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/srv/reproducible-results/rbuild-debian/tmp.PdQ1SPkZCa/b1/gmap_2020-04-08+ds1-2_amd64.changes vs.
/srv/reproducible-results/rbuild-debian/tmp.PdQ1SPkZCa/b2/gmap_2020-04-08+ds1-2_amd64.changes
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1 ·2570048417e107e0f88266adaaa9ae1d·13083400·debug·optional·gmap-dbgsym_2020-04-08+ds1-2_amd64.deb1 ·2570048417e107e0f88266adaaa9ae1d·13083400·debug·optional·gmap-dbgsym_2020-04-08+ds1-2_amd64.deb
2 ·ee0ba9b096ce9d0dfa8a34ddd77c799a·11352984·science·optional·gmap_2020-04-08+ds1-2_amd64.deb2 ·54a4dc31e34b5cddfb1e4c97b99278b5·11353748·science·optional·gmap_2020-04-08+ds1-2_amd64.deb
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gmap_2020-04-08+ds1-2_amd64.deb
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1 -rw-r--r--···0········0········0········4·2020-04-18·18:38:39.000000·debian-binary1 -rw-r--r--···0········0········0········4·2020-04-18·18:38:39.000000·debian-binary
2 -rw-r--r--···0········0········0·····2168·2020-04-18·18:38:39.000000·control.tar.xz2 -rw-r--r--···0········0········0·····2168·2020-04-18·18:38:39.000000·control.tar.xz
3 -rw-r--r--···0········0········0·11350624·2020-04-18·18:38:39.000000·data.tar.xz3 -rw-r--r--···0········0········0·11351388·2020-04-18·18:38:39.000000·data.tar.xz
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control.tar.xz
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control.tar
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./control
    
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1 Package:·gmap1 Package:·gmap
2 Version:·2020-04-08+ds1-22 Version:·2020-04-08+ds1-2
3 Architecture:·amd643 Architecture:·amd64
4 Maintainer:·Debian·Med·Packaging·Team·<debian-med-packaging@lists.alioth.debian.org>4 Maintainer:·Debian·Med·Packaging·Team·<debian-med-packaging@lists.alioth.debian.org>
5 Installed-Size:·861585 Installed-Size:·86159
6 Depends:·perl:any,·libbz2-1.0,·libc6·(>=·2.29),·zlib1g·(>=·1:1.2.6)6 Depends:·perl:any,·libbz2-1.0,·libc6·(>=·2.29),·zlib1g·(>=·1:1.2.6)
7 Section:·science7 Section:·science
8 Priority:·optional8 Priority:·optional
9 Homepage:·http://research-pub.gene.com/gmap9 Homepage:·http://research-pub.gene.com/gmap
10 Description:·spliced·and·SNP-tolerant·alignment·for·mRNA·and·short·reads10 Description:·spliced·and·SNP-tolerant·alignment·for·mRNA·and·short·reads
11 ·This·package·contains·the·programs·GMAP·and·GSNAP·as·well·as11 ·This·package·contains·the·programs·GMAP·and·GSNAP·as·well·as
12 ·utilities·to·manage·genome·databases·in·GMAP/GSNAP·format.12 ·utilities·to·manage·genome·databases·in·GMAP/GSNAP·format.
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./md5sums
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./md5sums
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data.tar.xz
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data.tar
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50 -rw-r--r--···0·root·········(0)·root·········(0)·····3525·2020-03-12·19:33:44.000000·./usr/share/doc/gmap/NOTICE50 -rw-r--r--···0·root·········(0)·root·········(0)·····3525·2020-03-12·19:33:44.000000·./usr/share/doc/gmap/NOTICE
51 -rw-r--r--···0·root·········(0)·root·········(0)······171·2020-04-18·18:38:39.000000·./usr/share/doc/gmap/README.Debian51 -rw-r--r--···0·root·········(0)·root·········(0)······171·2020-04-18·18:38:39.000000·./usr/share/doc/gmap/README.Debian
52 -rw-r--r--···0·root·········(0)·root·········(0)····19636·2020-03-12·19:33:54.000000·./usr/share/doc/gmap/README.gz52 -rw-r--r--···0·root·········(0)·root·········(0)····19636·2020-03-12·19:33:54.000000·./usr/share/doc/gmap/README.gz
53 -rw-r--r--···0·root·········(0)·root·········(0)·····4217·2020-04-18·18:38:39.000000·./usr/share/doc/gmap/changelog.Debian.gz53 -rw-r--r--···0·root·········(0)·root·········(0)·····4217·2020-04-18·18:38:39.000000·./usr/share/doc/gmap/changelog.Debian.gz
54 -rw-r--r--···0·root·········(0)·root·········(0)···256570·2020-04-10·14:11:28.000000·./usr/share/doc/gmap/changelog.gz54 -rw-r--r--···0·root·········(0)·root·········(0)···256570·2020-04-10·14:11:28.000000·./usr/share/doc/gmap/changelog.gz
55 -rw-r--r--···0·root·········(0)·root·········(0)·····4173·2020-04-18·18:38:39.000000·./usr/share/doc/gmap/copyright55 -rw-r--r--···0·root·········(0)·root·········(0)·····4173·2020-04-18·18:38:39.000000·./usr/share/doc/gmap/copyright
56 drwxr-xr-x···0·root·········(0)·root·········(0)········0·2020-04-18·18:38:39.000000·./usr/share/doc/gmap/examples/56 drwxr-xr-x···0·root·········(0)·root·········(0)········0·2020-04-18·18:38:39.000000·./usr/share/doc/gmap/examples/
57 -rw-r--r--···0·root·········(0)·root·········(0)···285148·2020-04-18·18:38:39.000000·./usr/share/doc/gmap/examples/tests.tar.xz57 -rw-r--r--···0·root·········(0)·root·········(0)···285880·2020-04-18·18:38:39.000000·./usr/share/doc/gmap/examples/tests.tar.xz
58 drwxr-xr-x···0·root·········(0)·root·········(0)········0·2020-04-18·18:38:39.000000·./usr/share/lintian/58 drwxr-xr-x···0·root·········(0)·root·········(0)········0·2020-04-18·18:38:39.000000·./usr/share/lintian/
59 drwxr-xr-x···0·root·········(0)·root·········(0)········0·2020-04-18·18:38:39.000000·./usr/share/lintian/overrides/59 drwxr-xr-x···0·root·········(0)·root·········(0)········0·2020-04-18·18:38:39.000000·./usr/share/lintian/overrides/
60 -rw-r--r--···0·root·········(0)·root·········(0)·······57·2020-04-18·18:38:39.000000·./usr/share/lintian/overrides/gmap60 -rw-r--r--···0·root·········(0)·root·········(0)·······57·2020-04-18·18:38:39.000000·./usr/share/lintian/overrides/gmap
61 drwxr-xr-x···0·root·········(0)·root·········(0)········0·2020-04-18·18:38:39.000000·./usr/share/man/61 drwxr-xr-x···0·root·········(0)·root·········(0)········0·2020-04-18·18:38:39.000000·./usr/share/man/
62 drwxr-xr-x···0·root·········(0)·root·········(0)········0·2020-04-18·18:38:39.000000·./usr/share/man/man1/62 drwxr-xr-x···0·root·········(0)·root·········(0)········0·2020-04-18·18:38:39.000000·./usr/share/man/man1/
63 -rw-r--r--···0·root·········(0)·root·········(0)·····5611·2020-04-18·18:38:39.000000·./usr/share/man/man1/gmap.1.gz63 -rw-r--r--···0·root·········(0)·root·········(0)·····5611·2020-04-18·18:38:39.000000·./usr/share/man/man1/gmap.1.gz
64 -rw-r--r--···0·root·········(0)·root·········(0)·····1720·2020-04-18·18:38:39.000000·./usr/share/man/man1/gmap_build.1.gz64 -rw-r--r--···0·root·········(0)·root·········(0)·····1720·2020-04-18·18:38:39.000000·./usr/share/man/man1/gmap_build.1.gz
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./usr/share/doc/gmap/examples/tests.tar.xz
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tests.tar
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1 drwxr-xr-x···0········0········0········0·2020-04-18·18:38:39.000000·tests/1 drwxr-xr-x···0········0········0········0·2020-04-18·18:38:39.000000·tests/
2 -rw-r--r--···0········0········0····29029·2020-04-18·18:38:39.000000·tests/Makefile2 -rw-r--r--···0········0········0····29047·2020-04-18·18:38:39.000000·tests/Makefile
3 -rw-r--r--···0········0········0·····1319·2020-04-18·18:38:39.000000·tests/Makefile.am3 -rw-r--r--···0········0········0·····1319·2020-04-18·18:38:39.000000·tests/Makefile.am
4 -rw-r--r--···0········0········0····29193·2020-04-18·18:38:39.000000·tests/Makefile.in4 -rw-r--r--···0········0········0····29193·2020-04-18·18:38:39.000000·tests/Makefile.in
5 -rw-r--r--···0········0········0······560·2020-04-18·18:38:39.000000·tests/align.log5 -rw-r--r--···0········0········0······559·2020-04-18·18:38:39.000000·tests/align.log
6 -rwxr-xr-x···0········0········0······206·2020-04-18·18:38:39.000000·tests/align.test6 -rwxr-xr-x···0········0········0······206·2020-04-18·18:38:39.000000·tests/align.test
7 -rw-r--r--···0········0········0······206·2020-04-18·18:38:39.000000·tests/align.test.in7 -rw-r--r--···0········0········0······206·2020-04-18·18:38:39.000000·tests/align.test.in
8 -rw-r--r--···0········0········0····40750·2020-04-18·18:38:39.000000·tests/align.test.ok8 -rw-r--r--···0········0········0····40750·2020-04-18·18:38:39.000000·tests/align.test.ok
9 -rw-r--r--···0········0········0·······82·2020-04-18·18:38:39.000000·tests/align.trs9 -rw-r--r--···0········0········0·······82·2020-04-18·18:38:39.000000·tests/align.trs
10 -rw-r--r--···0········0········0······316·2020-04-18·18:38:39.000000·tests/coords1.log10 -rw-r--r--···0········0········0······316·2020-04-18·18:38:39.000000·tests/coords1.log
11 -rwxr-xr-x···0········0········0······194·2020-04-18·18:38:39.000000·tests/coords1.test11 -rwxr-xr-x···0········0········0······194·2020-04-18·18:38:39.000000·tests/coords1.test
12 -rw-r--r--···0········0········0······194·2020-04-18·18:38:39.000000·tests/coords1.test.in12 -rw-r--r--···0········0········0······194·2020-04-18·18:38:39.000000·tests/coords1.test.in
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368 DEPDIR·=·.deps368 DEPDIR·=·.deps
369 DLLTOOL·=·false369 DLLTOOL·=·false
370 DSYMUTIL·=·370 DSYMUTIL·=·
371 DUMPBIN·=·371 DUMPBIN·=·
372 ECHO_C·=·372 ECHO_C·=·
373 ECHO_N·=·-n373 ECHO_N·=·-n
374 ECHO_T·=·374 ECHO_T·=·
375 EGREP·=·/bin/grep·-E375 EGREP·=·/usr/bin/grep·-E
376 EXEEXT·=·376 EXEEXT·=·
377 FGREP·=·/bin/grep·-F377 FGREP·=·/usr/bin/grep·-F
378 GMAPDB·=·/var/cache/gmap378 GMAPDB·=·/var/cache/gmap
379 GREP·=·/bin/grep379 GREP·=·/usr/bin/grep
380 HAVE_INLINE·=·380 HAVE_INLINE·=·
381 INSTALL·=·/usr/bin/install·-c381 INSTALL·=·/usr/bin/install·-c
382 INSTALL_DATA·=·${INSTALL}·-m·644382 INSTALL_DATA·=·${INSTALL}·-m·644
383 INSTALL_PROGRAM·=·${INSTALL}383 INSTALL_PROGRAM·=·${INSTALL}
384 INSTALL_SCRIPT·=·${INSTALL}384 INSTALL_SCRIPT·=·${INSTALL}
385 INSTALL_STRIP_PROGRAM·=·$(install_sh)·-c·-s385 INSTALL_STRIP_PROGRAM·=·$(install_sh)·-c·-s
386 LD·=·/usr/bin/ld·-m·elf_x86_64386 LD·=·/usr/bin/ld·-m·elf_x86_64
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393 LN_S·=·ln·-s393 LN_S·=·ln·-s
394 LTLIBOBJS·=·394 LTLIBOBJS·=·
395 LT_SYS_LIBRARY_PATH·=·395 LT_SYS_LIBRARY_PATH·=·
396 MAINT·=·#396 MAINT·=·#
397 MAKEINFO·=·${SHELL}·«buildpath»/config/missing·makeinfo397 MAKEINFO·=·${SHELL}·«buildpath»/config/missing·makeinfo
398 MANIFEST_TOOL·=·:398 MANIFEST_TOOL·=·:
399 MAX_STACK_READLENGTH·=·300399 MAX_STACK_READLENGTH·=·300
400 MKDIR_P·=·/bin/mkdir·-p400 MKDIR_P·=·/usr/bin/mkdir·-p
401 NM·=·/usr/bin/nm·-B401 NM·=·/usr/bin/nm·-B
402 NMEDIT·=·402 NMEDIT·=·
403 OBJDUMP·=·objdump403 OBJDUMP·=·objdump
404 OBJEXT·=·o404 OBJEXT·=·o
405 OTOOL·=·405 OTOOL·=·
406 OTOOL64·=·406 OTOOL64·=·
407 PACKAGE·=·gmap407 PACKAGE·=·gmap
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414 PATH_SEPARATOR·=·:414 PATH_SEPARATOR·=·:
415 PERL·=·/usr/bin/perl415 PERL·=·/usr/bin/perl
416 POPCNT_CFLAGS·=·-mpopcnt416 POPCNT_CFLAGS·=·-mpopcnt
417 PTHREAD_CC·=·gcc417 PTHREAD_CC·=·gcc
418 PTHREAD_CFLAGS·=·-pthread418 PTHREAD_CFLAGS·=·-pthread
419 PTHREAD_LIBS·=·419 PTHREAD_LIBS·=·
420 RANLIB·=·ranlib420 RANLIB·=·ranlib
421 SED·=·/bin/sed421 SED·=·/usr/bin/sed
422 SET_MAKE·=·422 SET_MAKE·=·
423 SHELL·=·/bin/bash423 SHELL·=·/bin/sh
424 SIMD_AVX2_CFLAGS·=·424 SIMD_AVX2_CFLAGS·=·
425 SIMD_AVX512_CFLAGS·=·425 SIMD_AVX512_CFLAGS·=·
426 SIMD_SSE2_CFLAGS·=·-msse2·-mno-ssse3·-mno-sse4.1·-mno-sse4.2426 SIMD_SSE2_CFLAGS·=·-msse2·-mno-ssse3·-mno-sse4.1·-mno-sse4.2
427 SIMD_SSE4_1_CFLAGS·=·-msse2·-mssse3·-msse4.1·-mno-sse4.2427 SIMD_SSE4_1_CFLAGS·=·-msse2·-mssse3·-msse4.1·-mno-sse4.2
428 SIMD_SSE4_2_CFLAGS·=·-msse2·-mssse3·-msse4.1·-msse4.2428 SIMD_SSE4_2_CFLAGS·=·-msse2·-mssse3·-msse4.1·-msse4.2
429 SIMD_SSSE3_CFLAGS·=·-msse2·-mssse3·-mno-sse4.1·-mno-sse4.2429 SIMD_SSSE3_CFLAGS·=·-msse2·-mssse3·-mno-sse4.1·-mno-sse4.2
430 STRIP·=·strip430 STRIP·=·strip
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tests/align.log
    
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1 GMAP·version·2020-04-08·called·with·args:·«buildpath»/src/gmap.sse42·-A·-g·«buildpath»/tests/ss.chr17test·«buildpath»/tests/ss.her21 GMAP·version·2020-04-08·called·with·args:·«buildpath»/src/gmap.sse42·-A·-g·«buildpath»/tests/ss.chr17test·«buildpath»/tests/ss.her2
2 Checking·compiler·assumptions·for·SSE2:·6B8B4567·327B23C6·xor=59F066A12 Checking·compiler·assumptions·for·SSE2:·6B8B4567·327B23C6·xor=59F066A1
3 Checking·compiler·assumptions·for·SSE4.1:·-103·-58·max=198·=>·compiler·zero·extends3 Checking·compiler·assumptions·for·SSE4.1:·-103·-58·max=198·=>·compiler·zero·extends
4 Checking·compiler·options·for·SSE4.2:·6B8B4567·__builtin_clz=1·__builtin_ctz=0·_mm_popcnt_u32=17·__builtin_popcount=17·4 Checking·compiler·options·for·SSE4.2:·6B8B4567·__builtin_clz=1·__builtin_ctz=0·_mm_popcnt_u32=17·__builtin_popcount=17·
5 Finished·checking·compiler·assumptions5 Finished·checking·compiler·assumptions
6 Starting·alignment6 Starting·alignment
7 Processed·1·queries·in·0.03·seconds·(33.33·queries/sec)7 Processed·1·queries·in·0.15·seconds·(6.67·queries/sec)
8 PASS·align.test·(exit·status:·0)8 PASS·align.test·(exit·status:·0)