⊟
51.3 MB
/srv/reproducible-results/rbuild-debian/r-b-build.YDV0NFZm/b1/biojava6-live_6.1.0+dfsg-4_amd64.changes vs.
/srv/reproducible-results/rbuild-debian/r-b-build.YDV0NFZm/b2/biojava6-live_6.1.0+dfsg-4_amd64.changes
⊟
319 B
Files
    
Offset 1, 3 lines modifiedOffset 1, 3 lines modified
  
1 ·566dd00f8d83cdaaa45c649527e183a5·2241524·doc·optional·libbiojava6-java-doc_6.1.0+dfsg-4_all.deb1 ·2b94b648c6bc48e5e7e10ae3f60735c6·2241556·doc·optional·libbiojava6-java-doc_6.1.0+dfsg-4_all.deb
2 ·32d69557b428ca9cd629aaad55529de2·5366168·java·optional·libbiojava6-java_6.1.0+dfsg-4_all.deb2 ·32d69557b428ca9cd629aaad55529de2·5366168·java·optional·libbiojava6-java_6.1.0+dfsg-4_all.deb
⊟
51.3 MB
libbiojava6-java-doc_6.1.0+dfsg-4_all.deb
⊟
452 B
file list
    
Offset 1, 3 lines modifiedOffset 1, 3 lines modified
1 -rw-r--r--···0········0········0········4·2023-02-07·09:14:19.000000·debian-binary1 -rw-r--r--···0········0········0········4·2023-02-07·09:14:19.000000·debian-binary
2 -rw-r--r--···0········0········0····87716·2023-02-07·09:14:19.000000·control.tar.xz2 -rw-r--r--···0········0········0····87724·2023-02-07·09:14:19.000000·control.tar.xz
3 -rw-r--r--···0········0········0··2153616·2023-02-07·09:14:19.000000·data.tar.xz3 -rw-r--r--···0········0········0··2153640·2023-02-07·09:14:19.000000·data.tar.xz
⊟
98.0 B
control.tar.xz
⊟
70.0 B
control.tar
⊟
48.0 B
./md5sums
⊟
30.0 B
./md5sums
Files differ
⊟
51.3 MB
data.tar.xz
⊟
51.3 MB
data.tar
⊟
3.55 KB
file list
    
Offset 115, 22 lines modifiedOffset 115, 22 lines modified
115 -rw-r--r--···0·root·········(0)·root·········(0)·····2696·2023-02-07·09:14:19.000000·./usr/share/doc/libbiojava6-java/apidocs/demo/class-use/WebStartClientDemo.html115 -rw-r--r--···0·root·········(0)·root·········(0)·····2696·2023-02-07·09:14:19.000000·./usr/share/doc/libbiojava6-java/apidocs/demo/class-use/WebStartClientDemo.html
116 -rw-r--r--···0·root·········(0)·root·········(0)····18916·2023-02-07·09:14:19.000000·./usr/share/doc/libbiojava6-java/apidocs/demo/package-summary.html116 -rw-r--r--···0·root·········(0)·root·········(0)····18916·2023-02-07·09:14:19.000000·./usr/share/doc/libbiojava6-java/apidocs/demo/package-summary.html
117 -rw-r--r--···0·root·········(0)·root·········(0)·····9465·2023-02-07·09:14:19.000000·./usr/share/doc/libbiojava6-java/apidocs/demo/package-tree.html117 -rw-r--r--···0·root·········(0)·root·········(0)·····9465·2023-02-07·09:14:19.000000·./usr/share/doc/libbiojava6-java/apidocs/demo/package-tree.html
118 -rw-r--r--···0·root·········(0)·root·········(0)·····2501·2023-02-07·09:14:19.000000·./usr/share/doc/libbiojava6-java/apidocs/demo/package-use.html118 -rw-r--r--···0·root·········(0)·root·········(0)·····2501·2023-02-07·09:14:19.000000·./usr/share/doc/libbiojava6-java/apidocs/demo/package-use.html
119 -rw-r--r--···0·root·········(0)·root·········(0)·····9798·2023-02-07·09:14:19.000000·./usr/share/doc/libbiojava6-java/apidocs/deprecated-list.html119 -rw-r--r--···0·root·········(0)·root·········(0)·····9798·2023-02-07·09:14:19.000000·./usr/share/doc/libbiojava6-java/apidocs/deprecated-list.html
120 -rw-r--r--···0·root·········(0)·root·········(0)······970·2023-02-07·09:14:19.000000·./usr/share/doc/libbiojava6-java/apidocs/element-list.gz120 -rw-r--r--···0·root·········(0)·root·········(0)······970·2023-02-07·09:14:19.000000·./usr/share/doc/libbiojava6-java/apidocs/element-list.gz
121 -rw-r--r--···0·root·········(0)·root·········(0)····10503·2023-02-07·09:14:19.000000·./usr/share/doc/libbiojava6-java/apidocs/help-doc.html121 -rw-r--r--···0·root·········(0)·root·········(0)····10503·2023-02-07·09:14:19.000000·./usr/share/doc/libbiojava6-java/apidocs/help-doc.html
122 -rw-r--r--···0·root·········(0)·root·········(0)··6508336·2023-02-07·09:14:19.000000·./usr/share/doc/libbiojava6-java/apidocs/index-all.html122 -rw-r--r--···0·root·········(0)·root·········(0)··6508300·2023-02-07·09:14:19.000000·./usr/share/doc/libbiojava6-java/apidocs/index-all.html
123 -rw-r--r--···0·root·········(0)·root·········(0)····51376·2023-02-07·09:14:19.000000·./usr/share/doc/libbiojava6-java/apidocs/index.html123 -rw-r--r--···0·root·········(0)·root·········(0)····51376·2023-02-07·09:14:19.000000·./usr/share/doc/libbiojava6-java/apidocs/index.html
124 -rw-r--r--···0·root·········(0)·root·········(0)·····1498·2023-02-07·09:14:19.000000·./usr/share/doc/libbiojava6-java/apidocs/jquery-ui.overrides.css124 -rw-r--r--···0·root·········(0)·root·········(0)·····1498·2023-02-07·09:14:19.000000·./usr/share/doc/libbiojava6-java/apidocs/jquery-ui.overrides.css
125 drwxr-xr-x···0·root·········(0)·root·········(0)········0·2023-02-07·09:14:19.000000·./usr/share/doc/libbiojava6-java/apidocs/legal/125 drwxr-xr-x···0·root·········(0)·root·········(0)········0·2023-02-07·09:14:19.000000·./usr/share/doc/libbiojava6-java/apidocs/legal/
126 -rw-r--r--···0·root·········(0)·root·········(0)·····1522·2023-02-07·09:14:19.000000·./usr/share/doc/libbiojava6-java/apidocs/legal/ASSEMBLY_EXCEPTION126 -rw-r--r--···0·root·········(0)·root·········(0)·····1522·2023-02-07·09:14:19.000000·./usr/share/doc/libbiojava6-java/apidocs/legal/ASSEMBLY_EXCEPTION
127 -rw-r--r--···0·root·········(0)·root·········(0)·····2936·2023-02-07·09:14:19.000000·./usr/share/doc/libbiojava6-java/apidocs/legal/jquery.md127 -rw-r--r--···0·root·········(0)·root·········(0)·····2936·2023-02-07·09:14:19.000000·./usr/share/doc/libbiojava6-java/apidocs/legal/jquery.md
128 -rw-r--r--···0·root·········(0)·root·········(0)·····1870·2023-02-07·09:14:19.000000·./usr/share/doc/libbiojava6-java/apidocs/legal/jqueryUI.md128 -rw-r--r--···0·root·········(0)·root·········(0)·····1870·2023-02-07·09:14:19.000000·./usr/share/doc/libbiojava6-java/apidocs/legal/jqueryUI.md
129 -rw-r--r--···0·root·········(0)·root·········(0)··1761432·2023-02-07·09:14:19.000000·./usr/share/doc/libbiojava6-java/apidocs/member-search-index.js129 -rw-r--r--···0·root·········(0)·root·········(0)··1761420·2023-02-07·09:14:19.000000·./usr/share/doc/libbiojava6-java/apidocs/member-search-index.js
130 -rw-r--r--···0·root·········(0)·root·········(0)·······45·2023-02-07·09:14:19.000000·./usr/share/doc/libbiojava6-java/apidocs/module-search-index.js130 -rw-r--r--···0·root·········(0)·root·········(0)·······45·2023-02-07·09:14:19.000000·./usr/share/doc/libbiojava6-java/apidocs/module-search-index.js
131 drwxr-xr-x···0·root·········(0)·root·········(0)········0·2023-02-07·09:14:19.000000·./usr/share/doc/libbiojava6-java/apidocs/org/131 drwxr-xr-x···0·root·········(0)·root·········(0)········0·2023-02-07·09:14:19.000000·./usr/share/doc/libbiojava6-java/apidocs/org/
132 drwxr-xr-x···0·root·········(0)·root·········(0)········0·2023-02-07·09:14:19.000000·./usr/share/doc/libbiojava6-java/apidocs/org/biojava/132 drwxr-xr-x···0·root·········(0)·root·········(0)········0·2023-02-07·09:14:19.000000·./usr/share/doc/libbiojava6-java/apidocs/org/biojava/
133 drwxr-xr-x···0·root·········(0)·root·········(0)········0·2023-02-07·09:14:19.000000·./usr/share/doc/libbiojava6-java/apidocs/org/biojava/nbio/133 drwxr-xr-x···0·root·········(0)·root·········(0)········0·2023-02-07·09:14:19.000000·./usr/share/doc/libbiojava6-java/apidocs/org/biojava/nbio/
134 drwxr-xr-x···0·root·········(0)·root·········(0)········0·2023-02-07·09:14:19.000000·./usr/share/doc/libbiojava6-java/apidocs/org/biojava/nbio/aaproperties/134 drwxr-xr-x···0·root·········(0)·root·········(0)········0·2023-02-07·09:14:19.000000·./usr/share/doc/libbiojava6-java/apidocs/org/biojava/nbio/aaproperties/
135 -rw-r--r--···0·root·········(0)·root·········(0)····14698·2023-02-07·09:14:19.000000·./usr/share/doc/libbiojava6-java/apidocs/org/biojava/nbio/aaproperties/AminoAcidProperties.html135 -rw-r--r--···0·root·········(0)·root·········(0)····14698·2023-02-07·09:14:19.000000·./usr/share/doc/libbiojava6-java/apidocs/org/biojava/nbio/aaproperties/AminoAcidProperties.html
136 -rw-r--r--···0·root·········(0)·root·········(0)····32816·2023-02-07·09:14:19.000000·./usr/share/doc/libbiojava6-java/apidocs/org/biojava/nbio/aaproperties/CommandPrompt.PropertyName.html136 -rw-r--r--···0·root·········(0)·root·········(0)····32816·2023-02-07·09:14:19.000000·./usr/share/doc/libbiojava6-java/apidocs/org/biojava/nbio/aaproperties/CommandPrompt.PropertyName.html
⊟
51.3 MB
./usr/share/doc/libbiojava6-java/apidocs/index-all.html
    
Offset 16752, 390020 lines modifiedOffset 16752, 390018 lines modified
000416f0:·2e68·746d·6c22·2074·6974·6c65·3d22·636c··.html"·title="cl000416f0:·2e68·746d·6c22·2074·6974·6c65·3d22·636c··.html"·title="cl
00041700:·6173·7320·696e·206f·7267·2e62·696f·6a61··ass·in·org.bioja00041700:·6173·7320·696e·206f·7267·2e62·696f·6a61··ass·in·org.bioja
00041710:·7661·2e6e·6269·6f2e·6f6e·746f·6c6f·6779··va.nbio.ontology00041710:·7661·2e6e·6269·6f2e·6f6e·746f·6c6f·6779··va.nbio.ontology
00041720:·223e·4170·703c·2f61·3e3c·2f64·743e·0a3c··">App</a></dt>.<00041720:·223e·4170·703c·2f61·3e3c·2f64·743e·0a3c··">App</a></dt>.<
00041730:·6464·3e26·6e62·7370·3b3c·2f64·643e·0a3c··dd>&nbsp;</dd>.<00041730:·6464·3e26·6e62·7370·3b3c·2f64·643e·0a3c··dd>&nbsp;</dd>.<
00041740:·6474·3e3c·6120·6872·6566·3d22·6f72·672f··dt><a·href="org/00041740:·6474·3e3c·6120·6872·6566·3d22·6f72·672f··dt><a·href="org/
Diff chunk too large, falling back to line-by-line diff (43652 lines added, 43652 lines removed)
00041750:·6269·6f6a·6176·612f·6e62·696f·2f67·656e··biojava/nbio/gen00041750:·6269·6f6a·6176·612f·6e62·696f·2f67·656e··biojava/nbio/gen
00041760:·6f6d·652f·696f·2f66·6173·7471·2f49·6c6c··ome/io/fastq/Ill00041760:·6f6d·652f·696f·2f66·6173·7471·2f53·6f6c··ome/io/fastq/Sol
00041770:·756d·696e·6146·6173·7471·5772·6974·6572··uminaFastqWriter00041770:·6578·6146·6173·7471·5772·6974·6572·2e68··exaFastqWriter.h
00041780:·2e68·746d·6c23·6170·7065·6e64·2854·2c6a··.html#append(T,j00041780:·746d·6c23·6170·7065·6e64·2854·2c6a·6176··tml#append(T,jav
00041790:·6176·612e·6c61·6e67·2e49·7465·7261·626c··ava.lang.Iterabl00041790:·612e·6c61·6e67·2e49·7465·7261·626c·6529··a.lang.Iterable)
000417a0:·6529·2220·636c·6173·733d·226d·656d·6265··e)"·class="membe000417a0:·2220·636c·6173·733d·226d·656d·6265·722d··"·class="member-
000417b0:·722d·6e61·6d65·2d6c·696e·6b22·3e61·7070··r-name-link">app000417b0:·6e61·6d65·2d6c·696e·6b22·3e61·7070·656e··name-link">appen
000417c0:·656e·6428·542c·2049·7465·7261·626c·6526··end(T,·Iterable&000417c0:·6428·542c·2049·7465·7261·626c·6526·6c74··d(T,·Iterable&lt
000417d0:·6c74·3b46·6173·7471·2667·743b·293c·2f61··lt;Fastq&gt;)</a000417d0:·3b46·6173·7471·2667·743b·293c·2f61·3e20··;Fastq&gt;)</a>·
000417e0:·3e20·2d20·4d65·7468·6f64·2069·6e20·636c··>·-·Method·in·cl000417e0:·2d20·4d65·7468·6f64·2069·6e20·636c·6173··-·Method·in·clas
000417f0:·6173·7320·6f72·672e·6269·6f6a·6176·612e··ass·org.biojava.000417f0:·7320·6f72·672e·6269·6f6a·6176·612e·6e62··s·org.biojava.nb
00041800:·6e62·696f·2e67·656e·6f6d·652e·696f·2e66··nbio.genome.io.f00041800:·696f·2e67·656e·6f6d·652e·696f·2e66·6173··io.genome.io.fas
00041810:·6173·7471·2e3c·6120·6872·6566·3d22·6f72··astq.<a·href="or00041810:·7471·2e3c·6120·6872·6566·3d22·6f72·672f··tq.<a·href="org/
00041820:·672f·6269·6f6a·6176·612f·6e62·696f·2f67··g/biojava/nbio/g00041820:·6269·6f6a·6176·612f·6e62·696f·2f67·656e··biojava/nbio/gen
00041830:·656e·6f6d·652f·696f·2f66·6173·7471·2f49··enome/io/fastq/I00041830:·6f6d·652f·696f·2f66·6173·7471·2f53·6f6c··ome/io/fastq/Sol
00041840:·6c6c·756d·696e·6146·6173·7471·5772·6974··lluminaFastqWrit00041840:·6578·6146·6173·7471·5772·6974·6572·2e68··exaFastqWriter.h
00041850:·6572·2e68·746d·6c22·2074·6974·6c65·3d22··er.html"·title="00041850:·746d·6c22·2074·6974·6c65·3d22·636c·6173··tml"·title="clas
00041860:·636c·6173·7320·696e·206f·7267·2e62·696f··class·in·org.bio00041860:·7320·696e·206f·7267·2e62·696f·6a61·7661··s·in·org.biojava
00041870:·6a61·7661·2e6e·6269·6f2e·6765·6e6f·6d65··java.nbio.genome00041870:·2e6e·6269·6f2e·6765·6e6f·6d65·2e69·6f2e··.nbio.genome.io.
00041880:·2e69·6f2e·6661·7374·7122·3e49·6c6c·756d··.io.fastq">Illum00041880:·6661·7374·7122·3e53·6f6c·6578·6146·6173··fastq">SolexaFas
00041890:·696e·6146·6173·7471·5772·6974·6572·3c2f··inaFastqWriter</00041890:·7471·5772·6974·6572·3c2f·613e·3c2f·6474··tqWriter</a></dt
000418a0:·613e·3c2f·6474·3e0a·3c64·643e·266e·6273··a></dt>.<dd>&nbs000418a0:·3e0a·3c64·643e·266e·6273·703b·3c2f·6464··>.<dd>&nbsp;</dd
000418b0:·703b·3c2f·6464·3e0a·3c64·743e·3c61·2068··p;</dd>.<dt><a·h000418b0:·3e0a·3c64·743e·3c61·2068·7265·663d·226f··>.<dt><a·href="o
000418c0:·7265·663d·226f·7267·2f62·696f·6a61·7661··ref="org/biojava000418c0:·7267·2f62·696f·6a61·7661·2f6e·6269·6f2f··rg/biojava/nbio/
000418d0:·2f6e·6269·6f2f·6765·6e6f·6d65·2f69·6f2f··/nbio/genome/io/000418d0:·6765·6e6f·6d65·2f69·6f2f·6661·7374·712f··genome/io/fastq/
000418e0:·6661·7374·712f·4661·7374·7157·7269·7465··fastq/FastqWrite000418e0:·4661·7374·7157·7269·7465·722e·6874·6d6c··FastqWriter.html
000418f0:·722e·6874·6d6c·2361·7070·656e·6428·542c··r.html#append(T,000418f0:·2361·7070·656e·6428·542c·6a61·7661·2e6c··#append(T,java.l
00041900:·6a61·7661·2e6c·616e·672e·4974·6572·6162··java.lang.Iterab00041900:·616e·672e·4974·6572·6162·6c65·2922·2063··ang.Iterable)"·c
00041910:·6c65·2922·2063·6c61·7373·3d22·6d65·6d62··le)"·class="memb00041910:·6c61·7373·3d22·6d65·6d62·6572·2d6e·616d··lass="member-nam
00041920:·6572·2d6e·616d·652d·6c69·6e6b·223e·6170··er-name-link">ap00041920:·652d·6c69·6e6b·223e·6170·7065·6e64·2854··e-link">append(T
00041930:·7065·6e64·2854·2c20·4974·6572·6162·6c65··pend(T,·Iterable00041930:·2c20·4974·6572·6162·6c65·266c·743b·4661··,·Iterable&lt;Fa
00041940:·266c·743b·4661·7374·7126·6774·3b29·3c2f··&lt;Fastq&gt;)</00041940:·7374·7126·6774·3b29·3c2f·613e·202d·204d··stq&gt;)</a>·-·M
00041950:·613e·202d·204d·6574·686f·6420·696e·2069··a>·-·Method·in·i00041950:·6574·686f·6420·696e·2069·6e74·6572·6661··ethod·in·interfa
00041960:·6e74·6572·6661·6365·206f·7267·2e62·696f··nterface·org.bio00041960:·6365·206f·7267·2e62·696f·6a61·7661·2e6e··ce·org.biojava.n
00041970:·6a61·7661·2e6e·6269·6f2e·6765·6e6f·6d65··java.nbio.genome00041970:·6269·6f2e·6765·6e6f·6d65·2e69·6f2e·6661··bio.genome.io.fa
00041980:·2e69·6f2e·6661·7374·712e·3c61·2068·7265··.io.fastq.<a·hre00041980:·7374·712e·3c61·2068·7265·663d·226f·7267··stq.<a·href="org
00041990:·663d·226f·7267·2f62·696f·6a61·7661·2f6e··f="org/biojava/n00041990:·2f62·696f·6a61·7661·2f6e·6269·6f2f·6765··/biojava/nbio/ge
000419a0:·6269·6f2f·6765·6e6f·6d65·2f69·6f2f·6661··bio/genome/io/fa000419a0:·6e6f·6d65·2f69·6f2f·6661·7374·712f·4661··nome/io/fastq/Fa
000419b0:·7374·712f·4661·7374·7157·7269·7465·722e··stq/FastqWriter.000419b0:·7374·7157·7269·7465·722e·6874·6d6c·2220··stqWriter.html"·
000419c0:·6874·6d6c·2220·7469·746c·653d·2269·6e74··html"·title="int000419c0:·7469·746c·653d·2269·6e74·6572·6661·6365··title="interface
000419d0:·6572·6661·6365·2069·6e20·6f72·672e·6269··erface·in·org.bi000419d0:·2069·6e20·6f72·672e·6269·6f6a·6176·612e···in·org.biojava.
000419e0:·6f6a·6176·612e·6e62·696f·2e67·656e·6f6d··ojava.nbio.genom000419e0:·6e62·696f·2e67·656e·6f6d·652e·696f·2e66··nbio.genome.io.f
000419f0:·652e·696f·2e66·6173·7471·223e·4661·7374··e.io.fastq">Fast000419f0:·6173·7471·223e·4661·7374·7157·7269·7465··astq">FastqWrite
00041a00:·7157·7269·7465·723c·2f61·3e3c·2f64·743e··qWriter</a></dt>00041a00:·723c·2f61·3e3c·2f64·743e·0a3c·6464·3e0a··r</a></dt>.<dd>.
00041a10:·0a3c·6464·3e0a·3c64·6976·2063·6c61·7373··.<dd>.<div·class00041a10:·3c64·6976·2063·6c61·7373·3d22·626c·6f63··<div·class="bloc
00041a20:·3d22·626c·6f63·6b22·3e41·7070·656e·6420··="block">Append·00041a20:·6b22·3e41·7070·656e·6420·7468·6520·7370··k">Append·the·sp
00041a30:·7468·6520·7370·6563·6966·6965·6420·4641··the·specified·FA00041a30:·6563·6966·6965·6420·4641·5354·5120·666f··ecified·FASTQ·fo
00041a40:·5354·5120·666f·726d·6174·7465·6420·7365··STQ·formatted·se00041a40:·726d·6174·7465·6420·7365·7175·656e·6365··rmatted·sequence
00041a50:·7175·656e·6365·7320·746f·2074·6865·2073··quences·to·the·s00041a50:·7320·746f·2074·6865·2073·7065·6369·6669··s·to·the·specifi
00041a60:·7065·6369·6669·6564·2061·7070·656e·6461··pecified·appenda00041a60:·6564·2061·7070·656e·6461·626c·652e·3c2f··ed·appendable.</
00041a70:·626c·652e·3c2f·6469·763e·0a3c·2f64·643e··ble.</div>.</dd>00041a70:·6469·763e·0a3c·2f64·643e·0a3c·6474·3e3c··div>.</dd>.<dt><
00041a80:·0a3c·6474·3e3c·6120·6872·6566·3d22·6f72··.<dt><a·href="or00041a80:·6120·6872·6566·3d22·6f72·672f·6269·6f6a··a·href="org/bioj
00041a90:·672f·6269·6f6a·6176·612f·6e62·696f·2f67··g/biojava/nbio/g00041a90:·6176·612f·6e62·696f·2f67·656e·6f6d·652f··ava/nbio/genome/
00041aa0:·656e·6f6d·652f·696f·2f66·6173·7471·2f49··enome/io/fastq/I00041aa0:·696f·2f66·6173·7471·2f53·6f6c·6578·6146··io/fastq/SolexaF
00041ab0:·6c6c·756d·696e·6146·6173·7471·5772·6974··lluminaFastqWrit00041ab0:·6173·7471·5772·6974·6572·2e68·746d·6c23··astqWriter.html#
00041ac0:·6572·2e68·746d·6c23·6170·7065·6e64·2854··er.html#append(T00041ac0:·6170·7065·6e64·2854·2c6f·7267·2e62·696f··append(T,org.bio
00041ad0:·2c6f·7267·2e62·696f·6a61·7661·2e6e·6269··,org.biojava.nbi00041ad0:·6a61·7661·2e6e·6269·6f2e·6765·6e6f·6d65··java.nbio.genome
00041ae0:·6f2e·6765·6e6f·6d65·2e69·6f2e·6661·7374··o.genome.io.fast00041ae0:·2e69·6f2e·6661·7374·712e·4661·7374·712e··.io.fastq.Fastq.
00041af0:·712e·4661·7374·712e·2e2e·2922·2063·6c61··q.Fastq...)"·cla00041af0:·2e2e·2922·2063·6c61·7373·3d22·6d65·6d62··..)"·class="memb
00041b00:·7373·3d22·6d65·6d62·6572·2d6e·616d·652d··ss="member-name-00041b00:·6572·2d6e·616d·652d·6c69·6e6b·223e·6170··er-name-link">ap
00041b10:·6c69·6e6b·223e·6170·7065·6e64·2854·2c20··link">append(T,·00041b10:·7065·6e64·2854·2c20·4661·7374·712e·2e2e··pend(T,·Fastq...
00041b20:·4661·7374·712e·2e2e·293c·2f61·3e20·2d20··Fastq...)</a>·-·00041b20:·293c·2f61·3e20·2d20·4d65·7468·6f64·2069··)</a>·-·Method·i
00041b30:·4d65·7468·6f64·2069·6e20·636c·6173·7320··Method·in·class·00041b30:·6e20·636c·6173·7320·6f72·672e·6269·6f6a··n·class·org.bioj
00041b40:·6f72·672e·6269·6f6a·6176·612e·6e62·696f··org.biojava.nbio00041b40:·6176·612e·6e62·696f·2e67·656e·6f6d·652e··ava.nbio.genome.
00041b50:·2e67·656e·6f6d·652e·696f·2e66·6173·7471··.genome.io.fastq00041b50:·696f·2e66·6173·7471·2e3c·6120·6872·6566··io.fastq.<a·href
00041b60:·2e3c·6120·6872·6566·3d22·6f72·672f·6269··.<a·href="org/bi00041b60:·3d22·6f72·672f·6269·6f6a·6176·612f·6e62··="org/biojava/nb
00041b70:·6f6a·6176·612f·6e62·696f·2f67·656e·6f6d··ojava/nbio/genom00041b70:·696f·2f67·656e·6f6d·652f·696f·2f66·6173··io/genome/io/fas
00041b80:·652f·696f·2f66·6173·7471·2f49·6c6c·756d··e/io/fastq/Illum00041b80:·7471·2f53·6f6c·6578·6146·6173·7471·5772··tq/SolexaFastqWr
00041b90:·696e·6146·6173·7471·5772·6974·6572·2e68··inaFastqWriter.h00041b90:·6974·6572·2e68·746d·6c22·2074·6974·6c65··iter.html"·title
00041ba0:·746d·6c22·2074·6974·6c65·3d22·636c·6173··tml"·title="clas00041ba0:·3d22·636c·6173·7320·696e·206f·7267·2e62··="class·in·org.b
00041bb0:·7320·696e·206f·7267·2e62·696f·6a61·7661··s·in·org.biojava00041bb0:·696f·6a61·7661·2e6e·6269·6f2e·6765·6e6f··iojava.nbio.geno
00041bc0:·2e6e·6269·6f2e·6765·6e6f·6d65·2e69·6f2e··.nbio.genome.io.00041bc0:·6d65·2e69·6f2e·6661·7374·7122·3e53·6f6c··me.io.fastq">Sol
00041bd0:·6661·7374·7122·3e49·6c6c·756d·696e·6146··fastq">IlluminaF00041bd0:·6578·6146·6173·7471·5772·6974·6572·3c2f··exaFastqWriter</
00041be0:·6173·7471·5772·6974·6572·3c2f·613e·3c2f··astqWriter</a></00041be0:·613e·3c2f·6474·3e0a·3c64·643e·266e·6273··a></dt>.<dd>&nbs
00041bf0:·6474·3e0a·3c64·643e·266e·6273·703b·3c2f··dt>.<dd>&nbsp;</00041bf0:·703b·3c2f·6464·3e0a·3c64·743e·3c61·2068··p;</dd>.<dt><a·h
00041c00:·6464·3e0a·3c64·743e·3c61·2068·7265·663d··dd>.<dt><a·href=00041c00:·7265·663d·226f·7267·2f62·696f·6a61·7661··ref="org/biojava
00041c10:·226f·7267·2f62·696f·6a61·7661·2f6e·6269··"org/biojava/nbi00041c10:·2f6e·6269·6f2f·6765·6e6f·6d65·2f69·6f2f··/nbio/genome/io/
00041c20:·6f2f·6765·6e6f·6d65·2f69·6f2f·6661·7374··o/genome/io/fast00041c20:·6661·7374·712f·4661·7374·7157·7269·7465··fastq/FastqWrite
00041c30:·712f·4661·7374·7157·7269·7465·722e·6874··q/FastqWriter.ht00041c30:·722e·6874·6d6c·2361·7070·656e·6428·542c··r.html#append(T,
00041c40:·6d6c·2361·7070·656e·6428·542c·6f72·672e··ml#append(T,org.00041c40:·6f72·672e·6269·6f6a·6176·612e·6e62·696f··org.biojava.nbio
00041c50:·6269·6f6a·6176·612e·6e62·696f·2e67·656e··biojava.nbio.gen00041c50:·2e67·656e·6f6d·652e·696f·2e66·6173·7471··.genome.io.fastq
00041c60:·6f6d·652e·696f·2e66·6173·7471·2e46·6173··ome.io.fastq.Fas00041c60:·2e46·6173·7471·2e2e·2e29·2220·636c·6173··.Fastq...)"·clas
00041c70:·7471·2e2e·2e29·2220·636c·6173·733d·226d··tq...)"·class="m00041c70:·733d·226d·656d·6265·722d·6e61·6d65·2d6c··s="member-name-l
00041c80:·656d·6265·722d·6e61·6d65·2d6c·696e·6b22··ember-name-link"00041c80:·696e·6b22·3e61·7070·656e·6428·542c·2046··ink">append(T,·F
00041c90:·3e61·7070·656e·6428·542c·2046·6173·7471··>append(T,·Fastq00041c90:·6173·7471·2e2e·2e29·3c2f·613e·202d·204d··astq...)</a>·-·M
00041ca0:·2e2e·2e29·3c2f·613e·202d·204d·6574·686f··...)</a>·-·Metho00041ca0:·6574·686f·6420·696e·2069·6e74·6572·6661··ethod·in·interfa
00041cb0:·6420·696e·2069·6e74·6572·6661·6365·206f··d·in·interface·o00041cb0:·6365·206f·7267·2e62·696f·6a61·7661·2e6e··ce·org.biojava.n
00041cc0:·7267·2e62·696f·6a61·7661·2e6e·6269·6f2e··rg.biojava.nbio.00041cc0:·6269·6f2e·6765·6e6f·6d65·2e69·6f2e·6661··bio.genome.io.fa
00041cd0:·6765·6e6f·6d65·2e69·6f2e·6661·7374·712e··genome.io.fastq.00041cd0:·7374·712e·3c61·2068·7265·663d·226f·7267··stq.<a·href="org
00041ce0:·3c61·2068·7265·663d·226f·7267·2f62·696f··<a·href="org/bio00041ce0:·2f62·696f·6a61·7661·2f6e·6269·6f2f·6765··/biojava/nbio/ge
00041cf0:·6a61·7661·2f6e·6269·6f2f·6765·6e6f·6d65··java/nbio/genome00041cf0:·6e6f·6d65·2f69·6f2f·6661·7374·712f·4661··nome/io/fastq/Fa
00041d00:·2f69·6f2f·6661·7374·712f·4661·7374·7157··/io/fastq/FastqW00041d00:·7374·7157·7269·7465·722e·6874·6d6c·2220··stqWriter.html"·
00041d10:·7269·7465·722e·6874·6d6c·2220·7469·746c··riter.html"·titl00041d10:·7469·746c·653d·2269·6e74·6572·6661·6365··title="interface
00041d20:·653d·2269·6e74·6572·6661·6365·2069·6e20··e="interface·in·00041d20:·2069·6e20·6f72·672e·6269·6f6a·6176·612e···in·org.biojava.
00041d30:·6f72·672e·6269·6f6a·6176·612e·6e62·696f··org.biojava.nbio00041d30:·6e62·696f·2e67·656e·6f6d·652e·696f·2e66··nbio.genome.io.f
00041d40:·2e67·656e·6f6d·652e·696f·2e66·6173·7471··.genome.io.fastq00041d40:·6173·7471·223e·4661·7374·7157·7269·7465··astq">FastqWrite
00041d50:·223e·4661·7374·7157·7269·7465·723c·2f61··">FastqWriter</a00041d50:·723c·2f61·3e3c·2f64·743e·0a3c·6464·3e0a··r</a></dt>.<dd>.
00041d60:·3e3c·2f64·743e·0a3c·6464·3e0a·3c64·6976··></dt>.<dd>.<div00041d60:·3c64·6976·2063·6c61·7373·3d22·626c·6f63··<div·class="bloc
00041d70:·2063·6c61·7373·3d22·626c·6f63·6b22·3e41···class="block">A00041d70:·6b22·3e41·7070·656e·6420·7468·6520·7370··k">Append·the·sp
00041d80:·7070·656e·6420·7468·6520·7370·6563·6966··ppend·the·specif00041d80:·6563·6966·6965·6420·4641·5354·5120·666f··ecified·FASTQ·fo
00041d90:·6965·6420·4641·5354·5120·666f·726d·6174··ied·FASTQ·format00041d90:·726d·6174·7465·6420·7365·7175·656e·6365··rmatted·sequence
00041da0:·7465·6420·7365·7175·656e·6365·7320·746f··ted·sequences·to00041da0:·7320·746f·2074·6865·2073·7065·6369·6669··s·to·the·specifi
00041db0:·2074·6865·2073·7065·6369·6669·6564·2061···the·specified·a00041db0:·6564·2061·7070·656e·6461·626c·652e·3c2f··ed·appendable.</
00041dc0:·7070·656e·6461·626c·652e·3c2f·6469·763e··ppendable.</div>00041dc0:·6469·763e·0a3c·2f64·643e·0a3c·6474·3e3c··div>.</dd>.<dt><
00041dd0:·0a3c·2f64·643e·0a3c·6474·3e3c·6120·6872··.</dd>.<dt><a·hr00041dd0:·6120·6872·6566·3d22·6f72·672f·666f·7265··a·href="org/fore
00041de0:·6566·3d22·6f72·672f·666f·7265·7374·6572··ef="org/forester00041de0:·7374·6572·2f70·6879·6c6f·6765·6e79·2f64··ster/phylogeny/d
00041df0:·2f70·6879·6c6f·6765·6e79·2f64·6174·612f··/phylogeny/data/00041df0:·6174·612f·5068·796c·6f67·656e·7944·6174··ata/PhylogenyDat
00041e00:·5068·796c·6f67·656e·7944·6174·6155·7469··PhylogenyDataUti00041e00:·6155·7469·6c2e·6874·6d6c·2361·7070·656e··aUtil.html#appen
00041e10:·6c2e·6874·6d6c·2361·7070·656e·6443·6c6f··l.html#appendClo00041e10:·6443·6c6f·7365·286a·6176·612e·696f·2e57··dClose(java.io.W
00041e20:·7365·286a·6176·612e·696f·2e57·7269·7465··se(java.io.Write00041e20:·7269·7465·722c·6a61·7661·2e6c·616e·672e··riter,java.lang.
00041e30:·722c·6a61·7661·2e6c·616e·672e·5374·7269··r,java.lang.Stri00041e30:·5374·7269·6e67·2922·2063·6c61·7373·3d22··String)"·class="
00041e40:·6e67·2922·2063·6c61·7373·3d22·6d65·6d62··ng)"·class="memb00041e40:·6d65·6d62·6572·2d6e·616d·652d·6c69·6e6b··member-name-link
00041e50:·6572·2d6e·616d·652d·6c69·6e6b·223e·6170··er-name-link">ap00041e50:·223e·6170·7065·6e64·436c·6f73·6528·5772··">appendClose(Wr
00041e60:·7065·6e64·436c·6f73·6528·5772·6974·6572··pendClose(Writer00041e60:·6974·6572·2c20·5374·7269·6e67·293c·2f61··iter,·String)</a
00041e70:·2c20·5374·7269·6e67·293c·2f61·3e20·2d20··,·String)</a>·-·00041e70:·3e20·2d20·5374·6174·6963·206d·6574·686f··>·-·Static·metho
00041e80:·5374·6174·6963·206d·6574·686f·6420·696e··Static·method·in00041e80:·6420·696e·2063·6c61·7373·206f·7267·2e66··d·in·class·org.f
00041e90:·2063·6c61·7373·206f·7267·2e66·6f72·6573···class·org.fores00041e90:·6f72·6573·7465·722e·7068·796c·6f67·656e··orester.phylogen
00041ea0:·7465·722e·7068·796c·6f67·656e·792e·6461··ter.phylogeny.da00041ea0:·792e·6461·7461·2e3c·6120·6872·6566·3d22··y.data.<a·href="
00041eb0:·7461·2e3c·6120·6872·6566·3d22·6f72·672f··ta.<a·href="org/00041eb0:·6f72·672f·666f·7265·7374·6572·2f70·6879··org/forester/phy
00041ec0:·666f·7265·7374·6572·2f70·6879·6c6f·6765··forester/phyloge00041ec0:·6c6f·6765·6e79·2f64·6174·612f·5068·796c··logeny/data/Phyl
Max diff block lines reached; 47797124/53821686 bytes (88.81%) of diff not shown.
⊟
4.87 KB
html2text {}
    
Offset 1853, 22 lines modifiedOffset 1853, 22 lines modified
1853 ··_\x8A_\x8p_\x8p·-·Class·in·_\x8o_\x8r_\x8g_\x8._\x8b_\x8i_\x8o_\x8j_\x8a_\x8v_\x8a_\x8._\x8n_\x8b_\x8i_\x8o_\x8._\x8o_\x8n_\x8t_\x8o_\x8l_\x8o_\x8g_\x8y1853 ··_\x8A_\x8p_\x8p·-·Class·in·_\x8o_\x8r_\x8g_\x8._\x8b_\x8i_\x8o_\x8j_\x8a_\x8v_\x8a_\x8._\x8n_\x8b_\x8i_\x8o_\x8._\x8o_\x8n_\x8t_\x8o_\x8l_\x8o_\x8g_\x8y
1854 ······Hello·world!1854 ······Hello·world!
1855 ··_\x8A_\x8p_\x8p_\x8(_\x8)·-·Constructor·for·class·org.biojava.nbio.genome._\x8A_\x8p_\x8p1855 ··_\x8A_\x8p_\x8p_\x8(_\x8)·-·Constructor·for·class·org.biojava.nbio.genome._\x8A_\x8p_\x8p
1856 ······ 1856 ······ 
1857 ··_\x8A_\x8p_\x8p_\x8(_\x8)·-·Constructor·for·class·org.biojava.nbio.ontology._\x8A_\x8p_\x8p1857 ··_\x8A_\x8p_\x8p_\x8(_\x8)·-·Constructor·for·class·org.biojava.nbio.ontology._\x8A_\x8p_\x8p
1858 ······ 1858 ······ 
1859 ··_\x8a_\x8p_\x8p_\x8e_\x8n_\x8d_\x8(_\x8T_\x8,_\x8·_\x8I_\x8t_\x8e_\x8r_\x8a_\x8b_\x8l_\x8e_\x8<_\x8F_\x8a_\x8s_\x8t_\x8q_\x8>_\x8)·-·Method·in·class1859 ··_\x8a_\x8p_\x8p_\x8e_\x8n_\x8d_\x8(_\x8T_\x8,_\x8·_\x8I_\x8t_\x8e_\x8r_\x8a_\x8b_\x8l_\x8e_\x8<_\x8F_\x8a_\x8s_\x8t_\x8q_\x8>_\x8)·-·Method·in·class
1860 ··org.biojava.nbio.genome.io.fastq._\x8I_.l_.l_.u_.m_.i_.n_\x8a_\x8F_\x8a_\x8s_\x8t_\x8q_\x8W_\x8r_\x8i_\x8t_\x8e_\x8r1860 ··org.biojava.nbio.genome.io.fastq._\x8S_.o_.l_.e_.x_\x8a_\x8F_\x8a_\x8s_\x8t_\x8q_\x8W_\x8r_\x8i_\x8t_\x8e_\x8r
1861 ······ 1861 ······ 
1862 ··_\x8a_\x8p_\x8p_\x8e_\x8n_\x8d_\x8(_\x8T_\x8,_\x8·_\x8I_\x8t_\x8e_\x8r_\x8a_\x8b_\x8l_\x8e_\x8<_\x8F_\x8a_\x8s_\x8t_\x8q_\x8>_\x8)·-·Method·in·interface1862 ··_\x8a_\x8p_\x8p_\x8e_\x8n_\x8d_\x8(_\x8T_\x8,_\x8·_\x8I_\x8t_\x8e_\x8r_\x8a_\x8b_\x8l_\x8e_\x8<_\x8F_\x8a_\x8s_\x8t_\x8q_\x8>_\x8)·-·Method·in·interface
1863 ··org.biojava.nbio.genome.io.fastq._\x8F_\x8a_\x8s_\x8t_\x8q_\x8W_\x8r_\x8i_\x8t_\x8e_\x8r1863 ··org.biojava.nbio.genome.io.fastq._\x8F_\x8a_\x8s_\x8t_\x8q_\x8W_\x8r_\x8i_\x8t_\x8e_\x8r
1864 ······Append·the·specified·FASTQ·formatted·sequences·to·the·specified1864 ······Append·the·specified·FASTQ·formatted·sequences·to·the·specified
1865 ······appendable.1865 ······appendable.
1866 ··_\x8a_\x8p_\x8p_\x8e_\x8n_\x8d_\x8(_\x8T_\x8,_\x8·_\x8F_\x8a_\x8s_\x8t_\x8q_\x8._\x8._\x8._\x8)·-·Method·in·class1866 ··_\x8a_\x8p_\x8p_\x8e_\x8n_\x8d_\x8(_\x8T_\x8,_\x8·_\x8F_\x8a_\x8s_\x8t_\x8q_\x8._\x8._\x8._\x8)·-·Method·in·class
1867 ··org.biojava.nbio.genome.io.fastq._\x8I_.l_.l_.u_.m_.i_.n_\x8a_\x8F_\x8a_\x8s_\x8t_\x8q_\x8W_\x8r_\x8i_\x8t_\x8e_\x8r1867 ··org.biojava.nbio.genome.io.fastq._\x8S_.o_.l_.e_.x_\x8a_\x8F_\x8a_\x8s_\x8t_\x8q_\x8W_\x8r_\x8i_\x8t_\x8e_\x8r
1868 ······ 1868 ······ 
1869 ··_\x8a_\x8p_\x8p_\x8e_\x8n_\x8d_\x8(_\x8T_\x8,_\x8·_\x8F_\x8a_\x8s_\x8t_\x8q_\x8._\x8._\x8._\x8)·-·Method·in·interface1869 ··_\x8a_\x8p_\x8p_\x8e_\x8n_\x8d_\x8(_\x8T_\x8,_\x8·_\x8F_\x8a_\x8s_\x8t_\x8q_\x8._\x8._\x8._\x8)·-·Method·in·interface
1870 ··org.biojava.nbio.genome.io.fastq._\x8F_\x8a_\x8s_\x8t_\x8q_\x8W_\x8r_\x8i_\x8t_\x8e_\x8r1870 ··org.biojava.nbio.genome.io.fastq._\x8F_\x8a_\x8s_\x8t_\x8q_\x8W_\x8r_\x8i_\x8t_\x8e_\x8r
1871 ······Append·the·specified·FASTQ·formatted·sequences·to·the·specified1871 ······Append·the·specified·FASTQ·formatted·sequences·to·the·specified
1872 ······appendable.1872 ······appendable.
1873 ··_\x8a_\x8p_\x8p_\x8e_\x8n_\x8d_\x8C_\x8l_\x8o_\x8s_\x8e_\x8(_\x8W_\x8r_\x8i_\x8t_\x8e_\x8r_\x8,_\x8·_\x8S_\x8t_\x8r_\x8i_\x8n_\x8g_\x8)·-·Static·method·in·class1873 ··_\x8a_\x8p_\x8p_\x8e_\x8n_\x8d_\x8C_\x8l_\x8o_\x8s_\x8e_\x8(_\x8W_\x8r_\x8i_\x8t_\x8e_\x8r_\x8,_\x8·_\x8S_\x8t_\x8r_\x8i_\x8n_\x8g_\x8)·-·Static·method·in·class
1874 ··org.forester.phylogeny.data._\x8P_\x8h_\x8y_\x8l_\x8o_\x8g_\x8e_\x8n_\x8y_\x8D_\x8a_\x8t_\x8a_\x8U_\x8t_\x8i_\x8l1874 ··org.forester.phylogeny.data._\x8P_\x8h_\x8y_\x8l_\x8o_\x8g_\x8e_\x8n_\x8y_\x8D_\x8a_\x8t_\x8a_\x8U_\x8t_\x8i_\x8l
⊟
2.93 KB
./usr/share/doc/libbiojava6-java/apidocs/member-search-index.js
⊟
2.81 KB
js-beautify {}
    
Offset 2471, 25 lines modifiedOffset 2471, 25 lines modified
2471 },·{2471 },·{
2472 ····"p":·"org.biojava.nbio.ontology",2472 ····"p":·"org.biojava.nbio.ontology",
2473 ····"c":·"App",2473 ····"c":·"App",
2474 ····"l":·"App()",2474 ····"l":·"App()",
2475 ····"u":·"%3Cinit%3E()"2475 ····"u":·"%3Cinit%3E()"
2476 },·{2476 },·{
2477 ····"p":·"org.biojava.nbio.genome.io.fastq",2477 ····"p":·"org.biojava.nbio.genome.io.fastq",
2478 ····"c":·"IlluminaFastqWriter",2478 ····"c":·"SolexaFastqWriter",
2479 ····"l":·"append(T,·Fastq...)",2479 ····"l":·"append(T,·Fastq...)",
2480 ····"u":·"append(T,org.biojava.nbio.genome.io.fastq.Fastq...)"2480 ····"u":·"append(T,org.biojava.nbio.genome.io.fastq.Fastq...)"
2481 },·{2481 },·{
2482 ····"p":·"org.biojava.nbio.genome.io.fastq",2482 ····"p":·"org.biojava.nbio.genome.io.fastq",
2483 ····"c":·"FastqWriter",2483 ····"c":·"FastqWriter",
2484 ····"l":·"append(T,·Fastq...)",2484 ····"l":·"append(T,·Fastq...)",
2485 ····"u":·"append(T,org.biojava.nbio.genome.io.fastq.Fastq...)"2485 ····"u":·"append(T,org.biojava.nbio.genome.io.fastq.Fastq...)"
2486 },·{2486 },·{
2487 ····"p":·"org.biojava.nbio.genome.io.fastq",2487 ····"p":·"org.biojava.nbio.genome.io.fastq",
2488 ····"c":·"IlluminaFastqWriter",2488 ····"c":·"SolexaFastqWriter",
2489 ····"l":·"append(T,·Iterable<Fastq>)",2489 ····"l":·"append(T,·Iterable<Fastq>)",
2490 ····"u":·"append(T,java.lang.Iterable)"2490 ····"u":·"append(T,java.lang.Iterable)"
2491 },·{2491 },·{
2492 ····"p":·"org.biojava.nbio.genome.io.fastq",2492 ····"p":·"org.biojava.nbio.genome.io.fastq",
2493 ····"c":·"FastqWriter",2493 ····"c":·"FastqWriter",
2494 ····"l":·"append(T,·Iterable<Fastq>)",2494 ····"l":·"append(T,·Iterable<Fastq>)",
2495 ····"u":·"append(T,java.lang.Iterable)"2495 ····"u":·"append(T,java.lang.Iterable)"
Generated by diffoscope 265