionsAssigner_1_1Impl.xhtml#a292a0c6cfed7148f01a99b95d8f8d7f4',·1,·'gmx::OptionsAssigner::Impl::options_'], 
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547 ········['../classgmx_1_1internal_1_1OptionSectionImpl_1_1Group.xhtml#aa0b581c60a66865d20e59c0b7734729c',·1,·'gmx::internal::OptionSectionImpl::Group::options_']545 ········['../classgmx_1_1internal_1_1OptionSectionImpl_1_1Group.xhtml#aa0b581c60a66865d20e59c0b7734729c',·1,·'gmx::internal::OptionSectionImpl::Group::options_'],
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551 ········['../classgmx_1_1anonymous__namespace_02pargs_8cpp_03_1_1OptionsAdapter.xhtml#a1f9a304d7b9fb1e0ecf1e1241be78a04',·1,·'gmx::anonymous_namespace{pargs.cpp}::OptionsAdapter::OptionsAdapter()']551 ········['../classgmx_1_1anonymous__namespace_02pargs_8cpp_03_1_1OptionsAdapter.xhtml#a1f9a304d7b9fb1e0ecf1e1241be78a04',·1,·'gmx::anonymous_namespace{pargs.cpp}::OptionsAdapter::OptionsAdapter()']
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579 ········['../classgmx_1_1TrajectoryAnalysisModule.xhtml#afa3457cc922f1d16c4c19cec740e0442',·1,·'gmx::TrajectoryAnalysisModule::optionsFinished()'], 
580 ········['../classgmx_1_1SelectionOptionBehavior.xhtml#ac18e2436bac7d70a0a973166150b3683',·1,·'gmx::SelectionOptionBehavior::optionsFinished()'],579 ········['../classgmx_1_1SelectionOptionBehavior.xhtml#ac18e2436bac7d70a0a973166150b3683',·1,·'gmx::SelectionOptionBehavior::optionsFinished()'],
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604 ····]],604 ····]],
605 ····['optionsmodifyingtypevisitor_196',·['OptionsModifyingTypeVisitor',·['../classgmx_1_1OptionsModifyingTypeVisitor.xhtml',·1,·'gmx']]],605 ····['optionsmodifyingtypevisitor_196',·['OptionsModifyingTypeVisitor',·['../classgmx_1_1OptionsModifyingTypeVisitor.xhtml',·1,·'gmx']]],
606 ····['optionsmodifyingtypevisitor_3c_20floatingpointoptioninfo_20_3e_197',·['OptionsModifyingTypeVisitor&lt;·FloatingPointOptionInfo·&gt;',·['../classgmx_1_1OptionsModifyingTypeVisitor.xhtml',·1,·'gmx']]],606 ····['optionsmodifyingtypevisitor_3c_20floatingpointoptioninfo_20_3e_197',·['OptionsModifyingTypeVisitor&lt;·FloatingPointOptionInfo·&gt;',·['../classgmx_1_1OptionsModifyingTypeVisitor.xhtml',·1,·'gmx']]],
607 ····['optionsmodifyingvisitor_198',·['OptionsModifyingVisitor',·['../classgmx_1_1OptionsModifyingVisitor.xhtml',·1,·'gmx']]],607 ····['optionsmodifyingvisitor_198',·['OptionsModifyingVisitor',·['../classgmx_1_1OptionsModifyingVisitor.xhtml',·1,·'gmx']]],
608 ····['optionsmodulesettings_5f_199',·['optionsModuleSettings_',·['../classgmx_1_1TrajectoryAnalysisSettings_1_1Impl.xhtml#aa30802598cfbc0bfa82a65579e47651a',·1,·'gmx::TrajectoryAnalysisSettings::Impl']]],608 ····['optionsmodulesettings_5f_199',·['optionsModuleSettings_',·['../classgmx_1_1TrajectoryAnalysisSettings_1_1Impl.xhtml#aa30802598cfbc0bfa82a65579e47651a',·1,·'gmx::TrajectoryAnalysisSettings::Impl']]],
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610 ········['../classgmx_1_1OptionStorageTemplate.xhtml#a979a7a8f2176df65f7ba26e52e67da6e',·1,·'gmx::OptionStorageTemplate::OptionStorageTemplate(const·OptionTemplate&lt;·T,·U·&gt;·&amp;settings,·OptionFlags·staticFlags=OptionFlags())'],611 ········['../classgmx_1_1OptionStorageTemplate.xhtml#a979a7a8f2176df65f7ba26e52e67da6e',·1,·'gmx::OptionStorageTemplate::OptionStorageTemplate(const·OptionTemplate&lt;·T,·U·&gt;·&amp;settings,·OptionFlags·staticFlags=OptionFlags())']
611 ········['../classgmx_1_1OptionStorageTemplate.xhtml#a141155fc18064e65d14e23f2c26f8b6e',·1,·'gmx::OptionStorageTemplate::OptionStorageTemplate(const·AbstractOption·&amp;settings,·StorePointer·store)'] 
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14 ····['packageidinmachine_4',·['packageIdInMachine',·['../structgmx_1_1CpuInfo_1_1LogicalProcessor.xhtml#a4f9fa92734944301901b1dcd85093254',·1,·'gmx::CpuInfo::LogicalProcessor']]],14 ····['packageidinmachine_4',·['packageIdInMachine',·['../structgmx_1_1CpuInfo_1_1LogicalProcessor.xhtml#a4f9fa92734944301901b1dcd85093254',·1,·'gmx::CpuInfo::LogicalProcessor']]],
15 ····['packagerankintopology_5',·['packageRankInTopology',·['../structgmx_1_1HardwareTopology_1_1LogicalProcessor.xhtml#a1b9ad69ea5aa8aca7f5595c889df2e7c',·1,·'gmx::HardwareTopology::LogicalProcessor']]],15 ····['packagerankintopology_5',·['packageRankInTopology',·['../structgmx_1_1HardwareTopology_1_1LogicalProcessor.xhtml#a1b9ad69ea5aa8aca7f5595c889df2e7c',·1,·'gmx::HardwareTopology::LogicalProcessor']]],
16 ····['packages_6',·['packages',·['../structgmx_1_1HardwareTopology_1_1Machine.xhtml#a74871628a052ed8f5cb82d2d53cd7c97',·1,·'gmx::HardwareTopology::Machine']]],16 ····['packages_6',·['packages',·['../structgmx_1_1HardwareTopology_1_1Machine.xhtml#a74871628a052ed8f5cb82d2d53cd7c97',·1,·'gmx::HardwareTopology::Machine']]],
17 ····['packed_20j_20clusters_20of_20warps_7',·['of·packed·j·clusters·*·#·of·warps',·['../structNbnxm_1_1gpu__plist.xhtml#autotoc_md108',·1,·'']]],17 ····['packed_20j_20clusters_20of_20warps_7',·['of·packed·j·clusters·*·#·of·warps',·['../structNbnxm_1_1gpu__plist.xhtml#autotoc_md108',·1,·'']]],
18 ····['packedboundingboxes_8',·['packedBoundingBoxes',·['../classNbnxm_1_1Grid.xhtml#a353b04469531e9ab020abdd48aa0e351',·1,·'Nbnxm::Grid']]],18 ····['packedboundingboxes_8',·['packedBoundingBoxes',·['../classNbnxm_1_1Grid.xhtml#a353b04469531e9ab020abdd48aa0e351',·1,·'Nbnxm::Grid']]],
19 ····['packedjclusterlist_9',·['PackedJClusterList',·['../classPackedJClusterList.xhtml',·1,·'']]],19 ····['packedjclusterlist_9',·['PackedJClusterList',·['../classPackedJClusterList.xhtml',·1,·'']]],
20 ····['packhaloexternal_10',·['PackHaloExternal',·['../classPackHaloExternal.xhtml',·1,·'']]],20 ····['packhaloexternal_10',·['PackHaloExternal',·['../classPackHaloExternal.xhtml',·1,·'']]],
21 ····['packhalointernal_11',·['PackHaloInternal',·['../classPackHaloInternal.xhtml',·1,·'']]],21 ····['packhalointernal_11',·['PackHaloInternal',·['../classPackHaloInternal.xhtml',·1,·'']]],
22 ····['paddedarrayref_12',·['paddedArrayRef',·['../classgmx_1_1ArrayRefWithPadding.xhtml#af96cdc4e2ae79fc9e3de0a7ac3291b1f',·1,·'gmx::ArrayRefWithPadding']]],22 ····['paddedarrayref_12',·['paddedArrayRef',·['../classgmx_1_1ArrayRefWithPadding.xhtml#af96cdc4e2ae79fc9e3de0a7ac3291b1f',·1,·'gmx::ArrayRefWithPadding']]],
23 ····['paddedconstarrayref_13',·['paddedConstArrayRef',·['../classgmx_1_1ArrayRefWithPadding.xhtml#a3b87c53ddcde85eccd59b62fafc2fec3',·1,·'gmx::ArrayRefWithPadding']]],23 ····['paddedconstarrayref_13',·['paddedConstArrayRef',·['../classgmx_1_1ArrayRefWithPadding.xhtml#a3b87c53ddcde85eccd59b62fafc2fec3',·1,·'gmx::ArrayRefWithPadding']]],
24 ····['paddedhostvector_14',·['paddedhostvector',·['../namespacegmx.xhtml#a5ec47a61b30ffcc249cc27ae5ea47da8',·1,·'gmx::PaddedHostVector'], 
25 ········['../state_8h.xhtml#ac8c51716c19f5f58463e856c19b39acb',·1,·'PaddedHostVector:&#160;state.h']24 ····['paddedhostvector_14',·['paddedhostvector',·['../state_8h.xhtml#ac8c51716c19f5f58463e856c19b39acb',·1,·'PaddedHostVector:&#160;state.h'],
 25 ········['../namespacegmx.xhtml#a5ec47a61b30ffcc249cc27ae5ea47da8',·1,·'gmx::PaddedHostVector']
26 ····]],26 ····]],
27 ····['paddednumatomsincolumn_15',·['paddedNumAtomsInColumn',·['../classNbnxm_1_1Grid.xhtml#a95f443a30f4a01b8cb23197a95e51443',·1,·'Nbnxm::Grid']]],27 ····['paddednumatomsincolumn_15',·['paddedNumAtomsInColumn',·['../classNbnxm_1_1Grid.xhtml#a95f443a30f4a01b8cb23197a95e51443',·1,·'Nbnxm::Grid']]],
28 ····['paddedsize_16',·['paddedSize',·['../classgmx_1_1PaddedVector.xhtml#aa3d1b552af6106d1bb61426b4605add3',·1,·'gmx::PaddedVector']]],28 ····['paddedsize_16',·['paddedSize',·['../classgmx_1_1PaddedVector.xhtml#aa3d1b552af6106d1bb61426b4605add3',·1,·'gmx::PaddedVector']]],
29 ····['paddedvector_17',·['paddedvector',·['../classgmx_1_1PaddedVector.xhtml#aae517037a7e2a04806a72deffe661437',·1,·'gmx::PaddedVector::PaddedVector(std::initializer_list&lt;·value_type·&gt;·const·&amp;il)'], 
30 ········['../classgmx_1_1PaddedVector.xhtml#ae8d292225db685d912d5be8f26d32d2d',·1,·'gmx::PaddedVector::PaddedVector(size_type·count,·const·allocator_type·&amp;allocator=Allocator())'],29 ····['paddedvector_17',·['paddedvector',·['../classgmx_1_1PaddedVector.xhtml#ae8d292225db685d912d5be8f26d32d2d',·1,·'gmx::PaddedVector::PaddedVector(size_type·count,·const·allocator_type·&amp;allocator=Allocator())'],
31 ········['../classgmx_1_1PaddedVector.xhtml',·1,·'gmx::PaddedVector&lt;·T,·Allocator·&gt;'], 
32 ········['../classgmx_1_1PaddedVector.xhtml#ac090f26229cc0e5ca4cf4f70d500dd9e',·1,·'gmx::PaddedVector::PaddedVector(size_type·count,·value_type·const·&amp;v,·const·allocator_type·&amp;allocator=Allocator())'],30 ········['../classgmx_1_1PaddedVector.xhtml#ac090f26229cc0e5ca4cf4f70d500dd9e',·1,·'gmx::PaddedVector::PaddedVector(size_type·count,·value_type·const·&amp;v,·const·allocator_type·&amp;allocator=Allocator())'],
33 ········['../classgmx_1_1PaddedVector.xhtml#a8a5f5975b2207677f1e956060b02c1d2',·1,·'gmx::PaddedVector::PaddedVector(allocator_type·const·&amp;allocator)'],31 ········['../classgmx_1_1PaddedVector.xhtml#a8a5f5975b2207677f1e956060b02c1d2',·1,·'gmx::PaddedVector::PaddedVector(allocator_type·const·&amp;allocator)'],
 32 ········['../classgmx_1_1PaddedVector.xhtml#aae517037a7e2a04806a72deffe661437',·1,·'gmx::PaddedVector::PaddedVector(std::initializer_list&lt;·value_type·&gt;·const·&amp;il)'],
34 ········['../classgmx_1_1PaddedVector.xhtml#a1455b09f0cb0dd2b5f6ff5b092ecea08',·1,·'gmx::PaddedVector::PaddedVector(PaddedVector·const·&amp;o)'],33 ········['../classgmx_1_1PaddedVector.xhtml#a1455b09f0cb0dd2b5f6ff5b092ecea08',·1,·'gmx::PaddedVector::PaddedVector(PaddedVector·const·&amp;o)'],
35 ········['../classgmx_1_1PaddedVector.xhtml#a99f036b6e7ea821ab24604474748c8f6',·1,·'gmx::PaddedVector::PaddedVector(PaddedVector·&amp;&amp;o)·noexcept'],34 ········['../classgmx_1_1PaddedVector.xhtml#a99f036b6e7ea821ab24604474748c8f6',·1,·'gmx::PaddedVector::PaddedVector(PaddedVector·&amp;&amp;o)·noexcept'],
36 ········['../classgmx_1_1PaddedVector.xhtml#af634e58ae15af112df64a6e9f42a5460',·1,·'gmx::PaddedVector::PaddedVector(PaddedVector·&amp;&amp;o,·const·Allocator·&amp;alloc)·noexcept']35 ········['../classgmx_1_1PaddedVector.xhtml#af634e58ae15af112df64a6e9f42a5460',·1,·'gmx::PaddedVector::PaddedVector(PaddedVector·&amp;&amp;o,·const·Allocator·&amp;alloc)·noexcept'],
 36 ········['../classgmx_1_1PaddedVector.xhtml',·1,·'gmx::PaddedVector&lt;·T,·Allocator·&gt;']
37 ····]],37 ····]],
38 ····['paddedvector_2ecpp_18',·['paddedvector.cpp',·['../paddedvector_8cpp.xhtml',·1,·'']]],38 ····['paddedvector_2ecpp_18',·['paddedvector.cpp',·['../paddedvector_8cpp.xhtml',·1,·'']]],
39 ····['paddedvector_2eh_19',·['paddedvector.h',·['../paddedvector_8h.xhtml',·1,·'']]],39 ····['paddedvector_2eh_19',·['paddedvector.h',·['../paddedvector_8h.xhtml',·1,·'']]],
40 ····['paddedvector_3c_20gmx_3a_3abasicvector_20_3e_20',·['PaddedVector&lt;·gmx::BasicVector·&gt;',·['../classgmx_1_1PaddedVector.xhtml',·1,·'gmx']]],40 ····['paddedvector_3c_20gmx_3a_3abasicvector_20_3e_20',·['PaddedVector&lt;·gmx::BasicVector·&gt;',·['../classgmx_1_1PaddedVector.xhtml',·1,·'gmx']]],
41 ····['paddedvector_3c_20real_20_3e_21',·['PaddedVector&lt;·real·&gt;',·['../classgmx_1_1PaddedVector.xhtml',·1,·'gmx']]],41 ····['paddedvector_3c_20real_20_3e_21',·['PaddedVector&lt;·real·&gt;',·['../classgmx_1_1PaddedVector.xhtml',·1,·'gmx']]],
42 ····['paddedvector_3c_20rvec_20_3e_22',·['PaddedVector&lt;·RVec·&gt;',·['../classgmx_1_1PaddedVector.xhtml',·1,·'gmx']]],42 ····['paddedvector_3c_20rvec_20_3e_22',·['PaddedVector&lt;·RVec·&gt;',·['../classgmx_1_1PaddedVector.xhtml',·1,·'gmx']]],
43 ····['paddedvectortest_23',·['PaddedVectorTest',·['../classgmx_1_1test_1_1PaddedVectorTest.xhtml',·1,·'gmx::test']]],43 ····['paddedvectortest_23',·['PaddedVectorTest',·['../classgmx_1_1test_1_1PaddedVectorTest.xhtml',·1,·'gmx::test']]],
Offset 47, 16 lines modifiedOffset 47, 16 lines modified
47 ····['pagealignedallocator_27',·['PageAlignedAllocator',·['../namespacegmx.xhtml#af01c69345463ebb433d1fedfd356b74a',·1,·'gmx']]],47 ····['pagealignedallocator_27',·['PageAlignedAllocator',·['../namespacegmx.xhtml#af01c69345463ebb433d1fedfd356b74a',·1,·'gmx']]],
48 ····['pagesize_28',·['pageSize',·['../namespacegmx.xhtml#a41f63c30185ee31c10a30e46b7d53f9d',·1,·'gmx']]],48 ····['pagesize_28',·['pageSize',·['../namespacegmx.xhtml#a41f63c30185ee31c10a30e46b7d53f9d',·1,·'gmx']]],
49 ····['pair_29',·['pair',·['../structnbnxn__excl__t.xhtml#afc916c53f9b67e8172dc309ddd33a550',·1,·'nbnxn_excl_t::pair'],49 ····['pair_29',·['pair',·['../structnbnxn__excl__t.xhtml#afc916c53f9b67e8172dc309ddd33a550',·1,·'nbnxn_excl_t::pair'],
50 ········['../namespacegmx.xhtml#ad4174b02d2bfb10e8538d4844ecc6f81ad0bd662806a73209a1c6fbe55591fbff',·1,·'gmx::Pair']50 ········['../namespacegmx.xhtml#ad4174b02d2bfb10e8538d4844ecc6f81ad0bd662806a73209a1c6fbe55591fbff',·1,·'gmx::Pair']
51 ····]],51 ····]],
52 ····['pair_20interactions_30',·['Non-bonded·pair·interactions',·['../group__module__nbnxm.xhtml',·1,·'']]],52 ····['pair_20interactions_30',·['Non-bonded·pair·interactions',·['../group__module__nbnxm.xhtml',·1,·'']]],
53 ····['paircountwithincutoff_31',·['pairCountWithinCutoff',·['../namespacegmx.xhtml#a246c6fa4555b021df975ad1b7f7697c2',·1,·'gmx']]],53 ····['paircountwithincutoff_31',·['pairCountWithinCutoff',·['../namespacegmx.xhtml#a246c6fa4555b021df975ad1b7f7697c2',·1,·'gmx']]],
54 ····['pairdist_2ecpp_32',·['pairdist.cpp',·['../tests_2pairdist_8cpp.xhtml',·1,·'(Global·Namespace)'],54 ····['pairdist_2ecpp_32',·['pairdist.cpp',·['../modules_2pairdist_8cpp.xhtml',·1,·'(Global·Namespace)'],
55 ········['../modules_2pairdist_8cpp.xhtml',·1,·'(Global·Namespace)']55 ········['../tests_2pairdist_8cpp.xhtml',·1,·'(Global·Namespace)']
56 ····]],56 ····]],
57 ····['pairdist_2eh_33',·['pairdist.h',·['../pairdist_8h.xhtml',·1,·'']]],57 ····['pairdist_2eh_33',·['pairdist.h',·['../pairdist_8h.xhtml',·1,·'']]],
58 ····['pairdistance_34',·['PairDistance',·['../classgmx_1_1analysismodules_1_1anonymous__namespace_02pairdist_8cpp_03_1_1PairDistance.xhtml',·1,·'gmx::analysismodules::anonymous_namespace{pairdist.cpp}']]],58 ····['pairdistance_34',·['PairDistance',·['../classgmx_1_1analysismodules_1_1anonymous__namespace_02pairdist_8cpp_03_1_1PairDistance.xhtml',·1,·'gmx::analysismodules::anonymous_namespace{pairdist.cpp}']]],
59 ····['pairdistancemoduledata_35',·['pairdistancemoduledata',·['../classgmx_1_1analysismodules_1_1anonymous__namespace_02pairdist_8cpp_03_1_1PairDistanceModuleData.xhtml#aee31955e41d398a1738d90c17b9448d7',·1,·'gmx::analysismodules::anonymous_namespace{pairdist.cpp}::PairDistanceModuleData::PairDistanceModuleData()'],59 ····['pairdistancemoduledata_35',·['pairdistancemoduledata',·['../classgmx_1_1analysismodules_1_1anonymous__namespace_02pairdist_8cpp_03_1_1PairDistanceModuleData.xhtml#aee31955e41d398a1738d90c17b9448d7',·1,·'gmx::analysismodules::anonymous_namespace{pairdist.cpp}::PairDistanceModuleData::PairDistanceModuleData()'],
60 ········['../classgmx_1_1analysismodules_1_1anonymous__namespace_02pairdist_8cpp_03_1_1PairDistanceModuleData.xhtml',·1,·'gmx::analysismodules::anonymous_namespace{pairdist.cpp}::PairDistanceModuleData']60 ········['../classgmx_1_1analysismodules_1_1anonymous__namespace_02pairdist_8cpp_03_1_1PairDistanceModuleData.xhtml',·1,·'gmx::analysismodules::anonymous_namespace{pairdist.cpp}::PairDistanceModuleData']
61 ····]],61 ····]],
62 ····['pairdistancemoduletest_36',·['PairDistanceModuleTest',·['../namespaceanonymous__namespace_02pairdist_8cpp_03.xhtml#a84bed762b296d3484c2acf0c86895c00',·1,·'anonymous_namespace{pairdist.cpp}']]],62 ····['pairdistancemoduletest_36',·['PairDistanceModuleTest',·['../namespaceanonymous__namespace_02pairdist_8cpp_03.xhtml#a84bed762b296d3484c2acf0c86895c00',·1,·'anonymous_namespace{pairdist.cpp}']]],
Offset 84, 53 lines modifiedOffset 84, 53 lines modified
84 ····['pairlistset_2ecpp_51',·['pairlistset.cpp',·['../pairlistset_8cpp.xhtml',·1,·'']]],84 ····['pairlistset_2ecpp_51',·['pairlistset.cpp',·['../pairlistset_8cpp.xhtml',·1,·'']]],
85 ····['pairlistset_2eh_52',·['pairlistset.h',·['../pairlistset_8h.xhtml',·1,·'']]],85 ····['pairlistset_2eh_52',·['pairlistset.h',·['../pairlistset_8h.xhtml',·1,·'']]],
86 ····['pairlistsets_53',·['pairlistsets',·['../classPairlistSets.xhtml',·1,·'PairlistSets'],86 ····['pairlistsets_53',·['pairlistsets',·['../classPairlistSets.xhtml',·1,·'PairlistSets'],
87 ········['../classPairlistSets.xhtml#aff659b5683c9ee577e14d59d00d54633',·1,·'PairlistSets::PairlistSets()'],87 ········['../classPairlistSets.xhtml#aff659b5683c9ee577e14d59d00d54633',·1,·'PairlistSets::PairlistSets()'],
88 ········['../structnonbonded__verlet__t.xhtml#aa57ad98496e4e60d07e2f2ef32dd483d',·1,·'nonbonded_verlet_t::pairlistSets()']88 ········['../structnonbonded__verlet__t.xhtml#aa57ad98496e4e60d07e2f2ef32dd483d',·1,·'nonbonded_verlet_t::pairlistSets()']
89 ····]],89 ····]],
90 ····['pairlistsets_2eh_54',·['pairlistsets.h',·['../pairlistsets_8h.xhtml',·1,·'']]],90 ····['pairlistsets_2eh_54',·['pairlistsets.h',·['../pairlistsets_8h.xhtml',·1,·'']]],
 91 ····['pairlisttype_55',·['pairlisttype',·['../structPairlistParams.xhtml#a75f3a17ab82a7f2507529b6f178a57ef',·1,·'PairlistParams::pairlistType'],
91 ····['pairlisttype_55',·['pairlisttype',·['../pairlistparams_8h.xhtml#a624e06b7bd2338b346b59aba9650f6d0',·1,·'PairlistType:&#160;pairlistparams.h'],92 ········['../pairlistparams_8h.xhtml#a624e06b7bd2338b346b59aba9650f6d0',·1,·'PairlistType:&#160;pairlistparams.h']
92 ········['../structPairlistParams.xhtml#a75f3a17ab82a7f2507529b6f178a57ef',·1,·'PairlistParams::pairlistType'] 
93 ····]],93 ····]],
94 ····['pairlistwork_2ecpp_56',·['pairlistwork.cpp',·['../pairlistwork_8cpp.xhtml',·1,·'']]],94 ····['pairlistwork_2ecpp_56',·['pairlistwork.cpp',·['../pairlistwork_8cpp.xhtml',·1,·'']]],
95 ····['pairlistwork_2eh_57',·['pairlistwork.h',·['../pairlistwork_8h.xhtml',·1,·'']]],95 ····['pairlistwork_2eh_57',·['pairlistwork.h',·['../pairlistwork_8h.xhtml',·1,·'']]],
96 ····['pairs_58',·['Pairs',·['../classListedForces.xhtml#a73e4fa54dfd332da42036d5ae893da47aa07a589a90362b3346324844a3ad87ff',·1,·'ListedForces']]],96 ····['pairs_58',·['Pairs',·['../classListedForces.xhtml#a73e4fa54dfd332da42036d5ae893da47aa07a589a90362b3346324844a3ad87ff',·1,·'ListedForces']]],
97 ····['pairs_2ecpp_59',·['pairs.cpp',·['../tests_2pairs_8cpp.xhtml',·1,·'(Global·Namespace)'],97 ····['pairs_2ecpp_59',·['pairs.cpp',·['../pairs_8cpp.xhtml',·1,·'(Global·Namespace)'],
98 ········['../pairs_8cpp.xhtml',·1,·'(Global·Namespace)']98 ········['../tests_2pairs_8cpp.xhtml',·1,·'(Global·Namespace)']
99 ····]],99 ····]],
100 ····['pairs_2eh_60',·['pairs.h',·['../pairs_8h.xhtml',·1,·'']]],100 ····['pairs_2eh_60',·['pairs.h',·['../pairs_8h.xhtml',·1,·'']]],
 101 ····['pairsearch_61',·['pairsearch',·['../classPairSearch.xhtml',·1,·'PairSearch'],
101 ····['pairsearch_61',·['pairsearch',·['../classPairSearch.xhtml#a65dadfe6bac46af5c17defee9a328a28',·1,·'PairSearch::PairSearch()'],102 ········['../classPairSearch.xhtml#a65dadfe6bac46af5c17defee9a328a28',·1,·'PairSearch::PairSearch()']
102 ········['../classPairSearch.xhtml',·1,·'PairSearch'] 
103 ····]],103 ····]],
104 ····['pairsearch_2ecpp_62',·['pairsearch.cpp',·['../pairsearch_8cpp.xhtml',·1,·'']]],104 ····['pairsearch_2ecpp_62',·['pairsearch.cpp',·['../pairsearch_8cpp.xhtml',·1,·'']]],
105 ····['pairsearch_2eh_63',·['pairsearch.h',·['../pairsearch_8h.xhtml',·1,·'']]],105 ····['pairsearch_2eh_63',·['pairsearch.h',·['../pairsearch_8h.xhtml',·1,·'']]],
106 ····['pairsearchcoordinates_64',·['pairSearchCoordinates',·['../classanonymous__namespace_02minimize_8cpp_03_1_1EnergyEvaluator.xhtml#af18643a5c0d8729b32e688d45fd7f8ca',·1,·'anonymous_namespace{minimize.cpp}::EnergyEvaluator']]],106 ····['pairsearchcoordinates_64',·['pairSearchCoordinates',·['../classanonymous__namespace_02minimize_8cpp_03_1_1EnergyEvaluator.xhtml#af18643a5c0d8729b32e688d45fd7f8ca',·1,·'anonymous_namespace{minimize.cpp}::EnergyEvaluator']]],
107 ····['pairsearchwork_65',·['PairsearchWork',·['../structPairsearchWork.xhtml',·1,·'']]],107 ····['pairsearchwork_65',·['PairsearchWork',·['../structPairsearchWork.xhtml',·1,·'']]],
108 ····['paragraphbreak_66',·['paragraphBreak',·['../classgmx_1_1HelpWriterContext.xhtml#a6c24ca1470b3addda69ae236a6ea66b2',·1,·'gmx::HelpWriterContext']]],108 ····['paragraphbreak_66',·['paragraphBreak',·['../classgmx_1_1HelpWriterContext.xhtml#a6c24ca1470b3addda69ae236a6ea66b2',·1,·'gmx::HelpWriterContext']]],
109 ····['parallel_5f3dfft_5fexecute_5fgpu_5fwrapper_67',·['parallel_3dfft_execute_gpu_wrapper',·['../pme__gpu_8cpp.xhtml#a13b15b5d3a7003ff0dfdba02aadbc97e',·1,·'pme_gpu.cpp']]],109 ····['parallel_5f3dfft_5fexecute_5fgpu_5fwrapper_67',·['parallel_3dfft_execute_gpu_wrapper',·['../pme__gpu_8cpp.xhtml#a13b15b5d3a7003ff0dfdba02aadbc97e',·1,·'pme_gpu.cpp']]],
110 ····['parallelconsistencyerror_68',·['parallelconsistencyerror',·['../classgmx_1_1ParallelConsistencyError.xhtml#a30850fa25d3059fa861607dd0eb20bd2',·1,·'gmx::ParallelConsistencyError::ParallelConsistencyError()'],110 ····['parallelconsistencyerror_68',·['parallelconsistencyerror',·['../classgmx_1_1ParallelConsistencyError.xhtml#a30850fa25d3059fa861607dd0eb20bd2',·1,·'gmx::ParallelConsistencyError::ParallelConsistencyError()'],
111 ········['../classgmx_1_1ParallelConsistencyError.xhtml',·1,·'gmx::ParallelConsistencyError']111 ········['../classgmx_1_1ParallelConsistencyError.xhtml',·1,·'gmx::ParallelConsistencyError']
112 ····]],112 ····]],
113 ····['paralleldatastarted_69',·['paralleldatastarted',·['../classgmx_1_1IAnalysisDataModule.xhtml#aeca0c095b7f31aec0f58643bed0e0895',·1,·'gmx::IAnalysisDataModule::parallelDataStarted()'],113 ····['paralleldatastarted_69',·['paralleldatastarted',·['../classgmx_1_1AnalysisDataSimpleHistogramModule.xhtml#a3d06d76f51b9e41e945a997b21efd392',·1,·'gmx::AnalysisDataSimpleHistogramModule::parallelDataStarted()'],
114 ········['../classgmx_1_1AnalysisDataProxy.xhtml#af4720264b81a508876c8e21731585ab0',·1,·'gmx::AnalysisDataProxy::parallelDataStarted()'], 
115 ········['../classgmx_1_1AnalysisDataWeightedHistogramModule.xhtml#aef9b177d826d8afe625be7056ef2c607',·1,·'gmx::AnalysisDataWeightedHistogramModule::parallelDataStarted()'],114 ········['../classgmx_1_1AnalysisDataWeightedHistogramModule.xhtml#aef9b177d826d8afe625be7056ef2c607',·1,·'gmx::AnalysisDataWeightedHistogramModule::parallelDataStarted()'],
116 ········['../classgmx_1_1AnalysisDataSimpleHistogramModule.xhtml#a3d06d76f51b9e41e945a997b21efd392',·1,·'gmx::AnalysisDataSimpleHistogramModule::parallelDataStarted()'], 
117 ········['../classgmx_1_1AnalysisDataModuleParallel.xhtml#ae58dd25d11bc02bd4af8b7f36df62edf',·1,·'gmx::AnalysisDataModuleParallel::parallelDataStarted()']115 ········['../classgmx_1_1AnalysisDataModuleParallel.xhtml#ae58dd25d11bc02bd4af8b7f36df62edf',·1,·'gmx::AnalysisDataModuleParallel::parallelDataStarted()'],
 116 ········['../classgmx_1_1IAnalysisDataModule.xhtml#aeca0c095b7f31aec0f58643bed0e0895',·1,·'gmx::IAnalysisDataModule::parallelDataStarted()'],
 117 ········['../classgmx_1_1AnalysisDataProxy.xhtml#af4720264b81a508876c8e21731585ab0',·1,·'gmx::AnalysisDataProxy::parallelDataStarted()']
118 ····]],118 ····]],
119 ····['parallelizable_20handling_20of_20output_20data_20analysisdata_70',·['Parallelizable·Handling·of·Output·Data·(analysisdata)',·['../group__module__analysisdata.xhtml',·1,·'']]],119 ····['parallelizable_20handling_20of_20output_20data_20analysisdata_70',·['Parallelizable·Handling·of·Output·Data·(analysisdata)',·['../group__module__analysisdata.xhtml',·1,·'']]],
120 ····['parallelization_71',·['Parallelization',·['../page_analysisdata.xhtml#section_analysisdata_parallelization',·1,·'']]],120 ····['parallelization_71',·['Parallelization',·['../page_analysisdata.xhtml#section_analysisdata_parallelization',·1,·'']]],
121 ····['parallelization_20over_20mpi_72',·['Spatial·domain·decomposition·(for·parallelization·over·MPI)',·['../group__module__domdec.xhtml',·1,·'']]],121 ····['parallelization_20over_20mpi_72',·['Spatial·domain·decomposition·(for·parallelization·over·MPI)',·['../group__module__domdec.xhtml',·1,·'']]],
122 ····['parallelizationfactor_73',·['parallelizationFactor',·['../classgmx_1_1AnalysisDataParallelOptions.xhtml#ad581353e29513839c7ab04f429f50b61',·1,·'gmx::AnalysisDataParallelOptions']]],122 ····['parallelizationfactor_73',·['parallelizationFactor',·['../classgmx_1_1AnalysisDataParallelOptions.xhtml#ad581353e29513839c7ab04f429f50b61',·1,·'gmx::AnalysisDataParallelOptions']]],
123 ····['paralleloptions_2eh_74',·['paralleloptions.h',·['../paralleloptions_8h.xhtml',·1,·'']]],123 ····['paralleloptions_2eh_74',·['paralleloptions.h',·['../paralleloptions_8h.xhtml',·1,·'']]],
124 ····['parallelselection_75',·['parallelSelection',·['../classgmx_1_1TrajectoryAnalysisModuleData.xhtml#a4e23dbf4cfd2554ac011664b49c1c7e0',·1,·'gmx::TrajectoryAnalysisModuleData']]],124 ····['parallelselection_75',·['parallelSelection',·['../classgmx_1_1TrajectoryAnalysisModuleData.xhtml#a4e23dbf4cfd2554ac011664b49c1c7e0',·1,·'gmx::TrajectoryAnalysisModuleData']]],
125 ····['parallelselections_76',·['parallelSelections',·['../classgmx_1_1TrajectoryAnalysisModuleData.xhtml#a4ffe3dec6ef34ae7e6af7a46b9fc7d0b',·1,·'gmx::TrajectoryAnalysisModuleData']]],125 ····['parallelselections_76',·['parallelSelections',·['../classgmx_1_1TrajectoryAnalysisModuleData.xhtml#a4ffe3dec6ef34ae7e6af7a46b9fc7d0b',·1,·'gmx::TrajectoryAnalysisModuleData']]],
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126 ····['param_77',·['param',·['../classgmx_1_1UniformRealDistribution.xhtml#a267faab6d4cd2e017603fe0f73500c38',·1,·'gmx::UniformRealDistribution::param()'],127 ········['../classgmx_1_1UniformRealDistribution.xhtml#a267faab6d4cd2e017603fe0f73500c38',·1,·'gmx::UniformRealDistribution::param()'],
127 ········['../classgmx_1_1TabulatedNormalDistribution.xhtml#ace6c727298fe514a14a114f41d00e206',·1,·'gmx::TabulatedNormalDistribution::param()'],128 ········['../classgmx_1_1TabulatedNormalDistribution.xhtml#ace6c727298fe514a14a114f41d00e206',·1,·'gmx::TabulatedNormalDistribution::param()'],
128 ········['../classgmx_1_1UniformIntDistribution.xhtml#a843c35d5997b5075c35125a57cd6b937',·1,·'gmx::UniformIntDistribution::param()'],129 ········['../classgmx_1_1UniformIntDistribution.xhtml#a843c35d5997b5075c35125a57cd6b937',·1,·'gmx::UniformIntDistribution::param()'],
129 ········['../classgmx_1_1NormalDistribution.xhtml#adaa8c7d5f4803f33e80d1811aa0af1f8',·1,·'gmx::NormalDistribution::param()'], 
130 ········['../classgmx_1_1GammaDistribution.xhtml#a35f0e16a9da71056786953c5095ae334',·1,·'gmx::GammaDistribution::param()'],130 ········['../classgmx_1_1GammaDistribution.xhtml#a35f0e16a9da71056786953c5095ae334',·1,·'gmx::GammaDistribution::param()'],
131 ········['../classgmx_1_1SelectionTreeElement.xhtml#a0b4956164b6ed61094a550099fa90d3b',·1,·'gmx::SelectionTreeElement::param'],131 ········['../classgmx_1_1SelectionTreeElement.xhtml#a0b4956164b6ed61094a550099fa90d3b',·1,·'gmx::SelectionTreeElement::param'],
132 ········['../structgmx__ana__selmethod__t.xhtml#afd48ccc940b2c37d46c65bbeb5fb7ff3',·1,·'gmx_ana_selmethod_t::param'],132 ········['../structgmx__ana__selmethod__t.xhtml#afd48ccc940b2c37d46c65bbeb5fb7ff3',·1,·'gmx_ana_selmethod_t::param'],
133 ········['../classgmx_1_1ExponentialDistribution.xhtml#ac5071065401d78716721b2d8512b9f75',·1,·'gmx::ExponentialDistribution::param()·const']133 ········['../classgmx_1_1ExponentialDistribution.xhtml#ac5071065401d78716721b2d8512b9f75',·1,·'gmx::ExponentialDistribution::param()·const']
134 ····]],134 ····]],
135 ····['param_5ftype_78',·['param_type',·['../classgmx_1_1ExponentialDistribution_1_1param__type.xhtml',·1,·'gmx::ExponentialDistribution&lt;·RealType·&gt;::param_type'],135 ····['param_5ftype_78',·['param_type',·['../classgmx_1_1ExponentialDistribution_1_1param__type.xhtml',·1,·'gmx::ExponentialDistribution&lt;·RealType·&gt;::param_type'],
136 ········['../classgmx_1_1GammaDistribution_1_1param__type.xhtml',·1,·'gmx::GammaDistribution&lt;·RealType·&gt;::param_type'],136 ········['../classgmx_1_1GammaDistribution_1_1param__type.xhtml',·1,·'gmx::GammaDistribution&lt;·RealType·&gt;::param_type'],
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396 ····['pmalloc_2ecpp_241',·['pmalloc.cpp',·['../pmalloc_8cpp.xhtml',·1,·'']]],396 ····['pmalloc_2ecpp_241',·['pmalloc.cpp',·['../pmalloc_8cpp.xhtml',·1,·'']]],
397 ····['pmalloc_2eh_242',·['pmalloc.h',·['../pmalloc_8h.xhtml',·1,·'']]],397 ····['pmalloc_2eh_242',·['pmalloc.h',·['../pmalloc_8h.xhtml',·1,·'']]],
398 ····['pmalloc_5fsycl_2ecpp_243',·['pmalloc_sycl.cpp',·['../pmalloc__sycl_8cpp.xhtml',·1,·'']]],398 ····['pmalloc_5fsycl_2ecpp_243',·['pmalloc_sycl.cpp',·['../pmalloc__sycl_8cpp.xhtml',·1,·'']]],
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28 ····]],28 ····]],
29 ····['qmmmforceprovider_2eh_17',·['qmmmforceprovider.h',·['../qmmmforceprovider_8h.xhtml',·1,·'']]],29 ····['qmmmforceprovider_2eh_17',·['qmmmforceprovider.h',·['../qmmmforceprovider_8h.xhtml',·1,·'']]],
30 ····['qmmmforceprovider_5fstub_2ecpp_18',·['qmmmforceprovider_stub.cpp',·['../qmmmforceprovider__stub_8cpp.xhtml',·1,·'']]],30 ····['qmmmforceprovider_5fstub_2ecpp_18',·['qmmmforceprovider_stub.cpp',·['../qmmmforceprovider__stub_8cpp.xhtml',·1,·'']]],
31 ····['qmmminputgenerator_19',·['qmmminputgenerator',·['../classgmx_1_1QMMMInputGenerator.xhtml#aa0847e6ee608ea7444b36c9db6e0bdd6',·1,·'gmx::QMMMInputGenerator::QMMMInputGenerator()'],31 ····['qmmminputgenerator_19',·['qmmminputgenerator',·['../classgmx_1_1QMMMInputGenerator.xhtml#aa0847e6ee608ea7444b36c9db6e0bdd6',·1,·'gmx::QMMMInputGenerator::QMMMInputGenerator()'],
32 ········['../classgmx_1_1QMMMInputGenerator.xhtml',·1,·'gmx::QMMMInputGenerator']32 ········['../classgmx_1_1QMMMInputGenerator.xhtml',·1,·'gmx::QMMMInputGenerator']
33 ····]],33 ····]],
34 ····['qmmminputgenerator_2ecpp_20',·['qmmminputgenerator.cpp',·['../tests_2qmmminputgenerator_8cpp.xhtml',·1,·'(Global·Namespace)'],34 ····['qmmminputgenerator_2ecpp_20',·['qmmminputgenerator.cpp',·['../qmmminputgenerator_8cpp.xhtml',·1,·'(Global·Namespace)'],
35 ········['../qmmminputgenerator_8cpp.xhtml',·1,·'(Global·Namespace)']35 ········['../tests_2qmmminputgenerator_8cpp.xhtml',·1,·'(Global·Namespace)']
36 ····]],36 ····]],
37 ····['qmmminputgenerator_2eh_21',·['qmmminputgenerator.h',·['../qmmminputgenerator_8h.xhtml',·1,·'']]],37 ····['qmmminputgenerator_2eh_21',·['qmmminputgenerator.h',·['../qmmminputgenerator_8h.xhtml',·1,·'']]],
38 ····['qmmmmdptransformfromstring_22',·['QMMMMdpTransformFromString',·['../namespacegmx_1_1anonymous__namespace_02qmmmoptions_8cpp_03.xhtml#a704afcf71de3ae29cf3c3a260c8e8e0c',·1,·'gmx::anonymous_namespace{qmmmoptions.cpp}']]],38 ····['qmmmmdptransformfromstring_22',·['QMMMMdpTransformFromString',·['../namespacegmx_1_1anonymous__namespace_02qmmmoptions_8cpp_03.xhtml#a704afcf71de3ae29cf3c3a260c8e8e0c',·1,·'gmx::anonymous_namespace{qmmmoptions.cpp}']]],
39 ····['qmmmmoduleinfo_23',·['QMMMModuleInfo',·['../structgmx_1_1QMMMModuleInfo.xhtml',·1,·'gmx']]],39 ····['qmmmmoduleinfo_23',·['QMMMModuleInfo',·['../structgmx_1_1QMMMModuleInfo.xhtml',·1,·'gmx']]],
40 ····['qmmmoptions_24',·['QMMMOptions',·['../classgmx_1_1QMMMOptions.xhtml',·1,·'gmx']]],40 ····['qmmmoptions_24',·['QMMMOptions',·['../classgmx_1_1QMMMOptions.xhtml',·1,·'gmx']]],
41 ····['qmmmoptions_2ecpp_25',·['qmmmoptions.cpp',·['../tests_2qmmmoptions_8cpp.xhtml',·1,·'(Global·Namespace)'],41 ····['qmmmoptions_2ecpp_25',·['qmmmoptions.cpp',·['../tests_2qmmmoptions_8cpp.xhtml',·1,·'(Global·Namespace)'],
42 ········['../qmmmoptions_8cpp.xhtml',·1,·'(Global·Namespace)']42 ········['../qmmmoptions_8cpp.xhtml',·1,·'(Global·Namespace)']
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85 ····]],85 ····]],
86 ····['rcp_50',·['rcp',·['../group__module__simd.xhtml#ga48cb29271cf7ac44a06cfe20e5c29dc2',·1,·'gmx::rcp(SimdFloat·x)'],86 ····['rcp_50',·['rcp',·['../group__module__simd.xhtml#ga48cb29271cf7ac44a06cfe20e5c29dc2',·1,·'gmx::rcp(SimdFloat·x)'],
87 ········['../group__module__simd.xhtml#ga4c2c3eae5c42d898373ec6e90dd99064',·1,·'gmx::rcp(SimdDouble·x)']87 ········['../group__module__simd.xhtml#ga4c2c3eae5c42d898373ec6e90dd99064',·1,·'gmx::rcp(SimdDouble·x)']
88 ····]],88 ····]],
89 ····['rcut_5fcoulomb_51',·['rcut_coulomb',·['../structpme__setup__t.xhtml#a10b26bc4762a645db835d9e55df7324c',·1,·'pme_setup_t']]],89 ····['rcut_5fcoulomb_51',·['rcut_coulomb',·['../structpme__setup__t.xhtml#a10b26bc4762a645db835d9e55df7324c',·1,·'pme_setup_t']]],
90 ····['rdf_52',·['Rdf',·['../classgmx_1_1analysismodules_1_1anonymous__namespace_02rdf_8cpp_03_1_1Rdf.xhtml',·1,·'gmx::analysismodules::anonymous_namespace{rdf.cpp}']]],90 ····['rdf_52',·['Rdf',·['../classgmx_1_1analysismodules_1_1anonymous__namespace_02rdf_8cpp_03_1_1Rdf.xhtml',·1,·'gmx::analysismodules::anonymous_namespace{rdf.cpp}']]],
91 ····['rdf_2ecpp_53',·['rdf.cpp',·['../modules_2rdf_8cpp.xhtml',·1,·'(Global·Namespace)'],91 ····['rdf_2ecpp_53',·['rdf.cpp',·['../tests_2rdf_8cpp.xhtml',·1,·'(Global·Namespace)'],
92 ········['../tests_2rdf_8cpp.xhtml',·1,·'(Global·Namespace)']92 ········['../modules_2rdf_8cpp.xhtml',·1,·'(Global·Namespace)']
93 ····]],93 ····]],
94 ····['rdf_2eh_54',·['rdf.h',·['../rdf_8h.xhtml',·1,·'']]],94 ····['rdf_2eh_54',·['rdf.h',·['../rdf_8h.xhtml',·1,·'']]],
95 ····['rdfmoduledata_55',·['rdfmoduledata',·['../classgmx_1_1analysismodules_1_1anonymous__namespace_02rdf_8cpp_03_1_1RdfModuleData.xhtml#a1aaa209e9ec17919e6ed89cd2ba508d6',·1,·'gmx::analysismodules::anonymous_namespace{rdf.cpp}::RdfModuleData::RdfModuleData()'],95 ····['rdfmoduledata_55',·['rdfmoduledata',·['../classgmx_1_1analysismodules_1_1anonymous__namespace_02rdf_8cpp_03_1_1RdfModuleData.xhtml#a1aaa209e9ec17919e6ed89cd2ba508d6',·1,·'gmx::analysismodules::anonymous_namespace{rdf.cpp}::RdfModuleData::RdfModuleData()'],
96 ········['../classgmx_1_1analysismodules_1_1anonymous__namespace_02rdf_8cpp_03_1_1RdfModuleData.xhtml',·1,·'gmx::analysismodules::anonymous_namespace{rdf.cpp}::RdfModuleData']96 ········['../classgmx_1_1analysismodules_1_1anonymous__namespace_02rdf_8cpp_03_1_1RdfModuleData.xhtml',·1,·'gmx::analysismodules::anonymous_namespace{rdf.cpp}::RdfModuleData']
97 ····]],97 ····]],
98 ····['rdfmoduletest_56',·['RdfModuleTest',·['../namespaceanonymous__namespace_02rdf_8cpp_03.xhtml#a557aa8a9fd514da1eb74ebecb02e01a5',·1,·'anonymous_namespace{rdf.cpp}']]],98 ····['rdfmoduletest_56',·['RdfModuleTest',·['../namespaceanonymous__namespace_02rdf_8cpp_03.xhtml#a557aa8a9fd514da1eb74ebecb02e01a5',·1,·'anonymous_namespace{rdf.cpp}']]],
99 ····['reactionfieldexclusioncorrection_57',·['reactionFieldExclusionCorrection',·['../tpi_8cpp.xhtml#ab106b4dcf8da8736674dd5ad709e82e6',·1,·'tpi.cpp']]],99 ····['reactionfieldexclusioncorrection_57',·['reactionFieldExclusionCorrection',·['../tpi_8cpp.xhtml#ab106b4dcf8da8736674dd5ad709e82e6',·1,·'tpi.cpp']]],
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8 ····['s2g1x_3',·['s2g1X',·['../structPmeShared.xhtml#ad1e15cecc59e9828479c91ddcf2cd4b1',·1,·'PmeShared']]],8 ····['s2g1x_3',·['s2g1X',·['../structPmeShared.xhtml#ad1e15cecc59e9828479c91ddcf2cd4b1',·1,·'PmeShared']]],
9 ····['s2g1y_4',·['s2g1Y',·['../structPmeShared.xhtml#ad6cbe8c5bf842666c7518a8c03528208',·1,·'PmeShared']]],9 ····['s2g1y_4',·['s2g1Y',·['../structPmeShared.xhtml#ad6cbe8c5bf842666c7518a8c03528208',·1,·'PmeShared']]],
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73 ····['save_5ffree_48',·['save_free',·['../smalloc_8h.xhtml#a1a8ebd96b293ca1f67b3dd41ff1eb43a',·1,·'smalloc.h']]],73 ····['save_5ffree_48',·['save_free',·['../smalloc_8h.xhtml#a1a8ebd96b293ca1f67b3dd41ff1eb43a',·1,·'smalloc.h']]],
74 ····['save_5ffree_5faligned_49',·['save_free_aligned',·['../smalloc_8h.xhtml#ae35d52a2d595ae960055674b4a0d566a',·1,·'smalloc.h']]],74 ····['save_5ffree_5faligned_49',·['save_free_aligned',·['../smalloc_8h.xhtml#ae35d52a2d595ae960055674b4a0d566a',·1,·'smalloc.h']]],
75 ····['save_5fmalloc_50',·['save_malloc',·['../smalloc_8h.xhtml#a4aa36d45cbe79ee551ea9d2e032be5c7',·1,·'smalloc.cpp']]],75 ····['save_5fmalloc_50',·['save_malloc',·['../smalloc_8h.xhtml#a4aa36d45cbe79ee551ea9d2e032be5c7',·1,·'smalloc.cpp']]],
76 ····['save_5fmalloc_5faligned_51',·['save_malloc_aligned',·['../smalloc_8h.xhtml#ac9f21a1f7ef12e856e74372d8cb9d233',·1,·'smalloc.cpp']]],76 ····['save_5fmalloc_5faligned_51',·['save_malloc_aligned',·['../smalloc_8h.xhtml#ac9f21a1f7ef12e856e74372d8cb9d233',·1,·'smalloc.cpp']]],
77 ····['save_5frealloc_52',·['save_realloc',·['../smalloc_8h.xhtml#af31ca8a44667bdd81e548e75a7b0a31d',·1,·'smalloc.cpp']]],77 ····['save_5frealloc_52',·['save_realloc',·['../smalloc_8h.xhtml#af31ca8a44667bdd81e548e75a7b0a31d',·1,·'smalloc.cpp']]],
 78 ····['savecheckpointstate_53',·['savecheckpointstate',·['../classgmx_1_1VelocityScalingTemperatureCoupling.xhtml#a0613305c51cd85f761021905a7cc6000',·1,·'gmx::VelocityScalingTemperatureCoupling::saveCheckpointState()'],
78 ····['savecheckpointstate_53',·['savecheckpointstate',·['../classgmx_1_1EnergyData_1_1Element.xhtml#a955025d3dc2badd068819b0366263f21',·1,·'gmx::EnergyData::Element::saveCheckpointState()'],79 ········['../classgmx_1_1EnergyData_1_1Element.xhtml#a955025d3dc2badd068819b0366263f21',·1,·'gmx::EnergyData::Element::saveCheckpointState()'],
79 ········['../classgmx_1_1ExpandedEnsembleElement.xhtml#aa81f8ca220fe300d1c4ea3aa561c7d4d',·1,·'gmx::ExpandedEnsembleElement::saveCheckpointState()'],80 ········['../classgmx_1_1ExpandedEnsembleElement.xhtml#aa81f8ca220fe300d1c4ea3aa561c7d4d',·1,·'gmx::ExpandedEnsembleElement::saveCheckpointState()'],
80 ········['../classgmx_1_1FirstOrderPressureCoupling.xhtml#a7215fd9b674948475b7a7394a34cf3e9',·1,·'gmx::FirstOrderPressureCoupling::saveCheckpointState()'],81 ········['../classgmx_1_1FirstOrderPressureCoupling.xhtml#a7215fd9b674948475b7a7394a34cf3e9',·1,·'gmx::FirstOrderPressureCoupling::saveCheckpointState()'],
81 ········['../classgmx_1_1FreeEnergyPerturbationData_1_1Element.xhtml#aa845e4a2a85e58b53f868a3bfe74311a',·1,·'gmx::FreeEnergyPerturbationData::Element::saveCheckpointState()'],82 ········['../classgmx_1_1FreeEnergyPerturbationData_1_1Element.xhtml#aa845e4a2a85e58b53f868a3bfe74311a',·1,·'gmx::FreeEnergyPerturbationData::Element::saveCheckpointState()'],
82 ········['../group__module__modularsimulator.xhtml#gaa70e5868cd4b8559099c8b687810f8df',·1,·'gmx::ICheckpointHelperClient::saveCheckpointState()'],83 ········['../group__module__modularsimulator.xhtml#gaa70e5868cd4b8559099c8b687810f8df',·1,·'gmx::ICheckpointHelperClient::saveCheckpointState()'],
83 ········['../classgmx_1_1MttkData.xhtml#acf983f5ad30b4b8792883b4a69799566',·1,·'gmx::MttkData::saveCheckpointState()'],84 ········['../classgmx_1_1MttkData.xhtml#acf983f5ad30b4b8792883b4a69799566',·1,·'gmx::MttkData::saveCheckpointState()'],
84 ········['../classgmx_1_1NoseHooverChainsData.xhtml#af201f4dac2c01518d6a465a1e395d693',·1,·'gmx::NoseHooverChainsData::saveCheckpointState()'],85 ········['../classgmx_1_1NoseHooverChainsData.xhtml#af201f4dac2c01518d6a465a1e395d693',·1,·'gmx::NoseHooverChainsData::saveCheckpointState()'],
85 ········['../classgmx_1_1ParrinelloRahmanBarostat.xhtml#a6c4ff548b028800659e1e5b01b050cf3',·1,·'gmx::ParrinelloRahmanBarostat::saveCheckpointState()'],86 ········['../classgmx_1_1ParrinelloRahmanBarostat.xhtml#a6c4ff548b028800659e1e5b01b050cf3',·1,·'gmx::ParrinelloRahmanBarostat::saveCheckpointState()'],
86 ········['../classgmx_1_1PullElement.xhtml#acb46bbfd7f683624c4e04585d7151fae',·1,·'gmx::PullElement::saveCheckpointState()'],87 ········['../classgmx_1_1PullElement.xhtml#acb46bbfd7f683624c4e04585d7151fae',·1,·'gmx::PullElement::saveCheckpointState()'],
87 ········['../classgmx_1_1StatePropagatorData_1_1Element.xhtml#aed73d86e0139c581fb13f5a64c3ac591',·1,·'gmx::StatePropagatorData::Element::saveCheckpointState()'],88 ········['../classgmx_1_1StatePropagatorData_1_1Element.xhtml#aed73d86e0139c581fb13f5a64c3ac591',·1,·'gmx::StatePropagatorData::Element::saveCheckpointState()']
88 ········['../classgmx_1_1VelocityScalingTemperatureCoupling.xhtml#a0613305c51cd85f761021905a7cc6000',·1,·'gmx::VelocityScalingTemperatureCoupling::saveCheckpointState()'] 
89 ····]],89 ····]],
90 ····['saveedsampointer_54',·['saveEdsamPointer',·['../classgmx_1_1Constraints.xhtml#aa20d0b058932c4e3ff6725444de6499f',·1,·'gmx::Constraints']]],90 ····['saveedsampointer_54',·['saveEdsamPointer',·['../classgmx_1_1Constraints.xhtml#aa20d0b058932c4e3ff6725444de6499f',·1,·'gmx::Constraints']]],
91 ····['saxsdebye_55',·['saxsdebye',·['../classgmx_1_1SaxsDebye.xhtml',·1,·'gmx::SaxsDebye'], 
92 ········['../classgmx_1_1SaxsDebye.xhtml#a678e01fbb38f9e7d22bb5bd2efa414b6',·1,·'gmx::SaxsDebye::SaxsDebye()']91 ····['saxsdebye_55',·['saxsdebye',·['../classgmx_1_1SaxsDebye.xhtml#a678e01fbb38f9e7d22bb5bd2efa414b6',·1,·'gmx::SaxsDebye::SaxsDebye()'],
 92 ········['../classgmx_1_1SaxsDebye.xhtml',·1,·'gmx::SaxsDebye']
93 ····]],93 ····]],
94 ····['sbase_56',·['sbase',·['../structgmx__ana__poscalc__t.xhtml#a72b00bc053d3b7b79e594b1b6e5fa733',·1,·'gmx_ana_poscalc_t']]],94 ····['sbase_56',·['sbase',·['../structgmx__ana__poscalc__t.xhtml#a72b00bc053d3b7b79e594b1b6e5fa733',·1,·'gmx_ana_poscalc_t']]],
95 ····['sblock_57',·['sblock',·['../structgmx_1_1shakedata.xhtml#a119cbdb92204daa557f75d7a14bbeb8c',·1,·'gmx::shakedata']]],95 ····['sblock_57',·['sblock',·['../structgmx_1_1shakedata.xhtml#a119cbdb92204daa557f75d7a14bbeb8c',·1,·'gmx::shakedata']]],
96 ····['sc_58',·['sc',·['../structgmx__sel__lexer__t.xhtml#a82dc052b54870d8ea2770036c241af08',·1,·'gmx_sel_lexer_t']]],96 ····['sc_58',·['sc',·['../structgmx__sel__lexer__t.xhtml#a82dc052b54870d8ea2770036c241af08',·1,·'gmx_sel_lexer_t']]],
97 ····['sc_5f_59',·['sc_',·['../classgmx_1_1SelectionCollection_1_1Impl.xhtml#a7ce70ac756fedffc234e93074714b732',·1,·'gmx::SelectionCollection::Impl']]],97 ····['sc_5f_59',·['sc_',·['../classgmx_1_1SelectionCollection_1_1Impl.xhtml#a7ce70ac756fedffc234e93074714b732',·1,·'gmx::SelectionCollection::Impl']]],
98 ····['sc_5fatominfo_5fenergygroupidmask_60',·['sc_atomInfo_EnergyGroupIdMask',·['../namespacegmx.xhtml#a4074ea4c177fa4b5dd3e6c57e45d9184',·1,·'gmx']]],98 ····['sc_5fatominfo_5fenergygroupidmask_60',·['sc_atomInfo_EnergyGroupIdMask',·['../namespacegmx.xhtml#a4074ea4c177fa4b5dd3e6c57e45d9184',·1,·'gmx']]],
99 ····['sc_5fatominfo_5ffreeenergyperturbation_61',·['sc_atomInfo_FreeEnergyPerturbation',·['../namespacegmx.xhtml#a2300c570bd4a239ec9f1d49f4f55dd38',·1,·'gmx']]],99 ····['sc_5fatominfo_5ffreeenergyperturbation_61',·['sc_atomInfo_FreeEnergyPerturbation',·['../namespacegmx.xhtml#a2300c570bd4a239ec9f1d49f4f55dd38',·1,·'gmx']]],
Offset 113, 80 lines modifiedOffset 113, 80 lines modified
113 ····['sc_5fworkgroupsize_75',·['sc_workGroupSize',·['../namespacegmx.xhtml#ac85e48554e6e1788ea930b7064d371a6',·1,·'gmx']]],113 ····['sc_5fworkgroupsize_75',·['sc_workGroupSize',·['../namespacegmx.xhtml#ac85e48554e6e1788ea930b7064d371a6',·1,·'gmx']]],
114 ····['sc_5fxoldwholename_5f_76',·['sc_xOldWholeName_',·['../structgmx_1_1ColvarsForceProviderState.xhtml#a4ae85de69074dadd19c5fc012a3cccc8',·1,·'gmx::ColvarsForceProviderState']]],114 ····['sc_5fxoldwholename_5f_76',·['sc_xOldWholeName_',·['../structgmx_1_1ColvarsForceProviderState.xhtml#a4ae85de69074dadd19c5fc012a3cccc8',·1,·'gmx::ColvarsForceProviderState']]],
115 ····['scalar_2eh_77',·['scalar.h',·['../scalar_8h.xhtml',·1,·'']]],115 ····['scalar_2eh_77',·['scalar.h',·['../scalar_8h.xhtml',·1,·'']]],
116 ····['scalar_5fmath_2eh_78',·['scalar_math.h',·['../scalar__math_8h.xhtml',·1,·'']]],116 ····['scalar_5fmath_2eh_78',·['scalar_math.h',·['../scalar__math_8h.xhtml',·1,·'']]],
117 ····['scalar_5futil_2eh_79',·['scalar_util.h',·['../scalar__util_8h.xhtml',·1,·'']]],117 ····['scalar_5futil_2eh_79',·['scalar_util.h',·['../scalar__util_8h.xhtml',·1,·'']]],
118 ····['scalardatatypes_80',·['ScalarDataTypes',·['../structScalarDataTypes.xhtml',·1,·'']]],118 ····['scalardatatypes_80',·['ScalarDataTypes',·['../structScalarDataTypes.xhtml',·1,·'']]],
119 ····['scalarforce_81',·['scalarForce',·['../structpull__coord__work__t.xhtml#adde522794352e2ebc796944dcda04204',·1,·'pull_coord_work_t']]],119 ····['scalarforce_81',·['scalarForce',·['../structpull__coord__work__t.xhtml#adde522794352e2ebc796944dcda04204',·1,·'pull_coord_work_t']]],
 120 ····['scale_82',·['scale',·['../structt__forcetable.xhtml#a74042b613c0660e9d1a66b49147d0159',·1,·'t_forcetable::scale'],
120 ····['scale_82',·['scale',·['../classgmx_1_1MttkData.xhtml#aa587cc1c76049dce893923692e23d769',·1,·'gmx::MttkData::scale()'],121 ········['../classgmx_1_1MttkData.xhtml#aa587cc1c76049dce893923692e23d769',·1,·'gmx::MttkData::scale()'],
121 ········['../structt__forcetable.xhtml#a74042b613c0660e9d1a66b49147d0159',·1,·'t_forcetable::scale'], 
122 ········['../structPmeGpuDynamicParams.xhtml#a5c019da79bddcfb0ac07f2a757a269bc',·1,·'PmeGpuDynamicParams::scale']122 ········['../structPmeGpuDynamicParams.xhtml#a5c019da79bddcfb0ac07f2a757a269bc',·1,·'PmeGpuDynamicParams::scale']
123 ····]],123 ····]],
124 ····['scaleall_83',·['scaleAll',·['../classgmx_1_1AbstractAverageHistogram.xhtml#a749915682fa7728ee088dfd6726b1736',·1,·'gmx::AbstractAverageHistogram']]],124 ····['scaleall_83',·['scaleAll',·['../classgmx_1_1AbstractAverageHistogram.xhtml#a749915682fa7728ee088dfd6726b1736',·1,·'gmx::AbstractAverageHistogram']]],
125 ····['scaleallbyvector_84',·['scaleAllByVector',·['../classgmx_1_1AbstractAverageHistogram.xhtml#aabe3becd12550d662e727afbd168f433',·1,·'gmx::AbstractAverageHistogram']]],125 ····['scaleallbyvector_84',·['scaleAllByVector',·['../classgmx_1_1AbstractAverageHistogram.xhtml#aabe3becd12550d662e727afbd168f433',·1,·'gmx::AbstractAverageHistogram']]],
126 ····['scalebox_85',·['scaleBox',·['../classEwaldBoxZScaler.xhtml#a67431757f83b309cf81b3cf96eabe7bf',·1,·'EwaldBoxZScaler']]],126 ····['scalebox_85',·['scaleBox',·['../classEwaldBoxZScaler.xhtml#a67431757f83b309cf81b3cf96eabe7bf',·1,·'EwaldBoxZScaler']]],
127 ····['scalebyvector_86',·['scaleByVector',·['../namespacegmx.xhtml#ae92e5fa525c52dcde660bb171c3fe5a2',·1,·'gmx']]],127 ····['scalebyvector_86',·['scaleByVector',·['../namespacegmx.xhtml#ae92e5fa525c52dcde660bb171c3fe5a2',·1,·'gmx']]],
128 ····['scalecoordinates_87',·['scaleCoordinates',·['../classgmx_1_1UpdateConstrainGpu_1_1Impl.xhtml#a9376d1cbbecb20c18661950973814d0d',·1,·'gmx::UpdateConstrainGpu::Impl']]],128 ····['scalecoordinates_87',·['scaleCoordinates',·['../classgmx_1_1UpdateConstrainGpu_1_1Impl.xhtml#a9376d1cbbecb20c18661950973814d0d',·1,·'gmx::UpdateConstrainGpu::Impl']]],
129 ····['scaled_5flagrange_5fmultiplier_88',·['scaled_lagrange_multiplier',·['../structgmx_1_1shakedata.xhtml#adde8f58fcb5ada8d634039c00ca42a58',·1,·'gmx::shakedata']]],129 ····['scaled_5flagrange_5fmultiplier_88',·['scaled_lagrange_multiplier',·['../structgmx_1_1shakedata.xhtml#adde8f58fcb5ada8d634039c00ca42a58',·1,·'gmx::shakedata']]],
130 ····['scaledsampleweight_89',·['ScaledSampleWeight',·['../namespacegmx.xhtml#aa78c6481d10a93316c155ffdf021e581a7cffc85b2f1c2177a818913479ea4f18',·1,·'gmx']]],130 ····['scaledsampleweight_89',·['ScaledSampleWeight',·['../namespacegmx.xhtml#aa78c6481d10a93316c155ffdf021e581a7cffc85b2f1c2177a818913479ea4f18',·1,·'gmx']]],
131 ····['scaleinternaltouserinput_90',·['scaleInternalToUserInput',·['../structgmx_1_1DimParams.xhtml#a8b7199033caa1dbea6f4fbc8457c3103',·1,·'gmx::DimParams']]],131 ····['scaleinternaltouserinput_90',·['scaleInternalToUserInput',·['../structgmx_1_1DimParams.xhtml#a8b7199033caa1dbea6f4fbc8457c3103',·1,·'gmx::DimParams']]],
132 ····['scalekernel_91',·['scaleKernel',·['../namespacegmx.xhtml#a9a2c10562bd2d5f931c5ef55c75f595f',·1,·'gmx']]],132 ····['scalekernel_91',·['scaleKernel',·['../namespacegmx.xhtml#a9a2c10562bd2d5f931c5ef55c75f595f',·1,·'gmx']]],
133 ····['scaleoperationonly_92',·['scaleOperationOnly',·['../classgmx_1_1TranslateAndScale.xhtml#acc95c4510196adaa2be2e247eaa400a6',·1,·'gmx::TranslateAndScale']]],133 ····['scaleoperationonly_92',·['scaleOperationOnly',·['../classgmx_1_1TranslateAndScale.xhtml#acc95c4510196adaa2be2e247eaa400a6',·1,·'gmx::TranslateAndScale']]],
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Offset 64, 29 lines modifiedOffset 64, 29 lines modified
64 ····['tableinteraction_49',·['TableInteraction',·['../forcetable_8h.xhtml#a5ab83e2e3173b76df0ca2b9ca595040c',·1,·'forcetable.h']]],64 ····['tableinteraction_49',·['TableInteraction',·['../forcetable_8h.xhtml#a5ab83e2e3173b76df0ca2b9ca595040c',·1,·'forcetable.h']]],
65 ····['tablesoffsets_50',·['tablesOffsets',·['../structPmeGpuGridParams.xhtml#a705c9e648f29b1dc77275482d31b5e2e',·1,·'PmeGpuGridParams']]],65 ····['tablesoffsets_50',·['tablesOffsets',·['../structPmeGpuGridParams.xhtml#a705c9e648f29b1dc77275482d31b5e2e',·1,·'PmeGpuGridParams']]],
66 ····['tablespacing_51',·['tablespacing',·['../classgmx_1_1CubicSplineTable.xhtml#a68e69e9f9e7653a0f59b4417d9278055',·1,·'gmx::CubicSplineTable::tableSpacing()'],66 ····['tablespacing_51',·['tablespacing',·['../classgmx_1_1CubicSplineTable.xhtml#a68e69e9f9e7653a0f59b4417d9278055',·1,·'gmx::CubicSplineTable::tableSpacing()'],
67 ········['../classgmx_1_1QuadraticSplineTable.xhtml#a01c2df243de4371cf4c88ed712073ec4',·1,·'gmx::QuadraticSplineTable::tableSpacing()']67 ········['../classgmx_1_1QuadraticSplineTable.xhtml#a01c2df243de4371cf4c88ed712073ec4',·1,·'gmx::QuadraticSplineTable::tableSpacing()']
68 ····]],68 ····]],
69 ····['tabulated_5fbonded_5finteractions_2ecpp_52',·['tabulated_bonded_interactions.cpp',·['../tabulated__bonded__interactions_8cpp.xhtml',·1,·'']]],69 ····['tabulated_5fbonded_5finteractions_2ecpp_52',·['tabulated_bonded_interactions.cpp',·['../tabulated__bonded__interactions_8cpp.xhtml',·1,·'']]],
70 ····['tabulated_5fpot_53',·['tabulated_pot',·['../gmx__wham_8cpp.xhtml#a0274f4fbc68349f4127af1ea77473b89',·1,·'gmx_wham.cpp']]],70 ····['tabulated_5fpot_53',·['tabulated_pot',·['../gmx__wham_8cpp.xhtml#a0274f4fbc68349f4127af1ea77473b89',·1,·'gmx_wham.cpp']]],
 71 ····['tabulatednormaldistribution_54',·['tabulatednormaldistribution',·['../classgmx_1_1TabulatedNormalDistribution.xhtml#abb053676a2ca8ed4f5a9908bc70f25a7',·1,·'gmx::TabulatedNormalDistribution::TabulatedNormalDistribution()'],
71 ····['tabulatednormaldistribution_54',·['tabulatednormaldistribution',·['../classgmx_1_1TabulatedNormalDistribution.xhtml',·1,·'gmx::TabulatedNormalDistribution&lt;·RealType,·tableBits·&gt;'],72 ········['../classgmx_1_1TabulatedNormalDistribution.xhtml',·1,·'gmx::TabulatedNormalDistribution&lt;·RealType,·tableBits·&gt;'],
72 ········['../classgmx_1_1TabulatedNormalDistribution.xhtml#abb053676a2ca8ed4f5a9908bc70f25a7',·1,·'gmx::TabulatedNormalDistribution::TabulatedNormalDistribution(result_type·mean=0.0,·result_type·stddev=1.0)'], 
73 ········['../classgmx_1_1TabulatedNormalDistribution.xhtml#ad090e6c16ba8f5b3a5408d8c07788dd3',·1,·'gmx::TabulatedNormalDistribution::TabulatedNormalDistribution(const·param_type·&amp;param)']73 ········['../classgmx_1_1TabulatedNormalDistribution.xhtml#ad090e6c16ba8f5b3a5408d8c07788dd3',·1,·'gmx::TabulatedNormalDistribution::TabulatedNormalDistribution()']
74 ····]],74 ····]],
75 ····['tabulatednormaldistribution_2ecpp_55',·['tabulatednormaldistribution.cpp',·['../tests_2tabulatednormaldistribution_8cpp.xhtml',·1,·'']]],75 ····['tabulatednormaldistribution_2ecpp_55',·['tabulatednormaldistribution.cpp',·['../tests_2tabulatednormaldistribution_8cpp.xhtml',·1,·'']]],
76 ····['tabulatednormaldistribution_2eh_56',·['tabulatednormaldistribution.h',·['../tabulatednormaldistribution_8h.xhtml',·1,·'']]],76 ····['tabulatednormaldistribution_2eh_56',·['tabulatednormaldistribution.h',·['../tabulatednormaldistribution_8h.xhtml',·1,·'']]],
77 ····['tabulatestructurefactors_57',·['tabulateStructureFactors',·['../ewald_8cpp.xhtml#aa3544b10e91b5c8dcfa5a114a5bc5a96',·1,·'ewald.cpp']]],77 ····['tabulatestructurefactors_57',·['tabulateStructureFactors',·['../ewald_8cpp.xhtml#aa3544b10e91b5c8dcfa5a114a5bc5a96',·1,·'ewald.cpp']]],
78 ····['tag_58',·['tag',·['../group__module__modularsimulator.xhtml#ga049d88cc31c3267253efbde42699ad28',·1,·'gmx::PropagatorConnection']]],78 ····['tag_58',·['tag',·['../group__module__modularsimulator.xhtml#ga049d88cc31c3267253efbde42699ad28',·1,·'gmx::PropagatorConnection']]],
 79 ····['tan_59',·['tan',·['../namespacegmx.xhtml#a7063173231453ec737688c8d91aa0749',·1,·'gmx::tan(float·x)'],
79 ····['tan_59',·['tan',·['../namespacegmx.xhtml#a45e727a4960ac7f8ba5149f9b251c520',·1,·'gmx::tan(double·x)'],80 ········['../namespacegmx.xhtml#a45e727a4960ac7f8ba5149f9b251c520',·1,·'gmx::tan(double·x)']
80 ········['../namespacegmx.xhtml#a7063173231453ec737688c8d91aa0749',·1,·'gmx::tan(float·x)'] 
81 ····]],81 ····]],
82 ····['tansingleaccuracy_60',·['tanSingleAccuracy',·['../namespacegmx.xhtml#a0f979f3defa4f725cfce2d7e93fc0d9e',·1,·'gmx']]],82 ····['tansingleaccuracy_60',·['tanSingleAccuracy',·['../namespacegmx.xhtml#a0f979f3defa4f725cfce2d7e93fc0d9e',·1,·'gmx']]],
83 ····['target_61',·['target',·['../classgmx_1_1PointState.xhtml#a573114820ae0977c2eb9c666068351fd',·1,·'gmx::PointState::target()'], 
84 ········['../namespaceanonymous__namespace_02edsam_8cpp_03.xhtml#ae261c5a75fa1c55507798631058dd98aac41a31890959544c6523af684561abe5',·1,·'anonymous_namespace{edsam.cpp}::Target'],83 ····['target_61',·['target',·['../namespaceanonymous__namespace_02edsam_8cpp_03.xhtml#ae261c5a75fa1c55507798631058dd98aac41a31890959544c6523af684561abe5',·1,·'anonymous_namespace{edsam.cpp}::Target'],
85 ········['../namespacegmx.xhtml#aed0429233bc357e419dafee7b8bd1344ac41a31890959544c6523af684561abe5',·1,·'gmx::Target']84 ········['../namespacegmx.xhtml#aed0429233bc357e419dafee7b8bd1344ac41a31890959544c6523af684561abe5',·1,·'gmx::Target'],
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86 ····]],86 ····]],
87 ····['targetbinsize_62',·['targetbinsize',·['../structmethoddata__insolidangle.xhtml#a17572bdc8c982bc6913a351b6b84ada6',·1,·'methoddata_insolidangle']]],87 ····['targetbinsize_62',·['targetbinsize',·['../structmethoddata__insolidangle.xhtml#a17572bdc8c982bc6913a351b6b84ada6',·1,·'methoddata_insolidangle']]],
88 ····['targeterror_63',·['TargetError',·['../namespacegmx.xhtml#aa78c6481d10a93316c155ffdf021e581a461586ff73a95486e167031a14a63505',·1,·'gmx']]],88 ····['targeterror_63',·['TargetError',·['../namespacegmx.xhtml#aa78c6481d10a93316c155ffdf021e581a461586ff73a95486e167031a14a63505',·1,·'gmx']]],
89 ····['targetmetricscalinglimit_64',·['targetMetricScalingLimit',·['../classgmx_1_1BiasParams.xhtml#ac7f8b46646c1728c7b6938077dff82f6',·1,·'gmx::BiasParams']]],89 ····['targetmetricscalinglimit_64',·['targetMetricScalingLimit',·['../classgmx_1_1BiasParams.xhtml#ac7f8b46646c1728c7b6938077dff82f6',·1,·'gmx::BiasParams']]],
90 ····['task_65',·['task',·['../classgmx_1_1Lincs.xhtml#add4a8ebb5f4f323ded4a65a105eb9830',·1,·'gmx::Lincs::task'],90 ····['task_65',·['task',·['../classgmx_1_1Lincs.xhtml#add4a8ebb5f4f323ded4a65a105eb9830',·1,·'gmx::Lincs::task'],
91 ········['../structanonymous__namespace_02lincs_8cpp_03_1_1Task.xhtml',·1,·'anonymous_namespace{lincs.cpp}::Task']91 ········['../structanonymous__namespace_02lincs_8cpp_03_1_1Task.xhtml',·1,·'anonymous_namespace{lincs.cpp}::Task']
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7 ····['uint8_1',·['uInt8',·['../namespacegmx.xhtml#a4355a7e0f393d42cbb5b2a47aefea966ab0cffa75aa037e628ccfdf46bcc086ac',·1,·'gmx']]],7 ····['uint8_1',·['uInt8',·['../namespacegmx.xhtml#a4355a7e0f393d42cbb5b2a47aefea966ab0cffa75aa037e628ccfdf46bcc086ac',·1,·'gmx']]],
8 ····['ulptol_5f_2',·['ulpTol_',·['../classgmx_1_1test_1_1SimdBaseTest.xhtml#a9e2abac54e05356364ecdb0751e8665b',·1,·'gmx::test::SimdBaseTest']]],8 ····['ulptol_5f_2',·['ulpTol_',·['../classgmx_1_1test_1_1SimdBaseTest.xhtml#a9e2abac54e05356364ecdb0751e8665b',·1,·'gmx::test::SimdBaseTest']]],
9 ····['ulptolerance_3',·['ulpTolerance',·['../group__module__testutils.xhtml#gaba89bc71f24fe31ec8f9c07835a245fc',·1,·'gmx::test::FloatingPointTolerance']]],9 ····['ulptolerance_3',·['ulpTolerance',·['../group__module__testutils.xhtml#gaba89bc71f24fe31ec8f9c07835a245fc',·1,·'gmx::test::FloatingPointTolerance']]],
10 ····['umbrellagridpoint_4',·['umbrellaGridpoint',·['../classgmx_1_1CoordState.xhtml#a714530cf26b77af8bff5d1318c129b11',·1,·'gmx::CoordState']]],10 ····['umbrellagridpoint_4',·['umbrellaGridpoint',·['../classgmx_1_1CoordState.xhtml#a714530cf26b77af8bff5d1318c129b11',·1,·'gmx::CoordState']]],
11 ····['umbrellaoptions_5',·['UmbrellaOptions',·['../structUmbrellaOptions.xhtml',·1,·'']]],11 ····['umbrellaoptions_5',·['UmbrellaOptions',·['../structUmbrellaOptions.xhtml',·1,·'']]],
12 ····['unavailable_6',·['Unavailable',·['../device__information_8h.xhtml#a0b85af2bfbb9599409b639e98717c888a453e6aa38d87b28ccae545967c53004f',·1,·'device_information.h']]],12 ····['unavailable_6',·['Unavailable',·['../device__information_8h.xhtml#a0b85af2bfbb9599409b639e98717c888a453e6aa38d87b28ccae545967c53004f',·1,·'device_information.h']]],
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14 ····['undefined_8',·['undefined',·['../namespaceanonymous__namespace_02histogram_8cpp_03.xhtml#a5b8a8a888bca187bb11799895c7a766e',·1,·'anonymous_namespace{histogram.cpp}::UNDEFINED'],15 ········['../namespaceanonymous__namespace_02histogram_8cpp_03.xhtml#a5b8a8a888bca187bb11799895c7a766e',·1,·'anonymous_namespace{histogram.cpp}::UNDEFINED']
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16 ····]],16 ····]],
17 ····['uniform_5fload_5fcluster_5fpair_5fdata_9',·['UNIFORM_LOAD_CLUSTER_PAIR_DATA',·['../nbnxm__sycl__kernel__utils_8h.xhtml#ade8af812c46261b419b718d9c9cb14a8',·1,·'nbnxm_sycl_kernel_utils.h']]],17 ····['uniform_5fload_5fcluster_5fpair_5fdata_9',·['UNIFORM_LOAD_CLUSTER_PAIR_DATA',·['../nbnxm__sycl__kernel__utils_8h.xhtml#ade8af812c46261b419b718d9c9cb14a8',·1,·'nbnxm_sycl_kernel_utils.h']]],
18 ····['uniformintdistribution_10',·['uniformintdistribution',·['../classgmx_1_1UniformIntDistribution.xhtml#a790697adc208c8ecf2e9164ea00cf24b',·1,·'gmx::UniformIntDistribution::UniformIntDistribution()'],18 ····['uniformintdistribution_10',·['uniformintdistribution',·['../classgmx_1_1UniformIntDistribution.xhtml#a790697adc208c8ecf2e9164ea00cf24b',·1,·'gmx::UniformIntDistribution::UniformIntDistribution()'],
19 ········['../classgmx_1_1UniformIntDistribution.xhtml',·1,·'gmx::UniformIntDistribution&lt;·IntType·&gt;'],19 ········['../classgmx_1_1UniformIntDistribution.xhtml',·1,·'gmx::UniformIntDistribution&lt;·IntType·&gt;'],
20 ········['../classgmx_1_1UniformIntDistribution.xhtml#a09808fada94acf89dc12c30310afaeda',·1,·'gmx::UniformIntDistribution::UniformIntDistribution()']20 ········['../classgmx_1_1UniformIntDistribution.xhtml#a09808fada94acf89dc12c30310afaeda',·1,·'gmx::UniformIntDistribution::UniformIntDistribution()']
21 ····]],21 ····]],
22 ····['uniformintdistribution_2ecpp_11',·['uniformintdistribution.cpp',·['../uniformintdistribution_8cpp.xhtml',·1,·'']]],22 ····['uniformintdistribution_2ecpp_11',·['uniformintdistribution.cpp',·['../uniformintdistribution_8cpp.xhtml',·1,·'']]],
23 ····['uniformintdistribution_2eh_12',·['uniformintdistribution.h',·['../uniformintdistribution_8h.xhtml',·1,·'']]],23 ····['uniformintdistribution_2eh_12',·['uniformintdistribution.h',·['../uniformintdistribution_8h.xhtml',·1,·'']]],
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24 ····['uniformrealdistribution_13',·['uniformrealdistribution',·['../classgmx_1_1UniformRealDistribution.xhtml#a8a58a25b5bc17882dfc3671530d1aad3',·1,·'gmx::UniformRealDistribution::UniformRealDistribution(const·param_type·&amp;param)'],25 ········['../classgmx_1_1UniformRealDistribution.xhtml#a8a58a25b5bc17882dfc3671530d1aad3',·1,·'gmx::UniformRealDistribution::UniformRealDistribution(const·param_type·&amp;param)'],
25 ········['../classgmx_1_1UniformRealDistribution.xhtml#abf980964b1ce2f1fade69a0578b25e33',·1,·'gmx::UniformRealDistribution::UniformRealDistribution(result_type·a=0.0,·result_type·b=1.0)'],26 ········['../classgmx_1_1UniformRealDistribution.xhtml#abf980964b1ce2f1fade69a0578b25e33',·1,·'gmx::UniformRealDistribution::UniformRealDistribution(result_type·a=0.0,·result_type·b=1.0)']
26 ········['../classgmx_1_1UniformRealDistribution.xhtml',·1,·'gmx::UniformRealDistribution&lt;·RealType·&gt;'] 
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29 ····['uniformrealdistribution_2eh_15',·['uniformrealdistribution.h',·['../uniformrealdistribution_8h.xhtml',·1,·'']]],29 ····['uniformrealdistribution_2eh_15',·['uniformrealdistribution.h',·['../uniformrealdistribution_8h.xhtml',·1,·'']]],
30 ····['unionfind_2ecpp_16',·['unionfind.cpp',·['../unionfind_8cpp.xhtml',·1,·'']]],30 ····['unionfind_2ecpp_16',·['unionfind.cpp',·['../unionfind_8cpp.xhtml',·1,·'']]],
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33 ····['unique_5fcptr_19',·['unique_cptr',·['../namespacegmx.xhtml#a89d1da25b1e1f9331f1fe99b15072eac',·1,·'gmx']]],33 ····['unique_5fcptr_19',·['unique_cptr',·['../namespacegmx.xhtml#a89d1da25b1e1f9331f1fe99b15072eac',·1,·'gmx']]],
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44 ····['unitcelltype_26',·['UnitCellType',·['../namespacegmx.xhtml#af897bff42be729e6eaf3c4dc6e199722',·1,·'gmx']]],44 ····['unitcelltype_26',·['UnitCellType',·['../namespacegmx.xhtml#af897bff42be729e6eaf3c4dc6e199722',·1,·'gmx']]],
45 ····['unitcelltypenames_27',·['unitCellTypeNames',·['../namespacegmx.xhtml#ae81efb97e81499b750d906d26a29ce18',·1,·'gmx']]],45 ····['unitcelltypenames_27',·['unitCellTypeNames',·['../namespacegmx.xhtml#ae81efb97e81499b750d906d26a29ce18',·1,·'gmx']]],
46 ····['unittest_5fmain_2ecpp_28',·['unittest_main.cpp',·['../unittest__main_8cpp.xhtml',·1,·'']]],46 ····['unittest_5fmain_2ecpp_28',·['unittest_main.cpp',·['../unittest__main_8cpp.xhtml',·1,·'']]],
47 ····['unitvector_29',·['unitvector',·['../namespacegmx.xhtml#a5bc71ede59923e4d25b11a995139970a',·1,·'gmx::unitVector()'],47 ····['unitvector_29',·['unitvector',·['../namespacegmx.xhtml#a5bc71ede59923e4d25b11a995139970a',·1,·'gmx::unitVector()'],
48 ········['../classgmx_1_1BasicVector.xhtml#a4e7218ba6cbb3bc735e31a43597ec7a9',·1,·'gmx::BasicVector::unitVector()']48 ········['../classgmx_1_1BasicVector.xhtml#a4e7218ba6cbb3bc735e31a43597ec7a9',·1,·'gmx::BasicVector::unitVector()']
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51 ····['unknown_31',·['unknown',·['../namespacegmx.xhtml#a20e189e3f31f5f1e8581a5cc84063453a88183b946cc5f0e8c96b2e66e1c74a7e',·1,·'gmx::Unknown'], 
52 ········['../device__information_8h.xhtml#a5514710e3c78d4816da9e8d2e3cd508ca88183b946cc5f0e8c96b2e66e1c74a7e',·1,·'Unknown:&#160;device_information.h'],51 ····['unknown_31',·['unknown',·['../device__information_8h.xhtml#a5514710e3c78d4816da9e8d2e3cd508ca88183b946cc5f0e8c96b2e66e1c74a7e',·1,·'Unknown:&#160;device_information.h'],
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53 ········['../classgmx_1_1CpuInfo.xhtml#acd7ff27553f3ff9fd1037c30c21a24f1a88183b946cc5f0e8c96b2e66e1c74a7e',·1,·'gmx::CpuInfo::Unknown']53 ········['../classgmx_1_1CpuInfo.xhtml#acd7ff27553f3ff9fd1037c30c21a24f1a88183b946cc5f0e8c96b2e66e1c74a7e',·1,·'gmx::CpuInfo::Unknown']
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57 ····['unpackrecvbufkernel_34',·['unpackRecvBufKernel',·['../namespacegmx.xhtml#a704128fa72f8ce7dcf08d0063a166036',·1,·'gmx']]],57 ····['unpackrecvbufkernel_34',·['unpackRecvBufKernel',·['../namespacegmx.xhtml#a704128fa72f8ce7dcf08d0063a166036',·1,·'gmx']]],
58 ····['unpaddedarrayref_35',·['unpaddedArrayRef',·['../classgmx_1_1ArrayRefWithPadding.xhtml#ad5b878ca7749f5b8f52e006269fbfc2f',·1,·'gmx::ArrayRefWithPadding']]],58 ····['unpaddedarrayref_35',·['unpaddedArrayRef',·['../classgmx_1_1ArrayRefWithPadding.xhtml#ad5b878ca7749f5b8f52e006269fbfc2f',·1,·'gmx::ArrayRefWithPadding']]],
59 ····['unpaddedconstarrayref_36',·['unpaddedConstArrayRef',·['../classgmx_1_1ArrayRefWithPadding.xhtml#a2c3f73497c6bc71264ae1af84b6522ae',·1,·'gmx::ArrayRefWithPadding']]],59 ····['unpaddedconstarrayref_36',·['unpaddedConstArrayRef',·['../classgmx_1_1ArrayRefWithPadding.xhtml#a2c3f73497c6bc71264ae1af84b6522ae',·1,·'gmx::ArrayRefWithPadding']]],
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196 ····['usemdgpugraph_142',·['usemdgpugraph',·['../structgmx__pme__pp.xhtml#a5ca26c02e2042980d7262c36a11b41ae',·1,·'gmx_pme_pp::useMdGpuGraph'],196 ····['usemdgpugraph_142',·['usemdgpugraph',·['../structgmx__pme__pp.xhtml#a5ca26c02e2042980d7262c36a11b41ae',·1,·'gmx_pme_pp::useMdGpuGraph'],
197 ········['../classgmx_1_1SimulationWorkload.xhtml#a76cb5c0c6b1dcb6f85e381dfbfc5046f',·1,·'gmx::SimulationWorkload::useMdGpuGraph']197 ········['../classgmx_1_1SimulationWorkload.xhtml#a76cb5c0c6b1dcb6f85e381dfbfc5046f',·1,·'gmx::SimulationWorkload::useMdGpuGraph']
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200 ····['usemts_144',·['useMts',·['../classgmx_1_1SimulationWorkload.xhtml#ac585c3fa9df3937cb8ae629aa07df131',·1,·'gmx::SimulationWorkload']]],200 ····['usemts_144',·['useMts',·['../classgmx_1_1SimulationWorkload.xhtml#ac585c3fa9df3937cb8ae629aa07df131',·1,·'gmx::SimulationWorkload']]],
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203 ········['../structgmx__pme__pp.xhtml#ab6ada3585bcb5d11417e20579c9842bd',·1,·'gmx_pme_pp::useNvshmem'],203 ········['../structgmx__pme__pp.xhtml#ab6ada3585bcb5d11417e20579c9842bd',·1,·'gmx_pme_pp::useNvshmem'],
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209 ····['usercoordunitstointernal_5f_150',·['userCoordUnitsToInternal_',·['../structgmx_1_1DimParams.xhtml#a6bc5656f8c83287c262adf1ca79b1515',·1,·'gmx::DimParams']]],209 ····['usercoordunitstointernal_5f_150',·['userCoordUnitsToInternal_',·['../structgmx_1_1DimParams.xhtml#a6bc5656f8c83287c262adf1ca79b1515',·1,·'gmx::DimParams']]],
210 ····['userdefinedfloat_5f_151',·['userDefinedFloat_',·['../structgmx_1_1MrcDensityMapHeader.xhtml#abec7c46e44fcc58659f2e4f08ce3ca69',·1,·'gmx::MrcDensityMapHeader']]],210 ····['userdefinedfloat_5f_151',·['userDefinedFloat_',·['../structgmx_1_1MrcDensityMapHeader.xhtml#abec7c46e44fcc58659f2e4f08ce3ca69',·1,·'gmx::MrcDensityMapHeader']]],
211 ····['usergpuids_2ecpp_152',·['usergpuids.cpp',·['../usergpuids_8cpp.xhtml',·1,·'(Global·Namespace)'],211 ····['usergpuids_2ecpp_152',·['usergpuids.cpp',·['../tests_2usergpuids_8cpp.xhtml',·1,·'(Global·Namespace)'],
212 ········['../tests_2usergpuids_8cpp.xhtml',·1,·'(Global·Namespace)']212 ········['../usergpuids_8cpp.xhtml',·1,·'(Global·Namespace)']
213 ····]],213 ····]],
214 ····['usergpuids_2eh_153',·['usergpuids.h',·['../usergpuids_8h.xhtml',·1,·'']]],214 ····['usergpuids_2eh_153',·['usergpuids.h',·['../usergpuids_8h.xhtml',·1,·'']]],
215 ····['usergputaskassignment_154',·['userGpuTaskAssignment',·['../structgmx__hw__opt__t.xhtml#aa385ff3c0e1cad123e457fa57756f6d9',·1,·'gmx_hw_opt_t']]],215 ····['usergputaskassignment_154',·['userGpuTaskAssignment',·['../structgmx__hw__opt__t.xhtml#aa385ff3c0e1cad123e457fa57756f6d9',·1,·'gmx_hw_opt_t']]],
216 ····['userinputerror_155',·['userinputerror',·['../classgmx_1_1UserInputError.xhtml#a07ae9dc1612508d54e18079cebdc4316',·1,·'gmx::UserInputError::UserInputError()'],216 ····['userinputerror_155',·['userinputerror',·['../classgmx_1_1UserInputError.xhtml#a07ae9dc1612508d54e18079cebdc4316',·1,·'gmx::UserInputError::UserInputError()'],
217 ········['../classgmx_1_1UserInputError.xhtml',·1,·'gmx::UserInputError']217 ········['../classgmx_1_1UserInputError.xhtml',·1,·'gmx::UserInputError']
218 ····]],218 ····]],
219 ····['userinputtest_156',·['UserInputTest',·['../classgmx_1_1test_1_1UserInputTest.xhtml',·1,·'gmx::test']]],219 ····['userinputtest_156',·['UserInputTest',·['../classgmx_1_1test_1_1UserInputTest.xhtml',·1,·'gmx::test']]],
220 ····['usesimd_157',·['useSimd',·['../classgmx_1_1SettleData.xhtml#a6f48e1b037af7f441ccf2119bc5a3d21',·1,·'gmx::SettleData']]],220 ····['usesimd_157',·['useSimd',·['../classgmx_1_1SettleData.xhtml#a6f48e1b037af7f441ccf2119bc5a3d21',·1,·'gmx::SettleData']]],
221 ····['usestringasmdpfile_158',·['usestringasmdpfile',·['../classgmx_1_1test_1_1SimulationRunner.xhtml#a75fa0a10a94033d78afcbbcb871df72d',·1,·'gmx::test::SimulationRunner::useStringAsMdpFile(const·char·*mdpString)'], 
222 ········['../classgmx_1_1test_1_1SimulationRunner.xhtml#accfb15b5d82dd09daa6b25b2e0c14846',·1,·'gmx::test::SimulationRunner::useStringAsMdpFile(const·std::string·&amp;mdpString)']221 ····['usestringasmdpfile_158',·['usestringasmdpfile',·['../classgmx_1_1test_1_1SimulationRunner.xhtml#accfb15b5d82dd09daa6b25b2e0c14846',·1,·'gmx::test::SimulationRunner::useStringAsMdpFile(const·std::string·&amp;mdpString)'],
 222 ········['../classgmx_1_1test_1_1SimulationRunner.xhtml#a75fa0a10a94033d78afcbbcb871df72d',·1,·'gmx::test::SimulationRunner::useStringAsMdpFile(const·char·*mdpString)']
223 ····]],223 ····]],
224 ····['usestringasndxfile_159',·['useStringAsNdxFile',·['../classgmx_1_1test_1_1SimulationRunner.xhtml#a4af0a2fa669b9b49dbe8e31baa96ab8c',·1,·'gmx::test::SimulationRunner']]],224 ····['usestringasndxfile_159',·['useStringAsNdxFile',·['../classgmx_1_1test_1_1SimulationRunner.xhtml#a4af0a2fa669b9b49dbe8e31baa96ab8c',·1,·'gmx::test::SimulationRunner']]],
225 ····['usetabulatedewaldcorr_160',·['useTabulatedEwaldCorr',·['../structNbnxm_1_1KernelBenchOptions.xhtml#a14fa358454fb18a2f9975cb463b9ffbd',·1,·'Nbnxm::KernelBenchOptions']]],225 ····['usetabulatedewaldcorr_160',·['useTabulatedEwaldCorr',·['../structNbnxm_1_1KernelBenchOptions.xhtml#a14fa358454fb18a2f9975cb463b9ffbd',·1,·'Nbnxm::KernelBenchOptions']]],
226 ····['usetiming_161',·['useTiming',·['../structPmeGpuSpecific.xhtml#ad6bbbf827e5b002605a8de3625eb4e46',·1,·'PmeGpuSpecific']]],226 ····['usetiming_161',·['useTiming',·['../structPmeGpuSpecific.xhtml#ad6bbbf827e5b002605a8de3625eb4e46',·1,·'PmeGpuSpecific']]],
227 ····['usetopg96andndxfromdatabase_162',·['useTopG96AndNdxFromDatabase',·['../classgmx_1_1test_1_1SimulationRunner.xhtml#acfd69f53927124bfdee2effd375fc9bd',·1,·'gmx::test::SimulationRunner']]],227 ····['usetopg96andndxfromdatabase_162',·['useTopG96AndNdxFromDatabase',·['../classgmx_1_1test_1_1SimulationRunner.xhtml#acfd69f53927124bfdee2effd375fc9bd',·1,·'gmx::test::SimulationRunner']]],
228 ····['usetopgroandmdpfromfeptestdatabase_163',·['useTopGroAndMdpFromFepTestDatabase',·['../classgmx_1_1test_1_1SimulationRunner.xhtml#a5c4e09317af5dad88cde39c19402fed3',·1,·'gmx::test::SimulationRunner']]],228 ····['usetopgroandmdpfromfeptestdatabase_163',·['useTopGroAndMdpFromFepTestDatabase',·['../classgmx_1_1test_1_1SimulationRunner.xhtml#a5c4e09317af5dad88cde39c19402fed3',·1,·'gmx::test::SimulationRunner']]],
229 ····['usetopgroandndxfromdatabase_164',·['useTopGroAndNdxFromDatabase',·['../classgmx_1_1test_1_1SimulationRunner.xhtml#aa46bb4573ffe549cc7f4ee67172d0594',·1,·'gmx::test::SimulationRunner']]],229 ····['usetopgroandndxfromdatabase_164',·['useTopGroAndNdxFromDatabase',·['../classgmx_1_1test_1_1SimulationRunner.xhtml#aa46bb4573ffe549cc7f4ee67172d0594',·1,·'gmx::test::SimulationRunner']]],
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Offset 360, 16 lines modifiedOffset 360, 16 lines modified
360 ········['../page_nbnxm.xhtml',·1,·'The·NxM·atom-cluster·non-bonded·algorithm'],360 ········['../page_nbnxm.xhtml',·1,·'The·NxM·atom-cluster·non-bonded·algorithm'],
361 ········['../page_modularsimulator.xhtml#autotoc_md14',·1,·'The·simulator·algorithm']361 ········['../page_modularsimulator.xhtml#autotoc_md14',·1,·'The·simulator·algorithm']
362 ····]],362 ····]],
363 ····['algorithm_20builder_221',·['Simulator·algorithm·builder',·['../page_modularsimulator.xhtml#autotoc_md38',·1,·'']]],363 ····['algorithm_20builder_221',·['Simulator·algorithm·builder',·['../page_modularsimulator.xhtml#autotoc_md38',·1,·'']]],
364 ····['align_5fstep_222',·['ALIGN_STEP',·['../mempool_8cpp.xhtml#a0cd40f06d30a789ea4b0a86f1bb08e20',·1,·'mempool.cpp']]],364 ····['align_5fstep_222',·['ALIGN_STEP',·['../mempool_8cpp.xhtml#a0cd40f06d30a789ea4b0a86f1bb08e20',·1,·'mempool.cpp']]],
365 ····['alignedallocationpolicy_223',·['AlignedAllocationPolicy',·['../classgmx_1_1AlignedAllocationPolicy.xhtml',·1,·'gmx']]],365 ····['alignedallocationpolicy_223',·['AlignedAllocationPolicy',·['../classgmx_1_1AlignedAllocationPolicy.xhtml',·1,·'gmx']]],
366 ····['alignedallocator_224',·['AlignedAllocator',·['../namespacegmx.xhtml#ac3ca6adcfda5170180c2140c7b2f9d47',·1,·'gmx']]],366 ····['alignedallocator_224',·['AlignedAllocator',·['../namespacegmx.xhtml#ac3ca6adcfda5170180c2140c7b2f9d47',·1,·'gmx']]],
367 ····['alignedallocator_2ecpp_225',·['alignedallocator.cpp',·['../alignedallocator_8cpp.xhtml',·1,·'(Global·Namespace)'],367 ····['alignedallocator_2ecpp_225',·['alignedallocator.cpp',·['../tests_2alignedallocator_8cpp.xhtml',·1,·'(Global·Namespace)'],
368 ········['../tests_2alignedallocator_8cpp.xhtml',·1,·'(Global·Namespace)']368 ········['../alignedallocator_8cpp.xhtml',·1,·'(Global·Namespace)']
369 ····]],369 ····]],
370 ····['alignedallocator_2eh_226',·['alignedallocator.h',·['../alignedallocator_8h.xhtml',·1,·'']]],370 ····['alignedallocator_2eh_226',·['alignedallocator.h',·['../alignedallocator_8h.xhtml',·1,·'']]],
371 ····['alignedallocator_5fimpl_2eh_227',·['alignedallocator_impl.h',·['../alignedallocator__impl_8h.xhtml',·1,·'']]],371 ····['alignedallocator_5fimpl_2eh_227',·['alignedallocator_impl.h',·['../alignedallocator__impl_8h.xhtml',·1,·'']]],
372 ····['alignedarray_3c_20double_2c_20n_20_3e_228',·['AlignedArray&lt;·double,·N·&gt;',·['../structgmx_1_1AlignedArray_3_01double_00_01N_01_4.xhtml',·1,·'gmx']]],372 ····['alignedarray_3c_20double_2c_20n_20_3e_228',·['AlignedArray&lt;·double,·N·&gt;',·['../structgmx_1_1AlignedArray_3_01double_00_01N_01_4.xhtml',·1,·'gmx']]],
373 ····['alignedarray_3c_20float_2c_20n_20_3e_229',·['AlignedArray&lt;·float,·N·&gt;',·['../structgmx_1_1AlignedArray_3_01float_00_01N_01_4.xhtml',·1,·'gmx']]],373 ····['alignedarray_3c_20float_2c_20n_20_3e_229',·['AlignedArray&lt;·float,·N·&gt;',·['../structgmx_1_1AlignedArray_3_01float_00_01N_01_4.xhtml',·1,·'gmx']]],
374 ····['alignedfreegeneric_230',·['alignedFreeGeneric',·['../namespacegmx_1_1anonymous__namespace_02alignedallocator_8cpp_03.xhtml#ac11fa1cae95de1d83f00000c40f0cfde',·1,·'gmx::anonymous_namespace{alignedallocator.cpp}']]],374 ····['alignedfreegeneric_230',·['alignedFreeGeneric',·['../namespacegmx_1_1anonymous__namespace_02alignedallocator_8cpp_03.xhtml#ac11fa1cae95de1d83f00000c40f0cfde',·1,·'gmx::anonymous_namespace{alignedallocator.cpp}']]],
375 ····['alignedmallocgeneric_231',·['alignedMallocGeneric',·['../namespacegmx_1_1anonymous__namespace_02alignedallocator_8cpp_03.xhtml#ad8983444d03b6578afb5e28f9ad8dfa8',·1,·'gmx::anonymous_namespace{alignedallocator.cpp}']]],375 ····['alignedmallocgeneric_231',·['alignedMallocGeneric',·['../namespacegmx_1_1anonymous__namespace_02alignedallocator_8cpp_03.xhtml#ad8983444d03b6578afb5e28f9ad8dfa8',·1,·'gmx::anonymous_namespace{alignedallocator.cpp}']]],
Offset 926, 55 lines modifiedOffset 926, 55 lines modified
926 ····['arrayrefwithpadding_2eh_560',·['arrayrefwithpadding.h',·['../arrayrefwithpadding_8h.xhtml',·1,·'']]],926 ····['arrayrefwithpadding_2eh_560',·['arrayrefwithpadding.h',·['../arrayrefwithpadding_8h.xhtml',·1,·'']]],
927 ····['arrayrefwithpadding_3c_20gmx_3a_3abasicvector_20_3e_561',·['ArrayRefWithPadding&lt;·gmx::BasicVector·&gt;',·['../classgmx_1_1ArrayRefWithPadding.xhtml',·1,·'gmx']]],927 ····['arrayrefwithpadding_3c_20gmx_3a_3abasicvector_20_3e_561',·['ArrayRefWithPadding&lt;·gmx::BasicVector·&gt;',·['../classgmx_1_1ArrayRefWithPadding.xhtml',·1,·'gmx']]],
928 ····['arraysize_2eh_562',·['arraysize.h',·['../arraysize_8h.xhtml',·1,·'']]],928 ····['arraysize_2eh_562',·['arraysize.h',·['../arraysize_8h.xhtml',·1,·'']]],
929 ····['arraytype_563',·['arrayType',·['../structgmx_1_1anonymous__namespace_02gpu__3dfft__sycl__rocfft_8cpp_03_1_1PlanSetupData.xhtml#a7181910d3a2d84f933fc2af816565630',·1,·'gmx::anonymous_namespace{gpu_3dfft_sycl_rocfft.cpp}::PlanSetupData']]],929 ····['arraytype_563',·['arrayType',·['../structgmx_1_1anonymous__namespace_02gpu__3dfft__sycl__rocfft_8cpp_03_1_1PlanSetupData.xhtml#a7181910d3a2d84f933fc2af816565630',·1,·'gmx::anonymous_namespace{gpu_3dfft_sycl_rocfft.cpp}::PlanSetupData']]],
930 ····['as_564',·['as',·['../structt__methoddata__same.xhtml#af3a9883e22ad8537171fccdf18e0d2b6',·1,·'t_methoddata_same']]],930 ····['as_564',·['as',·['../structt__methoddata__same.xhtml#af3a9883e22ad8537171fccdf18e0d2b6',·1,·'t_methoddata_same']]],
931 ····['as_20a_20library_565',·['Using·GROMACS·as·a·library',·['../page_usinglibrary.xhtml',·1,·'index']]],931 ····['as_20a_20library_565',·['Using·GROMACS·as·a·library',·['../page_usinglibrary.xhtml',·1,·'index']]],
932 ····['as_5fconst_566',·['as_const',·['../namespacegmx_1_1compat.xhtml#a59ff1adf811114dfb585be13017f6227',·1,·'gmx::compat']]],932 ····['as_5fconst_566',·['as_const',·['../namespacegmx_1_1compat.xhtml#a59ff1adf811114dfb585be13017f6227',·1,·'gmx::compat']]],
933 ····['as_5fdvec_5farray_567',·['as_dvec_array',·['../namespacegmx.xhtml#ac635996b6d78ada40405ba91310641f7',·1,·'gmx::as_dvec_array(DVec·*x)'], 
934 ········['../namespacegmx.xhtml#ab435e743af1b412558e429022580056b',·1,·'gmx::as_dvec_array(const·DVec·*x)']933 ····['as_5fdvec_5farray_567',·['as_dvec_array',·['../namespacegmx.xhtml#ab435e743af1b412558e429022580056b',·1,·'gmx::as_dvec_array(const·DVec·*x)'],
 934 ········['../namespacegmx.xhtml#ac635996b6d78ada40405ba91310641f7',·1,·'gmx::as_dvec_array(DVec·*x)']
935 ····]],935 ····]],
936 ····['as_5fivec_5farray_568',·['as_ivec_array',·['../namespacegmx.xhtml#ab7d47f82fdb0dceddb28d228ecc926f2',·1,·'gmx::as_ivec_array(IVec·*x)'],936 ····['as_5fivec_5farray_568',·['as_ivec_array',·['../namespacegmx.xhtml#ab7d47f82fdb0dceddb28d228ecc926f2',·1,·'gmx::as_ivec_array(IVec·*x)'],
937 ········['../namespacegmx.xhtml#a169687020d64e828f0120aa553c4240b',·1,·'gmx::as_ivec_array(const·IVec·*x)']937 ········['../namespacegmx.xhtml#a169687020d64e828f0120aa553c4240b',·1,·'gmx::as_ivec_array(const·IVec·*x)']
938 ····]],938 ····]],
939 ····['as_5frvec_5farray_569',·['as_rvec_array',·['../namespacegmx.xhtml#aede03a44c13df763bdd1d8d9d0887dda',·1,·'gmx::as_rvec_array(const·RVec·*x)'],939 ····['as_5frvec_5farray_569',·['as_rvec_array',·['../namespacegmx.xhtml#aede03a44c13df763bdd1d8d9d0887dda',·1,·'gmx::as_rvec_array(const·RVec·*x)'],
940 ········['../namespacegmx.xhtml#ac36e90ef229d4fc88ba16409aef0b759',·1,·'gmx::as_rvec_array(RVec·*x)']940 ········['../namespacegmx.xhtml#ac36e90ef229d4fc88ba16409aef0b759',·1,·'gmx::as_rvec_array(RVec·*x)']
941 ····]],941 ····]],
942 ····['as_5fs_5fsorted_570',·['as_s_sorted',·['../structt__methoddata__same.xhtml#a8e60d150d29d86b285a3e90c249f6b8e',·1,·'t_methoddata_same']]],942 ····['as_5fs_5fsorted_570',·['as_s_sorted',·['../structt__methoddata__same.xhtml#a8e60d150d29d86b285a3e90c249f6b8e',·1,·'t_methoddata_same']]],
943 ····['as_5fvec_571',·['as_vec',·['../classgmx_1_1BasicVector.xhtml#a5ed879b0c072cab9e58a9f4b1e346fae',·1,·'gmx::BasicVector::as_vec()'],943 ····['as_5fvec_571',·['as_vec',·['../classgmx_1_1BasicVector.xhtml#a5ed879b0c072cab9e58a9f4b1e346fae',·1,·'gmx::BasicVector::as_vec()'],
944 ········['../classgmx_1_1BasicVector.xhtml#ac498c7a8e21aefa0ddfbffe6e8824242',·1,·'gmx::BasicVector::as_vec()·const']944 ········['../classgmx_1_1BasicVector.xhtml#ac498c7a8e21aefa0ddfbffe6e8824242',·1,·'gmx::BasicVector::as_vec()·const']
945 ····]],945 ····]],
 946 ····['as_5fvec_5farray_572',·['as_vec_array',·['../namespacegmx.xhtml#adbccce10168efa3d28a2f7d3b644df37',·1,·'gmx::as_vec_array(BasicVector&lt;·ValueType·&gt;·*x)'],
946 ····['as_5fvec_5farray_572',·['as_vec_array',·['../namespacegmx.xhtml#af1a995d2d5d21983a662ab3e79e2b2e3',·1,·'gmx::as_vec_array(const·BasicVector&lt;·ValueType·&gt;·*x)'],947 ········['../namespacegmx.xhtml#af1a995d2d5d21983a662ab3e79e2b2e3',·1,·'gmx::as_vec_array(const·BasicVector&lt;·ValueType·&gt;·*x)']
947 ········['../namespacegmx.xhtml#adbccce10168efa3d28a2f7d3b644df37',·1,·'gmx::as_vec_array(BasicVector&lt;·ValueType·&gt;·*x)'] 
948 ····]],948 ····]],
949 ····['asabsolute_573',·['asAbsolute',·['../classgmx_1_1test_1_1FloatingPointDifference.xhtml#a1256c4a2e308cddc83601e72d07ea9ff',·1,·'gmx::test::FloatingPointDifference']]],949 ····['asabsolute_573',·['asAbsolute',·['../classgmx_1_1test_1_1FloatingPointDifference.xhtml#a1256c4a2e308cddc83601e72d07ea9ff',·1,·'gmx::test::FloatingPointDifference']]],
950 ····['asconstview_574',·['asConstView',·['../classgmx_1_1MultiDimArray.xhtml#a5dd95fca66f9da9723365d7bbe9df05a',·1,·'gmx::MultiDimArray']]],950 ····['asconstview_574',·['asConstView',·['../classgmx_1_1MultiDimArray.xhtml#a5dd95fca66f9da9723365d7bbe9df05a',·1,·'gmx::MultiDimArray']]],
951 ····['asgenericfloat3pointer_575',·['asgenericfloat3pointer',·['../namespacegmx.xhtml#a1b0b8846fcb8364fafd83a5592f12108',·1,·'gmx::asGenericFloat3Pointer(const·C·&amp;in)'],951 ····['asgenericfloat3pointer_575',·['asgenericfloat3pointer',·['../namespacegmx.xhtml#a7cf8c0c79ed50d630c676a108cff651e',·1,·'gmx::asGenericFloat3Pointer(T·*in)'],
952 ········['../namespacegmx.xhtml#a61d1fa4d0073e932d5ea53fd4ec968e9',·1,·'gmx::asGenericFloat3Pointer(C·&amp;in)'], 
953 ········['../namespacegmx.xhtml#a790f4239e154b040ddbcef4a1d3122ae',·1,·'gmx::asGenericFloat3Pointer(const·T·*in)'],952 ········['../namespacegmx.xhtml#a790f4239e154b040ddbcef4a1d3122ae',·1,·'gmx::asGenericFloat3Pointer(const·T·*in)'],
954 ········['../namespacegmx.xhtml#a7cf8c0c79ed50d630c676a108cff651e',·1,·'gmx::asGenericFloat3Pointer(T·*in)']953 ········['../namespacegmx.xhtml#a61d1fa4d0073e932d5ea53fd4ec968e9',·1,·'gmx::asGenericFloat3Pointer(C·&amp;in)'],
 954 ········['../namespacegmx.xhtml#a1b0b8846fcb8364fafd83a5592f12108',·1,·'gmx::asGenericFloat3Pointer(const·C·&amp;in)']
955 ····]],955 ····]],
 956 ····['asin_576',·['asin',·['../namespacegmx.xhtml#a3d5120df9c0bf437e64c806a7cfdad02',·1,·'gmx::asin(float·x)'],
956 ····['asin_576',·['asin',·['../namespacegmx.xhtml#ab02c7d47595f11074fbfedff40145544',·1,·'gmx::asin(double·x)'],957 ········['../namespacegmx.xhtml#ab02c7d47595f11074fbfedff40145544',·1,·'gmx::asin(double·x)']
957 ········['../namespacegmx.xhtml#a3d5120df9c0bf437e64c806a7cfdad02',·1,·'gmx::asin(float·x)'] 
958 ····]],958 ····]],
959 ····['asinsingleaccuracy_577',·['asinSingleAccuracy',·['../namespacegmx.xhtml#a98465e562d7b1b24755bc693db04c8f5',·1,·'gmx']]],959 ····['asinsingleaccuracy_577',·['asinSingleAccuracy',·['../namespacegmx.xhtml#a98465e562d7b1b24755bc693db04c8f5',·1,·'gmx']]],
960 ····['asize_578',·['asize',·['../group__module__utility.xhtml#ga2f549c8a29e4b43b862a96314a66a5fa',·1,·'arraysize.h']]],960 ····['asize_578',·['asize',·['../group__module__utility.xhtml#ga2f549c8a29e4b43b862a96314a66a5fa',·1,·'arraysize.h']]],
961 ····['asparagraph_579',·['asParagraph',·['../classgmx_1_1LogEntryWriter.xhtml#ae57916f6fea855c4e7cd33e35a7cf17b',·1,·'gmx::LogEntryWriter']]],961 ····['asparagraph_579',·['asParagraph',·['../classgmx_1_1LogEntryWriter.xhtml#ae57916f6fea855c4e7cd33e35a7cf17b',·1,·'gmx::LogEntryWriter']]],
962 ····['assert_5fdouble_5feq_5ftol_580',·['ASSERT_DOUBLE_EQ_TOL',·['../group__module__testutils.xhtml#ga010a2c949d35b7f815862bcbd6418ca0',·1,·'testasserts.h']]],962 ····['assert_5fdouble_5feq_5ftol_580',·['ASSERT_DOUBLE_EQ_TOL',·['../group__module__testutils.xhtml#ga010a2c949d35b7f815862bcbd6418ca0',·1,·'testasserts.h']]],
963 ····['assert_5ffloat_5feq_5ftol_581',·['ASSERT_FLOAT_EQ_TOL',·['../group__module__testutils.xhtml#ga8ee3a0884221d08e838d4e4c46708153',·1,·'testasserts.h']]],963 ····['assert_5ffloat_5feq_5ftol_581',·['ASSERT_FLOAT_EQ_TOL',·['../group__module__testutils.xhtml#ga8ee3a0884221d08e838d4e4c46708153',·1,·'testasserts.h']]],
964 ····['assert_5fno_5fthrow_5fgmx_582',·['ASSERT_NO_THROW_GMX',·['../group__module__testutils.xhtml#gafbd852cd87908495678c48118c02ee82',·1,·'testasserts.h']]],964 ····['assert_5fno_5fthrow_5fgmx_582',·['ASSERT_NO_THROW_GMX',·['../group__module__testutils.xhtml#gafbd852cd87908495678c48118c02ee82',·1,·'testasserts.h']]],
965 ····['assert_5fplain_583',·['ASSERT_PLAIN',·['../group__module__testutils.xhtml#ga97a0194de1d98402f697adee0fe39a98',·1,·'testasserts.h']]],965 ····['assert_5fplain_583',·['ASSERT_PLAIN',·['../group__module__testutils.xhtml#ga97a0194de1d98402f697adee0fe39a98',·1,·'testasserts.h']]],
966 ····['assert_5freal_5feq_584',·['ASSERT_REAL_EQ',·['../group__module__testutils.xhtml#gacb991b5a95254a4b350c2483fe115c0c',·1,·'testasserts.h']]],966 ····['assert_5freal_5feq_584',·['ASSERT_REAL_EQ',·['../group__module__testutils.xhtml#gacb991b5a95254a4b350c2483fe115c0c',·1,·'testasserts.h']]],
967 ····['assert_5freal_5feq_5ftol_585',·['ASSERT_REAL_EQ_TOL',·['../group__module__testutils.xhtml#ga6e4937301d5b94f07bb4d9fd71030555',·1,·'testasserts.h']]],967 ····['assert_5freal_5feq_5ftol_585',·['ASSERT_REAL_EQ_TOL',·['../group__module__testutils.xhtml#ga6e4937301d5b94f07bb4d9fd71030555',·1,·'testasserts.h']]],
968 ····['assert_5fthrow_5fgmx_586',·['ASSERT_THROW_GMX',·['../group__module__testutils.xhtml#ga5cd586713beef5aa3cf19b0ed2b3a269',·1,·'testasserts.h']]],968 ····['assert_5fthrow_5fgmx_586',·['ASSERT_THROW_GMX',·['../group__module__testutils.xhtml#ga5cd586713beef5aa3cf19b0ed2b3a269',·1,·'testasserts.h']]],
969 ····['assertequalwithintolerance_587',·['assertEqualWithinTolerance',·['../group__module__testutils.xhtml#ga2e6cf2631a7f8256a5a044685a702fbb',·1,·'gmx::test']]],969 ····['assertequalwithintolerance_587',·['assertEqualWithinTolerance',·['../group__module__testutils.xhtml#ga2e6cf2631a7f8256a5a044685a702fbb',·1,·'gmx::test']]],
970 ····['asserthandler_588',·['assertHandler',·['../group__module__utility.xhtml#gaebf12d5435f39db87d2627d024b0b4c1',·1,·'gmx::internal']]],970 ····['asserthandler_588',·['assertHandler',·['../group__module__utility.xhtml#gaebf12d5435f39db87d2627d024b0b4c1',·1,·'gmx::internal']]],
971 ····['assertisfinite_589',·['assertIsFinite',·['../namespaceanonymous__namespace_02pme__gpu__calculate__splines__sycl_8h_03.xhtml#a01adaa3129c0d24c51a16fe3d7594080',·1,·'anonymous_namespace{pme_gpu_calculate_splines_sycl.h}']]],971 ····['assertisfinite_589',·['assertIsFinite',·['../namespaceanonymous__namespace_02pme__gpu__calculate__splines__sycl_8h_03.xhtml#a01adaa3129c0d24c51a16fe3d7594080',·1,·'anonymous_namespace{pme_gpu_calculate_splines_sycl.h}']]],
972 ····['assertmatrixisboxmatrix_590',·['assertmatrixisboxmatrix',·['../namespacegmx.xhtml#afea352d4139af8d3c9211c87558f3ea4',·1,·'gmx::assertMatrixIsBoxMatrix(const·matrix·gmx_used_in_debug·m)'], 
973 ········['../namespacegmx.xhtml#a860abc953ac0d45b86cde64851c5a325',·1,·'gmx::assertMatrixIsBoxMatrix(const·Matrix3x3·gmx_used_in_debug·&amp;m)']972 ····['assertmatrixisboxmatrix_590',·['assertmatrixisboxmatrix',·['../namespacegmx.xhtml#a860abc953ac0d45b86cde64851c5a325',·1,·'gmx::assertMatrixIsBoxMatrix(const·Matrix3x3·gmx_used_in_debug·&amp;m)'],
 973 ········['../namespacegmx.xhtml#afea352d4139af8d3c9211c87558f3ea4',·1,·'gmx::assertMatrixIsBoxMatrix(const·matrix·gmx_used_in_debug·m)']
974 ····]],974 ····]],
975 ····['assign_591',·['assign',·['../classanonymous__namespace_02evaluate_8cpp_03_1_1SelelemTemporaryValueAssigner.xhtml#a5433286ec33653834971646e2324e229',·1,·'anonymous_namespace{evaluate.cpp}::SelelemTemporaryValueAssigner']]],975 ····['assign_591',·['assign',·['../classanonymous__namespace_02evaluate_8cpp_03_1_1SelelemTemporaryValueAssigner.xhtml#a5433286ec33653834971646e2324e229',·1,·'anonymous_namespace{evaluate.cpp}::SelelemTemporaryValueAssigner']]],
976 ····['assign_5fconstraint_592',·['assign_constraint',·['../namespacegmx.xhtml#a08027589d2d177a93f50a6c3a9d9b62c',·1,·'gmx']]],976 ····['assign_5fconstraint_592',·['assign_constraint',·['../namespacegmx.xhtml#a08027589d2d177a93f50a6c3a9d9b62c',·1,·'gmx']]],
977 ····['assign_5ffactors_593',·['assign_factors',·['../domdec__setup_8cpp.xhtml#ab2f91ff70e8d54be2e800abb1d5e6b9b',·1,·'domdec_setup.cpp']]],977 ····['assign_5ffactors_593',·['assign_factors',·['../domdec__setup_8cpp.xhtml#ab2f91ff70e8d54be2e800abb1d5e6b9b',·1,·'domdec_setup.cpp']]],
978 ····['assigner_5f_594',·['assigner_',·['../classgmx_1_1CommandLineParser_1_1Impl.xhtml#af0018d9353b05b23ec5889e079d1dc96',·1,·'gmx::CommandLineParser::Impl']]],978 ····['assigner_5f_594',·['assigner_',·['../classgmx_1_1CommandLineParser_1_1Impl.xhtml#af0018d9353b05b23ec5889e079d1dc96',·1,·'gmx::CommandLineParser::Impl']]],
979 ····['assigning_20simulation_20tasks_20to_20hardware_20taskassignment_595',·['Assigning·simulation·tasks·to·hardware·(taskassignment)',·['../group__module__taskassignment.xhtml',·1,·'']]],979 ····['assigning_20simulation_20tasks_20to_20hardware_20taskassignment_595',·['Assigning·simulation·tasks·to·hardware·(taskassignment)',·['../group__module__taskassignment.xhtml',·1,·'']]],
980 ····['assigninteractionsforatom_596',·['assignInteractionsForAtom',·['../localtopology_8cpp.xhtml#a65dbae5829571391c44c73ca42cba8fb',·1,·'localtopology.cpp']]],980 ····['assigninteractionsforatom_596',·['assignInteractionsForAtom',·['../localtopology_8cpp.xhtml#a65dbae5829571391c44c73ca42cba8fb',·1,·'localtopology.cpp']]],
Offset 983, 152 lines modifiedOffset 983, 152 lines modified
983 ····['assignpositionrestraintsforatom_599',·['assignPositionRestraintsForAtom',·['../localtopology_8cpp.xhtml#afb4fa529774cf67304776e604b9879fd',·1,·'localtopology.cpp']]],983 ····['assignpositionrestraintsforatom_599',·['assignPositionRestraintsForAtom',·['../localtopology_8cpp.xhtml#afb4fa529774cf67304776e604b9879fd',·1,·'localtopology.cpp']]],
984 ····['assignvsitestosingletask_600',·['assignVsitesToSingleTask',·['../namespacegmx.xhtml#a1eee8bc37f540f65a107fa21a102c09d',·1,·'gmx']]],984 ····['assignvsitestosingletask_600',·['assignVsitesToSingleTask',·['../namespacegmx.xhtml#a1eee8bc37f540f65a107fa21a102c09d',·1,·'gmx']]],
985 ····['assignvsitestothread_601',·['assignVsitesToThread',·['../namespacegmx.xhtml#a8ff9857961193a9bd5fbd1fb027ba44f',·1,·'gmx']]],985 ····['assignvsitestothread_601',·['assignVsitesToThread',·['../namespacegmx.xhtml#a8ff9857961193a9bd5fbd1fb027ba44f',·1,·'gmx']]],
986 ····['associativity_602',·['associativity',·['../structgmx_1_1HardwareTopology_1_1Cache.xhtml#ad5a56cc20c9ca27eb6276374e411a430',·1,·'gmx::HardwareTopology::Cache']]],986 ····['associativity_602',·['associativity',·['../structgmx_1_1HardwareTopology_1_1Cache.xhtml#ad5a56cc20c9ca27eb6276374e411a430',·1,·'gmx::HardwareTopology::Cache']]],
987 ····['asulps_603',·['asUlps',·['../classgmx_1_1test_1_1FloatingPointDifference.xhtml#a64f20cf7b256513aa8bdda6c142f7dae',·1,·'gmx::test::FloatingPointDifference']]],987 ····['asulps_603',·['asUlps',·['../classgmx_1_1test_1_1FloatingPointDifference.xhtml#a64f20cf7b256513aa8bdda6c142f7dae',·1,·'gmx::test::FloatingPointDifference']]],
988 ····['asview_604',·['asView',·['../classgmx_1_1MultiDimArray.xhtml#a23a1fb8f2c0045928c48ccb88ef85632',·1,·'gmx::MultiDimArray']]],988 ····['asview_604',·['asView',·['../classgmx_1_1MultiDimArray.xhtml#a23a1fb8f2c0045928c48ccb88ef85632',·1,·'gmx::MultiDimArray']]],
989 ····['async_605',·['Async',·['../gpu__utils_8h.xhtml#aed6d99acc2a7b8495f08fa2d9d2277eba24aa4117da86c41684ad25742832dfa6',·1,·'gpu_utils.h']]],989 ····['async_605',·['Async',·['../gpu__utils_8h.xhtml#aed6d99acc2a7b8495f08fa2d9d2277eba24aa4117da86c41684ad25742832dfa6',·1,·'gpu_utils.h']]],
990 ····['at_606',·['at',·['../classgmx_1_1FixedCapacityVector.xhtml#ad919bd7ae4e24f409c06e778c028848f',·1,·'gmx::FixedCapacityVector::at()'], 
991 ········['../classgmx_1_1ListOfLists.xhtml#a49d32c6ff1a5eca209be358475e05713',·1,·'gmx::ListOfLists::at()'],990 ····['at_606',·['at',·['../classgmx_1_1ListOfLists.xhtml#a49d32c6ff1a5eca209be358475e05713',·1,·'gmx::ListOfLists::at()'],
992 ········['../classgmx_1_1ArrayRef.xhtml#adc8ea4073c94eb246b0027c4bd7d01da',·1,·'gmx::ArrayRef::at()'],991 ········['../classgmx_1_1ArrayRef.xhtml#adc8ea4073c94eb246b0027c4bd7d01da',·1,·'gmx::ArrayRef::at()'],
993 ········['../classStringTable.xhtml#adcc938ba043e0c531773e64d87d00827',·1,·'StringTable::at()'],992 ········['../classStringTable.xhtml#adcc938ba043e0c531773e64d87d00827',·1,·'StringTable::at()'],
994 ········['../classgmx_1_1FixedCapacityVector.xhtml#a1e94e4306421c463379882e6fe3a99c7',·1,·'gmx::FixedCapacityVector::at()'],993 ········['../classgmx_1_1FixedCapacityVector.xhtml#a1e94e4306421c463379882e6fe3a99c7',·1,·'gmx::FixedCapacityVector::at(size_type·n)'],
 994 ········['../classgmx_1_1FixedCapacityVector.xhtml#ad919bd7ae4e24f409c06e778c028848f',·1,·'gmx::FixedCapacityVector::at(size_type·n)·const'],
995 ········['../classgmx_1_1EnergyFrame.xhtml#a73ace4971cafa88adaceea02aea4646e',·1,·'gmx::EnergyFrame::at()'],995 ········['../classgmx_1_1EnergyFrame.xhtml#a73ace4971cafa88adaceea02aea4646e',·1,·'gmx::EnergyFrame::at()'],
996 ········['../classgmx__ga2la__t.xhtml#ad8f304cbe18bbec9715f837fd1e2aa93',·1,·'gmx_ga2la_t::at()']996 ········['../classgmx__ga2la__t.xhtml#ad8f304cbe18bbec9715f837fd1e2aa93',·1,·'gmx_ga2la_t::at()']
997 ····]],997 ····]],
998 ····['at_5fend_607',·['at_end',·['../structgmx__domdec__specat__comm__t.xhtml#acfc1ad88275feb891d5eaf41e6fe31b6',·1,·'gmx_domdec_specat_comm_t']]],998 ····['at_5fend_607',·['at_end',·['../structgmx__domdec__specat__comm__t.xhtml#acfc1ad88275feb891d5eaf41e6fe31b6',·1,·'gmx_domdec_specat_comm_t']]],
999 ····['at_5fstart_608',·['at_start',·['../structgmx__domdec__specat__comm__t.xhtml#a55cac48fb79ab129c6e54ecd71b10d66',·1,·'gmx_domdec_specat_comm_t']]],999 ····['at_5fstart_608',·['at_start',·['../structgmx__domdec__specat__comm__t.xhtml#a55cac48fb79ab129c6e54ecd71b10d66',·1,·'gmx_domdec_specat_comm_t']]],
 1000 ····['atan_609',·['atan',·['../namespacegmx.xhtml#a1afbc2ada56f899a8d3dc5c61530e28b',·1,·'gmx::atan(float·x)'],
1000 ····['atan_609',·['atan',·['../namespacegmx.xhtml#af15e6f3962e035d69013bd91621fd9f8',·1,·'gmx::atan(double·x)'],1001 ········['../namespacegmx.xhtml#af15e6f3962e035d69013bd91621fd9f8',·1,·'gmx::atan(double·x)']
1001 ········['../namespacegmx.xhtml#a1afbc2ada56f899a8d3dc5c61530e28b',·1,·'gmx::atan(float·x)'] 
1002 ····]],1002 ····]],
 1003 ····['atan2_610',·['atan2',·['../namespacegmx.xhtml#aed8336a58abddcdb6afa7835138ecf46',·1,·'gmx::atan2(float·y,·float·x)'],
1003 ····['atan2_610',·['atan2',·['../namespacegmx.xhtml#aa70a1aa5e9c161a2770d0f9b7eca1805',·1,·'gmx::atan2(double·y,·double·x)'],1004 ········['../namespacegmx.xhtml#aa70a1aa5e9c161a2770d0f9b7eca1805',·1,·'gmx::atan2(double·y,·double·x)']
1004 ········['../namespacegmx.xhtml#aed8336a58abddcdb6afa7835138ecf46',·1,·'gmx::atan2(float·y,·float·x)'] 
1005 ····]],1005 ····]],
1006 ····['atan2singleaccuracy_611',·['atan2SingleAccuracy',·['../namespacegmx.xhtml#a2552094c1be29e087e1e85ae02fb0c7a',·1,·'gmx']]],1006 ····['atan2singleaccuracy_611',·['atan2SingleAccuracy',·['../namespacegmx.xhtml#a2552094c1be29e087e1e85ae02fb0c7a',·1,·'gmx']]],
1007 ····['atansingleaccuracy_612',·['atanSingleAccuracy',·['../namespacegmx.xhtml#a44ca54cb014d2f33b98f3d523d90a2f5',·1,·'gmx']]],1007 ····['atansingleaccuracy_612',·['atanSingleAccuracy',·['../namespacegmx.xhtml#a44ca54cb014d2f33b98f3d523d90a2f5',·1,·'gmx']]],
 1008 ····['atdat_613',·['atdat',·['../structNbnxmGpu.xhtml#a55c4477480d69b3adef9554a11706e33',·1,·'NbnxmGpu::atdat'],
1008 ····['atdat_613',·['atdat',·['../structNbnxm_1_1GpuTimers.xhtml#af1e4ecb3488687188047b14e1fc30d7b',·1,·'Nbnxm::GpuTimers::atdat'],1009 ········['../structNbnxm_1_1GpuTimers.xhtml#af1e4ecb3488687188047b14e1fc30d7b',·1,·'Nbnxm::GpuTimers::atdat']
1009 ········['../structNbnxmGpu.xhtml#a55c4477480d69b3adef9554a11706e33',·1,·'NbnxmGpu::atdat'] 
1010 ····]],1010 ····]],
1011 ····['atf_614',·['atf',·['../classgmx_1_1Lincs.xhtml#a0c17addba5fc06083dd777639123fbee',·1,·'gmx::Lincs']]],1011 ····['atf_614',·['atf',·['../classgmx_1_1Lincs.xhtml#a0c17addba5fc06083dd777639123fbee',·1,·'gmx::Lincs']]],
1012 ····['atnr_615',·['atnr',·['../structgmx__ffparams__t.xhtml#a0bbf906344980fc3d5af5872db5b8ff4',·1,·'gmx_ffparams_t']]],1012 ····['atnr_615',·['atnr',·['../structgmx__ffparams__t.xhtml#a0bbf906344980fc3d5af5872db5b8ff4',·1,·'gmx_ffparams_t']]],
1013 ····['atom_616',·['atom',·['../structPreprocessResidue.xhtml#acb4af191ced642266b5124549f2bb90e',·1,·'PreprocessResidue::atom'],1013 ····['atom_616',·['atom',·['../structgmx_1_1AtomIndex.xhtml#a86c46467c265c752b180d28dac63910e',·1,·'gmx::AtomIndex::atom'],
 1014 ········['../classAtomProxy.xhtml#a74dd8b9d35b876b3cf4a3b4a8e772cfc',·1,·'AtomProxy::atom()'],
1014 ········['../structMoleculePatch.xhtml#a1d1bc0e0e73fa1aed4ca493c981fb464',·1,·'MoleculePatch::atom'],1015 ········['../structMoleculePatch.xhtml#a1d1bc0e0e73fa1aed4ca493c981fb464',·1,·'MoleculePatch::atom'],
 1016 ········['../structPreprocessResidue.xhtml#acb4af191ced642266b5124549f2bb90e',·1,·'PreprocessResidue::atom']
1015 ········['../structgmx_1_1AtomIndex.xhtml#a86c46467c265c752b180d28dac63910e',·1,·'gmx::AtomIndex::atom'], 
1016 ········['../classAtomProxy.xhtml#a74dd8b9d35b876b3cf4a3b4a8e772cfc',·1,·'AtomProxy::atom()'] 
1017 ····]],1017 ····]],
1018 ····['atom_20cluster_20non_20bonded_20algorithm_617',·['The·NxM·atom-cluster·non-bonded·algorithm',·['../page_nbnxm.xhtml',·1,·'index']]],1018 ····['atom_20cluster_20non_20bonded_20algorithm_617',·['The·NxM·atom-cluster·non-bonded·algorithm',·['../page_nbnxm.xhtml',·1,·'index']]],
 1019 ····['atom1_618',·['atom1',·['../structVirtualSiteTopology_1_1VirtualSiteBond.xhtml#aa1b18c7a3742b0f0a0dc5c16c0fd4f63',·1,·'VirtualSiteTopology::VirtualSiteBond::atom1'],
1019 ····['atom1_618',·['atom1',·['../structVirtualSiteTopology_1_1VirtualSiteAngle.xhtml#af57ae380179f35813f7df5fbfc9974e6',·1,·'VirtualSiteTopology::VirtualSiteAngle::atom1'],1020 ········['../structVirtualSiteTopology_1_1VirtualSiteAngle.xhtml#af57ae380179f35813f7df5fbfc9974e6',·1,·'VirtualSiteTopology::VirtualSiteAngle::atom1']
1020 ········['../structVirtualSiteTopology_1_1VirtualSiteBond.xhtml#aa1b18c7a3742b0f0a0dc5c16c0fd4f63',·1,·'VirtualSiteTopology::VirtualSiteBond::atom1'] 
1021 ····]],1021 ····]],
1022 ····['atom2_619',·['atom2',·['../structVirtualSiteTopology_1_1VirtualSiteAngle.xhtml#a4e6b102e3e81587c06285605cadb6cf2',·1,·'VirtualSiteTopology::VirtualSiteAngle::atom2'],1022 ····['atom2_619',·['atom2',·['../structVirtualSiteTopology_1_1VirtualSiteAngle.xhtml#a4e6b102e3e81587c06285605cadb6cf2',·1,·'VirtualSiteTopology::VirtualSiteAngle::atom2'],
1023 ········['../structVirtualSiteTopology_1_1VirtualSiteBond.xhtml#ab9f07b4bfbc4fdfab7cb68c97b07d65f',·1,·'VirtualSiteTopology::VirtualSiteBond::atom2']1023 ········['../structVirtualSiteTopology_1_1VirtualSiteBond.xhtml#ab9f07b4bfbc4fdfab7cb68c97b07d65f',·1,·'VirtualSiteTopology::VirtualSiteBond::atom2']
1024 ····]],1024 ····]],
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Offset 125, 27 lines modifiedOffset 125, 27 lines modified
125 ····['bdebugmode_67',·['bDebugMode',·['../fatalerror_8h.xhtml#aeceaa87707ac5c2c96e224de90dd481c',·1,·'fatalerror.cpp']]],125 ····['bdebugmode_67',·['bDebugMode',·['../fatalerror_8h.xhtml#aeceaa87707ac5c2c96e224de90dd481c',·1,·'fatalerror.cpp']]],
126 ····['bdiscrete_68',·['bDiscrete',·['../structt__matrix.xhtml#a6ca5a8d5f5d4be235502f83ffac2586c',·1,·'t_matrix']]],126 ····['bdiscrete_68',·['bDiscrete',·['../structt__matrix.xhtml#a6ca5a8d5f5d4be235502f83ffac2586c',·1,·'t_matrix']]],
127 ····['bdotime_69',·['bDoTime',·['../structNbnxmGpu.xhtml#a1de4ad8bb7a72156331022911da91fb3',·1,·'NbnxmGpu']]],127 ····['bdotime_69',·['bDoTime',·['../structNbnxmGpu.xhtml#a1de4ad8bb7a72156331022911da91fb3',·1,·'NbnxmGpu']]],
128 ····['bdynamicbox_70',·['bDynamicBox',·['../structnbnxn__atomdata__t.xhtml#ae77b34a2c51cda08b6614469d056d29b',·1,·'nbnxn_atomdata_t']]],128 ····['bdynamicbox_70',·['bDynamicBox',·['../structnbnxn__atomdata__t.xhtml#ae77b34a2c51cda08b6614469d056d29b',·1,·'nbnxn_atomdata_t']]],
129 ····['becool_71',·['beCool',·['../namespacegmx_1_1anonymous__namespace_02coolstuff_8cpp_03.xhtml#a67229d8062fb466b5be7cb8bed125f1a',·1,·'gmx::anonymous_namespace{coolstuff.cpp}']]],129 ····['becool_71',·['beCool',·['../namespacegmx_1_1anonymous__namespace_02coolstuff_8cpp_03.xhtml#a67229d8062fb466b5be7cb8bed125f1a',·1,·'gmx::anonymous_namespace{coolstuff.cpp}']]],
130 ····['begin_72',·['begin',·['../classgmx_1_1FixedCapacityVector.xhtml#a453e4185086abe32f76359d79e5df439',·1,·'gmx::FixedCapacityVector::begin()'],130 ····['begin_72',·['begin',·['../classgmx_1_1FixedCapacityVector.xhtml#a453e4185086abe32f76359d79e5df439',·1,·'gmx::FixedCapacityVector::begin()'],
131 ········['../classgmx_1_1IntegerBox.xhtml#a4bdda1928d7845c8e5c5c3ef2918a466',·1,·'gmx::IntegerBox::begin()'],131 ········['../classgmx_1_1IntegerBox.xhtml#a4bdda1928d7845c8e5c5c3ef2918a466',·1,·'gmx::IntegerBox::begin()'],
132 ········['../namespacegmx.xhtml#a636719700df07fe8736fa19bb12c29dd',·1,·'gmx::begin(MultiDimArray&lt;·TContainer,·Extents·&gt;·&amp;multiDimArray)'], 
133 ········['../namespacegmx.xhtml#a9fd99e24e163158545296b3f791b0ee8',·1,·'gmx::begin(const·BasicMdspan·&amp;basicMdspan)'], 
134 ········['../namespacegmx.xhtml#aaf0716c8ca857b1a8877fc94463b5850',·1,·'gmx::begin(const·MultiDimArray&lt;·TContainer,·Extents·&gt;·&amp;multiDimArray)'], 
135 ········['../classgmx_1_1Range.xhtml#a242b3517477cdd07a73a702f360f5b46',·1,·'gmx::Range::begin()'], 
136 ········['../structgmx_1_1EnumerationArray.xhtml#a4a2f5be2695dfa8cbac551742c15d771',·1,·'gmx::EnumerationArray::begin()'], 
137 ········['../classgmx_1_1EnumerationWrapper.xhtml#abf496f9dcaab55be1b9cbe93f05312d9',·1,·'gmx::EnumerationWrapper::begin()'], 
138 ········['../classgmx_1_1ArrayRef.xhtml#a52348f625a07e17a873cf943882510f9',·1,·'gmx::ArrayRef::begin()'], 
139 ········['../classgmx_1_1FixedCapacityVector.xhtml#a93f0ea6236ab2cc8e924025646f8d87b',·1,·'gmx::FixedCapacityVector::begin()'], 
140 ········['../classgmx_1_1EnergyFrame.xhtml#a8c6171058dd1a26721f4af8df12b7a10',·1,·'gmx::EnergyFrame::begin()'], 
141 ········['../classgmx_1_1internal_1_1SimdArrayRef.xhtml#ab4801001dba830e69c9984d97e9c4932',·1,·'gmx::internal::SimdArrayRef::begin()'],132 ········['../classgmx_1_1internal_1_1SimdArrayRef.xhtml#ab4801001dba830e69c9984d97e9c4932',·1,·'gmx::internal::SimdArrayRef::begin()'],
142 ········['../classIListRange.xhtml#a7526befe10a07f17dbc35e704d01aeea',·1,·'IListRange::begin()'],133 ········['../namespacegmx.xhtml#aaf0716c8ca857b1a8877fc94463b5850',·1,·'gmx::begin()'],
143 ········['../classAtomRange.xhtml#afc17642be8cc592f6f47fdd9d86aa408',·1,·'AtomRange::begin()'],134 ········['../classAtomRange.xhtml#afc17642be8cc592f6f47fdd9d86aa408',·1,·'AtomRange::begin()'],
 135 ········['../classIListRange.xhtml#a7526befe10a07f17dbc35e704d01aeea',·1,·'IListRange::begin()'],
 136 ········['../namespacegmx.xhtml#a636719700df07fe8736fa19bb12c29dd',·1,·'gmx::begin()'],
 137 ········['../classgmx_1_1EnergyFrame.xhtml#a8c6171058dd1a26721f4af8df12b7a10',·1,·'gmx::EnergyFrame::begin()'],
 138 ········['../classgmx_1_1FixedCapacityVector.xhtml#a93f0ea6236ab2cc8e924025646f8d87b',·1,·'gmx::FixedCapacityVector::begin()'],
144 ········['../classgmx_1_1EnergyTerm.xhtml#a4b930e14cacc91c16a0c6e59fb48ea58',·1,·'gmx::EnergyTerm::begin()']139 ········['../classgmx_1_1EnergyTerm.xhtml#a4b930e14cacc91c16a0c6e59fb48ea58',·1,·'gmx::EnergyTerm::begin()'],
 140 ········['../classgmx_1_1ArrayRef.xhtml#a52348f625a07e17a873cf943882510f9',·1,·'gmx::ArrayRef::begin()'],
 141 ········['../classgmx_1_1EnumerationWrapper.xhtml#abf496f9dcaab55be1b9cbe93f05312d9',·1,·'gmx::EnumerationWrapper::begin()'],
 142 ········['../structgmx_1_1EnumerationArray.xhtml#a4a2f5be2695dfa8cbac551742c15d771',·1,·'gmx::EnumerationArray::begin()'],
 143 ········['../classgmx_1_1Range.xhtml#a242b3517477cdd07a73a702f360f5b46',·1,·'gmx::Range::begin()'],
 144 ········['../namespacegmx.xhtml#a9fd99e24e163158545296b3f791b0ee8',·1,·'gmx::begin()']
145 ····]],145 ····]],
146 ····['begin_5faction_73',·['BEGIN_ACTION',·['../parser__internal_8h.xhtml#adc0616ed62829750149da924ee4176a9',·1,·'parser_internal.h']]],146 ····['begin_5faction_73',·['BEGIN_ACTION',·['../parser__internal_8h.xhtml#adc0616ed62829750149da924ee4176a9',·1,·'parser_internal.h']]],
147 ····['beginiterator_74',·['beginIterator',·['../classgmx_1_1SelectionParserSymbolTable.xhtml#a6301d2be458f368de68f404d9dff17f7',·1,·'gmx::SelectionParserSymbolTable']]],147 ····['beginiterator_74',·['beginIterator',·['../classgmx_1_1SelectionParserSymbolTable.xhtml#a6301d2be458f368de68f404d9dff17f7',·1,·'gmx::SelectionParserSymbolTable']]],
148 ····['behaviorcollection_2ecpp_75',·['behaviorcollection.cpp',·['../behaviorcollection_8cpp.xhtml',·1,·'']]],148 ····['behaviorcollection_2ecpp_75',·['behaviorcollection.cpp',·['../behaviorcollection_8cpp.xhtml',·1,·'']]],
149 ····['behaviorcollection_2eh_76',·['behaviorcollection.h',·['../behaviorcollection_8h.xhtml',·1,·'']]],149 ····['behaviorcollection_2eh_76',·['behaviorcollection.h',·['../behaviorcollection_8h.xhtml',·1,·'']]],
150 ····['bench_77',·['bench',·['../namespaceNbnxm.xhtml#a94b5fe0aba252ce26a4cb2763c268980',·1,·'Nbnxm']]],150 ····['bench_77',·['bench',·['../namespaceNbnxm.xhtml#a94b5fe0aba252ce26a4cb2763c268980',·1,·'Nbnxm']]],
151 ····['bench_5fcoords_2eh_78',·['bench_coords.h',·['../bench__coords_8h.xhtml',·1,·'']]],151 ····['bench_5fcoords_2eh_78',·['bench_coords.h',·['../bench__coords_8h.xhtml',·1,·'']]],
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Offset 892, 38 lines modifiedOffset 892, 38 lines modified
892 ····['clusterdistancekerneltype_601',·['ClusterDistanceKernelType',·['../clusterdistancekerneltype_8h.xhtml#a6d74049ae6c72289649a7de671a92068',·1,·'clusterdistancekerneltype.h']]],892 ····['clusterdistancekerneltype_601',·['ClusterDistanceKernelType',·['../clusterdistancekerneltype_8h.xhtml#a6d74049ae6c72289649a7de671a92068',·1,·'clusterdistancekerneltype.h']]],
893 ····['clusterdistancekerneltype_2eh_602',·['clusterdistancekerneltype.h',·['../clusterdistancekerneltype_8h.xhtml',·1,·'']]],893 ····['clusterdistancekerneltype_2eh_602',·['clusterdistancekerneltype.h',·['../clusterdistancekerneltype_8h.xhtml',·1,·'']]],
894 ····['clusterflags_603',·['clusterFlags',·['../classNbnxm_1_1Grid.xhtml#a25b73d71c3c4250ca3f4940f16343cca',·1,·'Nbnxm::Grid']]],894 ····['clusterflags_603',·['clusterFlags',·['../classNbnxm_1_1Grid.xhtml#a25b73d71c3c4250ca3f4940f16343cca',·1,·'Nbnxm::Grid']]],
895 ····['clusterisperturbed_604',·['clusterIsPerturbed',·['../classNbnxm_1_1Grid.xhtml#a3bd7de7b1ee5ff89acfbc6971d520d98',·1,·'Nbnxm::Grid']]],895 ····['clusterisperturbed_604',·['clusterIsPerturbed',·['../classNbnxm_1_1Grid.xhtml#a3bd7de7b1ee5ff89acfbc6971d520d98',·1,·'Nbnxm::Grid']]],
896 ····['clusters_20of_20warps_605',·['of·packed·j·clusters·*·#·of·warps',·['../structNbnxm_1_1gpu__plist.xhtml#autotoc_md108',·1,·'']]],896 ····['clusters_20of_20warps_605',·['of·packed·j·clusters·*·#·of·warps',·['../structNbnxm_1_1gpu__plist.xhtml#autotoc_md108',·1,·'']]],
897 ····['clustsize_2ecpp_606',·['clustsize.cpp',·['../clustsize_8cpp.xhtml',·1,·'']]],897 ····['clustsize_2ecpp_606',·['clustsize.cpp',·['../clustsize_8cpp.xhtml',·1,·'']]],
898 ····['cmaincommandlinemodule_607',·['cmaincommandlinemodule',·['../classgmx_1_1anonymous__namespace_02cmdlinemodulemanager_8cpp_03_1_1CMainCommandLineModule.xhtml',·1,·'gmx::anonymous_namespace{cmdlinemodulemanager.cpp}::CMainCommandLineModule'],898 ····['cmaincommandlinemodule_607',·['cmaincommandlinemodule',·['../classgmx_1_1anonymous__namespace_02cmdlinemodulemanager_8cpp_03_1_1CMainCommandLineModule.xhtml',·1,·'gmx::anonymous_namespace{cmdlinemodulemanager.cpp}::CMainCommandLineModule'],
899 ········['../classgmx_1_1anonymous__namespace_02cmdlinemodulemanager_8cpp_03_1_1CMainCommandLineModule.xhtml#a6f18d9768b76bfe7baa2d7edded17697',·1,·'gmx::anonymous_namespace{cmdlinemodulemanager.cpp}::CMainCommandLineModule::CMainCommandLineModule(const·char·*name,·const·char·*shortDescription,·CMainFunction·mainFunction,·InitSettingsFunction·settingsFunction)']899 ········['../classgmx_1_1anonymous__namespace_02cmdlinemodulemanager_8cpp_03_1_1CMainCommandLineModule.xhtml#a6f18d9768b76bfe7baa2d7edded17697',·1,·'gmx::anonymous_namespace{cmdlinemodulemanager.cpp}::CMainCommandLineModule::CMainCommandLineModule()']
900 ····]],900 ····]],
 901 ····['cmainfunction_608',·['cmainfunction',·['../classgmx_1_1CommandLineModuleManager.xhtml#a68f43fb951aeecbeb60c81dd8701f921',·1,·'gmx::CommandLineModuleManager::CMainFunction'],
901 ····['cmainfunction_608',·['cmainfunction',·['../classgmx_1_1anonymous__namespace_02cmdlinemodulemanager_8cpp_03_1_1CMainCommandLineModule.xhtml#aa280311ece46f8039e8f85c4a4ab069a',·1,·'gmx::anonymous_namespace{cmdlinemodulemanager.cpp}::CMainCommandLineModule:[·...·truncated·by·diffoscope;·len:·17,·SHA:·18746c1cadb3aeaa35bdea7d11880e79575ac5b7cbbc95974b1a1fb87c8e725f·...·]902 ········['../classgmx_1_1anonymous__namespace_02cmdlinemodulemanager_8cpp_03_1_1CMainCommandLineModule.xhtml#aa280311ece46f8039e8f85c4a4ab069a',·1,·'gmx::anonymous_namespace{cmdlinemodulemanager.cpp}::CMainCommandLineModule::CMainFunction']
902 ········['../classgmx_1_1CommandLineModuleManager.xhtml#a68f43fb951aeecbeb60c81dd8701f921',·1,·'gmx::CommandLineModuleManager::CMainFunction'] 
903 ····]],903 ····]],
904 ····['cmake_20tt_20find_5fpackage_20gromacs_20tt_20details_609',·['CMake·&lt;tt&gt;find_package(GROMACS)&lt;/tt&gt;·details',·['../page_usinglibrary.xhtml#autotoc_md104',·1,·'']]],904 ····['cmake_20tt_20find_5fpackage_20gromacs_20tt_20details_609',·['CMake·&lt;tt&gt;find_package(GROMACS)&lt;/tt&gt;·details',·['../page_usinglibrary.xhtml#autotoc_md104',·1,·'']]],
905 ····['cmakegridspacing_610',·['cmakeGridSpacing',·['../structInteractionsOfType.xhtml#aa31e593a7781145976ce9a0dbeff4707',·1,·'InteractionsOfType']]],905 ····['cmakegridspacing_610',·['cmakeGridSpacing',·['../structInteractionsOfType.xhtml#aa31e593a7781145976ce9a0dbeff4707',·1,·'InteractionsOfType']]],
906 ····['cmap_611',·['cmap',·['../structInteractionsOfType.xhtml#a5f0efc5bc0b4fc4e1340124ba018be82',·1,·'InteractionsOfType']]],906 ····['cmap_611',·['cmap',·['../structInteractionsOfType.xhtml#a5f0efc5bc0b4fc4e1340124ba018be82',·1,·'InteractionsOfType']]],
907 ····['cmap_5fcoeff_5fmatrix_612',·['cmap_coeff_matrix',·['../namespaceanonymous__namespace_02bonded_8cpp_03.xhtml#a190c75eabdb2aee14d27ec1e104e40b4',·1,·'anonymous_namespace{bonded.cpp}']]],907 ····['cmap_5fcoeff_5fmatrix_612',·['cmap_coeff_matrix',·['../namespaceanonymous__namespace_02bonded_8cpp_03.xhtml#a190c75eabdb2aee14d27ec1e104e40b4',·1,·'anonymous_namespace{bonded.cpp}']]],
908 ····['cmap_5fdihs_613',·['cmap_dihs',·['../bonded_8h.xhtml#aa5ccd16bc6fca5281ec8404a2fb64037',·1,·'cmap_dihs(int·nbonds,·const·t_iatom·forceatoms[],·const·t_iparams·forceparams[],·const·gmx_cmap_t·*cmap_grid,·const·rvec·x[],·rvec4·f[],·rvec·fshift[],·const·struct·t_pbc·*pbc,·real·gmx_unused·lambda,·real·gmx_unused·*dvdlambda,·gmx::ArrayRef&lt;·const·real·&gt;,·t_fcdata·gmx_unused·*fcd,·t_disresdata·gmx_unused·*disresdata,·t_oriresdata·gmx_unused·*oriresdata,·int·gmx_unused·*global_atom_index):&#160;bonded.cpp'],908 ····['cmap_5fdihs_613',·['cmap_dihs',·['../bonded_8cpp.xhtml#aa5ccd16bc6fca5281ec8404a2fb64037',·1,·'cmap_dihs(int·nbonds,·const·t_iatom·forceatoms[],·const·t_iparams·forceparams[],·const·gmx_cmap_t·*cmap_grid,·const·rvec·x[],·rvec4·f[],·rvec·fshift[],·const·struct·t_pbc·*pbc,·real·gmx_unused·lambda,·real·gmx_unused·*dvdlambda,·gmx::ArrayRef&lt;·const·real·&gt;,·t_fcdata·gmx_unused·*fcd,·t_disresdata·gmx_unused·*disresdata,·t_oriresdata·gmx_unused·*oriresdata,·int·gmx_unused·*global_atom_index):&#160;bonded.cpp'],
909 ········['../bonded_8cpp.xhtml#aa5ccd16bc6fca5281ec8404a2fb64037',·1,·'cmap_dihs(int·nbonds,·const·t_iatom·forceatoms[],·const·t_iparams·forceparams[],·const·gmx_cmap_t·*cmap_grid,·const·rvec·x[],·rvec4·f[],·rvec·fshift[],·const·struct·t_pbc·*pbc,·real·gmx_unused·lambda,·real·gmx_unused·*dvdlambda,·gmx::ArrayRef&lt;·const·real·&gt;,·t_fcdata·gmx_unused·*fcd,·t_disresdata·gmx_unused·*disresdata,·t_oriresdata·gmx_unused·*oriresdata,·int·gmx_unused·*global_atom_index):&#160;bonded.cpp']909 ········['../bonded_8h.xhtml#aa5ccd16bc6fca5281ec8404a2fb64037',·1,·'cmap_dihs(int·nbonds,·const·t_iatom·forceatoms[],·const·t_iparams·forceparams[],·const·gmx_cmap_t·*cmap_grid,·const·rvec·x[],·rvec4·f[],·rvec·fshift[],·const·struct·t_pbc·*pbc,·real·gmx_unused·lambda,·real·gmx_unused·*dvdlambda,·gmx::ArrayRef&lt;·const·real·&gt;,·t_fcdata·gmx_unused·*fcd,·t_disresdata·gmx_unused·*disresdata,·t_oriresdata·gmx_unused·*oriresdata,·int·gmx_unused·*global_atom_index):&#160;bonded.cpp']
910 ····]],910 ····]],
911 ····['cmap_5fgrid_614',·['cmap_grid',·['../structgmx__ffparams__t.xhtml#ac2e74e19f8bfd1f20b5bba03606e8784',·1,·'gmx_ffparams_t']]],911 ····['cmap_5fgrid_614',·['cmap_grid',·['../structgmx__ffparams__t.xhtml#ac2e74e19f8bfd1f20b5bba03606e8784',·1,·'gmx_ffparams_t']]],
912 ····['cmap_5fsetup_5fgrid_5findex_615',·['cmap_setup_grid_index',·['../namespaceanonymous__namespace_02bonded_8cpp_03.xhtml#ab633656da7c571ef07545dc40d63e57c',·1,·'anonymous_namespace{bonded.cpp}']]],912 ····['cmap_5fsetup_5fgrid_5findex_615',·['cmap_setup_grid_index',·['../namespaceanonymous__namespace_02bonded_8cpp_03.xhtml#ab633656da7c571ef07545dc40d63e57c',·1,·'anonymous_namespace{bonded.cpp}']]],
913 ····['cmapangles_616',·['cmapAngles',·['../structInteractionsOfType.xhtml#af6f6506e959d239c2ca71de66cfbd3a0',·1,·'InteractionsOfType']]],913 ····['cmapangles_616',·['cmapAngles',·['../structInteractionsOfType.xhtml#af6f6506e959d239c2ca71de66cfbd3a0',·1,·'InteractionsOfType']]],
914 ····['cmapatomtypes_617',·['cmapAtomTypes',·['../structInteractionsOfType.xhtml#a6bded5f13e80427d245ffd81766e75b6',·1,·'InteractionsOfType']]],914 ····['cmapatomtypes_617',·['cmapAtomTypes',·['../structInteractionsOfType.xhtml#a6bded5f13e80427d245ffd81766e75b6',·1,·'InteractionsOfType']]],
915 ····['cmdlinehelpcontext_2ecpp_618',·['cmdlinehelpcontext.cpp',·['../cmdlinehelpcontext_8cpp.xhtml',·1,·'']]],915 ····['cmdlinehelpcontext_2ecpp_618',·['cmdlinehelpcontext.cpp',·['../cmdlinehelpcontext_8cpp.xhtml',·1,·'']]],
916 ····['cmdlinehelpcontext_2eh_619',·['cmdlinehelpcontext.h',·['../cmdlinehelpcontext_8h.xhtml',·1,·'']]],916 ····['cmdlinehelpcontext_2eh_619',·['cmdlinehelpcontext.h',·['../cmdlinehelpcontext_8h.xhtml',·1,·'']]],
917 ····['cmdlinehelpmodule_2ecpp_620',·['cmdlinehelpmodule.cpp',·['../tests_2cmdlinehelpmodule_8cpp.xhtml',·1,·'(Global·Namespace)'],917 ····['cmdlinehelpmodule_2ecpp_620',·['cmdlinehelpmodule.cpp',·['../tests_2cmdlinehelpmodule_8cpp.xhtml',·1,·'(Global·Namespace)'],
918 ········['../cmdlinehelpmodule_8cpp.xhtml',·1,·'(Global·Namespace)']918 ········['../cmdlinehelpmodule_8cpp.xhtml',·1,·'(Global·Namespace)']
919 ····]],919 ····]],
920 ····['cmdlinehelpmodule_2eh_621',·['cmdlinehelpmodule.h',·['../cmdlinehelpmodule_8h.xhtml',·1,·'']]],920 ····['cmdlinehelpmodule_2eh_621',·['cmdlinehelpmodule.h',·['../cmdlinehelpmodule_8h.xhtml',·1,·'']]],
921 ····['cmdlinehelpwriter_2ecpp_622',·['cmdlinehelpwriter.cpp',·['../cmdlinehelpwriter_8cpp.xhtml',·1,·'(Global·Namespace)'],921 ····['cmdlinehelpwriter_2ecpp_622',·['cmdlinehelpwriter.cpp',·['../tests_2cmdlinehelpwriter_8cpp.xhtml',·1,·'(Global·Namespace)'],
922 ········['../tests_2cmdlinehelpwriter_8cpp.xhtml',·1,·'(Global·Namespace)']922 ········['../cmdlinehelpwriter_8cpp.xhtml',·1,·'(Global·Namespace)']
923 ····]],923 ····]],
924 ····['cmdlinehelpwriter_2eh_623',·['cmdlinehelpwriter.h',·['../cmdlinehelpwriter_8h.xhtml',·1,·'']]],924 ····['cmdlinehelpwriter_2eh_623',·['cmdlinehelpwriter.h',·['../cmdlinehelpwriter_8h.xhtml',·1,·'']]],
925 ····['cmdlineinit_2ecpp_624',·['cmdlineinit.cpp',·['../cmdlineinit_8cpp.xhtml',·1,·'']]],925 ····['cmdlineinit_2ecpp_624',·['cmdlineinit.cpp',·['../cmdlineinit_8cpp.xhtml',·1,·'']]],
926 ····['cmdlineinit_2eh_625',·['cmdlineinit.h',·['../cmdlineinit_8h.xhtml',·1,·'']]],926 ····['cmdlineinit_2eh_625',·['cmdlineinit.h',·['../cmdlineinit_8h.xhtml',·1,·'']]],
927 ····['cmdlinemodule_2ecpp_626',·['cmdlinemodule.cpp',·['../cmdlinemodule_8cpp.xhtml',·1,·'']]],927 ····['cmdlinemodule_2ecpp_626',·['cmdlinemodule.cpp',·['../cmdlinemodule_8cpp.xhtml',·1,·'']]],
928 ····['cmdlinemodule_2eh_627',·['cmdlinemodule.h',·['../cmdlinemodule_8h.xhtml',·1,·'']]],928 ····['cmdlinemodule_2eh_627',·['cmdlinemodule.h',·['../cmdlinemodule_8h.xhtml',·1,·'']]],
929 ····['cmdlinemodulemanager_2ecpp_628',·['cmdlinemodulemanager.cpp',·['../cmdlinemodulemanager_8cpp.xhtml',·1,·'(Global·Namespace)'],929 ····['cmdlinemodulemanager_2ecpp_628',·['cmdlinemodulemanager.cpp',·['../cmdlinemodulemanager_8cpp.xhtml',·1,·'(Global·Namespace)'],
Offset 931, 20 lines modifiedOffset 931, 20 lines modified
931 ····]],931 ····]],
932 ····['cmdlinemodulemanager_2eh_629',·['cmdlinemodulemanager.h',·['../cmdlinemodulemanager_8h.xhtml',·1,·'']]],932 ····['cmdlinemodulemanager_2eh_629',·['cmdlinemodulemanager.h',·['../cmdlinemodulemanager_8h.xhtml',·1,·'']]],
933 ····['cmdlinemodulemanager_5fimpl_2eh_630',·['cmdlinemodulemanager_impl.h',·['../cmdlinemodulemanager__impl_8h.xhtml',·1,·'']]],933 ····['cmdlinemodulemanager_5fimpl_2eh_630',·['cmdlinemodulemanager_impl.h',·['../cmdlinemodulemanager__impl_8h.xhtml',·1,·'']]],
934 ····['cmdlinemodulemanagertest_2ecpp_631',·['cmdlinemodulemanagertest.cpp',·['../cmdlinemodulemanagertest_8cpp.xhtml',·1,·'']]],934 ····['cmdlinemodulemanagertest_2ecpp_631',·['cmdlinemodulemanagertest.cpp',·['../cmdlinemodulemanagertest_8cpp.xhtml',·1,·'']]],
935 ····['cmdlinemodulemanagertest_2eh_632',·['cmdlinemodulemanagertest.h',·['../cmdlinemodulemanagertest_8h.xhtml',·1,·'']]],935 ····['cmdlinemodulemanagertest_2eh_632',·['cmdlinemodulemanagertest.h',·['../cmdlinemodulemanagertest_8h.xhtml',·1,·'']]],
936 ····['cmdlineoptionsmodule_2ecpp_633',·['cmdlineoptionsmodule.cpp',·['../cmdlineoptionsmodule_8cpp.xhtml',·1,·'']]],936 ····['cmdlineoptionsmodule_2ecpp_633',·['cmdlineoptionsmodule.cpp',·['../cmdlineoptionsmodule_8cpp.xhtml',·1,·'']]],
937 ····['cmdlineoptionsmodule_2eh_634',·['cmdlineoptionsmodule.h',·['../cmdlineoptionsmodule_8h.xhtml',·1,·'']]],937 ····['cmdlineoptionsmodule_2eh_634',·['cmdlineoptionsmodule.h',·['../cmdlineoptionsmodule_8h.xhtml',·1,·'']]],
938 ····['cmdlineparser_2ecpp_635',·['cmdlineparser.cpp',·['../cmdlineparser_8cpp.xhtml',·1,·'(Global·Namespace)'],938 ····['cmdlineparser_2ecpp_635',·['cmdlineparser.cpp',·['../tests_2cmdlineparser_8cpp.xhtml',·1,·'(Global·Namespace)'],
939 ········['../tests_2cmdlineparser_8cpp.xhtml',·1,·'(Global·Namespace)']939 ········['../cmdlineparser_8cpp.xhtml',·1,·'(Global·Namespace)']
940 ····]],940 ····]],
941 ····['cmdlineparser_2eh_636',·['cmdlineparser.h',·['../cmdlineparser_8h.xhtml',·1,·'']]],941 ····['cmdlineparser_2eh_636',·['cmdlineparser.h',·['../cmdlineparser_8h.xhtml',·1,·'']]],
942 ····['cmdlineprogramcontext_2ecpp_637',·['cmdlineprogramcontext.cpp',·['../tests_2cmdlineprogramcontext_8cpp.xhtml',·1,·'(Global·Namespace)'],942 ····['cmdlineprogramcontext_2ecpp_637',·['cmdlineprogramcontext.cpp',·['../cmdlineprogramcontext_8cpp.xhtml',·1,·'(Global·Namespace)'],
943 ········['../cmdlineprogramcontext_8cpp.xhtml',·1,·'(Global·Namespace)']943 ········['../tests_2cmdlineprogramcontext_8cpp.xhtml',·1,·'(Global·Namespace)']
944 ····]],944 ····]],
945 ····['cmdlineprogramcontext_2eh_638',·['cmdlineprogramcontext.h',·['../cmdlineprogramcontext_8h.xhtml',·1,·'']]],945 ····['cmdlineprogramcontext_2eh_638',·['cmdlineprogramcontext.h',·['../cmdlineprogramcontext_8h.xhtml',·1,·'']]],
946 ····['cmdlinerunner_2ecpp_639',·['cmdlinerunner.cpp',·['../cmdlinerunner_8cpp.xhtml',·1,·'(Global·Namespace)'],946 ····['cmdlinerunner_2ecpp_639',·['cmdlinerunner.cpp',·['../cmdlinerunner_8cpp.xhtml',·1,·'(Global·Namespace)'],
947 ········['../tests_2cmdlinerunner_8cpp.xhtml',·1,·'(Global·Namespace)']947 ········['../tests_2cmdlinerunner_8cpp.xhtml',·1,·'(Global·Namespace)']
948 ····]],948 ····]],
949 ····['cmdlinerunner_2eh_640',·['cmdlinerunner.h',·['../cmdlinerunner_8h.xhtml',·1,·'']]],949 ····['cmdlinerunner_2eh_640',·['cmdlinerunner.h',·['../cmdlinerunner_8h.xhtml',·1,·'']]],
950 ····['cmdlinetest_2ecpp_641',·['cmdlinetest.cpp',·['../cmdlinetest_8cpp.xhtml',·1,·'']]],950 ····['cmdlinetest_2ecpp_641',·['cmdlinetest.cpp',·['../cmdlinetest_8cpp.xhtml',·1,·'']]],
Offset 1022, 24 lines modifiedOffset 1022, 24 lines modified
1022 ····['colvarsatomcoords_695',·['colvarsAtomCoords',·['../classgmx_1_1ColvarsOptions.xhtml#a698f69c97138efa82e6dcbe5c46cab83',·1,·'gmx::ColvarsOptions']]],1022 ····['colvarsatomcoords_695',·['colvarsAtomCoords',·['../classgmx_1_1ColvarsOptions.xhtml#a698f69c97138efa82e6dcbe5c46cab83',·1,·'gmx::ColvarsOptions']]],
1023 ····['colvarsconfigcontent_696',·['colvarsConfigContent',·['../classgmx_1_1ColvarsOptions.xhtml#a2f4da1bfb7f70104ae4e0f04326f4c92',·1,·'gmx::ColvarsOptions']]],1023 ····['colvarsconfigcontent_696',·['colvarsConfigContent',·['../classgmx_1_1ColvarsOptions.xhtml#a2f4da1bfb7f70104ae4e0f04326f4c92',·1,·'gmx::ColvarsOptions']]],
1024 ····['colvarsenstemp_697',·['colvarsEnsTemp',·['../classgmx_1_1ColvarsOptions.xhtml#acef601dd026f99cc9903101d4a55a063',·1,·'gmx::ColvarsOptions']]],1024 ····['colvarsenstemp_697',·['colvarsEnsTemp',·['../classgmx_1_1ColvarsOptions.xhtml#acef601dd026f99cc9903101d4a55a063',·1,·'gmx::ColvarsOptions']]],
1025 ····['colvarsfilename_698',·['colvarsFileName',·['../classgmx_1_1ColvarsOptions.xhtml#a492a802e8110c023183b24816e1e9c63',·1,·'gmx::ColvarsOptions']]],1025 ····['colvarsfilename_698',·['colvarsFileName',·['../classgmx_1_1ColvarsOptions.xhtml#a492a802e8110c023183b24816e1e9c63',·1,·'gmx::ColvarsOptions']]],
1026 ····['colvarsforceprovider_699',·['colvarsforceprovider',·['../classgmx_1_1ColvarsForceProvider.xhtml',·1,·'gmx::ColvarsForceProvider'],1026 ····['colvarsforceprovider_699',·['colvarsforceprovider',·['../classgmx_1_1ColvarsForceProvider.xhtml',·1,·'gmx::ColvarsForceProvider'],
1027 ········['../classgmx_1_1ColvarsForceProvider.xhtml#add1f95555cf0f9dd402fd5abe94dcbb6',·1,·'gmx::ColvarsForceProvider::ColvarsForceProvider()']1027 ········['../classgmx_1_1ColvarsForceProvider.xhtml#add1f95555cf0f9dd402fd5abe94dcbb6',·1,·'gmx::ColvarsForceProvider::ColvarsForceProvider()']
1028 ····]],1028 ····]],
1029 ····['colvarsforceprovider_2ecpp_700',·['colvarsforceprovider.cpp',·['../tests_2colvarsforceprovider_8cpp.xhtml',·1,·'(Global·Namespace)'],1029 ····['colvarsforceprovider_2ecpp_700',·['colvarsforceprovider.cpp',·['../colvarsforceprovider_8cpp.xhtml',·1,·'(Global·Namespace)'],
1030 ········['../colvarsforceprovider_8cpp.xhtml',·1,·'(Global·Namespace)']1030 ········['../tests_2colvarsforceprovider_8cpp.xhtml',·1,·'(Global·Namespace)']
1031 ····]],1031 ····]],
1032 ····['colvarsforceprovider_2eh_701',·['colvarsforceprovider.h',·['../colvarsforceprovider_8h.xhtml',·1,·'']]],1032 ····['colvarsforceprovider_2eh_701',·['colvarsforceprovider.h',·['../colvarsforceprovider_8h.xhtml',·1,·'']]],
1033 ····['colvarsforceproviderstate_702',·['ColvarsForceProviderState',·['../structgmx_1_1ColvarsForceProviderState.xhtml',·1,·'gmx']]],1033 ····['colvarsforceproviderstate_702',·['ColvarsForceProviderState',·['../structgmx_1_1ColvarsForceProviderState.xhtml',·1,·'gmx']]],
1034 ····['colvarsinputfiles_703',·['colvarsInputFiles',·['../classgmx_1_1ColvarsOptions.xhtml#acfb0cbd2024f2402f55d5b24b4135f68',·1,·'gmx::ColvarsOptions']]],1034 ····['colvarsinputfiles_703',·['colvarsInputFiles',·['../classgmx_1_1ColvarsOptions.xhtml#acfb0cbd2024f2402f55d5b24b4135f68',·1,·'gmx::ColvarsOptions']]],
 1035 ····['colvarsmdmodule_704',·['colvarsmdmodule',·['../classgmx_1_1anonymous__namespace_02colvarsMDModule_8cpp_03_1_1ColvarsMDModule.xhtml',·1,·'gmx::anonymous_namespace{colvarsMDModule.cpp}::ColvarsMDModule'],
1035 ····['colvarsmdmodule_704',·['colvarsmdmodule',·['../classgmx_1_1anonymous__namespace_02colvarsMDModule_8cpp_03_1_1ColvarsMDModule.xhtml#a0fc853db647af0d2368102ecc62d15b0',·1,·'gmx::anonymous_namespace{colvarsMDModule.cpp}::ColvarsMDModule::ColvarsMDModule()'],1036 ········['../classgmx_1_1anonymous__namespace_02colvarsMDModule_8cpp_03_1_1ColvarsMDModule.xhtml#a0fc853db647af0d2368102ecc62d15b0',·1,·'gmx::anonymous_namespace{colvarsMDModule.cpp}::ColvarsMDModule::ColvarsMDModule()'],
1036 ········['../classgmx_1_1anonymous__namespace_02colvarsMDModule__stub_8cpp_03_1_1ColvarsMDModule.xhtml#abde6a2f4c59d909cf0bfccc9952c914f',·1,·'gmx::anonymous_namespace{colvarsMDModule_stub.cpp}::ColvarsMDModule::ColvarsMDModule()'],1037 ········['../classgmx_1_1anonymous__namespace_02colvarsMDModule__stub_8cpp_03_1_1ColvarsMDModule.xhtml#abde6a2f4c59d909cf0bfccc9952c914f',·1,·'gmx::anonymous_namespace{colvarsMDModule_stub.cpp}::ColvarsMDModule::ColvarsMDModule()'],
1037 ········['../classgmx_1_1anonymous__namespace_02colvarsMDModule__stub_8cpp_03_1_1ColvarsMDModule.xhtml',·1,·'gmx::anonymous_namespace{colvarsMDModule_stub.cpp}::ColvarsMDModule'],1038 ········['../classgmx_1_1anonymous__namespace_02colvarsMDModule__stub_8cpp_03_1_1ColvarsMDModule.xhtml',·1,·'gmx::anonymous_namespace{colvarsMDModule_stub.cpp}::ColvarsMDModule']
1038 ········['../classgmx_1_1anonymous__namespace_02colvarsMDModule_8cpp_03_1_1ColvarsMDModule.xhtml',·1,·'gmx::anonymous_namespace{colvarsMDModule.cpp}::ColvarsMDModule'] 
1039 ····]],1039 ····]],
1040 ····['colvarsmdmodule_2ecpp_705',·['colvarsMDModule.cpp',·['../colvarsMDModule_8cpp.xhtml',·1,·'']]],1040 ····['colvarsmdmodule_2ecpp_705',·['colvarsMDModule.cpp',·['../colvarsMDModule_8cpp.xhtml',·1,·'']]],
1041 ····['colvarsmdmodule_2eh_706',·['colvarsMDModule.h',·['../colvarsMDModule_8h.xhtml',·1,·'']]],1041 ····['colvarsmdmodule_2eh_706',·['colvarsMDModule.h',·['../colvarsMDModule_8h.xhtml',·1,·'']]],
1042 ····['colvarsmdmodule_5fstub_2ecpp_707',·['colvarsMDModule_stub.cpp',·['../colvarsMDModule__stub_8cpp.xhtml',·1,·'']]],1042 ····['colvarsmdmodule_5fstub_2ecpp_707',·['colvarsMDModule_stub.cpp',·['../colvarsMDModule__stub_8cpp.xhtml',·1,·'']]],
1043 ····['colvarsmdptransformfromstring_708',·['colvarsMdpTransformFromString',·['../namespacegmx_1_1anonymous__namespace_02colvarsoptions_8cpp_03.xhtml#a56fb5108ef86a957d566d6fb2c8a8aa5',·1,·'gmx::anonymous_namespace{colvarsoptions.cpp}']]],1043 ····['colvarsmdptransformfromstring_708',·['colvarsMdpTransformFromString',·['../namespacegmx_1_1anonymous__namespace_02colvarsoptions_8cpp_03.xhtml#a56fb5108ef86a957d566d6fb2c8a8aa5',·1,·'gmx::anonymous_namespace{colvarsoptions.cpp}']]],
1044 ····['colvarsmoduleinfo_709',·['ColvarsModuleInfo',·['../structgmx_1_1ColvarsModuleInfo.xhtml',·1,·'gmx']]],1044 ····['colvarsmoduleinfo_709',·['ColvarsModuleInfo',·['../structgmx_1_1ColvarsModuleInfo.xhtml',·1,·'gmx']]],
1045 ····['colvarsoptions_710',·['ColvarsOptions',·['../classgmx_1_1ColvarsOptions.xhtml',·1,·'gmx']]],1045 ····['colvarsoptions_710',·['ColvarsOptions',·['../classgmx_1_1ColvarsOptions.xhtml',·1,·'gmx']]],
Offset 1721, 16 lines modifiedOffset 1721, 16 lines modified
1721 ····]],1721 ····]],
1722 ····['cpathseparator_1126',·['cPathSeparator',·['../namespaceanonymous__namespace_02path_8cpp_03.xhtml#aed15e473d695a5ef57fb6a8bfffc6f6e',·1,·'anonymous_namespace{path.cpp}']]],1722 ····['cpathseparator_1126',·['cPathSeparator',·['../namespaceanonymous__namespace_02path_8cpp_03.xhtml#aed15e473d695a5ef57fb6a8bfffc6f6e',·1,·'anonymous_namespace{path.cpp}']]],
1723 ····['cprev_1127',·['Cprev',·['../structt__bb.xhtml#a749999610903f9c2549749129930b9bf',·1,·'t_bb']]],1723 ····['cprev_1127',·['Cprev',·['../structt__bb.xhtml#a749999610903f9c2549749129930b9bf',·1,·'t_bb']]],
1724 ····['cpu_1128',·['cpu',·['../namespacegmx_1_1test.xhtml#a12502ff6638f23aeff85ad081f6a0a1ca2b55387dd066c5bac646ac61543d152d',·1,·'gmx::test::CPU'],1724 ····['cpu_1128',·['cpu',·['../namespacegmx_1_1test.xhtml#a12502ff6638f23aeff85ad081f6a0a1ca2b55387dd066c5bac646ac61543d152d',·1,·'gmx::test::CPU'],
1725 ········['../pme_8h.xhtml#adc082ed1af9a4868af13352373ed3791a2b55387dd066c5bac646ac61543d152d',·1,·'CPU:&#160;pme.h']1725 ········['../pme_8h.xhtml#adc082ed1af9a4868af13352373ed3791a2b55387dd066c5bac646ac61543d152d',·1,·'CPU:&#160;pme.h']
1726 ····]],1726 ····]],
1727 ····['cpuinfo_1129',·['CpuInfo',·['../classgmx_1_1CpuInfo.xhtml',·1,·'gmx']]],1727 ····['cpuinfo_1129',·['CpuInfo',·['../classgmx_1_1CpuInfo.xhtml',·1,·'gmx']]],
1728 ····['cpuinfo_2ecpp_1130',·['cpuinfo.cpp',·['../cpuinfo_8cpp.xhtml',·1,·'(Global·Namespace)'],1728 ····['cpuinfo_2ecpp_1130',·['cpuinfo.cpp',·['../tests_2cpuinfo_8cpp.xhtml',·1,·'(Global·Namespace)'],
1729 ········['../tests_2cpuinfo_8cpp.xhtml',·1,·'(Global·Namespace)']1729 ········['../cpuinfo_8cpp.xhtml',·1,·'(Global·Namespace)']
1730 ····]],1730 ····]],
1731 ····['cpuinfo_2eh_1131',·['cpuinfo.h',·['../cpuinfo_8h.xhtml',·1,·'']]],1731 ····['cpuinfo_2eh_1131',·['cpuinfo.h',·['../cpuinfo_8h.xhtml',·1,·'']]],
1732 ····['cpuisamdzen1_1132',·['cpuIsAmdZen1',·['../namespacegmx.xhtml#ae327244ad8efdb365d8005ae7536e45c',·1,·'gmx']]],1732 ····['cpuisamdzen1_1132',·['cpuIsAmdZen1',·['../namespacegmx.xhtml#ae327244ad8efdb365d8005ae7536e45c',·1,·'gmx']]],
1733 ····['cpuisx86nehalem_1133',·['cpuIsX86Nehalem',·['../namespacegmx.xhtml#af536d7a23a442f3c0876b05ac20d7d40',·1,·'gmx']]],1733 ····['cpuisx86nehalem_1133',·['cpuIsX86Nehalem',·['../namespacegmx.xhtml#af536d7a23a442f3c0876b05ac20d7d40',·1,·'gmx']]],
1734 ····['cpulimit_1134',·['cpuLimit',·['../classgmx_1_1HardwareTopology.xhtml#ae1bae645b3bf0e7562c3c006a57874a0',·1,·'gmx::HardwareTopology']]],1734 ····['cpulimit_1134',·['cpuLimit',·['../classgmx_1_1HardwareTopology.xhtml#ae1bae645b3bf0e7562c3c006a57874a0',·1,·'gmx::HardwareTopology']]],
1735 ····['cpulists_1135',·['cpuLists',·['../classPairlistSet.xhtml#ae032f887739e1540add0e12d9f720bb5',·1,·'PairlistSet']]],1735 ····['cpulists_1135',·['cpuLists',·['../classPairlistSet.xhtml#ae032f887739e1540add0e12d9f720bb5',·1,·'PairlistSet']]],
1736 ····['cpuplainc_1136',·['CpuPlainC',·['../clusterdistancekerneltype_8h.xhtml#a6d74049ae6c72289649a7de671a92068ad93b32814b8714c619ced160ce30692e',·1,·'clusterdistancekerneltype.h']]],1736 ····['cpuplainc_1136',·['CpuPlainC',·['../clusterdistancekerneltype_8h.xhtml#a6d74049ae6c72289649a7de671a92068ad93b32814b8714c619ced160ce30692e',·1,·'clusterdistancekerneltype.h']]],
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Offset 430, 26 lines modifiedOffset 430, 26 lines modified
430 ····['densityfit_2eh_266',·['densityfit.h',·['../densityfit_8h.xhtml',·1,·'']]],430 ····['densityfit_2eh_266',·['densityfit.h',·['../densityfit_8h.xhtml',·1,·'']]],
431 ····['densityfitting_267',·['densityfitting',·['../classgmx_1_1anonymous__namespace_02densityfitting_8cpp_03_1_1DensityFitting.xhtml#aa9839e3720a234577932dd8d647294c7',·1,·'gmx::anonymous_namespace{densityfitting.cpp}::DensityFitting::DensityFitting()'],431 ····['densityfitting_267',·['densityfitting',·['../classgmx_1_1anonymous__namespace_02densityfitting_8cpp_03_1_1DensityFitting.xhtml#aa9839e3720a234577932dd8d647294c7',·1,·'gmx::anonymous_namespace{densityfitting.cpp}::DensityFitting::DensityFitting()'],
432 ········['../classgmx_1_1anonymous__namespace_02densityfitting_8cpp_03_1_1DensityFitting.xhtml',·1,·'gmx::anonymous_namespace{densityfitting.cpp}::DensityFitting']432 ········['../classgmx_1_1anonymous__namespace_02densityfitting_8cpp_03_1_1DensityFitting.xhtml',·1,·'gmx::anonymous_namespace{densityfitting.cpp}::DensityFitting']
433 ····]],433 ····]],
434 ····['densityfitting_2ecpp_268',·['densityfitting.cpp',·['../densityfitting_8cpp.xhtml',·1,·'(Global·Namespace)'],434 ····['densityfitting_2ecpp_268',·['densityfitting.cpp',·['../densityfitting_8cpp.xhtml',·1,·'(Global·Namespace)'],
435 ········['../tests_2densityfitting_8cpp.xhtml',·1,·'(Global·Namespace)']435 ········['../tests_2densityfitting_8cpp.xhtml',·1,·'(Global·Namespace)']
436 ····]],436 ····]],
437 ····['densityfittingamplitudelookup_269',·['densityfittingamplitudelookup',·['../classgmx_1_1DensityFittingAmplitudeLookup.xhtml#aa1d2f04d8d7aae3d5622cd859a201cbb',·1,·'gmx::DensityFittingAmplitudeLookup::DensityFittingAmplitudeLookup(const·DensityFittingAmplitudeLookup·&amp;other)'],437 ····['densityfittingamplitudelookup_269',·['densityfittingamplitudelookup',·['../classgmx_1_1DensityFittingAmplitudeLookup.xhtml#aa1d2f04d8d7aae3d5622cd859a201cbb',·1,·'gmx::DensityFittingAmplitudeLookup::DensityFittingAmplitudeLookup()'],
438 ········['../classgmx_1_1DensityFittingAmplitudeLookup.xhtml#ab390de4a90d3b122cc6d54862bfc158f',·1,·'gmx::DensityFittingAmplitudeLookup::DensityFittingAmplitudeLookup(DensityFittingAmplitudeLookup·&amp;&amp;other)·noexcept'], 
439 ········['../classgmx_1_1DensityFittingAmplitudeLookup.xhtml',·1,·'gmx::DensityFittingAmplitudeLookup'],438 ········['../classgmx_1_1DensityFittingAmplitudeLookup.xhtml',·1,·'gmx::DensityFittingAmplitudeLookup'],
440 ········['../classgmx_1_1DensityFittingAmplitudeLookup.xhtml#a59fc899181bcc2e39969fa553087444d',·1,·'gmx::DensityFittingAmplitudeLookup::DensityFittingAmplitudeLookup()']439 ········['../classgmx_1_1DensityFittingAmplitudeLookup.xhtml#a59fc899181bcc2e39969fa553087444d',·1,·'gmx::DensityFittingAmplitudeLookup::DensityFittingAmplitudeLookup(const·DensityFittingAmplitudeMethod·&amp;method)'],
 440 ········['../classgmx_1_1DensityFittingAmplitudeLookup.xhtml#ab390de4a90d3b122cc6d54862bfc158f',·1,·'gmx::DensityFittingAmplitudeLookup::DensityFittingAmplitudeLookup(DensityFittingAmplitudeLookup·&amp;&amp;other)·noexcept']
441 ····]],441 ····]],
442 ····['densityfittingamplitudelookup_2ecpp_270',·['densityfittingamplitudelookup.cpp',·['../tests_2densityfittingamplitudelookup_8cpp.xhtml',·1,·'(Global·Namespace)'],442 ····['densityfittingamplitudelookup_2ecpp_270',·['densityfittingamplitudelookup.cpp',·['../tests_2densityfittingamplitudelookup_8cpp.xhtml',·1,·'(Global·Namespace)'],
443 ········['../densityfittingamplitudelookup_8cpp.xhtml',·1,·'(Global·Namespace)']443 ········['../densityfittingamplitudelookup_8cpp.xhtml',·1,·'(Global·Namespace)']
444 ····]],444 ····]],
445 ····['densityfittingamplitudelookup_2eh_271',·['densityfittingamplitudelookup.h',·['../densityfittingamplitudelookup_8h.xhtml',·1,·'']]],445 ····['densityfittingamplitudelookup_2eh_271',·['densityfittingamplitudelookup.h',·['../densityfittingamplitudelookup_8h.xhtml',·1,·'']]],
446 ····['densityfittingamplitudemethod_272',·['DensityFittingAmplitudeMethod',·['../namespacegmx.xhtml#ab0ad78613a262a1d4fcce5d18525099f',·1,·'gmx']]],446 ····['densityfittingamplitudemethod_272',·['DensityFittingAmplitudeMethod',·['../namespacegmx.xhtml#ab0ad78613a262a1d4fcce5d18525099f',·1,·'gmx']]],
 447 ····['densityfittingforce_273',·['densityfittingforce',·['../classgmx_1_1DensityFittingForce.xhtml#a4515397cbc5ab594e8e9066302e02eca',·1,·'gmx::DensityFittingForce::DensityFittingForce(const·DensityFittingForce·&amp;other)'],
447 ····['densityfittingforce_273',·['densityfittingforce',·['../classgmx_1_1DensityFittingForce.xhtml#a3eab6d07afa82b211179207e74072ff0',·1,·'gmx::DensityFittingForce::DensityFittingForce(DensityFittingForce·&amp;&amp;other)·noexcept'],448 ········['../classgmx_1_1DensityFittingForce.xhtml#a3eab6d07afa82b211179207e74072ff0',·1,·'gmx::DensityFittingForce::DensityFittingForce(DensityFittingForce·&amp;&amp;other)·noexcept'],
448 ········['../classgmx_1_1DensityFittingForce.xhtml#a4515397cbc5ab594e8e9066302e02eca',·1,·'gmx::DensityFittingForce::DensityFittingForce(const·DensityFittingForce·&amp;other)'], 
449 ········['../classgmx_1_1DensityFittingForce.xhtml#acf7150b3a47e6878c27e70500c221d4a',·1,·'gmx::DensityFittingForce::DensityFittingForce(const·GaussianSpreadKernelParameters::Shape·&amp;kernelShapeParameters)'],449 ········['../classgmx_1_1DensityFittingForce.xhtml#acf7150b3a47e6878c27e70500c221d4a',·1,·'gmx::DensityFittingForce::DensityFittingForce(const·GaussianSpreadKernelParameters::Shape·&amp;kernelShapeParameters)'],
450 ········['../classgmx_1_1DensityFittingForce.xhtml',·1,·'gmx::DensityFittingForce']450 ········['../classgmx_1_1DensityFittingForce.xhtml',·1,·'gmx::DensityFittingForce']
451 ····]],451 ····]],
452 ····['densityfittingforce_2ecpp_274',·['densityfittingforce.cpp',·['../densityfittingforce_8cpp.xhtml',·1,·'(Global·Namespace)'],452 ····['densityfittingforce_2ecpp_274',·['densityfittingforce.cpp',·['../densityfittingforce_8cpp.xhtml',·1,·'(Global·Namespace)'],
453 ········['../tests_2densityfittingforce_8cpp.xhtml',·1,·'(Global·Namespace)']453 ········['../tests_2densityfittingforce_8cpp.xhtml',·1,·'(Global·Namespace)']
454 ····]],454 ····]],
455 ····['densityfittingforce_2eh_275',·['densityfittingforce.h',·['../densityfittingforce_8h.xhtml',·1,·'']]],455 ····['densityfittingforce_2eh_275',·['densityfittingforce.h',·['../densityfittingforce_8h.xhtml',·1,·'']]],
Offset 566, 16 lines modifiedOffset 566, 16 lines modified
566 ····['device_5fcontext_2eh_342',·['device_context.h',·['../device__context_8h.xhtml',·1,·'']]],566 ····['device_5fcontext_2eh_342',·['device_context.h',·['../device__context_8h.xhtml',·1,·'']]],
567 ····['device_5fcontext_5focl_2ecpp_343',·['device_context_ocl.cpp',·['../device__context__ocl_8cpp.xhtml',·1,·'']]],567 ····['device_5fcontext_5focl_2ecpp_343',·['device_context_ocl.cpp',·['../device__context__ocl_8cpp.xhtml',·1,·'']]],
568 ····['device_5fcontext_5fsycl_2ecpp_344',·['device_context_sycl.cpp',·['../device__context__sycl_8cpp.xhtml',·1,·'']]],568 ····['device_5fcontext_5fsycl_2ecpp_344',·['device_context_sycl.cpp',·['../device__context__sycl_8cpp.xhtml',·1,·'']]],
569 ····['device_5fevent_2eh_345',·['device_event.h',·['../device__event_8h.xhtml',·1,·'']]],569 ····['device_5fevent_2eh_345',·['device_event.h',·['../device__event_8h.xhtml',·1,·'']]],
570 ····['device_5fevent_5focl_2eh_346',·['device_event_ocl.h',·['../device__event__ocl_8h.xhtml',·1,·'']]],570 ····['device_5fevent_5focl_2eh_346',·['device_event_ocl.h',·['../device__event__ocl_8h.xhtml',·1,·'']]],
571 ····['device_5fevent_5fsycl_2eh_347',·['device_event_sycl.h',·['../device__event__sycl_8h.xhtml',·1,·'']]],571 ····['device_5fevent_5fsycl_2eh_347',·['device_event_sycl.h',·['../device__event__sycl_8h.xhtml',·1,·'']]],
572 ····['device_5finformation_2eh_348',·['device_information.h',·['../device__information_8h.xhtml',·1,·'']]],572 ····['device_5finformation_2eh_348',·['device_information.h',·['../device__information_8h.xhtml',·1,·'']]],
573 ····['device_5fmanagement_2ecpp_349',·['device_management.cpp',·['../device__management_8cpp.xhtml',·1,·'(Global·Namespace)'],573 ····['device_5fmanagement_2ecpp_349',·['device_management.cpp',·['../tests_2device__management_8cpp.xhtml',·1,·'(Global·Namespace)'],
574 ········['../tests_2device__management_8cpp.xhtml',·1,·'(Global·Namespace)']574 ········['../device__management_8cpp.xhtml',·1,·'(Global·Namespace)']
575 ····]],575 ····]],
576 ····['device_5fmanagement_2eh_350',·['device_management.h',·['../device__management_8h.xhtml',·1,·'']]],576 ····['device_5fmanagement_2eh_350',·['device_management.h',·['../device__management_8h.xhtml',·1,·'']]],
577 ····['device_5fmanagement_5fcommon_2ecpp_351',·['device_management_common.cpp',·['../device__management__common_8cpp.xhtml',·1,·'']]],577 ····['device_5fmanagement_5fcommon_2ecpp_351',·['device_management_common.cpp',·['../device__management__common_8cpp.xhtml',·1,·'']]],
578 ····['device_5fmanagement_5focl_2ecpp_352',·['device_management_ocl.cpp',·['../device__management__ocl_8cpp.xhtml',·1,·'']]],578 ····['device_5fmanagement_5focl_2ecpp_352',·['device_management_ocl.cpp',·['../device__management__ocl_8cpp.xhtml',·1,·'']]],
579 ····['device_5fmanagement_5fsycl_2ecpp_353',·['device_management_sycl.cpp',·['../device__management__sycl_8cpp.xhtml',·1,·'']]],579 ····['device_5fmanagement_5fsycl_2ecpp_353',·['device_management_sycl.cpp',·['../device__management__sycl_8cpp.xhtml',·1,·'']]],
580 ····['device_5fmanagement_5fsycl_5fintel_5fdevice_5fids_2ecpp_354',·['device_management_sycl_intel_device_ids.cpp',·['../device__management__sycl__intel__device__ids_8cpp.xhtml',·1,·'']]],580 ····['device_5fmanagement_5fsycl_5fintel_5fdevice_5fids_2ecpp_354',·['device_management_sycl_intel_device_ids.cpp',·['../device__management__sycl__intel__device__ids_8cpp.xhtml',·1,·'']]],
581 ····['device_5fmanagement_5fsycl_5fintel_5fdevice_5fids_2eh_355',·['device_management_sycl_intel_device_ids.h',·['../device__management__sycl__intel__device__ids_8h.xhtml',·1,·'']]],581 ····['device_5fmanagement_5fsycl_5fintel_5fdevice_5fids_2eh_355',·['device_management_sycl_intel_device_ids.h',·['../device__management__sycl__intel__device__ids_8h.xhtml',·1,·'']]],
Offset 612, 26 lines modifiedOffset 612, 26 lines modified
612 ····['deviceinfolist_5f_377',·['deviceInfoList_',·['../structgmx_1_1DeviceDetectionResult.xhtml#a70ea01a606765254475f43b92a678218',·1,·'gmx::DeviceDetectionResult']]],612 ····['deviceinfolist_5f_377',·['deviceInfoList_',·['../structgmx_1_1DeviceDetectionResult.xhtml#a70ea01a606765254475f43b92a678218',·1,·'gmx::DeviceDetectionResult']]],
613 ····['deviceinformation_378',·['DeviceInformation',·['../structDeviceInformation.xhtml',·1,·'']]],613 ····['deviceinformation_378',·['DeviceInformation',·['../structDeviceInformation.xhtml',·1,·'']]],
614 ····['devicenottargeted_379',·['DeviceNotTargeted',·['../device__information_8h.xhtml#a0b85af2bfbb9599409b639e98717c888ae0a8f15beccf0777dc0db7d1596b1e02',·1,·'device_information.h']]],614 ····['devicenottargeted_379',·['DeviceNotTargeted',·['../device__information_8h.xhtml#a0b85af2bfbb9599409b639e98717c888ae0a8f15beccf0777dc0db7d1596b1e02',·1,·'device_information.h']]],
615 ····['devices_380',·['devices',·['../structgmx_1_1HardwareTopology_1_1Machine.xhtml#a2e5f16d9ac9b2a7e020450a8bbde0c67',·1,·'gmx::HardwareTopology::Machine']]],615 ····['devices_380',·['devices',·['../structgmx_1_1HardwareTopology_1_1Machine.xhtml#a2e5f16d9ac9b2a7e020450a8bbde0c67',·1,·'gmx::HardwareTopology::Machine']]],
616 ····['devicesselectedbyuser_381',·['devicesSelectedByUser',·['../structgmx__hw__opt__t.xhtml#afcd054472cdb483614394e44d8526ac2',·1,·'gmx_hw_opt_t']]],616 ····['devicesselectedbyuser_381',·['devicesSelectedByUser',·['../structgmx__hw__opt__t.xhtml#afcd054472cdb483614394e44d8526ac2',·1,·'gmx_hw_opt_t']]],
617 ····['devicestatus_382',·['DeviceStatus',·['../device__information_8h.xhtml#a0b85af2bfbb9599409b639e98717c888',·1,·'device_information.h']]],617 ····['devicestatus_382',·['DeviceStatus',·['../device__information_8h.xhtml#a0b85af2bfbb9599409b639e98717c888',·1,·'device_information.h']]],
618 ····['devicestream_383',·['devicestream',·['../classDeviceStream.xhtml',·1,·'DeviceStream'],618 ····['devicestream_383',·['devicestream',·['../classDeviceStream.xhtml',·1,·'DeviceStream'],
 619 ········['../classDeviceStream.xhtml#acec1cd32716673fce69738e57e3b4ccb',·1,·'DeviceStream::DeviceStream()'],
619 ········['../classgmx_1_1test_1_1TestDevice.xhtml#afa7d5d2194cded2f8d2717fe85eb47de',·1,·'gmx::test::TestDevice::deviceStream()'],620 ········['../classgmx_1_1test_1_1TestDevice.xhtml#afa7d5d2194cded2f8d2717fe85eb47de',·1,·'gmx::test::TestDevice::deviceStream()']
620 ········['../classDeviceStream.xhtml#acec1cd32716673fce69738e57e3b4ccb',·1,·'DeviceStream::DeviceStream()'] 
621 ····]],621 ····]],
622 ····['devicestreammanager_384',·['devicestreammanager',·['../classgmx_1_1DeviceStreamManager.xhtml#af4af89575a6d318fe0d107f74df07122',·1,·'gmx::DeviceStreamManager::DeviceStreamManager()'],622 ····['devicestreammanager_384',·['devicestreammanager',·['../classgmx_1_1DeviceStreamManager.xhtml#af4af89575a6d318fe0d107f74df07122',·1,·'gmx::DeviceStreamManager::DeviceStreamManager()'],
623 ········['../classgmx_1_1DeviceStreamManager.xhtml',·1,·'gmx::DeviceStreamManager']623 ········['../classgmx_1_1DeviceStreamManager.xhtml',·1,·'gmx::DeviceStreamManager']
624 ····]],624 ····]],
625 ····['devicestreammanagertest_385',·['DeviceStreamManagerTest',·['../classgmx_1_1test_1_1anonymous__namespace_02device__stream__manager_8cpp_03_1_1DeviceStreamManagerTest.xhtml',·1,·'gmx::test::anonymous_namespace{device_stream_manager.cpp}']]],625 ····['devicestreammanagertest_385',·['DeviceStreamManagerTest',·['../classgmx_1_1test_1_1anonymous__namespace_02device__stream__manager_8cpp_03_1_1DeviceStreamManagerTest.xhtml',·1,·'gmx::test::anonymous_namespace{device_stream_manager.cpp}']]],
626 ····['devicestreampriority_386',·['DeviceStreamPriority',·['../device__stream_8h.xhtml#a745c3a25d092600ae45b68d7e73d8319',·1,·'device_stream.h']]],626 ····['devicestreampriority_386',·['DeviceStreamPriority',·['../device__stream_8h.xhtml#a745c3a25d092600ae45b68d7e73d8319',·1,·'device_stream.h']]],
627 ····['devicestreams_387',·['deviceStreams',·['../structNbnxmGpu.xhtml#ad744a8ed17f666335812b98b2dd6091d',·1,·'NbnxmGpu']]],627 ····['devicestreams_387',·['deviceStreams',·['../structNbnxmGpu.xhtml#ad744a8ed17f666335812b98b2dd6091d',·1,·'NbnxmGpu']]],
628 ····['devicestreamtype_388',·['DeviceStreamType',·['../namespacegmx.xhtml#a90e1f148d98685136b343e0a20d3c2e5',·1,·'gmx']]],628 ····['devicestreamtype_388',·['DeviceStreamType',·['../namespacegmx.xhtml#a90e1f148d98685136b343e0a20d3c2e5',·1,·'gmx']]],
629 ····['devicetexture_389',·['devicetexture',·['../gputraits__sycl_8h.xhtml#a960fcf6fb2fa8586385940071cfaa2fa',·1,·'DeviceTexture:&#160;gputraits_sycl.h'],629 ····['devicetexture_389',·['devicetexture',·['../devicebuffer__ocl_8h.xhtml#a960fcf6fb2fa8586385940071cfaa2fa',·1,·'DeviceTexture:&#160;devicebuffer_ocl.h'],
630 ········['../devicebuffer__ocl_8h.xhtml#a960fcf6fb2fa8586385940071cfaa2fa',·1,·'DeviceTexture:&#160;devicebuffer_ocl.h']630 ········['../gputraits__sycl_8h.xhtml#a960fcf6fb2fa8586385940071cfaa2fa',·1,·'DeviceTexture:&#160;gputraits_sycl.h']
631 ····]],631 ····]],
632 ····['devicetransfers_2ecpp_390',·['devicetransfers.cpp',·['../devicetransfers_8cpp.xhtml',·1,·'']]],632 ····['devicetransfers_2ecpp_390',·['devicetransfers.cpp',·['../devicetransfers_8cpp.xhtml',·1,·'']]],
633 ····['devicetransfers_2eh_391',·['devicetransfers.h',·['../devicetransfers_8h.xhtml',·1,·'']]],633 ····['devicetransfers_2eh_391',·['devicetransfers.h',·['../devicetransfers_8h.xhtml',·1,·'']]],
634 ····['devicetransfers_5focl_2ecpp_392',·['devicetransfers_ocl.cpp',·['../devicetransfers__ocl_8cpp.xhtml',·1,·'']]],634 ····['devicetransfers_5focl_2ecpp_392',·['devicetransfers_ocl.cpp',·['../devicetransfers__ocl_8cpp.xhtml',·1,·'']]],
635 ····['devicetransfers_5fsycl_2ecpp_393',·['devicetransfers_sycl.cpp',·['../devicetransfers__sycl_8cpp.xhtml',·1,·'']]],635 ····['devicetransfers_5fsycl_2ecpp_393',·['devicetransfers_sycl.cpp',·['../devicetransfers__sycl_8cpp.xhtml',·1,·'']]],
636 ····['devicevendor_394',·['devicevendor',·['../device__information_8h.xhtml#a5514710e3c78d4816da9e8d2e3cd508c',·1,·'DeviceVendor:&#160;device_information.h'],636 ····['devicevendor_394',·['devicevendor',·['../device__information_8h.xhtml#a5514710e3c78d4816da9e8d2e3cd508c',·1,·'DeviceVendor:&#160;device_information.h'],
637 ········['../structDeviceInformation.xhtml#af4bb0f772e111410d33b2d1a72b3743f',·1,·'DeviceInformation::deviceVendor']637 ········['../structDeviceInformation.xhtml#af4bb0f772e111410d33b2d1a72b3743f',·1,·'DeviceInformation::deviceVendor']
Offset 958, 16 lines modifiedOffset 958, 16 lines modified
958 ····]],958 ····]],
959 ····['doubletostring_618',·['doubleToString',·['../group__module__utility.xhtml#gadd11829c264b9d9b89a68a0baf26a7bd',·1,·'gmx']]],959 ····['doubletostring_618',·['doubleToString',·['../group__module__utility.xhtml#gadd11829c264b9d9b89a68a0baf26a7bd',·1,·'gmx']]],
960 ····['douchar_619',·['doUChar',·['../classgmx_1_1FileIOXdrSerializer.xhtml#a0a3c7b45d828e8a5dc31094d2e23aa19',·1,·'gmx::FileIOXdrSerializer']]],960 ····['douchar_619',·['doUChar',·['../classgmx_1_1FileIOXdrSerializer.xhtml#a0a3c7b45d828e8a5dc31094d2e23aa19',·1,·'gmx::FileIOXdrSerializer']]],
961 ····['douchararray_620',·['doUCharArray',·['../classgmx_1_1FileIOXdrSerializer.xhtml#a0e2f90a62f8aaf7f554f41725fb8ee4b',·1,·'gmx::FileIOXdrSerializer']]],961 ····['douchararray_620',·['doUCharArray',·['../classgmx_1_1FileIOXdrSerializer.xhtml#a0e2f90a62f8aaf7f554f41725fb8ee4b',·1,·'gmx::FileIOXdrSerializer']]],
962 ····['doushort_621',·['doUShort',·['../classgmx_1_1FileIOXdrSerializer.xhtml#aa1efcd8ea6bc77333af3390821a00590',·1,·'gmx::FileIOXdrSerializer']]],962 ····['doushort_621',·['doUShort',·['../classgmx_1_1FileIOXdrSerializer.xhtml#aa1efcd8ea6bc77333af3390821a00590',·1,·'gmx::FileIOXdrSerializer']]],
963 ····['dsaupd_622',·['dsaupd',·['../gmx__arpack_8h.xhtml#aede26434dc7f4a1ae472eca9d5b7bf65',·1,·'gmx_arpack.h']]],963 ····['dsaupd_622',·['dsaupd',·['../gmx__arpack_8h.xhtml#aede26434dc7f4a1ae472eca9d5b7bf65',·1,·'gmx_arpack.h']]],
964 ····['dseupd_623',·['dseupd',·['../gmx__arpack_8h.xhtml#aab6c14c639569f6bf80e7226979cb514',·1,·'gmx_arpack.h']]],964 ····['dseupd_623',·['dseupd',·['../gmx__arpack_8h.xhtml#aab6c14c639569f6bf80e7226979cb514',·1,·'gmx_arpack.h']]],
965 ····['dssp_2ecpp_624',·['dssp.cpp',·['../tests_2dssp_8cpp.xhtml',·1,·'(Global·Namespace)'],965 ····['dssp_2ecpp_624',·['dssp.cpp',·['../modules_2dssp_8cpp.xhtml',·1,·'(Global·Namespace)'],
966 ········['../modules_2dssp_8cpp.xhtml',·1,·'(Global·Namespace)']966 ········['../tests_2dssp_8cpp.xhtml',·1,·'(Global·Namespace)']
967 ····]],967 ····]],
968 ····['dssp_2eh_625',·['dssp.h',·['../dssp_8h.xhtml',·1,·'']]],968 ····['dssp_2eh_625',·['dssp.h',·['../dssp_8h.xhtml',·1,·'']]],
969 ····['dsspdata_5f_626',·['dsspData_',·['../structgmx_1_1analysismodules_1_1anonymous__namespace_02dssp_8cpp_03_1_1DsspStorageFrame.xhtml#a8399a04649caede9f20a0c8146faf1b1',·1,·'gmx::analysismodules::anonymous_namespace{dssp.cpp}::DsspStorageFrame']]],969 ····['dsspdata_5f_626',·['dsspData_',·['../structgmx_1_1analysismodules_1_1anonymous__namespace_02dssp_8cpp_03_1_1DsspStorageFrame.xhtml#a8399a04649caede9f20a0c8146faf1b1',·1,·'gmx::analysismodules::anonymous_namespace{dssp.cpp}::DsspStorageFrame']]],
970 ····['dsspmoduletestdsspnb_627',·['DsspModuleTestDsspNB',·['../classgmx_1_1test_1_1anonymous__namespace_02dssp_8cpp_03_1_1DsspModuleTestDsspNB.xhtml',·1,·'gmx::test::anonymous_namespace{dssp.cpp}']]],970 ····['dsspmoduletestdsspnb_627',·['DsspModuleTestDsspNB',·['../classgmx_1_1test_1_1anonymous__namespace_02dssp_8cpp_03_1_1DsspModuleTestDsspNB.xhtml',·1,·'gmx::test::anonymous_namespace{dssp.cpp}']]],
971 ····['dsspmoduletestdsspnonb_628',·['DsspModuleTestDsspNoNB',·['../classgmx_1_1test_1_1anonymous__namespace_02dssp_8cpp_03_1_1DsspModuleTestDsspNoNB.xhtml',·1,·'gmx::test::anonymous_namespace{dssp.cpp}']]],971 ····['dsspmoduletestdsspnonb_628',·['DsspModuleTestDsspNoNB',·['../classgmx_1_1test_1_1anonymous__namespace_02dssp_8cpp_03_1_1DsspModuleTestDsspNoNB.xhtml',·1,·'gmx::test::anonymous_namespace{dssp.cpp}']]],
972 ····['dsspmoduletestgromacsnb_629',·['DsspModuleTestGromacsNB',·['../classgmx_1_1test_1_1anonymous__namespace_02dssp_8cpp_03_1_1DsspModuleTestGromacsNB.xhtml',·1,·'gmx::test::anonymous_namespace{dssp.cpp}']]],972 ····['dsspmoduletestgromacsnb_629',·['DsspModuleTestGromacsNB',·['../classgmx_1_1test_1_1anonymous__namespace_02dssp_8cpp_03_1_1DsspModuleTestGromacsNB.xhtml',·1,·'gmx::test::anonymous_namespace{dssp.cpp}']]],
973 ····['dsspmoduletestgromacsnonb_630',·['DsspModuleTestGromacsNoNB',·['../classgmx_1_1test_1_1anonymous__namespace_02dssp_8cpp_03_1_1DsspModuleTestGromacsNoNB.xhtml',·1,·'gmx::test::anonymous_namespace{dssp.cpp}']]],973 ····['dsspmoduletestgromacsnonb_630',·['DsspModuleTestGromacsNoNB',·['../classgmx_1_1test_1_1anonymous__namespace_02dssp_8cpp_03_1_1DsspModuleTestGromacsNoNB.xhtml',·1,·'gmx::test::anonymous_namespace{dssp.cpp}']]],
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175 ········['../page_module_selection_parser.xhtml#selparser_tree_const',·1,·'Constant·elements'],175 ········['../page_module_selection_parser.xhtml#selparser_tree_const',·1,·'Constant·elements'],
176 ········['../page_module_selection_compiler.xhtml#selcompiler_tree_const',·1,·'Constant·elements'],176 ········['../page_module_selection_compiler.xhtml#selcompiler_tree_const',·1,·'Constant·elements'],
177 ········['../classgmx_1_1KeyValueTreePath.xhtml#a1d86be1f4183f54eb6783f04b4a4e4fa',·1,·'gmx::KeyValueTreePath::elements()'],177 ········['../classgmx_1_1KeyValueTreePath.xhtml#a1d86be1f4183f54eb6783f04b4a4e4fa',·1,·'gmx::KeyValueTreePath::elements()'],
178 ········['../page_module_selection_compiler.xhtml#selcompiler_tree_method',·1,·'Method·evaluation·elements'],178 ········['../page_module_selection_compiler.xhtml#selcompiler_tree_method',·1,·'Method·evaluation·elements'],
179 ········['../page_module_selection_parser.xhtml#selparser_tree_method',·1,·'Method·evaluation·elements'],179 ········['../page_module_selection_parser.xhtml#selparser_tree_method',·1,·'Method·evaluation·elements'],
180 ········['../page_module_selection_parser.xhtml#selparser_tree_root',·1,·'Root·elements'],180 ········['../page_module_selection_parser.xhtml#selparser_tree_root',·1,·'Root·elements'],
181 ········['../page_module_selection_compiler.xhtml#selcompiler_tree_root',·1,·'Root·elements'],181 ········['../page_module_selection_compiler.xhtml#selcompiler_tree_root',·1,·'Root·elements'],
182 ········['../page_modularsimulator.xhtml#autotoc_md22',·1,·'Simulator·Elements'], 
183 ········['../page_modularsimulator.xhtml#autotoc_md11',·1,·'Simulator·elements'],182 ········['../page_modularsimulator.xhtml#autotoc_md11',·1,·'Simulator·elements'],
 183 ········['../page_modularsimulator.xhtml#autotoc_md22',·1,·'Simulator·Elements'],
184 ········['../page_module_selection_parser.xhtml#selparser_tree_subexpr',·1,·'Subexpression·elements'],184 ········['../page_module_selection_parser.xhtml#selparser_tree_subexpr',·1,·'Subexpression·elements'],
185 ········['../page_module_selection_compiler.xhtml#selcompiler_tree_subexpr',·1,·'Subexpression·elements']185 ········['../page_module_selection_compiler.xhtml#selcompiler_tree_subexpr',·1,·'Subexpression·elements']
186 ····]],186 ····]],
187 ····['elementsetup_142',·['elementsetup',·['../classgmx_1_1FreeEnergyPerturbationData_1_1Element.xhtml#a84955a8e27c90edfb3e0c59f78a26576',·1,·'gmx::FreeEnergyPerturbationData::Element::elementSetup()'],187 ····['elementsetup_142',·['elementsetup',·['../classgmx_1_1ComputeGlobalsElement.xhtml#a4b1fd8c1465717da2722f7d16101f7e4',·1,·'gmx::ComputeGlobalsElement::elementSetup()'],
188 ········['../group__module__modularsimulator.xhtml#ga427faebc543ef467233db8d034e3e6a2',·1,·'gmx::ISimulatorElement::elementSetup()'],188 ········['../group__module__modularsimulator.xhtml#ga427faebc543ef467233db8d034e3e6a2',·1,·'gmx::ISimulatorElement::elementSetup()'],
189 ········['../classgmx_1_1ForceElement.xhtml#a6098b4a1af32107789c511a53e7175fa',·1,·'gmx::ForceElement::elementSetup()'], 
190 ········['../classgmx_1_1MttkElement.xhtml#ad3e75ee7885253cbae6a2a4d4561dcc3',·1,·'gmx::MttkElement::elementSetup()'],189 ········['../classgmx_1_1MttkElement.xhtml#ad3e75ee7885253cbae6a2a4d4561dcc3',·1,·'gmx::MttkElement::elementSetup()'],
 190 ········['../classgmx_1_1FreeEnergyPerturbationData_1_1Element.xhtml#a84955a8e27c90edfb3e0c59f78a26576',·1,·'gmx::FreeEnergyPerturbationData::Element::elementSetup()'],
191 ········['../classgmx_1_1MttkBoxScaling.xhtml#a67b5ea328f0f9c8b0916bffbf773f51d',·1,·'gmx::MttkBoxScaling::elementSetup()'],191 ········['../classgmx_1_1MttkBoxScaling.xhtml#a67b5ea328f0f9c8b0916bffbf773f51d',·1,·'gmx::MttkBoxScaling::elementSetup()'],
192 ········['../classgmx_1_1FirstOrderPressureCoupling.xhtml#aa565438c831b5b43abc9109485de253a',·1,·'gmx::FirstOrderPressureCoupling::elementSetup()'], 
193 ········['../classgmx_1_1NoseHooverChainsElement.xhtml#a42346f25d9adac8857804dd97c4adb1d',·1,·'gmx::NoseHooverChainsElement::elementSetup()'],192 ········['../classgmx_1_1NoseHooverChainsElement.xhtml#a42346f25d9adac8857804dd97c4adb1d',·1,·'gmx::NoseHooverChainsElement::elementSetup()'],
 193 ········['../classgmx_1_1ForceElement.xhtml#a6098b4a1af32107789c511a53e7175fa',·1,·'gmx::ForceElement::elementSetup()'],
194 ········['../classgmx_1_1ParrinelloRahmanBarostat.xhtml#a8d3a352b12a62d1ba8504eb8fd31acda',·1,·'gmx::ParrinelloRahmanBarostat::elementSetup()'],194 ········['../classgmx_1_1ParrinelloRahmanBarostat.xhtml#a8d3a352b12a62d1ba8504eb8fd31acda',·1,·'gmx::ParrinelloRahmanBarostat::elementSetup()'],
 195 ········['../classgmx_1_1FirstOrderPressureCoupling.xhtml#aa565438c831b5b43abc9109485de253a',·1,·'gmx::FirstOrderPressureCoupling::elementSetup()'],
195 ········['../classgmx_1_1ExpandedEnsembleElement.xhtml#afb341245baa80e264f119622ea660fd4',·1,·'gmx::ExpandedEnsembleElement::elementSetup()'],196 ········['../classgmx_1_1ExpandedEnsembleElement.xhtml#afb341245baa80e264f119622ea660fd4',·1,·'gmx::ExpandedEnsembleElement::elementSetup()'],
196 ········['../classgmx_1_1ConstraintsElement.xhtml#a49afd5b53ba3b039418a0ea819f716b2',·1,·'gmx::ConstraintsElement::elementSetup()'], 
197 ········['../classgmx_1_1Propagator.xhtml#a8f15ffd22796fb0163d378cf57c36af7',·1,·'gmx::Propagator::elementSetup()'], 
198 ········['../classgmx_1_1EnergyData_1_1Element.xhtml#abaa46df5d89a2ef04b4bd1ca5e84f2fc',·1,·'gmx::EnergyData::Element::elementSetup()'],197 ········['../classgmx_1_1EnergyData_1_1Element.xhtml#abaa46df5d89a2ef04b4bd1ca5e84f2fc',·1,·'gmx::EnergyData::Element::elementSetup()'],
199 ········['../classgmx_1_1ComputeGlobalsElement.xhtml#a4b1fd8c1465717da2722f7d16101f7e4',·1,·'gmx::ComputeGlobalsElement::elementSetup()'], 
200 ········['../classgmx_1_1PullElement.xhtml#a1a4c6732f9978f57b96c25347c99c430',·1,·'gmx::PullElement::elementSetup()'],198 ········['../classgmx_1_1Propagator.xhtml#a8f15ffd22796fb0163d378cf57c36af7',·1,·'gmx::Propagator::elementSetup()'],
 199 ········['../classgmx_1_1ConstraintsElement.xhtml#a49afd5b53ba3b039418a0ea819f716b2',·1,·'gmx::ConstraintsElement::elementSetup()'],
201 ········['../classgmx_1_1CompositeSimulatorElement.xhtml#a0eff43f3fe568005c9b4ad091f7c4dfb',·1,·'gmx::CompositeSimulatorElement::elementSetup()'],200 ········['../classgmx_1_1CompositeSimulatorElement.xhtml#a0eff43f3fe568005c9b4ad091f7c4dfb',·1,·'gmx::CompositeSimulatorElement::elementSetup()'],
 201 ········['../classgmx_1_1PullElement.xhtml#a1a4c6732f9978f57b96c25347c99c430',·1,·'gmx::PullElement::elementSetup()'],
202 ········['../classgmx_1_1CheckpointHelper.xhtml#a3ac29c9efb5ce4e05c3eeeb9b69f206a',·1,·'gmx::CheckpointHelper::elementSetup()'],202 ········['../classgmx_1_1CheckpointHelper.xhtml#a3ac29c9efb5ce4e05c3eeeb9b69f206a',·1,·'gmx::CheckpointHelper::elementSetup()'],
203 ········['../classgmx_1_1AndersenTemperatureCoupling.xhtml#a7b96d57ae600c389e24dd1567b19fa59',·1,·'gmx::AndersenTemperatureCoupling::elementSetup()'],203 ········['../classgmx_1_1AndersenTemperatureCoupling.xhtml#a7b96d57ae600c389e24dd1567b19fa59',·1,·'gmx::AndersenTemperatureCoupling::elementSetup()'],
204 ········['../classgmx_1_1StatePropagatorData_1_1Element.xhtml#a17de7b51fbe3ebe86b9579536e357eb3',·1,·'gmx::StatePropagatorData::Element::elementSetup()'],204 ········['../classgmx_1_1StatePropagatorData_1_1Element.xhtml#a17de7b51fbe3ebe86b9579536e357eb3',·1,·'gmx::StatePropagatorData::Element::elementSetup()'],
205 ········['../classgmx_1_1TrajectoryElement.xhtml#abe4f98650f14b2b0075bf3f79b622514',·1,·'gmx::TrajectoryElement::elementSetup()'],205 ········['../classgmx_1_1TrajectoryElement.xhtml#abe4f98650f14b2b0075bf3f79b622514',·1,·'gmx::TrajectoryElement::elementSetup()'],
206 ········['../classgmx_1_1VelocityScalingTemperatureCoupling.xhtml#ad300b2c72fc81216cc38bd4598308452',·1,·'gmx::VelocityScalingTemperatureCoupling::elementSetup()']206 ········['../classgmx_1_1VelocityScalingTemperatureCoupling.xhtml#ad300b2c72fc81216cc38bd4598308452',·1,·'gmx::VelocityScalingTemperatureCoupling::elementSetup()']
207 ····]],207 ····]],
208 ····['elementsview_143',·['elementsView',·['../classgmx_1_1ListOfLists.xhtml#a9dd0217bd4f431fe7098e4ade8eeb8b3',·1,·'gmx::ListOfLists']]],208 ····['elementsview_143',·['elementsView',·['../classgmx_1_1ListOfLists.xhtml#a9dd0217bd4f431fe7098e4ade8eeb8b3',·1,·'gmx::ListOfLists']]],
Offset 296, 16 lines modifiedOffset 296, 16 lines modified
296 ········['../group__module__utility.xhtml#gaa1e33d963e2538664428c8db95ca564e',·1,·'gmx::endsWith(const·std::string·&amp;str,·const·char·*suffix)'],296 ········['../group__module__utility.xhtml#gaa1e33d963e2538664428c8db95ca564e',·1,·'gmx::endsWith(const·std::string·&amp;str,·const·char·*suffix)'],
297 ········['../group__module__utility.xhtml#ga8b22d1fd014cc09c9cf7c4c1615c0a1b',·1,·'gmx::endsWith(const·char·*str,·const·char·*suffix)']297 ········['../group__module__utility.xhtml#ga8b22d1fd014cc09c9cf7c4c1615c0a1b',·1,·'gmx::endsWith(const·char·*str,·const·char·*suffix)']
298 ····]],298 ····]],
299 ····['ener_5ffile_5fptr_179',·['ener_file_ptr',·['../namespacegmx_1_1test.xhtml#a0cf2e1e7224ea64c7762046eb635aaf7',·1,·'gmx::test']]],299 ····['ener_5ffile_5fptr_179',·['ener_file_ptr',·['../namespacegmx_1_1test.xhtml#a0cf2e1e7224ea64c7762046eb635aaf7',·1,·'gmx::test']]],
300 ····['enerd_180',·['enerd',·['../classgmx_1_1ImdSession_1_1Impl.xhtml#a83462cc2d6b109c54ec0cdbfc9e3a8a1',·1,·'gmx::ImdSession::Impl::enerd'],300 ····['enerd_180',·['enerd',·['../classgmx_1_1ImdSession_1_1Impl.xhtml#a83462cc2d6b109c54ec0cdbfc9e3a8a1',·1,·'gmx::ImdSession::Impl::enerd'],
301 ········['../classanonymous__namespace_02minimize_8cpp_03_1_1EnergyEvaluator.xhtml#aeab7e09583e2548fcad4ad6da7ca3f44',·1,·'anonymous_namespace{minimize.cpp}::EnergyEvaluator::enerd']301 ········['../classanonymous__namespace_02minimize_8cpp_03_1_1EnergyEvaluator.xhtml#aeab7e09583e2548fcad4ad6da7ca3f44',·1,·'anonymous_namespace{minimize.cpp}::EnergyEvaluator::enerd']
302 ····]],302 ····]],
303 ····['enerd_5f_181',·['enerd_',·['../classgmx_1_1ForceProviderOutput.xhtml#a3e5d000f356115dc346c471eeac73932',·1,·'gmx::ForceProviderOutput::enerd_'], 
304 ········['../classgmx_1_1LegacySimulatorData.xhtml#a4901f0e36e8dfe004872229cd1b17dd3',·1,·'gmx::LegacySimulatorData::enerd_']303 ····['enerd_5f_181',·['enerd_',·['../classgmx_1_1LegacySimulatorData.xhtml#a4901f0e36e8dfe004872229cd1b17dd3',·1,·'gmx::LegacySimulatorData::enerd_'],
 304 ········['../classgmx_1_1ForceProviderOutput.xhtml#a3e5d000f356115dc346c471eeac73932',·1,·'gmx::ForceProviderOutput::enerd_']
305 ····]],305 ····]],
306 ····['enerdata_182',·['enerdata',·['../classgmx_1_1EnergyData.xhtml#af5ff3635bcb4d7ecb90c7505f70ff2d9',·1,·'gmx::EnergyData::enerdata()'],306 ····['enerdata_182',·['enerdata',·['../classgmx_1_1EnergyData.xhtml#af5ff3635bcb4d7ecb90c7505f70ff2d9',·1,·'gmx::EnergyData::enerdata()'],
307 ········['../classgmx_1_1EnergyData.xhtml#a8253678c958de422aabdc634405276ca',·1,·'gmx::EnergyData::enerdata()·const']307 ········['../classgmx_1_1EnergyData.xhtml#a8253678c958de422aabdc634405276ca',·1,·'gmx::EnergyData::enerdata()·const']
308 ····]],308 ····]],
309 ····['enerdata_2ecpp_183',·['enerdata.cpp',·['../enerdata_8cpp.xhtml',·1,·'']]],309 ····['enerdata_2ecpp_183',·['enerdata.cpp',·['../enerdata_8cpp.xhtml',·1,·'']]],
310 ····['enerdata_5f_184',·['enerdata_',·['../classgmx_1_1test_1_1anonymous__namespace_02energyoutput_8cpp_03_1_1EnergyOutputTest.xhtml#a178388e022bfe1f8dad4cc34a318ae9d',·1,·'gmx::test::anonymous_namespace{energyoutput.cpp}::EnergyOutputTest']]],310 ····['enerdata_5f_184',·['enerdata_',·['../classgmx_1_1test_1_1anonymous__namespace_02energyoutput_8cpp_03_1_1EnergyOutputTest.xhtml#a178388e022bfe1f8dad4cc34a318ae9d',·1,·'gmx::test::anonymous_namespace{energyoutput.cpp}::EnergyOutputTest']]],
311 ····['enerdata_5fp_185',·['enerdata_p',·['../structgmx_1_1SimulatorStateData.xhtml#a44621b372fa324a71ad5d4791f55e561',·1,·'gmx::SimulatorStateData']]],311 ····['enerdata_5fp_185',·['enerdata_p',·['../structgmx_1_1SimulatorStateData.xhtml#a44621b372fa324a71ad5d4791f55e561',·1,·'gmx::SimulatorStateData']]],
Offset 337, 16 lines modifiedOffset 337, 16 lines modified
337 ····['energycomparison_198',·['energycomparison',·['../classgmx_1_1test_1_1EnergyComparison.xhtml',·1,·'gmx::test::EnergyComparison'],337 ····['energycomparison_198',·['energycomparison',·['../classgmx_1_1test_1_1EnergyComparison.xhtml',·1,·'gmx::test::EnergyComparison'],
338 ········['../classgmx_1_1test_1_1EnergyComparison.xhtml#aafb2df8ef9a36c6a3cffc8ac57cf2645',·1,·'gmx::test::EnergyComparison::EnergyComparison()']338 ········['../classgmx_1_1test_1_1EnergyComparison.xhtml#aafb2df8ef9a36c6a3cffc8ac57cf2645',·1,·'gmx::test::EnergyComparison::EnergyComparison()']
339 ····]],339 ····]],
340 ····['energycomparison_2ecpp_199',·['energycomparison.cpp',·['../energycomparison_8cpp.xhtml',·1,·'']]],340 ····['energycomparison_2ecpp_199',·['energycomparison.cpp',·['../energycomparison_8cpp.xhtml',·1,·'']]],
341 ····['energycomparison_2eh_200',·['energycomparison.h',·['../energycomparison_8h.xhtml',·1,·'']]],341 ····['energycomparison_2eh_200',·['energycomparison.h',·['../energycomparison_8h.xhtml',·1,·'']]],
342 ····['energycomparison_5f_201',·['energyComparison_',·['../classgmx_1_1test_1_1PeriodicActionsTest.xhtml#accffb92e7241f0a2b319173bcc6e239a',·1,·'gmx::test::PeriodicActionsTest']]],342 ····['energycomparison_5f_201',·['energyComparison_',·['../classgmx_1_1test_1_1PeriodicActionsTest.xhtml#accffb92e7241f0a2b319173bcc6e239a',·1,·'gmx::test::PeriodicActionsTest']]],
343 ····['energycontribution_202',·['EnergyContribution',·['../namespacegmx.xhtml#a41036212ab3b994374d2c2f02772427c',·1,·'gmx']]],343 ····['energycontribution_202',·['EnergyContribution',·['../namespacegmx.xhtml#a41036212ab3b994374d2c2f02772427c',·1,·'gmx']]],
 344 ····['energydata_203',·['energydata',·['../classgmx_1_1EnergyData.xhtml',·1,·'gmx::EnergyData'],
344 ····['energydata_203',·['energydata',·['../classgmx_1_1EnergyData.xhtml#a15119585f028d3e0501e51fd4ab690b2',·1,·'gmx::EnergyData::EnergyData()'],345 ········['../classgmx_1_1EnergyData.xhtml#a15119585f028d3e0501e51fd4ab690b2',·1,·'gmx::EnergyData::EnergyData()']
345 ········['../classgmx_1_1EnergyData.xhtml',·1,·'gmx::EnergyData'] 
346 ····]],346 ····]],
347 ····['energydata_20tt_204',·['&lt;tt&gt;EnergyData&lt;/tt&gt;',·['../page_modularsimulator.xhtml#autotoc_md36',·1,·'']]],347 ····['energydata_20tt_204',·['&lt;tt&gt;EnergyData&lt;/tt&gt;',·['../page_modularsimulator.xhtml#autotoc_md36',·1,·'']]],
348 ····['energydata_2ecpp_205',·['energydata.cpp',·['../energydata_8cpp.xhtml',·1,·'']]],348 ····['energydata_2ecpp_205',·['energydata.cpp',·['../energydata_8cpp.xhtml',·1,·'']]],
349 ····['energydata_2eh_206',·['energydata.h',·['../energydata_8h.xhtml',·1,·'']]],349 ····['energydata_2eh_206',·['energydata.h',·['../energydata_8h.xhtml',·1,·'']]],
350 ····['energydata_3a_3aelement_20tt_207',·['&lt;tt&gt;EnergyData::Element&lt;/tt&gt;',·['../page_modularsimulator.xhtml#autotoc_md32',·1,·'']]],350 ····['energydata_3a_3aelement_20tt_207',·['&lt;tt&gt;EnergyData::Element&lt;/tt&gt;',·['../page_modularsimulator.xhtml#autotoc_md32',·1,·'']]],
351 ····['energydrift_208',·['energyDrift',·['../classgmx_1_1EnergyDriftTracker.xhtml#af7dcf448940396b29c3ffb9e935fee66',·1,·'gmx::EnergyDriftTracker']]],351 ····['energydrift_208',·['energyDrift',·['../classgmx_1_1EnergyDriftTracker.xhtml#af7dcf448940396b29c3ffb9e935fee66',·1,·'gmx::EnergyDriftTracker']]],
352 ····['energydriftstring_209',·['energyDriftString',·['../classgmx_1_1EnergyDriftTracker.xhtml#ae353361ca2765e1c7655c1862fb49723',·1,·'gmx::EnergyDriftTracker']]],352 ····['energydriftstring_209',·['energyDriftString',·['../classgmx_1_1EnergyDriftTracker.xhtml#ae353361ca2765e1c7655c1862fb49723',·1,·'gmx::EnergyDriftTracker']]],
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Offset 543, 16 lines modifiedOffset 543, 16 lines modified
543 ····['forcebufferfordirectvirialcontributions_293',·['forceBufferForDirectVirialContributions',·['../classForceHelperBuffers.xhtml#a083fa66a7eb616ec2f3e01532bcb868a',·1,·'ForceHelperBuffers']]],543 ····['forcebufferfordirectvirialcontributions_293',·['forceBufferForDirectVirialContributions',·['../classForceHelperBuffers.xhtml#a083fa66a7eb616ec2f3e01532bcb868a',·1,·'ForceHelperBuffers']]],
544 ····['forcebuffers_294',·['forcebuffers',·['../classgmx_1_1ForceBuffers.xhtml#ace368bdb63c723367e8de41ff03e6ef2',·1,·'gmx::ForceBuffers::ForceBuffers(ForceBuffers·&amp;&amp;o)=delete'],544 ····['forcebuffers_294',·['forcebuffers',·['../classgmx_1_1ForceBuffers.xhtml#ace368bdb63c723367e8de41ff03e6ef2',·1,·'gmx::ForceBuffers::ForceBuffers(ForceBuffers·&amp;&amp;o)=delete'],
545 ········['../classgmx_1_1ForceBuffers.xhtml#af3eccf5e0a3d50fd46117dcf8310d43d',·1,·'gmx::ForceBuffers::ForceBuffers(const·ForceBuffers·&amp;o)=delete'],545 ········['../classgmx_1_1ForceBuffers.xhtml#af3eccf5e0a3d50fd46117dcf8310d43d',·1,·'gmx::ForceBuffers::ForceBuffers(const·ForceBuffers·&amp;o)=delete'],
546 ········['../classgmx_1_1ForceBuffers.xhtml#a097cb3fed169c66c986820121462b0c1',·1,·'gmx::ForceBuffers::ForceBuffers(bool·useForceMtsCombined,·PinningPolicy·pinningPolicy)'],546 ········['../classgmx_1_1ForceBuffers.xhtml#a097cb3fed169c66c986820121462b0c1',·1,·'gmx::ForceBuffers::ForceBuffers(bool·useForceMtsCombined,·PinningPolicy·pinningPolicy)'],
547 ········['../classgmx_1_1ForceBuffers.xhtml',·1,·'gmx::ForceBuffers'],547 ········['../classgmx_1_1ForceBuffers.xhtml',·1,·'gmx::ForceBuffers'],
548 ········['../classgmx_1_1ForceBuffers.xhtml#a1854ef7ef3e6623ab2cfa73e07597d4a',·1,·'gmx::ForceBuffers::ForceBuffers()']548 ········['../classgmx_1_1ForceBuffers.xhtml#a1854ef7ef3e6623ab2cfa73e07597d4a',·1,·'gmx::ForceBuffers::ForceBuffers()']
549 ····]],549 ····]],
550 ····['forcebuffers_2ecpp_295',·['forcebuffers.cpp',·['../tests_2forcebuffers_8cpp.xhtml',·1,·'(Global·Namespace)'],550 ····['forcebuffers_2ecpp_295',·['forcebuffers.cpp',·['../forcebuffers_8cpp.xhtml',·1,·'(Global·Namespace)'],
551 ········['../forcebuffers_8cpp.xhtml',·1,·'(Global·Namespace)']551 ········['../tests_2forcebuffers_8cpp.xhtml',·1,·'(Global·Namespace)']
552 ····]],552 ····]],
553 ····['forcebuffers_2eh_296',·['forcebuffers.h',·['../forcebuffers_8h.xhtml',·1,·'']]],553 ····['forcebuffers_2eh_296',·['forcebuffers.h',·['../forcebuffers_8h.xhtml',·1,·'']]],
554 ····['forcebuffersview_297',·['forcebuffersview',·['../classgmx_1_1ForceBuffersView.xhtml#a3590d4fc647af93ab0f6092f85ed7b1f',·1,·'gmx::ForceBuffersView::ForceBuffersView()'],554 ····['forcebuffersview_297',·['forcebuffersview',·['../classgmx_1_1ForceBuffersView.xhtml#a3590d4fc647af93ab0f6092f85ed7b1f',·1,·'gmx::ForceBuffersView::ForceBuffersView()'],
555 ········['../classgmx_1_1ForceBuffersView.xhtml',·1,·'gmx::ForceBuffersView'],555 ········['../classgmx_1_1ForceBuffersView.xhtml',·1,·'gmx::ForceBuffersView'],
556 ········['../classgmx_1_1ForceBuffersView.xhtml#a38b40421ab657108d222878f50f54f99',·1,·'gmx::ForceBuffersView::ForceBuffersView(ForceBuffersView·&amp;&amp;o)=delete'],556 ········['../classgmx_1_1ForceBuffersView.xhtml#a38b40421ab657108d222878f50f54f99',·1,·'gmx::ForceBuffersView::ForceBuffersView(ForceBuffersView·&amp;&amp;o)=delete'],
557 ········['../classgmx_1_1ForceBuffersView.xhtml#a75e5dfcac0461da9e1ba0671b99e2e19',·1,·'gmx::ForceBuffersView::ForceBuffersView(const·ForceBuffersView·&amp;o)=delete']557 ········['../classgmx_1_1ForceBuffersView.xhtml#a75e5dfcac0461da9e1ba0671b99e2e19',·1,·'gmx::ForceBuffersView::ForceBuffersView(const·ForceBuffersView·&amp;o)=delete']
558 ····]],558 ····]],
Offset 856, 16 lines modifiedOffset 856, 16 lines modified
856 ····['freegpuprogram_458',·['freeGpuProgram',·['../namespaceNbnxm.xhtml#a92f6135855475ff80f47658a5670bf8d',·1,·'Nbnxm']]],856 ····['freegpuprogram_458',·['freeGpuProgram',·['../namespaceNbnxm.xhtml#a92f6135855475ff80f47658a5670bf8d',·1,·'Nbnxm']]],
857 ····['freeimpl_459',·['freeImpl',·['../namespacegmx_1_1anonymous__namespace_02alignedallocator_8cpp_03.xhtml#a8180c1a136623d6b7e76ac9be7eb6883',·1,·'gmx::anonymous_namespace{alignedallocator.cpp}']]],857 ····['freeimpl_459',·['freeImpl',·['../namespacegmx_1_1anonymous__namespace_02alignedallocator_8cpp_03.xhtml#a8180c1a136623d6b7e76ac9be7eb6883',·1,·'gmx::anonymous_namespace{alignedallocator.cpp}']]],
858 ····['freeptr_460',·['freeptr',·['../structgmx__sel__mempool__t.xhtml#a2b7446cad910e6e6728dc2b169842a2c',·1,·'gmx_sel_mempool_t']]],858 ····['freeptr_460',·['freeptr',·['../structgmx__sel__mempool__t.xhtml#a2b7446cad910e6e6728dc2b169842a2c',·1,·'gmx_sel_mempool_t']]],
859 ····['freesize_461',·['freesize',·['../structgmx__sel__mempool__t.xhtml#ae7354978f237cc4f1051e0099180e624',·1,·'gmx_sel_mempool_t']]],859 ····['freesize_461',·['freesize',·['../structgmx__sel__mempool__t.xhtml#ae7354978f237cc4f1051e0099180e624',·1,·'gmx_sel_mempool_t']]],
860 ····['freeumbrellawindows_462',·['freeUmbrellaWindows',·['../gmx__wham_8cpp.xhtml#a542393ecfd078496aa205b36bc4ad8d0',·1,·'gmx_wham.cpp']]],860 ····['freeumbrellawindows_462',·['freeUmbrellaWindows',·['../gmx__wham_8cpp.xhtml#a542393ecfd078496aa205b36bc4ad8d0',·1,·'gmx_wham.cpp']]],
861 ····['freevalues_463',·['freeValues',·['../classgmx_1_1SelectionTreeElement.xhtml#ae975003186d24e163d3548c47569e21b',·1,·'gmx::SelectionTreeElement']]],861 ····['freevalues_463',·['freeValues',·['../classgmx_1_1SelectionTreeElement.xhtml#ae975003186d24e163d3548c47569e21b',·1,·'gmx::SelectionTreeElement']]],
862 ····['freevolume_464',·['FreeVolume',·['../classgmx_1_1analysismodules_1_1anonymous__namespace_02freevolume_8cpp_03_1_1FreeVolume.xhtml',·1,·'gmx::analysismodules::anonymous_namespace{freevolume.cpp}']]],862 ····['freevolume_464',·['FreeVolume',·['../classgmx_1_1analysismodules_1_1anonymous__namespace_02freevolume_8cpp_03_1_1FreeVolume.xhtml',·1,·'gmx::analysismodules::anonymous_namespace{freevolume.cpp}']]],
863 ····['freevolume_2ecpp_465',·['freevolume.cpp',·['../tests_2freevolume_8cpp.xhtml',·1,·'(Global·Namespace)'],863 ····['freevolume_2ecpp_465',·['freevolume.cpp',·['../modules_2freevolume_8cpp.xhtml',·1,·'(Global·Namespace)'],
864 ········['../modules_2freevolume_8cpp.xhtml',·1,·'(Global·Namespace)']864 ········['../tests_2freevolume_8cpp.xhtml',·1,·'(Global·Namespace)']
865 ····]],865 ····]],
866 ····['freevolume_2eh_466',·['freevolume.h',·['../freevolume_8h.xhtml',·1,·'']]],866 ····['freevolume_2eh_466',·['freevolume.h',·['../freevolume_8h.xhtml',·1,·'']]],
867 ····['freevolumemoduletest_467',·['FreeVolumeModuleTest',·['../namespaceanonymous__namespace_02freevolume_8cpp_03.xhtml#a29f0fa61841edec511eb0bfa7edb0cd4',·1,·'anonymous_namespace{freevolume.cpp}']]],867 ····['freevolumemoduletest_467',·['FreeVolumeModuleTest',·['../namespaceanonymous__namespace_02freevolume_8cpp_03.xhtml#a29f0fa61841edec511eb0bfa7edb0cd4',·1,·'anonymous_namespace{freevolume.cpp}']]],
868 ····['freezegroups_2ecpp_468',·['freezegroups.cpp',·['../freezegroups_8cpp.xhtml',·1,·'']]],868 ····['freezegroups_2ecpp_468',·['freezegroups.cpp',·['../freezegroups_8cpp.xhtml',·1,·'']]],
869 ····['freezegrouptestparams_469',·['FreezeGroupTestParams',·['../namespacegmx_1_1test_1_1anonymous__namespace_02freezegroups_8cpp_03.xhtml#adf16d01adbfbe692c680923d42bcff39',·1,·'gmx::test::anonymous_namespace{freezegroups.cpp}']]],869 ····['freezegrouptestparams_469',·['FreezeGroupTestParams',·['../namespacegmx_1_1test_1_1anonymous__namespace_02freezegroups_8cpp_03.xhtml#adf16d01adbfbe692c680923d42bcff39',·1,·'gmx::test::anonymous_namespace{freezegroups.cpp}']]],
870 ····['frequency_470',·['frequency',·['../classgmx_1_1AndersenTemperatureCoupling.xhtml#a4be5317bb27910438c62fe1dbabe5dcb',·1,·'gmx::AndersenTemperatureCoupling']]],870 ····['frequency_470',·['frequency',·['../classgmx_1_1AndersenTemperatureCoupling.xhtml#a4be5317bb27910438c62fe1dbabe5dcb',·1,·'gmx::AndersenTemperatureCoupling']]],
871 ····['frewind_471',·['frewind',·['../futil_8h.xhtml#a97d171ba8393365df315e678061376c0',·1,·'futil.cpp']]],871 ····['frewind_471',·['frewind',·['../futil_8h.xhtml#a97d171ba8393365df315e678061376c0',·1,·'futil.cpp']]],
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Offset 54, 73 lines modifiedOffset 54, 73 lines modified
54 ····['gammadistribution_39',·['gammadistribution',·['../classgmx_1_1GammaDistribution.xhtml#a504c8a74cfe78791b6e0fb1549aa95aa',·1,·'gmx::GammaDistribution::GammaDistribution(result_type·alpha=1.0,·result_type·theta=1.0)'],54 ····['gammadistribution_39',·['gammadistribution',·['../classgmx_1_1GammaDistribution.xhtml#a504c8a74cfe78791b6e0fb1549aa95aa',·1,·'gmx::GammaDistribution::GammaDistribution(result_type·alpha=1.0,·result_type·theta=1.0)'],
55 ········['../classgmx_1_1GammaDistribution.xhtml#a3e85f1c638a75a3add4e42730d104696',·1,·'gmx::GammaDistribution::GammaDistribution(const·param_type·&amp;param)'],55 ········['../classgmx_1_1GammaDistribution.xhtml#a3e85f1c638a75a3add4e42730d104696',·1,·'gmx::GammaDistribution::GammaDistribution(const·param_type·&amp;param)'],
56 ········['../classgmx_1_1GammaDistribution.xhtml',·1,·'gmx::GammaDistribution&lt;·RealType·&gt;']56 ········['../classgmx_1_1GammaDistribution.xhtml',·1,·'gmx::GammaDistribution&lt;·RealType·&gt;']
57 ····]],57 ····]],
58 ····['gammadistribution_2ecpp_40',·['gammadistribution.cpp',·['../gammadistribution_8cpp.xhtml',·1,·'']]],58 ····['gammadistribution_2ecpp_40',·['gammadistribution.cpp',·['../gammadistribution_8cpp.xhtml',·1,·'']]],
59 ····['gammadistribution_2eh_41',·['gammadistribution.h',·['../gammadistribution_8h.xhtml',·1,·'']]],59 ····['gammadistribution_2eh_41',·['gammadistribution.h',·['../gammadistribution_8h.xhtml',·1,·'']]],
60 ····['gatherinputparameters_42',·['GatherInputParameters',·['../namespacegmx_1_1test_1_1anonymous__namespace_02pmegathertest_8cpp_03.xhtml#a362d4e2b7aca10df5d1f78cba9d1c235',·1,·'gmx::test::anonymous_namespace{pmegathertest.cpp}']]],60 ····['gatherinputparameters_42',·['GatherInputParameters',·['../namespacegmx_1_1test_1_1anonymous__namespace_02pmegathertest_8cpp_03.xhtml#a362d4e2b7aca10df5d1f78cba9d1c235',·1,·'gmx::test::anonymous_namespace{pmegathertest.cpp}']]],
 61 ····['gatherintfrommultisimulation_43',·['gatherintfrommultisimulation',·['../multisim_8h.xhtml#a26ace2b27afcb558d72f98de9f43a645',·1,·'gatherIntFromMultiSimulation(const·gmx_multisim_t·*ms,·int·localValue):&#160;multisim.cpp'],
61 ····['gatherintfrommultisimulation_43',·['gatherintfrommultisimulation',·['../gromacs_2mdrunutility_2multisim_8cpp.xhtml#ae0afb120203682679347d7b3718605b0',·1,·'gatherIntFromMultiSimulation(const·gmx_multisim_t·*ms,·const·int·localValue):&#160;multisim.cpp'],62 ········['../gromacs_2mdrunutility_2multisim_8cpp.xhtml#ae0afb120203682679347d7b3718605b0',·1,·'gatherIntFromMultiSimulation(const·gmx_multisim_t·*ms,·const·int·localValue):&#160;multisim.cpp']
62 ········['../multisim_8h.xhtml#a26ace2b27afcb558d72f98de9f43a645',·1,·'gatherIntFromMultiSimulation(const·gmx_multisim_t·*ms,·int·localValue):&#160;multisim.cpp'] 
63 ····]],63 ····]],
64 ····['gatherloadbysimdinttranspose_44',·['gatherloadbysimdinttranspose',·['../group__module__simd.xhtml#ga1008329474744f6987edf28c4124ac24',·1,·'gmx::gatherLoadBySimdIntTranspose(const·double·*base,·SimdDInt32·offset,·SimdDouble·*v0,·SimdDouble·*v1,·SimdDouble·*v2,·SimdDouble·*v3)'], 
65 ········['../group__module__simd.xhtml#ga11385272a2b5123ca3aa3e5696e55dbc',·1,·'gmx::gatherLoadBySimdIntTranspose(const·double·*base,·SimdDInt32·offset,·SimdDouble·*v0,·SimdDouble·*v1)'], 
66 ········['../group__module__simd.xhtml#gac7ba60b7340036a984888bbca43616e4',·1,·'gmx::gatherLoadBySimdIntTranspose(const·float·*base,·SimdFInt32·offset,·SimdFloat·*v0,·SimdFloat·*v1,·SimdFloat·*v2,·SimdFloat·*v3)'], 
67 ········['../group__module__simd.xhtml#ga98bde531b096434095b228308e7a3025',·1,·'gmx::gatherLoadBySimdIntTranspose(const·float·*base,·SimdFInt32·offset,·SimdFloat·*v0,·SimdFloat·*v1)'],64 ····['gatherloadbysimdinttranspose_44',·['gatherloadbysimdinttranspose',·['../group__module__simd.xhtml#ga98bde531b096434095b228308e7a3025',·1,·'gmx::gatherLoadBySimdIntTranspose(const·float·*base,·SimdFInt32·offset,·SimdFloat·*v0,·SimdFloat·*v1)'],
68 ········['../namespacegmx.xhtml#a179f05bc9899fe2b7e71d53a1a95b629',·1,·'gmx::gatherLoadBySimdIntTranspose(const·float·*base,·std::int32_t·offset,·float·*v0,·float·*v1,·float·*v2,·float·*v3)'], 
69 ········['../namespacegmx.xhtml#a0614e0463cccdf97cec36fffb2b24764',·1,·'gmx::gatherLoadBySimdIntTranspose(const·float·*base,·std::int32_t·offset,·float·*v0,·float·*v1)'],65 ········['../namespacegmx.xhtml#a6bb92443ba8da5d878c1dd85b2bcde8d',·1,·'gmx::gatherLoadBySimdIntTranspose(const·double·*base,·std::int32_t·offset,·double·*v0,·double·*v1)'],
70 ········['../namespacegmx.xhtml#a92c67d959864d2549a679f0f2245bacb',·1,·'gmx::gatherLoadBySimdIntTranspose(const·double·*base,·std::int32_t·offset,·double·*v0,·double·*v1,·double·*v2,·double·*v3)'],66 ········['../namespacegmx.xhtml#a92c67d959864d2549a679f0f2245bacb',·1,·'gmx::gatherLoadBySimdIntTranspose(const·double·*base,·std::int32_t·offset,·double·*v0,·double·*v1,·double·*v2,·double·*v3)'],
71 ········['../namespacegmx.xhtml#a6bb92443ba8da5d878c1dd85b2bcde8d',·1,·'gmx::gatherLoadBySimdIntTranspose(const·double·*base,·std::int32_t·offset,·double·*v0,·double·*v1)']67 ········['../namespacegmx.xhtml#a0614e0463cccdf97cec36fffb2b24764',·1,·'gmx::gatherLoadBySimdIntTranspose(const·float·*base,·std::int32_t·offset,·float·*v0,·float·*v1)'],
 68 ········['../namespacegmx.xhtml#a179f05bc9899fe2b7e71d53a1a95b629',·1,·'gmx::gatherLoadBySimdIntTranspose(const·float·*base,·std::int32_t·offset,·float·*v0,·float·*v1,·float·*v2,·float·*v3)'],
 69 ········['../group__module__simd.xhtml#ga1008329474744f6987edf28c4124ac24',·1,·'gmx::gatherLoadBySimdIntTranspose(const·double·*base,·SimdDInt32·offset,·SimdDouble·*v0,·SimdDouble·*v1,·SimdDouble·*v2,·SimdDouble·*v3)'],
 70 ········['../group__module__simd.xhtml#ga11385272a2b5123ca3aa3e5696e55dbc',·1,·'gmx::gatherLoadBySimdIntTranspose(const·double·*base,·SimdDInt32·offset,·SimdDouble·*v0,·SimdDouble·*v1)'],
 71 ········['../group__module__simd.xhtml#gac7ba60b7340036a984888bbca43616e4',·1,·'gmx::gatherLoadBySimdIntTranspose(const·float·*base,·SimdFInt32·offset,·SimdFloat·*v0,·SimdFloat·*v1,·SimdFloat·*v2,·SimdFloat·*v3)']
72 ····]],72 ····]],
73 ····['gatherloadtranspose_45',·['gatherloadtranspose',·['../group__module__simd.xhtml#gad1b51d9220213996033e5dce938c926f',·1,·'gmx::gatherLoadTranspose(const·double·*base,·const·std::int32_t·offset[],·SimdDouble·*v0,·SimdDouble·*v1)'],73 ····['gatherloadtranspose_45',·['gatherloadtranspose',·['../namespacegmx.xhtml#aba7ff3639534a22d4b9c7a834d7584fd',·1,·'gmx::gatherLoadTranspose(const·float·*base,·const·std::int32_t·offset[],·float·*v0,·float·*v1,·float·*v2,·float·*v3)'],
74 ········['../group__module__simd.xhtml#ga725596b415f4bca94e71321b6845bed4',·1,·'gmx::gatherLoadTranspose(const·double·*base,·const·std::int32_t·offset[],·SimdDouble·*v0,·SimdDouble·*v1,·SimdDouble·*v2,·SimdDouble·*v3)'],74 ········['../group__module__simd.xhtml#ga725596b415f4bca94e71321b6845bed4',·1,·'gmx::gatherLoadTranspose(const·double·*base,·const·std::int32_t·offset[],·SimdDouble·*v0,·SimdDouble·*v1,·SimdDouble·*v2,·SimdDouble·*v3)'],
 75 ········['../group__module__simd.xhtml#gad1b51d9220213996033e5dce938c926f',·1,·'gmx::gatherLoadTranspose(const·double·*base,·const·std::int32_t·offset[],·SimdDouble·*v0,·SimdDouble·*v1)'],
75 ········['../group__module__simd.xhtml#ga0f9f9c71226ae1d2f0065dd66e1027f0',·1,·'gmx::gatherLoadTranspose(const·float·*base,·const·std::int32_t·offset[],·SimdFloat·*v0,·SimdFloat·*v1,·SimdFloat·*v2,·SimdFloat·*v3)'],76 ········['../group__module__simd.xhtml#ga0f9f9c71226ae1d2f0065dd66e1027f0',·1,·'gmx::gatherLoadTranspose(const·float·*base,·const·std::int32_t·offset[],·SimdFloat·*v0,·SimdFloat·*v1,·SimdFloat·*v2,·SimdFloat·*v3)'],
76 ········['../group__module__simd.xhtml#ga6823a0b3cbc43eee3918b137d2b18384',·1,·'gmx::gatherLoadTranspose(const·float·*base,·const·std::int32_t·offset[],·SimdFloat·*v0,·SimdFloat·*v1)'],77 ········['../group__module__simd.xhtml#ga6823a0b3cbc43eee3918b137d2b18384',·1,·'gmx::gatherLoadTranspose(const·float·*base,·const·std::int32_t·offset[],·SimdFloat·*v0,·SimdFloat·*v1)'],
77 ········['../namespacegmx.xhtml#aba7ff3639534a22d4b9c7a834d7584fd',·1,·'gmx::gatherLoadTranspose(const·float·*base,·const·std::int32_t·offset[],·float·*v0,·float·*v1,·float·*v2,·float·*v3)'], 
78 ········['../namespacegmx.xhtml#a4c0cda66eba19ad12a50e48f848f268f',·1,·'gmx::gatherLoadTranspose(const·float·*base,·const·std::int32_t·offset[],·float·*v0,·float·*v1)'],78 ········['../namespacegmx.xhtml#a4c0cda66eba19ad12a50e48f848f268f',·1,·'gmx::gatherLoadTranspose(const·float·*base,·const·std::int32_t·offset[],·float·*v0,·float·*v1)'],
79 ········['../namespacegmx.xhtml#a94e990607fd4d48ca160fbc380597f5a',·1,·'gmx::gatherLoadTranspose(const·double·*base,·const·std::int32_t·offset[],·double·*v0,·double·*v1,·double·*v2,·double·*v3)'],79 ········['../namespacegmx.xhtml#a94e990607fd4d48ca160fbc380597f5a',·1,·'gmx::gatherLoadTranspose(const·double·*base,·const·std::int32_t·offset[],·double·*v0,·double·*v1,·double·*v2,·double·*v3)'],
80 ········['../namespacegmx.xhtml#a0c464ebd492587005bb4baefb4293072',·1,·'gmx::gatherLoadTranspose(const·double·*base,·const·std::int32_t·offset[],·double·*v0,·double·*v1)']80 ········['../namespacegmx.xhtml#a0c464ebd492587005bb4baefb4293072',·1,·'gmx::gatherLoadTranspose(const·double·*base,·const·std::int32_t·offset[],·double·*v0,·double·*v1)']
81 ····]],81 ····]],
82 ····['gatherloadtransposehsimd_46',·['gatherloadtransposehsimd',·['../group__module__simd.xhtml#gaf571e52121cd544effd263751636c974',·1,·'gmx::gatherLoadTransposeHsimd(const·double·*base0,·const·double·*base1,·const·std::int32_t·offset[],·SimdDouble·*v0,·SimdDouble·*v1)'],82 ····['gatherloadtransposehsimd_46',·['gatherloadtransposehsimd',·['../group__module__simd.xhtml#gaf571e52121cd544effd263751636c974',·1,·'gmx::gatherLoadTransposeHsimd(const·double·*base0,·const·double·*base1,·const·std::int32_t·offset[],·SimdDouble·*v0,·SimdDouble·*v1)'],
83 ········['../group__module__simd.xhtml#ga11666cd65bdfee331799b2c1dc732c60',·1,·'gmx::gatherLoadTransposeHsimd(const·float·*base0,·const·float·*base1,·const·std::int32_t·offset[],·SimdFloat·*v0,·SimdFloat·*v1)']83 ········['../group__module__simd.xhtml#ga11666cd65bdfee331799b2c1dc732c60',·1,·'gmx::gatherLoadTransposeHsimd(const·float·*base0,·const·float·*base1,·const·std::int32_t·offset[],·SimdFloat·*v0,·SimdFloat·*v1)']
84 ····]],84 ····]],
 85 ····['gatherloadubysimdinttranspose_47',·['gatherloadubysimdinttranspose',·['../group__module__simd.xhtml#gad15c3a27898a9f9dbb2963dee1a7cacf',·1,·'gmx::gatherLoadUBySimdIntTranspose(const·double·*base,·SimdDInt32·offset,·SimdDouble·*v0,·SimdDouble·*v1)'],
85 ····['gatherloadubysimdinttranspose_47',·['gatherloadubysimdinttranspose',·['../group__module__simd.xhtml#ga4b26c79db832542ab73a692f7db941c2',·1,·'gmx::gatherLoadUBySimdIntTranspose(const·float·*base,·SimdFInt32·offset,·SimdFloat·*v0,·SimdFloat·*v1)'],86 ········['../group__module__simd.xhtml#ga4b26c79db832542ab73a692f7db941c2',·1,·'gmx::gatherLoadUBySimdIntTranspose(const·float·*base,·SimdFInt32·offset,·SimdFloat·*v0,·SimdFloat·*v1)'],
86 ········['../group__module__simd.xhtml#gad15c3a27898a9f9dbb2963dee1a7cacf',·1,·'gmx::gatherLoadUBySimdIntTranspose(const·double·*base,·SimdDInt32·offset,·SimdDouble·*v0,·SimdDouble·*v1)'], 
87 ········['../namespacegmx.xhtml#a29c67b43b26cfba5ec360bf020df4c8a',·1,·'gmx::gatherLoadUBySimdIntTranspose(const·float·*base,·std::int32_t·offset,·float·*v0,·float·*v1)'],87 ········['../namespacegmx.xhtml#a29c67b43b26cfba5ec360bf020df4c8a',·1,·'gmx::gatherLoadUBySimdIntTranspose(const·float·*base,·std::int32_t·offset,·float·*v0,·float·*v1)'],
88 ········['../namespacegmx.xhtml#af74c58ce1915c6a25061153cd3b4bde8',·1,·'gmx::gatherLoadUBySimdIntTranspose(const·double·*base,·std::int32_t·offset,·double·*v0,·double·*v1)']88 ········['../namespacegmx.xhtml#af74c58ce1915c6a25061153cd3b4bde8',·1,·'gmx::gatherLoadUBySimdIntTranspose(const·double·*base,·std::int32_t·offset,·double·*v0,·double·*v1)']
89 ····]],89 ····]],
90 ····['gatherloadutranspose_48',·['gatherloadutranspose',·['../namespacegmx.xhtml#a0502844193d9fcf13648a4165a67a1a3',·1,·'gmx::gatherLoadUTranspose(const·double·*base,·const·std::int32_t·offset[],·double·*v0,·double·*v1,·double·*v2)'],90 ····['gatherloadutranspose_48',·['gatherloadutranspose',·['../namespacegmx.xhtml#a0502844193d9fcf13648a4165a67a1a3',·1,·'gmx::gatherLoadUTranspose(const·double·*base,·const·std::int32_t·offset[],·double·*v0,·double·*v1,·double·*v2)'],
91 ········['../namespacegmx.xhtml#acfefc291c66a8404f2aad767af91cb21',·1,·'gmx::gatherLoadUTranspose(const·float·*base,·const·std::int32_t·offset[],·float·*v0,·float·*v1,·float·*v2)'],91 ········['../group__module__simd.xhtml#gaafc4e2f213c40bba66c83e6524445523',·1,·'gmx::gatherLoadUTranspose(const·double·*base,·const·std::int32_t·offset[],·SimdDouble·*v0,·SimdDouble·*v1,·SimdDouble·*v2)'],
92 ········['../group__module__simd.xhtml#gaa5581add75787fa1304acdac5af0ad7d',·1,·'gmx::gatherLoadUTranspose(const·float·*base,·const·std::int32_t·offset[],·SimdFloat·*v0,·SimdFloat·*v1,·SimdFloat·*v2)'],92 ········['../group__module__simd.xhtml#gaa5581add75787fa1304acdac5af0ad7d',·1,·'gmx::gatherLoadUTranspose(const·float·*base,·const·std::int32_t·offset[],·SimdFloat·*v0,·SimdFloat·*v1,·SimdFloat·*v2)'],
93 ········['../group__module__simd.xhtml#gaafc4e2f213c40bba66c83e6524445523',·1,·'gmx::gatherLoadUTranspose(const·double·*base,·const·std::int32_t·offset[],·SimdDouble·*v0,·SimdDouble·*v1,·SimdDouble·*v2)']93 ········['../namespacegmx.xhtml#acfefc291c66a8404f2aad767af91cb21',·1,·'gmx::gatherLoadUTranspose(const·float·*base,·const·std::int32_t·offset[],·float·*v0,·float·*v1,·float·*v2)']
94 ····]],94 ····]],
95 ····['gathertest_49',·['GatherTest',·['../classgmx_1_1test_1_1anonymous__namespace_02pmegathertest_8cpp_03_1_1GatherTest.xhtml',·1,·'gmx::test::anonymous_namespace{pmegathertest.cpp}']]],95 ····['gathertest_49',·['GatherTest',·['../classgmx_1_1test_1_1anonymous__namespace_02pmegathertest_8cpp_03_1_1GatherTest.xhtml',·1,·'gmx::test::anonymous_namespace{pmegathertest.cpp}']]],
96 ····['gathertestbody_50',·['gathertestbody',·['../classgmx_1_1test_1_1anonymous__namespace_02pmegathertest_8cpp_03_1_1GatherTestBody.xhtml',·1,·'gmx::test::anonymous_namespace{pmegathertest.cpp}::GatherTestBody'],96 ····['gathertestbody_50',·['gathertestbody',·['../classgmx_1_1test_1_1anonymous__namespace_02pmegathertest_8cpp_03_1_1GatherTestBody.xhtml',·1,·'gmx::test::anonymous_namespace{pmegathertest.cpp}::GatherTestBody'],
97 ········['../classgmx_1_1test_1_1anonymous__namespace_02pmegathertest_8cpp_03_1_1GatherTestBody.xhtml#aaa55fb4d0672671e335a3c17c1647494',·1,·'gmx::test::anonymous_namespace{pmegathertest.cpp}::GatherTestBody::GatherTestBody()']97 ········['../classgmx_1_1test_1_1anonymous__namespace_02pmegathertest_8cpp_03_1_1GatherTestBody.xhtml#aaa55fb4d0672671e335a3c17c1647494',·1,·'gmx::test::anonymous_namespace{pmegathertest.cpp}::GatherTestBody::GatherTestBody()']
98 ····]],98 ····]],
99 ····['gatherunusedentries_51',·['gatherUnusedEntries',·['../namespacegmx_1_1test_1_1anonymous__namespace_02refdata_8cpp_03.xhtml#ac879386ac1155f762b4b88ba2a2e529a',·1,·'gmx::test::anonymous_namespace{refdata.cpp}']]],99 ····['gatherunusedentries_51',·['gatherUnusedEntries',·['../namespacegmx_1_1test_1_1anonymous__namespace_02refdata_8cpp_03.xhtml#ac879386ac1155f762b4b88ba2a2e529a',·1,·'gmx::test::anonymous_namespace{refdata.cpp}']]],
100 ····['gatherworkgroupsize_52',·['gatherWorkGroupSize',·['../structPmeGpuProgramImpl.xhtml#a4d0940f01c689f58f6a836319e0ecdf6',·1,·'PmeGpuProgramImpl']]],100 ····['gatherworkgroupsize_52',·['gatherWorkGroupSize',·['../structPmeGpuProgramImpl.xhtml#a4d0940f01c689f58f6a836319e0ecdf6',·1,·'PmeGpuProgramImpl']]],
101 ····['gauss1d_5f_53',·['gauss1d_',·['../classgmx_1_1GaussTransform3D_1_1Impl.xhtml#a728c7adc2d3941d37833a368c751afee',·1,·'gmx::GaussTransform3D::Impl::gauss1d_'], 
102 ········['../classgmx_1_1DensityFittingForce_1_1Impl.xhtml#aaca18108ef67ba8911fc95d61f6306f2',·1,·'gmx::DensityFittingForce::Impl::gauss1d_']101 ····['gauss1d_5f_53',·['gauss1d_',·['../classgmx_1_1DensityFittingForce_1_1Impl.xhtml#aaca18108ef67ba8911fc95d61f6306f2',·1,·'gmx::DensityFittingForce::Impl::gauss1d_'],
 102 ········['../classgmx_1_1GaussTransform3D_1_1Impl.xhtml#a728c7adc2d3941d37833a368c751afee',·1,·'gmx::GaussTransform3D::Impl::gauss1d_']
103 ····]],103 ····]],
 104 ····['gaussianon1dlattice_54',·['gaussianon1dlattice',·['../classgmx_1_1GaussianOn1DLattice.xhtml',·1,·'gmx::GaussianOn1DLattice'],
104 ····['gaussianon1dlattice_54',·['gaussianon1dlattice',·['../classgmx_1_1GaussianOn1DLattice.xhtml#af09f3b97db4e8868a08a0df75a1ba4e6',·1,·'gmx::GaussianOn1DLattice::GaussianOn1DLattice(GaussianOn1DLattice·&amp;&amp;other)·noexcept'], 
105 ········['../classgmx_1_1GaussianOn1DLattice.xhtml#aec1491a190cf9652955a6d46bd303699',·1,·'gmx::GaussianOn1DLattice::GaussianOn1DLattice(const·GaussianOn1DLattice·&amp;other)'], 
106 ········['../classgmx_1_1GaussianOn1DLattice.xhtml#afeb725d6952b76a212df5461e1a257dd',·1,·'gmx::GaussianOn1DLattice::GaussianOn1DLattice(int·numGridPointsForSpreadingHalfWidth,·real·sigma)'],105 ········['../classgmx_1_1GaussianOn1DLattice.xhtml#afeb725d6952b76a212df5461e1a257dd',·1,·'gmx::GaussianOn1DLattice::GaussianOn1DLattice(int·numGridPointsForSpreadingHalfWidth,·real·sigma)'],
107 ········['../classgmx_1_1GaussianOn1DLattice.xhtml',·1,·'gmx::GaussianOn1DLattice']106 ········['../classgmx_1_1GaussianOn1DLattice.xhtml#af09f3b97db4e8868a08a0df75a1ba4e6',·1,·'gmx::GaussianOn1DLattice::GaussianOn1DLattice(GaussianOn1DLattice·&amp;&amp;other)·noexcept'],
 107 ········['../classgmx_1_1GaussianOn1DLattice.xhtml#aec1491a190cf9652955a6d46bd303699',·1,·'gmx::GaussianOn1DLattice::GaussianOn1DLattice(const·GaussianOn1DLattice·&amp;other)']
108 ····]],108 ····]],
109 ····['gaussianspreadkernelparameters_55',·['GaussianSpreadKernelParameters',·['../structgmx_1_1GaussianSpreadKernelParameters.xhtml',·1,·'gmx']]],109 ····['gaussianspreadkernelparameters_55',·['GaussianSpreadKernelParameters',·['../structgmx_1_1GaussianSpreadKernelParameters.xhtml',·1,·'gmx']]],
110 ····['gaussiantransformspreadingrangeinmultiplesofwidth_5f_56',·['gaussianTransformSpreadingRangeInMultiplesOfWidth_',·['../structgmx_1_1DensityFittingParameters.xhtml#aa8ccc2a6b16cbba79f8efe4f19482a04',·1,·'gmx::DensityFittingParameters']]],110 ····['gaussiantransformspreadingrangeinmultiplesofwidth_5f_56',·['gaussianTransformSpreadingRangeInMultiplesOfWidth_',·['../structgmx_1_1DensityFittingParameters.xhtml#aa8ccc2a6b16cbba79f8efe4f19482a04',·1,·'gmx::DensityFittingParameters']]],
111 ····['gaussiantransformspreadingwidth_5f_57',·['gaussianTransformSpreadingWidth_',·['../structgmx_1_1DensityFittingParameters.xhtml#a0d3e3cf451f5343422ad4f191b527ec0',·1,·'gmx::DensityFittingParameters']]],111 ····['gaussiantransformspreadingwidth_5f_57',·['gaussianTransformSpreadingWidth_',·['../structgmx_1_1DensityFittingParameters.xhtml#a0d3e3cf451f5343422ad4f191b527ec0',·1,·'gmx::DensityFittingParameters']]],
112 ····['gausstransform_2ecpp_58',·['gausstransform.cpp',·['../gausstransform_8cpp.xhtml',·1,·'(Global·Namespace)'],112 ····['gausstransform_2ecpp_58',·['gausstransform.cpp',·['../tests_2gausstransform_8cpp.xhtml',·1,·'(Global·Namespace)'],
113 ········['../tests_2gausstransform_8cpp.xhtml',·1,·'(Global·Namespace)']113 ········['../gausstransform_8cpp.xhtml',·1,·'(Global·Namespace)']
114 ····]],114 ····]],
115 ····['gausstransform_2eh_59',·['gausstransform.h',·['../gausstransform_8h.xhtml',·1,·'']]],115 ····['gausstransform_2eh_59',·['gausstransform.h',·['../gausstransform_8h.xhtml',·1,·'']]],
 116 ····['gausstransform3d_60',·['gausstransform3d',·['../classgmx_1_1GaussTransform3D.xhtml#a927125c027d861b21174c07b0a22286a',·1,·'gmx::GaussTransform3D::GaussTransform3D(const·dynamicExtents3D·&amp;extent,·const·GaussianSpreadKernelParameters::Shape·&amp;globalParameters)'],
116 ····['gausstransform3d_60',·['gausstransform3d',·['../classgmx_1_1GaussTransform3D.xhtml',·1,·'gmx::GaussTransform3D'], 
117 ········['../classgmx_1_1GaussTransform3D.xhtml#ac80b1a8a0699bc7726fac2e834c1efa1',·1,·'gmx::GaussTransform3D::GaussTransform3D(GaussTransform3D·&amp;&amp;other)·noexcept'], 
118 ········['../classgmx_1_1GaussTransform3D.xhtml#a4bebacbd34dce204e961a8ec72c90108',·1,·'gmx::GaussTransform3D::GaussTransform3D(const·GaussTransform3D·&amp;other)'],117 ········['../classgmx_1_1GaussTransform3D.xhtml#a4bebacbd34dce204e961a8ec72c90108',·1,·'gmx::GaussTransform3D::GaussTransform3D(const·GaussTransform3D·&amp;other)'],
119 ········['../classgmx_1_1GaussTransform3D.xhtml#a927125c027d861b21174c07b0a22286a',·1,·'gmx::GaussTransform3D::GaussTransform3D(const·dynamicExtents3D·&amp;extent,·const·GaussianSpreadKernelParameters::Shape·&amp;globalParameters)']118 ········['../classgmx_1_1GaussTransform3D.xhtml#ac80b1a8a0699bc7726fac2e834c1efa1',·1,·'gmx::GaussTransform3D::GaussTransform3D(GaussTransform3D·&amp;&amp;other)·noexcept'],
 119 ········['../classgmx_1_1GaussTransform3D.xhtml',·1,·'gmx::GaussTransform3D']
120 ····]],120 ····]],
121 ····['gcc_5fdiagnostic_5fignore_61',·['GCC_DIAGNOSTIC_IGNORE',·['../basedefinitions_8h.xhtml#a5311f1e4e70a133a7327dd50569d07ac',·1,·'basedefinitions.h']]],121 ····['gcc_5fdiagnostic_5fignore_61',·['GCC_DIAGNOSTIC_IGNORE',·['../basedefinitions_8h.xhtml#a5311f1e4e70a133a7327dd50569d07ac',·1,·'basedefinitions.h']]],
122 ····['gcc_5fdiagnostic_5freset_62',·['GCC_DIAGNOSTIC_RESET',·['../basedefinitions_8h.xhtml#a3a34b0f19993f8d94c735a7d22cffc29',·1,·'basedefinitions.h']]],122 ····['gcc_5fdiagnostic_5freset_62',·['GCC_DIAGNOSTIC_RESET',·['../basedefinitions_8h.xhtml#a3a34b0f19993f8d94c735a7d22cffc29',·1,·'basedefinitions.h']]],
123 ····['gen_5fmaxwell_5fvelocities_2ecpp_63',·['gen_maxwell_velocities.cpp',·['../tests_2gen__maxwell__velocities_8cpp.xhtml',·1,·'']]],123 ····['gen_5fmaxwell_5fvelocities_2ecpp_63',·['gen_maxwell_velocities.cpp',·['../tests_2gen__maxwell__velocities_8cpp.xhtml',·1,·'']]],
124 ····['genbondedlinks_64',·['genBondedLinks',·['../makebondedlinks_8cpp.xhtml#adc54b75c23c6a3630bc490cd5b6b0dd0',·1,·'makebondedlinks.cpp']]],124 ····['genbondedlinks_64',·['genBondedLinks',·['../makebondedlinks_8cpp.xhtml#adc54b75c23c6a3630bc490cd5b6b0dd0',·1,·'makebondedlinks.cpp']]],
125 ····['genconf_2ecpp_65',·['genconf.cpp',·['../tests_2genconf_8cpp.xhtml',·1,·'']]],125 ····['genconf_2ecpp_65',·['genconf.cpp',·['../tests_2genconf_8cpp.xhtml',·1,·'']]],
126 ····['general_66',·['General',·['../namespacegmx_1_1test_1_1anonymous__namespace_02parrinellorahman_8cpp_03.xhtml#a776ec8348aff2ffd8b62d32d6c54bbeaa0db377921f4ce762c62526131097968f',·1,·'gmx::test::anonymous_namespace{parrinellorahman.cpp}']]],126 ····['general_66',·['General',·['../namespacegmx_1_1test_1_1anonymous__namespace_02parrinellorahman_8cpp_03.xhtml#a776ec8348aff2ffd8b62d32d6c54bbeaa0db377921f4ce762c62526131097968f',·1,·'gmx::test::anonymous_namespace{parrinellorahman.cpp}']]],
Offset 133, 40 lines modifiedOffset 133, 40 lines modified
133 ····['generatediagonalmasks_73',·['generateDiagonalMasks',·['../namespacegmx.xhtml#a75902569a0fdfb00cfa10f4d063eed7d',·1,·'gmx']]],133 ····['generatediagonalmasks_73',·['generateDiagonalMasks',·['../namespacegmx.xhtml#a75902569a0fdfb00cfa10f4d063eed7d',·1,·'gmx']]],
134 ····['generateewaldcorrectiontables_74',·['generateEwaldCorrectionTables',·['../forcetable_8h.xhtml#a09f7b6c414c61fe59569916d4106beb2',·1,·'forcetable.cpp']]],134 ····['generateewaldcorrectiontables_74',·['generateEwaldCorrectionTables',·['../forcetable_8h.xhtml#a09f7b6c414c61fe59569916d4106beb2',·1,·'forcetable.cpp']]],
135 ····['generic_75',·['Generic',·['../namespacegmx.xhtml#aa9e7df55e017bd726d027d65551bbd0ca8045a0a6c688b0635e3caccc408a1446',·1,·'gmx']]],135 ····['generic_75',·['Generic',·['../namespacegmx.xhtml#aa9e7df55e017bd726d027d65551bbd0ca8045a0a6c688b0635e3caccc408a1446',·1,·'gmx']]],
136 ····['genion_2ecpp_76',·['genion.cpp',·['../tests_2genion_8cpp.xhtml',·1,·'']]],136 ····['genion_2ecpp_76',·['genion.cpp',·['../tests_2genion_8cpp.xhtml',·1,·'']]],
137 ····['genqmmmindices_77',·['genQmmmIndices',·['../src_2gromacs_2mimic_2utilities_8h.xhtml#ac8c92f4d2b6d6276c25ae95682de13aa',·1,·'utilities.cpp']]],137 ····['genqmmmindices_77',·['genQmmmIndices',·['../src_2gromacs_2mimic_2utilities_8h.xhtml#ac8c92f4d2b6d6276c25ae95682de13aa',·1,·'utilities.cpp']]],
138 ····['genrestr_2ecpp_78',·['genrestr.cpp',·['../tests_2genrestr_8cpp.xhtml',·1,·'']]],138 ····['genrestr_2ecpp_78',·['genrestr.cpp',·['../tests_2genrestr_8cpp.xhtml',·1,·'']]],
139 ····['geometric_79',·['Geometric',·['../atomdata_8h.xhtml#a545339c6bb2aa8f6195b8ac73569cbf8aadf9f772a73f364e4ce6c52b9fae740d',·1,·'atomdata.h']]],139 ····['geometric_79',·['Geometric',·['../atomdata_8h.xhtml#a545339c6bb2aa8f6195b8ac73569cbf8aadf9f772a73f364e4ce6c52b9fae740d',·1,·'atomdata.h']]],
 140 ····['geometry_80',·['geometry',·['../structNbnxm_1_1Grid_1_1Geometry.xhtml',·1,·'Nbnxm::Grid::Geometry'],
140 ····['geometry_80',·['geometry',·['../structNbnxm_1_1Grid_1_1Geometry.xhtml#a8d9a96a8fdb5462123ab8b2a872d2010',·1,·'Nbnxm::Grid::Geometry::Geometry()'],141 ········['../structNbnxm_1_1Grid_1_1Geometry.xhtml#a8d9a96a8fdb5462123ab8b2a872d2010',·1,·'Nbnxm::Grid::Geometry::Geometry()'],
141 ········['../structt__pullcoord.xhtml#ab8bb3edab80d37b6b59871a5687f3957',·1,·'t_pullcoord::geometry'],142 ········['../structt__pullcoord.xhtml#ab8bb3edab80d37b6b59871a5687f3957',·1,·'t_pullcoord::geometry'],
142 ········['../classNbnxm_1_1Grid.xhtml#a6fa53ffa6e33e4a900ff246131cc0972',·1,·'Nbnxm::Grid::geometry()·const'],143 ········['../classNbnxm_1_1Grid.xhtml#a6fa53ffa6e33e4a900ff246131cc0972',·1,·'Nbnxm::Grid::geometry()']
143 ········['../structNbnxm_1_1Grid_1_1Geometry.xhtml',·1,·'Nbnxm::Grid::Geometry'] 
144 ····]],144 ····]],
145 ····['get_81',·['get',·['../parser__internal_8h.xhtml#a0c1fffb107955e3a6c98e6a8d44bc66b',·1,·'get():&#160;parser_internal.h'],145 ····['get_81',·['get',·['../classgmx_1_1compat_1_1not__null.xhtml#a71e17ffb21e59c1bd4317025e353e85d',·1,·'gmx::compat::not_null::get()'],
146 ········['../classgmx_1_1GlobalCommandLineHelpContext.xhtml#aaea9dd06988d683d99e633f946d7ad6e',·1,·'gmx::GlobalCommandLineHelpContext::get()'],146 ········['../classgmx_1_1GlobalCommandLineHelpContext.xhtml#aaea9dd06988d683d99e633f946d7ad6e',·1,·'gmx::GlobalCommandLineHelpContext::get()'],
147 ········['../classgmx_1_1compat_1_1not__null.xhtml#a71e17ffb21e59c1bd4317025e353e85d',·1,·'gmx::compat::not_null::get()'], 
148 ········['../classgmx_1_1SimulationInputHandle.xhtml#a9a5f2eeb74fc6dd0cad1ab613c5ffe55',·1,·'gmx::SimulationInputHandle::get()'],147 ········['../classgmx_1_1SimulationInputHandle.xhtml#a9a5f2eeb74fc6dd0cad1ab613c5ffe55',·1,·'gmx::SimulationInputHandle::get()'],
149 ········['../classgmx_1_1OptionManagerContainer.xhtml#aa4ccc4fe6ad95d34d0ac3ad64c99f3dd',·1,·'gmx::OptionManagerContainer::get()']148 ········['../classgmx_1_1OptionManagerContainer.xhtml#aa4ccc4fe6ad95d34d0ac3ad64c99f3dd',·1,·'gmx::OptionManagerContainer::get()'],
 149 ········['../parser__internal_8h.xhtml#a0c1fffb107955e3a6c98e6a8d44bc66b',·1,·'get(ValueType·*src):&#160;parser_internal.h']
150 ····]],150 ····]],
151 ····['get_5f2log_82',·['get_2log',·['../nbnxm__geometry_8h.xhtml#a8395e4ac753290707b9f0089b712c287',·1,·'nbnxm_geometry.h']]],151 ····['get_5f2log_82',·['get_2log',·['../nbnxm__geometry_8h.xhtml#a8395e4ac753290707b9f0089b712c287',·1,·'nbnxm_geometry.h']]],
152 ····['get_5fa_5fline_83',·['get_a_line',·['../strdb_8h.xhtml#a0cd472153523204686e891341870765e',·1,·'strdb.cpp']]],152 ····['get_5fa_5fline_83',·['get_a_line',·['../strdb_8h.xhtml#a0cd472153523204686e891341870765e',·1,·'strdb.cpp']]],
153 ····['get_5facffitfn_84',·['get_acffitfn',·['../autocorr_8cpp.xhtml#ae8203eca8a282a6a6c3193eb7434e740',·1,·'get_acffitfn():&#160;autocorr.cpp'],153 ····['get_5facffitfn_84',·['get_acffitfn',·['../autocorr_8h.xhtml#ae8203eca8a282a6a6c3193eb7434e740',·1,·'get_acffitfn():&#160;autocorr.cpp'],
154 ········['../autocorr_8h.xhtml#ae8203eca8a282a6a6c3193eb7434e740',·1,·'get_acffitfn():&#160;autocorr.cpp']154 ········['../autocorr_8cpp.xhtml#ae8203eca8a282a6a6c3193eb7434e740',·1,·'get_acffitfn():&#160;autocorr.cpp']
155 ····]],155 ····]],
156 ····['get_5facfnout_85',·['get_acfnout',·['../autocorr_8h.xhtml#a6ffe718811a1de496d0d03c2110907ca',·1,·'get_acfnout():&#160;autocorr.cpp'],156 ····['get_5facfnout_85',·['get_acfnout',·['../autocorr_8h.xhtml#a6ffe718811a1de496d0d03c2110907ca',·1,·'get_acfnout():&#160;autocorr.cpp'],
157 ········['../autocorr_8cpp.xhtml#a6ffe718811a1de496d0d03c2110907ca',·1,·'get_acfnout():&#160;autocorr.cpp']157 ········['../autocorr_8cpp.xhtml#a6ffe718811a1de496d0d03c2110907ca',·1,·'get_acfnout():&#160;autocorr.cpp']
158 ····]],158 ····]],
159 ····['get_5fallocator_86',·['get_allocator',·['../classgmx_1_1PaddedVector.xhtml#a0bae42a82df682e19ac61bc89a6a022a',·1,·'gmx::PaddedVector']]],159 ····['get_5fallocator_86',·['get_allocator',·['../classgmx_1_1PaddedVector.xhtml#a0bae42a82df682e19ac61bc89a6a022a',·1,·'gmx::PaddedVector']]],
160 ····['get_5fcenter_87',·['get_center',·['../groupcoord_8h.xhtml#ac732a95420f31b9a44c7a4abfc371357',·1,·'groupcoord.cpp']]],160 ····['get_5fcenter_87',·['get_center',·['../groupcoord_8h.xhtml#ac732a95420f31b9a44c7a4abfc371357',·1,·'groupcoord.cpp']]],
161 ····['get_5fcenter_5fcomm_88',·['get_center_comm',·['../groupcoord_8h.xhtml#a2018383475eefe6a12a0f43a4bf12741',·1,·'groupcoord.cpp']]],161 ····['get_5fcenter_5fcomm_88',·['get_center_comm',·['../groupcoord_8h.xhtml#a2018383475eefe6a12a0f43a4bf12741',·1,·'groupcoord.cpp']]],
162 ····['get_5fcommbuffer_5fcounts_89',·['get_commbuffer_counts',·['../atomdistribution_8h.xhtml#a6324027a460a49578da9eb57c56eff39',·1,·'atomdistribution.cpp']]],162 ····['get_5fcommbuffer_5fcounts_89',·['get_commbuffer_counts',·['../atomdistribution_8h.xhtml#a6324027a460a49578da9eb57c56eff39',·1,·'atomdistribution.cpp']]],
163 ····['get_5fcompartment_5fboundaries_90',·['get_compartment_boundaries',·['../gromacs_2swap_2swapcoords_8cpp.xhtml#a086f8087bf717b593edec6fa94e2c43c',·1,·'swapcoords.cpp']]],163 ····['get_5fcompartment_5fboundaries_90',·['get_compartment_boundaries',·['../gromacs_2swap_2swapcoords_8cpp.xhtml#a086f8087bf717b593edec6fa94e2c43c',·1,·'swapcoords.cpp']]],
164 ····['get_5fddbox_91',·['get_ddbox',·['../box_8cpp.xhtml#a8571d7e8a8a2b719ff62946762f95247',·1,·'get_ddbox(const·ivec·&amp;numDomains,·const·t_inputrec·&amp;ir,·const·matrix·box,·gmx::ArrayRef&lt;·const·gmx::RVec·&gt;·x):&#160;box.cpp'],164 ····['get_5fddbox_91',·['get_ddbox',·['../box_8h.xhtml#a8571d7e8a8a2b719ff62946762f95247',·1,·'get_ddbox(const·ivec·&amp;numDomains,·const·t_inputrec·&amp;ir,·const·matrix·box,·gmx::ArrayRef&lt;·const·gmx::RVec·&gt;·x):&#160;box.cpp'],
165 ········['../box_8h.xhtml#a8571d7e8a8a2b719ff62946762f95247',·1,·'get_ddbox(const·ivec·&amp;numDomains,·const·t_inputrec·&amp;ir,·const·matrix·box,·gmx::ArrayRef&lt;·const·gmx::RVec·&gt;·x):&#160;box.cpp']165 ········['../box_8cpp.xhtml#a8571d7e8a8a2b719ff62946762f95247',·1,·'get_ddbox(const·ivec·&amp;numDomains,·const·t_inputrec·&amp;ir,·const·matrix·box,·gmx::ArrayRef&lt;·const·gmx::RVec·&gt;·x):&#160;box.cpp']
166 ····]],166 ····]],
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170 ····['get_5findex_5fof_5fdistant_5fatom_95',·['get_index_of_distant_atom',·['../gromacs_2swap_2swapcoords_8cpp.xhtml#aee789cd0e8c00d7ea9bbc4ca285cb993',·1,·'swapcoords.cpp']]],170 ····['get_5findex_5fof_5fdistant_5fatom_95',·['get_index_of_distant_atom',·['../gromacs_2swap_2swapcoords_8cpp.xhtml#aee789cd0e8c00d7ea9bbc4ca285cb993',·1,·'swapcoords.cpp']]],
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6 ····['abstractoptionstorage_2ecpp_4',·['abstractoptionstorage.cpp',·['../abstractoptionstorage_8cpp.xhtml',·1,·'']]],6 ····['abstractoptionstorage_2ecpp_4',·['abstractoptionstorage.cpp',·['../abstractoptionstorage_8cpp.xhtml',·1,·'']]],
7 ····['abstractoptionstorage_2eh_5',·['abstractoptionstorage.h',·['../abstractoptionstorage_8h.xhtml',·1,·'']]],7 ····['abstractoptionstorage_2eh_5',·['abstractoptionstorage.h',·['../abstractoptionstorage_8h.xhtml',·1,·'']]],
8 ····['abstractsection_2ecpp_6',·['abstractsection.cpp',·['../abstractsection_8cpp.xhtml',·1,·'']]],8 ····['abstractsection_2ecpp_6',·['abstractsection.cpp',·['../abstractsection_8cpp.xhtml',·1,·'']]],
9 ····['abstractsection_2eh_7',·['abstractsection.h',·['../abstractsection_8h.xhtml',·1,·'']]],9 ····['abstractsection_2eh_7',·['abstractsection.h',·['../abstractsection_8h.xhtml',·1,·'']]],
10 ····['accessor_5fpolicy_2ecpp_8',·['accessor_policy.cpp',·['../accessor__policy_8cpp.xhtml',·1,·'']]],10 ····['accessor_5fpolicy_2ecpp_8',·['accessor_policy.cpp',·['../accessor__policy_8cpp.xhtml',·1,·'']]],
11 ····['accessor_5fpolicy_2eh_9',·['accessor_policy.h',·['../accessor__policy_8h.xhtml',·1,·'']]],11 ····['accessor_5fpolicy_2eh_9',·['accessor_policy.h',·['../accessor__policy_8h.xhtml',·1,·'']]],
12 ····['alignedallocator_2ecpp_10',·['alignedallocator.cpp',·['../alignedallocator_8cpp.xhtml',·1,·'(Global·Namespace)'],12 ····['alignedallocator_2ecpp_10',·['alignedallocator.cpp',·['../tests_2alignedallocator_8cpp.xhtml',·1,·'(Global·Namespace)'],
13 ········['../tests_2alignedallocator_8cpp.xhtml',·1,·'(Global·Namespace)']13 ········['../alignedallocator_8cpp.xhtml',·1,·'(Global·Namespace)']
14 ····]],14 ····]],
15 ····['alignedallocator_2eh_11',·['alignedallocator.h',·['../alignedallocator_8h.xhtml',·1,·'']]],15 ····['alignedallocator_2eh_11',·['alignedallocator.h',·['../alignedallocator_8h.xhtml',·1,·'']]],
16 ····['alignedallocator_5fimpl_2eh_12',·['alignedallocator_impl.h',·['../alignedallocator__impl_8h.xhtml',·1,·'']]],16 ····['alignedallocator_5fimpl_2eh_12',·['alignedallocator_impl.h',·['../alignedallocator__impl_8h.xhtml',·1,·'']]],
17 ····['allocator_2eh_13',·['allocator.h',·['../allocator_8h.xhtml',·1,·'']]],17 ····['allocator_2eh_13',·['allocator.h',·['../allocator_8h.xhtml',·1,·'']]],
18 ····['analysisdata_2ecpp_14',·['analysisdata.cpp',·['../tests_2analysisdata_8cpp.xhtml',·1,·'(Global·Namespace)'],18 ····['analysisdata_2ecpp_14',·['analysisdata.cpp',·['../tests_2analysisdata_8cpp.xhtml',·1,·'(Global·Namespace)'],
19 ········['../analysisdata_8cpp.xhtml',·1,·'(Global·Namespace)']19 ········['../analysisdata_8cpp.xhtml',·1,·'(Global·Namespace)']
20 ····]],20 ····]],
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25 ····]],25 ····]],
26 ····['analysissettings_2ecpp_18',·['analysissettings.cpp',·['../analysissettings_8cpp.xhtml',·1,·'']]],26 ····['analysissettings_2ecpp_18',·['analysissettings.cpp',·['../analysissettings_8cpp.xhtml',·1,·'']]],
27 ····['analysissettings_2eh_19',·['analysissettings.h',·['../analysissettings_8h.xhtml',·1,·'']]],27 ····['analysissettings_2eh_19',·['analysissettings.h',·['../analysissettings_8h.xhtml',·1,·'']]],
28 ····['analysissettings_5fimpl_2eh_20',·['analysissettings_impl.h',·['../analysissettings__impl_8h.xhtml',·1,·'']]],28 ····['analysissettings_5fimpl_2eh_20',·['analysissettings_impl.h',·['../analysissettings__impl_8h.xhtml',·1,·'']]],
29 ····['andersentemperaturecoupling_2ecpp_21',·['andersentemperaturecoupling.cpp',·['../andersentemperaturecoupling_8cpp.xhtml',·1,·'']]],29 ····['andersentemperaturecoupling_2ecpp_21',·['andersentemperaturecoupling.cpp',·['../andersentemperaturecoupling_8cpp.xhtml',·1,·'']]],
30 ····['andersentemperaturecoupling_2eh_22',·['andersentemperaturecoupling.h',·['../andersentemperaturecoupling_8h.xhtml',·1,·'']]],30 ····['andersentemperaturecoupling_2eh_22',·['andersentemperaturecoupling.h',·['../andersentemperaturecoupling_8h.xhtml',·1,·'']]],
31 ····['angle_2ecpp_23',·['angle.cpp',·['../tests_2angle_8cpp.xhtml',·1,·'(Global·Namespace)'],31 ····['angle_2ecpp_23',·['angle.cpp',·['../modules_2angle_8cpp.xhtml',·1,·'(Global·Namespace)'],
32 ········['../modules_2angle_8cpp.xhtml',·1,·'(Global·Namespace)']32 ········['../tests_2angle_8cpp.xhtml',·1,·'(Global·Namespace)']
33 ····]],33 ····]],
34 ····['angle_2eh_24',·['angle.h',·['../angle_8h.xhtml',·1,·'']]],34 ····['angle_2eh_24',·['angle.h',·['../angle_8h.xhtml',·1,·'']]],
35 ····['any_2ecpp_25',·['any.cpp',·['../any_8cpp.xhtml',·1,·'']]],35 ····['any_2ecpp_25',·['any.cpp',·['../any_8cpp.xhtml',·1,·'']]],
36 ····['any_2eh_26',·['any.h',·['../any_8h.xhtml',·1,·'']]],36 ····['any_2eh_26',·['any.h',·['../any_8h.xhtml',·1,·'']]],
37 ····['architecture_2eh_27',·['architecture.h',·['../architecture_8h.xhtml',·1,·'']]],37 ····['architecture_2eh_27',·['architecture.h',·['../architecture_8h.xhtml',·1,·'']]],
38 ····['arraydata_2ecpp_28',·['arraydata.cpp',·['../tests_2arraydata_8cpp.xhtml',·1,·'(Global·Namespace)'],38 ····['arraydata_2ecpp_28',·['arraydata.cpp',·['../tests_2arraydata_8cpp.xhtml',·1,·'(Global·Namespace)'],
39 ········['../arraydata_8cpp.xhtml',·1,·'(Global·Namespace)']39 ········['../arraydata_8cpp.xhtml',·1,·'(Global·Namespace)']
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31 ········['../include_2gromacs_2utility_2bitmask_8h.xhtml',·1,·'(Global·Namespace)']31 ········['../include_2gromacs_2utility_2bitmask_8h.xhtml',·1,·'(Global·Namespace)']
32 ····]],32 ····]],
33 ····['bonded_2ecpp_29',·['bonded.cpp',·['../tests_2bonded_8cpp.xhtml',·1,·'(Global·Namespace)'],33 ····['bonded_2ecpp_29',·['bonded.cpp',·['../tests_2bonded_8cpp.xhtml',·1,·'(Global·Namespace)'],
34 ········['../bonded_8cpp.xhtml',·1,·'(Global·Namespace)']34 ········['../bonded_8cpp.xhtml',·1,·'(Global·Namespace)']
35 ····]],35 ····]],
36 ····['bonded_2eh_30',·['bonded.h',·['../bonded_8h.xhtml',·1,·'']]],36 ····['bonded_2eh_30',·['bonded.h',·['../bonded_8h.xhtml',·1,·'']]],
37 ····['booltype_2ecpp_31',·['booltype.cpp',·['../tests_2booltype_8cpp.xhtml',·1,·'(Global·Namespace)'],37 ····['booltype_2ecpp_31',·['booltype.cpp',·['../booltype_8cpp.xhtml',·1,·'(Global·Namespace)'],
38 ········['../booltype_8cpp.xhtml',·1,·'(Global·Namespace)']38 ········['../tests_2booltype_8cpp.xhtml',·1,·'(Global·Namespace)']
39 ····]],39 ····]],
40 ····['booltype_2eh_32',·['booltype.h',·['../booltype_8h.xhtml',·1,·'']]],40 ····['booltype_2eh_32',·['booltype.h',·['../booltype_8h.xhtml',·1,·'']]],
41 ····['bootstrap_5floadstore_2ecpp_33',·['bootstrap_loadstore.cpp',·['../bootstrap__loadstore_8cpp.xhtml',·1,·'']]],41 ····['bootstrap_5floadstore_2ecpp_33',·['bootstrap_loadstore.cpp',·['../bootstrap__loadstore_8cpp.xhtml',·1,·'']]],
42 ····['boundingboxes_2eh_34',·['boundingboxes.h',·['../boundingboxes_8h.xhtml',·1,·'']]],42 ····['boundingboxes_2eh_34',·['boundingboxes.h',·['../boundingboxes_8h.xhtml',·1,·'']]],
43 ····['box_2ecpp_35',·['box.cpp',·['../box_8cpp.xhtml',·1,·'']]],43 ····['box_2ecpp_35',·['box.cpp',·['../box_8cpp.xhtml',·1,·'']]],
44 ····['box_2eh_36',·['box.h',·['../box_8h.xhtml',·1,·'']]],44 ····['box_2eh_36',·['box.h',·['../box_8h.xhtml',·1,·'']]],
45 ····['boxdeformation_2ecpp_37',·['boxdeformation.cpp',·['../gromacs_2mdlib_2boxdeformation_8cpp.xhtml',·1,·'(Global·Namespace)'],45 ····['boxdeformation_2ecpp_37',·['boxdeformation.cpp',·['../programs_2mdrun_2tests_2boxdeformation_8cpp.xhtml',·1,·'(Global·Namespace)'],
46 ········['../programs_2mdrun_2tests_2boxdeformation_8cpp.xhtml',·1,·'(Global·Namespace)']46 ········['../gromacs_2mdlib_2boxdeformation_8cpp.xhtml',·1,·'(Global·Namespace)']
47 ····]],47 ····]],
48 ····['boxdeformation_2eh_38',·['boxdeformation.h',·['../boxdeformation_8h.xhtml',·1,·'']]],48 ····['boxdeformation_2eh_38',·['boxdeformation.h',·['../boxdeformation_8h.xhtml',·1,·'']]],
49 ····['boxmatrix_2ecpp_39',·['boxmatrix.cpp',·['../boxmatrix_8cpp.xhtml',·1,·'']]],49 ····['boxmatrix_2ecpp_39',·['boxmatrix.cpp',·['../boxmatrix_8cpp.xhtml',·1,·'']]],
50 ····['boxmatrix_2eh_40',·['boxmatrix.h',·['../boxmatrix_8h.xhtml',·1,·'']]],50 ····['boxmatrix_2eh_40',·['boxmatrix.h',·['../boxmatrix_8h.xhtml',·1,·'']]],
51 ····['boxutilities_2ecpp_41',·['boxutilities.cpp',·['../boxutilities_8cpp.xhtml',·1,·'']]],51 ····['boxutilities_2ecpp_41',·['boxutilities.cpp',·['../boxutilities_8cpp.xhtml',·1,·'']]],
52 ····['broadcaststructs_2eh_42',·['broadcaststructs.h',·['../broadcaststructs_8h.xhtml',·1,·'']]],52 ····['broadcaststructs_2eh_42',·['broadcaststructs.h',·['../broadcaststructs_8h.xhtml',·1,·'']]],
53 ····['builder_2ecpp_43',·['builder.cpp',·['../builder_8cpp.xhtml',·1,·'']]],53 ····['builder_2ecpp_43',·['builder.cpp',·['../builder_8cpp.xhtml',·1,·'']]],
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30 ····]],30 ····]],
31 ····['replicaexchange_2eh_23',·['replicaexchange.h',·['../replicaexchange_8h.xhtml',·1,·'']]],31 ····['replicaexchange_2eh_23',·['replicaexchange.h',·['../replicaexchange_8h.xhtml',·1,·'']]],
32 ····['replicaexchange_5fequivalence_2ecpp_24',·['replicaexchange_equivalence.cpp',·['../replicaexchange__equivalence_8cpp.xhtml',·1,·'']]],32 ····['replicaexchange_5fequivalence_2ecpp_24',·['replicaexchange_equivalence.cpp',·['../replicaexchange__equivalence_8cpp.xhtml',·1,·'']]],
33 ····['report_5fmethods_2ecpp_25',·['report_methods.cpp',·['../tests_2report__methods_8cpp.xhtml',·1,·'']]],33 ····['report_5fmethods_2ecpp_25',·['report_methods.cpp',·['../tests_2report__methods_8cpp.xhtml',·1,·'']]],
34 ····['reportgpuusage_2ecpp_26',·['reportgpuusage.cpp',·['../reportgpuusage_8cpp.xhtml',·1,·'']]],34 ····['reportgpuusage_2ecpp_26',·['reportgpuusage.cpp',·['../reportgpuusage_8cpp.xhtml',·1,·'']]],
35 ····['reportgpuusage_2eh_27',·['reportgpuusage.h',·['../reportgpuusage_8h.xhtml',·1,·'']]],35 ····['reportgpuusage_2eh_27',·['reportgpuusage.h',·['../reportgpuusage_8h.xhtml',·1,·'']]],
36 ····['requirements_2ecpp_28',·['requirements.cpp',·['../tests_2requirements_8cpp.xhtml',·1,·'(Global·Namespace)'],36 ····['requirements_2ecpp_28',·['requirements.cpp',·['../requirements_8cpp.xhtml',·1,·'(Global·Namespace)'],
37 ········['../requirements_8cpp.xhtml',·1,·'(Global·Namespace)']37 ········['../tests_2requirements_8cpp.xhtml',·1,·'(Global·Namespace)']
38 ····]],38 ····]],
39 ····['requirements_2eh_29',·['requirements.h',·['../tests_2requirements_8h.xhtml',·1,·'(Global·Namespace)'],39 ····['requirements_2eh_29',·['requirements.h',·['../requirements_8h.xhtml',·1,·'(Global·Namespace)'],
40 ········['../requirements_8h.xhtml',·1,·'(Global·Namespace)']40 ········['../tests_2requirements_8h.xhtml',·1,·'(Global·Namespace)']
41 ····]],41 ····]],
42 ····['rerun_2ecpp_30',·['rerun.cpp',·['../gromacs_2mdrun_2rerun_8cpp.xhtml',·1,·'(Global·Namespace)'],42 ····['rerun_2ecpp_30',·['rerun.cpp',·['../gromacs_2mdrun_2rerun_8cpp.xhtml',·1,·'(Global·Namespace)'],
43 ········['../programs_2mdrun_2tests_2rerun_8cpp.xhtml',·1,·'(Global·Namespace)']43 ········['../programs_2mdrun_2tests_2rerun_8cpp.xhtml',·1,·'(Global·Namespace)']
44 ····]],44 ····]],
45 ····['resall_2eh_31',·['resall.h',·['../resall_8h.xhtml',·1,·'']]],45 ····['resall_2eh_31',·['resall.h',·['../resall_8h.xhtml',·1,·'']]],
46 ····['resethandler_2ecpp_32',·['resethandler.cpp',·['../resethandler_8cpp.xhtml',·1,·'']]],46 ····['resethandler_2ecpp_32',·['resethandler.cpp',·['../resethandler_8cpp.xhtml',·1,·'']]],
47 ····['resethandler_2eh_33',·['resethandler.h',·['../resethandler_8h.xhtml',·1,·'']]],47 ····['resethandler_2eh_33',·['resethandler.h',·['../resethandler_8h.xhtml',·1,·'']]],
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71 ····]],71 ····]],
72 ····['setstarttime_2eh_56',·['setstarttime.h',·['../setstarttime_8h.xhtml',·1,·'']]],72 ····['setstarttime_2eh_56',·['setstarttime.h',·['../setstarttime_8h.xhtml',·1,·'']]],
73 ····['settimestep_2ecpp_57',·['settimestep.cpp',·['../tests_2settimestep_8cpp.xhtml',·1,·'(Global·Namespace)'],73 ····['settimestep_2ecpp_57',·['settimestep.cpp',·['../tests_2settimestep_8cpp.xhtml',·1,·'(Global·Namespace)'],
74 ········['../outputadapters_2settimestep_8cpp.xhtml',·1,·'(Global·Namespace)']74 ········['../outputadapters_2settimestep_8cpp.xhtml',·1,·'(Global·Namespace)']
75 ····]],75 ····]],
76 ····['settimestep_2eh_58',·['settimestep.h',·['../settimestep_8h.xhtml',·1,·'']]],76 ····['settimestep_2eh_58',·['settimestep.h',·['../settimestep_8h.xhtml',·1,·'']]],
77 ····['settle_2ecpp_59',·['settle.cpp',·['../settle_8cpp.xhtml',·1,·'(Global·Namespace)'],77 ····['settle_2ecpp_59',·['settle.cpp',·['../tests_2settle_8cpp.xhtml',·1,·'(Global·Namespace)'],
78 ········['../tests_2settle_8cpp.xhtml',·1,·'(Global·Namespace)']78 ········['../settle_8cpp.xhtml',·1,·'(Global·Namespace)']
79 ····]],79 ····]],
80 ····['settle_2eh_60',·['settle.h',·['../settle_8h.xhtml',·1,·'']]],80 ····['settle_2eh_60',·['settle.h',·['../settle_8h.xhtml',·1,·'']]],
81 ····['settle_5fgpu_2ecpp_61',·['settle_gpu.cpp',·['../settle__gpu_8cpp.xhtml',·1,·'']]],81 ····['settle_5fgpu_2ecpp_61',·['settle_gpu.cpp',·['../settle__gpu_8cpp.xhtml',·1,·'']]],
82 ····['settle_5fgpu_2eh_62',·['settle_gpu.h',·['../settle__gpu_8h.xhtml',·1,·'']]],82 ····['settle_5fgpu_2eh_62',·['settle_gpu.h',·['../settle__gpu_8h.xhtml',·1,·'']]],
83 ····['settle_5fgpu_5finternal_2eh_63',·['settle_gpu_internal.h',·['../settle__gpu__internal_8h.xhtml',·1,·'']]],83 ····['settle_5fgpu_5finternal_2eh_63',·['settle_gpu_internal.h',·['../settle__gpu__internal_8h.xhtml',·1,·'']]],
84 ····['settle_5fgpu_5finternal_5fsycl_2ecpp_64',·['settle_gpu_internal_sycl.cpp',·['../settle__gpu__internal__sycl_8cpp.xhtml',·1,·'']]],84 ····['settle_5fgpu_5finternal_5fsycl_2ecpp_64',·['settle_gpu_internal_sycl.cpp',·['../settle__gpu__internal__sycl_8cpp.xhtml',·1,·'']]],
85 ····['settletestdata_2ecpp_65',·['settletestdata.cpp',·['../settletestdata_8cpp.xhtml',·1,·'']]],85 ····['settletestdata_2ecpp_65',·['settletestdata.cpp',·['../settletestdata_8cpp.xhtml',·1,·'']]],
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91 ····['setvelocities_2eh_71',·['setvelocities.h',·['../setvelocities_8h.xhtml',·1,·'']]],91 ····['setvelocities_2eh_71',·['setvelocities.h',·['../setvelocities_8h.xhtml',·1,·'']]],
92 ····['shake_2ecpp_72',·['shake.cpp',·['../shake_8cpp.xhtml',·1,·'']]],92 ····['shake_2ecpp_72',·['shake.cpp',·['../shake_8cpp.xhtml',·1,·'']]],
93 ····['shake_2eh_73',·['shake.h',·['../shake_8h.xhtml',·1,·'']]],93 ····['shake_2eh_73',·['shake.h',·['../shake_8h.xhtml',·1,·'']]],
94 ····['shellcompletions_2ecpp_74',·['shellcompletions.cpp',·['../shellcompletions_8cpp.xhtml',·1,·'']]],94 ····['shellcompletions_2ecpp_74',·['shellcompletions.cpp',·['../shellcompletions_8cpp.xhtml',·1,·'']]],
95 ····['shellcompletions_2eh_75',·['shellcompletions.h',·['../shellcompletions_8h.xhtml',·1,·'']]],95 ····['shellcompletions_2eh_75',·['shellcompletions.h',·['../shellcompletions_8h.xhtml',·1,·'']]],
96 ····['signallers_2ecpp_76',·['signallers.cpp',·['../signallers_8cpp.xhtml',·1,·'']]],96 ····['signallers_2ecpp_76',·['signallers.cpp',·['../signallers_8cpp.xhtml',·1,·'']]],
97 ····['signallers_2eh_77',·['signallers.h',·['../signallers_8h.xhtml',·1,·'']]],97 ····['signallers_2eh_77',·['signallers.h',·['../signallers_8h.xhtml',·1,·'']]],
98 ····['simd_2eh_78',·['simd.h',·['../include_2gromacs_2simd_2simd_8h.xhtml',·1,·'(Global·Namespace)'],98 ····['simd_2eh_78',·['simd.h',·['../tests_2simd_8h.xhtml',·1,·'(Global·Namespace)'],
99 ········['../tests_2simd_8h.xhtml',·1,·'(Global·Namespace)']99 ········['../include_2gromacs_2simd_2simd_8h.xhtml',·1,·'(Global·Namespace)']
100 ····]],100 ····]],
101 ····['simd4_2eh_79',·['simd4.h',·['../simd4_8h.xhtml',·1,·'']]],101 ····['simd4_2eh_79',·['simd4.h',·['../simd4_8h.xhtml',·1,·'']]],
102 ····['simd_5fkernel_2eh_80',·['simd_kernel.h',·['../simd__kernel_8h.xhtml',·1,·'']]],102 ····['simd_5fkernel_2eh_80',·['simd_kernel.h',·['../simd__kernel_8h.xhtml',·1,·'']]],
103 ····['simd_5fload_5fstore_5ffunctions_2eh_81',·['simd_load_store_functions.h',·['../simd__load__store__functions_8h.xhtml',·1,·'']]],103 ····['simd_5fload_5fstore_5ffunctions_2eh_81',·['simd_load_store_functions.h',·['../simd__load__store__functions_8h.xhtml',·1,·'']]],
104 ····['simd_5fmath_2eh_82',·['simd_math.h',·['../simd__math_8h.xhtml',·1,·'']]],104 ····['simd_5fmath_2eh_82',·['simd_math.h',·['../simd__math_8h.xhtml',·1,·'']]],
105 ····['simd_5fmemory_2ecpp_83',·['simd_memory.cpp',·['../simd__memory_8cpp.xhtml',·1,·'']]],105 ····['simd_5fmemory_2ecpp_83',·['simd_memory.cpp',·['../simd__memory_8cpp.xhtml',·1,·'']]],
106 ····['simd_5fmemory_2eh_84',·['simd_memory.h',·['../simd__memory_8h.xhtml',·1,·'']]],106 ····['simd_5fmemory_2eh_84',·['simd_memory.h',·['../simd__memory_8h.xhtml',·1,·'']]],
Offset 110, 16 lines modifiedOffset 110, 16 lines modified
110 ····['simple_5fmdrun_2ecpp_88',·['simple_mdrun.cpp',·['../simple__mdrun_8cpp.xhtml',·1,·'']]],110 ····['simple_5fmdrun_2ecpp_88',·['simple_mdrun.cpp',·['../simple__mdrun_8cpp.xhtml',·1,·'']]],
111 ····['simulation_5fworkload_2eh_89',·['simulation_workload.h',·['../simulation__workload_8h.xhtml',·1,·'']]],111 ····['simulation_5fworkload_2eh_89',·['simulation_workload.h',·['../simulation__workload_8h.xhtml',·1,·'']]],
112 ····['simulationcontext_2eh_90',·['simulationcontext.h',·['../simulationcontext_8h.xhtml',·1,·'']]],112 ····['simulationcontext_2eh_90',·['simulationcontext.h',·['../simulationcontext_8h.xhtml',·1,·'']]],
113 ····['simulationdatabase_2ecpp_91',·['simulationdatabase.cpp',·['../simulationdatabase_8cpp.xhtml',·1,·'']]],113 ····['simulationdatabase_2ecpp_91',·['simulationdatabase.cpp',·['../simulationdatabase_8cpp.xhtml',·1,·'']]],
114 ····['simulationdatabase_2eh_92',·['simulationdatabase.h',·['../simulationdatabase_8h.xhtml',·1,·'']]],114 ····['simulationdatabase_2eh_92',·['simulationdatabase.h',·['../simulationdatabase_8h.xhtml',·1,·'']]],
115 ····['simulationinput_2eh_93',·['simulationinput.h',·['../simulationinput_8h.xhtml',·1,·'']]],115 ····['simulationinput_2eh_93',·['simulationinput.h',·['../simulationinput_8h.xhtml',·1,·'']]],
116 ····['simulationinputhandle_2eh_94',·['simulationinputhandle.h',·['../simulationinputhandle_8h.xhtml',·1,·'']]],116 ····['simulationinputhandle_2eh_94',·['simulationinputhandle.h',·['../simulationinputhandle_8h.xhtml',·1,·'']]],
117 ····['simulationsignal_2ecpp_95',·['simulationsignal.cpp',·['../tests_2simulationsignal_8cpp.xhtml',·1,·'(Global·Namespace)'],117 ····['simulationsignal_2ecpp_95',·['simulationsignal.cpp',·['../simulationsignal_8cpp.xhtml',·1,·'(Global·Namespace)'],
118 ········['../simulationsignal_8cpp.xhtml',·1,·'(Global·Namespace)']118 ········['../tests_2simulationsignal_8cpp.xhtml',·1,·'(Global·Namespace)']
119 ····]],119 ····]],
120 ····['simulationsignal_2eh_96',·['simulationsignal.h',·['../simulationsignal_8h.xhtml',·1,·'']]],120 ····['simulationsignal_2eh_96',·['simulationsignal.h',·['../simulationsignal_8h.xhtml',·1,·'']]],
121 ····['simulator_2ecpp_97',·['simulator.cpp',·['../simulator_8cpp.xhtml',·1,·'']]],121 ····['simulator_2ecpp_97',·['simulator.cpp',·['../simulator_8cpp.xhtml',·1,·'']]],
122 ····['simulatoralgorithm_2ecpp_98',·['simulatoralgorithm.cpp',·['../simulatoralgorithm_8cpp.xhtml',·1,·'']]],122 ····['simulatoralgorithm_2ecpp_98',·['simulatoralgorithm.cpp',·['../simulatoralgorithm_8cpp.xhtml',·1,·'']]],
123 ····['simulatoralgorithm_2eh_99',·['simulatoralgorithm.h',·['../simulatoralgorithm_8h.xhtml',·1,·'']]],123 ····['simulatoralgorithm_2eh_99',·['simulatoralgorithm.h',·['../simulatoralgorithm_8h.xhtml',·1,·'']]],
124 ····['simulatorbuilder_2ecpp_100',·['simulatorbuilder.cpp',·['../simulatorbuilder_8cpp.xhtml',·1,·'']]],124 ····['simulatorbuilder_2ecpp_100',·['simulatorbuilder.cpp',·['../simulatorbuilder_8cpp.xhtml',·1,·'']]],
125 ····['simulatorcomparison_2ecpp_101',·['simulatorcomparison.cpp',·['../simulatorcomparison_8cpp.xhtml',·1,·'']]],125 ····['simulatorcomparison_2ecpp_101',·['simulatorcomparison.cpp',·['../simulatorcomparison_8cpp.xhtml',·1,·'']]],
Offset 149, 16 lines modifiedOffset 149, 16 lines modified
149 ····['statepropagatordata_2ecpp_125',·['statepropagatordata.cpp',·['../statepropagatordata_8cpp.xhtml',·1,·'']]],149 ····['statepropagatordata_2ecpp_125',·['statepropagatordata.cpp',·['../statepropagatordata_8cpp.xhtml',·1,·'']]],
150 ····['statepropagatordata_2eh_126',·['statepropagatordata.h',·['../statepropagatordata_8h.xhtml',·1,·'']]],150 ····['statepropagatordata_2eh_126',·['statepropagatordata.h',·['../statepropagatordata_8h.xhtml',·1,·'']]],
151 ····['statistics_2eh_127',·['statistics.h',·['../statistics_8h.xhtml',·1,·'']]],151 ····['statistics_2eh_127',·['statistics.h',·['../statistics_8h.xhtml',·1,·'']]],
152 ····['stdiohelper_2ecpp_128',·['stdiohelper.cpp',·['../stdiohelper_8cpp.xhtml',·1,·'']]],152 ····['stdiohelper_2ecpp_128',·['stdiohelper.cpp',·['../stdiohelper_8cpp.xhtml',·1,·'']]],
153 ····['stdiohelper_2eh_129',·['stdiohelper.h',·['../stdiohelper_8h.xhtml',·1,·'']]],153 ····['stdiohelper_2eh_129',·['stdiohelper.h',·['../stdiohelper_8h.xhtml',·1,·'']]],
154 ····['stophandler_2ecpp_130',·['stophandler.cpp',·['../stophandler_8cpp.xhtml',·1,·'']]],154 ····['stophandler_2ecpp_130',·['stophandler.cpp',·['../stophandler_8cpp.xhtml',·1,·'']]],
155 ····['stophandler_2eh_131',·['stophandler.h',·['../stophandler_8h.xhtml',·1,·'']]],155 ····['stophandler_2eh_131',·['stophandler.h',·['../stophandler_8h.xhtml',·1,·'']]],
156 ····['strconvert_2ecpp_132',·['strconvert.cpp',·['../tests_2strconvert_8cpp.xhtml',·1,·'(Global·Namespace)'],156 ····['strconvert_2ecpp_132',·['strconvert.cpp',·['../strconvert_8cpp.xhtml',·1,·'(Global·Namespace)'],
157 ········['../strconvert_8cpp.xhtml',·1,·'(Global·Namespace)']157 ········['../tests_2strconvert_8cpp.xhtml',·1,·'(Global·Namespace)']
158 ····]],158 ····]],
159 ····['strconvert_2eh_133',·['strconvert.h',·['../strconvert_8h.xhtml',·1,·'']]],159 ····['strconvert_2eh_133',·['strconvert.h',·['../strconvert_8h.xhtml',·1,·'']]],
160 ····['strdb_2eh_134',·['strdb.h',·['../strdb_8h.xhtml',·1,·'']]],160 ····['strdb_2eh_134',·['strdb.h',·['../strdb_8h.xhtml',·1,·'']]],
161 ····['stringcompare_2eh_135',·['stringcompare.h',·['../stringcompare_8h.xhtml',·1,·'']]],161 ····['stringcompare_2eh_135',·['stringcompare.h',·['../stringcompare_8h.xhtml',·1,·'']]],
162 ····['stringstream_2ecpp_136',·['stringstream.cpp',·['../stringstream_8cpp.xhtml',·1,·'']]],162 ····['stringstream_2ecpp_136',·['stringstream.cpp',·['../stringstream_8cpp.xhtml',·1,·'']]],
163 ····['stringstream_2eh_137',·['stringstream.h',·['../stringstream_8h.xhtml',·1,·'']]],163 ····['stringstream_2eh_137',·['stringstream.h',·['../stringstream_8h.xhtml',·1,·'']]],
164 ····['stringtest_2ecpp_138',·['stringtest.cpp',·['../stringtest_8cpp.xhtml',·1,·'']]],164 ····['stringtest_2ecpp_138',·['stringtest.cpp',·['../stringtest_8cpp.xhtml',·1,·'']]],
Offset 174, 14 lines modifiedOffset 174, 14 lines modified
174 ········['../programs_2mdrun_2tests_2swapcoords_8cpp.xhtml',·1,·'(Global·Namespace)']174 ········['../programs_2mdrun_2tests_2swapcoords_8cpp.xhtml',·1,·'(Global·Namespace)']
175 ····]],175 ····]],
176 ····['swapcoords_2eh_146',·['swapcoords.h',·['../swapcoords_8h.xhtml',·1,·'']]],176 ····['swapcoords_2eh_146',·['swapcoords.h',·['../swapcoords_8h.xhtml',·1,·'']]],
177 ····['sycl_5fkernel_5futils_2eh_147',·['sycl_kernel_utils.h',·['../sycl__kernel__utils_8h.xhtml',·1,·'']]],177 ····['sycl_5fkernel_5futils_2eh_147',·['sycl_kernel_utils.h',·['../sycl__kernel__utils_8h.xhtml',·1,·'']]],
178 ····['syclutils_2eh_148',·['syclutils.h',·['../syclutils_8h.xhtml',·1,·'']]],178 ····['syclutils_2eh_148',·['syclutils.h',·['../syclutils_8h.xhtml',·1,·'']]],
179 ····['symrec_2ecpp_149',·['symrec.cpp',·['../symrec_8cpp.xhtml',·1,·'']]],179 ····['symrec_2ecpp_149',·['symrec.cpp',·['../symrec_8cpp.xhtml',·1,·'']]],
180 ····['symrec_2eh_150',·['symrec.h',·['../symrec_8h.xhtml',·1,·'']]],180 ····['symrec_2eh_150',·['symrec.h',·['../symrec_8h.xhtml',·1,·'']]],
181 ····['symtab_2ecpp_151',·['symtab.cpp',·['../tests_2symtab_8cpp.xhtml',·1,·'(Global·Namespace)'],181 ····['symtab_2ecpp_151',·['symtab.cpp',·['../symtab_8cpp.xhtml',·1,·'(Global·Namespace)'],
182 ········['../symtab_8cpp.xhtml',·1,·'(Global·Namespace)']182 ········['../tests_2symtab_8cpp.xhtml',·1,·'(Global·Namespace)']
183 ····]],183 ····]],
184 ····['symtab_2eh_152',·['symtab.h',·['../symtab_8h.xhtml',·1,·'']]],184 ····['symtab_2eh_152',·['symtab.h',·['../symtab_8h.xhtml',·1,·'']]],
185 ····['sysinfo_2ecpp_153',·['sysinfo.cpp',·['../sysinfo_8cpp.xhtml',·1,·'']]],185 ····['sysinfo_2ecpp_153',·['sysinfo.cpp',·['../sysinfo_8cpp.xhtml',·1,·'']]],
186 ····['sysinfo_2eh_154',·['sysinfo.h',·['../sysinfo_8h.xhtml',·1,·'']]]186 ····['sysinfo_2eh_154',·['sysinfo.h',·['../sysinfo_8h.xhtml',·1,·'']]]
187 ];187 ];
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Offset 31, 21 lines modifiedOffset 31, 21 lines modified
31 ····['testmodule_2ecpp_29',·['testmodule.cpp',·['../testmodule_8cpp.xhtml',·1,·'']]],31 ····['testmodule_2ecpp_29',·['testmodule.cpp',·['../testmodule_8cpp.xhtml',·1,·'']]],
32 ····['testmodule_2eh_30',·['testmodule.h',·['../testmodule_8h.xhtml',·1,·'']]],32 ····['testmodule_2eh_30',·['testmodule.h',·['../testmodule_8h.xhtml',·1,·'']]],
33 ····['testoptions_2ecpp_31',·['testoptions.cpp',·['../testoptions_8cpp.xhtml',·1,·'']]],33 ····['testoptions_2ecpp_31',·['testoptions.cpp',·['../testoptions_8cpp.xhtml',·1,·'']]],
34 ····['testoptions_2eh_32',·['testoptions.h',·['../testoptions_8h.xhtml',·1,·'']]],34 ····['testoptions_2eh_32',·['testoptions.h',·['../testoptions_8h.xhtml',·1,·'']]],
35 ····['testutils_5fdoc_2eh_33',·['testutils_doc.h',·['../testutils__doc_8h.xhtml',·1,·'']]],35 ····['testutils_5fdoc_2eh_33',·['testutils_doc.h',·['../testutils__doc_8h.xhtml',·1,·'']]],
36 ····['textblockmatchers_2ecpp_34',·['textblockmatchers.cpp',·['../textblockmatchers_8cpp.xhtml',·1,·'']]],36 ····['textblockmatchers_2ecpp_34',·['textblockmatchers.cpp',·['../textblockmatchers_8cpp.xhtml',·1,·'']]],
37 ····['textblockmatchers_2eh_35',·['textblockmatchers.h',·['../textblockmatchers_8h.xhtml',·1,·'']]],37 ····['textblockmatchers_2eh_35',·['textblockmatchers.h',·['../textblockmatchers_8h.xhtml',·1,·'']]],
38 ····['textreader_2ecpp_36',·['textreader.cpp',·['../tests_2textreader_8cpp.xhtml',·1,·'(Global·Namespace)'],38 ····['textreader_2ecpp_36',·['textreader.cpp',·['../textreader_8cpp.xhtml',·1,·'(Global·Namespace)'],
39 ········['../textreader_8cpp.xhtml',·1,·'(Global·Namespace)']39 ········['../tests_2textreader_8cpp.xhtml',·1,·'(Global·Namespace)']
40 ····]],40 ····]],
41 ····['textreader_2eh_37',·['textreader.h',·['../textreader_8h.xhtml',·1,·'']]],41 ····['textreader_2eh_37',·['textreader.h',·['../textreader_8h.xhtml',·1,·'']]],
42 ····['textstream_2eh_38',·['textstream.h',·['../textstream_8h.xhtml',·1,·'']]],42 ····['textstream_2eh_38',·['textstream.h',·['../textstream_8h.xhtml',·1,·'']]],
43 ····['textwriter_2ecpp_39',·['textwriter.cpp',·['../tests_2textwriter_8cpp.xhtml',·1,·'(Global·Namespace)'],43 ····['textwriter_2ecpp_39',·['textwriter.cpp',·['../textwriter_8cpp.xhtml',·1,·'(Global·Namespace)'],
44 ········['../textwriter_8cpp.xhtml',·1,·'(Global·Namespace)']44 ········['../tests_2textwriter_8cpp.xhtml',·1,·'(Global·Namespace)']
45 ····]],45 ····]],
46 ····['textwriter_2eh_40',·['textwriter.h',·['../textwriter_8h.xhtml',·1,·'']]],46 ····['textwriter_2eh_40',·['textwriter.h',·['../textwriter_8h.xhtml',·1,·'']]],
47 ····['thermochemistry_2eh_41',·['thermochemistry.h',·['../thermochemistry_8h.xhtml',·1,·'']]],47 ····['thermochemistry_2eh_41',·['thermochemistry.h',·['../thermochemistry_8h.xhtml',·1,·'']]],
48 ····['threadaffinity_2eh_42',·['threadaffinity.h',·['../threadaffinity_8h.xhtml',·1,·'']]],48 ····['threadaffinity_2eh_42',·['threadaffinity.h',·['../threadaffinity_8h.xhtml',·1,·'']]],
49 ····['threaded_5fforce_5fbuffer_2ecpp_43',·['threaded_force_buffer.cpp',·['../threaded__force__buffer_8cpp.xhtml',·1,·'']]],49 ····['threaded_5fforce_5fbuffer_2ecpp_43',·['threaded_force_buffer.cpp',·['../threaded__force__buffer_8cpp.xhtml',·1,·'']]],
50 ····['threaded_5fforce_5fbuffer_2eh_44',·['threaded_force_buffer.h',·['../threaded__force__buffer_8h.xhtml',·1,·'']]],50 ····['threaded_5fforce_5fbuffer_2eh_44',·['threaded_force_buffer.h',·['../threaded__force__buffer_8h.xhtml',·1,·'']]],
51 ····['threefry_2ecpp_45',·['threefry.cpp',·['../threefry_8cpp.xhtml',·1,·'']]],51 ····['threefry_2ecpp_45',·['threefry.cpp',·['../threefry_8cpp.xhtml',·1,·'']]],
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20 ········['../usergpuids_8cpp.xhtml',·1,·'(Global·Namespace)']20 ········['../usergpuids_8cpp.xhtml',·1,·'(Global·Namespace)']
21 ····]],21 ····]],
22 ····['usergpuids_2eh_18',·['usergpuids.h',·['../usergpuids_8h.xhtml',·1,·'']]],22 ····['usergpuids_2eh_18',·['usergpuids.h',·['../usergpuids_8h.xhtml',·1,·'']]],
23 ····['utilities_2eh_19',·['utilities.h',·['../src_2gromacs_2mimic_2utilities_8h.xhtml',·1,·'(Global·Namespace)'],23 ····['utilities_2eh_19',·['utilities.h',·['../src_2gromacs_2mimic_2utilities_8h.xhtml',·1,·'(Global·Namespace)'],
24 ········['../src_2gromacs_2listed__forces_2utilities_8h.xhtml',·1,·'(Global·Namespace)']24 ········['../src_2gromacs_2listed__forces_2utilities_8h.xhtml',·1,·'(Global·Namespace)']
25 ····]],25 ····]],
26 ····['utility_2ecpp_20',·['utility.cpp',·['../utility_8cpp.xhtml',·1,·'']]],26 ····['utility_2ecpp_20',·['utility.cpp',·['../utility_8cpp.xhtml',·1,·'']]],
27 ····['utility_2eh_21',·['utility.h',·['../compat_2utility_8h.xhtml',·1,·'(Global·Namespace)'],27 ····['utility_2eh_21',·['utility.h',·['../utility_8h.xhtml',·1,·'(Global·Namespace)'],
28 ········['../domdec_2utility_8h.xhtml',·1,·'(Global·Namespace)'],28 ········['../domdec_2utility_8h.xhtml',·1,·'(Global·Namespace)'],
29 ········['../utility_8h.xhtml',·1,·'(Global·Namespace)']29 ········['../compat_2utility_8h.xhtml',·1,·'(Global·Namespace)']
30 ····]]30 ····]]
31 ];31 ];
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10 ····['checkpointdata_2ecpp_6',·['checkpointdata.cpp',·['../checkpointdata_8cpp.xhtml',·1,·'']]],10 ····['checkpointdata_2ecpp_6',·['checkpointdata.cpp',·['../checkpointdata_8cpp.xhtml',·1,·'']]],
11 ····['checkpointdata_2eh_7',·['checkpointdata.h',·['../checkpointdata_8h.xhtml',·1,·'']]],11 ····['checkpointdata_2eh_7',·['checkpointdata.h',·['../checkpointdata_8h.xhtml',·1,·'']]],
12 ····['checkpointhandler_2ecpp_8',·['checkpointhandler.cpp',·['../checkpointhandler_8cpp.xhtml',·1,·'']]],12 ····['checkpointhandler_2ecpp_8',·['checkpointhandler.cpp',·['../checkpointhandler_8cpp.xhtml',·1,·'']]],
13 ····['checkpointhandler_2eh_9',·['checkpointhandler.h',·['../checkpointhandler_8h.xhtml',·1,·'']]],13 ····['checkpointhandler_2eh_9',·['checkpointhandler.h',·['../checkpointhandler_8h.xhtml',·1,·'']]],
14 ····['checkpointhelper_2ecpp_10',·['checkpointhelper.cpp',·['../checkpointhelper_8cpp.xhtml',·1,·'']]],14 ····['checkpointhelper_2ecpp_10',·['checkpointhelper.cpp',·['../checkpointhelper_8cpp.xhtml',·1,·'']]],
15 ····['checkpointhelper_2eh_11',·['checkpointhelper.h',·['../checkpointhelper_8h.xhtml',·1,·'']]],15 ····['checkpointhelper_2eh_11',·['checkpointhelper.h',·['../checkpointhelper_8h.xhtml',·1,·'']]],
16 ····['classhelpers_2eh_12',·['classhelpers.h',·['../classhelpers_8h.xhtml',·1,·'']]],16 ····['classhelpers_2eh_12',·['classhelpers.h',·['../classhelpers_8h.xhtml',·1,·'']]],
17 ····['clfftinitializer_2ecpp_13',·['clfftinitializer.cpp',·['../tests_2clfftinitializer_8cpp.xhtml',·1,·'(Global·Namespace)'],17 ····['clfftinitializer_2ecpp_13',·['clfftinitializer.cpp',·['../clfftinitializer_8cpp.xhtml',·1,·'(Global·Namespace)'],
18 ········['../clfftinitializer_8cpp.xhtml',·1,·'(Global·Namespace)']18 ········['../tests_2clfftinitializer_8cpp.xhtml',·1,·'(Global·Namespace)']
19 ····]],19 ····]],
20 ····['clfftinitializer_2eh_14',·['clfftinitializer.h',·['../clfftinitializer_8h.xhtml',·1,·'']]],20 ····['clfftinitializer_2eh_14',·['clfftinitializer.h',·['../clfftinitializer_8h.xhtml',·1,·'']]],
21 ····['clusterdistancekerneltype_2eh_15',·['clusterdistancekerneltype.h',·['../clusterdistancekerneltype_8h.xhtml',·1,·'']]],21 ····['clusterdistancekerneltype_2eh_15',·['clusterdistancekerneltype.h',·['../clusterdistancekerneltype_8h.xhtml',·1,·'']]],
22 ····['clustsize_2ecpp_16',·['clustsize.cpp',·['../clustsize_8cpp.xhtml',·1,·'']]],22 ····['clustsize_2ecpp_16',·['clustsize.cpp',·['../clustsize_8cpp.xhtml',·1,·'']]],
23 ····['cmdlinehelpcontext_2ecpp_17',·['cmdlinehelpcontext.cpp',·['../cmdlinehelpcontext_8cpp.xhtml',·1,·'']]],23 ····['cmdlinehelpcontext_2ecpp_17',·['cmdlinehelpcontext.cpp',·['../cmdlinehelpcontext_8cpp.xhtml',·1,·'']]],
24 ····['cmdlinehelpcontext_2eh_18',·['cmdlinehelpcontext.h',·['../cmdlinehelpcontext_8h.xhtml',·1,·'']]],24 ····['cmdlinehelpcontext_2eh_18',·['cmdlinehelpcontext.h',·['../cmdlinehelpcontext_8h.xhtml',·1,·'']]],
25 ····['cmdlinehelpmodule_2ecpp_19',·['cmdlinehelpmodule.cpp',·['../cmdlinehelpmodule_8cpp.xhtml',·1,·'(Global·Namespace)'],25 ····['cmdlinehelpmodule_2ecpp_19',·['cmdlinehelpmodule.cpp',·['../tests_2cmdlinehelpmodule_8cpp.xhtml',·1,·'(Global·Namespace)'],
26 ········['../tests_2cmdlinehelpmodule_8cpp.xhtml',·1,·'(Global·Namespace)']26 ········['../cmdlinehelpmodule_8cpp.xhtml',·1,·'(Global·Namespace)']
27 ····]],27 ····]],
28 ····['cmdlinehelpmodule_2eh_20',·['cmdlinehelpmodule.h',·['../cmdlinehelpmodule_8h.xhtml',·1,·'']]],28 ····['cmdlinehelpmodule_2eh_20',·['cmdlinehelpmodule.h',·['../cmdlinehelpmodule_8h.xhtml',·1,·'']]],
29 ····['cmdlinehelpwriter_2ecpp_21',·['cmdlinehelpwriter.cpp',·['../tests_2cmdlinehelpwriter_8cpp.xhtml',·1,·'(Global·Namespace)'],29 ····['cmdlinehelpwriter_2ecpp_21',·['cmdlinehelpwriter.cpp',·['../tests_2cmdlinehelpwriter_8cpp.xhtml',·1,·'(Global·Namespace)'],
30 ········['../cmdlinehelpwriter_8cpp.xhtml',·1,·'(Global·Namespace)']30 ········['../cmdlinehelpwriter_8cpp.xhtml',·1,·'(Global·Namespace)']
31 ····]],31 ····]],
32 ····['cmdlinehelpwriter_2eh_22',·['cmdlinehelpwriter.h',·['../cmdlinehelpwriter_8h.xhtml',·1,·'']]],32 ····['cmdlinehelpwriter_2eh_22',·['cmdlinehelpwriter.h',·['../cmdlinehelpwriter_8h.xhtml',·1,·'']]],
33 ····['cmdlineinit_2ecpp_23',·['cmdlineinit.cpp',·['../cmdlineinit_8cpp.xhtml',·1,·'']]],33 ····['cmdlineinit_2ecpp_23',·['cmdlineinit.cpp',·['../cmdlineinit_8cpp.xhtml',·1,·'']]],
Offset 106, 26 lines modifiedOffset 106, 26 lines modified
106 ····['constraintelement_2eh_78',·['constraintelement.h',·['../constraintelement_8h.xhtml',·1,·'']]],106 ····['constraintelement_2eh_78',·['constraintelement.h',·['../constraintelement_8h.xhtml',·1,·'']]],
107 ····['constrtestdata_2ecpp_79',·['constrtestdata.cpp',·['../constrtestdata_8cpp.xhtml',·1,·'']]],107 ····['constrtestdata_2ecpp_79',·['constrtestdata.cpp',·['../constrtestdata_8cpp.xhtml',·1,·'']]],
108 ····['constrtestdata_2eh_80',·['constrtestdata.h',·['../constrtestdata_8h.xhtml',·1,·'']]],108 ····['constrtestdata_2eh_80',·['constrtestdata.h',·['../constrtestdata_8h.xhtml',·1,·'']]],
109 ····['constrtestrunners_2ecpp_81',·['constrtestrunners.cpp',·['../constrtestrunners_8cpp.xhtml',·1,·'']]],109 ····['constrtestrunners_2ecpp_81',·['constrtestrunners.cpp',·['../constrtestrunners_8cpp.xhtml',·1,·'']]],
110 ····['constrtestrunners_2eh_82',·['constrtestrunners.h',·['../constrtestrunners_8h.xhtml',·1,·'']]],110 ····['constrtestrunners_2eh_82',·['constrtestrunners.h',·['../constrtestrunners_8h.xhtml',·1,·'']]],
111 ····['constrtestrunners_5fgpu_2ecpp_83',·['constrtestrunners_gpu.cpp',·['../constrtestrunners__gpu_8cpp.xhtml',·1,·'']]],111 ····['constrtestrunners_5fgpu_2ecpp_83',·['constrtestrunners_gpu.cpp',·['../constrtestrunners__gpu_8cpp.xhtml',·1,·'']]],
112 ····['convert_2dtpr_2ecpp_84',·['convert-tpr.cpp',·['../convert-tpr_8cpp.xhtml',·1,·'']]],112 ····['convert_2dtpr_2ecpp_84',·['convert-tpr.cpp',·['../convert-tpr_8cpp.xhtml',·1,·'']]],
113 ····['convert_5ftrj_2ecpp_85',·['convert_trj.cpp',·['../tests_2convert__trj_8cpp.xhtml',·1,·'(Global·Namespace)'],113 ····['convert_5ftrj_2ecpp_85',·['convert_trj.cpp',·['../modules_2convert__trj_8cpp.xhtml',·1,·'(Global·Namespace)'],
114 ········['../modules_2convert__trj_8cpp.xhtml',·1,·'(Global·Namespace)']114 ········['../tests_2convert__trj_8cpp.xhtml',·1,·'(Global·Namespace)']
115 ····]],115 ····]],
116 ····['convert_5ftrj_2eh_86',·['convert_trj.h',·['../convert__trj_8h.xhtml',·1,·'']]],116 ····['convert_5ftrj_2eh_86',·['convert_trj.h',·['../convert__trj_8h.xhtml',·1,·'']]],
117 ····['coolstuff_2ecpp_87',·['coolstuff.cpp',·['../coolstuff_8cpp.xhtml',·1,·'']]],117 ····['coolstuff_2ecpp_87',·['coolstuff.cpp',·['../coolstuff_8cpp.xhtml',·1,·'']]],
118 ····['coolstuff_2eh_88',·['coolstuff.h',·['../coolstuff_8h.xhtml',·1,·'']]],118 ····['coolstuff_2eh_88',·['coolstuff.h',·['../coolstuff_8h.xhtml',·1,·'']]],
119 ····['coordinate_5ftest_2eh_89',·['coordinate_test.h',·['../coordinate__test_8h.xhtml',·1,·'']]],119 ····['coordinate_5ftest_2eh_89',·['coordinate_test.h',·['../coordinate__test_8h.xhtml',·1,·'']]],
120 ····['coordinatefile_2ecpp_90',·['coordinatefile.cpp',·['../coordinatefile_8cpp.xhtml',·1,·'']]],120 ····['coordinatefile_2ecpp_90',·['coordinatefile.cpp',·['../coordinatefile_8cpp.xhtml',·1,·'']]],
121 ····['coordinatefile_2eh_91',·['coordinatefile.h',·['../coordinatefile_8h.xhtml',·1,·'']]],121 ····['coordinatefile_2eh_91',·['coordinatefile.h',·['../coordinatefile_8h.xhtml',·1,·'']]],
122 ····['coordinatefileenums_2eh_92',·['coordinatefileenums.h',·['../coordinatefileenums_8h.xhtml',·1,·'']]],122 ····['coordinatefileenums_2eh_92',·['coordinatefileenums.h',·['../coordinatefileenums_8h.xhtml',·1,·'']]],
123 ····['coordinatetransformation_2ecpp_93',·['coordinatetransformation.cpp',·['../tests_2coordinatetransformation_8cpp.xhtml',·1,·'(Global·Namespace)'],123 ····['coordinatetransformation_2ecpp_93',·['coordinatetransformation.cpp',·['../coordinatetransformation_8cpp.xhtml',·1,·'(Global·Namespace)'],
124 ········['../coordinatetransformation_8cpp.xhtml',·1,·'(Global·Namespace)']124 ········['../tests_2coordinatetransformation_8cpp.xhtml',·1,·'(Global·Namespace)']
125 ····]],125 ····]],
126 ····['coordinatetransformation_2eh_94',·['coordinatetransformation.h',·['../coordinatetransformation_8h.xhtml',·1,·'']]],126 ····['coordinatetransformation_2eh_94',·['coordinatetransformation.h',·['../coordinatetransformation_8h.xhtml',·1,·'']]],
127 ····['coordstate_2ecpp_95',·['coordstate.cpp',·['../coordstate_8cpp.xhtml',·1,·'']]],127 ····['coordstate_2ecpp_95',·['coordstate.cpp',·['../coordstate_8cpp.xhtml',·1,·'']]],
128 ····['coordstate_2eh_96',·['coordstate.h',·['../coordstate_8h.xhtml',·1,·'']]],128 ····['coordstate_2eh_96',·['coordstate.h',·['../coordstate_8h.xhtml',·1,·'']]],
129 ····['correlationdataset_2ecpp_97',·['correlationdataset.cpp',·['../correlationdataset_8cpp.xhtml',·1,·'']]],129 ····['correlationdataset_2ecpp_97',·['correlationdataset.cpp',·['../correlationdataset_8cpp.xhtml',·1,·'']]],
130 ····['correlationdataset_2eh_98',·['correlationdataset.h',·['../correlationdataset_8h.xhtml',·1,·'']]],130 ····['correlationdataset_2eh_98',·['correlationdataset.h',·['../correlationdataset_8h.xhtml',·1,·'']]],
131 ····['correlationgrid_2ecpp_99',·['correlationgrid.cpp',·['../correlationgrid_8cpp.xhtml',·1,·'']]],131 ····['correlationgrid_2ecpp_99',·['correlationgrid.cpp',·['../correlationgrid_8cpp.xhtml',·1,·'']]],
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36 ····]],36 ····]],
37 ····['densityfittingforce_2eh_27',·['densityfittingforce.h',·['../densityfittingforce_8h.xhtml',·1,·'']]],37 ····['densityfittingforce_2eh_27',·['densityfittingforce.h',·['../densityfittingforce_8h.xhtml',·1,·'']]],
38 ····['densityfittingforceprovider_2ecpp_28',·['densityfittingforceprovider.cpp',·['../tests_2densityfittingforceprovider_8cpp.xhtml',·1,·'(Global·Namespace)'],38 ····['densityfittingforceprovider_2ecpp_28',·['densityfittingforceprovider.cpp',·['../tests_2densityfittingforceprovider_8cpp.xhtml',·1,·'(Global·Namespace)'],
39 ········['../densityfittingforceprovider_8cpp.xhtml',·1,·'(Global·Namespace)']39 ········['../densityfittingforceprovider_8cpp.xhtml',·1,·'(Global·Namespace)']
40 ····]],40 ····]],
41 ····['densityfittingforceprovider_2eh_29',·['densityfittingforceprovider.h',·['../densityfittingforceprovider_8h.xhtml',·1,·'']]],41 ····['densityfittingforceprovider_2eh_29',·['densityfittingforceprovider.h',·['../densityfittingforceprovider_8h.xhtml',·1,·'']]],
42 ····['densityfittingmodule_2ecpp_30',·['densityfittingmodule.cpp',·['../densityfittingmodule_8cpp.xhtml',·1,·'']]],42 ····['densityfittingmodule_2ecpp_30',·['densityfittingmodule.cpp',·['../densityfittingmodule_8cpp.xhtml',·1,·'']]],
43 ····['densityfittingoptions_2ecpp_31',·['densityfittingoptions.cpp',·['../tests_2densityfittingoptions_8cpp.xhtml',·1,·'(Global·Namespace)'],43 ····['densityfittingoptions_2ecpp_31',·['densityfittingoptions.cpp',·['../densityfittingoptions_8cpp.xhtml',·1,·'(Global·Namespace)'],
44 ········['../densityfittingoptions_8cpp.xhtml',·1,·'(Global·Namespace)']44 ········['../tests_2densityfittingoptions_8cpp.xhtml',·1,·'(Global·Namespace)']
45 ····]],45 ····]],
46 ····['densityfittingoptions_2eh_32',·['densityfittingoptions.h',·['../densityfittingoptions_8h.xhtml',·1,·'']]],46 ····['densityfittingoptions_2eh_32',·['densityfittingoptions.h',·['../densityfittingoptions_8h.xhtml',·1,·'']]],
47 ····['densityfittingoutputprovider_2ecpp_33',·['densityfittingoutputprovider.cpp',·['../densityfittingoutputprovider_8cpp.xhtml',·1,·'']]],47 ····['densityfittingoutputprovider_2ecpp_33',·['densityfittingoutputprovider.cpp',·['../densityfittingoutputprovider_8cpp.xhtml',·1,·'']]],
48 ····['densityfittingoutputprovider_2eh_34',·['densityfittingoutputprovider.h',·['../densityfittingoutputprovider_8h.xhtml',·1,·'']]],48 ····['densityfittingoutputprovider_2eh_34',·['densityfittingoutputprovider.h',·['../densityfittingoutputprovider_8h.xhtml',·1,·'']]],
49 ····['densityfittingparameters_2eh_35',·['densityfittingparameters.h',·['../densityfittingparameters_8h.xhtml',·1,·'']]],49 ····['densityfittingparameters_2eh_35',·['densityfittingparameters.h',·['../densityfittingparameters_8h.xhtml',·1,·'']]],
50 ····['device_5favailability_2ecpp_36',·['device_availability.cpp',·['../device__availability_8cpp.xhtml',·1,·'']]],50 ····['device_5favailability_2ecpp_36',·['device_availability.cpp',·['../device__availability_8cpp.xhtml',·1,·'']]],
51 ····['device_5fbuffer_2ecpp_37',·['device_buffer.cpp',·['../device__buffer_8cpp.xhtml',·1,·'']]],51 ····['device_5fbuffer_2ecpp_37',·['device_buffer.cpp',·['../device__buffer_8cpp.xhtml',·1,·'']]],
Offset 53, 16 lines modifiedOffset 53, 16 lines modified
53 ····['device_5fcontext_2eh_39',·['device_context.h',·['../device__context_8h.xhtml',·1,·'']]],53 ····['device_5fcontext_2eh_39',·['device_context.h',·['../device__context_8h.xhtml',·1,·'']]],
54 ····['device_5fcontext_5focl_2ecpp_40',·['device_context_ocl.cpp',·['../device__context__ocl_8cpp.xhtml',·1,·'']]],54 ····['device_5fcontext_5focl_2ecpp_40',·['device_context_ocl.cpp',·['../device__context__ocl_8cpp.xhtml',·1,·'']]],
55 ····['device_5fcontext_5fsycl_2ecpp_41',·['device_context_sycl.cpp',·['../device__context__sycl_8cpp.xhtml',·1,·'']]],55 ····['device_5fcontext_5fsycl_2ecpp_41',·['device_context_sycl.cpp',·['../device__context__sycl_8cpp.xhtml',·1,·'']]],
56 ····['device_5fevent_2eh_42',·['device_event.h',·['../device__event_8h.xhtml',·1,·'']]],56 ····['device_5fevent_2eh_42',·['device_event.h',·['../device__event_8h.xhtml',·1,·'']]],
57 ····['device_5fevent_5focl_2eh_43',·['device_event_ocl.h',·['../device__event__ocl_8h.xhtml',·1,·'']]],57 ····['device_5fevent_5focl_2eh_43',·['device_event_ocl.h',·['../device__event__ocl_8h.xhtml',·1,·'']]],
58 ····['device_5fevent_5fsycl_2eh_44',·['device_event_sycl.h',·['../device__event__sycl_8h.xhtml',·1,·'']]],58 ····['device_5fevent_5fsycl_2eh_44',·['device_event_sycl.h',·['../device__event__sycl_8h.xhtml',·1,·'']]],
59 ····['device_5finformation_2eh_45',·['device_information.h',·['../device__information_8h.xhtml',·1,·'']]],59 ····['device_5finformation_2eh_45',·['device_information.h',·['../device__information_8h.xhtml',·1,·'']]],
60 ····['device_5fmanagement_2ecpp_46',·['device_management.cpp',·['../device__management_8cpp.xhtml',·1,·'(Global·Namespace)'],60 ····['device_5fmanagement_2ecpp_46',·['device_management.cpp',·['../tests_2device__management_8cpp.xhtml',·1,·'(Global·Namespace)'],
61 ········['../tests_2device__management_8cpp.xhtml',·1,·'(Global·Namespace)']61 ········['../device__management_8cpp.xhtml',·1,·'(Global·Namespace)']
62 ····]],62 ····]],
63 ····['device_5fmanagement_2eh_47',·['device_management.h',·['../device__management_8h.xhtml',·1,·'']]],63 ····['device_5fmanagement_2eh_47',·['device_management.h',·['../device__management_8h.xhtml',·1,·'']]],
64 ····['device_5fmanagement_5fcommon_2ecpp_48',·['device_management_common.cpp',·['../device__management__common_8cpp.xhtml',·1,·'']]],64 ····['device_5fmanagement_5fcommon_2ecpp_48',·['device_management_common.cpp',·['../device__management__common_8cpp.xhtml',·1,·'']]],
65 ····['device_5fmanagement_5focl_2ecpp_49',·['device_management_ocl.cpp',·['../device__management__ocl_8cpp.xhtml',·1,·'']]],65 ····['device_5fmanagement_5focl_2ecpp_49',·['device_management_ocl.cpp',·['../device__management__ocl_8cpp.xhtml',·1,·'']]],
66 ····['device_5fmanagement_5fsycl_2ecpp_50',·['device_management_sycl.cpp',·['../device__management__sycl_8cpp.xhtml',·1,·'']]],66 ····['device_5fmanagement_5fsycl_2ecpp_50',·['device_management_sycl.cpp',·['../device__management__sycl_8cpp.xhtml',·1,·'']]],
67 ····['device_5fmanagement_5fsycl_5fintel_5fdevice_5fids_2ecpp_51',·['device_management_sycl_intel_device_ids.cpp',·['../device__management__sycl__intel__device__ids_8cpp.xhtml',·1,·'']]],67 ····['device_5fmanagement_5fsycl_5fintel_5fdevice_5fids_2ecpp_51',·['device_management_sycl_intel_device_ids.cpp',·['../device__management__sycl__intel__device__ids_8cpp.xhtml',·1,·'']]],
68 ····['device_5fmanagement_5fsycl_5fintel_5fdevice_5fids_2eh_52',·['device_management_sycl_intel_device_ids.h',·['../device__management__sycl__intel__device__ids_8h.xhtml',·1,·'']]],68 ····['device_5fmanagement_5fsycl_5fintel_5fdevice_5fids_2eh_52',·['device_management_sycl_intel_device_ids.h',·['../device__management__sycl__intel__device__ids_8h.xhtml',·1,·'']]],
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7 ····['electricfield_2eh_3',·['electricfield.h',·['../electricfield_8h.xhtml',·1,·'']]],7 ····['electricfield_2eh_3',·['electricfield.h',·['../electricfield_8h.xhtml',·1,·'']]],
8 ····['enerdata_2ecpp_4',·['enerdata.cpp',·['../enerdata_8cpp.xhtml',·1,·'']]],8 ····['enerdata_2ecpp_4',·['enerdata.cpp',·['../enerdata_8cpp.xhtml',·1,·'']]],
9 ····['energyanalysisframe_2eh_5',·['energyanalysisframe.h',·['../energyanalysisframe_8h.xhtml',·1,·'']]],9 ····['energyanalysisframe_2eh_5',·['energyanalysisframe.h',·['../energyanalysisframe_8h.xhtml',·1,·'']]],
10 ····['energycomparison_2ecpp_6',·['energycomparison.cpp',·['../energycomparison_8cpp.xhtml',·1,·'']]],10 ····['energycomparison_2ecpp_6',·['energycomparison.cpp',·['../energycomparison_8cpp.xhtml',·1,·'']]],
11 ····['energycomparison_2eh_7',·['energycomparison.h',·['../energycomparison_8h.xhtml',·1,·'']]],11 ····['energycomparison_2eh_7',·['energycomparison.h',·['../energycomparison_8h.xhtml',·1,·'']]],
12 ····['energydata_2ecpp_8',·['energydata.cpp',·['../energydata_8cpp.xhtml',·1,·'']]],12 ····['energydata_2ecpp_8',·['energydata.cpp',·['../energydata_8cpp.xhtml',·1,·'']]],
13 ····['energydata_2eh_9',·['energydata.h',·['../energydata_8h.xhtml',·1,·'']]],13 ····['energydata_2eh_9',·['energydata.h',·['../energydata_8h.xhtml',·1,·'']]],
14 ····['energydrifttracker_2ecpp_10',·['energydrifttracker.cpp',·['../tests_2energydrifttracker_8cpp.xhtml',·1,·'(Global·Namespace)'],14 ····['energydrifttracker_2ecpp_10',·['energydrifttracker.cpp',·['../energydrifttracker_8cpp.xhtml',·1,·'(Global·Namespace)'],
15 ········['../energydrifttracker_8cpp.xhtml',·1,·'(Global·Namespace)']15 ········['../tests_2energydrifttracker_8cpp.xhtml',·1,·'(Global·Namespace)']
16 ····]],16 ····]],
17 ····['energydrifttracker_2eh_11',·['energydrifttracker.h',·['../energydrifttracker_8h.xhtml',·1,·'']]],17 ····['energydrifttracker_2eh_11',·['energydrifttracker.h',·['../energydrifttracker_8h.xhtml',·1,·'']]],
18 ····['energyframe_2ecpp_12',·['energyframe.cpp',·['../energyframe_8cpp.xhtml',·1,·'']]],18 ····['energyframe_2ecpp_12',·['energyframe.cpp',·['../energyframe_8cpp.xhtml',·1,·'']]],
19 ····['energyhistory_2eh_13',·['energyhistory.h',·['../energyhistory_8h.xhtml',·1,·'']]],19 ····['energyhistory_2eh_13',·['energyhistory.h',·['../energyhistory_8h.xhtml',·1,·'']]],
20 ····['energyoutput_2ecpp_14',·['energyoutput.cpp',·['../energyoutput_8cpp.xhtml',·1,·'(Global·Namespace)'],20 ····['energyoutput_2ecpp_14',·['energyoutput.cpp',·['../tests_2energyoutput_8cpp.xhtml',·1,·'(Global·Namespace)'],
21 ········['../tests_2energyoutput_8cpp.xhtml',·1,·'(Global·Namespace)']21 ········['../energyoutput_8cpp.xhtml',·1,·'(Global·Namespace)']
22 ····]],22 ····]],
23 ····['energyoutput_2eh_15',·['energyoutput.h',·['../energyoutput_8h.xhtml',·1,·'']]],23 ····['energyoutput_2eh_15',·['energyoutput.h',·['../energyoutput_8h.xhtml',·1,·'']]],
24 ····['energyreader_2ecpp_16',·['energyreader.cpp',·['../energyreader_8cpp.xhtml',·1,·'']]],24 ····['energyreader_2ecpp_16',·['energyreader.cpp',·['../energyreader_8cpp.xhtml',·1,·'']]],
25 ····['energyreader_2eh_17',·['energyreader.h',·['../energyreader_8h.xhtml',·1,·'']]],25 ····['energyreader_2eh_17',·['energyreader.h',·['../energyreader_8h.xhtml',·1,·'']]],
26 ····['energyterm_2ecpp_18',·['energyterm.cpp',·['../tests_2energyterm_8cpp.xhtml',·1,·'(Global·Namespace)'],26 ····['energyterm_2ecpp_18',·['energyterm.cpp',·['../tests_2energyterm_8cpp.xhtml',·1,·'(Global·Namespace)'],
27 ········['../energyterm_8cpp.xhtml',·1,·'(Global·Namespace)']27 ········['../energyterm_8cpp.xhtml',·1,·'(Global·Namespace)']
28 ····]],28 ····]],
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27 ····['findallgputasks_2ecpp_21',·['findallgputasks.cpp',·['../findallgputasks_8cpp.xhtml',·1,·'']]],27 ····['findallgputasks_2ecpp_21',·['findallgputasks.cpp',·['../findallgputasks_8cpp.xhtml',·1,·'']]],
28 ····['findallgputasks_2eh_22',·['findallgputasks.h',·['../findallgputasks_8h.xhtml',·1,·'']]],28 ····['findallgputasks_2eh_22',·['findallgputasks.h',·['../findallgputasks_8h.xhtml',·1,·'']]],
29 ····['firstorderpressurecoupling_2ecpp_23',·['firstorderpressurecoupling.cpp',·['../firstorderpressurecoupling_8cpp.xhtml',·1,·'']]],29 ····['firstorderpressurecoupling_2ecpp_23',·['firstorderpressurecoupling.cpp',·['../firstorderpressurecoupling_8cpp.xhtml',·1,·'']]],
30 ····['firstorderpressurecoupling_2eh_24',·['firstorderpressurecoupling.h',·['../firstorderpressurecoupling_8h.xhtml',·1,·'']]],30 ····['firstorderpressurecoupling_2eh_24',·['firstorderpressurecoupling.h',·['../firstorderpressurecoupling_8h.xhtml',·1,·'']]],
31 ····['fixedcapacityvector_2ecpp_25',·['fixedcapacityvector.cpp',·['../fixedcapacityvector_8cpp.xhtml',·1,·'']]],31 ····['fixedcapacityvector_2ecpp_25',·['fixedcapacityvector.cpp',·['../fixedcapacityvector_8cpp.xhtml',·1,·'']]],
32 ····['fixedcapacityvector_2eh_26',·['fixedcapacityvector.h',·['../fixedcapacityvector_8h.xhtml',·1,·'']]],32 ····['fixedcapacityvector_2eh_26',·['fixedcapacityvector.h',·['../fixedcapacityvector_8h.xhtml',·1,·'']]],
33 ····['flags_2eh_27',·['flags.h',·['../flags_8h.xhtml',·1,·'']]],33 ····['flags_2eh_27',·['flags.h',·['../flags_8h.xhtml',·1,·'']]],
34 ····['forcebuffers_2ecpp_28',·['forcebuffers.cpp',·['../forcebuffers_8cpp.xhtml',·1,·'(Global·Namespace)'],34 ····['forcebuffers_2ecpp_28',·['forcebuffers.cpp',·['../tests_2forcebuffers_8cpp.xhtml',·1,·'(Global·Namespace)'],
35 ········['../tests_2forcebuffers_8cpp.xhtml',·1,·'(Global·Namespace)']35 ········['../forcebuffers_8cpp.xhtml',·1,·'(Global·Namespace)']
36 ····]],36 ····]],
37 ····['forcebuffers_2eh_29',·['forcebuffers.h',·['../forcebuffers_8h.xhtml',·1,·'']]],37 ····['forcebuffers_2eh_29',·['forcebuffers.h',·['../forcebuffers_8h.xhtml',·1,·'']]],
38 ····['forceelement_2ecpp_30',·['forceelement.cpp',·['../forceelement_8cpp.xhtml',·1,·'']]],38 ····['forceelement_2ecpp_30',·['forceelement.cpp',·['../forceelement_8cpp.xhtml',·1,·'']]],
39 ····['forceelement_2eh_31',·['forceelement.h',·['../forceelement_8h.xhtml',·1,·'']]],39 ····['forceelement_2eh_31',·['forceelement.h',·['../forceelement_8h.xhtml',·1,·'']]],
40 ····['forceoutput_2eh_32',·['forceoutput.h',·['../forceoutput_8h.xhtml',·1,·'']]],40 ····['forceoutput_2eh_32',·['forceoutput.h',·['../forceoutput_8h.xhtml',·1,·'']]],
41 ····['forcetable_2eh_33',·['forcetable.h',·['../forcetable_8h.xhtml',·1,·'']]],41 ····['forcetable_2eh_33',·['forcetable.h',·['../forcetable_8h.xhtml',·1,·'']]],
42 ····['frameaverager_2ecpp_34',·['frameaverager.cpp',·['../frameaverager_8cpp.xhtml',·1,·'']]],42 ····['frameaverager_2ecpp_34',·['frameaverager.cpp',·['../frameaverager_8cpp.xhtml',·1,·'']]],
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71 ········['../tests_2mrcdensitymap_8cpp.xhtml',·1,·'(Global·Namespace)']71 ········['../tests_2mrcdensitymap_8cpp.xhtml',·1,·'(Global·Namespace)']
72 ····]],72 ····]],
73 ····['mrcdensitymap_2eh_53',·['mrcdensitymap.h',·['../mrcdensitymap_8h.xhtml',·1,·'']]],73 ····['mrcdensitymap_2eh_53',·['mrcdensitymap.h',·['../mrcdensitymap_8h.xhtml',·1,·'']]],
74 ····['mrcdensitymapheader_2ecpp_54',·['mrcdensitymapheader.cpp',·['../mrcdensitymapheader_8cpp.xhtml',·1,·'(Global·Namespace)'],74 ····['mrcdensitymapheader_2ecpp_54',·['mrcdensitymapheader.cpp',·['../mrcdensitymapheader_8cpp.xhtml',·1,·'(Global·Namespace)'],
75 ········['../tests_2mrcdensitymapheader_8cpp.xhtml',·1,·'(Global·Namespace)']75 ········['../tests_2mrcdensitymapheader_8cpp.xhtml',·1,·'(Global·Namespace)']
76 ····]],76 ····]],
77 ····['mrcdensitymapheader_2eh_55',·['mrcdensitymapheader.h',·['../mrcdensitymapheader_8h.xhtml',·1,·'']]],77 ····['mrcdensitymapheader_2eh_55',·['mrcdensitymapheader.h',·['../mrcdensitymapheader_8h.xhtml',·1,·'']]],
78 ····['mrcserializer_2ecpp_56',·['mrcserializer.cpp',·['../tests_2mrcserializer_8cpp.xhtml',·1,·'(Global·Namespace)'],78 ····['mrcserializer_2ecpp_56',·['mrcserializer.cpp',·['../mrcserializer_8cpp.xhtml',·1,·'(Global·Namespace)'],
79 ········['../mrcserializer_8cpp.xhtml',·1,·'(Global·Namespace)']79 ········['../tests_2mrcserializer_8cpp.xhtml',·1,·'(Global·Namespace)']
80 ····]],80 ····]],
81 ····['mrcserializer_2eh_57',·['mrcserializer.h',·['../mrcserializer_8h.xhtml',·1,·'']]],81 ····['mrcserializer_2eh_57',·['mrcserializer.h',·['../mrcserializer_8h.xhtml',·1,·'']]],
82 ····['msd_2ecpp_58',·['msd.cpp',·['../modules_2msd_8cpp.xhtml',·1,·'(Global·Namespace)'],82 ····['msd_2ecpp_58',·['msd.cpp',·['../tests_2msd_8cpp.xhtml',·1,·'(Global·Namespace)'],
83 ········['../tests_2msd_8cpp.xhtml',·1,·'(Global·Namespace)']83 ········['../modules_2msd_8cpp.xhtml',·1,·'(Global·Namespace)']
84 ····]],84 ····]],
85 ····['msd_2eh_59',·['msd.h',·['../msd_8h.xhtml',·1,·'']]],85 ····['msd_2eh_59',·['msd.h',·['../msd_8h.xhtml',·1,·'']]],
86 ····['mshift_2ecpp_60',·['mshift.cpp',·['../tests_2mshift_8cpp.xhtml',·1,·'']]],86 ····['mshift_2ecpp_60',·['mshift.cpp',·['../tests_2mshift_8cpp.xhtml',·1,·'']]],
87 ····['mtop_2ecpp_61',·['mtop.cpp',·['../mtop_8cpp.xhtml',·1,·'']]],87 ····['mtop_2ecpp_61',·['mtop.cpp',·['../mtop_8cpp.xhtml',·1,·'']]],
88 ····['mtop_5fatomloops_2eh_62',·['mtop_atomloops.h',·['../mtop__atomloops_8h.xhtml',·1,·'']]],88 ····['mtop_5fatomloops_2eh_62',·['mtop_atomloops.h',·['../mtop__atomloops_8h.xhtml',·1,·'']]],
89 ····['mtop_5flookup_2eh_63',·['mtop_lookup.h',·['../mtop__lookup_8h.xhtml',·1,·'']]],89 ····['mtop_5flookup_2eh_63',·['mtop_lookup.h',·['../mtop__lookup_8h.xhtml',·1,·'']]],
90 ····['mttk_2ecpp_64',·['mttk.cpp',·['../mttk_8cpp.xhtml',·1,·'']]],90 ····['mttk_2ecpp_64',·['mttk.cpp',·['../mttk_8cpp.xhtml',·1,·'']]],
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Offset 12, 16 lines modifiedOffset 12, 16 lines modified
12 ····['pairlistparams_2ecpp_8',·['pairlistparams.cpp',·['../pairlistparams_8cpp.xhtml',·1,·'']]],12 ····['pairlistparams_2ecpp_8',·['pairlistparams.cpp',·['../pairlistparams_8cpp.xhtml',·1,·'']]],
13 ····['pairlistparams_2eh_9',·['pairlistparams.h',·['../pairlistparams_8h.xhtml',·1,·'']]],13 ····['pairlistparams_2eh_9',·['pairlistparams.h',·['../pairlistparams_8h.xhtml',·1,·'']]],
14 ····['pairlistset_2ecpp_10',·['pairlistset.cpp',·['../pairlistset_8cpp.xhtml',·1,·'']]],14 ····['pairlistset_2ecpp_10',·['pairlistset.cpp',·['../pairlistset_8cpp.xhtml',·1,·'']]],
15 ····['pairlistset_2eh_11',·['pairlistset.h',·['../pairlistset_8h.xhtml',·1,·'']]],15 ····['pairlistset_2eh_11',·['pairlistset.h',·['../pairlistset_8h.xhtml',·1,·'']]],
16 ····['pairlistsets_2eh_12',·['pairlistsets.h',·['../pairlistsets_8h.xhtml',·1,·'']]],16 ····['pairlistsets_2eh_12',·['pairlistsets.h',·['../pairlistsets_8h.xhtml',·1,·'']]],
17 ····['pairlistwork_2ecpp_13',·['pairlistwork.cpp',·['../pairlistwork_8cpp.xhtml',·1,·'']]],17 ····['pairlistwork_2ecpp_13',·['pairlistwork.cpp',·['../pairlistwork_8cpp.xhtml',·1,·'']]],
18 ····['pairlistwork_2eh_14',·['pairlistwork.h',·['../pairlistwork_8h.xhtml',·1,·'']]],18 ····['pairlistwork_2eh_14',·['pairlistwork.h',·['../pairlistwork_8h.xhtml',·1,·'']]],
19 ····['pairs_2ecpp_15',·['pairs.cpp',·['../pairs_8cpp.xhtml',·1,·'(Global·Namespace)'],19 ····['pairs_2ecpp_15',·['pairs.cpp',·['../tests_2pairs_8cpp.xhtml',·1,·'(Global·Namespace)'],
20 ········['../tests_2pairs_8cpp.xhtml',·1,·'(Global·Namespace)']20 ········['../pairs_8cpp.xhtml',·1,·'(Global·Namespace)']
21 ····]],21 ····]],
22 ····['pairs_2eh_16',·['pairs.h',·['../pairs_8h.xhtml',·1,·'']]],22 ····['pairs_2eh_16',·['pairs.h',·['../pairs_8h.xhtml',·1,·'']]],
23 ····['pairsearch_2ecpp_17',·['pairsearch.cpp',·['../pairsearch_8cpp.xhtml',·1,·'']]],23 ····['pairsearch_2ecpp_17',·['pairsearch.cpp',·['../pairsearch_8cpp.xhtml',·1,·'']]],
24 ····['pairsearch_2eh_18',·['pairsearch.h',·['../pairsearch_8h.xhtml',·1,·'']]],24 ····['pairsearch_2eh_18',·['pairsearch.h',·['../pairsearch_8h.xhtml',·1,·'']]],
25 ····['paralleloptions_2eh_19',·['paralleloptions.h',·['../paralleloptions_8h.xhtml',·1,·'']]],25 ····['paralleloptions_2eh_19',·['paralleloptions.h',·['../paralleloptions_8h.xhtml',·1,·'']]],
26 ····['params_2ecpp_20',·['params.cpp',·['../params_8cpp.xhtml',·1,·'']]],26 ····['params_2ecpp_20',·['params.cpp',·['../params_8cpp.xhtml',·1,·'']]],
27 ····['pargs_2ecpp_21',·['pargs.cpp',·['../tests_2pargs_8cpp.xhtml',·1,·'']]],27 ····['pargs_2ecpp_21',·['pargs.cpp',·['../tests_2pargs_8cpp.xhtml',·1,·'']]],
Offset 40, 16 lines modifiedOffset 40, 16 lines modified
40 ····['pbc_2ecpp_32',·['pbc.cpp',·['../tests_2pbc_8cpp.xhtml',·1,·'(Global·Namespace)'],40 ····['pbc_2ecpp_32',·['pbc.cpp',·['../tests_2pbc_8cpp.xhtml',·1,·'(Global·Namespace)'],
41 ········['../pbc_8cpp.xhtml',·1,·'(Global·Namespace)']41 ········['../pbc_8cpp.xhtml',·1,·'(Global·Namespace)']
42 ····]],42 ····]],
43 ····['pbc_5faiuc_2eh_33',·['pbc_aiuc.h',·['../pbc__aiuc_8h.xhtml',·1,·'']]],43 ····['pbc_5faiuc_2eh_33',·['pbc_aiuc.h',·['../pbc__aiuc_8h.xhtml',·1,·'']]],
44 ····['pbc_5faiuc_5fsycl_2eh_34',·['pbc_aiuc_sycl.h',·['../pbc__aiuc__sycl_8h.xhtml',·1,·'']]],44 ····['pbc_5faiuc_5fsycl_2eh_34',·['pbc_aiuc_sycl.h',·['../pbc__aiuc__sycl_8h.xhtml',·1,·'']]],
45 ····['pbc_5fsimd_2ecpp_35',·['pbc_simd.cpp',·['../pbc__simd_8cpp.xhtml',·1,·'']]],45 ····['pbc_5fsimd_2ecpp_35',·['pbc_simd.cpp',·['../pbc__simd_8cpp.xhtml',·1,·'']]],
46 ····['pbc_5fsimd_2eh_36',·['pbc_simd.h',·['../pbc__simd_8h.xhtml',·1,·'']]],46 ····['pbc_5fsimd_2eh_36',·['pbc_simd.h',·['../pbc__simd_8h.xhtml',·1,·'']]],
47 ····['pbcenums_2ecpp_37',·['pbcenums.cpp',·['../tests_2pbcenums_8cpp.xhtml',·1,·'(Global·Namespace)'],47 ····['pbcenums_2ecpp_37',·['pbcenums.cpp',·['../pbcenums_8cpp.xhtml',·1,·'(Global·Namespace)'],
48 ········['../pbcenums_8cpp.xhtml',·1,·'(Global·Namespace)']48 ········['../tests_2pbcenums_8cpp.xhtml',·1,·'(Global·Namespace)']
49 ····]],49 ····]],
50 ····['pbcenums_2eh_38',·['pbcenums.h',·['../pbcenums_8h.xhtml',·1,·'']]],50 ····['pbcenums_2eh_38',·['pbcenums.h',·['../pbcenums_8h.xhtml',·1,·'']]],
51 ····['pdb2gmx_2ecpp_39',·['pdb2gmx.cpp',·['../tests_2pdb2gmx_8cpp.xhtml',·1,·'']]],51 ····['pdb2gmx_2ecpp_39',·['pdb2gmx.cpp',·['../tests_2pdb2gmx_8cpp.xhtml',·1,·'']]],
52 ····['periodicactions_2ecpp_40',·['periodicactions.cpp',·['../periodicactions_8cpp.xhtml',·1,·'']]],52 ····['periodicactions_2ecpp_40',·['periodicactions.cpp',·['../periodicactions_8cpp.xhtml',·1,·'']]],
53 ····['periodicactions_2eh_41',·['periodicactions.h',·['../periodicactions_8h.xhtml',·1,·'']]],53 ····['periodicactions_2eh_41',·['periodicactions.h',·['../periodicactions_8h.xhtml',·1,·'']]],
54 ····['periodicactions_5fbasic_2ecpp_42',·['periodicactions_basic.cpp',·['../periodicactions__basic_8cpp.xhtml',·1,·'']]],54 ····['periodicactions_5fbasic_2ecpp_42',·['periodicactions_basic.cpp',·['../periodicactions__basic_8cpp.xhtml',·1,·'']]],
55 ····['periodicactions_5fconstraints_2ecpp_43',·['periodicactions_constraints.cpp',·['../periodicactions__constraints_8cpp.xhtml',·1,·'']]],55 ····['periodicactions_5fconstraints_2ecpp_43',·['periodicactions_constraints.cpp',·['../periodicactions__constraints_8cpp.xhtml',·1,·'']]],
Offset 130, 16 lines modifiedOffset 130, 16 lines modified
130 ····['pmetestcommon_2eh_116',·['pmetestcommon.h',·['../pmetestcommon_8h.xhtml',·1,·'']]],130 ····['pmetestcommon_2eh_116',·['pmetestcommon.h',·['../pmetestcommon_8h.xhtml',·1,·'']]],
131 ····['pointers_2ecpp_117',·['pointers.cpp',·['../pointers_8cpp.xhtml',·1,·'']]],131 ····['pointers_2ecpp_117',·['pointers.cpp',·['../pointers_8cpp.xhtml',·1,·'']]],
132 ····['pointers_2eh_118',·['pointers.h',·['../pointers_8h.xhtml',·1,·'']]],132 ····['pointers_2eh_118',·['pointers.h',·['../pointers_8h.xhtml',·1,·'']]],
133 ····['pointstate_2ecpp_119',·['pointstate.cpp',·['../pointstate_8cpp.xhtml',·1,·'']]],133 ····['pointstate_2ecpp_119',·['pointstate.cpp',·['../pointstate_8cpp.xhtml',·1,·'']]],
134 ····['pointstate_2eh_120',·['pointstate.h',·['../pointstate_8h.xhtml',·1,·'']]],134 ····['pointstate_2eh_120',·['pointstate.h',·['../pointstate_8h.xhtml',·1,·'']]],
135 ····['polynomials_2ecpp_121',·['polynomials.cpp',·['../polynomials_8cpp.xhtml',·1,·'']]],135 ····['polynomials_2ecpp_121',·['polynomials.cpp',·['../polynomials_8cpp.xhtml',·1,·'']]],
136 ····['polynomials_2eh_122',·['polynomials.h',·['../polynomials_8h.xhtml',·1,·'']]],136 ····['polynomials_2eh_122',·['polynomials.h',·['../polynomials_8h.xhtml',·1,·'']]],
137 ····['poscalc_2ecpp_123',·['poscalc.cpp',·['../tests_2poscalc_8cpp.xhtml',·1,·'(Global·Namespace)'],137 ····['poscalc_2ecpp_123',·['poscalc.cpp',·['../poscalc_8cpp.xhtml',·1,·'(Global·Namespace)'],
138 ········['../poscalc_8cpp.xhtml',·1,·'(Global·Namespace)']138 ········['../tests_2poscalc_8cpp.xhtml',·1,·'(Global·Namespace)']
139 ····]],139 ····]],
140 ····['poscalc_2eh_124',·['poscalc.h',·['../poscalc_8h.xhtml',·1,·'']]],140 ····['poscalc_2eh_124',·['poscalc.h',·['../poscalc_8h.xhtml',·1,·'']]],
141 ····['position_2ecpp_125',·['position.cpp',·['../position_8cpp.xhtml',·1,·'']]],141 ····['position_2ecpp_125',·['position.cpp',·['../position_8cpp.xhtml',·1,·'']]],
142 ····['position_2eh_126',·['position.h',·['../position_8h.xhtml',·1,·'']]],142 ····['position_2eh_126',·['position.h',·['../position_8h.xhtml',·1,·'']]],
143 ····['position_5frestraints_2ecpp_127',·['position_restraints.cpp',·['../position__restraints_8cpp.xhtml',·1,·'(Global·Namespace)'],143 ····['position_5frestraints_2ecpp_127',·['position_restraints.cpp',·['../position__restraints_8cpp.xhtml',·1,·'(Global·Namespace)'],
144 ········['../tests_2position__restraints_8cpp.xhtml',·1,·'(Global·Namespace)']144 ········['../tests_2position__restraints_8cpp.xhtml',·1,·'(Global·Namespace)']
145 ····]],145 ····]],
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Offset 4, 20 lines modifiedOffset 4, 20 lines modified
4 ····]],4 ····]],
5 ····['qmmm_2eh_1',·['qmmm.h',·['../qmmm_8h.xhtml',·1,·'']]],5 ····['qmmm_2eh_1',·['qmmm.h',·['../qmmm_8h.xhtml',·1,·'']]],
6 ····['qmmmforceprovider_2ecpp_2',·['qmmmforceprovider.cpp',·['../qmmmforceprovider_8cpp.xhtml',·1,·'(Global·Namespace)'],6 ····['qmmmforceprovider_2ecpp_2',·['qmmmforceprovider.cpp',·['../qmmmforceprovider_8cpp.xhtml',·1,·'(Global·Namespace)'],
7 ········['../tests_2qmmmforceprovider_8cpp.xhtml',·1,·'(Global·Namespace)']7 ········['../tests_2qmmmforceprovider_8cpp.xhtml',·1,·'(Global·Namespace)']
8 ····]],8 ····]],
9 ····['qmmmforceprovider_2eh_3',·['qmmmforceprovider.h',·['../qmmmforceprovider_8h.xhtml',·1,·'']]],9 ····['qmmmforceprovider_2eh_3',·['qmmmforceprovider.h',·['../qmmmforceprovider_8h.xhtml',·1,·'']]],
10 ····['qmmmforceprovider_5fstub_2ecpp_4',·['qmmmforceprovider_stub.cpp',·['../qmmmforceprovider__stub_8cpp.xhtml',·1,·'']]],10 ····['qmmmforceprovider_5fstub_2ecpp_4',·['qmmmforceprovider_stub.cpp',·['../qmmmforceprovider__stub_8cpp.xhtml',·1,·'']]],
11 ····['qmmminputgenerator_2ecpp_5',·['qmmminputgenerator.cpp',·['../qmmminputgenerator_8cpp.xhtml',·1,·'(Global·Namespace)'],11 ····['qmmminputgenerator_2ecpp_5',·['qmmminputgenerator.cpp',·['../tests_2qmmminputgenerator_8cpp.xhtml',·1,·'(Global·Namespace)'],
12 ········['../tests_2qmmminputgenerator_8cpp.xhtml',·1,·'(Global·Namespace)']12 ········['../qmmminputgenerator_8cpp.xhtml',·1,·'(Global·Namespace)']
13 ····]],13 ····]],
14 ····['qmmminputgenerator_2eh_6',·['qmmminputgenerator.h',·['../qmmminputgenerator_8h.xhtml',·1,·'']]],14 ····['qmmminputgenerator_2eh_6',·['qmmminputgenerator.h',·['../qmmminputgenerator_8h.xhtml',·1,·'']]],
15 ····['qmmmoptions_2ecpp_7',·['qmmmoptions.cpp',·['../qmmmoptions_8cpp.xhtml',·1,·'(Global·Namespace)'],15 ····['qmmmoptions_2ecpp_7',·['qmmmoptions.cpp',·['../tests_2qmmmoptions_8cpp.xhtml',·1,·'(Global·Namespace)'],
16 ········['../tests_2qmmmoptions_8cpp.xhtml',·1,·'(Global·Namespace)']16 ········['../qmmmoptions_8cpp.xhtml',·1,·'(Global·Namespace)']
17 ····]],17 ····]],
18 ····['qmmmoptions_2eh_8',·['qmmmoptions.h',·['../qmmmoptions_8h.xhtml',·1,·'']]],18 ····['qmmmoptions_2eh_8',·['qmmmoptions.h',·['../qmmmoptions_8h.xhtml',·1,·'']]],
19 ····['qmmmtopologypreprocessor_2ecpp_9',·['qmmmtopologypreprocessor.cpp',·['../qmmmtopologypreprocessor_8cpp.xhtml',·1,·'(Global·Namespace)'],19 ····['qmmmtopologypreprocessor_2ecpp_9',·['qmmmtopologypreprocessor.cpp',·['../qmmmtopologypreprocessor_8cpp.xhtml',·1,·'(Global·Namespace)'],
20 ········['../tests_2qmmmtopologypreprocessor_8cpp.xhtml',·1,·'(Global·Namespace)']20 ········['../tests_2qmmmtopologypreprocessor_8cpp.xhtml',·1,·'(Global·Namespace)']
21 ····]],21 ····]],
22 ····['qmmmtopologypreprocessor_2eh_10',·['qmmmtopologypreprocessor.h',·['../qmmmtopologypreprocessor_8h.xhtml',·1,·'']]],22 ····['qmmmtopologypreprocessor_2eh_10',·['qmmmtopologypreprocessor.h',·['../qmmmtopologypreprocessor_8h.xhtml',·1,·'']]],
23 ····['qmmmtypes_2eh_11',·['qmmmtypes.h',·['../qmmmtypes_8h.xhtml',·1,·'']]],23 ····['qmmmtypes_2eh_11',·['qmmmtypes.h',·['../qmmmtypes_8h.xhtml',·1,·'']]],
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Offset 152, 15 lines modifiedOffset 152, 15 lines modified
152 </dd>152 </dd>
153 <dt>File·<a·class="el"·href="evaluate_8cpp.xhtml">evaluate.cpp</a>··</dt>153 <dt>File·<a·class="el"·href="evaluate_8cpp.xhtml">evaluate.cpp</a>··</dt>
154 <dd><a·class="anchor"·id="_todo000195"></a>·One·of·the·major·bottlenecks·for·selection·performance·is·that·all·the·evaluation·is·carried·out·for·atoms.·There·are·several·cases·when·the·evaluation·could·be·done·for·residues·or·molecules·instead,·including·keywords·that·select·by·residue·and·cases·where·residue·centers·are·used·as·reference·positions.·Implementing·this·would·require·a·mechanism·for·recognizing·whether·something·can·be·evaluated·by·residue/molecule·instead·by·atom,·and·converting·selections·by·residue/molecule·into·selections·by·atom·when·necessary.·</dd>154 <dd><a·class="anchor"·id="_todo000195"></a>·One·of·the·major·bottlenecks·for·selection·performance·is·that·all·the·evaluation·is·carried·out·for·atoms.·There·are·several·cases·when·the·evaluation·could·be·done·for·residues·or·molecules·instead,·including·keywords·that·select·by·residue·and·cases·where·residue·centers·are·used·as·reference·positions.·Implementing·this·would·require·a·mechanism·for·recognizing·whether·something·can·be·evaluated·by·residue/molecule·instead·by·atom,·and·converting·selections·by·residue/molecule·into·selections·by·atom·when·necessary.·</dd>
155 <dt>File·<a·class="el"·href="exactcontinuation_8cpp.xhtml">exactcontinuation.cpp</a>··</dt>155 <dt>File·<a·class="el"·href="exactcontinuation_8cpp.xhtml">exactcontinuation.cpp</a>··</dt>
156 <dd><a·class="anchor"·id="_todo000231"></a>Extend·the·coverage·to·the·appending·case.·</dd>156 <dd><a·class="anchor"·id="_todo000231"></a>Extend·the·coverage·to·the·appending·case.·</dd>
157 <dt>File·<a·class="el"·href="tests_2expanded_8cpp.xhtml">expanded.cpp</a>··</dt>157 <dt>File·<a·class="el"·href="tests_2expanded_8cpp.xhtml">expanded.cpp</a>··</dt>
158 <dd><a·class="anchor"·id="_todo000105"></a>Add·more·tests·as·the·expanded·ensemble·implementation·gets·more·modular·(#3848).·</dd>158 <dd><a·class="anchor"·id="_todo000105"></a>Add·more·tests·as·the·expanded·ensemble·implementation·gets·more·modular·(#3848).·</dd>
159 <dt>Member·<a·class="el"·href="device__management_8cpp.xhtml#a0579937ac9ed3975d887a3d976d94899">findDevices</a>··()</dt>159 <dt>Member·<a·class="el"·href="device__management__sycl_8cpp.xhtml#a0579937ac9ed3975d887a3d976d94899">findDevices</a>··()</dt>
160 <dd><a·class="anchor"·id="_todo000064"></a>:·Check·if·errors·do·propagate·in·OpenCL·as·they·do·in·CUDA·and·whether·there·is·a·mechanism·to·"clear"·them.·</dd>160 <dd><a·class="anchor"·id="_todo000064"></a>:·Check·if·errors·do·propagate·in·OpenCL·as·they·do·in·CUDA·and·whether·there·is·a·mechanism·to·"clear"·them.·</dd>
161 <dt>Member·<a·class="el"·href="expfit_8h.xhtml#a560ea7d97277b9e0576776ec695fb9b3">fit_acf</a>··(int·ncorr,·int·fitfn,·const·gmx_output_env_t·*oenv,·gmx_bool·bVerbose,·real·tbeginfit,·real·tendfit,·real·dt,·real·c1[],·real·*fit)</dt>161 <dt>Member·<a·class="el"·href="expfit_8h.xhtml#a560ea7d97277b9e0576776ec695fb9b3">fit_acf</a>··(int·ncorr,·int·fitfn,·const·gmx_output_env_t·*oenv,·gmx_bool·bVerbose,·real·tbeginfit,·real·tendfit,·real·dt,·real·c1[],·real·*fit)</dt>
162 <dd><a·class="anchor"·id="_todo000015"></a>check·parameters··</dd>162 <dd><a·class="anchor"·id="_todo000015"></a>check·parameters··</dd>
163 <dt>Member·<a·class="el"·href="src_2gromacs_2listed__forces_2utilities_8h.xhtml#a02435a07d79c82f6d260d8a2dcc82b90">ftype_is_bonded_potential</a>··(int·ftype)</dt>163 <dt>Member·<a·class="el"·href="src_2gromacs_2listed__forces_2utilities_8h.xhtml#a02435a07d79c82f6d260d8a2dcc82b90">ftype_is_bonded_potential</a>··(int·ftype)</dt>
164 <dd><a·class="anchor"·id="_todo000076"></a>This·function·could·go·away·when·idef·is·not·a·big·bucket·of·everything.··</dd>164 <dd><a·class="anchor"·id="_todo000076"></a>This·function·could·go·away·when·idef·is·not·a·big·bucket·of·everything.··</dd>
165 <dt>Member·<a·class="el"·href="device__management__common_8cpp.xhtml#a4c6f328aacc0b724c1b5731fed2744eb">getDeviceComputeUnitFactor</a>··(const·<a·class="el"·href="structDeviceInformation.xhtml"·title="Platform-dependent·device·information.">DeviceInformation</a>·&amp;deviceInfo)</dt>165 <dt>Member·<a·class="el"·href="device__management__common_8cpp.xhtml#a4c6f328aacc0b724c1b5731fed2744eb">getDeviceComputeUnitFactor</a>··(const·<a·class="el"·href="structDeviceInformation.xhtml"·title="Platform-dependent·device·information.">DeviceInformation</a>·&amp;deviceInfo)</dt>
166 <dd><a·class="anchor"·id="_todo000063"></a>:·Handled·AMD·RDNA?·</dd>166 <dd><a·class="anchor"·id="_todo000063"></a>:·Handled·AMD·RDNA?·</dd>
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475 <dd><p·class="startdd"><a·class="anchor"·id="_todo000273"></a>Eventually·t_trxframe·should·be·replaced·by·a·class·such·as·this.·Currently·we·need·to·introduce·BoxMatrix·so·that·we·can·have·a·normal·C++·getter·that·returns·the·contents·of·a·box·matrix,·since·you·cannot·use·a·real[DIM][DIM]·as·a·function·return·type.</p>475 <dd><p·class="startdd"><a·class="anchor"·id="_todo000273"></a>Eventually·t_trxframe·should·be·replaced·by·a·class·such·as·this.·Currently·we·need·to·introduce·BoxMatrix·so·that·we·can·have·a·normal·C++·getter·that·returns·the·contents·of·a·box·matrix,·since·you·cannot·use·a·real[DIM][DIM]·as·a·function·return·type.</p>
476 <p·class="enddd"><a·class="anchor"·id="_todo000274"></a>Consider·a·std::optional·work-alike·type·for·expressing·that·a·field·may·or·may·not·have·content.··</p>476 <p·class="enddd"><a·class="anchor"·id="_todo000274"></a>Consider·a·std::optional·work-alike·type·for·expressing·that·a·field·may·or·may·not·have·content.··</p>
477 </dd>477 </dd>
478 <dt>Struct·<a·class="el"·href="structgmx__hw__opt__t.xhtml">gmx_hw_opt_t</a>··</dt>478 <dt>Struct·<a·class="el"·href="structgmx__hw__opt__t.xhtml">gmx_hw_opt_t</a>··</dt>
479 <dd><a·class="anchor"·id="_todo000067"></a>During·mdrunner(),·if·the·user·has·left·any·of·these·values·at·their·defaults·(which·tends·to·mean·"choose·automatically"),·then·those·values·are·over-written·with·the·result·of·such·automation.·This·creates·problems·for·the·subsequent·code·in·knowing·what·was·done,·why,·and·reporting·correctly·to·the·user.·Find·a·way·to·improve·this.··</dd>479 <dd><a·class="anchor"·id="_todo000067"></a>During·mdrunner(),·if·the·user·has·left·any·of·these·values·at·their·defaults·(which·tends·to·mean·"choose·automatically"),·then·those·values·are·over-written·with·the·result·of·such·automation.·This·creates·problems·for·the·subsequent·code·in·knowing·what·was·done,·why,·and·reporting·correctly·to·the·user.·Find·a·way·to·improve·this.··</dd>
480 <dt>Struct·<a·class="el"·href="structgmx__multisim__t.xhtml">gmx_multisim_t</a>··</dt>480 <dt>Struct·<a·class="el"·href="structgmx__multisim__t.xhtml">gmx_multisim_t</a>··</dt>
481 <dd><a·class="anchor"·id="_todo000154"></a>Change·this·to·class··</dd>481 <dd><a·class="anchor"·id="_todo000154"></a>Change·this·to·class··</dd>
482 <dt>Member·<a·class="el"·href="pme_8h.xhtml#adc07e6be8d5225d0d192c27ccc474124">gmx_pme_init</a>··(const·t_commrec·*cr,·const·<a·class="el"·href="structNumPmeDomains.xhtml"·title="Struct·for·passing·around·the·number·of·PME·domains.">NumPmeDomains</a>·&amp;numPmeDomains,·const·t_inputrec·*ir,·const·matrix·box,·real·haloExtentForAtomDisplacement,·gmx_bool·bFreeEnergy_q,·gmx_bool·bFreeEnergy_lj,·gmx_bool·bReproducible,·real·ewaldcoeff_q,·real·ewaldcoeff_lj,·int·nthread,·PmeRunMode·runMode,·<a·class="el"·href="structPmeGpu.xhtml"·title="The·main·PME·GPU·host·structure,·included·in·the·PME·CPU·structure·by·pointer.">PmeGpu</a>·*pmeGpu,·const·DeviceContext·*deviceContext,·const·<a·class="el"·href="classDeviceStream.xhtml"·title="Declaration·of·platform-agnostic·device·stream/queue.">DeviceStream</a>·*deviceStream,·const·<a·class="el"·href="classPmeGpuProgram.xhtml"·title="Stores·PME·data·derived·from·the·GPU·context·or·devices.">PmeGpuProgram</a>·*pmeGpuProgram,·const·<a·class="el"·href="classgmx_1_1MDLogger.xhtml"·title="Declares·a·logging·interface.">gmx::MDLogger</a>·&amp;mdlog)</dt>482 <dt>Member·<a·class="el"·href="pme_8cpp.xhtml#adc07e6be8d5225d0d192c27ccc474124">gmx_pme_init</a>··(const·t_commrec·*cr,·const·<a·class="el"·href="structNumPmeDomains.xhtml"·title="Struct·for·passing·around·the·number·of·PME·domains.">NumPmeDomains</a>·&amp;numPmeDomains,·const·t_inputrec·*ir,·const·matrix·box,·real·haloExtentForAtomDisplacement,·gmx_bool·bFreeEnergy_q,·gmx_bool·bFreeEnergy_lj,·gmx_bool·bReproducible,·real·ewaldcoeff_q,·real·ewaldcoeff_lj,·int·nthread,·PmeRunMode·runMode,·<a·class="el"·href="structPmeGpu.xhtml"·title="The·main·PME·GPU·host·structure,·included·in·the·PME·CPU·structure·by·pointer.">PmeGpu</a>·*pmeGpu,·const·DeviceContext·*deviceContext,·const·<a·class="el"·href="classDeviceStream.xhtml"·title="Declaration·of·platform-agnostic·device·stream/queue.">DeviceStream</a>·*deviceStream,·const·<a·class="el"·href="classPmeGpuProgram.xhtml"·title="Stores·PME·data·derived·from·the·GPU·context·or·devices.">PmeGpuProgram</a>·*pmeGpuProgram,·const·<a·class="el"·href="classgmx_1_1MDLogger.xhtml"·title="Declares·a·logging·interface.">gmx::MDLogger</a>·&amp;mdlog)</dt>
483 <dd><a·class="anchor"·id="_todo000026"></a>We·should·evolve·something·like·a·<code>GpuManager</code>·that·holds·<code>DeviceInformation*</code>·and·<code>PmeGpuProgram*</code>·and·perhaps·other·related·things·whose·lifetime·can/should·exceed·that·of·a·task·(or·perhaps·task·manager).·See·Issue·#2522.··</dd>483 <dd><a·class="anchor"·id="_todo000026"></a>We·should·evolve·something·like·a·<code>GpuManager</code>·that·holds·<code>DeviceInformation*</code>·and·<code>PmeGpuProgram*</code>·and·perhaps·other·related·things·whose·lifetime·can/should·exceed·that·of·a·task·(or·perhaps·task·manager).·See·Issue·#2522.··</dd>
484 <dt>Member·<a·class="el"·href="group__module__utility.xhtml#ga33e34477bae2bbb86c4d9af1823e3fd0">GMX_UNUSED_VALUE</a>··(value)</dt>484 <dt>Member·<a·class="el"·href="group__module__utility.xhtml#ga33e34477bae2bbb86c4d9af1823e3fd0">GMX_UNUSED_VALUE</a>··(value)</dt>
485 <dd><a·class="anchor"·id="_todo000280"></a>Deprecated·-·use·gmx_unused··</dd>485 <dd><a·class="anchor"·id="_todo000280"></a>Deprecated·-·use·gmx_unused··</dd>
486 <dt>File·<a·class="el"·href="programs_2mdrun_2tests_2grompp_8cpp.xhtml">grompp.cpp</a>··</dt>486 <dt>File·<a·class="el"·href="programs_2mdrun_2tests_2grompp_8cpp.xhtml">grompp.cpp</a>··</dt>
487 <dd><a·class="anchor"·id="_todo000236"></a>Refactor·SimulationRunner·to·split·off·SimulationPreparer,·so·that·integration·tests·of·grompp·can·stand·apart·from·tests·of·mdrun.·</dd>487 <dd><a·class="anchor"·id="_todo000236"></a>Refactor·SimulationRunner·to·split·off·SimulationPreparer,·so·that·integration·tests·of·grompp·can·stand·apart·from·tests·of·mdrun.·</dd>
488 <dt>File·<a·class="el"·href="haloexchange__mpi_8cpp.xhtml">haloexchange_mpi.cpp</a>··</dt>488 <dt>File·<a·class="el"·href="haloexchange__mpi_8cpp.xhtml">haloexchange_mpi.cpp</a>··</dt>
489 <dd><a·class="anchor"·id="_todo000022"></a>Add·3D·case·</dd>489 <dd><a·class="anchor"·id="_todo000022"></a>Add·3D·case·</dd>
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563 <dd><a·class="anchor"·id="_todo000034"></a>Some·renaming/refactoring,·which·does·not·impair·the·performance:·&ndash;·<a·class="el"·href="structPmeGpuSettings.xhtml"·title="The·PME·GPU·settings·structure,·included·in·the·main·PME·GPU·structure·by·value.">PmeGpuSettings</a>·-&gt;·PmeGpuTasks·</dd>563 <dd><a·class="anchor"·id="_todo000034"></a>Some·renaming/refactoring,·which·does·not·impair·the·performance:·&ndash;·<a·class="el"·href="structPmeGpuSettings.xhtml"·title="The·PME·GPU·settings·structure,·included·in·the·main·PME·GPU·structure·by·value.">PmeGpuSettings</a>·-&gt;·PmeGpuTasks·</dd>
564 <dt>File·<a·class="el"·href="pme__gpu__staging_8h.xhtml">pme_gpu_staging.h</a>··</dt>564 <dt>File·<a·class="el"·href="pme__gpu__staging_8h.xhtml">pme_gpu_staging.h</a>··</dt>
565 <dd><a·class="anchor"·id="_todo000035"></a>Some·renaming/refactoring,·which·does·not·impair·the·performance:·&ndash;·bringing·the·function·names·up·to·guidelines·&ndash;·<a·class="el"·href="structPmeGpuSettings.xhtml"·title="The·PME·GPU·settings·structure,·included·in·the·main·PME·GPU·structure·by·value.">PmeGpuSettings</a>·-&gt;·PmeGpuTasks·&ndash;·refining·GPU·notation·application·(#2053)·&ndash;·renaming·coefficients·to·charges·(?)·</dd>565 <dd><a·class="anchor"·id="_todo000035"></a>Some·renaming/refactoring,·which·does·not·impair·the·performance:·&ndash;·bringing·the·function·names·up·to·guidelines·&ndash;·<a·class="el"·href="structPmeGpuSettings.xhtml"·title="The·PME·GPU·settings·structure,·included·in·the·main·PME·GPU·structure·by·value.">PmeGpuSettings</a>·-&gt;·PmeGpuTasks·&ndash;·refining·GPU·notation·application·(#2053)·&ndash;·renaming·coefficients·to·charges·(?)·</dd>
566 <dt>Member·<a·class="el"·href="pme_8h.xhtml#a9faddde52f5a636410141f52cc95d3e1">pme_gpu_task_enabled</a>··(const·gmx_pme_t·*pme)</dt>566 <dt>Member·<a·class="el"·href="pme_8h.xhtml#a9faddde52f5a636410141f52cc95d3e1">pme_gpu_task_enabled</a>··(const·gmx_pme_t·*pme)</dt>
567 <dd><a·class="anchor"·id="_todo000028"></a>This·is·a·rather·static·data·that·should·be·managed·by·the·hardware·assignment·manager.·For·now,·it·is·synonymous·with·the·active·PME·codepath·(in·the·absence·of·dynamic·switching).·</dd>567 <dd><a·class="anchor"·id="_todo000028"></a>This·is·a·rather·static·data·that·should·be·managed·by·the·hardware·assignment·manager.·For·now,·it·is·synonymous·with·the·active·PME·codepath·(in·the·absence·of·dynamic·switching).·</dd>
568 <dt>File·<a·class="el"·href="pme__gpu__types__host_8h.xhtml">pme_gpu_types_host.h</a>··</dt>568 <dt>File·<a·class="el"·href="pme__gpu__types__host_8h.xhtml">pme_gpu_types_host.h</a>··</dt>
569 <dd><a·class="anchor"·id="_todo000036"></a>Some·renaming/refactoring,·which·does·not·impair·the·performance:·&ndash;·bringing·the·function·names·up·to·guidelines·&ndash;·<a·class="el"·href="structPmeGpuSettings.xhtml"·title="The·PME·GPU·settings·structure,·included·in·the·main·PME·GPU·structure·by·value.">PmeGpuSettings</a>·-&gt;·PmeGpuTasks·&ndash;·refining·GPU·notation·application·(#2053)·&ndash;·renaming·coefficients·to·charges·(?)·</dd>569 <dd><a·class="anchor"·id="_todo000036"></a>Some·renaming/refactoring,·which·does·not·impair·the·performance:·&ndash;·bringing·the·function·names·up·to·guidelines·&ndash;·<a·class="el"·href="structPmeGpuSettings.xhtml"·title="The·PME·GPU·settings·structure,·included·in·the·main·PME·GPU·structure·by·value.">PmeGpuSettings</a>·-&gt;·PmeGpuTasks·&ndash;·refining·GPU·notation·application·(#2053)·&ndash;·renaming·coefficients·to·charges·(?)·</dd>
570 <dt>Member·<a·class="el"·href="pme_8h.xhtml#a9cfbe9fa691aabaf1a9e10fa06858c96">pme_run_mode</a>··(const·gmx_pme_t·*pme)</dt>570 <dt>Member·<a·class="el"·href="pme_8cpp.xhtml#a9cfbe9fa691aabaf1a9e10fa06858c96">pme_run_mode</a>··(const·gmx_pme_t·*pme)</dt>
571 <dd><a·class="anchor"·id="_todo000027"></a>This·is·a·rather·static·data·that·should·be·managed·by·the·higher·level·task·scheduler.·</dd>571 <dd><a·class="anchor"·id="_todo000027"></a>This·is·a·rather·static·data·that·should·be·managed·by·the·higher·level·task·scheduler.·</dd>
572 <dt>Member·<a·class="el"·href="structPmeGpu.xhtml#a592a545094c1ba0847e5e5223c981cc9">PmeGpu::kernelParams</a>··</dt>572 <dt>Member·<a·class="el"·href="structPmeGpu.xhtml#a592a545094c1ba0847e5e5223c981cc9">PmeGpu::kernelParams</a>··</dt>
573 <dd><a·class="anchor"·id="_todo000038"></a>Test·whether·this·should·be·copied·to·the·constant·GPU·memory·once·for·each·computation·(or·even·less·often·with·no·box·updates)·instead·of·being·an·argument.··</dd>573 <dd><a·class="anchor"·id="_todo000038"></a>Test·whether·this·should·be·copied·to·the·constant·GPU·memory·once·for·each·computation·(or·even·less·often·with·no·box·updates)·instead·of·being·an·argument.··</dd>
574 <dt>Struct·<a·class="el"·href="structPmeGpuProgramImpl.xhtml">PmeGpuProgramImpl</a>··</dt>574 <dt>Struct·<a·class="el"·href="structPmeGpuProgramImpl.xhtml">PmeGpuProgramImpl</a>··</dt>
575 <dd><a·class="anchor"·id="_todo000033"></a>In·future·if·we·would·need·to·react·to·either·user·input·or·auto-tuning·to·compile·different·kernels,·then·we·might·wish·to·revisit·the·number·of·kernels·we·pre-compile,·and/or·the·management·of·their·lifetime.·</dd>575 <dd><a·class="anchor"·id="_todo000033"></a>In·future·if·we·would·need·to·react·to·either·user·input·or·auto-tuning·to·compile·different·kernels,·then·we·might·wish·to·revisit·the·number·of·kernels·we·pre-compile,·and/or·the·management·of·their·lifetime.·</dd>
576 <dt>Member·<a·class="el"·href="pme_8h.xhtml#adc082ed1af9a4868af13352373ed3791">PmeRunMode</a>··</dt>576 <dt>Member·<a·class="el"·href="pme_8h.xhtml#adc082ed1af9a4868af13352373ed3791">PmeRunMode</a>··</dt>
577 <dd><a·class="anchor"·id="_todo000025"></a>:·make·this·enum·class·with·gmx_pme_t·C++·refactoring··</dd>577 <dd><a·class="anchor"·id="_todo000025"></a>:·make·this·enum·class·with·gmx_pme_t·C++·refactoring··</dd>
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584 <dd><p·class="startdd"><a·class="anchor"·id="_todo000200"></a>·There·is·probably·some·room·for·optimization·in·the·calculation·of·positions·with·bases.·In·particular,·the·current·implementation·may·do·a·lot·of·unnecessary·copying.·The·interface·would·need·to·be·changed·to·make·it·possible·to·use·the·same·output·positions·for·several·calculations.</p>584 <dd><p·class="startdd"><a·class="anchor"·id="_todo000200"></a>·There·is·probably·some·room·for·optimization·in·the·calculation·of·positions·with·bases.·In·particular,·the·current·implementation·may·do·a·lot·of·unnecessary·copying.·The·interface·would·need·to·be·changed·to·make·it·possible·to·use·the·same·output·positions·for·several·calculations.</p>
585 <p·class="enddd"><a·class="anchor"·id="_todo000201"></a>·The·current·algorithm·for·setting·up·base·calculations·could·be·improved·in·cases·when·there·are·calculations·that·cannot·use·a·common·base·but·still·overlap·partially·(e.g.,·with·three·calculations·A,·B,·and·C·such·that·A·could·use·both·B·and·C·as·a·base,·but·B·and·C·cannot·use·the·same·base).·Setting·up·the·bases·in·an·optimal·manner·in·every·possible·situation·can·be·quite·difficult·unless·several·bases·are·allowed·for·one·calculation,·but·better·heuristics·could·probably·be·implemented.·For·best·results,·the·setup·should·probably·be·postponed·(at·least·partially)·to·gmx_ana_poscalc_init_eval().·</p>585 <p·class="enddd"><a·class="anchor"·id="_todo000201"></a>·The·current·algorithm·for·setting·up·base·calculations·could·be·improved·in·cases·when·there·are·calculations·that·cannot·use·a·common·base·but·still·overlap·partially·(e.g.,·with·three·calculations·A,·B,·and·C·such·that·A·could·use·both·B·and·C·as·a·base,·but·B·and·C·cannot·use·the·same·base).·Setting·up·the·bases·in·an·optimal·manner·in·every·possible·situation·can·be·quite·difficult·unless·several·bases·are·allowed·for·one·calculation,·but·better·heuristics·could·probably·be·implemented.·For·best·results,·the·setup·should·probably·be·postponed·(at·least·partially)·to·gmx_ana_poscalc_init_eval().·</p>
586 </dd>586 </dd>
587 <dt>Member·<a·class="el"·href="classPreprocessingAtomTypes.xhtml#a090d8271a1507ac7d51d0c81dfbf9d0e">PreprocessingAtomTypes::atomTypeFromName</a>··(const·std::string·&amp;str)·const</dt>587 <dt>Member·<a·class="el"·href="classPreprocessingAtomTypes.xhtml#a090d8271a1507ac7d51d0c81dfbf9d0e">PreprocessingAtomTypes::atomTypeFromName</a>··(const·std::string·&amp;str)·const</dt>
588 <dd><a·class="anchor"·id="_todo000041"></a>The·code·should·be·changed·to·instead·use·a·<a·class="el"·href="namespacegmx_1_1compat.xhtml"·title="Compatibility·aliases·for·standard·library·features.">gmx::compat</a>·version·of·std::optional·to·return·an·iterator·to·the·element·being·searched,·or·an·empty·optional·construct·if·the·entry·has·not·been·found.·</dd>588 <dd><a·class="anchor"·id="_todo000041"></a>The·code·should·be·changed·to·instead·use·a·<a·class="el"·href="namespacegmx_1_1compat.xhtml"·title="Compatibility·aliases·for·standard·library·features.">gmx::compat</a>·version·of·std::optional·to·return·an·iterator·to·the·element·being·searched,·or·an·empty·optional·construct·if·the·entry·has·not·been·found.·</dd>
589 <dt>Member·<a·class="el"·href="classPreprocessingBondAtomType.xhtml#a7510a392cd62e80ed3dc9687d5548773">PreprocessingBondAtomType::bondAtomTypeFromName</a>··(const·std::string·&amp;str)·const</dt>589 <dt>Member·<a·class="el"·href="classPreprocessingBondAtomType.xhtml#a7510a392cd62e80ed3dc9687d5548773">PreprocessingBondAtomType::bondAtomTypeFromName</a>··(const·std::string·&amp;str)·const</dt>
590 <dd><a·class="anchor"·id="_todo000042"></a>The·code·should·be·changed·to·instead·use·a·<a·class="el"·href="namespacegmx_1_1compat.xhtml"·title="Compatibility·aliases·for·standard·library·features.">gmx::compat</a>·version·of·std::optional·to·return·a·handle·to·the·element·being·searched,·or·an·empty·optional·construct·if·the·entry·has·not·been·found.·</dd>590 <dd><a·class="anchor"·id="_todo000042"></a>The·code·should·be·changed·to·instead·use·a·<a·class="el"·href="namespacegmx_1_1compat.xhtml"·title="Compatibility·aliases·for·standard·library·features.">gmx::compat</a>·version·of·std::optional·to·return·a·handle·to·the·element·being·searched,·or·an·empty·optional·construct·if·the·entry·has·not·been·found.·</dd>
591 <dt>Member·<a·class="el"·href="device__management_8cpp.xhtml#a0eb4c2d2b9b13568750d7dadd7fe49f0">releaseDevice</a>··(<a·class="el"·href="structDeviceInformation.xhtml"·title="Platform-dependent·device·information.">DeviceInformation</a>·*)</dt>591 <dt>Member·<a·class="el"·href="device__management__sycl_8cpp.xhtml#a0eb4c2d2b9b13568750d7dadd7fe49f0">releaseDevice</a>··(<a·class="el"·href="structDeviceInformation.xhtml"·title="Platform-dependent·device·information.">DeviceInformation</a>·*)</dt>
592 <dd><a·class="anchor"·id="_todo000065"></a>This·should·go·through·all·the·devices,·not·only·the·one·currently·active.·Reseting·only·one·device·will·not·work,·e.g.·in·CUDA·tests.·</dd>592 <dd><a·class="anchor"·id="_todo000065"></a>This·should·go·through·all·the·devices,·not·only·the·one·currently·active.·Reseting·only·one·device·will·not·work,·e.g.·in·CUDA·tests.·</dd>
593 <dt>Member·<a·class="el"·href="selelem_8h.xhtml#a6fee1910b915d2f6e873f134e297ab47">SEL_ALLOCVAL</a>··</dt>593 <dt>Member·<a·class="el"·href="selelem_8h.xhtml#a6fee1910b915d2f6e873f134e297ab47">SEL_ALLOCVAL</a>··</dt>
594 <dd><a·class="anchor"·id="_todo000202"></a>·This·flag·overlaps·with·the·function·of·<code>v.nalloc</code>·field,·and·could·probably·be·removed,·making·memory·management·simpler.·Currently,·the·<code>v.nalloc</code>·field·is·not·kept·up-to-date·in·all·cases·when·this·flag·is·changed·and·is·used·in·places·where·this·flag·is·not,·so·this·would·require·a·careful·investigation·of·the·selection·code.··</dd>594 <dd><a·class="anchor"·id="_todo000202"></a>·This·flag·overlaps·with·the·function·of·<code>v.nalloc</code>·field,·and·could·probably·be·removed,·making·memory·management·simpler.·Currently,·the·<code>v.nalloc</code>·field·is·not·kept·up-to-date·in·all·cases·when·this·flag·is·changed·and·is·used·in·places·where·this·flag·is·not,·so·this·would·require·a·careful·investigation·of·the·selection·code.··</dd>
595 <dt>Page·<a·class="el"·href="page_module_selection_compiler.xhtml">Selection·compilation</a>··</dt>595 <dt>Page·<a·class="el"·href="page_module_selection_compiler.xhtml">Selection·compilation</a>··</dt>
596 <dd><a·class="anchor"·id="_todo000194"></a>·Some·combinations·of·method·parameter·flags·are·not·yet·properly·treated·by·the·compiler·or·the·evaluation·functions·in·<a·class="el"·href="evaluate_8cpp.xhtml"·title="Implements·functions·in·evaluate.h.">evaluate.cpp</a>.·All·the·ones·used·by·currently·implemented·methods·should·work,·but·new·combinations·might·not.·</dd>596 <dd><a·class="anchor"·id="_todo000194"></a>·Some·combinations·of·method·parameter·flags·are·not·yet·properly·treated·by·the·compiler·or·the·evaluation·functions·in·<a·class="el"·href="evaluate_8cpp.xhtml"·title="Implements·functions·in·evaluate.h.">evaluate.cpp</a>.·All·the·ones·used·by·currently·implemented·methods·should·work,·but·new·combinations·might·not.·</dd>
597 <dt>Member·<a·class="el"·href="smalloc_8h.xhtml#a767a8def9a62bf063b60c1c87adc11dd">set_over_alloc_dd</a>··(bool·set)</dt>597 <dt>Member·<a·class="el"·href="smalloc_8h.xhtml#a767a8def9a62bf063b60c1c87adc11dd">set_over_alloc_dd</a>··(bool·set)</dt>
598 <dd><a·class="anchor"·id="_todo000284"></a>·This·is·mdrun-specific,·so·it·might·be·better·to·put·this·and·over_alloc_dd()·much·higher·up.··</dd>598 <dd><a·class="anchor"·id="_todo000284"></a>·This·is·mdrun-specific,·so·it·might·be·better·to·put·this·and·over_alloc_dd()·much·higher·up.··</dd>
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549 ····['simd_20preprocessor_20macros_352',·['Predefined·SIMD·preprocessor·macros',·['../page_simd.xhtml#autotoc_md66',·1,·'']]],549 ····['simd_20preprocessor_20macros_352',·['Predefined·SIMD·preprocessor·macros',·['../page_simd.xhtml#autotoc_md66',·1,·'']]],
550 ····['simd_2eh_353',·['simd.h',·['../include_2gromacs_2simd_2simd_8h.xhtml',·1,·'']]],550 ····['simd_2eh_353',·['simd.h',·['../include_2gromacs_2simd_2simd_8h.xhtml',·1,·'']]],
551 ····['simd4_20implementation_354',·['SIMD4·implementation',·['../page_simd.xhtml#autotoc_md64',·1,·'']]],551 ····['simd4_20implementation_354',·['SIMD4·implementation',·['../page_simd.xhtml#autotoc_md64',·1,·'']]],
552 ····['simd4bool_355',·['Simd4Bool',·['../namespacegmx.xhtml#acb6a84be080be397c2c09cda9f315037',·1,·'gmx']]],552 ····['simd4bool_355',·['Simd4Bool',·['../namespacegmx.xhtml#acb6a84be080be397c2c09cda9f315037',·1,·'gmx']]],
553 ····['simd4dbool_356',·['simd4dbool',·['../classgmx_1_1Simd4DBool.xhtml#a428de6b27a42a06dd0fd632660b3ae9d',·1,·'gmx::Simd4DBool::Simd4DBool()'],553 ····['simd4dbool_356',·['simd4dbool',·['../classgmx_1_1Simd4DBool.xhtml#a428de6b27a42a06dd0fd632660b3ae9d',·1,·'gmx::Simd4DBool::Simd4DBool()'],
554 ········['../classgmx_1_1Simd4DBool.xhtml',·1,·'gmx::Simd4DBool']554 ········['../classgmx_1_1Simd4DBool.xhtml',·1,·'gmx::Simd4DBool']
555 ····]],555 ····]],
 556 ····['simd4double_357',·['simd4double',·['../classgmx_1_1Simd4Double.xhtml',·1,·'gmx::Simd4Double'],
556 ····['simd4double_357',·['simd4double',·['../classgmx_1_1Simd4Double.xhtml#a92931f93554548894cd5daa60af49525',·1,·'gmx::Simd4Double::Simd4Double()'],557 ········['../classgmx_1_1Simd4Double.xhtml#a92931f93554548894cd5daa60af49525',·1,·'gmx::Simd4Double::Simd4Double()']
557 ········['../classgmx_1_1Simd4Double.xhtml',·1,·'gmx::Simd4Double'] 
558 ····]],558 ····]],
559 ····['simd4fbool_358',·['simd4fbool',·['../classgmx_1_1Simd4FBool.xhtml#ad64754cbb774d9cab1ed08c49a6e28bc',·1,·'gmx::Simd4FBool::Simd4FBool()'],559 ····['simd4fbool_358',·['simd4fbool',·['../classgmx_1_1Simd4FBool.xhtml#ad64754cbb774d9cab1ed08c49a6e28bc',·1,·'gmx::Simd4FBool::Simd4FBool()'],
560 ········['../classgmx_1_1Simd4FBool.xhtml',·1,·'gmx::Simd4FBool']560 ········['../classgmx_1_1Simd4FBool.xhtml',·1,·'gmx::Simd4FBool']
561 ····]],561 ····]],
562 ····['simd4float_359',·['simd4float',·['../classgmx_1_1Simd4Float.xhtml#a4d61d22b9955c0f6fa78804562704cbe',·1,·'gmx::Simd4Float::Simd4Float()'],562 ····['simd4float_359',·['simd4float',·['../classgmx_1_1Simd4Float.xhtml#a4d61d22b9955c0f6fa78804562704cbe',·1,·'gmx::Simd4Float::Simd4Float()'],
563 ········['../classgmx_1_1Simd4Float.xhtml',·1,·'gmx::Simd4Float']563 ········['../classgmx_1_1Simd4Float.xhtml',·1,·'gmx::Simd4Float']
564 ····]],564 ····]],
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24 ····['unitcellistriclinic_16',·['UnitCellIsTriclinic',·['../group__module__coordinateio.xhtml#ggae520b2721d9d5166e7c015b2654bd1d9a99285c8187fb87e756f127435045dc3f',·1,·'gmx']]],24 ····['unitcellistriclinic_16',·['UnitCellIsTriclinic',·['../group__module__coordinateio.xhtml#ggae520b2721d9d5166e7c015b2654bd1d9a99285c8187fb87e756f127435045dc3f',·1,·'gmx']]],
25 ····['unitcelltype_17',·['UnitCellType',·['../namespacegmx.xhtml#af897bff42be729e6eaf3c4dc6e199722',·1,·'gmx']]],25 ····['unitcelltype_17',·['UnitCellType',·['../namespacegmx.xhtml#af897bff42be729e6eaf3c4dc6e199722',·1,·'gmx']]],
26 ····['unitcelltypenames_18',·['unitCellTypeNames',·['../namespacegmx.xhtml#ae81efb97e81499b750d906d26a29ce18',·1,·'gmx']]],26 ····['unitcelltypenames_18',·['unitCellTypeNames',·['../namespacegmx.xhtml#ae81efb97e81499b750d906d26a29ce18',·1,·'gmx']]],
27 ····['unitvector_19',·['unitvector',·['../namespacegmx.xhtml#a5bc71ede59923e4d25b11a995139970a',·1,·'gmx::unitVector()'],27 ····['unitvector_19',·['unitvector',·['../namespacegmx.xhtml#a5bc71ede59923e4d25b11a995139970a',·1,·'gmx::unitVector()'],
28 ········['../classgmx_1_1BasicVector.xhtml#a4e7218ba6cbb3bc735e31a43597ec7a9',·1,·'gmx::BasicVector::unitVector()']28 ········['../classgmx_1_1BasicVector.xhtml#a4e7218ba6cbb3bc735e31a43597ec7a9',·1,·'gmx::BasicVector::unitVector()']
29 ····]],29 ····]],
30 ····['unity_20',·['Unity',·['../namespacegmx.xhtml#ab0ad78613a262a1d4fcce5d18525099fa82dd98f1d663acc318e6a8ec4ab69b7a',·1,·'gmx']]],30 ····['unity_20',·['Unity',·['../namespacegmx.xhtml#ab0ad78613a262a1d4fcce5d18525099fa82dd98f1d663acc318e6a8ec4ab69b7a',·1,·'gmx']]],
31 ····['unknown_21',·['unknown',·['../namespacegmx.xhtml#a20e189e3f31f5f1e8581a5cc84063453a88183b946cc5f0e8c96b2e66e1c74a7e',·1,·'gmx::Unknown'], 
32 ········['../device__information_8h.xhtml#a5514710e3c78d4816da9e8d2e3cd508ca88183b946cc5f0e8c96b2e66e1c74a7e',·1,·'Unknown:&#160;device_information.h'],31 ····['unknown_21',·['unknown',·['../device__information_8h.xhtml#a5514710e3c78d4816da9e8d2e3cd508ca88183b946cc5f0e8c96b2e66e1c74a7e',·1,·'Unknown:&#160;device_information.h'],
 32 ········['../namespacegmx.xhtml#a20e189e3f31f5f1e8581a5cc84063453a88183b946cc5f0e8c96b2e66e1c74a7e',·1,·'gmx::Unknown'],
33 ········['../classgmx_1_1CpuInfo.xhtml#acd7ff27553f3ff9fd1037c30c21a24f1a88183b946cc5f0e8c96b2e66e1c74a7e',·1,·'gmx::CpuInfo::Unknown']33 ········['../classgmx_1_1CpuInfo.xhtml#acd7ff27553f3ff9fd1037c30c21a24f1a88183b946cc5f0e8c96b2e66e1c74a7e',·1,·'gmx::CpuInfo::Unknown']
34 ····]],34 ····]],
35 ····['unpackrecvbufkernel_22',·['unpackRecvBufKernel',·['../namespacegmx.xhtml#a704128fa72f8ce7dcf08d0063a166036',·1,·'gmx']]],35 ····['unpackrecvbufkernel_22',·['unpackRecvBufKernel',·['../namespacegmx.xhtml#a704128fa72f8ce7dcf08d0063a166036',·1,·'gmx']]],
36 ····['unpaddedarrayref_23',·['unpaddedArrayRef',·['../classgmx_1_1ArrayRefWithPadding.xhtml#ad5b878ca7749f5b8f52e006269fbfc2f',·1,·'gmx::ArrayRefWithPadding']]],36 ····['unpaddedarrayref_23',·['unpaddedArrayRef',·['../classgmx_1_1ArrayRefWithPadding.xhtml#ad5b878ca7749f5b8f52e006269fbfc2f',·1,·'gmx::ArrayRefWithPadding']]],
37 ····['unpaddedconstarrayref_24',·['unpaddedConstArrayRef',·['../classgmx_1_1ArrayRefWithPadding.xhtml#a2c3f73497c6bc71264ae1af84b6522ae',·1,·'gmx::ArrayRefWithPadding']]],37 ····['unpaddedconstarrayref_24',·['unpaddedConstArrayRef',·['../classgmx_1_1ArrayRefWithPadding.xhtml#a2c3f73497c6bc71264ae1af84b6522ae',·1,·'gmx::ArrayRefWithPadding']]],
38 ····['unset_25',·['Unset',·['../md__enums_8h.xhtml#a1df3eedfba9424ae3e518284a453d95cac9f88e098f6fe4e4e112eeb05ccb9671',·1,·'md_enums.h']]],38 ····['unset_25',·['Unset',·['../md__enums_8h.xhtml#a1df3eedfba9424ae3e518284a453d95cac9f88e098f6fe4e4e112eeb05ccb9671',·1,·'md_enums.h']]],
39 ····['unsignedchartostring_26',·['unsignedCharToString',·['../group__module__utility.xhtml#ga78b462191d8dbe81225e12d64cdd55a3',·1,·'gmx']]],39 ····['unsignedchartostring_26',·['unsignedCharToString',·['../group__module__utility.xhtml#ga78b462191d8dbe81225e12d64cdd55a3',·1,·'gmx']]],
40 ····['update_27',·['update',·['../classgmx_1_1IRestraintPotential.xhtml#a6bc44212f005dbc7a03acf9a76b1074d',·1,·'gmx::IRestraintPotential::update()'],40 ····['update_27',·['update',·['../classgmx_1_1IRestraintPotential.xhtml#a6bc44212f005dbc7a03acf9a76b1074d',·1,·'gmx::IRestraintPotential::update()'],
41 ········['../classgmx_1_1Update.xhtml',·1,·'gmx::Update'], 
42 ········['../classgmx_1_1Update.xhtml#afcb4065ad13efba2d3aa9b5225125e6f',·1,·'gmx::Update::Update()']41 ········['../classgmx_1_1Update.xhtml#afcb4065ad13efba2d3aa9b5225125e6f',·1,·'gmx::Update::Update()'],
 42 ········['../classgmx_1_1Update.xhtml',·1,·'gmx::Update']
43 ····]],43 ····]],
44 ····['update_5fconstrain_5fgpu_2eh_28',·['update_constrain_gpu.h',·['../update__constrain__gpu_8h.xhtml',·1,·'']]],44 ····['update_5fconstrain_5fgpu_2eh_28',·['update_constrain_gpu.h',·['../update__constrain__gpu_8h.xhtml',·1,·'']]],
45 ····['update_5fcoords_29',·['update_coords',·['../classgmx_1_1Update.xhtml#a07bb5e84363cbcb95a10bc97647526e9',·1,·'gmx::Update']]],45 ····['update_5fcoords_29',·['update_coords',·['../classgmx_1_1Update.xhtml#a07bb5e84363cbcb95a10bc97647526e9',·1,·'gmx::Update']]],
46 ····['update_5fdisres_5fhistory_30',·['update_disres_history',·['../disre_8h.xhtml#a80a6326aadca6d0b6f6f4753e63648e7',·1,·'disre.cpp']]],46 ····['update_5fdisres_5fhistory_30',·['update_disres_history',·['../disre_8h.xhtml#a80a6326aadca6d0b6f6f4753e63648e7',·1,·'disre.cpp']]],
47 ····['update_5ffor_5fconstraint_5fvirial_31',·['update_for_constraint_virial',·['../classgmx_1_1Update.xhtml#acbd679269aa6945d6922c029770e8a84',·1,·'gmx::Update']]],47 ····['update_5ffor_5fconstraint_5fvirial_31',·['update_for_constraint_virial',·['../classgmx_1_1Update.xhtml#acbd679269aa6945d6922c029770e8a84',·1,·'gmx::Update']]],
48 ····['update_5fsd_5fsecond_5fhalf_32',·['update_sd_second_half',·['../classgmx_1_1Update.xhtml#ab0206e61c30553bd8aa268891c466509',·1,·'gmx::Update']]],48 ····['update_5fsd_5fsecond_5fhalf_32',·['update_sd_second_half',·['../classgmx_1_1Update.xhtml#ab0206e61c30553bd8aa268891c466509',·1,·'gmx::Update']]],
49 ····['update_5ftemperature_5fconstants_33',·['update_temperature_constants',·['../classgmx_1_1Update.xhtml#afa5d8919006df7093a2224fbc2f9fd4c',·1,·'gmx::Update']]],49 ····['update_5ftemperature_5fconstants_33',·['update_temperature_constants',·['../classgmx_1_1Update.xhtml#afa5d8919006df7093a2224fbc2f9fd4c',·1,·'gmx::Update']]],
Offset 54, 17 lines modifiedOffset 54, 17 lines modified
54 ····['updatechanged_38',·['UpdateChanged',·['../group__module__testutils.xhtml#gga973016f1f714be0d0eb5599877dcfee8afec701370fbe10a404604cc78512c8ac',·1,·'gmx::test']]],54 ····['updatechanged_38',·['UpdateChanged',·['../group__module__testutils.xhtml#gga973016f1f714be0d0eb5599877dcfee8afec701370fbe10a404604cc78512c8ac',·1,·'gmx::test']]],
55 ····['updateconstraints_39',·['UpdateConstraints',·['../namespacegmx.xhtml#a73202d646d57bcc963d8afd5a16015f0ab0634f71dbc527342668f2a63f1b3510',·1,·'gmx']]],55 ····['updateconstraints_39',·['UpdateConstraints',·['../namespacegmx.xhtml#a73202d646d57bcc963d8afd5a16015f0ab0634f71dbc527342668f2a63f1b3510',·1,·'gmx']]],
56 ····['updatecoordinates_40',·['UpdateCoordinates',·['../namespacegmx.xhtml#a73202d646d57bcc963d8afd5a16015f0a23714d9a49cc46ca81ad32670bde8b5e',·1,·'gmx']]],56 ····['updatecoordinates_40',·['UpdateCoordinates',·['../namespacegmx.xhtml#a73202d646d57bcc963d8afd5a16015f0a23714d9a49cc46ca81ad32670bde8b5e',·1,·'gmx']]],
57 ····['updatecorrelationgridhistory_41',·['updateCorrelationGridHistory',·['../namespacegmx.xhtml#a25892b094f85a4d534ed625143b489e2',·1,·'gmx']]],57 ····['updatecorrelationgridhistory_41',·['updateCorrelationGridHistory',·['../namespacegmx.xhtml#a25892b094f85a4d534ed625143b489e2',·1,·'gmx']]],
58 ····['updateforatompbcjumps_42',·['updateForAtomPbcJumps',·['../classgmx_1_1WholeMoleculeTransform.xhtml#ac2f8cb9aec06b08634aeafdf32eec96e',·1,·'gmx::WholeMoleculeTransform']]],58 ····['updateforatompbcjumps_42',·['updateForAtomPbcJumps',·['../classgmx_1_1WholeMoleculeTransform.xhtml#ac2f8cb9aec06b08634aeafdf32eec96e',·1,·'gmx::WholeMoleculeTransform']]],
59 ····['updatefromcommandline_43',·['updateFromCommandLine',·['../classgmx_1_1LegacyMdrunOptions.xhtml#a0b0230f493d20c663ed23e838dab6692',·1,·'gmx::LegacyMdrunOptions']]],59 ····['updatefromcommandline_43',·['updateFromCommandLine',·['../classgmx_1_1LegacyMdrunOptions.xhtml#a0b0230f493d20c663ed23e838dab6692',·1,·'gmx::LegacyMdrunOptions']]],
60 ····['updateglobalstate_44',·['updateGlobalState',·['../namespacegmx.xhtml#a109fb025f86dc445f7b53afb3f9af2b3',·1,·'gmx']]],60 ····['updateglobalstate_44',·['updateGlobalState',·['../namespacegmx.xhtml#a109fb025f86dc445f7b53afb3f9af2b3',·1,·'gmx']]],
61 ····['updategroups_45',·['updategroups',·['../classgmx_1_1UpdateGroups.xhtml',·1,·'gmx::UpdateGroups'], 
62 ········['../classgmx_1_1UpdateGroups.xhtml#ae953f890b3234f0a98247d77201f2c5e',·1,·'gmx::UpdateGroups::UpdateGroups(std::vector&lt;·RangePartitioning·&gt;·&amp;&amp;updateGroupingPerMoleculeType,·real·maxUpdateGroupRadius)'],61 ····['updategroups_45',·['updategroups',·['../classgmx_1_1UpdateGroups.xhtml#ae953f890b3234f0a98247d77201f2c5e',·1,·'gmx::UpdateGroups::UpdateGroups(std::vector&lt;·RangePartitioning·&gt;·&amp;&amp;updateGroupingPerMoleculeType,·real·maxUpdateGroupRadius)'],
63 ········['../classgmx_1_1UpdateGroups.xhtml#aec6aff66b1a4e1d52f8c164e99579b85',·1,·'gmx::UpdateGroups::UpdateGroups()=default']62 ········['../classgmx_1_1UpdateGroups.xhtml#aec6aff66b1a4e1d52f8c164e99579b85',·1,·'gmx::UpdateGroups::UpdateGroups()=default'],
 63 ········['../classgmx_1_1UpdateGroups.xhtml',·1,·'gmx::UpdateGroups']
64 ····]],64 ····]],
65 ····['updategroups_2eh_46',·['updategroups.h',·['../updategroups_8h.xhtml',·1,·'']]],65 ····['updategroups_2eh_46',·['updategroups.h',·['../updategroups_8h.xhtml',·1,·'']]],
66 ····['updategroupscog_47',·['updategroupscog',·['../classgmx_1_1UpdateGroupsCog.xhtml#a2d5ea1c35c8fa0fa09a22a4924306974',·1,·'gmx::UpdateGroupsCog::UpdateGroupsCog()'],66 ····['updategroupscog_47',·['updategroupscog',·['../classgmx_1_1UpdateGroupsCog.xhtml#a2d5ea1c35c8fa0fa09a22a4924306974',·1,·'gmx::UpdateGroupsCog::UpdateGroupsCog()'],
67 ········['../classgmx_1_1UpdateGroupsCog.xhtml',·1,·'gmx::UpdateGroupsCog']67 ········['../classgmx_1_1UpdateGroupsCog.xhtml',·1,·'gmx::UpdateGroupsCog']
68 ····]],68 ····]],
69 ····['updategroupscog_2eh_48',·['updategroupscog.h',·['../updategroupscog_8h.xhtml',·1,·'']]],69 ····['updategroupscog_2eh_48',·['updategroupscog.h',·['../updategroupscog_8h.xhtml',·1,·'']]],
70 ····['updatehistory_49',·['updatehistory',·['../structt__oriresdata.xhtml#a7806904b5f7dcb25d5dec4555be7b5ac',·1,·'t_oriresdata::updateHistory()'],70 ····['updatehistory_49',·['updatehistory',·['../structt__oriresdata.xhtml#a7806904b5f7dcb25d5dec4555be7b5ac',·1,·'t_oriresdata::updateHistory()'],
Offset 108, 16 lines modifiedOffset 108, 16 lines modified
108 ····['useljcombrule_85',·['useLjCombRule',·['../namespaceNbnxm.xhtml#a4e114b889870c41c6ee9afa76847b0e4',·1,·'Nbnxm']]],108 ····['useljcombrule_85',·['useLjCombRule',·['../namespaceNbnxm.xhtml#a4e114b889870c41c6ee9afa76847b0e4',·1,·'Nbnxm']]],
109 ····['usemdgpugraph_86',·['useMdGpuGraph',·['../classgmx_1_1SimulationWorkload.xhtml#a76cb5c0c6b1dcb6f85e381dfbfc5046f',·1,·'gmx::SimulationWorkload']]],109 ····['usemdgpugraph_86',·['useMdGpuGraph',·['../classgmx_1_1SimulationWorkload.xhtml#a76cb5c0c6b1dcb6f85e381dfbfc5046f',·1,·'gmx::SimulationWorkload']]],
110 ····['usemts_87',·['useMts',·['../classgmx_1_1SimulationWorkload.xhtml#ac585c3fa9df3937cb8ae629aa07df131',·1,·'gmx::SimulationWorkload']]],110 ····['usemts_87',·['useMts',·['../classgmx_1_1SimulationWorkload.xhtml#ac585c3fa9df3937cb8ae629aa07df131',·1,·'gmx::SimulationWorkload']]],
111 ····['usenvshmem_88',·['useNvshmem',·['../classgmx_1_1SimulationWorkload.xhtml#ac092afa60701acf7cdcb00032c48172f',·1,·'gmx::SimulationWorkload']]],111 ····['usenvshmem_88',·['useNvshmem',·['../classgmx_1_1SimulationWorkload.xhtml#ac092afa60701acf7cdcb00032c48172f',·1,·'gmx::SimulationWorkload']]],
112 ····['useonlymtscombinedforcebuffer_89',·['useOnlyMtsCombinedForceBuffer',·['../classgmx_1_1StepWorkload.xhtml#a457f1f1072fc3c9c0f5fb089b92f5f90',·1,·'gmx::StepWorkload']]],112 ····['useonlymtscombinedforcebuffer_89',·['useOnlyMtsCombinedForceBuffer',·['../classgmx_1_1StepWorkload.xhtml#a457f1f1072fc3c9c0f5fb089b92f5f90',·1,·'gmx::StepWorkload']]],
113 ····['userdefinedfloat_5f_90',·['userDefinedFloat_',·['../structgmx_1_1MrcDensityMapHeader.xhtml#abec7c46e44fcc58659f2e4f08ce3ca69',·1,·'gmx::MrcDensityMapHeader']]],113 ····['userdefinedfloat_5f_90',·['userDefinedFloat_',·['../structgmx_1_1MrcDensityMapHeader.xhtml#abec7c46e44fcc58659f2e4f08ce3ca69',·1,·'gmx::MrcDensityMapHeader']]],
114 ····['usergpuids_2eh_91',·['usergpuids.h',·['../usergpuids_8h.xhtml',·1,·'']]],114 ····['usergpuids_2eh_91',·['usergpuids.h',·['../usergpuids_8h.xhtml',·1,·'']]],
 115 ····['userinputerror_92',·['userinputerror',·['../classgmx_1_1UserInputError.xhtml',·1,·'gmx::UserInputError'],
115 ····['userinputerror_92',·['userinputerror',·['../classgmx_1_1UserInputError.xhtml#a07ae9dc1612508d54e18079cebdc4316',·1,·'gmx::UserInputError::UserInputError()'],116 ········['../classgmx_1_1UserInputError.xhtml#a07ae9dc1612508d54e18079cebdc4316',·1,·'gmx::UserInputError::UserInputError()']
116 ········['../classgmx_1_1UserInputError.xhtml',·1,·'gmx::UserInputError'] 
117 ····]],117 ····]],
118 ····['usesimd_93',·['useSimd',·['../classgmx_1_1SettleData.xhtml#a6f48e1b037af7f441ccf2119bc5a3d21',·1,·'gmx::SettleData']]],118 ····['usesimd_93',·['useSimd',·['../classgmx_1_1SettleData.xhtml#a6f48e1b037af7f441ccf2119bc5a3d21',·1,·'gmx::SettleData']]],
119 ····['using_20gromacs_20as_20a_20library_94',·['Using·GROMACS·as·a·library',·['../page_usinglibrary.xhtml',·1,·'index']]],119 ····['using_20gromacs_20as_20a_20library_94',·['Using·GROMACS·as·a·library',·['../page_usinglibrary.xhtml',·1,·'index']]],
120 ····['using_20reference_20data_20in_20c_20tests_95',·['Using·reference·data·in·C++·tests',·['../page_refdata.xhtml',·1,·'index']]],120 ····['using_20reference_20data_20in_20c_20tests_95',·['Using·reference·data·in·C++·tests',·['../page_refdata.xhtml',·1,·'index']]],
121 ····['using_20reference_20data_20in_20code_96',·['Using·reference·data·in·code',·['../page_refdata.xhtml#autotoc_md53',·1,·'']]],121 ····['using_20reference_20data_20in_20code_96',·['Using·reference·data·in·code',·['../page_refdata.xhtml#autotoc_md53',·1,·'']]],
122 ····['using_20the_20modular_20simulator_97',·['Using·the·modular·simulator',·['../page_modularsimulator.xhtml#autotoc_md8',·1,·'']]],122 ····['using_20the_20modular_20simulator_97',·['Using·the·modular·simulator',·['../page_modularsimulator.xhtml#autotoc_md8',·1,·'']]],
123 ····['usingfullelectrostatics_98',·['usingFullElectrostatics',·['../md__enums_8h.xhtml#ad148c04f38d8d7b6817df8516b4c6ff4',·1,·'md_enums.h']]],123 ····['usingfullelectrostatics_98',·['usingFullElectrostatics',·['../md__enums_8h.xhtml#ad148c04f38d8d7b6817df8516b4c6ff4',·1,·'md_enums.h']]],
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72411 ··<compound·refid="tests_2histogram_8cpp"·kind="file"> 
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433 ··············<anchor·id="todo_1_todo000105"/>433 ··············<anchor·id="todo_1_todo000105"/>
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Offset 3198, 15 lines modifiedOffset 3198, 15 lines modified
3198 ··············<ndash/>3198 ··············<ndash/>
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3200 ············</para>3200 ············</para>
3201 ··········</listitem>3201 ··········</listitem>
3202 ··········<varlistentry>3202 ··········<varlistentry>
3203 ············<term>3203 ············<term>
3204 ··············Member3204 ··············Member
3205 ··············<ref·refid="pme_8h_1a9cfbe9fa691aabaf1a9e10fa06858c96"·kindref="member">pme_run_mode</ref>3205 ··············<ref·refid="pme_8cpp_1a9cfbe9fa691aabaf1a9e10fa06858c96"·kindref="member">pme_run_mode</ref>
3206 ··············(const·gmx_pme_t·*pme)3206 ··············(const·gmx_pme_t·*pme)
3207 ············</term>3207 ············</term>
3208 ··········</varlistentry>3208 ··········</varlistentry>
3209 ··········<listitem>3209 ··········<listitem>
3210 ············<para>3210 ············<para>
3211 ··············<anchor·id="todo_1_todo000027"/>3211 ··············<anchor·id="todo_1_todo000027"/>
3212 ··············This·is·a·rather·static·data·that·should·be·managed·by·the·higher·level·task·scheduler.3212 ··············This·is·a·rather·static·data·that·should·be·managed·by·the·higher·level·task·scheduler.
Offset 3307, 15 lines modifiedOffset 3307, 15 lines modified
3307 ··············<ref·refid="namespacegmx_1_1compat"·kindref="compound">gmx::compat</ref>3307 ··············<ref·refid="namespacegmx_1_1compat"·kindref="compound">gmx::compat</ref>
3308 ··············version·of·std::optional·to·return·a·handle·to·the·element·being·searched,·or·an·empty·optional·construct·if·the·entry·has·not·been·found.3308 ··············version·of·std::optional·to·return·a·handle·to·the·element·being·searched,·or·an·empty·optional·construct·if·the·entry·has·not·been·found.
3309 ············</para>3309 ············</para>
3310 ··········</listitem>3310 ··········</listitem>
3311 ··········<varlistentry>3311 ··········<varlistentry>
3312 ············<term>3312 ············<term>
3313 ··············Member3313 ··············Member
3314 ··············<ref·refid="device__management_8cpp_1a0eb4c2d2b9b13568750d7dadd7fe49f0"·kindref="member">releaseDevice</ref>3314 ··············<ref·refid="device__management__sycl_8cpp_1a0eb4c2d2b9b13568750d7dadd7fe49f0"·kindref="member">releaseDevice</ref>
3315 ··············(3315 ··············(
3316 ··············<ref·refid="structDeviceInformation"·kindref="compound">DeviceInformation</ref>3316 ··············<ref·refid="structDeviceInformation"·kindref="compound">DeviceInformation</ref>
3317 ··············*)3317 ··············*)
3318 ············</term>3318 ············</term>
3319 ··········</varlistentry>3319 ··········</varlistentry>
3320 ··········<listitem>3320 ··········<listitem>
3321 ············<para>3321 ············<para>
⊟
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./usr/share/doc/gromacs/html/manual-2024.4-Debian_2024.4_1.pdf
⊟
1.16 KB
pdftotext {} -
    
Offset 17645, 15 lines modifiedOffset 17645, 15 lines modified
17645 Dimitrios·Karkoulis,·Peter·Kasson,·Sebastian·Kehl,·Sebastian·Keller,·Jiri·Kraus,·Per·Larsson,·Viveca·Lindahl,17645 Dimitrios·Karkoulis,·Peter·Kasson,·Sebastian·Kehl,·Sebastian·Keller,·Jiri·Kraus,·Per·Larsson,·Viveca·Lindahl,
17646 Erik·Marklund,·Pieter·Meulenhoff,·Teemu·Murtola,·Sander·Pronk,·Michael·Shirts,·Alfons·Sijbers,·Balint·Soproni,·David·van·der·Spoel,·Peter·Tieleman,·Carsten·Uphoff,·Jon·Vincent,·Teemu·Virolainen,·Christian·Wennberg,17646 Erik·Marklund,·Pieter·Meulenhoff,·Teemu·Murtola,·Sander·Pronk,·Michael·Shirts,·Alfons·Sijbers,·Balint·Soproni,·David·van·der·Spoel,·Peter·Tieleman,·Carsten·Uphoff,·Jon·Vincent,·Teemu·Virolainen,·Christian·Wennberg,
17647 Maarten·Wolf,·Artem·Zhmurov17647 Maarten·Wolf,·Artem·Zhmurov
17648 Project·leaders:·Berk·Hess,·Erik·Lindahl17648 Project·leaders:·Berk·Hess,·Erik·Lindahl
17649 ©·1991·–·2000:17649 ©·1991·–·2000:
17650 Department·of·Biophysical·Chemistry,·University·of·Groningen.·Nijenborgh·4,·9747·AG·Groningen,17650 Department·of·Biophysical·Chemistry,·University·of·Groningen.·Nijenborgh·4,·9747·AG·Groningen,
17651 The·Netherlands.17651 The·Netherlands.
17652 ©·2001·–·2026:17652 ©·2001·–·2024:
17653 The·GROMACS·development·teams·at·the·Royal·Institute·of·Technology·and·Uppsala·University,17653 The·GROMACS·development·teams·at·the·Royal·Institute·of·Technology·and·Uppsala·University,
17654 Sweden.17654 Sweden.
17655 This·manual·is·not·complete·and·has·no·pretension·to·be·so·due·to·lack·of·time·of·the·contributors·–·our·first17655 This·manual·is·not·complete·and·has·no·pretension·to·be·so·due·to·lack·of·time·of·the·contributors·–·our·first
17656 priority·is·to·improve·the·software.·It·is·worked·on·continuously,·which·in·some·cases·might·mean·the·information17656 priority·is·to·improve·the·software.·It·is·worked·on·continuously,·which·in·some·cases·might·mean·the·information
17657 is·not·entirely·correct.17657 is·not·entirely·correct.
17658 Comments·on·form·and·content·are·welcome,·please·send·them·to·the·user·discussion·forum·or·the·developer17658 Comments·on·form·and·content·are·welcome,·please·send·them·to·the·user·discussion·forum·or·the·developer
17659 discussion·forum·(see·our·webpage·or·this·section·on·how·to·contribute·(page·621)),·or·open·an·issue·on·our·issue17659 discussion·forum·(see·our·webpage·or·this·section·on·how·to·contribute·(page·621)),·or·open·an·issue·on·our·issue
⊟
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./usr/share/doc/gromacs/html/reference-manual/preface.html
    
Offset 4353, 15 lines modifiedOffset 4353, 15 lines modified
00011000:·656d·6973·7472·792c·2055·6e69·7665·7273··emistry,·Univers00011000:·656d·6973·7472·792c·2055·6e69·7665·7273··emistry,·Univers
00011010:·6974·7920·6f66·2047·726f·6e69·6e67·656e··ity·of·Groningen00011010:·6974·7920·6f66·2047·726f·6e69·6e67·656e··ity·of·Groningen
00011020:·2e0a·4e69·6a65·6e62·6f72·6768·2034·2c20··..Nijenborgh·4,·00011020:·2e0a·4e69·6a65·6e62·6f72·6768·2034·2c20··..Nijenborgh·4,·
00011030:·3937·3437·2041·4720·4772·6f6e·696e·6765··9747·AG·Groninge00011030:·3937·3437·2041·4720·4772·6f6e·696e·6765··9747·AG·Groninge
00011040:·6e2c·2054·6865·204e·6574·6865·726c·616e··n,·The·Netherlan00011040:·6e2c·2054·6865·204e·6574·6865·726c·616e··n,·The·Netherlan
00011050:·6473·2e3c·2f70·3e0a·3c2f·6469·763e·3c2f··ds.</p>.</div></00011050:·6473·2e3c·2f70·3e0a·3c2f·6469·763e·3c2f··ds.</p>.</div></
00011060:·626c·6f63·6b71·756f·7465·3e0a·3c70·3ec2··blockquote>.<p>.00011060:·626c·6f63·6b71·756f·7465·3e0a·3c70·3ec2··blockquote>.<p>.
00011070:·a920·3230·3031·20e2·8093·2032·3032·363a··.·2001·...·2026:00011070:·a920·3230·3031·20e2·8093·2032·3032·343a··.·2001·...·2024:
00011080:·3c2f·703e·0a3c·626c·6f63·6b71·756f·7465··</p>.<blockquote00011080:·3c2f·703e·0a3c·626c·6f63·6b71·756f·7465··</p>.<blockquote
00011090:·3e0a·3c64·6976·3e3c·703e·5468·6520·4752··>.<div><p>The·GR00011090:·3e0a·3c64·6976·3e3c·703e·5468·6520·4752··>.<div><p>The·GR
000110a0:·4f4d·4143·5320·6465·7665·6c6f·706d·656e··OMACS·developmen000110a0:·4f4d·4143·5320·6465·7665·6c6f·706d·656e··OMACS·developmen
000110b0:·7420·7465·616d·7320·6174·2074·6865·2052··t·teams·at·the·R000110b0:·7420·7465·616d·7320·6174·2074·6865·2052··t·teams·at·the·R
000110c0:·6f79·616c·2049·6e73·7469·7475·7465·206f··oyal·Institute·o000110c0:·6f79·616c·2049·6e73·7469·7475·7465·206f··oyal·Institute·o
000110d0:·6620·5465·6368·6e6f·6c6f·6779·2061·6e64··f·Technology·and000110d0:·6620·5465·6368·6e6f·6c6f·6779·2061·6e64··f·Technology·and
000110e0:·0a55·7070·7361·6c61·2055·6e69·7665·7273··.Uppsala·Univers000110e0:·0a55·7070·7361·6c61·2055·6e69·7665·7273··.Uppsala·Univers
⊟
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Offset 442, 15 lines modifiedOffset 442, 15 lines modified
442 Pieter·Meulenhoff,·Teemu·Murtola,·Sander·Pronk,·Michael·Shirts,·Alfons·Sijbers,442 Pieter·Meulenhoff,·Teemu·Murtola,·Sander·Pronk,·Michael·Shirts,·Alfons·Sijbers,
443 Balint·Soproni,·David·van·der·Spoel,·Peter·Tieleman,·Carsten·Uphoff,·Jon443 Balint·Soproni,·David·van·der·Spoel,·Peter·Tieleman,·Carsten·Uphoff,·Jon
444 Vincent,·Teemu·Virolainen,·Christian·Wennberg,·Maarten·Wolf,·Artem·Zhmurov444 Vincent,·Teemu·Virolainen,·Christian·Wennberg,·Maarten·Wolf,·Artem·Zhmurov
445 Project·leaders:·Berk·Hess,·Erik·Lindahl445 Project·leaders:·Berk·Hess,·Erik·Lindahl
446 ©·1991·–·2000:446 ©·1991·–·2000:
447 ·····Department·of·Biophysical·Chemistry,·University·of·Groningen.447 ·····Department·of·Biophysical·Chemistry,·University·of·Groningen.
448 ·····Nijenborgh·4,·9747·AG·Groningen,·The·Netherlands.448 ·····Nijenborgh·4,·9747·AG·Groningen,·The·Netherlands.
449 ©·2001·–·2026:449 ©·2001·–·2024:
450 ·····The·GROMACS·development·teams·at·the·Royal·Institute·of·Technology450 ·····The·GROMACS·development·teams·at·the·Royal·Institute·of·Technology
451 ·····and·Uppsala·University,·Sweden.451 ·····and·Uppsala·University,·Sweden.
452 This·manual·is·not·complete·and·has·no·pretension·to·be·so·due·to·lack·of·time452 This·manual·is·not·complete·and·has·no·pretension·to·be·so·due·to·lack·of·time
453 of·the·contributors·–·our·first·priority·is·to·improve·the·software.·It·is453 of·the·contributors·–·our·first·priority·is·to·improve·the·software.·It·is
454 worked·on·continuously,·which·in·some·cases·might·mean·the·information·is·not454 worked·on·continuously,·which·in·some·cases·might·mean·the·information·is·not
455 entirely·correct.455 entirely·correct.
456 Comments·on·form·and·content·are·welcome,·please·send·them·to·the·_\x8u_\x8s_\x8e_\x8r456 Comments·on·form·and·content·are·welcome,·please·send·them·to·the·_\x8u_\x8s_\x8e_\x8r
⊟
4.16 KB
./usr/share/doc/gromacs/html/searchindex.js
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4.07 KB
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Offset 10871, 15 lines modifiedOffset 10871, 15 lines modified
10871 ········"2019":·[31,·39,·194,·205,·238,·239,·240,·241,·258,·264,·265,·266,·267,·268,·281,·293,·357],10871 ········"2019":·[31,·39,·194,·205,·238,·239,·240,·241,·258,·264,·265,·266,·267,·268,·281,·293,·357],
10872 ········"2020":·[4,·11,·15,·17,·29,·39,·194,·254,·274,·280,·281,·282,·283,·284,·285,·286,·310,·334,·357],10872 ········"2020":·[4,·11,·15,·17,·29,·39,·194,·254,·274,·280,·281,·282,·283,·284,·285,·286,·310,·334,·357],
10873 ········"2021":·[39,·194,·265,·268,·269,·290,·296,·297,·298,·299,·300,·301,·310,·325,·357],10873 ········"2021":·[39,·194,·265,·268,·269,·290,·296,·297,·298,·299,·300,·301,·310,·325,·357],
10874 ········"2022":·[0,·17,·28,·29,·39,·270,·284,·285,·306,·312,·313,·314,·315,·316,·317,·326,·357],10874 ········"2022":·[0,·17,·28,·29,·39,·270,·284,·285,·306,·312,·313,·314,·315,·316,·317,·326,·357],
10875 ········"2023":·[38,·39,·123,·194,·286,·300,·301,·322,·328,·329,·330,·331,·357],10875 ········"2023":·[38,·39,·123,·194,·286,·300,·301,·322,·328,·329,·330,·331,·357],
10876 ········"2024":·[0,·1,·2,·3,·4,·5,·6,·7,·8,·9,·10,·11,·12,·13,·14,·15,·16,·17,·18,·19,·20,·21,·22,·23,·24,·25,·26,·27,·28,·29,·30,·31,·32,·33,·34,·35,·36,·37,·38,·39,·40,·41,·42,·43,·44,·45,·46,·47,·48,·49,·50,·51,·52,·53,·54,·55,·56,·57,·58,·59,·60,·61,·62,·63,·64,·65,·66,·67,·68,·69,·70,·71,·72,·73,·74,·75,·76,·77,·78,·79,·80,·81,·82,·83,·84,·85,·86,·87,·88,·89,·90,·91,·92,·93,·94,·95,·96,·97,·98,·99,·100,·101,·102,·103,·104,·105,·106,·107,·108,·109,·110,·111,·112,·113,·114,·115,·116,·117,·118,·119,·120,·121,·122,·123,·124,·125,·126,·127,·128,·129,·130,·131,·132,·133,·134,·135,·136,·137,·138,·139,·140,·141,·142,·143,·144,·145,·146,·147,·148,·149,·150,·151,·152,·153,·154,·155,·156,·157,·158,·159,·160,·161,·162,·163,·164,·165,·166,·167,·168,·169,·170,·171,·172,·173,·174,·175,·176,·177,·178,·179,·180,·181,·182,·183,·184,·185,·186,·187,·188,·189,·190,·191,·192,·193,·194,·195,·196,·197,·198,·199,·200,·201,·202,·203,·204,·205,·206,·207,·208,·209,·210,·211,·212,·213,·214,·215,·216,·217,·218,·219,·220,·221,·222,·223,·224,·225,·226,·227,·228,·229,·230,·231,·232,·233,·234,·235,·236,·237,·238,·239,·240,·241,·242,·243,·244,·245,·246,·247,·248,·249,·250,·251,·252,·253,·254,·255,·256,·257,·258,·259,·260,·261,·262,·263,·264,·265,·266,·267,·268,·269,·270,·271,·272,·273,·274,·275,·276,·277,·278,·279,·280,·281,·282,·283,·284,·285,·286,·287,·288,·289,·290,·291,·292,·293,·294,·295,·296,·297,·298,·299,·300,·301,·302,·303,·304,·305,·306,·307,·308,·309,·310,·311,·312,·313,·314,·315,·316,·317,·318,·319,·320,·321,·322,·323,·324,·325,·326,·327,·332,·333,·335,·336,·337,·338,·339,·340,·341,·343,·344,·345,·346,·347,·348,·349,·350,·351,·352,·353,·354,·355,·356,·357,·358,·359,·360,·361],10876 ········"2024":·[0,·1,·2,·3,·4,·5,·6,·7,·8,·9,·10,·11,·12,·13,·14,·15,·16,·17,·18,·19,·20,·21,·22,·23,·24,·25,·26,·27,·28,·29,·30,·31,·32,·33,·34,·35,·36,·37,·38,·39,·40,·41,·42,·43,·44,·45,·46,·47,·48,·49,·50,·51,·52,·53,·54,·55,·56,·57,·58,·59,·60,·61,·62,·63,·64,·65,·66,·67,·68,·69,·70,·71,·72,·73,·74,·75,·76,·77,·78,·79,·80,·81,·82,·83,·84,·85,·86,·87,·88,·89,·90,·91,·92,·93,·94,·95,·96,·97,·98,·99,·100,·101,·102,·103,·104,·105,·106,·107,·108,·109,·110,·111,·112,·113,·114,·115,·116,·117,·118,·119,·120,·121,·122,·123,·124,·125,·126,·127,·128,·129,·130,·131,·132,·133,·134,·135,·136,·137,·138,·139,·140,·141,·142,·143,·144,·145,·146,·147,·148,·149,·150,·151,·152,·153,·154,·155,·156,·157,·158,·159,·160,·161,·162,·163,·164,·165,·166,·167,·168,·169,·170,·171,·172,·173,·174,·175,·176,·177,·178,·179,·180,·181,·182,·183,·184,·185,·186,·187,·188,·189,·190,·191,·192,·193,·194,·195,·196,·197,·198,·199,·200,·201,·202,·203,·204,·205,·206,·207,·208,·209,·210,·211,·212,·213,·214,·215,·216,·217,·218,·219,·220,·221,·222,·223,·224,·225,·226,·227,·228,·229,·230,·231,·232,·233,·234,·235,·236,·237,·238,·239,·240,·241,·242,·243,·244,·245,·246,·247,·248,·249,·250,·251,·252,·253,·254,·255,·256,·257,·258,·259,·260,·261,·262,·263,·264,·265,·266,·267,·268,·269,·270,·271,·272,·273,·274,·275,·276,·277,·278,·279,·280,·281,·282,·283,·284,·285,·286,·287,·288,·289,·290,·291,·292,·293,·294,·295,·296,·297,·298,·299,·300,·301,·302,·303,·304,·305,·306,·307,·308,·309,·310,·311,·312,·313,·314,·315,·316,·317,·318,·319,·320,·321,·322,·323,·324,·325,·326,·327,·332,·333,·335,·336,·337,·338,·339,·340,·341,·343,·344,·345,·346,·347,·348,·349,·350,·351,·352,·353,·354,·355,·356,·357,·358,·359,·360,·361],
10877 ········"2025":·[222,·342],10877 ········"2025":·[222,·342],
10878 ········"2026":·[0,·1,·2,·3,·4,·5,·6,·7,·8,·9,·10,·11,·12,·13,·14,·15,·16,·17,·18,·19,·20,·21,·22,·23,·24,·25,·26,·27,·28,·29,·30,·31,·32,·33,·34,·35,·36,·37,·38,·39,·40,·41,·42,·43,·44,·45,·46,·47,·48,·49,·50,·51,·52,·53,·54,·55,·56,·57,·58,·59,·60,·61,·62,·63,·64,·65,·6[·...·truncated·by·diffoscope;·len:·1444,·SHA:·444eaffcaeaf395c7129df8a68a038146dc491c7656e03ee14928d1164a3c8aa·...·],10878 ········"2026":·248,
10879 ········"2027":·248,10879 ········"2027":·248,
10880 ········"2028":·248,10880 ········"2028":·248,
10881 ········"2029":·222,10881 ········"2029":·222,
10882 ········"2031":·241,10882 ········"2031":·241,
10883 ········"2032":·[50,·194,·241],10883 ········"2032":·[50,·194,·241],
10884 ········"2033":·222,10884 ········"2033":·222,
10885 ········"2037":·[222,·238,·249],10885 ········"2037":·[222,·238,·249],
Generated by diffoscope 283