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1 | -rw-r--r--···0········0········0········4·2024-11-01·03:23:53.000000·debian-binary | 1 | -rw-r--r--···0········0········0········4·2024-11-01·03:23:53.000000·debian-binary |
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1 | Package:·gromacs-data | 1 | Package:·gromacs-data |
2 | Source:·gromacs | 2 | Source:·gromacs |
3 | Version:·2024.4-1 | 3 | Version:·2024.4-1 |
4 | Architecture:·all | 4 | Architecture:·all |
5 | Maintainer:·Debichem·Team·<debichem-devel@lists.alioth.debian.org> | 5 | Maintainer:·Debichem·Team·<debichem-devel@lists.alioth.debian.org> |
6 | Installed-Size:·3004 | 6 | Installed-Size:·300453 |
7 | Depends:·libjs-mathjax | 7 | Depends:·libjs-mathjax |
8 | Recommends:·gromacs | 8 | Recommends:·gromacs |
9 | Section:·science | 9 | Section:·science |
10 | Priority:·optional | 10 | Priority:·optional |
11 | Multi-Arch:·foreign | 11 | Multi-Arch:·foreign |
12 | Homepage:·https://www.gromacs.org/ | 12 | Homepage:·https://www.gromacs.org/ |
13 | Description:·GROMACS·molecular·dynamics·sim,·data·and·documentation | 13 | Description:·GROMACS·molecular·dynamics·sim,·data·and·documentation |
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74 | </div><!--·top·--> | 74 | </div><!--·top·--> |
75 | <div><div·class="header"> | 75 | <div><div·class="header"> |
76 | ··<div·class="headertitle"><div·class="title">Module·dependency·graph</div></div> | 76 | ··<div·class="headertitle"><div·class="title">Module·dependency·graph</div></div> |
77 | </div><!--header--> | 77 | </div><!--header--> |
78 | <div·class="contents"> | 78 | <div·class="contents"> |
79 | <div·class="textblock"><p>The·graph·below·shows·the·dependencies·between·the·source·code·modules,·computed·from·include·statements·in·the·code.·For·documented·modules·(those·that·do·not·have·a·gray·background),·clicking·on·the·module·takes·you·to·the·module·documentation.·Legend·for·the·graph·can·be·found·below·the·graph.</p> | 79 | <div·class="textblock"><p>The·graph·below·shows·the·dependencies·between·the·source·code·modules,·computed·from·include·statements·in·the·code.·For·documented·modules·(those·that·do·not·have·a·gray·background),·clicking·on·the·module·takes·you·to·the·module·documentation.·Legend·for·the·graph·can·be·found·below·the·graph.</p> |
80 | <div·class="dotgraph"> | 80 | <div·class="dotgraph"> |
81 | <iframe·scrolling="no"·frameborder="0"·src="dot_module-deps.svg"·width="3 | 81 | <iframe·scrolling="no"·frameborder="0"·src="dot_module-deps.svg"·width="3612"·height="1663"><p><b>This·browser·is·not·able·to·show·SVG:·try·Firefox,·Chrome,·Safari,·or·Opera·instead.</b></p></iframe></div> |
82 | ·<h1><a·class="anchor"·id="autotoc_md49"></a> | 82 | ·<h1><a·class="anchor"·id="autotoc_md49"></a> |
83 | Legend</h1> | 83 | Legend</h1> |
84 | <p>The·graph·below·annotates·the·colors·and·line·styles·used·in·the·module·dependency·graph·above.·More·detailed·textual·annotation·is·below·the·graph.</p> | 84 | <p>The·graph·below·annotates·the·colors·and·line·styles·used·in·the·module·dependency·graph·above.·More·detailed·textual·annotation·is·below·the·graph.</p> |
85 | <div·class="dotgraph"> | 85 | <div·class="dotgraph"> |
86 | <iframe·scrolling="no"·frameborder="0"·src="dot_inline_dotgraph_2.svg"·width="440"·height="407"><p><b>This·browser·is·not·able·to·show·SVG:·try·Firefox,·Chrome,·Safari,·or·Opera·instead.</b></p></iframe></div> | 86 | <iframe·scrolling="no"·frameborder="0"·src="dot_inline_dotgraph_2.svg"·width="440"·height="407"><p><b>This·browser·is·not·able·to·show·SVG:·try·Firefox,·Chrome,·Safari,·or·Opera·instead.</b></p></iframe></div> |
87 | <p>Node·colors:·</p><dl> | 87 | <p>Node·colors:·</p><dl> |
88 | <dt>gray·background·</dt> | 88 | <dt>gray·background·</dt> |
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145 | ····['manager_107',·['manager',·['../page_wrapperbinary.xhtml#section_wrapperbinary_manager',·1,·'Command·line·manager'], | 145 | ····['manager_107',·['manager',·['../page_wrapperbinary.xhtml#section_wrapperbinary_manager',·1,·'Command·line·manager'], |
146 | ········['../classgmx_1_1test_1_1CommandLineModuleManagerTestBase.xhtml#a4b476b8e0f4a76c7ceeed026734ea8dd',·1,·'gmx::test::CommandLineModuleManagerTestBase::manager()'], | 146 | ········['../classgmx_1_1test_1_1CommandLineModuleManagerTestBase.xhtml#a4b476b8e0f4a76c7ceeed026734ea8dd',·1,·'gmx::test::CommandLineModuleManagerTestBase::manager()'], |
147 | ········['../page_modularsimulator.xhtml#autotoc_md48',·1,·'Reference·temperature·manager'] | 147 | ········['../page_modularsimulator.xhtml#autotoc_md48',·1,·'Reference·temperature·manager'] |
148 | ····]], | 148 | ····]], |
149 | ····['manager_2ecpp_108',·['manager.cpp',·['../manager_8cpp.xhtml',·1,·'']]], | 149 | ····['manager_2ecpp_108',·['manager.cpp',·['../manager_8cpp.xhtml',·1,·'']]], |
150 | ····['manager_2eh_109',·['manager.h',·['../manager_8h.xhtml',·1,·'']]], | 150 | ····['manager_2eh_109',·['manager.h',·['../manager_8h.xhtml',·1,·'']]], |
151 | ····['managers_5f_110',·['managers_',·['../classgmx_1_1internal_1_1OptionsImpl.xhtml#ac6b12c0ab7bd35f3223562488836479f',·1,·'gmx::internal::OptionsImpl::managers_'], | ||
152 | ····· | 151 | ····['managers_5f_110',·['managers_',·['../classgmx_1_1internal_1_1OptionSectionImpl.xhtml#a83daffc3bbc78602b537d5968aa89fb2',·1,·'gmx::internal::OptionSectionImpl::managers_'], |
152 | ········['../classgmx_1_1internal_1_1OptionsImpl.xhtml#ac6b12c0ab7bd35f3223562488836479f',·1,·'gmx::internal::OptionsImpl::managers_'] | ||
153 | ····]], | 153 | ····]], |
154 | ····['managesyncwithppcoordinatesendergpu_111',·['manageSyncWithPpCoordinateSenderGpu',·['../pme__gpu__internal_8cpp.xhtml#accf882be0b30fca6ededabd9470cfbc7',·1,·'pme_gpu_internal.cpp']]], | 154 | ····['managesyncwithppcoordinatesendergpu_111',·['manageSyncWithPpCoordinateSenderGpu',·['../pme__gpu__internal_8cpp.xhtml#accf882be0b30fca6ededabd9470cfbc7',·1,·'pme_gpu_internal.cpp']]], |
155 | ····['manualoutputfile_112',·['ManualOutputFile',·['../structgmx_1_1test_1_1anonymous__namespace_02extract__cluster_8cpp_03_1_1ManualOutputFile.xhtml',·1,·'gmx::test::anonymous_namespace{extract_cluster.cpp}']]], | 155 | ····['manualoutputfile_112',·['ManualOutputFile',·['../structgmx_1_1test_1_1anonymous__namespace_02extract__cluster_8cpp_03_1_1ManualOutputFile.xhtml',·1,·'gmx::test::anonymous_namespace{extract_cluster.cpp}']]], |
156 | ····['many_5fauto_5fcorrel_113',·['many_auto_correl',·['../manyautocorrelation_8h.xhtml#ad3b9966ff6279f6316c3c898e31f0dee',·1,·'many_auto_correl(std::vector<·std::vector<·real·>·>·*c): manyautocorrelation.cpp'], | 156 | ····['many_5fauto_5fcorrel_113',·['many_auto_correl',·['../manyautocorrelation_8h.xhtml#ad3b9966ff6279f6316c3c898e31f0dee',·1,·'many_auto_correl(std::vector<·std::vector<·real·>·>·*c): manyautocorrelation.cpp'], |
157 | ········['../manyautocorrelation_8cpp.xhtml#ad3b9966ff6279f6316c3c898e31f0dee',·1,·'many_auto_correl(std::vector<·std::vector<·real·>·>·*c): manyautocorrelation.cpp'] | 157 | ········['../manyautocorrelation_8cpp.xhtml#ad3b9966ff6279f6316c3c898e31f0dee',·1,·'many_auto_correl(std::vector<·std::vector<·real·>·>·*c): manyautocorrelation.cpp'] |
158 | ····]], | 158 | ····]], |
159 | ····['many_5fcross_5fcorr_114',·['many_cross_corr',·['../crosscorr_8cpp.xhtml#a953d512f8171310c10a4d0f4121d1a33',·1,·'many_cross_corr(int·nFunc,·int·*nData,·real·**f,·real·**g,·real·**corr): crosscorr.cpp'], | 159 | ····['many_5fcross_5fcorr_114',·['many_cross_corr',·['../crosscorr_8cpp.xhtml#a953d512f8171310c10a4d0f4121d1a33',·1,·'many_cross_corr(int·nFunc,·int·*nData,·real·**f,·real·**g,·real·**corr): crosscorr.cpp'], |
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168 | ····['mapconstiterator_119',·['MapConstIterator',·['../classgmx_1_1EnergyFrame.xhtml#a5b3ca67a8497cc2cf77f3c0da771fa95',·1,·'gmx::EnergyFrame']]], | 168 | ····['mapconstiterator_119',·['MapConstIterator',·['../classgmx_1_1EnergyFrame.xhtml#a5b3ca67a8497cc2cf77f3c0da771fa95',·1,·'gmx::EnergyFrame']]], |
169 | ····['mapgridtodatagrid_120',·['mapGridToDataGrid',·['../namespacegmx.xhtml#ad49aba237e75034450c40885fccde22c',·1,·'gmx']]], | 169 | ····['mapgridtodatagrid_120',·['mapGridToDataGrid',·['../namespacegmx.xhtml#ad49aba237e75034450c40885fccde22c',·1,·'gmx']]], |
170 | ····['mapid_121',·['mapid',·['../structgmx__ana__indexmap__t.xhtml#a2675a18d204f864f94da0d616c115884',·1,·'gmx_ana_indexmap_t']]], | 170 | ····['mapid_121',·['mapid',·['../structgmx__ana__indexmap__t.xhtml#a2675a18d204f864f94da0d616c115884',·1,·'gmx_ana_indexmap_t']]], |
171 | ····['mappedid_122',·['mappedId',·['../classgmx_1_1SelectionPosition.xhtml#a9b2a183cd94c03a9aabe10c89e73648b',·1,·'gmx::SelectionPosition']]], | 171 | ····['mappedid_122',·['mappedId',·['../classgmx_1_1SelectionPosition.xhtml#a9b2a183cd94c03a9aabe10c89e73648b',·1,·'gmx::SelectionPosition']]], |
172 | ····['mappedids_123',·['mappedIds',·['../classgmx_1_1Selection.xhtml#a44d2c2cd4db4eade34cac95f5916a2a0',·1,·'gmx::Selection']]], | 172 | ····['mappedids_123',·['mappedIds',·['../classgmx_1_1Selection.xhtml#a44d2c2cd4db4eade34cac95f5916a2a0',·1,·'gmx::Selection']]], |
173 | ····['mappedunionfinder_124',·['MappedUnionFinder',·['../classgmx_1_1MappedUnionFinder.xhtml',·1,·'gmx']]], | 173 | ····['mappedunionfinder_124',·['MappedUnionFinder',·['../classgmx_1_1MappedUnionFinder.xhtml',·1,·'gmx']]], |
174 | ····['mapping_125',·['mapping',·['../classgmx_1_1layout__right_1_1mapping.xhtml',·1,·'gmx::layout_right::mapping<·Extents·>'], | ||
174 | ···· | 175 | ········['../classgmx_1_1layout__right_1_1mapping.xhtml#ad632683c77288c28df614ea7915917ce',·1,·'gmx::layout_right::mapping::mapping()'], |
176 | ········['../classgmx_1_1basic__mdspan.xhtml#a02c710cacde0166f1c5f4c67b9971cee',·1,·'gmx::basic_mdspan::mapping()'], | ||
175 | ········['../classgmx_1_1layout__right_1_1mapping.xhtml#a7aa3312a770a6a3946d60a7e23cb2002',·1,·'gmx::layout_right::mapping::mapping(const·Extents·&ext)·noexcept'], | 177 | ········['../classgmx_1_1layout__right_1_1mapping.xhtml#a7aa3312a770a6a3946d60a7e23cb2002',·1,·'gmx::layout_right::mapping::mapping(const·Extents·&ext)·noexcept'], |
176 | ········['../classgmx_1_1layout__right_1_1mapping.xhtml#a80905ecdaf35273d7f7c303e7d2ff909',·1,·'gmx::layout_right::mapping::mapping()·noexcept=default'], | ||
177 | ········['../classgmx_1_1layout__right_1_1mapping.xhtml#afc7b2299be673f6d37d0a570e061da72',·1,·'gmx::layout_right::mapping::mapping(mapping·&&)·noexcept=default'], | 178 | ········['../classgmx_1_1layout__right_1_1mapping.xhtml#afc7b2299be673f6d37d0a570e061da72',·1,·'gmx::layout_right::mapping::mapping(mapping·&&)·noexcept=default'], |
179 | ········['../classgmx_1_1layout__right_1_1mapping.xhtml#a80905ecdaf35273d7f7c303e7d2ff909',·1,·'gmx::layout_right::mapping::mapping()·noexcept=default'] | ||
178 | ········['../classgmx_1_1basic__mdspan.xhtml#a02c710cacde0166f1c5f4c67b9971cee',·1,·'gmx::basic_mdspan::mapping()'], | ||
179 | ········['../classgmx_1_1layout__right_1_1mapping.xhtml',·1,·'gmx::layout_right::mapping<·Extents·>'] | ||
180 | ····]], | 180 | ····]], |
181 | ····['mapping_5ftype_126',·['mapping_type',·['../classgmx_1_1basic__mdspan.xhtml#a41c0126e07c9b922b4b838b578af7888',·1,·'gmx::basic_mdspan']]], | 181 | ····['mapping_5ftype_126',·['mapping_type',·['../classgmx_1_1basic__mdspan.xhtml#a41c0126e07c9b922b4b838b578af7888',·1,·'gmx::basic_mdspan']]], |
182 | ····['maptoframeatoms_5f_127',·['mapToFrameAtoms_',·['../classgmx_1_1PositionCalculationCollection_1_1Impl.xhtml#a028b638ac6bf4c5c76f4c78819d94cff',·1,·'gmx::PositionCalculationCollection::Impl']]], | 182 | ····['maptoframeatoms_5f_127',·['mapToFrameAtoms_',·['../classgmx_1_1PositionCalculationCollection_1_1Impl.xhtml#a028b638ac6bf4c5c76f4c78819d94cff',·1,·'gmx::PositionCalculationCollection::Impl']]], |
183 | ····['maptype_128',·['MapType',·['../classgmx_1_1EnergyFrame.xhtml#ae7cbc6aabfeacd2447563d8f137045f4',·1,·'gmx::EnergyFrame']]], | 183 | ····['maptype_128',·['MapType',·['../classgmx_1_1EnergyFrame.xhtml#ae7cbc6aabfeacd2447563d8f137045f4',·1,·'gmx::EnergyFrame']]], |
184 | ····['mark_5fsubexpr_5fdynamic_129',·['mark_subexpr_dynamic',·['../compiler_8cpp.xhtml#a2ce676e6caff3877910cd9cfc27cb955',·1,·'compiler.cpp']]], | 184 | ····['mark_5fsubexpr_5fdynamic_129',·['mark_subexpr_dynamic',·['../compiler_8cpp.xhtml#a2ce676e6caff3877910cd9cfc27cb955',·1,·'compiler.cpp']]], |
185 | ····['mark_5fsurface_5fcovered_130',·['mark_surface_covered',·['../sm__insolidangle_8cpp.xhtml#ad016ba6ae3e4a77948222f08f4004e4f',·1,·'sm_insolidangle.cpp']]], | 185 | ····['mark_5fsurface_5fcovered_130',·['mark_surface_covered',·['../sm__insolidangle_8cpp.xhtml#ad016ba6ae3e4a77948222f08f4004e4f',·1,·'sm_insolidangle.cpp']]], |
186 | ····['markasreadytoreduce_131',·['markAsReadyToReduce',·['../classgmx_1_1ObservablesReducer.xhtml#aa76fb912aca1c30275e567685626f515',·1,·'gmx::ObservablesReducer']]], | 186 | ····['markasreadytoreduce_131',·['markAsReadyToReduce',·['../classgmx_1_1ObservablesReducer.xhtml#aa76fb912aca1c30275e567685626f515',·1,·'gmx::ObservablesReducer']]], |
Offset 191, 51 lines modified | Offset 191, 51 lines modified | ||
191 | ····]], | 191 | ····]], |
192 | ····['mask_135',·['mask',·['../classgmx_1_1test_1_1AllocatorTest.xhtml#a3b860b1af26fe4dce4d932a100a1d1ab',·1,·'gmx::test::AllocatorTest']]], | 192 | ····['mask_135',·['mask',·['../classgmx_1_1test_1_1AllocatorTest.xhtml#a3b860b1af26fe4dce4d932a100a1d1ab',·1,·'gmx::test::AllocatorTest']]], |
193 | ····['maskadd_136',·['maskadd',·['../namespacegmx.xhtml#a68b090d0e3ab5695c508453406ee43c8',·1,·'gmx::maskAdd(double·a,·double·b,·double·m)'], | 193 | ····['maskadd_136',·['maskadd',·['../namespacegmx.xhtml#a68b090d0e3ab5695c508453406ee43c8',·1,·'gmx::maskAdd(double·a,·double·b,·double·m)'], |
194 | ········['../namespacegmx.xhtml#a0178a127dde331652ab015323ae622f2',·1,·'gmx::maskAdd(float·a,·float·b,·float·m)'], | 194 | ········['../namespacegmx.xhtml#a0178a127dde331652ab015323ae622f2',·1,·'gmx::maskAdd(float·a,·float·b,·float·m)'], |
195 | ········['../group__module__simd.xhtml#ga766a313a4a158cfcb0eed0373dd82dfc',·1,·'gmx::maskAdd(SimdFloat·a,·SimdFloat·b,·SimdFBool·m)'], | 195 | ········['../group__module__simd.xhtml#ga766a313a4a158cfcb0eed0373dd82dfc',·1,·'gmx::maskAdd(SimdFloat·a,·SimdFloat·b,·SimdFBool·m)'], |
196 | ········['../group__module__simd.xhtml#gadab86e04bd62248ab68039d8983a9206',·1,·'gmx::maskAdd(SimdDouble·a,·SimdDouble·b,·SimdDBool·m)'] | 196 | ········['../group__module__simd.xhtml#gadab86e04bd62248ab68039d8983a9206',·1,·'gmx::maskAdd(SimdDouble·a,·SimdDouble·b,·SimdDBool·m)'] |
197 | ····]], | 197 | ····]], |
198 | ····['maskarray_137',·['maskarray',·['../classgmx_1_1DiagonalMasker_3_01nR_00_01kernelLayout_00_01KernelLayoutClusterRatio_1_1JSizeIsHalfISize_01_4.xhtml#aa09948a382ac9009e878a3bf5081abd5',·1,·'gmx::DiagonalMasker<·nR,·kernelLayout,·KernelLayoutClusterRatio::JSizeIsHalfISize·>::maskArray()'], | ||
198 | ···· | 199 | ········['../classgmx_1_1DiagonalMasker_3_01nR_00_01kernelLayout_00_01KernelLayoutClusterRatio_1_1JSizeEqualsISize_01_4.xhtml#a42fcf1ef011c98c6dca2d5fb14a4ff53',·1,·'gmx::DiagonalMasker<·nR,·kernelLayout,·KernelLayoutClusterRatio::JSizeEqualsISize·>::maskArray()'], |
199 | ········['../classgmx_1_1DiagonalMasker_3_01nR_00_01kernelLayout_00_01KernelLayoutClusterRatio_1_1JSizeIsDoubleISize_01_4.xhtml#a45e2188c94bad5c65ddfbf1802dd7a81',·1,·'gmx::DiagonalMasker<·nR,·kernelLayout,·KernelLayoutClusterRatio::JSizeIsDoubleISize·>::maskArray()'] | 200 | ········['../classgmx_1_1DiagonalMasker_3_01nR_00_01kernelLayout_00_01KernelLayoutClusterRatio_1_1JSizeIsDoubleISize_01_4.xhtml#a45e2188c94bad5c65ddfbf1802dd7a81',·1,·'gmx::DiagonalMasker<·nR,·kernelLayout,·KernelLayoutClusterRatio::JSizeIsDoubleISize·>::maskArray()'] |
200 | ········['../classgmx_1_1DiagonalMasker_3_01nR_00_01kernelLayout_00_01KernelLayoutClusterRatio_1_1JSizeIsHalfISize_01_4.xhtml#aa09948a382ac9009e878a3bf5081abd5',·1,·'gmx::DiagonalMasker<·nR,·kernelLayout,·KernelLayoutClusterRatio::JSizeIsHalfISize·>::maskArray()'] | ||
201 | ····]], | 201 | ····]], |
202 | ····['maskzfma_138',·['maskzfma',·['../group__module__simd.xhtml#gaaa689a6c17b1d60d62b6fcd51daa7639',·1,·'gmx::maskzFma(SimdDouble·a,·SimdDouble·b,·SimdDouble·c,·SimdDBool·m)'], | 202 | ····['maskzfma_138',·['maskzfma',·['../group__module__simd.xhtml#gaaa689a6c17b1d60d62b6fcd51daa7639',·1,·'gmx::maskzFma(SimdDouble·a,·SimdDouble·b,·SimdDouble·c,·SimdDBool·m)'], |
203 | ········['../namespacegmx.xhtml#aa3cf4eaad108887d2462f5beecd4db62',·1,·'gmx::maskzFma(double·a,·double·b,·double·c,·double·m)'], | ||
204 | ········['../group__module__simd.xhtml#gac21c886b9883657fd67d8b48e784af2d',·1,·'gmx::maskzFma(SimdFloat·a,·SimdFloat·b,·SimdFloat·c,·SimdFBool·m)'], | 203 | ········['../group__module__simd.xhtml#gac21c886b9883657fd67d8b48e784af2d',·1,·'gmx::maskzFma(SimdFloat·a,·SimdFloat·b,·SimdFloat·c,·SimdFBool·m)'], |
205 | ········['../namespacegmx.xhtml#a8151e61ef06e30e360c03bba6fb5e2ab',·1,·'gmx::maskzFma(float·a,·float·b,·float·c,·float·m)'] | 204 | ········['../namespacegmx.xhtml#a8151e61ef06e30e360c03bba6fb5e2ab',·1,·'gmx::maskzFma(float·a,·float·b,·float·c,·float·m)'], |
205 | ········['../namespacegmx.xhtml#aa3cf4eaad108887d2462f5beecd4db62',·1,·'gmx::maskzFma(double·a,·double·b,·double·c,·double·m)'] | ||
206 | ····]], | 206 | ····]], |
207 | ····['maskzinv_139',·['maskzinv',·['../namespacegmx.xhtml#a582d71ff8e7d51cbd2386e29935e89ef',·1,·'gmx::maskzInv(float·x,·bool·m)'], | 207 | ····['maskzinv_139',·['maskzinv',·['../namespacegmx.xhtml#a582d71ff8e7d51cbd2386e29935e89ef',·1,·'gmx::maskzInv(float·x,·bool·m)'], |
208 | ········['../namespacegmx.xhtml#af5cc89f64ab845f88816a9cbb16d467c',·1,·'gmx::maskzInv(double·x,·bool·m)'] | 208 | ········['../namespacegmx.xhtml#af5cc89f64ab845f88816a9cbb16d467c',·1,·'gmx::maskzInv(double·x,·bool·m)'] |
209 | ····]], | 209 | ····]], |
210 | ····['maskzinvsingleaccuracy_140',·['maskzInvSingleAccuracy',·['../namespacegmx.xhtml#a2433c82892495a73bf41de15f5e8908f',·1,·'gmx']]], | 210 | ····['maskzinvsingleaccuracy_140',·['maskzInvSingleAccuracy',·['../namespacegmx.xhtml#a2433c82892495a73bf41de15f5e8908f',·1,·'gmx']]], |
211 | ····['maskzinvsqrt_141',·['maskzinvsqrt',·['../namespacegmx.xhtml#aa5b5a9766964a2b854f493fd783bb63d',·1,·'gmx::maskzInvsqrt(double·x,·bool·m)'], | 211 | ····['maskzinvsqrt_141',·['maskzinvsqrt',·['../namespacegmx.xhtml#aa5b5a9766964a2b854f493fd783bb63d',·1,·'gmx::maskzInvsqrt(double·x,·bool·m)'], |
212 | ········['../namespacegmx.xhtml#aa182f9ceead92b3055e6ae5903994651',·1,·'gmx::maskzInvsqrt(float·x,·bool·m)'] | 212 | ········['../namespacegmx.xhtml#aa182f9ceead92b3055e6ae5903994651',·1,·'gmx::maskzInvsqrt(float·x,·bool·m)'] |
213 | ····]], | 213 | ····]], |
214 | ····['maskzinvsqrtsingleaccuracy_142',·['maskzInvsqrtSingleAccuracy',·['../namespacegmx.xhtml#a1fdaf91102db0bfbc6fd440524b15199',·1,·'gmx']]], | 214 | ····['maskzinvsqrtsingleaccuracy_142',·['maskzInvsqrtSingleAccuracy',·['../namespacegmx.xhtml#a1fdaf91102db0bfbc6fd440524b15199',·1,·'gmx']]], |
215 | ····['maskzmul_143',·['maskzmul',·['../namespacegmx.xhtml#a7e4ab8b1ab046ff242d32ab93366bfde',·1,·'gmx::maskzMul(double·a,·double·b,·double·m)'], | 215 | ····['maskzmul_143',·['maskzmul',·['../namespacegmx.xhtml#a7e4ab8b1ab046ff242d32ab93366bfde',·1,·'gmx::maskzMul(double·a,·double·b,·double·m)'], |
216 | ········['../namespacegmx.xhtml#a1e3c4084e25d298f95003df8e9aeffa1',·1,·'gmx::maskzMul(float·a,·float·b,·float·m)'], | 216 | ········['../namespacegmx.xhtml#a1e3c4084e25d298f95003df8e9aeffa1',·1,·'gmx::maskzMul(float·a,·float·b,·float·m)'], |
217 | ········['../group__module__simd.xhtml#gaa732ce9ab59cca63f834923a8cb4c775',·1,·'gmx::maskzMul(SimdFloat·a,·SimdFloat·b,·SimdFBool·m)'], | 217 | ········['../group__module__simd.xhtml#gaa732ce9ab59cca63f834923a8cb4c775',·1,·'gmx::maskzMul(SimdFloat·a,·SimdFloat·b,·SimdFBool·m)'], |
218 | ········['../group__module__simd.xhtml#gafb416d879be4463f38af9b670583fd65',·1,·'gmx::maskzMul(SimdDouble·a,·SimdDouble·b,·SimdDBool·m)'] | 218 | ········['../group__module__simd.xhtml#gafb416d879be4463f38af9b670583fd65',·1,·'gmx::maskzMul(SimdDouble·a,·SimdDouble·b,·SimdDBool·m)'] |
219 | ····]], | 219 | ····]], |
220 | ····['maskzrcp_144',·['maskzrcp',·['../namespacegmx.xhtml#a46aa2887b65705f41a4f99028391e06d',·1,·'gmx::maskzRcp(double·x,·double·m)'], | ||
221 | ····· | 220 | ····['maskzrcp_144',·['maskzrcp',·['../namespacegmx.xhtml#a5e2078ca9735b86c8414dc80273c330f',·1,·'gmx::maskzRcp(float·x,·float·m)'], |
222 | ········['../group__module__simd.xhtml#gabda785f716b1445f709fc7aa028c0589',·1,·'gmx::maskzRcp(SimdFloat·x,·SimdFBool·m)'], | ||
223 | ········['../group__module__simd.xhtml#ga0f425368efd0895189b0e11d4b5d4ccc',·1,·'gmx::maskzRcp(SimdDouble·x,·SimdDBool·m)'] | 221 | ········['../group__module__simd.xhtml#ga0f425368efd0895189b0e11d4b5d4ccc',·1,·'gmx::maskzRcp(SimdDouble·x,·SimdDBool·m)'], |
222 | ········['../namespacegmx.xhtml#a46aa2887b65705f41a4f99028391e06d',·1,·'gmx::maskzRcp(double·x,·double·m)'], | ||
223 | ········['../group__module__simd.xhtml#gabda785f716b1445f709fc7aa028c0589',·1,·'gmx::maskzRcp(SimdFloat·x,·SimdFBool·m)'] | ||
224 | ····]], | 224 | ····]], |
225 | ····['maskzrsqrt_145',·['maskzrsqrt',·['../group__module__simd.xhtml#ga6eb1ba8851b08ceea1c160b6b255ee9b',·1,·'gmx::maskzRsqrt(SimdFloat·x,·SimdFBool·m)'], | ||
226 | ····· | 225 | ····['maskzrsqrt_145',·['maskzrsqrt',·['../group__module__simd.xhtml#ga3bbc24d75706e7515afc2f2071f1a469',·1,·'gmx::maskzRsqrt(SimdDouble·x,·SimdDBool·m)'], |
226 | ········['../group__module__simd.xhtml#ga6eb1ba8851b08ceea1c160b6b255ee9b',·1,·'gmx::maskzRsqrt(SimdFloat·x,·SimdFBool·m)'] | ||
227 | ····]], | 227 | ····]], |
228 | ····['mass_146',·['mass',·['../namespacegmx.xhtml#ab0ad78613a262a1d4fcce5d18525099faff2864d6f652ee0ac254814f1ae4f4a8',·1,·'gmx::Mass'], | ||
228 | ···· | 229 | ········['../structgmx_1_1analysismodules_1_1anonymous__namespace_02msd_8cpp_03_1_1MoleculeData.xhtml#a905e6d6ed76e407661419ade98690710',·1,·'gmx::analysismodules::anonymous_namespace{msd.cpp}::MoleculeData::mass'], |
229 | ········['../classgmx_1_1SelectionPosition.xhtml#ad0d89cf9872c5209484b47af5a829169',·1,·'gmx::SelectionPosition::mass()'], | ||
230 | ········['../structSystemMomentum.xhtml#a28f63449530903c6d45c9bb6051e545a',·1,·'SystemMomentum::mass'], | 230 | ········['../structSystemMomentum.xhtml#a28f63449530903c6d45c9bb6051e545a',·1,·'SystemMomentum::mass'], |
231 | ········['../ | 231 | ········['../classgmx_1_1SelectionPosition.xhtml#ad0d89cf9872c5209484b47af5a829169',·1,·'gmx::SelectionPosition::mass()'] |
232 | ····]], | 232 | ····]], |
233 | ····['masses_147',·['masses',·['../classgmx_1_1Selection.xhtml#aca468745670b88b10b2adcce026ae259',·1,·'gmx::Selection::masses()'], | ||
233 | ···· | 234 | ········['../structgmx_1_1SelectionTopologyProperties.xhtml#a2996520d03806582978001bd420e8787',·1,·'gmx::SelectionTopologyProperties::masses()'] |
234 | ········['../classgmx_1_1Selection.xhtml#aca468745670b88b10b2adcce026ae259',·1,·'gmx::Selection::masses()'] | ||
235 | ····]], | 235 | ····]], |
236 | ····['match_148',·['match',·['../structBondedInteraction.xhtml#a7c2a0f65b8629737b28b2ec2891f0d00',·1,·'BondedInteraction::match'], | 236 | ····['match_148',·['match',·['../structBondedInteraction.xhtml#a7c2a0f65b8629737b28b2ec2891f0d00',·1,·'BondedInteraction::match'], |
237 | ········['../classanonymous__namespace_02sm__keywords_8cpp_03_1_1StringKeywordMatchItem.xhtml#a6f1a3d7a7873a1846048563c1faac40d',·1,·'anonymous_namespace{sm_keywords.cpp}::StringKeywordMatchItem::match()'] | 237 | ········['../classanonymous__namespace_02sm__keywords_8cpp_03_1_1StringKeywordMatchItem.xhtml#a6f1a3d7a7873a1846048563c1faac40d',·1,·'anonymous_namespace{sm_keywords.cpp}::StringKeywordMatchItem::match()'] |
238 | ····]], | 238 | ····]], |
239 | ····['matchandexplain_149',·['matchandexplain',·['../classgmx_1_1test_1_1RVecMatcher.xhtml#a2ae2928ffa1a58e85a278ed34b7c906c',·1,·'gmx::test::RVecMatcher::MatchAndExplain()'], | 239 | ····['matchandexplain_149',·['matchandexplain',·['../classgmx_1_1test_1_1RVecMatcher.xhtml#a2ae2928ffa1a58e85a278ed34b7c906c',·1,·'gmx::test::RVecMatcher::MatchAndExplain()'], |
240 | ········['../classgmx_1_1test_1_1FloatTypeMatcher.xhtml#a10d67b5a0da6c21ae1e1df339000be52',·1,·'gmx::test::FloatTypeMatcher::MatchAndExplain()'] | 240 | ········['../classgmx_1_1test_1_1FloatTypeMatcher.xhtml#a10d67b5a0da6c21ae1e1df339000be52',·1,·'gmx::test::FloatTypeMatcher::MatchAndExplain()'] |
241 | ····]], | 241 | ····]], |
Offset 254, 50 lines modified | Offset 254, 50 lines modified | ||
254 | ········['../namespacegmx.xhtml#a8065c9cfb460c40c3c2699c728ecd3f4',·1,·'gmx::Matrix3x3'] | 254 | ········['../namespacegmx.xhtml#a8065c9cfb460c40c3c2699c728ecd3f4',·1,·'gmx::Matrix3x3'] |
255 | ····]], | 255 | ····]], |
256 | ····['matrix3x3constspan_160',·['Matrix3x3ConstSpan',·['../namespacegmx.xhtml#a589179a4042893247bfe78e630ee381f',·1,·'gmx']]], | 256 | ····['matrix3x3constspan_160',·['Matrix3x3ConstSpan',·['../namespacegmx.xhtml#a589179a4042893247bfe78e630ee381f',·1,·'gmx']]], |
257 | ····['matrix3x3span_161',·['Matrix3x3Span',·['../namespacegmx.xhtml#a42b7945e249b8dd5a00cd733e679c2a9',·1,·'gmx']]], | 257 | ····['matrix3x3span_161',·['Matrix3x3Span',·['../namespacegmx.xhtml#a42b7945e249b8dd5a00cd733e679c2a9',·1,·'gmx']]], |
258 | ····['matrix_5f_162',·['matrix_',·['../structgmx_1_1MrcDensitySkewData.xhtml#a8be1bb72413e6a66562f7fa3d2624d3f',·1,·'gmx::MrcDensitySkewData']]], | 258 | ····['matrix_5f_162',·['matrix_',·['../structgmx_1_1MrcDensitySkewData.xhtml#a8be1bb72413e6a66562f7fa3d2624d3f',·1,·'gmx::MrcDensitySkewData']]], |
259 | ····['matrix_5fconvert_163',·['matrix_convert',·['../pbc_8cpp.xhtml#aec6c71950b4b9e1c90429eff68ea4168',·1,·'pbc.cpp']]], | 259 | ····['matrix_5fconvert_163',·['matrix_convert',·['../pbc_8cpp.xhtml#aec6c71950b4b9e1c90429eff68ea4168',·1,·'pbc.cpp']]], |
260 | ····['matrixvectormultiply_164',·['matrixVectorMultiply',·['../namespacegmx.xhtml#a2f6cbfad1dad185c82ec9bee081833c5',·1,·'gmx']]], | 260 | ····['matrixvectormultiply_164',·['matrixVectorMultiply',·['../namespacegmx.xhtml#a2f6cbfad1dad185c82ec9bee081833c5',·1,·'gmx']]], |
261 | ····['max_165',·['max',·['../group__module__simd.xhtml#ga68bbfb58d0ab7d2362d0efde15c14ca3',·1,·'gmx::max()'], | ||
261 | ····['max_165',·['max',·['../classgmx_1_1UniformRealDistribution.xhtml#abf888030231e57e8c412cecd63f70f78',·1,·'gmx::UniformRealDistribution::max()'], | ||
262 | ········['../group__module__simd.xhtml#ga4edeef3c458f5c77cf3ceb80532a57ff',·1,·'gmx::max(SimdFloat·a,·SimdFloat·b)'], | ||
263 | ········['../namespacegmx.xhtml#a35c7b010fbd32f5424afa0de0c70db6f',·1,·'gmx::max(float·a,·float·b)'], | ||
264 | ········['../namespacegmx.xhtml#a16f6bf4a20b14262f28168596d5bb8b9',·1,·'gmx::max(double·a,·double·b)'], | ||
265 | ········['../classgmx_1_1UniformIntDistribution.xhtml#af3bf0caf1c448e8f298a0d2b60b34733',·1,·'gmx::UniformIntDistribution::max()'], | 262 | ········['../classgmx_1_1UniformIntDistribution.xhtml#af3bf0caf1c448e8f298a0d2b60b34733',·1,·'gmx::UniformIntDistribution::max()'], |
266 | ········['../classgmx_1_1ThreeFry2x64General.xhtml#a747866a072cff89a20b8f58621ae4bc5',·1,·'gmx::ThreeFry2x64General::max()'], | 263 | ········['../classgmx_1_1ThreeFry2x64General.xhtml#a747866a072cff89a20b8f58621ae4bc5',·1,·'gmx::ThreeFry2x64General::max()'], |
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520 | ········['../structgmx_1_1PTCouplingArrays.xhtml#a6af6f95f1d4a30e290f6b724f0a313af',·1,·'gmx::PTCouplingArrays::nosehoover_vxi'] | 520 | ········['../structgmx_1_1PTCouplingArrays.xhtml#a6af6f95f1d4a30e290f6b724f0a313af',·1,·'gmx::PTCouplingArrays::nosehoover_vxi'] |
521 | ····]], | 521 | ····]], |
522 | ····['nosehoover_5fxi_316',·['nosehoover_xi',·['../structgmx_1_1PTCouplingArrays.xhtml#a611790ef9fc3907feed3c81b1c29b1db',·1,·'gmx::PTCouplingArrays::nosehoover_xi'], | 522 | ····['nosehoover_5fxi_316',·['nosehoover_xi',·['../structgmx_1_1PTCouplingArrays.xhtml#a611790ef9fc3907feed3c81b1c29b1db',·1,·'gmx::PTCouplingArrays::nosehoover_xi'], |
Offset 1, 16 lines modified | Offset 1, 16 lines modified | ||
1 | var·searchData·=·[ | 1 | var·searchData·=·[ |
2 | ····['o_0',·['O',·['../structt__bb.xhtml#a5b3ca2cbf9e06eb431db389e0962261f',·1,·'t_bb']]], | 2 | ····['o_0',·['O',·['../structt__bb.xhtml#a5b3ca2cbf9e06eb431db389e0962261f',·1,·'t_bb']]], |
3 | ····['objecthasdistinctproperties_1',·['objectHasDistinctProperties',·['../classgmx_1_1KeyValueTreeObjectBuilder.xhtml#a45943895f07e4ef6e86d31917c2f1c93',·1,·'gmx::KeyValueTreeObjectBuilder']]], | 3 | ····['objecthasdistinctproperties_1',·['objectHasDistinctProperties',·['../classgmx_1_1KeyValueTreeObjectBuilder.xhtml#a45943895f07e4ef6e86d31917c2f1c93',·1,·'gmx::KeyValueTreeObjectBuilder']]], |
4 | ····['observableshistory_2',·['ObservablesHistory',·['../structObservablesHistory.xhtml',·1,·'']]], | 4 | ····['observableshistory_2',·['ObservablesHistory',·['../structObservablesHistory.xhtml',·1,·'']]], |
5 | ····['observableshistory_2eh_3',·['observableshistory.h',·['../observableshistory_8h.xhtml',·1,·'']]], | 5 | ····['observableshistory_2eh_3',·['observableshistory.h',·['../observableshistory_8h.xhtml',·1,·'']]], |
6 | ····['observableshistory_5f_4',·['observablesHistory_',·['../classgmx_1_1LegacySimulatorData.xhtml#a4faef9cbf9bfe9485c7390c5418f050f',·1,·'gmx::LegacySimulatorData']]], | 6 | ····['observableshistory_5f_4',·['observablesHistory_',·['../classgmx_1_1LegacySimulatorData.xhtml#a4faef9cbf9bfe9485c7390c5418f050f',·1,·'gmx::LegacySimulatorData']]], |
7 | ····['observableshistory_5fp_5',·['observablesHistory_p',·['../structgmx_1_1SimulatorStateData.xhtml#abb32159644e59e584ee3fb040f7c3f7c',·1,·'gmx::SimulatorStateData']]], | 7 | ····['observableshistory_5fp_5',·['observablesHistory_p',·['../structgmx_1_1SimulatorStateData.xhtml#abb32159644e59e584ee3fb040f7c3f7c',·1,·'gmx::SimulatorStateData']]], |
8 | ····['observablesreducer_6',·['observablesreducer',·['../classanonymous__namespace_02minimize_8cpp_03_1_1EnergyEvaluator.xhtml#aa056e4b8442549d4385116a2cd504854',·1,·'anonymous_namespace{minimize.cpp}::EnergyEvaluator::observablesReducer'], | ||
8 | ···· | 9 | ········['../structgmx_1_1test_1_1anonymous__namespace_02observablesreducer_8cpp_03_1_1ObservablesReducerIntegrationTest_1_1RankData.xhtml#ac31dd7d96b13afe86a272f2bb3f364ed',·1,·'gmx::test::anonymous_namespace{observablesreducer.cpp}::ObservablesReducerIntegrationTest::RankData::observablesReducer'], |
9 | ········['../classanonymous__namespace_02minimize_8cpp_03_1_1EnergyEvaluator.xhtml#aa056e4b8442549d4385116a2cd504854',·1,·'anonymous_namespace{minimize.cpp}::EnergyEvaluator::observablesReducer'], | ||
10 | ········['../classgmx_1_1ObservablesReducer.xhtml#ad4573de5d1f9236c267e238f6d0670f3',·1,·'gmx::ObservablesReducer::ObservablesReducer()'], | 10 | ········['../classgmx_1_1ObservablesReducer.xhtml#ad4573de5d1f9236c267e238f6d0670f3',·1,·'gmx::ObservablesReducer::ObservablesReducer()'], |
11 | ········['../classgmx_1_1ObservablesReducer.xhtml',·1,·'gmx::ObservablesReducer'], | 11 | ········['../classgmx_1_1ObservablesReducer.xhtml',·1,·'gmx::ObservablesReducer'], |
12 | ········['../classgmx_1_1ObservablesReducer.xhtml#a5da6d3ce3cfa1091b54b98af15dbb5ed',·1,·'gmx::ObservablesReducer::ObservablesReducer()'] | 12 | ········['../classgmx_1_1ObservablesReducer.xhtml#a5da6d3ce3cfa1091b54b98af15dbb5ed',·1,·'gmx::ObservablesReducer::ObservablesReducer()'] |
13 | ····]], | 13 | ····]], |
14 | ····['observablesreducer_2ecpp_7',·['observablesreducer.cpp',·['../observablesreducer_8cpp.xhtml',·1,·'(Global·Namespace)'], | 14 | ····['observablesreducer_2ecpp_7',·['observablesreducer.cpp',·['../observablesreducer_8cpp.xhtml',·1,·'(Global·Namespace)'], |
15 | ········['../tests_2observablesreducer_8cpp.xhtml',·1,·'(Global·Namespace)'] | 15 | ········['../tests_2observablesreducer_8cpp.xhtml',·1,·'(Global·Namespace)'] |
16 | ····]], | 16 | ····]], |
Offset 62, 17 lines modified | Offset 62, 17 lines modified | ||
62 | ····['of_20output_20data_20analysisdata_37',·['Parallelizable·Handling·of·Output·Data·(analysisdata)',·['../group__module__analysisdata.xhtml',·1,·'']]], | 62 | ····['of_20output_20data_20analysisdata_37',·['Parallelizable·Handling·of·Output·Data·(analysisdata)',·['../group__module__analysisdata.xhtml',·1,·'']]], |
63 | ····['of_20packed_20j_20clusters_20of_20warps_38',·['of·packed·j·clusters·*·#·of·warps',·['../structNbnxm_1_1gpu__plist.xhtml#autotoc_md108',·1,·'']]], | 63 | ····['of_20packed_20j_20clusters_20of_20warps_38',·['of·packed·j·clusters·*·#·of·warps',·['../structNbnxm_1_1gpu__plist.xhtml#autotoc_md108',·1,·'']]], |
64 | ····['of_20particles_39',·['Interactions·between·lists·of·particles',·['../group__module__listed__forces.xhtml',·1,·'']]], | 64 | ····['of_20particles_39',·['Interactions·between·lists·of·particles',·['../group__module__listed__forces.xhtml',·1,·'']]], |
65 | ····['of_20the_20awh_20module_40',·['Design·of·the·AWH·module',·['../page_awh.xhtml#autotoc_md1',·1,·'']]], | 65 | ····['of_20the_20awh_20module_40',·['Design·of·the·AWH·module',·['../page_awh.xhtml#autotoc_md1',·1,·'']]], |
66 | ····['of_20the_20gromacs_20simd_20module_41',·['Design·of·the·GROMACS·SIMD·module',·['../page_simd.xhtml#autotoc_md57',·1,·'']]], | 66 | ····['of_20the_20gromacs_20simd_20module_41',·['Design·of·the·GROMACS·SIMD·module',·['../page_simd.xhtml#autotoc_md57',·1,·'']]], |
67 | ····['of_20writing_20new_20coordinate_20files_42',·['Handling·of·writing·new·coordinate·files',·['../group__module__coordinateio.xhtml',·1,·'']]], | 67 | ····['of_20writing_20new_20coordinate_20files_42',·['Handling·of·writing·new·coordinate·files',·['../group__module__coordinateio.xhtml',·1,·'']]], |
68 | ····['off_43',·['Off',·['../namespacegmx.xhtml#adadf1e691df16814192e634d58c70b5ead15305d7a4e34e02489c74a5ef542f36',·1,·'gmx']]], | 68 | ····['off_43',·['Off',·['../namespacegmx.xhtml#adadf1e691df16814192e634d58c70b5ead15305d7a4e34e02489c74a5ef542f36',·1,·'gmx']]], |
69 | ····['offset_44',·['offset',·['../classgmx_1_1accessor__basic.xhtml#ab573621901f685d31c720d3a2786f8e8',·1,·'gmx::accessor_basic::offset()'], | ||
69 | ···· | 70 | ········['../group__module__modularsimulator.xhtml#ga725d42d8579eacfbccb9bb358249201d',·1,·'gmx::Offset::Offset()'], |
70 | ········['../structgmx_1_1Offset.xhtml',·1,·'gmx::Offset'] | 71 | ········['../structgmx_1_1Offset.xhtml',·1,·'gmx::Offset'] |
71 | ········['../classgmx_1_1accessor__basic.xhtml#ab573621901f685d31c720d3a2786f8e8',·1,·'gmx::accessor_basic::offset(pointer·p,·ptrdiff_t·i)·const·noexcept'] | ||
72 | ····]], | 72 | ····]], |
73 | ····['offset_5fpolicy_45',·['offset_policy',·['../classgmx_1_1accessor__basic.xhtml#a62fbe87c35deee4170f07a4673e009a2',·1,·'gmx::accessor_basic']]], | 73 | ····['offset_5fpolicy_45',·['offset_policy',·['../classgmx_1_1accessor__basic.xhtml#a62fbe87c35deee4170f07a4673e009a2',·1,·'gmx::accessor_basic']]], |
74 | ····['old_5ff_5find_46',·['old_f_ind',·['../classgmx_1_1ImdSession_1_1Impl.xhtml#aa0f6f922cb7460037606d4caa1bb0aa0',·1,·'gmx::ImdSession::Impl']]], | 74 | ····['old_5ff_5find_46',·['old_f_ind',·['../classgmx_1_1ImdSession_1_1Impl.xhtml#aa0f6f922cb7460037606d4caa1bb0aa0',·1,·'gmx::ImdSession::Impl']]], |
75 | ····['old_5fforces_47',·['old_forces',·['../classgmx_1_1ImdSession_1_1Impl.xhtml#aca2bee71e3338893fafab79154a7d554',·1,·'gmx::ImdSession::Impl']]], | 75 | ····['old_5fforces_47',·['old_forces',·['../classgmx_1_1ImdSession_1_1Impl.xhtml#aca2bee71e3338893fafab79154a7d554',·1,·'gmx::ImdSession::Impl']]], |
76 | ····['old_5fnforces_48',·['old_nforces',·['../classgmx_1_1ImdSession_1_1Impl.xhtml#a37d85e5efa25caac606bf237a4ad2caf',·1,·'gmx::ImdSession::Impl']]], | 76 | ····['old_5fnforces_48',·['old_nforces',·['../classgmx_1_1ImdSession_1_1Impl.xhtml#a37d85e5efa25caac606bf237a4ad2caf',·1,·'gmx::ImdSession::Impl']]], |
77 | ····['older_20approaches_49',·['Other·(older)·approaches',·['../page_modularsimulator.xhtml#autotoc_md44',·1,·'']]], | 77 | ····['older_20approaches_49',·['Other·(older)·approaches',·['../page_modularsimulator.xhtml#autotoc_md44',·1,·'']]], |
78 | ····['oldval_50',·['oldval',·['../classgmx_1_1AnalysisDataDisplacementModule_1_1Impl.xhtml#a2889f98625e7b90aaf20a8fe1bfc382d',·1,·'gmx::AnalysisDataDisplacementModule::Impl']]], | 78 | ····['oldval_50',·['oldval',·['../classgmx_1_1AnalysisDataDisplacementModule_1_1Impl.xhtml#a2889f98625e7b90aaf20a8fe1bfc382d',·1,·'gmx::AnalysisDataDisplacementModule::Impl']]], |
Offset 87, 16 lines modified | Offset 87, 16 lines modified | ||
87 | ····['onlyatoms_59',·['onlyAtoms',·['../classgmx_1_1SelectionOption.xhtml#a4846f760b91af13c9d9a2814e4ce1d55',·1,·'gmx::SelectionOption']]], | 87 | ····['onlyatoms_59',·['onlyAtoms',·['../classgmx_1_1SelectionOption.xhtml#a4846f760b91af13c9d9a2814e4ce1d55',·1,·'gmx::SelectionOption']]], |
88 | ····['onlysortedatoms_60',·['onlySortedAtoms',·['../classgmx_1_1SelectionOption.xhtml#a5e1ee5dcb5e9003de983cc4a1044f000',·1,·'gmx::SelectionOption']]], | 88 | ····['onlysortedatoms_60',·['onlySortedAtoms',·['../classgmx_1_1SelectionOption.xhtml#a5e1ee5dcb5e9003de983cc4a1044f000',·1,·'gmx::SelectionOption']]], |
89 | ····['onlystatic_61',·['onlyStatic',·['../classgmx_1_1SelectionOption.xhtml#a480cd0c77caa5e76be09d5ca395d534a',·1,·'gmx::SelectionOption']]], | 89 | ····['onlystatic_61',·['onlyStatic',·['../classgmx_1_1SelectionOption.xhtml#a480cd0c77caa5e76be09d5ca395d534a',·1,·'gmx::SelectionOption']]], |
90 | ····['onstep_62',·['OnStep',·['../namespacegmx.xhtml#adadf1e691df16814192e634d58c70b5ea66c375976a2f0a8ea1b7002a79b6ef8b',·1,·'gmx']]], | 90 | ····['onstep_62',·['OnStep',·['../namespacegmx.xhtml#adadf1e691df16814192e634d58c70b5ea66c375976a2f0a8ea1b7002a79b6ef8b',·1,·'gmx']]], |
91 | ····['onstepandnext_63',·['OnStepAndNext',·['../namespacegmx.xhtml#adadf1e691df16814192e634d58c70b5ea2b81bec778c7d3f443b1b7afadb3348b',·1,·'gmx']]], | 91 | ····['onstepandnext_63',·['OnStepAndNext',·['../namespacegmx.xhtml#adadf1e691df16814192e634d58c70b5ea2b81bec778c7d3f443b1b7afadb3348b',·1,·'gmx']]], |
92 | ····['ontestend_64',·['onTestEnd',·['../classgmx_1_1test_1_1internal_1_1TestReferenceDataImpl.xhtml#a00dd48380162ea142ce4d55108cb22b5',·1,·'gmx::test::internal::TestReferenceDataImpl']]], | 92 | ····['ontestend_64',·['onTestEnd',·['../classgmx_1_1test_1_1internal_1_1TestReferenceDataImpl.xhtml#a00dd48380162ea142ce4d55108cb22b5',·1,·'gmx::test::internal::TestReferenceDataImpl']]], |
93 | ····['ooplace_65',·['ooplace',·['../structgmx__fft__mkl.xhtml#a6063ea9aabe67817e0b64783a944cd44',·1,·'gmx_fft_mkl']]], | 93 | ····['ooplace_65',·['ooplace',·['../structgmx__fft__mkl.xhtml#a6063ea9aabe67817e0b64783a944cd44',·1,·'gmx_fft_mkl']]], |
94 | ····['open_5fdhdl_66',·['open_dhdl',·['../energyoutput_8 | 94 | ····['open_5fdhdl_66',·['open_dhdl',·['../energyoutput_8cpp.xhtml#ac18143d613e81608c3d21acefd4cd8f0',·1,·'open_dhdl(const·char·*filename,·const·t_inputrec·*ir,·const·gmx_output_env_t·*oenv): energyoutput.cpp'], |
95 | ········['../energyoutput_8 | 95 | ········['../energyoutput_8h.xhtml#ac18143d613e81608c3d21acefd4cd8f0',·1,·'open_dhdl(const·char·*filename,·const·t_inputrec·*ir,·const·gmx_output_env_t·*oenv): energyoutput.cpp'] |
96 | ····]], | 96 | ····]], |
97 | ····['open_5fsymtab_67',·['open_symtab',·['../symtab_8cpp.xhtml#ae00fb647f33d0a2ea330b2a3ca8e72c8',·1,·'open_symtab(t_symtab·*symtab): symtab.cpp'], | 97 | ····['open_5fsymtab_67',·['open_symtab',·['../symtab_8cpp.xhtml#ae00fb647f33d0a2ea330b2a3ca8e72c8',·1,·'open_symtab(t_symtab·*symtab): symtab.cpp'], |
98 | ········['../symtab_8h.xhtml#ae00fb647f33d0a2ea330b2a3ca8e72c8',·1,·'open_symtab(t_symtab·*symtab): symtab.cpp'] | 98 | ········['../symtab_8h.xhtml#ae00fb647f33d0a2ea330b2a3ca8e72c8',·1,·'open_symtab(t_symtab·*symtab): symtab.cpp'] |
99 | ····]], | 99 | ····]], |
100 | ····['openbeforeforcecomputationcpu_68',·['openBeforeForceComputationCpu',·['../classDDBalanceRegionHandler.xhtml#ae72e0fa2568564942a80aa13c1df6bd1',·1,·'DDBalanceRegionHandler']]], | 100 | ····['openbeforeforcecomputationcpu_68',·['openBeforeForceComputationCpu',·['../classDDBalanceRegionHandler.xhtml#ae72e0fa2568564942a80aa13c1df6bd1',·1,·'DDBalanceRegionHandler']]], |
101 | ····['openbeforeforcecomputationgpu_69',·['openBeforeForceComputationGpu',·['../classDDBalanceRegionHandler.xhtml#a5314136538ffb7bd39cc970ff054b0ca',·1,·'DDBalanceRegionHandler']]], | 101 | ····['openbeforeforcecomputationgpu_69',·['openBeforeForceComputationGpu',·['../classDDBalanceRegionHandler.xhtml#a5314136538ffb7bd39cc970ff054b0ca',·1,·'DDBalanceRegionHandler']]], |
102 | ····['openbiasoutputfile_70',·['openBiasOutputFile',·['../classOutputFile.xhtml#a09d9265cd5a6ce74728f9064b6057cf1',·1,·'OutputFile']]], | 102 | ····['openbiasoutputfile_70',·['openBiasOutputFile',·['../classOutputFile.xhtml#a09d9265cd5a6ce74728f9064b6057cf1',·1,·'OutputFile']]], |
Offset 422, 17 lines modified | Offset 422, 17 lines modified | ||
422 | ········['../classgmx_1_1ListOfLists.xhtml#acd74b039aaea684b78fc368d2b0bb289',·1,·'gmx::ListOfLists::operator[]()'], | 422 | ········['../classgmx_1_1ListOfLists.xhtml#acd74b039aaea684b78fc368d2b0bb289',·1,·'gmx::ListOfLists::operator[]()'], |
423 | ········['../structgmx_1_1EnumerationArray.xhtml#a19f0ee284d558c5158a392189af41237',·1,·'gmx::EnumerationArray::operator[]()'], | 423 | ········['../structgmx_1_1EnumerationArray.xhtml#a19f0ee284d558c5158a392189af41237',·1,·'gmx::EnumerationArray::operator[]()'], |
424 | ········['../classgmx_1_1ArrayRef.xhtml#ae5992e7e6c407d5f8fb0c08dd314b303',·1,·'gmx::ArrayRef::operator[]()'], | 424 | ········['../classgmx_1_1ArrayRef.xhtml#ae5992e7e6c407d5f8fb0c08dd314b303',·1,·'gmx::ArrayRef::operator[]()'], |
425 | ········['../classStringTable.xhtml#ad323be1b121601515ed9af457ec5ddcc',·1,·'StringTable::operator[]()'] | 425 | ········['../classStringTable.xhtml#ad323be1b121601515ed9af457ec5ddcc',·1,·'StringTable::operator[]()'] |
426 | ····]], | 426 | ····]], |
427 | ····['operator_5e_133',·['operator^',·['../group__module__simd.xhtml#ga8385ef4b8312eff3f715d2f817604e51',·1,·'gmx::operator^(Simd4Float·a,·Simd4Float·b)'], | 427 | ····['operator_5e_133',·['operator^',·['../group__module__simd.xhtml#ga8385ef4b8312eff3f715d2f817604e51',·1,·'gmx::operator^(Simd4Float·a,·Simd4Float·b)'], |
428 | ········['../group__module__simd.xhtml#gad65f7d7aa6d2a6c4b697ac0be0f3a616',·1,·'gmx::operator^(SimdDouble·a,·SimdDouble·b)'], | 428 | ········['../group__module__simd.xhtml#gad65f7d7aa6d2a6c4b697ac0be0f3a616',·1,·'gmx::operator^(SimdDouble·a,·SimdDouble·b)'], |
429 | ········['../group__module__simd.xhtml#gaba7ccd2477ecf6b07f5b7696d9490038',·1,·'gmx::operator^(SimdDInt32·a,·SimdDInt32·b)'], | ||
430 | ········['../group__module__simd.xhtml#ga37544015fbce9d2b11dce07e159e878b',·1,·'gmx::operator^(SimdFloat·a,·SimdFloat·b)'], | 429 | ········['../group__module__simd.xhtml#ga37544015fbce9d2b11dce07e159e878b',·1,·'gmx::operator^(SimdFloat·a,·SimdFloat·b)'], |
431 | ········['../group__module__simd.xhtml#gabb7e81f2ef83cfb9aaae088c8762c2b0',·1,·'gmx::operator^(SimdFInt32·a,·SimdFInt32·b)'], | 430 | ········['../group__module__simd.xhtml#gabb7e81f2ef83cfb9aaae088c8762c2b0',·1,·'gmx::operator^(SimdFInt32·a,·SimdFInt32·b)'], |
431 | ········['../group__module__simd.xhtml#gaba7ccd2477ecf6b07f5b7696d9490038',·1,·'gmx::operator^(SimdDInt32·a,·SimdDInt32·b)'], | ||
432 | ········['../group__module__simd.xhtml#gaad7bb7baf5edd91a8707584c9cdc086e',·1,·'gmx::operator^(Simd4Double·a,·Simd4Double·b)'] | 432 | ········['../group__module__simd.xhtml#gaad7bb7baf5edd91a8707584c9cdc086e',·1,·'gmx::operator^(Simd4Double·a,·Simd4Double·b)'] |
433 | ····]], | 433 | ····]], |
434 | ····['operator_7c_134',·['operator|',·['../group__module__simd.xhtml#ga65d3eb9cd43b33b4665dfe676c0e79d2',·1,·'gmx::operator|(SimdDInt32·a,·SimdDInt32·b)'], | 434 | ····['operator_7c_134',·['operator|',·['../group__module__simd.xhtml#ga65d3eb9cd43b33b4665dfe676c0e79d2',·1,·'gmx::operator|(SimdDInt32·a,·SimdDInt32·b)'], |
435 | ········['../group__module__simd.xhtml#gaf6f2042babc63e1b20b08ed61d859f74',·1,·'gmx::operator|(SimdFInt32·a,·SimdFInt32·b)'], | 435 | ········['../group__module__simd.xhtml#gaf6f2042babc63e1b20b08ed61d859f74',·1,·'gmx::operator|(SimdFInt32·a,·SimdFInt32·b)'], |
436 | ········['../group__module__simd.xhtml#ga69973d1808eb0e8e60715d3abf01cd22',·1,·'gmx::operator|(SimdFloat·a,·SimdFloat·b)'], | 436 | ········['../group__module__simd.xhtml#ga69973d1808eb0e8e60715d3abf01cd22',·1,·'gmx::operator|(SimdFloat·a,·SimdFloat·b)'], |
437 | ········['../group__module__simd.xhtml#ga72cbfbcd5395b355e242f2ef4284f5c5',·1,·'gmx::operator|(SimdDouble·a,·SimdDouble·b)'], | 437 | ········['../group__module__simd.xhtml#ga72cbfbcd5395b355e242f2ef4284f5c5',·1,·'gmx::operator|(SimdDouble·a,·SimdDouble·b)'], |
438 | ········['../group__module__simd.xhtml#gad759e852213903c61d6d4b9053e794fc',·1,·'gmx::operator|(Simd4Float·a,·Simd4Float·b)'], | 438 | ········['../group__module__simd.xhtml#gad759e852213903c61d6d4b9053e794fc',·1,·'gmx::operator|(Simd4Float·a,·Simd4Float·b)'], |
Offset 481, 16 lines modified | Offset 481, 16 lines modified | ||
481 | ····['opt2parg_5freal_150',·['opt2parg_real',·['../group__module__commandline.xhtml#gae89406e3a37c9f5ef580a3362fce2cd7',·1,·'opt2parg_real(const·char·*option,·int·nparg,·t_pargs·pa[]): pargs.cpp'], | 481 | ····['opt2parg_5freal_150',·['opt2parg_real',·['../group__module__commandline.xhtml#gae89406e3a37c9f5ef580a3362fce2cd7',·1,·'opt2parg_real(const·char·*option,·int·nparg,·t_pargs·pa[]): pargs.cpp'], |
482 | ········['../group__module__commandline.xhtml#gae89406e3a37c9f5ef580a3362fce2cd7',·1,·'opt2parg_real(const·char·*option,·int·nparg,·t_pargs·pa[]): pargs.cpp'] | 482 | ········['../group__module__commandline.xhtml#gae89406e3a37c9f5ef580a3362fce2cd7',·1,·'opt2parg_real(const·char·*option,·int·nparg,·t_pargs·pa[]): pargs.cpp'] |
483 | ····]], | 483 | ····]], |
484 | ····['opt2parg_5fstr_151',·['opt2parg_str',·['../group__module__commandline.xhtml#ga80e94dc67a2b2b515f6bce576875e7e9',·1,·'opt2parg_str(const·char·*option,·int·nparg,·t_pargs·pa[]): pargs.cpp'], | 484 | ····['opt2parg_5fstr_151',·['opt2parg_str',·['../group__module__commandline.xhtml#ga80e94dc67a2b2b515f6bce576875e7e9',·1,·'opt2parg_str(const·char·*option,·int·nparg,·t_pargs·pa[]): pargs.cpp'], |
485 | ········['../group__module__commandline.xhtml#ga80e94dc67a2b2b515f6bce576875e7e9',·1,·'opt2parg_str(const·char·*option,·int·nparg,·t_pargs·pa[]): pargs.cpp'] | 485 | ········['../group__module__commandline.xhtml#ga80e94dc67a2b2b515f6bce576875e7e9',·1,·'opt2parg_str(const·char·*option,·int·nparg,·t_pargs·pa[]): pargs.cpp'] |
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488 | ····['optimization_2ecpp_153',·['optimization.cpp',·['../optimization_8cpp.xhtml',·1,·'(Global·Namespace)'], | 488 | ····['optimization_2ecpp_153',·['optimization.cpp',·['../tests_2optimization_8cpp.xhtml',·1,·'(Global·Namespace)'], |
489 | ········['../ | 489 | ········['../optimization_8cpp.xhtml',·1,·'(Global·Namespace)'] |
490 | ····]], | 490 | ····]], |
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492 | ····['optimize_5farithmetic_5fexpressions_155',·['optimize_arithmetic_expressions',·['../compiler_8cpp.xhtml#aa22e901f96e3edaa72c2e222ed75bd01',·1,·'compiler.cpp']]], | 492 | ····['optimize_5farithmetic_5fexpressions_155',·['optimize_arithmetic_expressions',·['../compiler_8cpp.xhtml#aa22e901f96e3edaa72c2e222ed75bd01',·1,·'compiler.cpp']]], |
493 | ····['optimize_5fboolean_5fexpressions_156',·['optimize_boolean_expressions',·['../compiler_8cpp.xhtml#aaf983339164e05e4e7319e88683ca6d6',·1,·'compiler.cpp']]], | 493 | ····['optimize_5fboolean_5fexpressions_156',·['optimize_boolean_expressions',·['../compiler_8cpp.xhtml#aaf983339164e05e4e7319e88683ca6d6',·1,·'compiler.cpp']]], |
494 | ····['optimize_5fsurface_5fpoints_157',·['optimize_surface_points',·['../sm__insolidangle_8cpp.xhtml#aadef1b206fd479d83a526a388faa275e',·1,·'sm_insolidangle.cpp']]], | 494 | ····['optimize_5fsurface_5fpoints_157',·['optimize_surface_points',·['../sm__insolidangle_8cpp.xhtml#aadef1b206fd479d83a526a388faa275e',·1,·'sm_insolidangle.cpp']]], |
495 | ····['optimizeddcells_158',·['optimizeDDCells',·['../domdec__setup_8cpp.xhtml#a0116fb195a0ff21854f683c3d8676b5a',·1,·'domdec_setup.cpp']]], | 495 | ····['optimizeddcells_158',·['optimizeDDCells',·['../domdec__setup_8cpp.xhtml#a0116fb195a0ff21854f683c3d8676b5a',·1,·'domdec_setup.cpp']]], |
496 | ····['option_159',·['option',·['../classgmx_1_1OptionInfo.xhtml#adc99ae3c6896ed469ae9a4aff7423cd9',·1,·'gmx::OptionInfo::option()·const'], | 496 | ····['option_159',·['option',·['../classgmx_1_1OptionInfo.xhtml#adc99ae3c6896ed469ae9a4aff7423cd9',·1,·'gmx::OptionInfo::option()·const'], |
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501 | ····['option_2ecpp_161',·['option.cpp',·['../option_8cpp.xhtml',·1,·'']]], | 501 | ····['option_2ecpp_161',·['option.cpp',·['../option_8cpp.xhtml',·1,·'']]], |
502 | ····['optionfiletype_162',·['OptionFileType',·['../group__module__options.xhtml#ga322a6d38e527f46b273c08583a31665d',·1,·'gmx']]], | 502 | ····['optionfiletype_162',·['OptionFileType',·['../group__module__options.xhtml#ga322a6d38e527f46b273c08583a31665d',·1,·'gmx']]], |
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504 | ····['optionflag_164',·['OptionFlag',·['../namespacegmx.xhtml#ad86fc7354045be1e1456c019b8f97c25',·1,·'gmx']]], | 504 | ····['optionflag_164',·['OptionFlag',·['../namespacegmx.xhtml#ad86fc7354045be1e1456c019b8f97c25',·1,·'gmx']]], |
505 | ····['optionflags_165',·['OptionFlags',·['../namespacegmx.xhtml#a0b60cc84dcdf372e00a5084712630993',·1,·'gmx']]], | 505 | ····['optionflags_165',·['OptionFlags',·['../namespacegmx.xhtml#a0b60cc84dcdf372e00a5084712630993',·1,·'gmx']]], |
506 | ····['optionflags_2eh_166',·['optionflags.h',·['../optionflags_8h.xhtml',·1,·'']]], | 506 | ····['optionflags_2eh_166',·['optionflags.h',·['../optionflags_8h.xhtml',·1,·'']]], |
507 | ····['optioninfo_167',·['optioninfo',·['../classgmx_1_1 | 507 | ····['optioninfo_167',·['optioninfo',·['../classgmx_1_1OptionInfo.xhtml',·1,·'gmx::OptionInfo'], |
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509 | ········['../classgmx_1_1AbstractOptionStorage.xhtml#a14a9360077f79b7c0f768260fa807796',·1,·'gmx::AbstractOptionStorage::optionInfo()'], | ||
508 | ········['../classgmx_1_1 | 510 | ········['../classgmx_1_1BooleanOptionStorage.xhtml#a6dcd9cecae230e1d8f9551d329fb6fbc',·1,·'gmx::BooleanOptionStorage::optionInfo()'], |
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512 | ········['../classgmx_1_1Int64OptionStorage.xhtml#a3b575c5b59217bd0f94ff8a44aa1c9b5',·1,·'gmx::Int64OptionStorage::optionInfo()'], | ||
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509 | ········['../classgmx_1_1FloatOptionStorage.xhtml#a22c2a72cd49b6566794868f635f363fb',·1,·'gmx::FloatOptionStorage::optionInfo()'], | 514 | ········['../classgmx_1_1FloatOptionStorage.xhtml#a22c2a72cd49b6566794868f635f363fb',·1,·'gmx::FloatOptionStorage::optionInfo()'], |
515 | ········['../classgmx_1_1StringOptionStorage.xhtml#adfec3df516810853d338d2a19f3082cb',·1,·'gmx::StringOptionStorage::optionInfo()'], | ||
516 | ········['../classgmx_1_1EnumOptionStorage.xhtml#adbdf1a9b814e0e4ce1d33726c51c3527',·1,·'gmx::EnumOptionStorage::optionInfo()'], | ||
510 | ········['../classgmx_1_1FileNameOptionStorage.xhtml#ac565fab34f14163b1e8591c73b13179b',·1,·'gmx::FileNameOptionStorage::optionInfo()'], | 517 | ········['../classgmx_1_1FileNameOptionStorage.xhtml#ac565fab34f14163b1e8591c73b13179b',·1,·'gmx::FileNameOptionStorage::optionInfo()'], |
511 | ········['../classanonymous__namespace_02abstractoptionstorage_8cpp_03_1_1MockOptionStorage.xhtml#a5446c9407810dc3c5c99e88031f75e66',·1,·'anonymous_namespace{abstractoptionstorage.cpp}::MockOptionStorage::optionInfo()'], | 518 | ········['../classanonymous__namespace_02abstractoptionstorage_8cpp_03_1_1MockOptionStorage.xhtml#a5446c9407810dc3c5c99e88031f75e66',·1,·'anonymous_namespace{abstractoptionstorage.cpp}::MockOptionStorage::optionInfo()'], |
512 | ········['../classgmx_1_1SelectionFileOptionStorage.xhtml#ae7e23ab9895809f8529112419a0d6868',·1,·'gmx::SelectionFileOptionStorage::optionInfo()'], | 519 | ········['../classgmx_1_1SelectionFileOptionStorage.xhtml#ae7e23ab9895809f8529112419a0d6868',·1,·'gmx::SelectionFileOptionStorage::optionInfo()'], |
513 | ········['../classgmx_1_1SelectionOptionStorage.xhtml#a92005e65992f933cee89ac8e73364c26',·1,·'gmx::SelectionOptionStorage::optionInfo()'] | 520 | ········['../classgmx_1_1SelectionOptionStorage.xhtml#a92005e65992f933cee89ac8e73364c26',·1,·'gmx::SelectionOptionStorage::optionInfo()'] |
514 | ········['../classgmx_1_1DoubleOptionStorage.xhtml#a6a468029afea3a69795399893e9c9e61',·1,·'gmx::DoubleOptionStorage::optionInfo()'], | ||
515 | ········['../classgmx_1_1Int64OptionStorage.xhtml#a3b575c5b59217bd0f94ff8a44aa1c9b5',·1,·'gmx::Int64OptionStorage::optionInfo()'], | ||
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517 | ········['../classgmx_1_1BooleanOptionStorage.xhtml#a6dcd9cecae230e1d8f9551d329fb6fbc',·1,·'gmx::BooleanOptionStorage::optionInfo()'], | ||
518 | ········['../classgmx_1_1AbstractOptionStorage.xhtml#a14a9360077f79b7c0f768260fa807796',·1,·'gmx::AbstractOptionStorage::optionInfo()'], | ||
519 | ········['../classgmx_1_1OptionInfo.xhtml#a28702d9e5916402f81fe48c541a260bc',·1,·'gmx::OptionInfo::OptionInfo()'], | ||
520 | ········['../classgmx_1_1OptionInfo.xhtml',·1,·'gmx::OptionInfo'] | ||
521 | ····]], | 521 | ····]], |
522 | ····['optionlist_168',·['optionlist',·['../classgmx_1_1internal_1_1OptionSectionImpl_1_1Group.xhtml#abd2f04d3b754c9be06639ee28a16e0e7',·1,·'gmx::internal::OptionSectionImpl::Group::OptionList'], | 522 | ····['optionlist_168',·['optionlist',·['../classgmx_1_1internal_1_1OptionSectionImpl_1_1Group.xhtml#abd2f04d3b754c9be06639ee28a16e0e7',·1,·'gmx::internal::OptionSectionImpl::Group::OptionList'], |
523 | ········['../classgmx_1_1SelectionOptionManager_1_1Impl.xhtml#a9bcab8534a29f710047bfcccba220da1',·1,·'gmx::SelectionOptionManager::Impl::OptionList'] | 523 | ········['../classgmx_1_1SelectionOptionManager_1_1Impl.xhtml#a9bcab8534a29f710047bfcccba220da1',·1,·'gmx::SelectionOptionManager::Impl::OptionList'] |
524 | ····]], | 524 | ····]], |
525 | ····['optionmanagercontainer_169',·['OptionManagerContainer',·['../classgmx_1_1OptionManagerContainer.xhtml',·1,·'gmx']]], | 525 | ····['optionmanagercontainer_169',·['OptionManagerContainer',·['../classgmx_1_1OptionManagerContainer.xhtml',·1,·'gmx']]], |
526 | ····['optionmanagercontainer_2eh_170',·['optionmanagercontainer.h',·['../optionmanagercontainer_8h.xhtml',·1,·'']]], | 526 | ····['optionmanagercontainer_2eh_170',·['optionmanagercontainer.h',·['../optionmanagercontainer_8h.xhtml',·1,·'']]], |
527 | ····['optionmap_171',·['OptionMap',·['../classgmx_1_1internal_1_1OptionSectionImpl.xhtml#aa8de9d9b14647ede508a45dfb7ebbd22',·1,·'gmx::internal::OptionSectionImpl']]], | 527 | ····['optionmap_171',·['OptionMap',·['../classgmx_1_1internal_1_1OptionSectionImpl.xhtml#aa8de9d9b14647ede508a45dfb7ebbd22',·1,·'gmx::internal::OptionSectionImpl']]], |
528 | ····['optionmap_5f_172',·['optionMap_',·['../classgmx_1_1internal_1_1OptionSectionImpl.xhtml#aec29c46247eccc69f7ffa3f5c9cebed4',·1,·'gmx::internal::OptionSectionImpl']]], | 528 | ····['optionmap_5f_172',·['optionMap_',·['../classgmx_1_1internal_1_1OptionSectionImpl.xhtml#aec29c46247eccc69f7ffa3f5c9cebed4',·1,·'gmx::internal::OptionSectionImpl']]], |
529 | ····['options_173',·['options',·['../page_trajectoryanalysisframework.xhtml#section_trajectoryanalysisframework_options',·1,·'Input·options'], | 529 | ····['options_173',·['options',·['../page_trajectoryanalysisframework.xhtml#section_trajectoryanalysisframework_options',·1,·'Input·options'], |
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47 | ····['pagealignedallocator_27',·['PageAlignedAllocator',·['../namespacegmx.xhtml#af01c69345463ebb433d1fedfd356b74a',·1,·'gmx']]], | 47 | ····['pagealignedallocator_27',·['PageAlignedAllocator',·['../namespacegmx.xhtml#af01c69345463ebb433d1fedfd356b74a',·1,·'gmx']]], |
48 | ····['pagesize_28',·['pageSize',·['../namespacegmx.xhtml#a41f63c30185ee31c10a30e46b7d53f9d',·1,·'gmx']]], | 48 | ····['pagesize_28',·['pageSize',·['../namespacegmx.xhtml#a41f63c30185ee31c10a30e46b7d53f9d',·1,·'gmx']]], |
49 | ····['pair_29',·['pair',·['../structnbnxn__excl__t.xhtml#afc916c53f9b67e8172dc309ddd33a550',·1,·'nbnxn_excl_t::pair'], | 49 | ····['pair_29',·['pair',·['../structnbnxn__excl__t.xhtml#afc916c53f9b67e8172dc309ddd33a550',·1,·'nbnxn_excl_t::pair'], |
50 | ········['../namespacegmx.xhtml#ad4174b02d2bfb10e8538d4844ecc6f81ad0bd662806a73209a1c6fbe55591fbff',·1,·'gmx::Pair'] | 50 | ········['../namespacegmx.xhtml#ad4174b02d2bfb10e8538d4844ecc6f81ad0bd662806a73209a1c6fbe55591fbff',·1,·'gmx::Pair'] |
51 | ····]], | 51 | ····]], |
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53 | ····['paircountwithincutoff_31',·['pairCountWithinCutoff',·['../namespacegmx.xhtml#a246c6fa4555b021df975ad1b7f7697c2',·1,·'gmx']]], | 53 | ····['paircountwithincutoff_31',·['pairCountWithinCutoff',·['../namespacegmx.xhtml#a246c6fa4555b021df975ad1b7f7697c2',·1,·'gmx']]], |
54 | ····['pairdist_2ecpp_32',·['pairdist.cpp',·['../ | 54 | ····['pairdist_2ecpp_32',·['pairdist.cpp',·['../tests_2pairdist_8cpp.xhtml',·1,·'(Global·Namespace)'], |
55 | ········['../ | 55 | ········['../modules_2pairdist_8cpp.xhtml',·1,·'(Global·Namespace)'] |
56 | ····]], | 56 | ····]], |
57 | ····['pairdist_2eh_33',·['pairdist.h',·['../pairdist_8h.xhtml',·1,·'']]], | 57 | ····['pairdist_2eh_33',·['pairdist.h',·['../pairdist_8h.xhtml',·1,·'']]], |
58 | ····['pairdistance_34',·['PairDistance',·['../classgmx_1_1analysismodules_1_1anonymous__namespace_02pairdist_8cpp_03_1_1PairDistance.xhtml',·1,·'gmx::analysismodules::anonymous_namespace{pairdist.cpp}']]], | 58 | ····['pairdistance_34',·['PairDistance',·['../classgmx_1_1analysismodules_1_1anonymous__namespace_02pairdist_8cpp_03_1_1PairDistance.xhtml',·1,·'gmx::analysismodules::anonymous_namespace{pairdist.cpp}']]], |
59 | ····['pairdistancemoduledata_35',·['pairdistancemoduledata',·['../classgmx_1_1analysismodules_1_1anonymous__namespace_02pairdist_8cpp_03_1_1PairDistanceModuleData.xhtml#aee31955e41d398a1738d90c17b9448d7',·1,·'gmx::analysismodules::anonymous_namespace{pairdist.cpp}::PairDistanceModuleData::PairDistanceModuleData()'], | 59 | ····['pairdistancemoduledata_35',·['pairdistancemoduledata',·['../classgmx_1_1analysismodules_1_1anonymous__namespace_02pairdist_8cpp_03_1_1PairDistanceModuleData.xhtml#aee31955e41d398a1738d90c17b9448d7',·1,·'gmx::analysismodules::anonymous_namespace{pairdist.cpp}::PairDistanceModuleData::PairDistanceModuleData()'], |
60 | ········['../classgmx_1_1analysismodules_1_1anonymous__namespace_02pairdist_8cpp_03_1_1PairDistanceModuleData.xhtml',·1,·'gmx::analysismodules::anonymous_namespace{pairdist.cpp}::PairDistanceModuleData'] | 60 | ········['../classgmx_1_1analysismodules_1_1anonymous__namespace_02pairdist_8cpp_03_1_1PairDistanceModuleData.xhtml',·1,·'gmx::analysismodules::anonymous_namespace{pairdist.cpp}::PairDistanceModuleData'] |
61 | ····]], | 61 | ····]], |
62 | ····['pairdistancemoduletest_36',·['PairDistanceModuleTest',·['../namespaceanonymous__namespace_02pairdist_8cpp_03.xhtml#a84bed762b296d3484c2acf0c86895c00',·1,·'anonymous_namespace{pairdist.cpp}']]], | 62 | ····['pairdistancemoduletest_36',·['PairDistanceModuleTest',·['../namespaceanonymous__namespace_02pairdist_8cpp_03.xhtml#a84bed762b296d3484c2acf0c86895c00',·1,·'anonymous_namespace{pairdist.cpp}']]], |
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167 | ········['../classgmx_1_1Bias.xhtml#a951312320562accc324fb9800a88cf66',·1,·'gmx::Bias::params()'], | 167 | ········['../classgmx_1_1Bias.xhtml#a951312320562accc324fb9800a88cf66',·1,·'gmx::Bias::params()'], |
168 | ········['../structnbnxn__atomdata__t.xhtml#ac3864a809c4acc376ece4da861023ba8',·1,·'nbnxn_atomdata_t::params()'], | 168 | ········['../structnbnxn__atomdata__t.xhtml#ac3864a809c4acc376ece4da861023ba8',·1,·'nbnxn_atomdata_t::params()'], |
169 | ········['../classPairlistSets.xhtml#a2aa01e35c546f7101d39342b71bbbaf7',·1,·'PairlistSets::params()'], | 169 | ········['../classPairlistSets.xhtml#a2aa01e35c546f7101d39342b71bbbaf7',·1,·'PairlistSets::params()'], |
170 | ········['../structnbnxn__atomdata__t_1_1Params.xhtml#a35594485444d2e2b8bd339534e43fc97',·1,·'nbnxn_atomdata_t::Params::Params()'] | 170 | ········['../structnbnxn__atomdata__t_1_1Params.xhtml#a35594485444d2e2b8bd339534e43fc97',·1,·'nbnxn_atomdata_t::Params::Params()'] |
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173 | ····['params_5f_87',·['params_',·['../structpull__coord__work__t.xhtml#a319cdb59032343d6d540cd21b5024e8e',·1,·'pull_coord_work_t::params_'], | ||
174 | ····· | 173 | ····['params_5f_87',·['params_',·['../structpull__group__work__t.xhtml#ab664c600643cb118701d8964d662d64b',·1,·'pull_group_work_t::params_'], |
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176 | ····['paramsdeprecated_88',·['paramsDeprecated',·['../structnbnxn__atomdata__t.xhtml#a03a3ce4f7c1c6874c05bc585fdd354af',·1,·'nbnxn_atomdata_t']]], | 176 | ····['paramsdeprecated_88',·['paramsDeprecated',·['../structnbnxn__atomdata__t.xhtml#a03a3ce4f7c1c6874c05bc585fdd354af',·1,·'nbnxn_atomdata_t']]], |
177 | ····['parent_5f_89',·['parent_',·['../classgmx_1_1internal_1_1OptionSectionImpl_1_1Group.xhtml#ab647ddc3f864cc30b88a14ffb7c63507',·1,·'gmx::internal::OptionSectionImpl::Group']]], | 177 | ····['parent_5f_89',·['parent_',·['../classgmx_1_1internal_1_1OptionSectionImpl_1_1Group.xhtml#ab647ddc3f864cc30b88a14ffb7c63507',·1,·'gmx::internal::OptionSectionImpl::Group']]], |
178 | ····['pargs_2ecpp_90',·['pargs.cpp',·['../tests_2pargs_8cpp.xhtml',·1,·'']]], | 178 | ····['pargs_2ecpp_90',·['pargs.cpp',·['../tests_2pargs_8cpp.xhtml',·1,·'']]], |
179 | ····['pargs_2eh_91',·['pargs.h',·['../pargs_8h.xhtml',·1,·'']]], | 179 | ····['pargs_2eh_91',·['pargs.h',·['../pargs_8h.xhtml',·1,·'']]], |
180 | ····['pargstooptions_92',·['pargsToOptions',·['../classgmx_1_1anonymous__namespace_02pargs_8cpp_03_1_1OptionsAdapter.xhtml#acdf7b251332b87229e04e42f1cb70d18',·1,·'gmx::anonymous_namespace{pargs.cpp}::OptionsAdapter']]], | 180 | ····['pargstooptions_92',·['pargsToOptions',·['../classgmx_1_1anonymous__namespace_02pargs_8cpp_03_1_1OptionsAdapter.xhtml#acdf7b251332b87229e04e42f1cb70d18',·1,·'gmx::anonymous_namespace{pargs.cpp}::OptionsAdapter']]], |
181 | ····['parrinellorahmanbarostat_93',·['parrinellorahmanbarostat',·['../classgmx_1_1ParrinelloRahmanBarostat.xhtml',·1,·'gmx::ParrinelloRahmanBarostat'], | 181 | ····['parrinellorahmanbarostat_93',·['parrinellorahmanbarostat',·['../classgmx_1_1ParrinelloRahmanBarostat.xhtml',·1,·'gmx::ParrinelloRahmanBarostat'], |
Offset 243, 16 lines modified | Offset 243, 16 lines modified | ||
243 | ····['pause_145',·['Pause',·['../namespacegmx.xhtml#aa72f45c17038ea5aae00ba6b17cab901a105b296a83f9c105355403f3332af50f',·1,·'gmx']]], | 243 | ····['pause_145',·['Pause',·['../namespacegmx.xhtml#aa72f45c17038ea5aae00ba6b17cab901a105b296a83f9c105355403f3332af50f',·1,·'gmx']]], |
244 | ····['pbc_146',·['pbc',·['../structgmx__sel__evaluate__t.xhtml#ad45dbdc326186b045973ef3ba68bf677',·1,·'gmx_sel_evaluate_t::pbc'], | 244 | ····['pbc_146',·['pbc',·['../structgmx__sel__evaluate__t.xhtml#ad45dbdc326186b045973ef3ba68bf677',·1,·'gmx_sel_evaluate_t::pbc'], |
245 | ········['../classgmx_1_1VirtualSitesHandler.xhtml#a9bc9f8f9c0f9558d09bf4b5ed0273e3ba0fa76fc9cd273da2983f32b5f228e490',·1,·'gmx::VirtualSitesHandler::Pbc'], | 245 | ········['../classgmx_1_1VirtualSitesHandler.xhtml#a9bc9f8f9c0f9558d09bf4b5ed0273e3ba0fa76fc9cd273da2983f32b5f228e490',·1,·'gmx::VirtualSitesHandler::Pbc'], |
246 | ········['../classgmx_1_1TrajectoryFrame.xhtml#a582f593e420137d31acaf230d0b0f4c3',·1,·'gmx::TrajectoryFrame::pbc()'], | 246 | ········['../classgmx_1_1TrajectoryFrame.xhtml#a582f593e420137d31acaf230d0b0f4c3',·1,·'gmx::TrajectoryFrame::pbc()'], |
247 | ········['../structt__swap.xhtml#aa56af1174023261f045e7846a7736772',·1,·'t_swap::pbc'], | 247 | ········['../structt__swap.xhtml#aa56af1174023261f045e7846a7736772',·1,·'t_swap::pbc'], |
248 | ········['../namespacegmx.xhtml#a63cf11bdf7c50436e7a754d50689f362a0fa76fc9cd273da2983f32b5f228e490',·1,·'gmx::Pbc'] | 248 | ········['../namespacegmx.xhtml#a63cf11bdf7c50436e7a754d50689f362a0fa76fc9cd273da2983f32b5f228e490',·1,·'gmx::Pbc'] |
249 | ····]], | 249 | ····]], |
250 | ····['pbc_2ecpp_147',·['pbc.cpp',·['../ | 250 | ····['pbc_2ecpp_147',·['pbc.cpp',·['../pbc_8cpp.xhtml',·1,·'(Global·Namespace)'], |
251 | ········['../pbc_8cpp.xhtml',·1,·'(Global·Namespace)'] | 251 | ········['../tests_2pbc_8cpp.xhtml',·1,·'(Global·Namespace)'] |
252 | ····]], | 252 | ····]], |
253 | ····['pbc_5f_148',·['pbc_',·['../structgmx_1_1SelMethodEvalContext.xhtml#ab12ab95ec24bd1ca9d76d39ed729005b',·1,·'gmx::SelMethodEvalContext']]], | 253 | ····['pbc_5f_148',·['pbc_',·['../structgmx_1_1SelMethodEvalContext.xhtml#ab12ab95ec24bd1ca9d76d39ed729005b',·1,·'gmx::SelMethodEvalContext']]], |
254 | ····['pbc_5faiuc_2eh_149',·['pbc_aiuc.h',·['../pbc__aiuc_8h.xhtml',·1,·'']]], | 254 | ····['pbc_5faiuc_2eh_149',·['pbc_aiuc.h',·['../pbc__aiuc_8h.xhtml',·1,·'']]], |
255 | ····['pbc_5faiuc_5fsycl_2eh_150',·['pbc_aiuc_sycl.h',·['../pbc__aiuc__sycl_8h.xhtml',·1,·'']]], | 255 | ····['pbc_5faiuc_5fsycl_2eh_150',·['pbc_aiuc_sycl.h',·['../pbc__aiuc__sycl_8h.xhtml',·1,·'']]], |
256 | ····['pbc_5fdx_151',·['pbc_dx',·['../pbc_8cpp.xhtml#a9d6a489816eadddbdbd19509b0ff5e46',·1,·'pbc.cpp']]], | 256 | ····['pbc_5fdx_151',·['pbc_dx',·['../pbc_8cpp.xhtml#a9d6a489816eadddbdbd19509b0ff5e46',·1,·'pbc.cpp']]], |
257 | ····['pbc_5fdx_5faiuc_152',·['pbc_dx_aiuc',·['../pbc_8cpp.xhtml#a4493bda77a264b3e5e060e5be15e40ac',·1,·'pbc.cpp']]], | 257 | ····['pbc_5fdx_5faiuc_152',·['pbc_dx_aiuc',·['../pbc_8cpp.xhtml#a4493bda77a264b3e5e060e5be15e40ac',·1,·'pbc.cpp']]], |
258 | ····['pbc_5fdx_5fd_153',·['pbc_dx_d',·['../pbc_8cpp.xhtml#ab8b82070cfe00adb5de6c225e7b2266a',·1,·'pbc.cpp']]], | 258 | ····['pbc_5fdx_5fd_153',·['pbc_dx_d',·['../pbc_8cpp.xhtml#ab8b82070cfe00adb5de6c225e7b2266a',·1,·'pbc.cpp']]], |
Offset 299, 16 lines modified | Offset 299, 16 lines modified | ||
299 | ····['pca_5ftime_5funit_179',·['PCA_TIME_UNIT',·['../group__module__commandline.xhtml#gaee728fbd6eefa75a2ba5321436783f09',·1,·'pargs.h']]], | 299 | ····['pca_5ftime_5funit_179',·['PCA_TIME_UNIT',·['../group__module__commandline.xhtml#gaee728fbd6eefa75a2ba5321436783f09',·1,·'pargs.h']]], |
300 | ····['pcc_180',·['pcc',·['../structgmx__ana__selcollection__t.xhtml#a7ca411d466e27dbd50ab5c115c3f3598',·1,·'gmx_ana_selcollection_t::pcc'], | 300 | ····['pcc_180',·['pcc',·['../structgmx__ana__selcollection__t.xhtml#a7ca411d466e27dbd50ab5c115c3f3598',·1,·'gmx_ana_selcollection_t::pcc'], |
301 | ········['../structt__methoddata__pos.xhtml#a6c3f5f28ba101c4f4c0beb6b36108fc8',·1,·'t_methoddata_pos::pcc'] | 301 | ········['../structt__methoddata__pos.xhtml#a6c3f5f28ba101c4f4c0beb6b36108fc8',·1,·'t_methoddata_pos::pcc'] |
302 | ····]], | 302 | ····]], |
303 | ····['pcomp_181',·['pcomp',·['../namespacegmx.xhtml#a4348fa412ed90d2fc34e3a662700fc14',·1,·'gmx']]], | 303 | ····['pcomp_181',·['pcomp',·['../namespacegmx.xhtml#a4348fa412ed90d2fc34e3a662700fc14',·1,·'gmx']]], |
304 | ····['pcrd_182',·['pcrd',·['../structt__UmbrellaHeader.xhtml#af3928e9091907c4b80faf2c14e0f6691',·1,·'t_UmbrellaHeader']]], | 304 | ····['pcrd_182',·['pcrd',·['../structt__UmbrellaHeader.xhtml#af3928e9091907c4b80faf2c14e0f6691',·1,·'t_UmbrellaHeader']]], |
305 | ····['pdb2gmx_2ecpp_183',·['pdb2gmx.cpp',·['../tests_2pdb2gmx_8cpp.xhtml',·1,·'']]], | 305 | ····['pdb2gmx_2ecpp_183',·['pdb2gmx.cpp',·['../tests_2pdb2gmx_8cpp.xhtml',·1,·'']]], |
306 | ····['pdbatomentry_184',·['pdbatomentry',·['../classPdbAtomEntry.xhtml',·1,·'PdbAtomEntry'], | 306 | ····['pdbatomentry_184',·['pdbatomentry',·['../classPdbAtomEntry.xhtml#a9e2db6cde6cf306ae454740166a14f0a',·1,·'PdbAtomEntry::PdbAtomEntry()'], |
307 | ········['../classPdbAtomEntry.xhtml | 307 | ········['../classPdbAtomEntry.xhtml',·1,·'PdbAtomEntry'], |
308 | ········['../classPdbAtomEntry.xhtml#a85fd7b8e5fc4a9f92e47456562f727ca',·1,·'PdbAtomEntry::PdbAtomEntry(PdbRecordType·type,·int·pdbAtomNumber,·char·alternativeLocation,·const·std::string·&atomName,·std::optional<·real·>·occupancy,·std::optional<·real·>·bFactor)'], | 308 | ········['../classPdbAtomEntry.xhtml#a85fd7b8e5fc4a9f92e47456562f727ca',·1,·'PdbAtomEntry::PdbAtomEntry(PdbRecordType·type,·int·pdbAtomNumber,·char·alternativeLocation,·const·std::string·&atomName,·std::optional<·real·>·occupancy,·std::optional<·real·>·bFactor)'], |
309 | ········['../classPdbAtomEntry.xhtml#aa55e1d8e53d49f0cb617b95d0daead1d',·1,·'PdbAtomEntry::PdbAtomEntry(PdbRecordType·type,·int·atomSerialNumber,·char·alternativeLocation,·const·std::string·&atomName,·std::optional<·real·>·occupancy,·std::optional<·real·>·bFactor,·std::optional<·std::array<·real,·6·>·>·anisotropy)'] | 309 | ········['../classPdbAtomEntry.xhtml#aa55e1d8e53d49f0cb617b95d0daead1d',·1,·'PdbAtomEntry::PdbAtomEntry(PdbRecordType·type,·int·atomSerialNumber,·char·alternativeLocation,·const·std::string·&atomName,·std::optional<·real·>·occupancy,·std::optional<·real·>·bFactor,·std::optional<·std::array<·real,·6·>·>·anisotropy)'] |
310 | ····]], | 310 | ····]], |
311 | ····['pdbatomsselection_185',·['PdbAtomsSelection',·['../namespacegmx_1_1analysismodules_1_1anonymous__namespace_02select_8cpp_03.xhtml#ad52b61bac3000f27e05792835bd38202',·1,·'gmx::analysismodules::anonymous_namespace{select.cpp}']]], | 311 | ····['pdbatomsselection_185',·['PdbAtomsSelection',·['../namespacegmx_1_1analysismodules_1_1anonymous__namespace_02select_8cpp_03.xhtml#ad52b61bac3000f27e05792835bd38202',·1,·'gmx::analysismodules::anonymous_namespace{select.cpp}']]], |
312 | ····['peerrankid_186',·['peerRankId',·['../structgmx__pme__pp.xhtml#afde76cd2a9bb4a6adbdea033648276de',·1,·'gmx_pme_pp']]], | 312 | ····['peerrankid_186',·['peerRankId',·['../structgmx__pme__pp.xhtml#afde76cd2a9bb4a6adbdea033648276de',·1,·'gmx_pme_pp']]], |
313 | ····['pendinglimit_5f_187',·['pendingLimit_',·['../classgmx_1_1internal_1_1AnalysisDataStorageImpl.xhtml#ae5a3ef651453e7c82201e5ec01a29833',·1,·'gmx::internal::AnalysisDataStorageImpl']]], | 313 | ····['pendinglimit_5f_187',·['pendingLimit_',·['../classgmx_1_1internal_1_1AnalysisDataStorageImpl.xhtml#ae5a3ef651453e7c82201e5ec01a29833',·1,·'gmx::internal::AnalysisDataStorageImpl']]], |
314 | ····['perform3dfft_188',·['perform3dfft',·['../classgmx_1_1Gpu3dFft_1_1ImplCuFft.xhtml#a56defb889a6f5693721d93572cbad414',·1,·'gmx::Gpu3dFft::ImplCuFft::perform3dFft()'], | 314 | ····['perform3dfft_188',·['perform3dfft',·['../classgmx_1_1Gpu3dFft_1_1ImplCuFft.xhtml#a56defb889a6f5693721d93572cbad414',·1,·'gmx::Gpu3dFft::ImplCuFft::perform3dFft()'], |
Offset 370, 41 lines modified | Offset 370, 41 lines modified | ||
370 | ····['pl_5fh2d_221',·['pl_h2d',·['../structNbnxm_1_1GpuTimers_1_1Interaction.xhtml#a8b97404577e7366f1c1ff9171348dde9',·1,·'Nbnxm::GpuTimers::Interaction']]], | 370 | ····['pl_5fh2d_221',·['pl_h2d',·['../structNbnxm_1_1GpuTimers_1_1Interaction.xhtml#a8b97404577e7366f1c1ff9171348dde9',·1,·'Nbnxm::GpuTimers::Interaction']]], |
371 | ····['pl_5fh2d_5fc_222',·['pl_h2d_c',·['../structgmx__wallclock__gpu__nbnxn__t.xhtml#accb042927da276091f90e0484dfa40b7',·1,·'gmx_wallclock_gpu_nbnxn_t']]], | 371 | ····['pl_5fh2d_5fc_222',·['pl_h2d_c',·['../structgmx__wallclock__gpu__nbnxn__t.xhtml#accb042927da276091f90e0484dfa40b7',·1,·'gmx_wallclock_gpu_nbnxn_t']]], |
372 | ····['pl_5fh2d_5ft_223',·['pl_h2d_t',·['../structgmx__wallclock__gpu__nbnxn__t.xhtml#a2b87e6ee0f8ea2e0f0e68fe6e2789b47',·1,·'gmx_wallclock_gpu_nbnxn_t']]], | 372 | ····['pl_5fh2d_5ft_223',·['pl_h2d_t',·['../structgmx__wallclock__gpu__nbnxn__t.xhtml#a2b87e6ee0f8ea2e0f0e68fe6e2789b47',·1,·'gmx_wallclock_gpu_nbnxn_t']]], |
373 | ····['place_5fchild_224',·['place_child',·['../params_8cpp.xhtml#a4f03c9212903cb57ab83f37d1c3b8712',·1,·'params.cpp']]], | 373 | ····['place_5fchild_224',·['place_child',·['../params_8cpp.xhtml#a4f03c9212903cb57ab83f37d1c3b8712',·1,·'params.cpp']]], |
374 | ····['placecoordinateswithcominbox_225',·['placeCoordinatesWithCOMInBox',·['../namespacegmx.xhtml#a5ec110d97fdb720c33192280332d9800',·1,·'gmx']]], | 374 | ····['placecoordinateswithcominbox_225',·['placeCoordinatesWithCOMInBox',·['../namespacegmx.xhtml#a5ec110d97fdb720c33192280332d9800',·1,·'gmx']]], |
375 | ····['placeselectionsinrequests_226',·['placeSelectionsInRequests',·['../classgmx_1_1SelectionOptionManager_1_1Impl.xhtml#ab547898cd88fdd6a7a2341f5686b6eca',·1,·'gmx::SelectionOptionManager::Impl']]], | 375 | ····['placeselectionsinrequests_226',·['placeSelectionsInRequests',·['../classgmx_1_1SelectionOptionManager_1_1Impl.xhtml#ab547898cd88fdd6a7a2341f5686b6eca',·1,·'gmx::SelectionOptionManager::Impl']]], |
376 | ····['plainasserthelper_227',·['plainAssertHelper',·['../group__module__testutils.xhtml#gae9b29d32f4bd98d7af90115c230709d4',·1,·'gmx::test']]], | 376 | ····['plainasserthelper_227',·['plainAssertHelper',·['../group__module__testutils.xhtml#gae9b29d32f4bd98d7af90115c230709d4',·1,·'gmx::test']]], |
377 | ····['plan_228',·['plan',·['../structgmx__fft__fftw3.xhtml#a0927083cfc3001dcb5e9cac425fdc916',·1,·'gmx_fft_fftw3::plan'], | ||
377 | ···· | 378 | ········['../structgmx_1_1anonymous__namespace_02gpu__3dfft__sycl__rocfft_8cpp_03_1_1RocfftPlan.xhtml#ab3504132fccac00edfd2031639561afe',·1,·'gmx::anonymous_namespace{gpu_3dfft_sycl_rocfft.cpp}::RocfftPlan::plan'] |
378 | ········['../structgmx__fft__fftw3.xhtml#a0927083cfc3001dcb5e9cac425fdc916',·1,·'gmx_fft_fftw3::plan'] | ||
379 | ····]], | 379 | ····]], |
380 | ····['plans_229',·['Acceptance·tests·and·further·plans',·['../page_modularsimulator.xhtml#autotoc_md19',·1,·'']]], | 380 | ····['plans_229',·['Acceptance·tests·and·further·plans',·['../page_modularsimulator.xhtml#autotoc_md19',·1,·'']]], |
381 | ····['plans_5f_230',·['plans_',·['../classgmx_1_1Gpu3dFft_1_1ImplSyclRocfft_1_1Impl.xhtml#a5c1cd8368ab0e89fd7364b1c891e6304',·1,·'gmx::Gpu3dFft::ImplSyclRocfft::Impl']]], | 381 | ····['plans_5f_230',·['plans_',·['../classgmx_1_1Gpu3dFft_1_1ImplSyclRocfft_1_1Impl.xhtml#a5c1cd8368ab0e89fd7364b1c891e6304',·1,·'gmx::Gpu3dFft::ImplSyclRocfft::Impl']]], |
382 | ····['plansetupdata_231',·['PlanSetupData',·['../structgmx_1_1anonymous__namespace_02gpu__3dfft__sycl__rocfft_8cpp_03_1_1PlanSetupData.xhtml',·1,·'gmx::anonymous_namespace{gpu_3dfft_sycl_rocfft.cpp}']]], | 382 | ····['plansetupdata_231',·['PlanSetupData',·['../structgmx_1_1anonymous__namespace_02gpu__3dfft__sycl__rocfft_8cpp_03_1_1PlanSetupData.xhtml',·1,·'gmx::anonymous_namespace{gpu_3dfft_sycl_rocfft.cpp}']]], |
383 | ····['please_5fcite_232',·['please_cite',·['../pleasecite_8h.xhtml#a2152200367ce7a5c0e63f2cd3bb79ee0',·1,·'pleasecite.cpp']]], | 383 | ····['please_5fcite_232',·['please_cite',·['../pleasecite_8h.xhtml#a2152200367ce7a5c0e63f2cd3bb79ee0',·1,·'pleasecite.cpp']]], |
384 | ····['pleasecite_2eh_233',·['pleasecite.h',·['../pleasecite_8h.xhtml',·1,·'']]], | 384 | ····['pleasecite_2eh_233',·['pleasecite.h',·['../pleasecite_8h.xhtml',·1,·'']]], |
385 | ····['pleasecitegromacs_234',·['pleaseCiteGromacs',·['../pleasecite_8h.xhtml#ad7c5659648be0ae3dbd7fe06a5dd9843',·1,·'pleasecite.cpp']]], | 385 | ····['pleasecitegromacs_234',·['pleaseCiteGromacs',·['../pleasecite_8h.xhtml#ad7c5659648be0ae3dbd7fe06a5dd9843',·1,·'pleasecite.cpp']]], |
386 | ····['plist_235',·['plist',·['../structNbnxmGpu.xhtml#a8cce839a44b19f84ab4362d943847926',·1,·'NbnxmGpu']]], | 386 | ····['plist_235',·['plist',·['../structNbnxmGpu.xhtml#a8cce839a44b19f84ab4362d943847926',·1,·'NbnxmGpu']]], |
387 | ····['plot_2ecpp_236',·['plot.cpp',·['../plot_8cpp.xhtml',·1,·'']]], | 387 | ····['plot_2ecpp_236',·['plot.cpp',·['../plot_8cpp.xhtml',·1,·'']]], |
388 | ····['plot_2eh_237',·['plot.h',·['../plot_8h.xhtml',·1,·'']]], | 388 | ····['plot_2eh_237',·['plot.h',·['../plot_8h.xhtml',·1,·'']]], |
389 | ····['plotformat_238',·['plotFormat',·['../classgmx_1_1AnalysisDataPlotSettings.xhtml#afa657ab31926f3d88d0dfe53e71ee27e',·1,·'gmx::AnalysisDataPlotSettings']]], | 389 | ····['plotformat_238',·['plotFormat',·['../classgmx_1_1AnalysisDataPlotSettings.xhtml#afa657ab31926f3d88d0dfe53e71ee27e',·1,·'gmx::AnalysisDataPlotSettings']]], |
390 | ····['plotsettings_239',·['plotsettings',·['../classgmx_1_1TrajectoryAnalysisSettings.xhtml#a336511e561f81cbeed1a7c631308fbaa',·1,·'gmx::TrajectoryAnalysisSettings::plotSettings()'], | ||
391 | ····· | 390 | ····['plotsettings_239',·['plotsettings',·['../classgmx_1_1TrajectoryAnalysisSettings_1_1Impl.xhtml#ad499ce3ea630e21be1645fd314c5977e',·1,·'gmx::TrajectoryAnalysisSettings::Impl::plotSettings'], |
391 | ········['../classgmx_1_1TrajectoryAnalysisSettings.xhtml#a336511e561f81cbeed1a7c631308fbaa',·1,·'gmx::TrajectoryAnalysisSettings::plotSettings()'] | ||
392 | ····]], | 392 | ····]], |
393 | ····['pmalloc_240',·['pmalloc',·['../pmalloc_8cpp.xhtml#ae10570df1df68fca44040ee4a3d1a95a',·1,·'pmalloc(void·**h_ptr,·size_t·nbytes,·const·DeviceContext·*): pmalloc.cpp'], | 393 | ····['pmalloc_240',·['pmalloc',·['../pmalloc_8cpp.xhtml#ae10570df1df68fca44040ee4a3d1a95a',·1,·'pmalloc(void·**h_ptr,·size_t·nbytes,·const·DeviceContext·*): pmalloc.cpp'], |
394 | ········['../pmalloc__sycl_8cpp.xhtml#a3600a3a1589d7849f5b2f5ee1b54a017',·1,·'pmalloc(void·**h_ptr,·size_t·nbytes,·const·DeviceContext·*deviceContext): pmalloc_sycl.cpp'] | 394 | ········['../pmalloc__sycl_8cpp.xhtml#a3600a3a1589d7849f5b2f5ee1b54a017',·1,·'pmalloc(void·**h_ptr,·size_t·nbytes,·const·DeviceContext·*deviceContext): pmalloc_sycl.cpp'] |
395 | ····]], | 395 | ····]], |
396 | ····['pmalloc_2ecpp_241',·['pmalloc.cpp',·['../pmalloc_8cpp.xhtml',·1,·'']]], | 396 | ····['pmalloc_2ecpp_241',·['pmalloc.cpp',·['../pmalloc_8cpp.xhtml',·1,·'']]], |
397 | ····['pmalloc_2eh_242',·['pmalloc.h',·['../pmalloc_8h.xhtml',·1,·'']]], | 397 | ····['pmalloc_2eh_242',·['pmalloc.h',·['../pmalloc_8h.xhtml',·1,·'']]], |
398 | ····['pmalloc_5fsycl_2ecpp_243',·['pmalloc_sycl.cpp',·['../pmalloc__sycl_8cpp.xhtml',·1,·'']]], | 398 | ····['pmalloc_5fsycl_2ecpp_243',·['pmalloc_sycl.cpp',·['../pmalloc__sycl_8cpp.xhtml',·1,·'']]], |
399 | ····['pme_244',·['pme',·['../namespacegmx.xhtml#a90e1f148d98685136b343e0a20d3c2e5a4792b2e853b980eb284e82db5ad5f4d5',·1,·'gmx::Pme'], | 399 | ····['pme_244',·['pme',·['../namespacegmx.xhtml#a90e1f148d98685136b343e0a20d3c2e5a4792b2e853b980eb284e82db5ad5f4d5',·1,·'gmx::Pme'], |
400 | ········['../namespacegmx.xhtml#a6efc2e8f104eb3699bc82c2b8984cedba4792b2e853b980eb284e82db5ad5f4d5',·1,·'gmx::Pme'] | 400 | ········['../namespacegmx.xhtml#a6efc2e8f104eb3699bc82c2b8984cedba4792b2e853b980eb284e82db5ad5f4d5',·1,·'gmx::Pme'] |
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406 | ····['pme_5fcalc_5fpidx_247',·['pme_calc_pidx',·['../pme__redistribute_8cpp.xhtml#a7ecc9aef79380a045871dc5e00190695',·1,·'pme_redistribute.cpp']]], | 406 | ····['pme_5fcalc_5fpidx_247',·['pme_calc_pidx',·['../pme__redistribute_8cpp.xhtml#a7ecc9aef79380a045871dc5e00190695',·1,·'pme_redistribute.cpp']]], |
407 | ····['pme_5fcalc_5fpidx_5fwrapper_248',·['pme_calc_pidx_wrapper',·['../pme__redistribute_8cpp.xhtml#a91aacccf9c8906e7a5d4e26131820302',·1,·'pme_redistribute.cpp']]], | 407 | ····['pme_5fcalc_5fpidx_5fwrapper_248',·['pme_calc_pidx_wrapper',·['../pme__redistribute_8cpp.xhtml#a91aacccf9c8906e7a5d4e26131820302',·1,·'pme_redistribute.cpp']]], |
408 | ····['pme_5fcoordinate_5freceiver_5fgpu_2eh_249',·['pme_coordinate_receiver_gpu.h',·['../pme__coordinate__receiver__gpu_8h.xhtml',·1,·'']]], | 408 | ····['pme_5fcoordinate_5freceiver_5fgpu_2eh_249',·['pme_coordinate_receiver_gpu.h',·['../pme__coordinate__receiver__gpu_8h.xhtml',·1,·'']]], |
409 | ····['pme_5fcoordinate_5freceiver_5fgpu_5fimpl_2ecpp_250',·['pme_coordinate_receiver_gpu_impl.cpp',·['../pme__coordinate__receiver__gpu__impl_8cpp.xhtml',·1,·'']]], | 409 | ····['pme_5fcoordinate_5freceiver_5fgpu_5fimpl_2ecpp_250',·['pme_coordinate_receiver_gpu_impl.cpp',·['../pme__coordinate__receiver__gpu__impl_8cpp.xhtml',·1,·'']]], |
410 | ····['pme_5fcoordinate_5freceiver_5fgpu_5fimpl_2eh_251',·['pme_coordinate_receiver_gpu_impl.h',·['../pme__coordinate__receiver__gpu__impl_8h.xhtml',·1,·'']]], | 410 | ····['pme_5fcoordinate_5freceiver_5fgpu_5fimpl_2eh_251',·['pme_coordinate_receiver_gpu_impl.h',·['../pme__coordinate__receiver__gpu__impl_8h.xhtml',·1,·'']]], |
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418 | ····['pme_5fgather_5fsycl_2ecpp_259',·['pme_gather_sycl.cpp',·['../pme__gather__sycl_8cpp.xhtml',·1,·'']]], | 418 | ····['pme_5fgather_5fsycl_2ecpp_259',·['pme_gather_sycl.cpp',·['../pme__gather__sycl_8cpp.xhtml',·1,·'']]], |
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420 | ····['pme_5fget_5fpinning_5fpolicy_261',·['pme_get_pinning_policy',·['../pme_8h.xhtml#ace2ad200713ffbae9c71d92d92a83d6f',·1,·'pme_get_pinning_policy(): pme.cpp'], | 420 | ····['pme_5fget_5fpinning_5fpolicy_261',·['pme_get_pinning_policy',·['../pme_8h.xhtml#ace2ad200713ffbae9c71d92d92a83d6f',·1,·'pme_get_pinning_policy(): pme.cpp'], |
421 | ········['../pme_8cpp.xhtml#ace2ad200713ffbae9c71d92d92a83d6f',·1,·'pme_get_pinning_policy(): pme.cpp'] | 421 | ········['../pme_8cpp.xhtml#ace2ad200713ffbae9c71d92d92a83d6f',·1,·'pme_get_pinning_policy(): pme.cpp'] |
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424 | ····['pme_5fgpu_5f3dfft_263',·['pme_gpu_3dfft',·['../pme__gpu__internal_8h.xhtml#a63b83c7907c118ec820a554d4d1e9968',·1,·'pme_gpu_3dfft(const·PmeGpu·*pmeGpu,·enum·gmx_fft_direction·direction,·int·gridIndex=0): pme_gpu_internal.cpp'], | ||
424 | ···· | 425 | ········['../pme__gpu__internal_8cpp.xhtml#a903364732f9d5fe033039714e4aef8dc',·1,·'pme_gpu_3dfft(const·PmeGpu·*pmeGpu,·gmx_fft_direction·dir,·const·int·grid_index): pme_gpu_internal.cpp'] |
425 | ········['../pme__gpu__internal_8h.xhtml#a63b83c7907c118ec820a554d4d1e9968',·1,·'pme_gpu_3dfft(const·PmeGpu·*pmeGpu,·enum·gmx_fft_direction·direction,·int·gridIndex=0): pme_gpu_internal.cpp'] | ||
426 | ····]], | 426 | ····]], |
427 | ····['pme_5fgpu_5factive_264',·['pme_gpu_active',·['../pme__gpu_8cpp.xhtml#a06b866a69f90c5f4b92716d25944e480',·1,·'pme_gpu.cpp']]], | 427 | ····['pme_5fgpu_5factive_264',·['pme_gpu_active',·['../pme__gpu_8cpp.xhtml#a06b866a69f90c5f4b92716d25944e480',·1,·'pme_gpu.cpp']]], |
428 | ····['pme_5fgpu_5falloc_5fenergy_5fvirial_265',·['pme_gpu_alloc_energy_virial',·['../pme__gpu__internal_8h.xhtml#a6857d534c4c31a5f768838378c691464',·1,·'pme_gpu_alloc_energy_virial(PmeGpu·*pmeGpu): pme_gpu_internal.cpp'], | 428 | ····['pme_5fgpu_5falloc_5fenergy_5fvirial_265',·['pme_gpu_alloc_energy_virial',·['../pme__gpu__internal_8h.xhtml#a6857d534c4c31a5f768838378c691464',·1,·'pme_gpu_alloc_energy_virial(PmeGpu·*pmeGpu): pme_gpu_internal.cpp'], |
429 | ········['../pme__gpu__internal_8cpp.xhtml#a6857d534c4c31a5f768838378c691464',·1,·'pme_gpu_alloc_energy_virial(PmeGpu·*pmeGpu): pme_gpu_internal.cpp'] | 429 | ········['../pme__gpu__internal_8cpp.xhtml#a6857d534c4c31a5f768838378c691464',·1,·'pme_gpu_alloc_energy_virial(PmeGpu·*pmeGpu): pme_gpu_internal.cpp'] |
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14 | ····['qminput_5f_8',·['qmInput_',·['../structgmx_1_1QMMMParameters.xhtml#a7674a3c259e4898d8aa6318e84bc6e30',·1,·'gmx::QMMMParameters']]], | 14 | ····['qminput_5f_8',·['qmInput_',·['../structgmx_1_1QMMMParameters.xhtml#a7674a3c259e4898d8aa6318e84bc6e30',·1,·'gmx::QMMMParameters']]], |
15 | ····['qminputfilename_9',·['QMInputFileName',·['../structgmx_1_1QMInputFileName.xhtml',·1,·'gmx']]], | 15 | ····['qminputfilename_9',·['QMInputFileName',·['../structgmx_1_1QMInputFileName.xhtml',·1,·'gmx']]], |
16 | ····['qminputfilename_5f_10',·['qmInputFileName_',·['../structgmx_1_1QMInputFileName.xhtml#a9ac3efe1c20d50610639261468b53431',·1,·'gmx::QMInputFileName']]], | 16 | ····['qminputfilename_5f_10',·['qmInputFileName_',·['../structgmx_1_1QMInputFileName.xhtml#a9ac3efe1c20d50610639261468b53431',·1,·'gmx::QMInputFileName']]], |
17 | ····['qmmethod_5f_11',·['qmMethod_',·['../structgmx_1_1QMMMParameters.xhtml#a7fda0bb8e38552a5c15354eadf9c23ac',·1,·'gmx::QMMMParameters']]], | 17 | ····['qmmethod_5f_11',·['qmMethod_',·['../structgmx_1_1QMMMParameters.xhtml#a7fda0bb8e38552a5c15354eadf9c23ac',·1,·'gmx::QMMMParameters']]], |
18 | ····['qmmm_12',·['qmmm',·['../classgmx_1_1anonymous__namespace_02qmmm_8cpp_03_1_1QMMM.xhtml',·1,·'gmx::anonymous_namespace{qmmm.cpp}::QMMM'], | 18 | ····['qmmm_12',·['qmmm',·['../classgmx_1_1anonymous__namespace_02qmmm_8cpp_03_1_1QMMM.xhtml',·1,·'gmx::anonymous_namespace{qmmm.cpp}::QMMM'], |
19 | ········['../classgmx_1_1anonymous__namespace_02qmmm_8cpp_03_1_1QMMM.xhtml#ac2fa5d36187e29b84a608477b6f2777c',·1,·'gmx::anonymous_namespace{qmmm.cpp}::QMMM::QMMM()'] | 19 | ········['../classgmx_1_1anonymous__namespace_02qmmm_8cpp_03_1_1QMMM.xhtml#ac2fa5d36187e29b84a608477b6f2777c',·1,·'gmx::anonymous_namespace{qmmm.cpp}::QMMM::QMMM()'] |
20 | ····]], | 20 | ····]], |
21 | ····['qmmm_2ecpp_13',·['qmmm.cpp',·['../qmmm_8cpp.xhtml',·1,·'(Global·Namespace)'], | 21 | ····['qmmm_2ecpp_13',·['qmmm.cpp',·['../tests_2qmmm_8cpp.xhtml',·1,·'(Global·Namespace)'], |
22 | ········['../ | 22 | ········['../qmmm_8cpp.xhtml',·1,·'(Global·Namespace)'] |
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24 | ····['qmmm_2eh_14',·['qmmm.h',·['../qmmm_8h.xhtml',·1,·'']]], | 24 | ····['qmmm_2eh_14',·['qmmm.h',·['../qmmm_8h.xhtml',·1,·'']]], |
25 | ····['qmmmforceprovider_15',·['QMMMForceProvider',·['../classgmx_1_1QMMMForceProvider.xhtml',·1,·'gmx']]], | 25 | ····['qmmmforceprovider_15',·['QMMMForceProvider',·['../classgmx_1_1QMMMForceProvider.xhtml',·1,·'gmx']]], |
26 | ····['qmmmforceprovider_2ecpp_16',·['qmmmforceprovider.cpp',·['../ | 26 | ····['qmmmforceprovider_2ecpp_16',·['qmmmforceprovider.cpp',·['../qmmmforceprovider_8cpp.xhtml',·1,·'(Global·Namespace)'], |
27 | ········['../qmmmforceprovider_8cpp.xhtml',·1,·'(Global·Namespace)'] | 27 | ········['../tests_2qmmmforceprovider_8cpp.xhtml',·1,·'(Global·Namespace)'] |
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29 | ····['qmmmforceprovider_2eh_17',·['qmmmforceprovider.h',·['../qmmmforceprovider_8h.xhtml',·1,·'']]], | 29 | ····['qmmmforceprovider_2eh_17',·['qmmmforceprovider.h',·['../qmmmforceprovider_8h.xhtml',·1,·'']]], |
30 | ····['qmmmforceprovider_5fstub_2ecpp_18',·['qmmmforceprovider_stub.cpp',·['../qmmmforceprovider__stub_8cpp.xhtml',·1,·'']]], | 30 | ····['qmmmforceprovider_5fstub_2ecpp_18',·['qmmmforceprovider_stub.cpp',·['../qmmmforceprovider__stub_8cpp.xhtml',·1,·'']]], |
31 | ····['qmmminputgenerator_19',·['qmmminputgenerator',·['../classgmx_1_1QMMMInputGenerator.xhtml#aa0847e6ee608ea7444b36c9db6e0bdd6',·1,·'gmx::QMMMInputGenerator::QMMMInputGenerator()'], | 31 | ····['qmmminputgenerator_19',·['qmmminputgenerator',·['../classgmx_1_1QMMMInputGenerator.xhtml#aa0847e6ee608ea7444b36c9db6e0bdd6',·1,·'gmx::QMMMInputGenerator::QMMMInputGenerator()'], |
32 | ········['../classgmx_1_1QMMMInputGenerator.xhtml',·1,·'gmx::QMMMInputGenerator'] | 32 | ········['../classgmx_1_1QMMMInputGenerator.xhtml',·1,·'gmx::QMMMInputGenerator'] |
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34 | ····['qmmminputgenerator_2ecpp_20',·['qmmminputgenerator.cpp',·['../ | 34 | ····['qmmminputgenerator_2ecpp_20',·['qmmminputgenerator.cpp',·['../qmmminputgenerator_8cpp.xhtml',·1,·'(Global·Namespace)'], |
35 | ········['../qmmminputgenerator_8cpp.xhtml',·1,·'(Global·Namespace)'] | 35 | ········['../tests_2qmmminputgenerator_8cpp.xhtml',·1,·'(Global·Namespace)'] |
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37 | ····['qmmminputgenerator_2eh_21',·['qmmminputgenerator.h',·['../qmmminputgenerator_8h.xhtml',·1,·'']]], | 37 | ····['qmmminputgenerator_2eh_21',·['qmmminputgenerator.h',·['../qmmminputgenerator_8h.xhtml',·1,·'']]], |
38 | ····['qmmmmdptransformfromstring_22',·['QMMMMdpTransformFromString',·['../namespacegmx_1_1anonymous__namespace_02qmmmoptions_8cpp_03.xhtml#a704afcf71de3ae29cf3c3a260c8e8e0c',·1,·'gmx::anonymous_namespace{qmmmoptions.cpp}']]], | 38 | ····['qmmmmdptransformfromstring_22',·['QMMMMdpTransformFromString',·['../namespacegmx_1_1anonymous__namespace_02qmmmoptions_8cpp_03.xhtml#a704afcf71de3ae29cf3c3a260c8e8e0c',·1,·'gmx::anonymous_namespace{qmmmoptions.cpp}']]], |
39 | ····['qmmmmoduleinfo_23',·['QMMMModuleInfo',·['../structgmx_1_1QMMMModuleInfo.xhtml',·1,·'gmx']]], | 39 | ····['qmmmmoduleinfo_23',·['QMMMModuleInfo',·['../structgmx_1_1QMMMModuleInfo.xhtml',·1,·'gmx']]], |
40 | ····['qmmmoptions_24',·['QMMMOptions',·['../classgmx_1_1QMMMOptions.xhtml',·1,·'gmx']]], | 40 | ····['qmmmoptions_24',·['QMMMOptions',·['../classgmx_1_1QMMMOptions.xhtml',·1,·'gmx']]], |
41 | ····['qmmmoptions_2ecpp_25',·['qmmmoptions.cpp',·['../tests_2qmmmoptions_8cpp.xhtml',·1,·'(Global·Namespace)'], | 41 | ····['qmmmoptions_2ecpp_25',·['qmmmoptions.cpp',·['../tests_2qmmmoptions_8cpp.xhtml',·1,·'(Global·Namespace)'], |
42 | ········['../qmmmoptions_8cpp.xhtml',·1,·'(Global·Namespace)'] | 42 | ········['../qmmmoptions_8cpp.xhtml',·1,·'(Global·Namespace)'] |
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48 | ····]], | 48 | ····]], |
49 | ····['qmmmqmmethod_29',·['QMMMQMMethod',·['../namespacegmx.xhtml#ae35b2c8b377f35030a2b9dfb697e2ea3',·1,·'gmx']]], | 49 | ····['qmmmqmmethod_29',·['QMMMQMMethod',·['../namespacegmx.xhtml#ae35b2c8b377f35030a2b9dfb697e2ea3',·1,·'gmx']]], |
50 | ····['qmmmsimulationparametersetup_30',·['QMMMSimulationParameterSetup',·['../classgmx_1_1anonymous__namespace_02qmmm_8cpp_03_1_1QMMMSimulationParameterSetup.xhtml',·1,·'gmx::anonymous_namespace{qmmm.cpp}']]], | 50 | ····['qmmmsimulationparametersetup_30',·['QMMMSimulationParameterSetup',·['../classgmx_1_1anonymous__namespace_02qmmm_8cpp_03_1_1QMMMSimulationParameterSetup.xhtml',·1,·'gmx::anonymous_namespace{qmmm.cpp}']]], |
51 | ····['qmmmtopologyinfo_31',·['QMMMTopologyInfo',·['../structgmx_1_1QMMMTopologyInfo.xhtml',·1,·'gmx']]], | 51 | ····['qmmmtopologyinfo_31',·['QMMMTopologyInfo',·['../structgmx_1_1QMMMTopologyInfo.xhtml',·1,·'gmx']]], |
52 | ····['qmmmtopologypreprocessor_32',·['qmmmtopologypreprocessor',·['../classgmx_1_1QMMMTopologyPreprocessor.xhtml',·1,·'gmx::QMMMTopologyPreprocessor'], | 52 | ····['qmmmtopologypreprocessor_32',·['qmmmtopologypreprocessor',·['../classgmx_1_1QMMMTopologyPreprocessor.xhtml',·1,·'gmx::QMMMTopologyPreprocessor'], |
53 | ········['../classgmx_1_1QMMMTopologyPreprocessor.xhtml#a9cbf3dfe9cc1e591acdb6bf5723d54a8',·1,·'gmx::QMMMTopologyPreprocessor::QMMMTopologyPreprocessor()'] | 53 | ········['../classgmx_1_1QMMMTopologyPreprocessor.xhtml#a9cbf3dfe9cc1e591acdb6bf5723d54a8',·1,·'gmx::QMMMTopologyPreprocessor::QMMMTopologyPreprocessor()'] |
54 | ····]], | 54 | ····]], |
55 | ····['qmmmtopologypreprocessor_2ecpp_33',·['qmmmtopologypreprocessor.cpp',·['../qmmmtopologypreprocessor_8cpp.xhtml',·1,·'(Global·Namespace)'], | 55 | ····['qmmmtopologypreprocessor_2ecpp_33',·['qmmmtopologypreprocessor.cpp',·['../tests_2qmmmtopologypreprocessor_8cpp.xhtml',·1,·'(Global·Namespace)'], |
56 | ········['../ | 56 | ········['../qmmmtopologypreprocessor_8cpp.xhtml',·1,·'(Global·Namespace)'] |
57 | ····]], | 57 | ····]], |
58 | ····['qmmmtopologypreprocessor_2eh_34',·['qmmmtopologypreprocessor.h',·['../qmmmtopologypreprocessor_8h.xhtml',·1,·'']]], | 58 | ····['qmmmtopologypreprocessor_2eh_34',·['qmmmtopologypreprocessor.h',·['../qmmmtopologypreprocessor_8h.xhtml',·1,·'']]], |
59 | ····['qmmmtypes_2eh_35',·['qmmmtypes.h',·['../qmmmtypes_8h.xhtml',·1,·'']]], | 59 | ····['qmmmtypes_2eh_35',·['qmmmtypes.h',·['../qmmmtypes_8h.xhtml',·1,·'']]], |
60 | ····['qmmultiplicity_5f_36',·['qmMultiplicity_',·['../structgmx_1_1QMMMParameters.xhtml#a7a6462874d94f1796438498baf316205',·1,·'gmx::QMMMParameters']]], | 60 | ····['qmmultiplicity_5f_36',·['qmMultiplicity_',·['../structgmx_1_1QMMMParameters.xhtml#a7a6462874d94f1796438498baf316205',·1,·'gmx::QMMMParameters']]], |
61 | ····['qmpdb_5f_37',·['qmPdb_',·['../structgmx_1_1QMMMParameters.xhtml#aa744e90d045c43378c79f232ad5569df',·1,·'gmx::QMMMParameters']]], | 61 | ····['qmpdb_5f_37',·['qmPdb_',·['../structgmx_1_1QMMMParameters.xhtml#aa744e90d045c43378c79f232ad5569df',·1,·'gmx::QMMMParameters']]], |
62 | ····['qmtrans_38',·['qmTrans',·['../classgmx_1_1QMMMInputGenerator.xhtml#afe2a5eef7dcb5e0bb01b2cf091fb54b7',·1,·'gmx::QMMMInputGenerator']]], | 62 | ····['qmtrans_38',·['qmTrans',·['../classgmx_1_1QMMMInputGenerator.xhtml#afe2a5eef7dcb5e0bb01b2cf091fb54b7',·1,·'gmx::QMMMInputGenerator']]], |
63 | ····['qmtrans_5f_39',·['qmTrans_',·['../structgmx_1_1QMMMParameters.xhtml#a8e2f8f012ba8f6d14a7acc0a6e7fa12a',·1,·'gmx::QMMMParameters']]], | 63 | ····['qmtrans_5f_39',·['qmTrans_',·['../structgmx_1_1QMMMParameters.xhtml#a8e2f8f012ba8f6d14a7acc0a6e7fa12a',·1,·'gmx::QMMMParameters']]], |
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2 | ····['r_0',·['r',·['../structt__methoddata__kwreal.xhtml#a706e2e3fed6d01d17526f5048cff8b2c',·1,·'t_methoddata_kwreal::r'], | ||
2 | ····['r_0',·['r',·['../structt__pargs.xhtml#a90a5c0ca62506725a9e95ec84b5efc6e',·1,·'t_pargs::r'], | ||
3 | ········['../classgmx_1_1SelectionParserValue.xhtml#a9ce3f667ffb18ed4f8fc36e008bcae73',·1,·'gmx::SelectionParserValue::r'], | ||
4 | ········['../structgmx__ana__selvalue__t.xhtml#afdab2e1a8e6d0b4157f0d823f063020a',·1,·'gmx_ana_selvalue_t::r'], | ||
5 | ········['../structt__compare__value.xhtml#a1b111721fc44d7a544610d3ba0ce0ee2',·1,·'t_compare_value::r'], | ||
6 | ········['../structt__methoddata__kwint.xhtml#aa39284c271e999c60ab7a551dfa24345',·1,·'t_methoddata_kwint::r'], | 3 | ········['../structt__methoddata__kwint.xhtml#aa39284c271e999c60ab7a551dfa24345',·1,·'t_methoddata_kwint::r'], |
7 | ········['../structt__ | 4 | ········['../structt__compare__value.xhtml#a1b111721fc44d7a544610d3ba0ce0ee2',·1,·'t_compare_value::r'], |
5 | ········['../structgmx__ana__selvalue__t.xhtml#afdab2e1a8e6d0b4157f0d823f063020a',·1,·'gmx_ana_selvalue_t::r'], | ||
6 | ········['../structt__pargs.xhtml#a90a5c0ca62506725a9e95ec84b5efc6e',·1,·'t_pargs::r'], | ||
7 | ········['../classgmx_1_1SelectionParserValue.xhtml#a9ce3f667ffb18ed4f8fc36e008bcae73',·1,·'gmx::SelectionParserValue::r'] | ||
8 | ····]], | 8 | ····]], |
9 | ····['r1_1',·['r1',·['../classgmx_1_1SelectionParserValue.xhtml#a12b45dd041bcabf54199a7328f2b2f5e',·1,·'gmx::SelectionParserValue']]], | 9 | ····['r1_1',·['r1',·['../classgmx_1_1SelectionParserValue.xhtml#a12b45dd041bcabf54199a7328f2b2f5e',·1,·'gmx::SelectionParserValue']]], |
10 | ····['r2_2',·['r2',·['../classgmx_1_1SelectionParserValue.xhtml#abf6992460ae77085e9fe7b5cbffe875f',·1,·'gmx::SelectionParserValue']]], | 10 | ····['r2_2',·['r2',·['../classgmx_1_1SelectionParserValue.xhtml#abf6992460ae77085e9fe7b5cbffe875f',·1,·'gmx::SelectionParserValue']]], |
11 | ····['r2f_5fd_3',·['R2F_D',·['../namespaceNbnxm.xhtml#abb3176f8f7161562314a884cf5b24d51',·1,·'Nbnxm']]], | 11 | ····['r2f_5fd_3',·['R2F_D',·['../namespaceNbnxm.xhtml#abb3176f8f7161562314a884cf5b24d51',·1,·'Nbnxm']]], |
12 | ····['r2f_5fu_4',·['R2F_U',·['../namespaceNbnxm.xhtml#a3aea3cfb77656f9580dec0f18aae70a0',·1,·'Nbnxm']]], | 12 | ····['r2f_5fu_4',·['R2F_U',·['../namespaceNbnxm.xhtml#a3aea3cfb77656f9580dec0f18aae70a0',·1,·'Nbnxm']]], |
13 | ····['r2xmm_5',·['r2xMM',·['../nbnxm__simd_8h.xhtml#af4b5bb6df4ee3851f0ee912728888c84a57db5822182abd070a0cb1e0c044f8d3',·1,·'nbnxm_simd.h']]], | 13 | ····['r2xmm_5',·['r2xMM',·['../nbnxm__simd_8h.xhtml#af4b5bb6df4ee3851f0ee912728888c84a57db5822182abd070a0cb1e0c044f8d3',·1,·'nbnxm_simd.h']]], |
14 | ····['r4xm_6',·['r4xM',·['../nbnxm__simd_8h.xhtml#af4b5bb6df4ee3851f0ee912728888c84a31bf763775b4a352a2b2a71609bf461f',·1,·'nbnxm_simd.h']]], | 14 | ····['r4xm_6',·['r4xM',·['../nbnxm__simd_8h.xhtml#af4b5bb6df4ee3851f0ee912728888c84a31bf763775b4a352a2b2a71609bf461f',·1,·'nbnxm_simd.h']]], |
Offset 19, 18 lines modified | Offset 19, 18 lines modified | ||
19 | ····['radius_11',·['radius',·['../structanonymous__namespace_02edsam_8cpp_03_1_1t__eigvec.xhtml#a1e1a8ed060b36ec79f0b80791ab92cf8',·1,·'anonymous_namespace{edsam.cpp}::t_eigvec']]], | 19 | ····['radius_11',·['radius',·['../structanonymous__namespace_02edsam_8cpp_03_1_1t__eigvec.xhtml#a1e1a8ed060b36ec79f0b80791ab92cf8',·1,·'anonymous_namespace{edsam.cpp}::t_eigvec']]], |
20 | ····['raiseassert_12',·['raiseAssert',·['../namespaceanonymous__namespace_02keyvaluetreeserializer_8cpp_03.xhtml#a0cd2647a22a81387c0f5e52af1ad3e5d',·1,·'anonymous_namespace{keyvaluetreeserializer.cpp}']]], | 20 | ····['raiseassert_12',·['raiseAssert',·['../namespaceanonymous__namespace_02keyvaluetreeserializer_8cpp_03.xhtml#a0cd2647a22a81387c0f5e52af1ad3e5d',·1,·'anonymous_namespace{keyvaluetreeserializer.cpp}']]], |
21 | ····['rand_5fgaussian_13',·['rand_gaussian',·['../classgmx_1_1ColvarProxyGromacs.xhtml#a3c80a4ed10ddf3d0973d30ae36ef5959',·1,·'gmx::ColvarProxyGromacs']]], | 21 | ····['rand_5fgaussian_13',·['rand_gaussian',·['../classgmx_1_1ColvarProxyGromacs.xhtml#a3c80a4ed10ddf3d0973d30ae36ef5959',·1,·'gmx::ColvarProxyGromacs']]], |
22 | ····['random_20engines_20and_20distributions_20random_14',·['Random·engines·and·distributions·(random)',·['../group__module__random.xhtml',·1,·'']]], | 22 | ····['random_20engines_20and_20distributions_20random_14',·['Random·engines·and·distributions·(random)',·['../group__module__random.xhtml',·1,·'']]], |
23 | ····['randomdevice_15',·['RandomDevice',·['../namespacegmx.xhtml#aac44e2bbcc40f48812b6b756a503ea51',·1,·'gmx']]], | 23 | ····['randomdevice_15',·['RandomDevice',·['../namespacegmx.xhtml#aac44e2bbcc40f48812b6b756a503ea51',·1,·'gmx']]], |
24 | ····['randomdomain_16',·['RandomDomain',·['../namespacegmx.xhtml#a73202d646d57bcc963d8afd5a16015f0',·1,·'gmx']]], | 24 | ····['randomdomain_16',·['RandomDomain',·['../namespacegmx.xhtml#a73202d646d57bcc963d8afd5a16015f0',·1,·'gmx']]], |
25 | ····['randomseed_17',·['randomSeed',·['../structReplicaExchangeParameters.xhtml#a56dd51bce5fdf8d0f6dc7263995f3852',·1,·'ReplicaExchangeParameters']]], | 25 | ····['randomseed_17',·['randomSeed',·['../structReplicaExchangeParameters.xhtml#a56dd51bce5fdf8d0f6dc7263995f3852',·1,·'ReplicaExchangeParameters']]], |
26 | ····['range_18',·['range',·['../classgmx_1_1Range.xhtml#afb1032527bec55cb71b19d953d9bd952',·1,·'gmx::Range::Range()'], | ||
27 | ····· | 26 | ····['range_18',·['range',·['../classgmx_1_1Range.xhtml',·1,·'gmx::Range<·T·>'], |
27 | ········['../classgmx_1_1Range.xhtml#afb1032527bec55cb71b19d953d9bd952',·1,·'gmx::Range::Range(const·T·begin,·const·T·end)'], | ||
28 | ········['../classgmx_1_1Range.xhtml#ae9b28db691f32f023a7698d86af23bfe',·1,·'gmx::Range::Range()=default'], | ||
28 | ········['../classgmx_1_1AnalysisHistogramSettingsInitializer.xhtml#ab245cc452d9a92f828058b322260c738',·1,·'gmx::AnalysisHistogramSettingsInitializer::range()'] | 29 | ········['../classgmx_1_1AnalysisHistogramSettingsInitializer.xhtml#ab245cc452d9a92f828058b322260c738',·1,·'gmx::AnalysisHistogramSettingsInitializer::range()'] |
29 | ········['../classgmx_1_1Range.xhtml#ae9b28db691f32f023a7698d86af23bfe',·1,·'gmx::Range::Range()'] | ||
30 | ····]], | 30 | ····]], |
31 | ····['range_20non_20bonded_20interaction_20module_19',·['Short-range·non-bonded·interaction·module',·['../group______module__nbnxm.xhtml',·1,·'']]], | 31 | ····['range_20non_20bonded_20interaction_20module_19',·['Short-range·non-bonded·interaction·module',·['../group______module__nbnxm.xhtml',·1,·'']]], |
32 | ····['range_2ecpp_20',·['range.cpp',·['../range_8cpp.xhtml',·1,·'']]], | 32 | ····['range_2ecpp_20',·['range.cpp',·['../range_8cpp.xhtml',·1,·'']]], |
33 | ····['range_2eh_21',·['range.h',·['../range_8h.xhtml',·1,·'']]], | 33 | ····['range_2eh_21',·['range.h',·['../range_8h.xhtml',·1,·'']]], |
34 | ····['range_3c_20int_20_3e_22',·['Range<·int·>',·['../classgmx_1_1Range.xhtml',·1,·'gmx']]], | 34 | ····['range_3c_20int_20_3e_22',·['Range<·int·>',·['../classgmx_1_1Range.xhtml',·1,·'gmx']]], |
35 | ····['range_5fcheck_23',·['range_check',·['../fatalerror_8h.xhtml#aa6ee0d4697fffc7500ba038e45b7a52b',·1,·'fatalerror.h']]], | 35 | ····['range_5fcheck_23',·['range_check',·['../fatalerror_8h.xhtml#aa6ee0d4697fffc7500ba038e45b7a52b',·1,·'fatalerror.h']]], |
36 | ····['range_5fcheck_5ffunction_24',·['range_check_function',·['../fatalerror_8h.xhtml#a955260829b0c4edebc828407521ab926',·1,·'fatalerror.cpp']]], | 36 | ····['range_5fcheck_5ffunction_24',·['range_check_function',·['../fatalerror_8h.xhtml#a955260829b0c4edebc828407521ab926',·1,·'fatalerror.cpp']]], |
Offset 40, 49 lines modified | Offset 40, 49 lines modified | ||
40 | ····['rangeend_28',·['rangeEnd',·['../structgmx_1_1VsiteThread.xhtml#a72938a839a2c0d118f6797e2a43250f4',·1,·'gmx::VsiteThread']]], | 40 | ····['rangeend_28',·['rangeEnd',·['../structgmx_1_1VsiteThread.xhtml#a72938a839a2c0d118f6797e2a43250f4',·1,·'gmx::VsiteThread']]], |
41 | ····['rangeendwithinlattice_29',·['rangeEndWithinLattice',·['../namespacegmx_1_1anonymous__namespace_02gausstransform_8cpp_03.xhtml#a243e048e17f19acbe3bb8abd70a46e21',·1,·'gmx::anonymous_namespace{gausstransform.cpp}']]], | 41 | ····['rangeendwithinlattice_29',·['rangeEndWithinLattice',·['../namespacegmx_1_1anonymous__namespace_02gausstransform_8cpp_03.xhtml#a243e048e17f19acbe3bb8abd70a46e21',·1,·'gmx::anonymous_namespace{gausstransform.cpp}']]], |
42 | ····['rangeerror_30',·['rangeerror',·['../classgmx_1_1RangeError.xhtml',·1,·'gmx::RangeError'], | 42 | ····['rangeerror_30',·['rangeerror',·['../classgmx_1_1RangeError.xhtml',·1,·'gmx::RangeError'], |
43 | ········['../classgmx_1_1RangeError.xhtml#a269b00f74ffc0e283c52e93a637fe15b',·1,·'gmx::RangeError::RangeError()'] | 43 | ········['../classgmx_1_1RangeError.xhtml#a269b00f74ffc0e283c52e93a637fe15b',·1,·'gmx::RangeError::RangeError()'] |
44 | ····]], | 44 | ····]], |
45 | ····['rangepartitioning_31',·['RangePartitioning',·['../classgmx_1_1RangePartitioning.xhtml',·1,·'gmx']]], | 45 | ····['rangepartitioning_31',·['RangePartitioning',·['../classgmx_1_1RangePartitioning.xhtml',·1,·'gmx']]], |
46 | ····['rangestart_32',·['rangeStart',·['../structgmx_1_1VsiteThread.xhtml#a54836c843926924a9d7aeef4eb67c3b6',·1,·'gmx::VsiteThread']]], | 46 | ····['rangestart_32',·['rangeStart',·['../structgmx_1_1VsiteThread.xhtml#a54836c843926924a9d7aeef4eb67c3b6',·1,·'gmx::VsiteThread']]], |
47 | ····['rank_33',·['rank',·['../classgmx_1_1extents.xhtml#a820b91d5723b436e2fe4e945b1567cd8',·1,·'gmx::extents::rank()'], | ||
47 | ···· | 48 | ········['../structgmx_1_1detail_1_1extents__analyse_3_01R_00_01E0_00_01StaticExtents_8_8_8_01_4.xhtml#a9119b00490d88491ca8aca3f2756eb68',·1,·'gmx::detail::extents_analyse<·R,·E0,·StaticExtents...·>::rank()'], |
48 | ········['../structgmx_1_1detail_1_1extents__analyse_3_01R_00_01dynamic__extent_00_01StaticExtents_8_8_8_01_4.xhtml#a8539e7c8fed5b899da201ec934e64b09',·1,·'gmx::detail::extents_analyse<·R,·dynamic_extent,·StaticExtents...·>::rank()'], | 49 | ········['../structgmx_1_1detail_1_1extents__analyse_3_01R_00_01dynamic__extent_00_01StaticExtents_8_8_8_01_4.xhtml#a8539e7c8fed5b899da201ec934e64b09',·1,·'gmx::detail::extents_analyse<·R,·dynamic_extent,·StaticExtents...·>::rank()'], |
49 | ········['../structgmx_1_1detail_1_1extents__analyse_3_010_01_4.xhtml#aa2ca0283067694f1eee0d0981d638830',·1,·'gmx::detail::extents_analyse<·0·>::rank()'], | 50 | ········['../structgmx_1_1detail_1_1extents__analyse_3_010_01_4.xhtml#aa2ca0283067694f1eee0d0981d638830',·1,·'gmx::detail::extents_analyse<·0·>::rank()'], |
50 | ········['../classgmx_1_1extents.xhtml#a820b91d5723b436e2fe4e945b1567cd8',·1,·'gmx::extents::rank()'], | ||
51 | ········['../classgmx_1_1basic__mdspan.xhtml#aa123062b4b417e31f6ee6d6d501bf730',·1,·'gmx::basic_mdspan::rank()'] | 51 | ········['../classgmx_1_1basic__mdspan.xhtml#aa123062b4b417e31f6ee6d6d501bf730',·1,·'gmx::basic_mdspan::rank()'] |
52 | ····]], | 52 | ····]], |
53 | ····['rank_5f_34',·['rank_',·['../classgmx_1_1test_1_1MultiSimTest.xhtml#a6ff7c1fd28f79d2144d4fa8c7ea6d66b',·1,·'gmx::test::MultiSimTest::rank_'], | 53 | ····['rank_5f_34',·['rank_',·['../classgmx_1_1test_1_1MultiSimTest.xhtml#a6ff7c1fd28f79d2144d4fa8c7ea6d66b',·1,·'gmx::test::MultiSimTest::rank_'], |
54 | ········['../classgmx_1_1PhysicalNodeCommunicator.xhtml#a79c62a230ce71d927908051861617db7',·1,·'gmx::PhysicalNodeCommunicator::rank_'] | 54 | ········['../classgmx_1_1PhysicalNodeCommunicator.xhtml#a79c62a230ce71d927908051861617db7',·1,·'gmx::PhysicalNodeCommunicator::rank_'] |
55 | ····]], | 55 | ····]], |
56 | ····['rank_5fdynamic_35',·['rank_dynamic',·['../structgmx_1_1detail_1_1extents__analyse_3_010_01_4.xhtml#a409581965d3fd0b846a8e07caf3c99b5',·1,·'gmx::detail::extents_analyse<·0·>::rank_dynamic()'], | ||
57 | ····· | 56 | ····['rank_5fdynamic_35',·['rank_dynamic',·['../structgmx_1_1detail_1_1extents__analyse_3_01R_00_01dynamic__extent_00_01StaticExtents_8_8_8_01_4.xhtml#a01e169e346558c3306eeedd83410be23',·1,·'gmx::detail::extents_analyse<·R,·dynamic_extent,·StaticExtents...·>::rank_dynamic()'], |
58 | ········['../structgmx_1_1detail_1_1extents__analyse_3_01R_00_01E0_00_01StaticExtents_8_8_8_01_4.xhtml#a912b51b44cdb8debd19646667441e7ae',·1,·'gmx::detail::extents_analyse<·R,·E0,·StaticExtents...·>::rank_dynamic()'], | 57 | ········['../structgmx_1_1detail_1_1extents__analyse_3_01R_00_01E0_00_01StaticExtents_8_8_8_01_4.xhtml#a912b51b44cdb8debd19646667441e7ae',·1,·'gmx::detail::extents_analyse<·R,·E0,·StaticExtents...·>::rank_dynamic()'], |
59 | ········['../classgmx_1_1extents.xhtml#a1fea5f754883deea39d015272e3416a9',·1,·'gmx::extents::rank_dynamic()'], | 58 | ········['../classgmx_1_1extents.xhtml#a1fea5f754883deea39d015272e3416a9',·1,·'gmx::extents::rank_dynamic()'], |
60 | ········['../classgmx_1_1basic__mdspan.xhtml#a9a2766f08ad64cc47f14e69ea749ff8a',·1,·'gmx::basic_mdspan::rank_dynamic()'] | 59 | ········['../classgmx_1_1basic__mdspan.xhtml#a9a2766f08ad64cc47f14e69ea749ff8a',·1,·'gmx::basic_mdspan::rank_dynamic()'], |
60 | ········['../structgmx_1_1detail_1_1extents__analyse_3_010_01_4.xhtml#a409581965d3fd0b846a8e07caf3c99b5',·1,·'gmx::detail::extents_analyse<·0·>::rank_dynamic()'] | ||
61 | ····]], | 61 | ····]], |
62 | ····['rankdata_36',·['RankData',·['../structgmx_1_1test_1_1anonymous__namespace_02observablesreducer_8cpp_03_1_1ObservablesReducerIntegrationTest_1_1RankData.xhtml',·1,·'gmx::test::anonymous_namespace{observablesreducer.cpp}::ObservablesReducerIntegrationTest']]], | 62 | ····['rankdata_36',·['RankData',·['../structgmx_1_1test_1_1anonymous__namespace_02observablesreducer_8cpp_03_1_1ObservablesReducerIntegrationTest_1_1RankData.xhtml',·1,·'gmx::test::anonymous_namespace{observablesreducer.cpp}::ObservablesReducerIntegrationTest']]], |
63 | ····['rankdata_5f_37',·['rankData_',·['../classgmx_1_1test_1_1anonymous__namespace_02observablesreducer_8cpp_03_1_1ObservablesReducerIntegrationTest.xhtml#a7312c5aa683c048d3a18a4ffc65b5ee1',·1,·'gmx::test::anonymous_namespace{observablesreducer.cpp}::ObservablesReducerIntegrationTest']]], | 63 | ····['rankdata_5f_37',·['rankData_',·['../classgmx_1_1test_1_1anonymous__namespace_02observablesreducer_8cpp_03_1_1ObservablesReducerIntegrationTest.xhtml#a7312c5aa683c048d3a18a4ffc65b5ee1',·1,·'gmx::test::anonymous_namespace{observablesreducer.cpp}::ObservablesReducerIntegrationTest']]], |
64 | ····['rankid_38',·['rankid',·['../structPpRanks.xhtml#a036a7b9afeb0b7236fac83eef6d9ccde',·1,·'PpRanks::rankId'], | 64 | ····['rankid_38',·['rankid',·['../structPpRanks.xhtml#a036a7b9afeb0b7236fac83eef6d9ccde',·1,·'PpRanks::rankId'], |
65 | ········['../structPpRanksSendFInfo.xhtml#ac5f914e09477e4aea6f3e890be23ebc8',·1,·'PpRanksSendFInfo::rankId'] | 65 | ········['../structPpRanksSendFInfo.xhtml#ac5f914e09477e4aea6f3e890be23ebc8',·1,·'PpRanksSendFInfo::rankId'] |
66 | ····]], | 66 | ····]], |
67 | ····['rankorder_39',·['rankOrder',·['../structgmx_1_1DomdecOptions.xhtml#a1500b9b56069c6e23fa299ec0dc0f2f7',·1,·'gmx::DomdecOptions']]], | 67 | ····['rankorder_39',·['rankOrder',·['../structgmx_1_1DomdecOptions.xhtml#a1500b9b56069c6e23fa299ec0dc0f2f7',·1,·'gmx::DomdecOptions']]], |
68 | ····['ranksx_40',·['ranksX',·['../structPmeGpuHaloExchange.xhtml#a3bf4456e5038af8f8efa97e775149454',·1,·'PmeGpuHaloExchange']]], | 68 | ····['ranksx_40',·['ranksX',·['../structPmeGpuHaloExchange.xhtml#a3bf4456e5038af8f8efa97e775149454',·1,·'PmeGpuHaloExchange']]], |
69 | ····['ranksy_41',·['ranksY',·['../structPmeGpuHaloExchange.xhtml#a19a6e73d53924f34cf236d0b59ae00b7',·1,·'PmeGpuHaloExchange']]], | 69 | ····['ranksy_41',·['ranksY',·['../structPmeGpuHaloExchange.xhtml#a19a6e73d53924f34cf236d0b59ae00b7',·1,·'PmeGpuHaloExchange']]], |
70 | ····['ratio_42',·['Ratio',·['../md__enums_8h.xhtml#a7f23540ff5222f8735be151f3cbd1b2fa8334a158298fbcf163f4dcb4a387d150',·1,·'md_enums.h']]], | 70 | ····['ratio_42',·['Ratio',·['../md__enums_8h.xhtml#a7f23540ff5222f8735be151f3cbd1b2fa8334a158298fbcf163f4dcb4a387d150',·1,·'md_enums.h']]], |
71 | ····['rawarray_43',·['RawArray',·['../classgmx_1_1BasicVector.xhtml#a24812716e2a9270a0152fa29727d73a4',·1,·'gmx::BasicVector']]], | 71 | ····['rawarray_43',·['RawArray',·['../classgmx_1_1BasicVector.xhtml#a24812716e2a9270a0152fa29727d73a4',·1,·'gmx::BasicVector']]], |
72 | ····['rb_44',·['rb',·['../structPreprocessResidue.xhtml#a40d4702332b72348628554714c5fe6dc',·1,·'PreprocessResidue::rb'], | ||
73 | ····· | 72 | ····['rb_44',·['rb',·['../structMoleculePatchDatabase.xhtml#a68aa889f4f9b2e3ff26c7913cdca7b55',·1,·'MoleculePatchDatabase::rb'], |
73 | ········['../structPreprocessResidue.xhtml#a40d4702332b72348628554714c5fe6dc',·1,·'PreprocessResidue::rb'] | ||
74 | ····]], | 74 | ····]], |
75 | ····['rbc_45',·['rbc',·['../namespacegmx_1_1test_1_1anonymous__namespace_02bonded_8cpp_03.xhtml#a219aefff06f511dffecec2c7e9f3f88c',·1,·'gmx::test::anonymous_namespace{bonded.cpp}']]], | 75 | ····['rbc_45',·['rbc',·['../namespacegmx_1_1test_1_1anonymous__namespace_02bonded_8cpp_03.xhtml#a219aefff06f511dffecec2c7e9f3f88c',·1,·'gmx::test::anonymous_namespace{bonded.cpp}']]], |
76 | ····['rbca_46',·['rbcA',·['../namespacegmx_1_1test_1_1anonymous__namespace_02bonded_8cpp_03.xhtml#ace80e7170877cc2e6be5f65830b3d7df',·1,·'gmx::test::anonymous_namespace{bonded.cpp}']]], | 76 | ····['rbca_46',·['rbcA',·['../namespacegmx_1_1test_1_1anonymous__namespace_02bonded_8cpp_03.xhtml#ace80e7170877cc2e6be5f65830b3d7df',·1,·'gmx::test::anonymous_namespace{bonded.cpp}']]], |
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112 | ····['readcheckpoint_70',·['readcheckpoint',·['../classgmx_1_1ITemperatureCouplingImpl.xhtml#a94f280e3751b37b4b109a5ff63054b74',·1,·'gmx::ITemperatureCouplingImpl::readCheckpoint()'], | 112 | ····['readcheckpoint_70',·['readcheckpoint',·['../classgmx_1_1ITemperatureCouplingImpl.xhtml#a94f280e3751b37b4b109a5ff63054b74',·1,·'gmx::ITemperatureCouplingImpl::readCheckpoint()'], |
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114 | ········['../classgmx_1_1NoseHooverTemperatureCoupling.xhtml#ad15e911e803e015e6473f7c1eb7f281c',·1,·'gmx::NoseHooverTemperatureCoupling::readCheckpoint()'], | 113 | ········['../classgmx_1_1NoseHooverTemperatureCoupling.xhtml#ad15e911e803e015e6473f7c1eb7f281c',·1,·'gmx::NoseHooverTemperatureCoupling::readCheckpoint()'], |
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118 | ····['readcheckpointdataholder_72',·['ReadCheckpointDataHolder',·['../classgmx_1_1ReadCheckpointDataHolder.xhtml',·1,·'gmx']]], | 118 | ····['readcheckpointdataholder_72',·['ReadCheckpointDataHolder',·['../classgmx_1_1ReadCheckpointDataHolder.xhtml',·1,·'gmx']]], |
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49 | ····['samplepmf_30',·['samplePmf',·['../classgmx_1_1PointState.xhtml#ac8d8b78b589249e076f4de69de2c5b80',·1,·'gmx::PointState']]], | 49 | ····['samplepmf_30',·['samplePmf',·['../classgmx_1_1PointState.xhtml#ac8d8b78b589249e076f4de69de2c5b80',·1,·'gmx::PointState']]], |
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81 | ········['../group__module__modularsimulator.xhtml#gaa70e5868cd4b8559099c8b687810f8df',·1,·'gmx::ICheckpointHelperClient::saveCheckpointState()'], | ||
82 | ········['../classgmx_1_1FreeEnergyPerturbationData_1_1Element.xhtml#aa845e4a2a85e58b53f868a3bfe74311a',·1,·'gmx::FreeEnergyPerturbationData::Element::saveCheckpointState()'], | ||
83 | ········['../classgmx_1_1FirstOrderPressureCoupling.xhtml#a7215fd9b674948475b7a7394a34cf3e9',·1,·'gmx::FirstOrderPressureCoupling::saveCheckpointState()'], | ||
84 | ········['../classgmx_1_1ExpandedEnsembleElement.xhtml#aa81f8ca220fe300d1c4ea3aa561c7d4d',·1,·'gmx::ExpandedEnsembleElement::saveCheckpointState()'], | ||
85 | ········['../classgmx_1_1EnergyData_1_1Element.xhtml#a955025d3dc2badd068819b0366263f21',·1,·'gmx::EnergyData::Element::saveCheckpointState()'], | ||
87 | ········['../classgmx_1_1PullElement.xhtml#acb46bbfd7f683624c4e04585d7151fae',·1,·'gmx::PullElement::saveCheckpointState()'], | 86 | ········['../classgmx_1_1PullElement.xhtml#acb46bbfd7f683624c4e04585d7151fae',·1,·'gmx::PullElement::saveCheckpointState()'], |
88 | ········['../classgmx_1_1StatePropagatorData_1_1Element.xhtml#aed73d86e0139c581fb13f5a64c3ac591',·1,·'gmx::StatePropagatorData::Element::saveCheckpointState()'] | 87 | ········['../classgmx_1_1StatePropagatorData_1_1Element.xhtml#aed73d86e0139c581fb13f5a64c3ac591',·1,·'gmx::StatePropagatorData::Element::saveCheckpointState()'], |
88 | ········['../classgmx_1_1VelocityScalingTemperatureCoupling.xhtml#a0613305c51cd85f761021905a7cc6000',·1,·'gmx::VelocityScalingTemperatureCoupling::saveCheckpointState()'] | ||
89 | ····]], | 89 | ····]], |
90 | ····['saveedsampointer_54',·['saveEdsamPointer',·['../classgmx_1_1Constraints.xhtml#aa20d0b058932c4e3ff6725444de6499f',·1,·'gmx::Constraints']]], | 90 | ····['saveedsampointer_54',·['saveEdsamPointer',·['../classgmx_1_1Constraints.xhtml#aa20d0b058932c4e3ff6725444de6499f',·1,·'gmx::Constraints']]], |
91 | ····['saxsdebye_55',·['saxsdebye',·['../classgmx_1_1SaxsDebye.xhtml#a678e01fbb38f9e7d22bb5bd2efa414b6',·1,·'gmx::SaxsDebye::SaxsDebye()'], | 91 | ····['saxsdebye_55',·['saxsdebye',·['../classgmx_1_1SaxsDebye.xhtml#a678e01fbb38f9e7d22bb5bd2efa414b6',·1,·'gmx::SaxsDebye::SaxsDebye()'], |
92 | ········['../classgmx_1_1SaxsDebye.xhtml',·1,·'gmx::SaxsDebye'] | 92 | ········['../classgmx_1_1SaxsDebye.xhtml',·1,·'gmx::SaxsDebye'] |
93 | ····]], | 93 | ····]], |
94 | ····['sbase_56',·['sbase',·['../structgmx__ana__poscalc__t.xhtml#a72b00bc053d3b7b79e594b1b6e5fa733',·1,·'gmx_ana_poscalc_t']]], | 94 | ····['sbase_56',·['sbase',·['../structgmx__ana__poscalc__t.xhtml#a72b00bc053d3b7b79e594b1b6e5fa733',·1,·'gmx_ana_poscalc_t']]], |
95 | ····['sblock_57',·['sblock',·['../structgmx_1_1shakedata.xhtml#a119cbdb92204daa557f75d7a14bbeb8c',·1,·'gmx::shakedata']]], | 95 | ····['sblock_57',·['sblock',·['../structgmx_1_1shakedata.xhtml#a119cbdb92204daa557f75d7a14bbeb8c',·1,·'gmx::shakedata']]], |
Offset 113, 17 lines modified | Offset 113, 17 lines modified | ||
113 | ····['sc_5fworkgroupsize_75',·['sc_workGroupSize',·['../namespacegmx.xhtml#ac85e48554e6e1788ea930b7064d371a6',·1,·'gmx']]], | 113 | ····['sc_5fworkgroupsize_75',·['sc_workGroupSize',·['../namespacegmx.xhtml#ac85e48554e6e1788ea930b7064d371a6',·1,·'gmx']]], |
114 | ····['sc_5fxoldwholename_5f_76',·['sc_xOldWholeName_',·['../structgmx_1_1ColvarsForceProviderState.xhtml#a4ae85de69074dadd19c5fc012a3cccc8',·1,·'gmx::ColvarsForceProviderState']]], | 114 | ····['sc_5fxoldwholename_5f_76',·['sc_xOldWholeName_',·['../structgmx_1_1ColvarsForceProviderState.xhtml#a4ae85de69074dadd19c5fc012a3cccc8',·1,·'gmx::ColvarsForceProviderState']]], |
115 | ····['scalar_2eh_77',·['scalar.h',·['../scalar_8h.xhtml',·1,·'']]], | 115 | ····['scalar_2eh_77',·['scalar.h',·['../scalar_8h.xhtml',·1,·'']]], |
116 | ····['scalar_5fmath_2eh_78',·['scalar_math.h',·['../scalar__math_8h.xhtml',·1,·'']]], | 116 | ····['scalar_5fmath_2eh_78',·['scalar_math.h',·['../scalar__math_8h.xhtml',·1,·'']]], |
117 | ····['scalar_5futil_2eh_79',·['scalar_util.h',·['../scalar__util_8h.xhtml',·1,·'']]], | 117 | ····['scalar_5futil_2eh_79',·['scalar_util.h',·['../scalar__util_8h.xhtml',·1,·'']]], |
118 | ····['scalardatatypes_80',·['ScalarDataTypes',·['../structScalarDataTypes.xhtml',·1,·'']]], | 118 | ····['scalardatatypes_80',·['ScalarDataTypes',·['../structScalarDataTypes.xhtml',·1,·'']]], |
119 | ····['scalarforce_81',·['scalarForce',·['../structpull__coord__work__t.xhtml#adde522794352e2ebc796944dcda04204',·1,·'pull_coord_work_t']]], | 119 | ····['scalarforce_81',·['scalarForce',·['../structpull__coord__work__t.xhtml#adde522794352e2ebc796944dcda04204',·1,·'pull_coord_work_t']]], |
120 | ····['scale_82',·['scale',·['../structt__forcetable.xhtml#a74042b613c0660e9d1a66b49147d0159',·1,·'t_forcetable::scale'], | ||
121 | ····· | 120 | ····['scale_82',·['scale',·['../classgmx_1_1MttkData.xhtml#aa587cc1c76049dce893923692e23d769',·1,·'gmx::MttkData::scale()'], |
122 | ········['../structPmeGpuDynamicParams.xhtml#a5c019da79bddcfb0ac07f2a757a269bc',·1,·'PmeGpuDynamicParams::scale'] | 121 | ········['../structPmeGpuDynamicParams.xhtml#a5c019da79bddcfb0ac07f2a757a269bc',·1,·'PmeGpuDynamicParams::scale'], |
122 | ········['../structt__forcetable.xhtml#a74042b613c0660e9d1a66b49147d0159',·1,·'t_forcetable::scale'] | ||
123 | ····]], | 123 | ····]], |
124 | ····['scaleall_83',·['scaleAll',·['../classgmx_1_1AbstractAverageHistogram.xhtml#a749915682fa7728ee088dfd6726b1736',·1,·'gmx::AbstractAverageHistogram']]], | 124 | ····['scaleall_83',·['scaleAll',·['../classgmx_1_1AbstractAverageHistogram.xhtml#a749915682fa7728ee088dfd6726b1736',·1,·'gmx::AbstractAverageHistogram']]], |
125 | ····['scaleallbyvector_84',·['scaleAllByVector',·['../classgmx_1_1AbstractAverageHistogram.xhtml#aabe3becd12550d662e727afbd168f433',·1,·'gmx::AbstractAverageHistogram']]], | 125 | ····['scaleallbyvector_84',·['scaleAllByVector',·['../classgmx_1_1AbstractAverageHistogram.xhtml#aabe3becd12550d662e727afbd168f433',·1,·'gmx::AbstractAverageHistogram']]], |
126 | ····['scalebox_85',·['scaleBox',·['../classEwaldBoxZScaler.xhtml#a67431757f83b309cf81b3cf96eabe7bf',·1,·'EwaldBoxZScaler']]], | 126 | ····['scalebox_85',·['scaleBox',·['../classEwaldBoxZScaler.xhtml#a67431757f83b309cf81b3cf96eabe7bf',·1,·'EwaldBoxZScaler']]], |
127 | ····['scalebyvector_86',·['scaleByVector',·['../namespacegmx.xhtml#ae92e5fa525c52dcde660bb171c3fe5a2',·1,·'gmx']]], | 127 | ····['scalebyvector_86',·['scaleByVector',·['../namespacegmx.xhtml#ae92e5fa525c52dcde660bb171c3fe5a2',·1,·'gmx']]], |
128 | ····['scalecoordinates_87',·['scaleCoordinates',·['../classgmx_1_1UpdateConstrainGpu_1_1Impl.xhtml#a9376d1cbbecb20c18661950973814d0d',·1,·'gmx::UpdateConstrainGpu::Impl']]], | 128 | ····['scalecoordinates_87',·['scaleCoordinates',·['../classgmx_1_1UpdateConstrainGpu_1_1Impl.xhtml#a9376d1cbbecb20c18661950973814d0d',·1,·'gmx::UpdateConstrainGpu::Impl']]], |
129 | ····['scaled_5flagrange_5fmultiplier_88',·['scaled_lagrange_multiplier',·['../structgmx_1_1shakedata.xhtml#adde8f58fcb5ada8d634039c00ca42a58',·1,·'gmx::shakedata']]], | 129 | ····['scaled_5flagrange_5fmultiplier_88',·['scaled_lagrange_multiplier',·['../structgmx_1_1shakedata.xhtml#adde8f58fcb5ada8d634039c00ca42a58',·1,·'gmx::shakedata']]], |
Offset 136, 16 lines modified | Offset 136, 16 lines modified | ||
136 | ····]], | 136 | ····]], |
137 | ····['scalesingle_94',·['scaleSingle',·['../classgmx_1_1AbstractAverageHistogram.xhtml#abb37138b6fef236b38b46177ab3a7f16',·1,·'gmx::AbstractAverageHistogram']]], | 137 | ····['scalesingle_94',·['scaleSingle',·['../classgmx_1_1AbstractAverageHistogram.xhtml#abb37138b6fef236b38b46177ab3a7f16',·1,·'gmx::AbstractAverageHistogram']]], |
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Offset 64, 55 lines modified | Offset 64, 55 lines modified | ||
64 | ····['tableinteraction_49',·['TableInteraction',·['../forcetable_8h.xhtml#a5ab83e2e3173b76df0ca2b9ca595040c',·1,·'forcetable.h']]], | 64 | ····['tableinteraction_49',·['TableInteraction',·['../forcetable_8h.xhtml#a5ab83e2e3173b76df0ca2b9ca595040c',·1,·'forcetable.h']]], |
65 | ····['tablesoffsets_50',·['tablesOffsets',·['../structPmeGpuGridParams.xhtml#a705c9e648f29b1dc77275482d31b5e2e',·1,·'PmeGpuGridParams']]], | 65 | ····['tablesoffsets_50',·['tablesOffsets',·['../structPmeGpuGridParams.xhtml#a705c9e648f29b1dc77275482d31b5e2e',·1,·'PmeGpuGridParams']]], |
66 | ····['tablespacing_51',·['tablespacing',·['../classgmx_1_1CubicSplineTable.xhtml#a68e69e9f9e7653a0f59b4417d9278055',·1,·'gmx::CubicSplineTable::tableSpacing()'], | 66 | ····['tablespacing_51',·['tablespacing',·['../classgmx_1_1CubicSplineTable.xhtml#a68e69e9f9e7653a0f59b4417d9278055',·1,·'gmx::CubicSplineTable::tableSpacing()'], |
67 | ········['../classgmx_1_1QuadraticSplineTable.xhtml#a01c2df243de4371cf4c88ed712073ec4',·1,·'gmx::QuadraticSplineTable::tableSpacing()'] | 67 | ········['../classgmx_1_1QuadraticSplineTable.xhtml#a01c2df243de4371cf4c88ed712073ec4',·1,·'gmx::QuadraticSplineTable::tableSpacing()'] |
68 | ····]], | 68 | ····]], |
69 | ····['tabulated_5fbonded_5finteractions_2ecpp_52',·['tabulated_bonded_interactions.cpp',·['../tabulated__bonded__interactions_8cpp.xhtml',·1,·'']]], | 69 | ····['tabulated_5fbonded_5finteractions_2ecpp_52',·['tabulated_bonded_interactions.cpp',·['../tabulated__bonded__interactions_8cpp.xhtml',·1,·'']]], |
70 | ····['tabulated_5fpot_53',·['tabulated_pot',·['../gmx__wham_8cpp.xhtml#a0274f4fbc68349f4127af1ea77473b89',·1,·'gmx_wham.cpp']]], | 70 | ····['tabulated_5fpot_53',·['tabulated_pot',·['../gmx__wham_8cpp.xhtml#a0274f4fbc68349f4127af1ea77473b89',·1,·'gmx_wham.cpp']]], |
71 | ····['tabulatednormaldistribution_54',·['tabulatednormaldistribution',·['../classgmx_1_1TabulatedNormalDistribution.xhtml#a | 71 | ····['tabulatednormaldistribution_54',·['tabulatednormaldistribution',·['../classgmx_1_1TabulatedNormalDistribution.xhtml#ad090e6c16ba8f5b3a5408d8c07788dd3',·1,·'gmx::TabulatedNormalDistribution::TabulatedNormalDistribution(const·param_type·&param)'], |
72 | ········['../classgmx_1_1TabulatedNormalDistribution.xhtml#abb053676a2ca8ed4f5a9908bc70f25a7',·1,·'gmx::TabulatedNormalDistribution::TabulatedNormalDistribution(result_type·mean=0.0,·result_type·stddev=1.0)'], | ||
72 | ········['../classgmx_1_1TabulatedNormalDistribution.xhtml',·1,·'gmx::TabulatedNormalDistribution<·RealType,·tableBits·>'] | 73 | ········['../classgmx_1_1TabulatedNormalDistribution.xhtml',·1,·'gmx::TabulatedNormalDistribution<·RealType,·tableBits·>'] |
73 | ········['../classgmx_1_1TabulatedNormalDistribution.xhtml#ad090e6c16ba8f5b3a5408d8c07788dd3',·1,·'gmx::TabulatedNormalDistribution::TabulatedNormalDistribution()'] | ||
74 | ····]], | 74 | ····]], |
75 | ····['tabulatednormaldistribution_2ecpp_55',·['tabulatednormaldistribution.cpp',·['../tests_2tabulatednormaldistribution_8cpp.xhtml',·1,·'']]], | 75 | ····['tabulatednormaldistribution_2ecpp_55',·['tabulatednormaldistribution.cpp',·['../tests_2tabulatednormaldistribution_8cpp.xhtml',·1,·'']]], |
76 | ····['tabulatednormaldistribution_2eh_56',·['tabulatednormaldistribution.h',·['../tabulatednormaldistribution_8h.xhtml',·1,·'']]], | 76 | ····['tabulatednormaldistribution_2eh_56',·['tabulatednormaldistribution.h',·['../tabulatednormaldistribution_8h.xhtml',·1,·'']]], |
77 | ····['tabulatestructurefactors_57',·['tabulateStructureFactors',·['../ewald_8cpp.xhtml#aa3544b10e91b5c8dcfa5a114a5bc5a96',·1,·'ewald.cpp']]], | 77 | ····['tabulatestructurefactors_57',·['tabulateStructureFactors',·['../ewald_8cpp.xhtml#aa3544b10e91b5c8dcfa5a114a5bc5a96',·1,·'ewald.cpp']]], |
78 | ····['tag_58',·['tag',·['../group__module__modularsimulator.xhtml#ga049d88cc31c3267253efbde42699ad28',·1,·'gmx::PropagatorConnection']]], | 78 | ····['tag_58',·['tag',·['../group__module__modularsimulator.xhtml#ga049d88cc31c3267253efbde42699ad28',·1,·'gmx::PropagatorConnection']]], |
79 | ····['tan_59',·['tan',·['../namespacegmx.xhtml#a7063173231453ec737688c8d91aa0749',·1,·'gmx::tan(float·x)'], | ||
80 | ····· | 79 | ····['tan_59',·['tan',·['../namespacegmx.xhtml#a45e727a4960ac7f8ba5149f9b251c520',·1,·'gmx::tan(double·x)'], |
80 | ········['../namespacegmx.xhtml#a7063173231453ec737688c8d91aa0749',·1,·'gmx::tan(float·x)'] | ||
81 | ····]], | 81 | ····]], |
82 | ····['tansingleaccuracy_60',·['tanSingleAccuracy',·['../namespacegmx.xhtml#a0f979f3defa4f725cfce2d7e93fc0d9e',·1,·'gmx']]], | 82 | ····['tansingleaccuracy_60',·['tanSingleAccuracy',·['../namespacegmx.xhtml#a0f979f3defa4f725cfce2d7e93fc0d9e',·1,·'gmx']]], |
83 | ····['target_61',·['target',·['../ | 83 | ····['target_61',·['target',·['../classgmx_1_1PointState.xhtml#a573114820ae0977c2eb9c666068351fd',·1,·'gmx::PointState::target()'], |
84 | ········['../namespacegmx.xhtml#aed0429233bc357e419dafee7b8bd1344ac41a31890959544c6523af684561abe5',·1,·'gmx::Target'], | 84 | ········['../namespacegmx.xhtml#aed0429233bc357e419dafee7b8bd1344ac41a31890959544c6523af684561abe5',·1,·'gmx::Target'], |
85 | ········['../c | 85 | ········['../namespaceanonymous__namespace_02edsam_8cpp_03.xhtml#ae261c5a75fa1c55507798631058dd98aac41a31890959544c6523af684561abe5',·1,·'anonymous_namespace{edsam.cpp}::Target'] |
86 | ····]], | 86 | ····]], |
87 | ····['targetbinsize_62',·['targetbinsize',·['../structmethoddata__insolidangle.xhtml#a17572bdc8c982bc6913a351b6b84ada6',·1,·'methoddata_insolidangle']]], | 87 | ····['targetbinsize_62',·['targetbinsize',·['../structmethoddata__insolidangle.xhtml#a17572bdc8c982bc6913a351b6b84ada6',·1,·'methoddata_insolidangle']]], |
88 | ····['targeterror_63',·['TargetError',·['../namespacegmx.xhtml#aa78c6481d10a93316c155ffdf021e581a461586ff73a95486e167031a14a63505',·1,·'gmx']]], | 88 | ····['targeterror_63',·['TargetError',·['../namespacegmx.xhtml#aa78c6481d10a93316c155ffdf021e581a461586ff73a95486e167031a14a63505',·1,·'gmx']]], |
89 | ····['targetmetricscalinglimit_64',·['targetMetricScalingLimit',·['../classgmx_1_1BiasParams.xhtml#ac7f8b46646c1728c7b6938077dff82f6',·1,·'gmx::BiasParams']]], | 89 | ····['targetmetricscalinglimit_64',·['targetMetricScalingLimit',·['../classgmx_1_1BiasParams.xhtml#ac7f8b46646c1728c7b6938077dff82f6',·1,·'gmx::BiasParams']]], |
90 | ····['task_65',·['task',·['../classgmx_1_1Lincs.xhtml#add4a8ebb5f4f323ded4a65a105eb9830',·1,·'gmx::Lincs::task'], | ||
91 | ····· | 90 | ····['task_65',·['task',·['../structanonymous__namespace_02lincs_8cpp_03_1_1Task.xhtml',·1,·'anonymous_namespace{lincs.cpp}::Task'], |
91 | ········['../classgmx_1_1Lincs.xhtml#add4a8ebb5f4f323ded4a65a105eb9830',·1,·'gmx::Lincs::task'] | ||
92 | ····]], | 92 | ····]], |
93 | ····['task_20scheduling_66',·['Task·scheduling',·['../page_modularsimulator.xhtml#autotoc_md18',·1,·'']]], | 93 | ····['task_20scheduling_66',·['Task·scheduling',·['../page_modularsimulator.xhtml#autotoc_md18',·1,·'']]], |
94 | ····['task_5f_67',·['task_',·['../structgmx_1_1GpuTaskMapping.xhtml#a223bdfc8230aa17421c2de16cbf4ce81',·1,·'gmx::GpuTaskMapping']]], | 94 | ····['task_5f_67',·['task_',·['../structgmx_1_1GpuTaskMapping.xhtml#a223bdfc8230aa17421c2de16cbf4ce81',·1,·'gmx::GpuTaskMapping']]], |
95 | ····['taskassignment_68',·['Assigning·simulation·tasks·to·hardware·(taskassignment)',·['../group__module__taskassignment.xhtml',·1,·'']]], | 95 | ····['taskassignment_68',·['Assigning·simulation·tasks·to·hardware·(taskassignment)',·['../group__module__taskassignment.xhtml',·1,·'']]], |
96 | ····['taskassignment_2ecpp_69',·['taskassignment.cpp',·['../taskassignment_8cpp.xhtml',·1,·'']]], | 96 | ····['taskassignment_2ecpp_69',·['taskassignment.cpp',·['../taskassignment_8cpp.xhtml',·1,·'']]], |
97 | ····['taskassignment_2eh_70',·['taskassignment.h',·['../taskassignment_8h.xhtml',·1,·'']]], | 97 | ····['taskassignment_2eh_70',·['taskassignment.h',·['../taskassignment_8h.xhtml',·1,·'']]], |
98 | ····['tasks_20to_20hardware_20taskassignment_71',·['Assigning·simulation·tasks·to·hardware·(taskassignment)',·['../group__module__taskassignment.xhtml',·1,·'']]], | 98 | ····['tasks_20to_20hardware_20taskassignment_71',·['Assigning·simulation·tasks·to·hardware·(taskassignment)',·['../group__module__taskassignment.xhtml',·1,·'']]], |
99 | ····['tasktarget_72',·['TaskTarget',·['../namespacegmx.xhtml#aacf83788a301a602c40e8a49fce9c5e8',·1,·'gmx']]], | 99 | ····['tasktarget_72',·['TaskTarget',·['../namespacegmx.xhtml#aacf83788a301a602c40e8a49fce9c5e8',·1,·'gmx']]], |
100 | ····['tau_73',·['tau',·['../structt__UmbrellaWindow.xhtml#a4a7d5d96a6026b0db6cc024d590e4ba6',·1,·'t_UmbrellaWindow::tau'], | ||
100 | ···· | 101 | ········['../structanonymous__namespace_02edsam_8cpp_03_1_1t__edflood.xhtml#ae44c5c0ce2cb51e35e160b41feae02d0',·1,·'anonymous_namespace{edsam.cpp}::t_edflood::tau'] |
101 | ········['../structt__UmbrellaWindow.xhtml#a4a7d5d96a6026b0db6cc024d590e4ba6',·1,·'t_UmbrellaWindow::tau'] | ||
102 | ····]], | 102 | ····]], |
103 | ····['tausmooth_74',·['tausmooth',·['../structt__UmbrellaWindow.xhtml#adca5c639bf77415ff74cdd36259747ac',·1,·'t_UmbrellaWindow']]], | 103 | ····['tausmooth_74',·['tausmooth',·['../structt__UmbrellaWindow.xhtml#adca5c639bf77415ff74cdd36259747ac',·1,·'t_UmbrellaWindow']]], |
104 | ····['tbin_75',·['tbin',·['../structmethoddata__insolidangle.xhtml#a8e051ab9e3b8939ceaf35aea4b20c980',·1,·'methoddata_insolidangle']]], | 104 | ····['tbin_75',·['tbin',·['../structmethoddata__insolidangle.xhtml#a8e051ab9e3b8939ceaf35aea4b20c980',·1,·'methoddata_insolidangle']]], |
105 | ····['tbinsize_76',·['tbinsize',·['../structmethoddata__insolidangle.xhtml#a37c045688253e214ec4f38582c565d5a',·1,·'methoddata_insolidangle']]], | 105 | ····['tbinsize_76',·['tbinsize',·['../structmethoddata__insolidangle.xhtml#a37c045688253e214ec4f38582c565d5a',·1,·'methoddata_insolidangle']]], |
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7 | ····['uint8_1',·['uInt8',·['../namespacegmx.xhtml#a4355a7e0f393d42cbb5b2a47aefea966ab0cffa75aa037e628ccfdf46bcc086ac',·1,·'gmx']]], | 7 | ····['uint8_1',·['uInt8',·['../namespacegmx.xhtml#a4355a7e0f393d42cbb5b2a47aefea966ab0cffa75aa037e628ccfdf46bcc086ac',·1,·'gmx']]], |
8 | ····['ulptol_5f_2',·['ulpTol_',·['../classgmx_1_1test_1_1SimdBaseTest.xhtml#a9e2abac54e05356364ecdb0751e8665b',·1,·'gmx::test::SimdBaseTest']]], | 8 | ····['ulptol_5f_2',·['ulpTol_',·['../classgmx_1_1test_1_1SimdBaseTest.xhtml#a9e2abac54e05356364ecdb0751e8665b',·1,·'gmx::test::SimdBaseTest']]], |
9 | ····['ulptolerance_3',·['ulpTolerance',·['../group__module__testutils.xhtml#gaba89bc71f24fe31ec8f9c07835a245fc',·1,·'gmx::test::FloatingPointTolerance']]], | 9 | ····['ulptolerance_3',·['ulpTolerance',·['../group__module__testutils.xhtml#gaba89bc71f24fe31ec8f9c07835a245fc',·1,·'gmx::test::FloatingPointTolerance']]], |
10 | ····['umbrellagridpoint_4',·['umbrellaGridpoint',·['../classgmx_1_1CoordState.xhtml#a714530cf26b77af8bff5d1318c129b11',·1,·'gmx::CoordState']]], | 10 | ····['umbrellagridpoint_4',·['umbrellaGridpoint',·['../classgmx_1_1CoordState.xhtml#a714530cf26b77af8bff5d1318c129b11',·1,·'gmx::CoordState']]], |
11 | ····['umbrellaoptions_5',·['UmbrellaOptions',·['../structUmbrellaOptions.xhtml',·1,·'']]], | 11 | ····['umbrellaoptions_5',·['UmbrellaOptions',·['../structUmbrellaOptions.xhtml',·1,·'']]], |
12 | ····['unavailable_6',·['Unavailable',·['../device__information_8h.xhtml#a0b85af2bfbb9599409b639e98717c888a453e6aa38d87b28ccae545967c53004f',·1,·'device_information.h']]], | 12 | ····['unavailable_6',·['Unavailable',·['../device__information_8h.xhtml#a0b85af2bfbb9599409b639e98717c888a453e6aa38d87b28ccae545967c53004f',·1,·'device_information.h']]], |
13 | ····['unconstrainedsystemstotest_5fg_7',·['unconstrainedSystemsToTest_g',·['../namespacegmx_1_1test_1_1anonymous__namespace_02minimize_8cpp_03.xhtml#ab01bb0a722ccdd5edb87a7c898af7615',·1,·'gmx::test::anonymous_namespace{minimize.cpp}']]], | 13 | ····['unconstrainedsystemstotest_5fg_7',·['unconstrainedSystemsToTest_g',·['../namespacegmx_1_1test_1_1anonymous__namespace_02minimize_8cpp_03.xhtml#ab01bb0a722ccdd5edb87a7c898af7615',·1,·'gmx::test::anonymous_namespace{minimize.cpp}']]], |
14 | ····['undefined_8',·['undefined',·['../namespacegmx_1_1test.xhtml#a5b76a571a22b4c47f7dab283e6674154aec0fc0100c4fc1ce4eea230c3dc10360',·1,·'gmx::test::Undefined'], | ||
14 | ···· | 15 | ········['../namespaceanonymous__namespace_02histogram_8cpp_03.xhtml#a5b8a8a888bca187bb11799895c7a766e',·1,·'anonymous_namespace{histogram.cpp}::UNDEFINED'] |
15 | ········['../namespacegmx_1_1test.xhtml#a5b76a571a22b4c47f7dab283e6674154aec0fc0100c4fc1ce4eea230c3dc10360',·1,·'gmx::test::Undefined'] | ||
16 | ····]], | 16 | ····]], |
17 | ····['uniform_5fload_5fcluster_5fpair_5fdata_9',·['UNIFORM_LOAD_CLUSTER_PAIR_DATA',·['../nbnxm__sycl__kernel__utils_8h.xhtml#ade8af812c46261b419b718d9c9cb14a8',·1,·'nbnxm_sycl_kernel_utils.h']]], | 17 | ····['uniform_5fload_5fcluster_5fpair_5fdata_9',·['UNIFORM_LOAD_CLUSTER_PAIR_DATA',·['../nbnxm__sycl__kernel__utils_8h.xhtml#ade8af812c46261b419b718d9c9cb14a8',·1,·'nbnxm_sycl_kernel_utils.h']]], |
18 | ····['uniformintdistribution_10',·['uniformintdistribution',·['../classgmx_1_1UniformIntDistribution.xhtml#a790697adc208c8ecf2e9164ea00cf24b',·1,·'gmx::UniformIntDistribution::UniformIntDistribution()'], | 18 | ····['uniformintdistribution_10',·['uniformintdistribution',·['../classgmx_1_1UniformIntDistribution.xhtml#a790697adc208c8ecf2e9164ea00cf24b',·1,·'gmx::UniformIntDistribution::UniformIntDistribution()'], |
19 | ········['../classgmx_1_1UniformIntDistribution.xhtml',·1,·'gmx::UniformIntDistribution<·IntType·>'], | 19 | ········['../classgmx_1_1UniformIntDistribution.xhtml',·1,·'gmx::UniformIntDistribution<·IntType·>'], |
20 | ········['../classgmx_1_1UniformIntDistribution.xhtml#a09808fada94acf89dc12c30310afaeda',·1,·'gmx::UniformIntDistribution::UniformIntDistribution()'] | 20 | ········['../classgmx_1_1UniformIntDistribution.xhtml#a09808fada94acf89dc12c30310afaeda',·1,·'gmx::UniformIntDistribution::UniformIntDistribution()'] |
21 | ····]], | 21 | ····]], |
22 | ····['uniformintdistribution_2ecpp_11',·['uniformintdistribution.cpp',·['../uniformintdistribution_8cpp.xhtml',·1,·'']]], | 22 | ····['uniformintdistribution_2ecpp_11',·['uniformintdistribution.cpp',·['../uniformintdistribution_8cpp.xhtml',·1,·'']]], |
Offset 44, 16 lines modified | Offset 44, 16 lines modified | ||
44 | ····['unitcelltype_26',·['UnitCellType',·['../namespacegmx.xhtml#af897bff42be729e6eaf3c4dc6e199722',·1,·'gmx']]], | 44 | ····['unitcelltype_26',·['UnitCellType',·['../namespacegmx.xhtml#af897bff42be729e6eaf3c4dc6e199722',·1,·'gmx']]], |
45 | ····['unitcelltypenames_27',·['unitCellTypeNames',·['../namespacegmx.xhtml#ae81efb97e81499b750d906d26a29ce18',·1,·'gmx']]], | 45 | ····['unitcelltypenames_27',·['unitCellTypeNames',·['../namespacegmx.xhtml#ae81efb97e81499b750d906d26a29ce18',·1,·'gmx']]], |
46 | ····['unittest_5fmain_2ecpp_28',·['unittest_main.cpp',·['../unittest__main_8cpp.xhtml',·1,·'']]], | 46 | ····['unittest_5fmain_2ecpp_28',·['unittest_main.cpp',·['../unittest__main_8cpp.xhtml',·1,·'']]], |
47 | ····['unitvector_29',·['unitvector',·['../namespacegmx.xhtml#a5bc71ede59923e4d25b11a995139970a',·1,·'gmx::unitVector()'], | 47 | ····['unitvector_29',·['unitvector',·['../namespacegmx.xhtml#a5bc71ede59923e4d25b11a995139970a',·1,·'gmx::unitVector()'], |
48 | ········['../classgmx_1_1BasicVector.xhtml#a4e7218ba6cbb3bc735e31a43597ec7a9',·1,·'gmx::BasicVector::unitVector()'] | 48 | ········['../classgmx_1_1BasicVector.xhtml#a4e7218ba6cbb3bc735e31a43597ec7a9',·1,·'gmx::BasicVector::unitVector()'] |
49 | ····]], | 49 | ····]], |
50 | ····['unity_30',·['Unity',·['../namespacegmx.xhtml#ab0ad78613a262a1d4fcce5d18525099fa82dd98f1d663acc318e6a8ec4ab69b7a',·1,·'gmx']]], | 50 | ····['unity_30',·['Unity',·['../namespacegmx.xhtml#ab0ad78613a262a1d4fcce5d18525099fa82dd98f1d663acc318e6a8ec4ab69b7a',·1,·'gmx']]], |
51 | ····['unknown_31',·['unknown',·['../namespacegmx.xhtml#a20e189e3f31f5f1e8581a5cc84063453a88183b946cc5f0e8c96b2e66e1c74a7e',·1,·'gmx::Unknown'], | ||
52 | ····· | 51 | ····['unknown_31',·['unknown',·['../device__information_8h.xhtml#a5514710e3c78d4816da9e8d2e3cd508ca88183b946cc5f0e8c96b2e66e1c74a7e',·1,·'Unknown: device_information.h'], |
52 | ········['../namespacegmx.xhtml#a20e189e3f31f5f1e8581a5cc84063453a88183b946cc5f0e8c96b2e66e1c74a7e',·1,·'gmx::Unknown'], | ||
53 | ········['../classgmx_1_1CpuInfo.xhtml#acd7ff27553f3ff9fd1037c30c21a24f1a88183b946cc5f0e8c96b2e66e1c74a7e',·1,·'gmx::CpuInfo::Unknown'] | 53 | ········['../classgmx_1_1CpuInfo.xhtml#acd7ff27553f3ff9fd1037c30c21a24f1a88183b946cc5f0e8c96b2e66e1c74a7e',·1,·'gmx::CpuInfo::Unknown'] |
54 | ····]], | 54 | ····]], |
55 | ····['unpackandaddhalointernal_32',·['UnpackAndAddHaloInternal',·['../classUnpackAndAddHaloInternal.xhtml',·1,·'']]], | 55 | ····['unpackandaddhalointernal_32',·['UnpackAndAddHaloInternal',·['../classUnpackAndAddHaloInternal.xhtml',·1,·'']]], |
56 | ····['unpackhaloexternal_33',·['UnpackHaloExternal',·['../classUnpackHaloExternal.xhtml',·1,·'']]], | 56 | ····['unpackhaloexternal_33',·['UnpackHaloExternal',·['../classUnpackHaloExternal.xhtml',·1,·'']]], |
57 | ····['unpackrecvbufkernel_34',·['unpackRecvBufKernel',·['../namespacegmx.xhtml#a704128fa72f8ce7dcf08d0063a166036',·1,·'gmx']]], | 57 | ····['unpackrecvbufkernel_34',·['unpackRecvBufKernel',·['../namespacegmx.xhtml#a704128fa72f8ce7dcf08d0063a166036',·1,·'gmx']]], |
58 | ····['unpaddedarrayref_35',·['unpaddedArrayRef',·['../classgmx_1_1ArrayRefWithPadding.xhtml#ad5b878ca7749f5b8f52e006269fbfc2f',·1,·'gmx::ArrayRefWithPadding']]], | 58 | ····['unpaddedarrayref_35',·['unpaddedArrayRef',·['../classgmx_1_1ArrayRefWithPadding.xhtml#ad5b878ca7749f5b8f52e006269fbfc2f',·1,·'gmx::ArrayRefWithPadding']]], |
59 | ····['unpaddedconstarrayref_36',·['unpaddedConstArrayRef',·['../classgmx_1_1ArrayRefWithPadding.xhtml#a2c3f73497c6bc71264ae1af84b6522ae',·1,·'gmx::ArrayRefWithPadding']]], | 59 | ····['unpaddedconstarrayref_36',·['unpaddedConstArrayRef',·['../classgmx_1_1ArrayRefWithPadding.xhtml#a2c3f73497c6bc71264ae1af84b6522ae',·1,·'gmx::ArrayRefWithPadding']]], |
Offset 195, 35 lines modified | Offset 195, 35 lines modified | ||
195 | ····['useljpme_141',·['useLJPme',·['../structgmx_1_1test_1_1anonymous__namespace_02kernel__test_8cpp_03_1_1KernelOptions.xhtml#ab17bfbb74b089a36773ad0e2f56b704f',·1,·'gmx::test::anonymous_namespace{kernel_test.cpp}::KernelOptions']]], | 195 | ····['useljpme_141',·['useLJPme',·['../structgmx_1_1test_1_1anonymous__namespace_02kernel__test_8cpp_03_1_1KernelOptions.xhtml#ab17bfbb74b089a36773ad0e2f56b704f',·1,·'gmx::test::anonymous_namespace{kernel_test.cpp}::KernelOptions']]], |
196 | ····['usemdgpugraph_142',·['usemdgpugraph',·['../structgmx__pme__pp.xhtml#a5ca26c02e2042980d7262c36a11b41ae',·1,·'gmx_pme_pp::useMdGpuGraph'], | 196 | ····['usemdgpugraph_142',·['usemdgpugraph',·['../structgmx__pme__pp.xhtml#a5ca26c02e2042980d7262c36a11b41ae',·1,·'gmx_pme_pp::useMdGpuGraph'], |
197 | ········['../classgmx_1_1SimulationWorkload.xhtml#a76cb5c0c6b1dcb6f85e381dfbfc5046f',·1,·'gmx::SimulationWorkload::useMdGpuGraph'] | 197 | ········['../classgmx_1_1SimulationWorkload.xhtml#a76cb5c0c6b1dcb6f85e381dfbfc5046f',·1,·'gmx::SimulationWorkload::useMdGpuGraph'] |
198 | ····]], | 198 | ····]], |
199 | ····['usemolpbc_5f_143',·['useMolPbc_',·['../structgmx_1_1DomainInfo.xhtml#a0be60b2e021896a2f0a40b1107a3bf61',·1,·'gmx::DomainInfo']]], | 199 | ····['usemolpbc_5f_143',·['useMolPbc_',·['../structgmx_1_1DomainInfo.xhtml#a0be60b2e021896a2f0a40b1107a3bf61',·1,·'gmx::DomainInfo']]], |
200 | ····['usemts_144',·['useMts',·['../classgmx_1_1SimulationWorkload.xhtml#ac585c3fa9df3937cb8ae629aa07df131',·1,·'gmx::SimulationWorkload']]], | 200 | ····['usemts_144',·['useMts',·['../classgmx_1_1SimulationWorkload.xhtml#ac585c3fa9df3937cb8ae629aa07df131',·1,·'gmx::SimulationWorkload']]], |
201 | ····['usendxfromdatabase_145',·['useNdxFromDatabase',·['../classgmx_1_1test_1_1SimulationRunner.xhtml#a138218ca058abe7950f5bf9a5b30b0f7',·1,·'gmx::test::SimulationRunner']]], | 201 | ····['usendxfromdatabase_145',·['useNdxFromDatabase',·['../classgmx_1_1test_1_1SimulationRunner.xhtml#a138218ca058abe7950f5bf9a5b30b0f7',·1,·'gmx::test::SimulationRunner']]], |
202 | ····['usenvshmem_146',·['usenvshmem',·['../ | 202 | ····['usenvshmem_146',·['usenvshmem',·['../structPmeGpuKernelParamsBase.xhtml#a3d2ccf4da28abf4f9b7c7105413f31a3',·1,·'PmeGpuKernelParamsBase::useNvshmem'], |
203 | ········['../structgmx__pme__pp.xhtml#ab6ada3585bcb5d11417e20579c9842bd',·1,·'gmx_pme_pp::useNvshmem'], | 203 | ········['../structgmx__pme__pp.xhtml#ab6ada3585bcb5d11417e20579c9842bd',·1,·'gmx_pme_pp::useNvshmem'], |
204 | ········['../s | 204 | ········['../classgmx_1_1SimulationWorkload.xhtml#ac092afa60701acf7cdcb00032c48172f',·1,·'gmx::SimulationWorkload::useNvshmem'] |
205 | ····]], | 205 | ····]], |
206 | ····['useonlymtscombinedforcebuffer_147',·['useOnlyMtsCombinedForceBuffer',·['../classgmx_1_1StepWorkload.xhtml#a457f1f1072fc3c9c0f5fb089b92f5f90',·1,·'gmx::StepWorkload']]], | 206 | ····['useonlymtscombinedforcebuffer_147',·['useOnlyMtsCombinedForceBuffer',·['../classgmx_1_1StepWorkload.xhtml#a457f1f1072fc3c9c0f5fb089b92f5f90',·1,·'gmx::StepWorkload']]], |
207 | ····['usepipeline_148',·['usePipeline',·['../structPmeGpuKernelParamsBase.xhtml#a489a09754001d0776d2dca26bb1b938d',·1,·'PmeGpuKernelParamsBase']]], | 207 | ····['usepipeline_148',·['usePipeline',·['../structPmeGpuKernelParamsBase.xhtml#a489a09754001d0776d2dca26bb1b938d',·1,·'PmeGpuKernelParamsBase']]], |
208 | ····['usercoordunitstointernal_149',·['userCoordUnitsToInternal',·['../structgmx_1_1DimParams_1_1PullDimParams.xhtml#ab4dac5ae0abd7d7ac4abce1a3ebb3f08',·1,·'gmx::DimParams::PullDimParams']]], | 208 | ····['usercoordunitstointernal_149',·['userCoordUnitsToInternal',·['../structgmx_1_1DimParams_1_1PullDimParams.xhtml#ab4dac5ae0abd7d7ac4abce1a3ebb3f08',·1,·'gmx::DimParams::PullDimParams']]], |
209 | ····['usercoordunitstointernal_5f_150',·['userCoordUnitsToInternal_',·['../structgmx_1_1DimParams.xhtml#a6bc5656f8c83287c262adf1ca79b1515',·1,·'gmx::DimParams']]], | 209 | ····['usercoordunitstointernal_5f_150',·['userCoordUnitsToInternal_',·['../structgmx_1_1DimParams.xhtml#a6bc5656f8c83287c262adf1ca79b1515',·1,·'gmx::DimParams']]], |
210 | ····['userdefinedfloat_5f_151',·['userDefinedFloat_',·['../structgmx_1_1MrcDensityMapHeader.xhtml#abec7c46e44fcc58659f2e4f08ce3ca69',·1,·'gmx::MrcDensityMapHeader']]], | 210 | ····['userdefinedfloat_5f_151',·['userDefinedFloat_',·['../structgmx_1_1MrcDensityMapHeader.xhtml#abec7c46e44fcc58659f2e4f08ce3ca69',·1,·'gmx::MrcDensityMapHeader']]], |
211 | ····['usergpuids_2ecpp_152',·['usergpuids.cpp',·['../usergpuids_8cpp.xhtml',·1,·'(Global·Namespace)'], | 211 | ····['usergpuids_2ecpp_152',·['usergpuids.cpp',·['../tests_2usergpuids_8cpp.xhtml',·1,·'(Global·Namespace)'], |
212 | ········['../ | 212 | ········['../usergpuids_8cpp.xhtml',·1,·'(Global·Namespace)'] |
213 | ····]], | 213 | ····]], |
214 | ····['usergpuids_2eh_153',·['usergpuids.h',·['../usergpuids_8h.xhtml',·1,·'']]], | 214 | ····['usergpuids_2eh_153',·['usergpuids.h',·['../usergpuids_8h.xhtml',·1,·'']]], |
215 | ····['usergputaskassignment_154',·['userGpuTaskAssignment',·['../structgmx__hw__opt__t.xhtml#aa385ff3c0e1cad123e457fa57756f6d9',·1,·'gmx_hw_opt_t']]], | 215 | ····['usergputaskassignment_154',·['userGpuTaskAssignment',·['../structgmx__hw__opt__t.xhtml#aa385ff3c0e1cad123e457fa57756f6d9',·1,·'gmx_hw_opt_t']]], |
216 | ····['userinputerror_155',·['userinputerror',·['../classgmx_1_1UserInputError.xhtml#a07ae9dc1612508d54e18079cebdc4316',·1,·'gmx::UserInputError::UserInputError()'], | 216 | ····['userinputerror_155',·['userinputerror',·['../classgmx_1_1UserInputError.xhtml#a07ae9dc1612508d54e18079cebdc4316',·1,·'gmx::UserInputError::UserInputError()'], |
217 | ········['../classgmx_1_1UserInputError.xhtml',·1,·'gmx::UserInputError'] | 217 | ········['../classgmx_1_1UserInputError.xhtml',·1,·'gmx::UserInputError'] |
218 | ····]], | 218 | ····]], |
219 | ····['userinputtest_156',·['UserInputTest',·['../classgmx_1_1test_1_1UserInputTest.xhtml',·1,·'gmx::test']]], | 219 | ····['userinputtest_156',·['UserInputTest',·['../classgmx_1_1test_1_1UserInputTest.xhtml',·1,·'gmx::test']]], |
220 | ····['usesimd_157',·['useSimd',·['../classgmx_1_1SettleData.xhtml#a6f48e1b037af7f441ccf2119bc5a3d21',·1,·'gmx::SettleData']]], | 220 | ····['usesimd_157',·['useSimd',·['../classgmx_1_1SettleData.xhtml#a6f48e1b037af7f441ccf2119bc5a3d21',·1,·'gmx::SettleData']]], |
221 | ····['usestringasmdpfile_158',·['usestringasmdpfile',·['../classgmx_1_1test_1_1SimulationRunner.xhtml#a75fa0a10a94033d78afcbbcb871df72d',·1,·'gmx::test::SimulationRunner::useStringAsMdpFile(const·char·*mdpString)'], | ||
222 | ····· | 221 | ····['usestringasmdpfile_158',·['usestringasmdpfile',·['../classgmx_1_1test_1_1SimulationRunner.xhtml#accfb15b5d82dd09daa6b25b2e0c14846',·1,·'gmx::test::SimulationRunner::useStringAsMdpFile(const·std::string·&mdpString)'], |
222 | ········['../classgmx_1_1test_1_1SimulationRunner.xhtml#a75fa0a10a94033d78afcbbcb871df72d',·1,·'gmx::test::SimulationRunner::useStringAsMdpFile(const·char·*mdpString)'] | ||
223 | ····]], | 223 | ····]], |
224 | ····['usestringasndxfile_159',·['useStringAsNdxFile',·['../classgmx_1_1test_1_1SimulationRunner.xhtml#a4af0a2fa669b9b49dbe8e31baa96ab8c',·1,·'gmx::test::SimulationRunner']]], | 224 | ····['usestringasndxfile_159',·['useStringAsNdxFile',·['../classgmx_1_1test_1_1SimulationRunner.xhtml#a4af0a2fa669b9b49dbe8e31baa96ab8c',·1,·'gmx::test::SimulationRunner']]], |
225 | ····['usetabulatedewaldcorr_160',·['useTabulatedEwaldCorr',·['../structNbnxm_1_1KernelBenchOptions.xhtml#a14fa358454fb18a2f9975cb463b9ffbd',·1,·'Nbnxm::KernelBenchOptions']]], | 225 | ····['usetabulatedewaldcorr_160',·['useTabulatedEwaldCorr',·['../structNbnxm_1_1KernelBenchOptions.xhtml#a14fa358454fb18a2f9975cb463b9ffbd',·1,·'Nbnxm::KernelBenchOptions']]], |
226 | ····['usetiming_161',·['useTiming',·['../structPmeGpuSpecific.xhtml#ad6bbbf827e5b002605a8de3625eb4e46',·1,·'PmeGpuSpecific']]], | 226 | ····['usetiming_161',·['useTiming',·['../structPmeGpuSpecific.xhtml#ad6bbbf827e5b002605a8de3625eb4e46',·1,·'PmeGpuSpecific']]], |
227 | ····['usetopg96andndxfromdatabase_162',·['useTopG96AndNdxFromDatabase',·['../classgmx_1_1test_1_1SimulationRunner.xhtml#acfd69f53927124bfdee2effd375fc9bd',·1,·'gmx::test::SimulationRunner']]], | 227 | ····['usetopg96andndxfromdatabase_162',·['useTopG96AndNdxFromDatabase',·['../classgmx_1_1test_1_1SimulationRunner.xhtml#acfd69f53927124bfdee2effd375fc9bd',·1,·'gmx::test::SimulationRunner']]], |
228 | ····['usetopgroandmdpfromfeptestdatabase_163',·['useTopGroAndMdpFromFepTestDatabase',·['../classgmx_1_1test_1_1SimulationRunner.xhtml#a5c4e09317af5dad88cde39c19402fed3',·1,·'gmx::test::SimulationRunner']]], | 228 | ····['usetopgroandmdpfromfeptestdatabase_163',·['useTopGroAndMdpFromFepTestDatabase',·['../classgmx_1_1test_1_1SimulationRunner.xhtml#a5c4e09317af5dad88cde39c19402fed3',·1,·'gmx::test::SimulationRunner']]], |
229 | ····['usetopgroandndxfromdatabase_164',·['useTopGroAndNdxFromDatabase',·['../classgmx_1_1test_1_1SimulationRunner.xhtml#aa46bb4573ffe549cc7f4ee67172d0594',·1,·'gmx::test::SimulationRunner']]], | 229 | ····['usetopgroandndxfromdatabase_164',·['useTopGroAndNdxFromDatabase',·['../classgmx_1_1test_1_1SimulationRunner.xhtml#aa46bb4573ffe549cc7f4ee67172d0594',·1,·'gmx::test::SimulationRunner']]], |
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244 | ····['utilities_2eh_179',·['utilities.h',·['../src_2gromacs_2listed__forces_2utilities_8h.xhtml',·1,·'(Global·Namespace)'], | 244 | ····['utilities_2eh_179',·['utilities.h',·['../src_2gromacs_2listed__forces_2utilities_8h.xhtml',·1,·'(Global·Namespace)'], |
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489 | ········['../classgmx_1_1AnalysisDataFrameHeader.xhtml#a8ea37d69d5624281274d3c7c2693d2ce',·1,·'gmx::AnalysisDataFrameHeader::AnalysisDataFrameHeader()'] | 489 | ········['../classgmx_1_1AnalysisDataFrameHeader.xhtml#a8ea37d69d5624281274d3c7c2693d2ce',·1,·'gmx::AnalysisDataFrameHeader::AnalysisDataFrameHeader()'] |
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504 | ········['../classgmx_1_1AnalysisDataFrameRef.xhtml#a61b34b109b209a406ece871172a35dad',·1,·'gmx::AnalysisDataFrameRef::AnalysisDataFrameRef(const·AnalysisDataFrameHeader·&header,·const·AnalysisDataValuesRef·&values,·const·AnalysisDataPointSetInfosRef·&pointSets)'], | ||
504 | ········['../classgmx_1_1AnalysisDataFrameRef.xhtml#ae66108d9c0c62be929140cdcd2a45bf6',·1,·'gmx::AnalysisDataFrameRef::AnalysisDataFrameRef(const·AnalysisDataFrameHeader·&header,·const·std::vector<·AnalysisDataValue·>·&values,·const·std::vector<·AnalysisDataPointSetInfo·>·&pointSets)'], | 505 | ········['../classgmx_1_1AnalysisDataFrameRef.xhtml#ae66108d9c0c62be929140cdcd2a45bf6',·1,·'gmx::AnalysisDataFrameRef::AnalysisDataFrameRef(const·AnalysisDataFrameHeader·&header,·const·std::vector<·AnalysisDataValue·>·&values,·const·std::vector<·AnalysisDataPointSetInfo·>·&pointSets)'], |
505 | ········['../classgmx_1_1AnalysisDataFrameRef.xhtml#a8f4388d83a1cc84f4451465ce9b7bfda',·1,·'gmx::AnalysisDataFrameRef::AnalysisDataFrameRef(const·AnalysisDataFrameRef·&frame,·int·firstColumn,·int·columnCount)'] | 506 | ········['../classgmx_1_1AnalysisDataFrameRef.xhtml#a8f4388d83a1cc84f4451465ce9b7bfda',·1,·'gmx::AnalysisDataFrameRef::AnalysisDataFrameRef(const·AnalysisDataFrameRef·&frame,·int·firstColumn,·int·columnCount)'] |
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533 | ········['../classgmx_1_1AnalysisDataPointSetRef.xhtml#a40431f0da6edf4c5eb94550b02301144',·1,·'gmx::AnalysisDataPointSetRef::AnalysisDataPointSetRef(const·AnalysisDataFrameHeader·&header,·const·std::vector<·AnalysisDataValue·>·&values)'], | 533 | ········['../classgmx_1_1AnalysisDataPointSetRef.xhtml#a40431f0da6edf4c5eb94550b02301144',·1,·'gmx::AnalysisDataPointSetRef::AnalysisDataPointSetRef(const·AnalysisDataFrameHeader·&header,·const·std::vector<·AnalysisDataValue·>·&values)'], |
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926 | ····['arrayrefwithpadding_2eh_560',·['arrayrefwithpadding.h',·['../arrayrefwithpadding_8h.xhtml',·1,·'']]], | 926 | ····['arrayrefwithpadding_2eh_560',·['arrayrefwithpadding.h',·['../arrayrefwithpadding_8h.xhtml',·1,·'']]], |
927 | ····['arrayrefwithpadding_3c_20gmx_3a_3abasicvector_20_3e_561',·['ArrayRefWithPadding<·gmx::BasicVector·>',·['../classgmx_1_1ArrayRefWithPadding.xhtml',·1,·'gmx']]], | 927 | ····['arrayrefwithpadding_3c_20gmx_3a_3abasicvector_20_3e_561',·['ArrayRefWithPadding<·gmx::BasicVector·>',·['../classgmx_1_1ArrayRefWithPadding.xhtml',·1,·'gmx']]], |
928 | ····['arraysize_2eh_562',·['arraysize.h',·['../arraysize_8h.xhtml',·1,·'']]], | 928 | ····['arraysize_2eh_562',·['arraysize.h',·['../arraysize_8h.xhtml',·1,·'']]], |
929 | ····['arraytype_563',·['arrayType',·['../structgmx_1_1anonymous__namespace_02gpu__3dfft__sycl__rocfft_8cpp_03_1_1PlanSetupData.xhtml#a7181910d3a2d84f933fc2af816565630',·1,·'gmx::anonymous_namespace{gpu_3dfft_sycl_rocfft.cpp}::PlanSetupData']]], | 929 | ····['arraytype_563',·['arrayType',·['../structgmx_1_1anonymous__namespace_02gpu__3dfft__sycl__rocfft_8cpp_03_1_1PlanSetupData.xhtml#a7181910d3a2d84f933fc2af816565630',·1,·'gmx::anonymous_namespace{gpu_3dfft_sycl_rocfft.cpp}::PlanSetupData']]], |
930 | ····['as_564',·['as',·['../structt__methoddata__same.xhtml#af3a9883e22ad8537171fccdf18e0d2b6',·1,·'t_methoddata_same']]], | 930 | ····['as_564',·['as',·['../structt__methoddata__same.xhtml#af3a9883e22ad8537171fccdf18e0d2b6',·1,·'t_methoddata_same']]], |
931 | ····['as_20a_20library_565',·['Using·GROMACS·as·a·library',·['../page_usinglibrary.xhtml',·1,·'index']]], | 931 | ····['as_20a_20library_565',·['Using·GROMACS·as·a·library',·['../page_usinglibrary.xhtml',·1,·'index']]], |
932 | ····['as_5fconst_566',·['as_const',·['../namespacegmx_1_1compat.xhtml#a59ff1adf811114dfb585be13017f6227',·1,·'gmx::compat']]], | 932 | ····['as_5fconst_566',·['as_const',·['../namespacegmx_1_1compat.xhtml#a59ff1adf811114dfb585be13017f6227',·1,·'gmx::compat']]], |
933 | ····['as_5fdvec_5farray_567',·['as_dvec_array',·['../namespacegmx.xhtml#ac635996b6d78ada40405ba91310641f7',·1,·'gmx::as_dvec_array(DVec·*x)'], | ||
934 | ····· | 933 | ····['as_5fdvec_5farray_567',·['as_dvec_array',·['../namespacegmx.xhtml#ab435e743af1b412558e429022580056b',·1,·'gmx::as_dvec_array(const·DVec·*x)'], |
934 | ········['../namespacegmx.xhtml#ac635996b6d78ada40405ba91310641f7',·1,·'gmx::as_dvec_array(DVec·*x)'] | ||
935 | ····]], | 935 | ····]], |
936 | ····['as_5fivec_5farray_568',·['as_ivec_array',·['../namespacegmx.xhtml#ab7d47f82fdb0dceddb28d228ecc926f2',·1,·'gmx::as_ivec_array(IVec·*x)'], | 936 | ····['as_5fivec_5farray_568',·['as_ivec_array',·['../namespacegmx.xhtml#ab7d47f82fdb0dceddb28d228ecc926f2',·1,·'gmx::as_ivec_array(IVec·*x)'], |
937 | ········['../namespacegmx.xhtml#a169687020d64e828f0120aa553c4240b',·1,·'gmx::as_ivec_array(const·IVec·*x)'] | 937 | ········['../namespacegmx.xhtml#a169687020d64e828f0120aa553c4240b',·1,·'gmx::as_ivec_array(const·IVec·*x)'] |
938 | ····]], | 938 | ····]], |
939 | ····['as_5frvec_5farray_569',·['as_rvec_array',·['../namespacegmx.xhtml#aede03a44c13df763bdd1d8d9d0887dda',·1,·'gmx::as_rvec_array(const·RVec·*x)'], | 939 | ····['as_5frvec_5farray_569',·['as_rvec_array',·['../namespacegmx.xhtml#aede03a44c13df763bdd1d8d9d0887dda',·1,·'gmx::as_rvec_array(const·RVec·*x)'], |
940 | ········['../namespacegmx.xhtml#ac36e90ef229d4fc88ba16409aef0b759',·1,·'gmx::as_rvec_array(RVec·*x)'] | 940 | ········['../namespacegmx.xhtml#ac36e90ef229d4fc88ba16409aef0b759',·1,·'gmx::as_rvec_array(RVec·*x)'] |
941 | ····]], | 941 | ····]], |
942 | ····['as_5fs_5fsorted_570',·['as_s_sorted',·['../structt__methoddata__same.xhtml#a8e60d150d29d86b285a3e90c249f6b8e',·1,·'t_methoddata_same']]], | 942 | ····['as_5fs_5fsorted_570',·['as_s_sorted',·['../structt__methoddata__same.xhtml#a8e60d150d29d86b285a3e90c249f6b8e',·1,·'t_methoddata_same']]], |
943 | ····['as_5fvec_571',·['as_vec',·['../classgmx_1_1BasicVector.xhtml#a5ed879b0c072cab9e58a9f4b1e346fae',·1,·'gmx::BasicVector::as_vec()'], | 943 | ····['as_5fvec_571',·['as_vec',·['../classgmx_1_1BasicVector.xhtml#a5ed879b0c072cab9e58a9f4b1e346fae',·1,·'gmx::BasicVector::as_vec()'], |
944 | ········['../classgmx_1_1BasicVector.xhtml#ac498c7a8e21aefa0ddfbffe6e8824242',·1,·'gmx::BasicVector::as_vec()·const'] | 944 | ········['../classgmx_1_1BasicVector.xhtml#ac498c7a8e21aefa0ddfbffe6e8824242',·1,·'gmx::BasicVector::as_vec()·const'] |
945 | ····]], | 945 | ····]], |
946 | ····['as_5fvec_5farray_572',·['as_vec_array',·['../namespacegmx.xhtml#adbccce10168efa3d28a2f7d3b644df37',·1,·'gmx::as_vec_array(BasicVector<·ValueType·>·*x)'], | ||
946 | ···· | 947 | ········['../namespacegmx.xhtml#af1a995d2d5d21983a662ab3e79e2b2e3',·1,·'gmx::as_vec_array(const·BasicVector<·ValueType·>·*x)'] |
947 | ········['../namespacegmx.xhtml#adbccce10168efa3d28a2f7d3b644df37',·1,·'gmx::as_vec_array(BasicVector<·ValueType·>·*x)'] | ||
948 | ····]], | 948 | ····]], |
949 | ····['asabsolute_573',·['asAbsolute',·['../classgmx_1_1test_1_1FloatingPointDifference.xhtml#a1256c4a2e308cddc83601e72d07ea9ff',·1,·'gmx::test::FloatingPointDifference']]], | 949 | ····['asabsolute_573',·['asAbsolute',·['../classgmx_1_1test_1_1FloatingPointDifference.xhtml#a1256c4a2e308cddc83601e72d07ea9ff',·1,·'gmx::test::FloatingPointDifference']]], |
950 | ····['asconstview_574',·['asConstView',·['../classgmx_1_1MultiDimArray.xhtml#a5dd95fca66f9da9723365d7bbe9df05a',·1,·'gmx::MultiDimArray']]], | 950 | ····['asconstview_574',·['asConstView',·['../classgmx_1_1MultiDimArray.xhtml#a5dd95fca66f9da9723365d7bbe9df05a',·1,·'gmx::MultiDimArray']]], |
951 | ····['asgenericfloat3pointer_575',·['asgenericfloat3pointer',·['../namespacegmx.xhtml#a | 951 | ····['asgenericfloat3pointer_575',·['asgenericfloat3pointer',·['../namespacegmx.xhtml#a7cf8c0c79ed50d630c676a108cff651e',·1,·'gmx::asGenericFloat3Pointer(T·*in)'], |
952 | ········['../namespacegmx.xhtml#a61d1fa4d0073e932d5ea53fd4ec968e9',·1,·'gmx::asGenericFloat3Pointer(C·&in)'], | ||
953 | ········['../namespacegmx.xhtml#a790f4239e154b040ddbcef4a1d3122ae',·1,·'gmx::asGenericFloat3Pointer(const·T·*in)'], | 952 | ········['../namespacegmx.xhtml#a790f4239e154b040ddbcef4a1d3122ae',·1,·'gmx::asGenericFloat3Pointer(const·T·*in)'], |
954 | ········['../namespacegmx.xhtml#a | 953 | ········['../namespacegmx.xhtml#a61d1fa4d0073e932d5ea53fd4ec968e9',·1,·'gmx::asGenericFloat3Pointer(C·&in)'], |
954 | ········['../namespacegmx.xhtml#a1b0b8846fcb8364fafd83a5592f12108',·1,·'gmx::asGenericFloat3Pointer(const·C·&in)'] | ||
955 | ····]], | 955 | ····]], |
956 | ····['asin_576',·['asin',·['../namespacegmx.xhtml#a3d5120df9c0bf437e64c806a7cfdad02',·1,·'gmx::asin(float·x)'], | ||
956 | ···· | 957 | ········['../namespacegmx.xhtml#ab02c7d47595f11074fbfedff40145544',·1,·'gmx::asin(double·x)'] |
957 | ········['../namespacegmx.xhtml#a3d5120df9c0bf437e64c806a7cfdad02',·1,·'gmx::asin(float·x)'] | ||
958 | ····]], | 958 | ····]], |
959 | ····['asinsingleaccuracy_577',·['asinSingleAccuracy',·['../namespacegmx.xhtml#a98465e562d7b1b24755bc693db04c8f5',·1,·'gmx']]], | 959 | ····['asinsingleaccuracy_577',·['asinSingleAccuracy',·['../namespacegmx.xhtml#a98465e562d7b1b24755bc693db04c8f5',·1,·'gmx']]], |
960 | ····['asize_578',·['asize',·['../group__module__utility.xhtml#ga2f549c8a29e4b43b862a96314a66a5fa',·1,·'arraysize.h']]], | 960 | ····['asize_578',·['asize',·['../group__module__utility.xhtml#ga2f549c8a29e4b43b862a96314a66a5fa',·1,·'arraysize.h']]], |
961 | ····['asparagraph_579',·['asParagraph',·['../classgmx_1_1LogEntryWriter.xhtml#ae57916f6fea855c4e7cd33e35a7cf17b',·1,·'gmx::LogEntryWriter']]], | 961 | ····['asparagraph_579',·['asParagraph',·['../classgmx_1_1LogEntryWriter.xhtml#ae57916f6fea855c4e7cd33e35a7cf17b',·1,·'gmx::LogEntryWriter']]], |
962 | ····['assert_5fdouble_5feq_5ftol_580',·['ASSERT_DOUBLE_EQ_TOL',·['../group__module__testutils.xhtml#ga010a2c949d35b7f815862bcbd6418ca0',·1,·'testasserts.h']]], | 962 | ····['assert_5fdouble_5feq_5ftol_580',·['ASSERT_DOUBLE_EQ_TOL',·['../group__module__testutils.xhtml#ga010a2c949d35b7f815862bcbd6418ca0',·1,·'testasserts.h']]], |
963 | ····['assert_5ffloat_5feq_5ftol_581',·['ASSERT_FLOAT_EQ_TOL',·['../group__module__testutils.xhtml#ga8ee3a0884221d08e838d4e4c46708153',·1,·'testasserts.h']]], | 963 | ····['assert_5ffloat_5feq_5ftol_581',·['ASSERT_FLOAT_EQ_TOL',·['../group__module__testutils.xhtml#ga8ee3a0884221d08e838d4e4c46708153',·1,·'testasserts.h']]], |
964 | ····['assert_5fno_5fthrow_5fgmx_582',·['ASSERT_NO_THROW_GMX',·['../group__module__testutils.xhtml#gafbd852cd87908495678c48118c02ee82',·1,·'testasserts.h']]], | 964 | ····['assert_5fno_5fthrow_5fgmx_582',·['ASSERT_NO_THROW_GMX',·['../group__module__testutils.xhtml#gafbd852cd87908495678c48118c02ee82',·1,·'testasserts.h']]], |
965 | ····['assert_5fplain_583',·['ASSERT_PLAIN',·['../group__module__testutils.xhtml#ga97a0194de1d98402f697adee0fe39a98',·1,·'testasserts.h']]], | 965 | ····['assert_5fplain_583',·['ASSERT_PLAIN',·['../group__module__testutils.xhtml#ga97a0194de1d98402f697adee0fe39a98',·1,·'testasserts.h']]], |
966 | ····['assert_5freal_5feq_584',·['ASSERT_REAL_EQ',·['../group__module__testutils.xhtml#gacb991b5a95254a4b350c2483fe115c0c',·1,·'testasserts.h']]], | 966 | ····['assert_5freal_5feq_584',·['ASSERT_REAL_EQ',·['../group__module__testutils.xhtml#gacb991b5a95254a4b350c2483fe115c0c',·1,·'testasserts.h']]], |
967 | ····['assert_5freal_5feq_5ftol_585',·['ASSERT_REAL_EQ_TOL',·['../group__module__testutils.xhtml#ga6e4937301d5b94f07bb4d9fd71030555',·1,·'testasserts.h']]], | 967 | ····['assert_5freal_5feq_5ftol_585',·['ASSERT_REAL_EQ_TOL',·['../group__module__testutils.xhtml#ga6e4937301d5b94f07bb4d9fd71030555',·1,·'testasserts.h']]], |
968 | ····['assert_5fthrow_5fgmx_586',·['ASSERT_THROW_GMX',·['../group__module__testutils.xhtml#ga5cd586713beef5aa3cf19b0ed2b3a269',·1,·'testasserts.h']]], | 968 | ····['assert_5fthrow_5fgmx_586',·['ASSERT_THROW_GMX',·['../group__module__testutils.xhtml#ga5cd586713beef5aa3cf19b0ed2b3a269',·1,·'testasserts.h']]], |
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61 | ····['baselatency_26',·['baseLatency',·['../structgmx_1_1HardwareTopology_1_1Numa.xhtml#ae5953a3434aa195be6ec0af0c98461d0',·1,·'gmx::HardwareTopology::Numa']]], | 61 | ····['baselatency_26',·['baseLatency',·['../structgmx_1_1HardwareTopology_1_1Numa.xhtml#ae5953a3434aa195be6ec0af0c98461d0',·1,·'gmx::HardwareTopology::Numa']]], |
62 | ····['basenetwork_2eh_27',·['basenetwork.h',·['../basenetwork_8h.xhtml',·1,·'']]], | 62 | ····['basenetwork_2eh_27',·['basenetwork.h',·['../basenetwork_8h.xhtml',·1,·'']]], |
63 | ····['baseversion_2eh_28',·['baseversion.h',·['../baseversion_8h.xhtml',·1,·'']]], | 63 | ····['baseversion_2eh_28',·['baseversion.h',·['../baseversion_8h.xhtml',·1,·'']]], |
64 | ····['baseversion_5fgen_2eh_29',·['baseversion_gen.h',·['../baseversion__gen_8h.xhtml',·1,·'']]], | 64 | ····['baseversion_5fgen_2eh_29',·['baseversion_gen.h',·['../baseversion__gen_8h.xhtml',·1,·'']]], |
65 | ····['basic_30',·['basic',·['../classgmx_1_1HardwareTopology.xhtml#aa94ffc2c936d76ba16f1938f449cfaa8a972e73b7a882d0802a4e3a16946a2f94',·1,·'gmx::HardwareTopology::Basic'], | 65 | ····['basic_30',·['basic',·['../classgmx_1_1HardwareTopology.xhtml#aa94ffc2c936d76ba16f1938f449cfaa8a972e73b7a882d0802a4e3a16946a2f94',·1,·'gmx::HardwareTopology::Basic'], |
66 | ········['../classgmx_1_1SelectionCollection_1_1Impl.xhtml#a2b56c1edc3a7dd352db9cf7bc94673d7a972e73b7a882d0802a4e3a16946a2f94',·1,·'gmx::SelectionCollection::Impl::Basic'] | 66 | ········['../classgmx_1_1SelectionCollection_1_1Impl.xhtml#a2b56c1edc3a7dd352db9cf7bc94673d7a972e73b7a882d0802a4e3a16946a2f94',·1,·'gmx::SelectionCollection::Impl::Basic'] |
67 | ····]], | 67 | ····]], |
68 | ····['basic_5fmdspan_31',·['basic_mdspan',·['../classgmx_1_1basic__mdspan.xhtml#a | 68 | ····['basic_5fmdspan_31',·['basic_mdspan',·['../classgmx_1_1basic__mdspan.xhtml#af91e1c5db6aa3eb085defcaf777c6fd3',·1,·'gmx::basic_mdspan::basic_mdspan(pointer·ptr,·IndexType...·DynamicExtents)·noexcept'], |
69 | ········['../classgmx_1_1basic__mdspan.xhtml#a7c22975cf4760a9f66be3e20d83e1e39',·1,·'gmx::basic_mdspan::basic_mdspan(pointer·ptr,·const·std::array<·ptrdiff_t,·extents_type::rank_dynamic()>·&dynamic_extents)'], | ||
70 | ········['../classgmx_1_1basic__mdspan.xhtml#ad98e5109d35223338f274e3bdd850622',·1,·'gmx::basic_mdspan::basic_mdspan(pointer·ptr,·const·mapping_type·&m)·noexcept'], | ||
71 | ········['../classgmx_1_1basic__mdspan.xhtml#a869a9eefe1ee5fdbe009f0970533b6c4',·1,·'gmx::basic_mdspan::basic_mdspan(pointer·ptr,·const·mapping_type·&m,·const·accessor_type·&a)·noexcept'], | ||
72 | ········['../classgmx_1_1basic__mdspan.xhtml#aaff0fad86e9316fd92ad9ed713522e62',·1,·'gmx::basic_mdspan::basic_mdspan(U·&&other)'], | ||
69 | ········['../classgmx_1_1basic__mdspan.xhtml#a96da2575cb94ba65feb904f78a2bb5eb',·1,·'gmx::basic_mdspan::basic_mdspan(const·U·&other)'], | 73 | ········['../classgmx_1_1basic__mdspan.xhtml#a96da2575cb94ba65feb904f78a2bb5eb',·1,·'gmx::basic_mdspan::basic_mdspan(const·U·&other)'], |
74 | ········['../classgmx_1_1basic__mdspan.xhtml#a1af35e8aadb8ddbe4a239879e3db6238',·1,·'gmx::basic_mdspan::basic_mdspan(const·basic_mdspan<·OtherElementType,·OtherExtents,·OtherLayoutPolicy,·OtherAccessor·>·&rhs)·noexcept'], | ||
70 | ········['../classgmx_1_1basic__mdspan.xhtml#a3fb425dfe9f5d47d8575a3a5ffe15356',·1,·'gmx::basic_mdspan::basic_mdspan(const·basic_mdspan·&other)·noexcept=default'], | 75 | ········['../classgmx_1_1basic__mdspan.xhtml#a3fb425dfe9f5d47d8575a3a5ffe15356',·1,·'gmx::basic_mdspan::basic_mdspan(const·basic_mdspan·&other)·noexcept=default'], |
76 | ········['../classgmx_1_1basic__mdspan.xhtml#aee5fbcbcd53cd39660f4a224aa28055b',·1,·'gmx::basic_mdspan::basic_mdspan(basic_mdspan·&&other)·noexcept=default'], | ||
71 | ········['../classgmx_1_1basic__mdspan.xhtml#aaff0fad86e9316fd92ad9ed713522e62',·1,·'gmx::basic_mdspan::basic_mdspan(U·&&other)'], | ||
72 | ········['../classgmx_1_1basic__mdspan.xhtml#a869a9eefe1ee5fdbe009f0970533b6c4',·1,·'gmx::basic_mdspan::basic_mdspan(pointer·ptr,·const·mapping_type·&m,·const·accessor_type·&a)·noexcept'], | ||
73 | ········['../classgmx_1_1basic__mdspan.xhtml#ad98e5109d35223338f274e3bdd850622',·1,·'gmx::basic_mdspan::basic_mdspan(pointer·ptr,·const·mapping_type·&m)·noexcept'], | ||
74 | ········['../classgmx_1_1basic__mdspan.xhtml#a7c22975cf4760a9f66be3e20d83e1e39',·1,·'gmx::basic_mdspan::basic_mdspan(pointer·ptr,·const·std::array<·ptrdiff_t,·extents_type::rank_dynamic()>·&dynamic_extents)'], | ||
75 | ········['../classgmx_1_1basic__mdspan.xhtml#a023bf1df41290714a1eb67ee9a952ef0',·1,·'gmx::basic_mdspan::basic_mdspan()·noexcept'], | 77 | ········['../classgmx_1_1basic__mdspan.xhtml#a023bf1df41290714a1eb67ee9a952ef0',·1,·'gmx::basic_mdspan::basic_mdspan()·noexcept'], |
76 | ········['../classgmx_1_1basic__mdspan.xhtml',·1,·'gmx::basic_mdspan<·ElementType,·Extents,·LayoutPolicy,·AccessorPolicy·>'] | 78 | ········['../classgmx_1_1basic__mdspan.xhtml',·1,·'gmx::basic_mdspan<·ElementType,·Extents,·LayoutPolicy,·AccessorPolicy·>'] |
77 | ········['../classgmx_1_1basic__mdspan.xhtml#a1af35e8aadb8ddbe4a239879e3db6238',·1,·'gmx::basic_mdspan::basic_mdspan(const·basic_mdspan<·OtherElementType,·OtherExtents,·OtherLayoutPolicy,·OtherAccessor·>·&rhs)·noexcept'], | ||
78 | ········['../classgmx_1_1basic__mdspan.xhtml#af91e1c5db6aa3eb085defcaf777c6fd3',·1,·'gmx::basic_mdspan::basic_mdspan(pointer·ptr,·IndexType...·DynamicExtents)·noexcept'] | ||
79 | ····]], | 79 | ····]], |
80 | ····['basic_5fmdspan_3c_20value_5ftype_2c_20dynamic_5fextents_5ftype_2c_20layout_5fright_20_3e_32',·['basic_mdspan<·value_type,·dynamic_extents_type,·layout_right·>',·['../classgmx_1_1basic__mdspan.xhtml',·1,·'gmx']]], | 80 | ····['basic_5fmdspan_3c_20value_5ftype_2c_20dynamic_5fextents_5ftype_2c_20layout_5fright_20_3e_32',·['basic_mdspan<·value_type,·dynamic_extents_type,·layout_right·>',·['../classgmx_1_1basic__mdspan.xhtml',·1,·'gmx']]], |
81 | ····['basic_5fmdspan_3c_20value_5ftype_2c_20extents_2c_20layout_5fright_20_3e_33',·['basic_mdspan<·value_type,·Extents,·layout_right·>',·['../classgmx_1_1basic__mdspan.xhtml',·1,·'gmx']]], | 81 | ····['basic_5fmdspan_3c_20value_5ftype_2c_20extents_2c_20layout_5fright_20_3e_33',·['basic_mdspan<·value_type,·Extents,·layout_right·>',·['../classgmx_1_1basic__mdspan.xhtml',·1,·'gmx']]], |
82 | ····['basic_5fmdspan_3c_20value_5ftype_2c_20gmx_3a_3aextents_2c_20layout_5fright_20_3e_34',·['basic_mdspan<·value_type,·gmx::extents,·layout_right·>',·['../classgmx_1_1basic__mdspan.xhtml',·1,·'gmx']]], | 82 | ····['basic_5fmdspan_3c_20value_5ftype_2c_20gmx_3a_3aextents_2c_20layout_5fright_20_3e_34',·['basic_mdspan<·value_type,·gmx::extents,·layout_right·>',·['../classgmx_1_1basic__mdspan.xhtml',·1,·'gmx']]], |
83 | ····['basic_5fmdspan_3c_20value_5ftype_2c_20gmx_3a_3aextents_3c_20dynamic_5fextent_2c_20dynamic_5fextent_20_3e_2c_20layout_5fright_20_3e_35',·['basic_mdspan<·value_type,·gmx::extents<·dynamic_extent,·dynamic_extent·>,·layout_right·>',·['../classgmx_1_1basic__mdspan.xhtml',·1,·'gmx']]], | 83 | ····['basic_5fmdspan_3c_20value_5ftype_2c_20gmx_3a_3aextents_3c_20dynamic_5fextent_2c_20dynamic_5fextent_20_3e_2c_20layout_5fright_20_3e_35',·['basic_mdspan<·value_type,·gmx::extents<·dynamic_extent,·dynamic_extent·>,·layout_right·>',·['../classgmx_1_1basic__mdspan.xhtml',·1,·'gmx']]], |
84 | ····['basic_5fmdspan_3c_20value_5ftype_2c_20static_5fextents_5ftype_2c_20layout_5fright_20_3e_36',·['basic_mdspan<·value_type,·static_extents_type,·layout_right·>',·['../classgmx_1_1basic__mdspan.xhtml',·1,·'gmx']]], | 84 | ····['basic_5fmdspan_3c_20value_5ftype_2c_20static_5fextents_5ftype_2c_20layout_5fright_20_3e_36',·['basic_mdspan<·value_type,·static_extents_type,·layout_right·>',·['../classgmx_1_1basic__mdspan.xhtml',·1,·'gmx']]], |
85 | ····['basicaveragehistogrammodule_37',·['basicaveragehistogrammodule',·['../classgmx_1_1internal_1_1BasicAverageHistogramModule.xhtml',·1,·'gmx::internal::BasicAverageHistogramModule'], | 85 | ····['basicaveragehistogrammodule_37',·['basicaveragehistogrammodule',·['../classgmx_1_1internal_1_1BasicAverageHistogramModule.xhtml',·1,·'gmx::internal::BasicAverageHistogramModule'], |
86 | ········['../classgmx_1_1internal_1_1BasicAverageHistogramModule.xhtml#a54f473e0e65a37bafd96e64187ff3737',·1,·'gmx::internal::BasicAverageHistogramModule::BasicAverageHistogramModule()'] | 86 | ········['../classgmx_1_1internal_1_1BasicAverageHistogramModule.xhtml#a54f473e0e65a37bafd96e64187ff3737',·1,·'gmx::internal::BasicAverageHistogramModule::BasicAverageHistogramModule()'] |
87 | ····]], | 87 | ····]], |
88 | ····['basicaveragehistogrammodulepointer_38',·['BasicAverageHistogramModulePointer',·['../classgmx_1_1internal_1_1BasicHistogramImpl.xhtml#a5339c7bb7559827e38bb63f8d824a276',·1,·'gmx::internal::BasicHistogramImpl']]], | 88 | ····['basicaveragehistogrammodulepointer_38',·['BasicAverageHistogramModulePointer',·['../classgmx_1_1internal_1_1BasicHistogramImpl.xhtml#a5339c7bb7559827e38bb63f8d824a276',·1,·'gmx::internal::BasicHistogramImpl']]], |
89 | ····['basichistogramimpl_39',·['basichistogramimpl',·['../classgmx_1_1internal_1_1BasicHistogramImpl.xhtml',·1,·'gmx::internal::BasicHistogramImpl'], | ||
90 | ····· | 89 | ····['basichistogramimpl_39',·['basichistogramimpl',·['../classgmx_1_1internal_1_1BasicHistogramImpl.xhtml#acd3fd16453a6ce448dc27f6be4d29c69',·1,·'gmx::internal::BasicHistogramImpl::BasicHistogramImpl()'], |
90 | ········['../classgmx_1_1internal_1_1BasicHistogramImpl.xhtml',·1,·'gmx::internal::BasicHistogramImpl'] | ||
91 | ····]], | 91 | ····]], |
92 | ····['basicmatrix3x3_40',·['BasicMatrix3x3',·['../namespacegmx.xhtml#a6ec53a17a29b3d233fdfbdc4e273d08d',·1,·'gmx']]], | 92 | ····['basicmatrix3x3_40',·['BasicMatrix3x3',·['../namespacegmx.xhtml#a6ec53a17a29b3d233fdfbdc4e273d08d',·1,·'gmx']]], |
93 | ····['basicoptions_2ecpp_41',·['basicoptions.cpp',·['../basicoptions_8cpp.xhtml',·1,·'']]], | 93 | ····['basicoptions_2ecpp_41',·['basicoptions.cpp',·['../basicoptions_8cpp.xhtml',·1,·'']]], |
94 | ····['basicoptions_2eh_42',·['basicoptions.h',·['../basicoptions_8h.xhtml',·1,·'']]], | 94 | ····['basicoptions_2eh_42',·['basicoptions.h',·['../basicoptions_8h.xhtml',·1,·'']]], |
95 | ····['basicoptionstorage_2eh_43',·['basicoptionstorage.h',·['../basicoptionstorage_8h.xhtml',·1,·'']]], | 95 | ····['basicoptionstorage_2eh_43',·['basicoptionstorage.h',·['../basicoptionstorage_8h.xhtml',·1,·'']]], |
96 | ····['basictest_44',·['basicTest',·['../classgmx_1_1test_1_1TrajectoryFrameWriterTest.xhtml#af60c02f3ca19494613898ebe603da1b0',·1,·'gmx::test::TrajectoryFrameWriterTest']]], | 96 | ····['basictest_44',·['basicTest',·['../classgmx_1_1test_1_1TrajectoryFrameWriterTest.xhtml#af60c02f3ca19494613898ebe603da1b0',·1,·'gmx::test::TrajectoryFrameWriterTest']]], |
97 | ····['basicvector_45',·['basicvector',·['../classgmx_1_1BasicVector.xhtml#a537d03f84068abce7af6b63290f8841e',·1,·'gmx::BasicVector::BasicVector(ValueType·x,·ValueType·y,·ValueType·z)'], | ||
98 | ········['../classgmx_1_1BasicVector.xhtml#a0770c51feab30c509deb6d9596222fb5',·1,·'gmx::BasicVector::BasicVector()'], | ||
99 | ····· | 97 | ····['basicvector_45',·['basicvector',·['../classgmx_1_1BasicVector.xhtml#a59c820c73b78d45df306861d89a875aa',·1,·'gmx::BasicVector::BasicVector(const·RawArray·x)'], |
100 | ········['../classgmx_1_1BasicVector.xhtml#a952f7b52f33c8d0fd75deda75cc5293a',·1,·'gmx::BasicVector::BasicVector(const·BasicVector·&src)=default'], | 98 | ········['../classgmx_1_1BasicVector.xhtml#a952f7b52f33c8d0fd75deda75cc5293a',·1,·'gmx::BasicVector::BasicVector(const·BasicVector·&src)=default'], |
101 | ········['../classgmx_1_1BasicVector.xhtml#a1d3608d65677e2aa992df4a2f209a7da',·1,·'gmx::BasicVector::BasicVector(BasicVector·&&src)·noexcept=default'], | 99 | ········['../classgmx_1_1BasicVector.xhtml#a1d3608d65677e2aa992df4a2f209a7da',·1,·'gmx::BasicVector::BasicVector(BasicVector·&&src)·noexcept=default'], |
102 | ········['../classgmx_1_1BasicVector.xhtml',·1,·'gmx::BasicVector<·ValueType·>'] | 100 | ········['../classgmx_1_1BasicVector.xhtml',·1,·'gmx::BasicVector<·ValueType·>'], |
101 | ········['../classgmx_1_1BasicVector.xhtml#a0770c51feab30c509deb6d9596222fb5',·1,·'gmx::BasicVector::BasicVector()'], | ||
102 | ········['../classgmx_1_1BasicVector.xhtml#a537d03f84068abce7af6b63290f8841e',·1,·'gmx::BasicVector::BasicVector(ValueType·x,·ValueType·y,·ValueType·z)'] | ||
103 | ····]], | 103 | ····]], |
104 | ····['basicvector_3c_20double_20_3e_46',·['BasicVector<·double·>',·['../classgmx_1_1BasicVector.xhtml',·1,·'gmx']]], | 104 | ····['basicvector_3c_20double_20_3e_46',·['BasicVector<·double·>',·['../classgmx_1_1BasicVector.xhtml',·1,·'gmx']]], |
105 | ····['basicvector_3c_20int_20_3e_47',·['BasicVector<·int·>',·['../classgmx_1_1BasicVector.xhtml',·1,·'gmx']]], | 105 | ····['basicvector_3c_20int_20_3e_47',·['BasicVector<·int·>',·['../classgmx_1_1BasicVector.xhtml',·1,·'gmx']]], |
106 | ····['basicvector_3c_20real_20_3e_48',·['BasicVector<·real·>',·['../classgmx_1_1BasicVector.xhtml',·1,·'gmx']]], | 106 | ····['basicvector_3c_20real_20_3e_48',·['BasicVector<·real·>',·['../classgmx_1_1BasicVector.xhtml',·1,·'gmx']]], |
107 | ····['bauto_49',·['bAuto',·['../structUmbrellaOptions.xhtml#a495f27b8e9cfb0ac6aa0c5a650eb54a6',·1,·'UmbrellaOptions']]], | 107 | ····['bauto_49',·['bAuto',·['../structUmbrellaOptions.xhtml#a495f27b8e9cfb0ac6aa0c5a650eb54a6',·1,·'UmbrellaOptions']]], |
108 | ····['bb_50',·['bb',·['../structNbnxnPairlistCpuWork_1_1IClusterData.xhtml#a8e4ed09c1eda9ba3122e66f2bd659032',·1,·'NbnxnPairlistCpuWork::IClusterData']]], | 108 | ····['bb_50',·['bb',·['../structNbnxnPairlistCpuWork_1_1IClusterData.xhtml#a8e4ed09c1eda9ba3122e66f2bd659032',·1,·'NbnxnPairlistCpuWork::IClusterData']]], |
109 | ····['bboolno_51',·['bBoolNo',·['../structgmx__sel__lexer__t.xhtml#a51c1565a9c7e67f715d28109b6a91489',·1,·'gmx_sel_lexer_t']]], | 109 | ····['bboolno_51',·['bBoolNo',·['../structgmx__sel__lexer__t.xhtml#a51c1565a9c7e67f715d28109b6a91489',·1,·'gmx_sel_lexer_t']]], |
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125 | ····['bdebugmode_67',·['bDebugMode',·['../fatalerror_8h.xhtml#aeceaa87707ac5c2c96e224de90dd481c',·1,·'fatalerror.cpp']]], | 125 | ····['bdebugmode_67',·['bDebugMode',·['../fatalerror_8h.xhtml#aeceaa87707ac5c2c96e224de90dd481c',·1,·'fatalerror.cpp']]], |
126 | ····['bdiscrete_68',·['bDiscrete',·['../structt__matrix.xhtml#a6ca5a8d5f5d4be235502f83ffac2586c',·1,·'t_matrix']]], | 126 | ····['bdiscrete_68',·['bDiscrete',·['../structt__matrix.xhtml#a6ca5a8d5f5d4be235502f83ffac2586c',·1,·'t_matrix']]], |
127 | ····['bdotime_69',·['bDoTime',·['../structNbnxmGpu.xhtml#a1de4ad8bb7a72156331022911da91fb3',·1,·'NbnxmGpu']]], | 127 | ····['bdotime_69',·['bDoTime',·['../structNbnxmGpu.xhtml#a1de4ad8bb7a72156331022911da91fb3',·1,·'NbnxmGpu']]], |
128 | ····['bdynamicbox_70',·['bDynamicBox',·['../structnbnxn__atomdata__t.xhtml#ae77b34a2c51cda08b6614469d056d29b',·1,·'nbnxn_atomdata_t']]], | 128 | ····['bdynamicbox_70',·['bDynamicBox',·['../structnbnxn__atomdata__t.xhtml#ae77b34a2c51cda08b6614469d056d29b',·1,·'nbnxn_atomdata_t']]], |
129 | ····['becool_71',·['beCool',·['../namespacegmx_1_1anonymous__namespace_02coolstuff_8cpp_03.xhtml#a67229d8062fb466b5be7cb8bed125f1a',·1,·'gmx::anonymous_namespace{coolstuff.cpp}']]], | 129 | ····['becool_71',·['beCool',·['../namespacegmx_1_1anonymous__namespace_02coolstuff_8cpp_03.xhtml#a67229d8062fb466b5be7cb8bed125f1a',·1,·'gmx::anonymous_namespace{coolstuff.cpp}']]], |
130 | ····['begin_72',·['begin',·['../classgmx_1_1Range.xhtml#a242b3517477cdd07a73a702f360f5b46',·1,·'gmx::Range::begin()'], | 130 | ····['begin_72',·['begin',·['../classgmx_1_1Range.xhtml#a242b3517477cdd07a73a702f360f5b46',·1,·'gmx::Range::begin()'], |
131 | ········['../namespacegmx.xhtml#a636719700df07fe8736fa19bb12c29dd',·1,·'gmx::begin(MultiDimArray<·TContainer,·Extents·>·&multiDimArray)'], | 131 | ········['../namespacegmx.xhtml#a636719700df07fe8736fa19bb12c29dd',·1,·'gmx::begin(MultiDimArray<·TContainer,·Extents·>·&multiDimArray)'], |
132 | ········['../namespacegmx.xhtml#a9fd99e24e163158545296b3f791b0ee8',·1,·'gmx::begin(const·BasicMdspan·&basicMdspan)'], | ||
133 | ········['../namespacegmx.xhtml#aaf0716c8ca857b1a8877fc94463b5850',·1,·'gmx::begin(const·MultiDimArray<·TContainer,·Extents·>·&multiDimArray)'], | 132 | ········['../namespacegmx.xhtml#aaf0716c8ca857b1a8877fc94463b5850',·1,·'gmx::begin(const·MultiDimArray<·TContainer,·Extents·>·&multiDimArray)'], |
133 | ········['../namespacegmx.xhtml#a9fd99e24e163158545296b3f791b0ee8',·1,·'gmx::begin(const·BasicMdspan·&basicMdspan)'], | ||
134 | ········['../classgmx_1_1FixedCapacityVector.xhtml#a453e4185086abe32f76359d79e5df439',·1,·'gmx::FixedCapacityVector::begin()'], | 134 | ········['../classgmx_1_1FixedCapacityVector.xhtml#a453e4185086abe32f76359d79e5df439',·1,·'gmx::FixedCapacityVector::begin()'], |
135 | ········['../structgmx_1_1EnumerationArray.xhtml#a4a2f5be2695dfa8cbac551742c15d771',·1,·'gmx::EnumerationArray::begin()'], | ||
136 | ········['../classgmx_1_1EnumerationWrapper.xhtml#abf496f9dcaab55be1b9cbe93f05312d9',·1,·'gmx::EnumerationWrapper::begin()'], | 135 | ········['../classgmx_1_1EnumerationWrapper.xhtml#abf496f9dcaab55be1b9cbe93f05312d9',·1,·'gmx::EnumerationWrapper::begin()'], |
137 | ········['../classgmx_1_1ArrayRef.xhtml#a52348f625a07e17a873cf943882510f9',·1,·'gmx::ArrayRef::begin()'], | 136 | ········['../classgmx_1_1ArrayRef.xhtml#a52348f625a07e17a873cf943882510f9',·1,·'gmx::ArrayRef::begin()'], |
137 | ········['../structgmx_1_1EnumerationArray.xhtml#a4a2f5be2695dfa8cbac551742c15d771',·1,·'gmx::EnumerationArray::begin()'], | ||
138 | ········['../classgmx_1_1EnergyTerm.xhtml#a4b930e14cacc91c16a0c6e59fb48ea58',·1,·'gmx::EnergyTerm::begin()'], | 138 | ········['../classgmx_1_1EnergyTerm.xhtml#a4b930e14cacc91c16a0c6e59fb48ea58',·1,·'gmx::EnergyTerm::begin()'], |
139 | ········['../classgmx_1_1IntegerBox.xhtml#a4bdda1928d7845c8e5c5c3ef2918a466',·1,·'gmx::IntegerBox::begin()'], | 139 | ········['../classgmx_1_1IntegerBox.xhtml#a4bdda1928d7845c8e5c5c3ef2918a466',·1,·'gmx::IntegerBox::begin()'], |
140 | ········['../classgmx_1_1internal_1_1SimdArrayRef.xhtml#ab4801001dba830e69c9984d97e9c4932',·1,·'gmx::internal::SimdArrayRef::begin()'], | 140 | ········['../classgmx_1_1internal_1_1SimdArrayRef.xhtml#ab4801001dba830e69c9984d97e9c4932',·1,·'gmx::internal::SimdArrayRef::begin()'], |
141 | ········['../classAtomRange.xhtml#afc17642be8cc592f6f47fdd9d86aa408',·1,·'AtomRange::begin()'], | 141 | ········['../classAtomRange.xhtml#afc17642be8cc592f6f47fdd9d86aa408',·1,·'AtomRange::begin()'], |
142 | ········['../classIListRange.xhtml#a7526befe10a07f17dbc35e704d01aeea',·1,·'IListRange::begin()'], | 142 | ········['../classIListRange.xhtml#a7526befe10a07f17dbc35e704d01aeea',·1,·'IListRange::begin()'], |
143 | ········['../classgmx_1_1EnergyFrame.xhtml#a8c6171058dd1a26721f4af8df12b7a10',·1,·'gmx::EnergyFrame::begin()'], | 143 | ········['../classgmx_1_1EnergyFrame.xhtml#a8c6171058dd1a26721f4af8df12b7a10',·1,·'gmx::EnergyFrame::begin()'], |
144 | ········['../classgmx_1_1FixedCapacityVector.xhtml#a93f0ea6236ab2cc8e924025646f8d87b',·1,·'gmx::FixedCapacityVector::begin()'] | 144 | ········['../classgmx_1_1FixedCapacityVector.xhtml#a93f0ea6236ab2cc8e924025646f8d87b',·1,·'gmx::FixedCapacityVector::begin()'] |
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152 | ····['bench_5fsetup_2ecpp_79',·['bench_setup.cpp',·['../bench__setup_8cpp.xhtml',·1,·'']]], | 152 | ····['bench_5fsetup_2ecpp_79',·['bench_setup.cpp',·['../bench__setup_8cpp.xhtml',·1,·'']]], |
153 | ····['bench_5fsetup_2eh_80',·['bench_setup.h',·['../bench__setup_8h.xhtml',·1,·'']]], | 153 | ····['bench_5fsetup_2eh_80',·['bench_setup.h',·['../bench__setup_8h.xhtml',·1,·'']]], |
154 | ····['bench_5fsystem_2ecpp_81',·['bench_system.cpp',·['../bench__system_8cpp.xhtml',·1,·'']]], | 154 | ····['bench_5fsystem_2ecpp_81',·['bench_system.cpp',·['../bench__system_8cpp.xhtml',·1,·'']]], |
155 | ····['bench_5fsystem_2eh_82',·['bench_system.h',·['../bench__system_8h.xhtml',·1,·'']]], | 155 | ····['bench_5fsystem_2eh_82',·['bench_system.h',·['../bench__system_8h.xhtml',·1,·'']]], |
156 | ····['benchmarkcombrule_83',·['BenchMarkCombRule',·['../namespaceNbnxm.xhtml#a2b0931ea4b2302d010810175754f8981',·1,·'Nbnxm']]], | 156 | ····['benchmarkcombrule_83',·['BenchMarkCombRule',·['../namespaceNbnxm.xhtml#a2b0931ea4b2302d010810175754f8981',·1,·'Nbnxm']]], |
157 | ····['benchmarkcoulomb_84',·['BenchMarkCoulomb',·['../namespaceNbnxm.xhtml#a30c80bf36a688c1633e86eb7e607792f',·1,·'Nbnxm']]], | 157 | ····['benchmarkcoulomb_84',·['BenchMarkCoulomb',·['../namespaceNbnxm.xhtml#a30c80bf36a688c1633e86eb7e607792f',·1,·'Nbnxm']]], |
158 | ····['benchmarkkernels_85',·['BenchMarkKernels',·['../namespaceNbnxm.xhtml#a6cd9801a8e78c975ed0ebe45c63b7715',·1,·'Nbnxm']]], | 158 | ····['benchmarkkernels_85',·['BenchMarkKernels',·['../namespaceNbnxm.xhtml#a6cd9801a8e78c975ed0ebe45c63b7715',·1,·'Nbnxm']]], |
159 | ····['benchmarksystem_86',·['benchmarksystem',·['../structgmx_1_1BenchmarkSystem.xhtml',·1,·'gmx::BenchmarkSystem'], | ||
160 | ····· | 159 | ····['benchmarksystem_86',·['benchmarksystem',·['../structgmx_1_1BenchmarkSystem.xhtml#a75dfe958cd7d70bdb5e90f2ec642a77b',·1,·'gmx::BenchmarkSystem::BenchmarkSystem()'], |
160 | ········['../structgmx_1_1BenchmarkSystem.xhtml',·1,·'gmx::BenchmarkSystem'] | ||
161 | ····]], | 161 | ····]], |
162 | ····['bend_87',·['Bend',·['../namespacegmx_1_1analysismodules_1_1anonymous__namespace_02dssp_8cpp_03.xhtml#a8ec2371446161e824ba0e6fb1edbba0cadcef3e264a0eecc2a9eadd4478c67a1f',·1,·'gmx::analysismodules::anonymous_namespace{dssp.cpp}']]], | 162 | ····['bend_87',·['Bend',·['../namespacegmx_1_1analysismodules_1_1anonymous__namespace_02dssp_8cpp_03.xhtml#a8ec2371446161e824ba0e6fb1edbba0cadcef3e264a0eecc2a9eadd4478c67a1f',·1,·'gmx::analysismodules::anonymous_namespace{dssp.cpp}']]], |
163 | ····['bequil_88',·['bEquil',·['../structdf__history__t.xhtml#a2800c69caa7fcce2c14cb537c4909bc3',·1,·'df_history_t']]], | 163 | ····['bequil_88',·['bEquil',·['../structdf__history__t.xhtml#a2800c69caa7fcce2c14cb537c4909bc3',·1,·'df_history_t']]], |
164 | ····['berendsentemperaturecoupling_89',·['BerendsenTemperatureCoupling',·['../classgmx_1_1BerendsenTemperatureCoupling.xhtml',·1,·'gmx']]], | 164 | ····['berendsentemperaturecoupling_89',·['BerendsenTemperatureCoupling',·['../classgmx_1_1BerendsenTemperatureCoupling.xhtml',·1,·'gmx']]], |
165 | ····['bestvertex_90',·['bestVertex',·['../classgmx_1_1NelderMeadSimplex.xhtml#a766a1b22213cf4e5a7a10ee4130afd6f',·1,·'gmx::NelderMeadSimplex']]], | 165 | ····['bestvertex_90',·['bestVertex',·['../classgmx_1_1NelderMeadSimplex.xhtml#a766a1b22213cf4e5a7a10ee4130afd6f',·1,·'gmx::NelderMeadSimplex']]], |
166 | ····['beta_91',·['beta',·['../structgmx_1_1DimParams_1_1FepDimParams.xhtml#ad3aa1edaec7f13643c5038ccc2a01a78',·1,·'gmx::DimParams::FepDimParams::beta'], | 166 | ····['beta_91',·['beta',·['../structgmx_1_1DimParams_1_1FepDimParams.xhtml#ad3aa1edaec7f13643c5038ccc2a01a78',·1,·'gmx::DimParams::FepDimParams::beta'], |
167 | ········['../structgmx_1_1test_1_1AwhTestParameters.xhtml#a3f4c1a9b2610aa00392d66d2c4b183ea',·1,·'gmx::test::AwhTestParameters::beta'] | 167 | ········['../structgmx_1_1test_1_1AwhTestParameters.xhtml#a3f4c1a9b2610aa00392d66d2c4b183ea',·1,·'gmx::test::AwhTestParameters::beta'] |
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180 | ····['bgeneratehh14interactions_103',·['bGenerateHH14Interactions',·['../structPreprocessResidue.xhtml#a7ef40e3704969bcd360c3d5d94ee264b',·1,·'PreprocessResidue']]], | 180 | ····['bgeneratehh14interactions_103',·['bGenerateHH14Interactions',·['../structPreprocessResidue.xhtml#a7ef40e3704969bcd360c3d5d94ee264b',·1,·'PreprocessResidue']]], |
181 | ····['bgroups_104',·['bGroups',·['../structgmx__sel__lexer__t.xhtml#a5bf6b14ef14775f440cd6a150acf22b0',·1,·'gmx_sel_lexer_t']]], | 181 | ····['bgroups_104',·['bGroups',·['../structgmx__sel__lexer__t.xhtml#a5bf6b14ef14775f440cd6a150acf22b0',·1,·'gmx_sel_lexer_t']]], |
182 | ····['bharmonic_105',·['bHarmonic',·['../structanonymous__namespace_02edsam_8cpp_03_1_1t__edflood.xhtml#ad3c168d4052e3bc5a77dea8ff3a877fe',·1,·'anonymous_namespace{edsam.cpp}::t_edflood']]], | 182 | ····['bharmonic_105',·['bHarmonic',·['../structanonymous__namespace_02edsam_8cpp_03_1_1t__edflood.xhtml#ad3c168d4052e3bc5a77dea8ff3a877fe',·1,·'anonymous_namespace{edsam.cpp}::t_edflood']]], |
183 | ····['bhelix_106',·['bHelix',·['../structt__bb.xhtml#a48c50f40d59ad266202feb100567d843',·1,·'t_bb']]], | 183 | ····['bhelix_106',·['bHelix',·['../structt__bb.xhtml#a48c50f40d59ad266202feb100567d843',·1,·'t_bb']]], |
184 | ····['bhidden_5f_107',·['bHidden_',·['../classgmx_1_1CommandLineHelpContext_1_1Impl.xhtml#a1a012091fc0390f509fcc3c55bd97092',·1,·'gmx::CommandLineHelpContext::Impl']]], | 184 | ····['bhidden_5f_107',·['bHidden_',·['../classgmx_1_1CommandLineHelpContext_1_1Impl.xhtml#a1a012091fc0390f509fcc3c55bd97092',·1,·'gmx::CommandLineHelpContext::Impl']]], |
185 | ····['bhistonly_108',·['bHistOnly',·['../structUmbrellaOptions.xhtml#acdf67a7adadf17543b0433c028aa387a',·1,·'UmbrellaOptions']]], | 185 | ····['bhistonly_108',·['bHistOnly',·['../structUmbrellaOptions.xhtml#acdf67a7adadf17543b0433c028aa387a',·1,·'UmbrellaOptions']]], |
186 | ····['bhost_5funused_109',·['bhost_UNUSED',·['../structCheckpointHeaderContents.xhtml#aef8c2b80e340df183cde5c1946fc64e5',·1,·'CheckpointHeaderContents']]], | 186 | ····['bhost_5funused_109',·['bhost_UNUSED',·['../structCheckpointHeaderContents.xhtml#aef8c2b80e340df183cde5c1946fc64e5',·1,·'CheckpointHeaderContents']]], |
187 | ····['bias_110',·['bias',·['../classgmx_1_1Bias.xhtml',·1,·'gmx::Bias'], | ||
187 | ···· | 188 | ········['../namespacegmx.xhtml#aed0429233bc357e419dafee7b8bd1344a4ad6b9e6418fd2d739906bd47e887ae3',·1,·'gmx::Bias'], |
188 | ········['../classgmx_1_1PointState.xhtml#a051fc887a154fd8e8429f772006ff597',·1,·'gmx::PointState::bias()'], | 189 | ········['../classgmx_1_1PointState.xhtml#a051fc887a154fd8e8429f772006ff597',·1,·'gmx::PointState::bias()'], |
189 | ········['../classgmx_1_1Bias.xhtml#a6ea05d388c5983d92b1e4f9216ec3c07',·1,·'gmx::Bias::Bias()'] | 190 | ········['../classgmx_1_1Bias.xhtml#a6ea05d388c5983d92b1e4f9216ec3c07',·1,·'gmx::Bias::Bias()'] |
190 | ········['../classgmx_1_1Bias.xhtml',·1,·'gmx::Bias'] | ||
191 | ····]], | 191 | ····]], |
192 | ····['bias_2ecpp_111',·['bias.cpp',·['../bias_8cpp.xhtml',·1,·'']]], | 192 | ····['bias_2ecpp_111',·['bias.cpp',·['../bias_8cpp.xhtml',·1,·'']]], |
193 | ····['bias_2eh_112',·['bias.h',·['../bias_8h.xhtml',·1,·'']]], | 193 | ····['bias_2eh_112',·['bias.h',·['../bias_8h.xhtml',·1,·'']]], |
194 | ····['bias_5f_113',·['bias_',·['../structgmx_1_1BiasCoupledToSystem.xhtml#a915eb82b66d861dd5377036383b654f0',·1,·'gmx::BiasCoupledToSystem::bias_'], | 194 | ····['bias_5f_113',·['bias_',·['../structgmx_1_1BiasCoupledToSystem.xhtml#a915eb82b66d861dd5377036383b654f0',·1,·'gmx::BiasCoupledToSystem::bias_'], |
195 | ········['../classgmx_1_1test_1_1BiasTest.xhtml#af4806c866b09dce06db386eb0dcea407',·1,·'gmx::test::BiasTest::bias_'], | ||
195 | ········['../classgmx_1_1test_1_1BiasFepLambdaStateTest.xhtml#ae7e39eda7a77d998b80c658f65fb9074',·1,·'gmx::test::BiasFepLambdaStateTest::bias_'] | 196 | ········['../classgmx_1_1test_1_1BiasFepLambdaStateTest.xhtml#ae7e39eda7a77d998b80c658f65fb9074',·1,·'gmx::test::BiasFepLambdaStateTest::bias_'] |
196 | ········['../classgmx_1_1test_1_1BiasTest.xhtml#af4806c866b09dce06db386eb0dcea407',·1,·'gmx::test::BiasTest::bias_'] | ||
197 | ····]], | 197 | ····]], |
198 | ····['biascorrectedaverage_114',·['biasCorrectedAverage',·['../classgmx_1_1ExponentialMovingAverage.xhtml#a83f79db8f50129497cc5349b972ecabb',·1,·'gmx::ExponentialMovingAverage']]], | 198 | ····['biascorrectedaverage_114',·['biasCorrectedAverage',·['../classgmx_1_1ExponentialMovingAverage.xhtml#a83f79db8f50129497cc5349b972ecabb',·1,·'gmx::ExponentialMovingAverage']]], |
199 | ····['biascoupledtosystem_115',·['biascoupledtosystem',·['../structgmx_1_1BiasCoupledToSystem.xhtml',·1,·'gmx::BiasCoupledToSystem'], | ||
199 | ···· | 200 | ········['../structgmx_1_1BiasCoupledToSystem.xhtml#a0d55bb29484a8c71778a4bf70a3ddfd0',·1,·'gmx::BiasCoupledToSystem::BiasCoupledToSystem()'] |
200 | ········['../structgmx_1_1BiasCoupledToSystem.xhtml',·1,·'gmx::BiasCoupledToSystem'] | ||
201 | ····]], | 201 | ····]], |
202 | ····['biasedlogweightfrompoint_116',·['biasedLogWeightFromPoint',·['../namespacegmx_1_1anonymous__namespace_02biasstate_8cpp_03.xhtml#a154728ee54b770144eeaee8650142f3f',·1,·'gmx::anonymous_namespace{biasstate.cpp}']]], | 202 | ····['biasedlogweightfrompoint_116',·['biasedLogWeightFromPoint',·['../namespacegmx_1_1anonymous__namespace_02biasstate_8cpp_03.xhtml#a154728ee54b770144eeaee8650142f3f',·1,·'gmx::anonymous_namespace{biasstate.cpp}']]], |
203 | ····['biasesarecompatibleforsharingbetweensimulations_117',·['biasesAreCompatibleForSharingBetweenSimulations',·['../namespacegmx.xhtml#a161ff1b8f4e89a7136264bf0130c8627',·1,·'gmx']]], | 203 | ····['biasesarecompatibleforsharingbetweensimulations_117',·['biasesAreCompatibleForSharingBetweenSimulations',·['../namespacegmx.xhtml#a161ff1b8f4e89a7136264bf0130c8627',·1,·'gmx']]], |
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144 | ····['c_5fnbnxngpurollinglistpruninginterval_112',·['c_nbnxnGpuRollingListPruningInterval',·['../pairlist__tuning_8cpp.xhtml#a34b35efd3187a63732fc903620d3d0c9',·1,·'pairlist_tuning.cpp']]], | 144 | ····['c_5fnbnxngpurollinglistpruninginterval_112',·['c_nbnxnGpuRollingListPruningInterval',·['../pairlist__tuning_8cpp.xhtml#a34b35efd3187a63732fc903620d3d0c9',·1,·'pairlist_tuning.cpp']]], |
145 | ····['c_5fnbnxnlistsizefactorcpu_113',·['c_nbnxnListSizeFactorCpu',·['../pairlist__tuning_8cpp.xhtml#a3fcbb19cb6689beec04d844cc6c2feb8',·1,·'pairlist_tuning.cpp']]], | 145 | ····['c_5fnbnxnlistsizefactorcpu_113',·['c_nbnxnListSizeFactorCpu',·['../pairlist__tuning_8cpp.xhtml#a3fcbb19cb6689beec04d844cc6c2feb8',·1,·'pairlist_tuning.cpp']]], |
146 | ····['c_5fnbnxnlistsizefactorgpu_114',·['c_nbnxnListSizeFactorGPU',·['../pairlist__tuning_8cpp.xhtml#a327a8f12f5167b1f5fedbdcf60410b8a',·1,·'pairlist_tuning.cpp']]], | 146 | ····['c_5fnbnxnlistsizefactorgpu_114',·['c_nbnxnListSizeFactorGPU',·['../pairlist__tuning_8cpp.xhtml#a327a8f12f5167b1f5fedbdcf60410b8a',·1,·'pairlist_tuning.cpp']]], |
147 | ····['c_5fnbnxnlistsizefactorintelxeonphi_115',·['c_nbnxnListSizeFactorIntelXeonPhi',·['../pairlist__tuning_8cpp.xhtml#aae87045b170c054f573dcc97066eeecd',·1,·'pairlist_tuning.cpp']]], | 147 | ····['c_5fnbnxnlistsizefactorintelxeonphi_115',·['c_nbnxnListSizeFactorIntelXeonPhi',·['../pairlist__tuning_8cpp.xhtml#aae87045b170c054f573dcc97066eeecd',·1,·'pairlist_tuning.cpp']]], |
148 | ····['c_5fnbnxnlistsizefactormargin_116',·['c_nbnxnListSizeFactorMargin',·['../pairlist__tuning_8cpp.xhtml#a21bf1f047a789ad132b04ba504dd08bf',·1,·'pairlist_tuning.cpp']]], | 148 | ····['c_5fnbnxnlistsizefactormargin_116',·['c_nbnxnListSizeFactorMargin',·['../pairlist__tuning_8cpp.xhtml#a21bf1f047a789ad132b04ba504dd08bf',·1,·'pairlist_tuning.cpp']]], |
149 | ····['c_5fnmtomrcunits_117',·['c_nmToMrcUnits',·['../namespacegmx_1_1anonymous__namespace_02mrcserializer_8cpp_03.xhtml#a084c836f7f75cc97b5c92d3fa400dc70',·1,·'gmx::anonymous_namespace{mrcserializer.cpp}']]], | 149 | ····['c_5fnmtomrcunits_117',·['c_nmToMrcUnits',·['../namespacegmx_1_1anonymous__namespace_02mrcserializer_8cpp_03.xhtml#a084c836f7f75cc97b5c92d3fa400dc70',·1,·'gmx::anonymous_namespace{mrcserializer.cpp}']]], |
150 | ····['c_5fnormalizationnames_118',·['c_normalizationNames',·['../group__module__trajectoryanalysis.xhtml#gafe9e3ae6c83f2aeb21e0ad8841e3b0e2',·1,·'gmx::analysismodules::anonymous_namespace{rdf.cpp}']]], | 150 | ····['c_5fnormalizationnames_118',·['c_normalizationNames',·['../group__module__trajectoryanalysis.xhtml#gafe9e3ae6c83f2aeb21e0ad8841e3b0e2',·1,·'gmx::analysismodules::anonymous_namespace{rdf.cpp}']]], |
151 | ····['c_5fnumatoms_119',·['c_numatoms',·['../namespacegmx_1_1anonymous__namespace_02 | 151 | ····['c_5fnumatoms_119',·['c_numatoms',·['../namespacegmx_1_1test_1_1anonymous__namespace_02pairs_8cpp_03.xhtml#ab0d16511710d3d446c4ebe139a1a93d8',·1,·'gmx::test::anonymous_namespace{pairs.cpp}::c_numAtoms'], |
152 | ········['../namespacegmx_1_1test_1_1anonymous__namespace_02nb__free__energy_8cpp_03.xhtml#a9e6451d690e56d5db0395022cefa888c',·1,·'gmx::test::anonymous_namespace{nb_free_energy.cpp}::c_numAtoms'], | 152 | ········['../namespacegmx_1_1test_1_1anonymous__namespace_02nb__free__energy_8cpp_03.xhtml#a9e6451d690e56d5db0395022cefa888c',·1,·'gmx::test::anonymous_namespace{nb_free_energy.cpp}::c_numAtoms'], |
153 | ········['../namespacegmx_1_1test_1_1anonymous__namespace_02bonded_8cpp_03.xhtml#a60f4b0f65ad59fda745897b8764dae0a',·1,·'gmx::test::anonymous_namespace{bonded.cpp}::c_numAtoms'], | 153 | ········['../namespacegmx_1_1test_1_1anonymous__namespace_02bonded_8cpp_03.xhtml#a60f4b0f65ad59fda745897b8764dae0a',·1,·'gmx::test::anonymous_namespace{bonded.cpp}::c_numAtoms'], |
154 | ········['../namespacegmx_1_1 | 154 | ········['../namespacegmx_1_1anonymous__namespace_02wholemoleculetransform_8cpp_03.xhtml#aefe3a2139c12a370bfa601c498f7c317',·1,·'gmx::anonymous_namespace{wholemoleculetransform.cpp}::c_numAtoms'] |
155 | ····]], | 155 | ····]], |
156 | ····['c_5fnumbonds_120',·['c_numBonds',·['../namespacegmx_1_1anonymous__namespace_02wholemoleculetransform_8cpp_03.xhtml#af7fcad6d0b020573ed9b50fc59a72ecd',·1,·'gmx::anonymous_namespace{wholemoleculetransform.cpp}']]], | 156 | ····['c_5fnumbonds_120',·['c_numBonds',·['../namespacegmx_1_1anonymous__namespace_02wholemoleculetransform_8cpp_03.xhtml#af7fcad6d0b020573ed9b50fc59a72ecd',·1,·'gmx::anonymous_namespace{wholemoleculetransform.cpp}']]], |
157 | ····['c_5fnumboundingboxbounds1d_121',·['c_numBoundingBoxBounds1D',·['../namespaceNbnxm.xhtml#a1eba0f67a1d9680949c080c762e879a5',·1,·'Nbnxm']]], | 157 | ····['c_5fnumboundingboxbounds1d_121',·['c_numBoundingBoxBounds1D',·['../namespaceNbnxm.xhtml#a1eba0f67a1d9680949c080c762e879a5',·1,·'Nbnxm']]], |
158 | ····['c_5fnumcorrelationblocks_122',·['c_numCorrelationBlocks',·['../classgmx_1_1CorrelationTensor.xhtml#a3bacb906f9931328bddd22c8e218c9d4',·1,·'gmx::CorrelationTensor']]], | 158 | ····['c_5fnumcorrelationblocks_122',·['c_numCorrelationBlocks',·['../classgmx_1_1CorrelationTensor.xhtml#a3bacb906f9931328bddd22c8e218c9d4',·1,·'gmx::CorrelationTensor']]], |
159 | ····['c_5fnumeigenrealsperexperiment_123',·['c_numEigenRealsPerExperiment',·['../structt__oriresdata.xhtml#a19c8ceb03fed76dc54909c852ea83321',·1,·'t_oriresdata']]], | 159 | ····['c_5fnumeigenrealsperexperiment_123',·['c_numEigenRealsPerExperiment',·['../structt__oriresdata.xhtml#a19c8ceb03fed76dc54909c852ea83321',·1,·'t_oriresdata']]], |
160 | ····['c_5fnumelectypes_124',·['c_numElecTypes',·['../namespaceNbnxm.xhtml#a6db90ea2cf677b2766d056d777a07088',·1,·'Nbnxm']]], | 160 | ····['c_5fnumelectypes_124',·['c_numElecTypes',·['../namespaceNbnxm.xhtml#a6db90ea2cf677b2766d056d777a07088',·1,·'Nbnxm']]], |
161 | ····['c_5fnumfirsttuningintervalskip_125',·['c_numFirstTuningIntervalSkip',·['../pme__load__balancing_8cpp.xhtml#a358540e661dc9efd36da10c2989d397a',·1,·'pme_load_balancing.cpp']]], | 161 | ····['c_5fnumfirsttuningintervalskip_125',·['c_numFirstTuningIntervalSkip',·['../pme__load__balancing_8cpp.xhtml#a358540e661dc9efd36da10c2989d397a',·1,·'pme_load_balancing.cpp']]], |
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165 | ····['c_5fnumpostswitchtuningintervalskip_129',·['c_numPostSwitchTuningIntervalSkip',·['../pme__load__balancing_8cpp.xhtml#a6bd07f15551b49e8775cdaba44a1d7de',·1,·'pme_load_balancing.cpp']]], | 165 | ····['c_5fnumpostswitchtuningintervalskip_129',·['c_numPostSwitchTuningIntervalSkip',·['../pme__load__balancing_8cpp.xhtml#a6bd07f15551b49e8775cdaba44a1d7de',·1,·'pme_load_balancing.cpp']]], |
166 | ····['c_5fnumvdwtypes_130',·['c_numVdwTypes',·['../namespaceNbnxm.xhtml#a06589b55845ca1245b0e50cac7ad86c9',·1,·'Nbnxm']]], | 166 | ····['c_5fnumvdwtypes_130',·['c_numVdwTypes',·['../namespaceNbnxm.xhtml#a06589b55845ca1245b0e50cac7ad86c9',·1,·'Nbnxm']]], |
167 | ····['c_5foldestsupportedmagicnumber_131',·['c_oldestSupportedMagicNumber',·['../namespaceanonymous__namespace_02edsam_8cpp_03.xhtml#afb8f8255516cbf4c08e51ee7cface65b',·1,·'anonymous_namespace{edsam.cpp}']]], | 167 | ····['c_5foldestsupportedmagicnumber_131',·['c_oldestSupportedMagicNumber',·['../namespaceanonymous__namespace_02edsam_8cpp_03.xhtml#afb8f8255516cbf4c08e51ee7cface65b',·1,·'anonymous_namespace{edsam.cpp}']]], |
168 | ····['c_5foldestunsupportedmagicnumber_132',·['c_oldestUnsupportedMagicNumber',·['../namespaceanonymous__namespace_02edsam_8cpp_03.xhtml#a3d1dc11b4252282579382b89abd9d815',·1,·'anonymous_namespace{edsam.cpp}']]], | 168 | ····['c_5foldestunsupportedmagicnumber_132',·['c_oldestUnsupportedMagicNumber',·['../namespaceanonymous__namespace_02edsam_8cpp_03.xhtml#a3d1dc11b4252282579382b89abd9d815',·1,·'anonymous_namespace{edsam.cpp}']]], |
169 | ····['c_5foptions_133',·['c_options',·['../namespacegmx_1_1test_1_1anonymous__namespace_02parrinellorahman_8cpp_03.xhtml#a1555a48dc2e0847fe505724fda04fc66',·1,·'gmx::test::anonymous_namespace{parrinellorahman.cpp}']]], | 169 | ····['c_5foptions_133',·['c_options',·['../namespacegmx_1_1test_1_1anonymous__namespace_02parrinellorahman_8cpp_03.xhtml#a1555a48dc2e0847fe505724fda04fc66',·1,·'gmx::test::anonymous_namespace{parrinellorahman.cpp}']]], |
170 | ····['c_5fpackx4_134',·['c_packX4',·['../atomdata_8h.xhtml#a5edaa1830e4412dd0d817e50585589a7',·1,·'atomdata.h']]], | 170 | ····['c_5fpackx4_134',·['c_packX4',·['../atomdata_8h.xhtml#a5edaa1830e4412dd0d817e50585589a7',·1,·'atomdata.h']]], |
171 | ····['c_5fpackx8_135',·['c_packX8',·['../atomdata_8h.xhtml#a5b81bb507cc1c9ef5b09fb99ee45eff0',·1,·'atomdata.h']]], | 171 | ····['c_5fpackx8_135',·['c_packX8',·['../atomdata_8h.xhtml#a5b81bb507cc1c9ef5b09fb99ee45eff0',·1,·'atomdata.h']]], |
172 | ····['c_5fpbcfortests_136',·['c_pbcfortests',·['../namespacegmx_1_1test_1_1anonymous__namespace_02pairs_8cpp_03.xhtml#a4e60b5e4d9d4e96d420da062cdd7136f',·1,·'gmx::test::anonymous_namespace{pairs.cpp}::c_pbcForTests'], | ||
173 | ····· | 172 | ····['c_5fpbcfortests_136',·['c_pbcfortests',·['../namespacegmx_1_1test_1_1anonymous__namespace_02position__restraints_8cpp_03.xhtml#a3f98f7220875de5238f25cb8ef1a380e',·1,·'gmx::test::anonymous_namespace{position_restraints.cpp}::c_pbcForTests'], |
173 | ········['../namespacegmx_1_1test_1_1anonymous__namespace_02pairs_8cpp_03.xhtml#a4e60b5e4d9d4e96d420da062cdd7136f',·1,·'gmx::test::anonymous_namespace{pairs.cpp}::c_pbcForTests'], | ||
174 | ········['../namespacegmx_1_1test_1_1anonymous__namespace_02bonded_8cpp_03.xhtml#a8716925dfcab1e34ee190aa91b188f0a',·1,·'gmx::test::anonymous_namespace{bonded.cpp}::c_pbcForTests'] | 174 | ········['../namespacegmx_1_1test_1_1anonymous__namespace_02bonded_8cpp_03.xhtml#a8716925dfcab1e34ee190aa91b188f0a',·1,·'gmx::test::anonymous_namespace{bonded.cpp}::c_pbcForTests'] |
175 | ····]], | 175 | ····]], |
176 | ····['c_5fpbctypenames_137',·['c_pbcTypeNames',·['../pbc_8cpp.xhtml#a7be910db7d0fa30ca5568f9cbc332ee9',·1,·'pbc.cpp']]], | 176 | ····['c_5fpbctypenames_137',·['c_pbcTypeNames',·['../pbc_8cpp.xhtml#a7be910db7d0fa30ca5568f9cbc332ee9',·1,·'pbc.cpp']]], |
177 | ····['c_5fpdbatomstypenames_138',·['c_pdbAtomsTypeNames',·['../namespacegmx_1_1analysismodules_1_1anonymous__namespace_02select_8cpp_03.xhtml#a04755ce557be547fa02a3bd3486e70f5',·1,·'gmx::analysismodules::anonymous_namespace{select.cpp}']]], | 177 | ····['c_5fpdbatomstypenames_138',·['c_pdbAtomsTypeNames',·['../namespacegmx_1_1analysismodules_1_1anonymous__namespace_02select_8cpp_03.xhtml#a04755ce557be547fa02a3bd3486e70f5',·1,·'gmx::analysismodules::anonymous_namespace{select.cpp}']]], |
178 | ····['c_5fpmeatomdatablocksize_139',·['c_pmeAtomDataBlockSize',·['../pme__gpu__internal_8cpp.xhtml#a9751dab48d98743b36ad4d6eee89aab6',·1,·'pme_gpu_internal.cpp']]], | 178 | ····['c_5fpmeatomdatablocksize_139',·['c_pmeAtomDataBlockSize',·['../pme__gpu__internal_8cpp.xhtml#a9751dab48d98743b36ad4d6eee89aab6',·1,·'pme_gpu_internal.cpp']]], |
179 | ····['c_5fpmegpuorder_140',·['c_pmeGpuOrder',·['../pme__gpu__constants_8h.xhtml#a8027cdc3ec057297fa567378562d892e',·1,·'pme_gpu_constants.h']]], | 179 | ····['c_5fpmegpuorder_140',·['c_pmeGpuOrder',·['../pme__gpu__constants_8h.xhtml#a8027cdc3ec057297fa567378562d892e',·1,·'pme_gpu_constants.h']]], |
180 | ····['c_5fppstretchesnames_141',·['c_PPStretchesNames',·['../namespacegmx_1_1analysismodules_1_1anonymous__namespace_02dssp_8cpp_03.xhtml#acd7005765b5321aa2e84a1efa94e4804',·1,·'gmx::analysismodules::anonymous_namespace{dssp.cpp}']]], | 180 | ····['c_5fppstretchesnames_141',·['c_PPStretchesNames',·['../namespacegmx_1_1analysismodules_1_1anonymous__namespace_02dssp_8cpp_03.xhtml#acd7005765b5321aa2e84a1efa94e4804',·1,·'gmx::analysismodules::anonymous_namespace{dssp.cpp}']]], |
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188 | ····['c_5fpullmaxnumlocalatomssinglethreaded_149',·['c_pullMaxNumLocalAtomsSingleThreaded',·['../pull__internal_8h.xhtml#ad00c367c39da602d9a06dae3e78e3906',·1,·'pull_internal.h']]], | 188 | ····['c_5fpullmaxnumlocalatomssinglethreaded_149',·['c_pullMaxNumLocalAtomsSingleThreaded',·['../pull__internal_8h.xhtml#ad00c367c39da602d9a06dae3e78e3906',·1,·'pull_internal.h']]], |
189 | ····['c_5fqmmmcp2kmodulename_150',·['c_qmmmCP2KModuleName',·['../namespacegmx.xhtml#a2dc5d75b30933ef685d2af785d491f84',·1,·'gmx']]], | 189 | ····['c_5fqmmmcp2kmodulename_150',·['c_qmmmCP2KModuleName',·['../namespacegmx.xhtml#a2dc5d75b30933ef685d2af785d491f84',·1,·'gmx']]], |
190 | ····['c_5fqmmmqmmethodnames_151',·['c_qmmmQMMethodNames',·['../namespacegmx.xhtml#afc6d6c1e63e76316db42e69f486d058f',·1,·'gmx']]], | 190 | ····['c_5fqmmmqmmethodnames_151',·['c_qmmmQMMethodNames',·['../namespacegmx.xhtml#afc6d6c1e63e76316db42e69f486d058f',·1,·'gmx']]], |
191 | ····['c_5frefcoordscalingfortests_152',·['c_refCoordScalingForTests',·['../namespacegmx_1_1test_1_1anonymous__namespace_02position__restraints_8cpp_03.xhtml#a3420204ff48374d1304ea0440d3fb0b9',·1,·'gmx::test::anonymous_namespace{position_restraints.cpp}']]], | 191 | ····['c_5frefcoordscalingfortests_152',·['c_refCoordScalingForTests',·['../namespacegmx_1_1test_1_1anonymous__namespace_02position__restraints_8cpp_03.xhtml#a3420204ff48374d1304ea0440d3fb0b9',·1,·'gmx::test::anonymous_namespace{position_restraints.cpp}']]], |
192 | ····['c_5fregexstringstoskip_153',·['c_regexStringsToSkip',·['../namespacegmx_1_1test_1_1anonymous__namespace_02pdb2gmx_8cpp_03.xhtml#ae31eabd72e6bdd29eb10117291c65c32',·1,·'gmx::test::anonymous_namespace{pdb2gmx.cpp}']]], | 192 | ····['c_5fregexstringstoskip_153',·['c_regexStringsToSkip',·['../namespacegmx_1_1test_1_1anonymous__namespace_02pdb2gmx_8cpp_03.xhtml#ae31eabd72e6bdd29eb10117291c65c32',·1,·'gmx::test::anonymous_namespace{pdb2gmx.cpp}']]], |
193 | ····['c_5fresiduenumberingtypenames_154',·['c_residueNumberingTypeNames',·['../namespacegmx_1_1analysismodules_1_1anonymous__namespace_02select_8cpp_03.xhtml#aacce3e6b8a3d818ebca234f667803dd9',·1,·'gmx::analysismodules::anonymous_namespace{select.cpp}']]], | 193 | ····['c_5fresiduenumberingtypenames_154',·['c_residueNumberingTypeNames',·['../namespacegmx_1_1analysismodules_1_1anonymous__namespace_02select_8cpp_03.xhtml#aacce3e6b8a3d818ebca234f667803dd9',·1,·'gmx::analysismodules::anonymous_namespace{select.cpp}']]], |
194 | ····['c_5frf_155',·['c_rf',·['../structNBParamGpu.xhtml#a7b6221b3de733d7daff18614942d2146',·1,·'NBParamGpu::c_rf'], | ||
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197 | ····['c_5frocffterrorstrings_156',·['c_rocfftErrorStrings',·['../namespacegmx_1_1anonymous__namespace_02gpu__3dfft__sycl__rocfft_8cpp_03.xhtml#a760553c2167f04e28ac17eef73595bc9',·1,·'gmx::anonymous_namespace{gpu_3dfft_sycl_rocfft.cpp}']]], | 197 | ····['c_5frocffterrorstrings_156',·['c_rocfftErrorStrings',·['../namespacegmx_1_1anonymous__namespace_02gpu__3dfft__sycl__rocfft_8cpp_03.xhtml#a760553c2167f04e28ac17eef73595bc9',·1,·'gmx::anonymous_namespace{gpu_3dfft_sycl_rocfft.cpp}']]], |
198 | ····['c_5frootnodename_157',·['c_RootNodeName',·['../namespacegmx_1_1test_1_1anonymous__namespace_02refdata__xml_8cpp_03.xhtml#af8fced14cf0f669ed507c1d04af58fe2',·1,·'gmx::test::anonymous_namespace{refdata_xml.cpp}']]], | 198 | ····['c_5frootnodename_157',·['c_RootNodeName',·['../namespacegmx_1_1test_1_1anonymous__namespace_02refdata__xml_8cpp_03.xhtml#af8fced14cf0f669ed507c1d04af58fe2',·1,·'gmx::test::anonymous_namespace{refdata_xml.cpp}']]], |
199 | ····['c_5fsampleforcesfull_158',·['c_sampleForcesFull',·['../namespacegmx_1_1test_1_1anonymous__namespace_02pmegathertest_8cpp_03.xhtml#a096c0d45afd6872145063fb37bfca485',·1,·'gmx::test::anonymous_namespace{pmegathertest.cpp}']]], | 199 | ····['c_5fsampleforcesfull_158',·['c_sampleForcesFull',·['../namespacegmx_1_1test_1_1anonymous__namespace_02pmegathertest_8cpp_03.xhtml#a096c0d45afd6872145063fb37bfca485',·1,·'gmx::test::anonymous_namespace{pmegathertest.cpp}']]], |
200 | ····['c_5fscihistogramsize_159',·['c_sciHistogramSize',·['../gpu__types__common_8h.xhtml#a092d8a8e21b474d0d27776b4686d068b',·1,·'gpu_types_common.h']]], | 200 | ····['c_5fscihistogramsize_159',·['c_sciHistogramSize',·['../gpu__types__common_8h.xhtml#a092d8a8e21b474d0d27776b4686d068b',·1,·'gpu_types_common.h']]], |
201 | ····['c_5fscisortingthreadsperblock_160',·['c_sciSortingThreadsPerBlock',·['../gpu__types__common_8h.xhtml#a0a2c3f6f909bbaf08311886deb9123d4',·1,·'gpu_types_common.h']]], | 201 | ····['c_5fscisortingthreadsperblock_160',·['c_sciSortingThreadsPerBlock',·['../gpu__types__common_8h.xhtml#a0a2c3f6f909bbaf08311886deb9123d4',·1,·'gpu_types_common.h']]], |
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586 | ····['checkmpicudaawaresupport_444',·['checkMpiCudaAwareSupport',·['../namespacegmx.xhtml#aa4aa18316458b9837f41b40a4d997243',·1,·'gmx']]], | 586 | ····['checkmpicudaawaresupport_444',·['checkMpiCudaAwareSupport',·['../namespacegmx.xhtml#aa4aa18316458b9837f41b40a4d997243',·1,·'gmx']]], |
587 | ····['checkmpihipawaresupport_445',·['checkMpiHipAwareSupport',·['../namespacegmx.xhtml#ac38e0326b581ae6ef55106eb193d6102',·1,·'gmx']]], | 587 | ····['checkmpihipawaresupport_445',·['checkMpiHipAwareSupport',·['../namespacegmx.xhtml#ac38e0326b581ae6ef55106eb193d6102',·1,·'gmx']]], |
588 | ····['checkmpizeawaresupport_446',·['checkMpiZEAwareSupport',·['../namespacegmx.xhtml#a0be49c74d8346fa9f804a1eb893cc079',·1,·'gmx']]], | 588 | ····['checkmpizeawaresupport_446',·['checkMpiZEAwareSupport',·['../namespacegmx.xhtml#a0be49c74d8346fa9f804a1eb893cc079',·1,·'gmx']]], |
589 | ····['checkmtsconsistency_447',·['checkMtsConsistency',·['../namespacegmx_1_1anonymous__namespace_02read__params_8cpp_03.xhtml#a287b7de97b2cc6df4a0b68fd75fcfc18',·1,·'gmx::anonymous_namespace{read_params.cpp}']]], | 589 | ····['checkmtsconsistency_447',·['checkMtsConsistency',·['../namespacegmx_1_1anonymous__namespace_02read__params_8cpp_03.xhtml#a287b7de97b2cc6df4a0b68fd75fcfc18',·1,·'gmx::anonymous_namespace{read_params.cpp}']]], |
590 | ····['checkmtsinterval_448',·['checkMtsInterval',·['../namespacegmx_1_1anonymous__namespace_02multipletimestepping_8cpp_03.xhtml#a823d145982ecf32da116d92cbebbf805',·1,·'gmx::anonymous_namespace{multipletimestepping.cpp}']]], | 590 | ····['checkmtsinterval_448',·['checkMtsInterval',·['../namespacegmx_1_1anonymous__namespace_02multipletimestepping_8cpp_03.xhtml#a823d145982ecf32da116d92cbebbf805',·1,·'gmx::anonymous_namespace{multipletimestepping.cpp}']]], |
591 | ····['checkmtsrequirements_449',·['checkMtsRequirements',·['../namespacegmx.xhtml#a2e38a14714bf12072a97722e7e0283de',·1,·'gmx']]], | 591 | ····['checkmtsrequirements_449',·['checkMtsRequirements',·['../namespacegmx.xhtml#a2e38a14714bf12072a97722e7e0283de',·1,·'gmx']]], |
592 | ····['checkoutput_450',·['checkoutput',·['../namespacegmx_1_1test_1_1anonymous__namespace_02pairs_8cpp_03.xhtml#a8f6efb4f1b93d0ef5503066d1f8dafc0',·1,·'gmx::test::anonymous_namespace{pairs.cpp}::checkOutput()'], | 592 | ····['checkoutput_450',·['checkoutput',·['../namespacegmx_1_1test_1_1anonymous__namespace_02pairs_8cpp_03.xhtml#a8f6efb4f1b93d0ef5503066d1f8dafc0',·1,·'gmx::test::anonymous_namespace{pairs.cpp}::checkOutput()'], |
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596 | ····['checkoutputfile_451',·['checkOutputFile',·['../namespacegmx_1_1anonymous__namespace_02handlerestart_8cpp_03.xhtml#a4722c398737a57532ac4dee489f859c9',·1,·'gmx::anonymous_namespace{handlerestart.cpp}']]], | 596 | ····['checkoutputfile_451',·['checkOutputFile',·['../namespacegmx_1_1anonymous__namespace_02handlerestart_8cpp_03.xhtml#a4722c398737a57532ac4dee489f859c9',·1,·'gmx::anonymous_namespace{handlerestart.cpp}']]], |
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601 | ····['checkpendingdeviceerrorbetweensteps_454',·['checkPendingDeviceErrorBetweenSteps',·['../gpu__utils_8h.xhtml#ab937dc6d3bcdc40cbebc923a200823c3',·1,·'gpu_utils.h']]], | 601 | ····['checkpendingdeviceerrorbetweensteps_454',·['checkPendingDeviceErrorBetweenSteps',·['../gpu__utils_8h.xhtml#ab937dc6d3bcdc40cbebc923a200823c3',·1,·'gpu_utils.h']]], |
602 | ····['checkpoint_2ecpp_455',·['checkpoint.cpp',·['../programs_2mdrun_2tests_2checkpoint_8cpp.xhtml',·1,·'(Global·Namespace)'], | 602 | ····['checkpoint_2ecpp_455',·['checkpoint.cpp',·['../programs_2mdrun_2tests_2checkpoint_8cpp.xhtml',·1,·'(Global·Namespace)'], |
603 | ········['../gromacs_2fileio_2tests_2checkpoint_8cpp.xhtml',·1,·'(Global·Namespace)'] | 603 | ········['../gromacs_2fileio_2tests_2checkpoint_8cpp.xhtml',·1,·'(Global·Namespace)'] |
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605 | ····['checkpointdata_456',·['checkpointdata',·['../classgmx_1_1CheckpointData.xhtml',·1,·'gmx::CheckpointData<·operation·>'], | 605 | ····['checkpointdata_456',·['checkpointdata',·['../classgmx_1_1CheckpointData.xhtml',·1,·'gmx::CheckpointData<·operation·>'], |
606 | ········['../classgmx_1_1ReadCheckpointDataHolder.xhtml#aa936b2ff015565992412f7b6d7cb911d',·1,·'gmx::ReadCheckpointDataHolder::checkpointData()'], | ||
606 | ········['../classgmx_1_1WriteCheckpointDataHolder.xhtml#a68e115c68a7f9e55d495c84d104cf699',·1,·'gmx::WriteCheckpointDataHolder::checkpointData()'] | 607 | ········['../classgmx_1_1WriteCheckpointDataHolder.xhtml#a68e115c68a7f9e55d495c84d104cf699',·1,·'gmx::WriteCheckpointDataHolder::checkpointData()'] |
607 | ········['../classgmx_1_1ReadCheckpointDataHolder.xhtml#aa936b2ff015565992412f7b6d7cb911d',·1,·'gmx::ReadCheckpointDataHolder::checkpointData()'] | ||
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609 | ····['checkpointdata_2ecpp_457',·['checkpointdata.cpp',·['../checkpointdata_8cpp.xhtml',·1,·'']]], | 609 | ····['checkpointdata_2ecpp_457',·['checkpointdata.cpp',·['../checkpointdata_8cpp.xhtml',·1,·'']]], |
610 | ····['checkpointdata_2eh_458',·['checkpointdata.h',·['../checkpointdata_8h.xhtml',·1,·'']]], | 610 | ····['checkpointdata_2eh_458',·['checkpointdata.h',·['../checkpointdata_8h.xhtml',·1,·'']]], |
611 | ····['checkpointdataoperation_459',·['CheckpointDataOperation',·['../group__module__modularsimulator.xhtml#gabb7ceb8d8304529be41677ede2f9b40c',·1,·'gmx']]], | 611 | ····['checkpointdataoperation_459',·['CheckpointDataOperation',·['../group__module__modularsimulator.xhtml#gabb7ceb8d8304529be41677ede2f9b40c',·1,·'gmx']]], |
612 | ····['checkpointdatatest_460',·['CheckpointDataTest',·['../classgmx_1_1test_1_1anonymous__namespace_02checkpointdata_8cpp_03_1_1CheckpointDataTest.xhtml',·1,·'gmx::test::anonymous_namespace{checkpointdata.cpp}']]], | 612 | ····['checkpointdatatest_460',·['CheckpointDataTest',·['../classgmx_1_1test_1_1anonymous__namespace_02checkpointdata_8cpp_03_1_1CheckpointDataTest.xhtml',·1,·'gmx::test::anonymous_namespace{checkpointdata.cpp}']]], |
613 | ····['checkpointeddata_5f_461',·['checkpointedData_',·['../structgmx_1_1MDModulesCheckpointReadingDataOnMain.xhtml#aa5e134e843fc9b37d2c758ad89a1f5a3',·1,·'gmx::MDModulesCheckpointReadingDataOnMain']]], | 613 | ····['checkpointeddata_5f_461',·['checkpointedData_',·['../structgmx_1_1MDModulesCheckpointReadingDataOnMain.xhtml#aa5e134e843fc9b37d2c758ad89a1f5a3',·1,·'gmx::MDModulesCheckpointReadingDataOnMain']]], |
614 | ····['checkpointerror_462',·['checkpointerror',·['../classgmx_1_1CheckpointError.xhtml',·1,·'gmx::CheckpointError'], | 614 | ····['checkpointerror_462',·['checkpointerror',·['../classgmx_1_1CheckpointError.xhtml',·1,·'gmx::CheckpointError'], |
615 | ········['../group__module__modularsimulator.xhtml#ga9c22b8b5f95575b0ead65c36ea4927e5',·1,·'gmx::CheckpointError::CheckpointError()'] | 615 | ········['../group__module__modularsimulator.xhtml#ga9c22b8b5f95575b0ead65c36ea4927e5',·1,·'gmx::CheckpointError::CheckpointError()'] |
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617 | ····['checkpointhandler_463',·['checkpointhandler',·['../classgmx_1_1CheckpointHandler.xhtml',·1,·'gmx::CheckpointHandler'], | ||
618 | ····· | 617 | ····['checkpointhandler_463',·['checkpointhandler',·['../classgmx_1_1CheckpointHandler.xhtml#a2385df0eebf7dc0a755d54795556760c',·1,·'gmx::CheckpointHandler::CheckpointHandler()'], |
618 | ········['../classgmx_1_1CheckpointHandler.xhtml',·1,·'gmx::CheckpointHandler'] | ||
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620 | ····['checkpointhandler_2ecpp_464',·['checkpointhandler.cpp',·['../checkpointhandler_8cpp.xhtml',·1,·'']]], | 620 | ····['checkpointhandler_2ecpp_464',·['checkpointhandler.cpp',·['../checkpointhandler_8cpp.xhtml',·1,·'']]], |
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622 | ····['checkpointheadercontents_466',·['CheckpointHeaderContents',·['../structCheckpointHeaderContents.xhtml',·1,·'']]], | 622 | ····['checkpointheadercontents_466',·['CheckpointHeaderContents',·['../structCheckpointHeaderContents.xhtml',·1,·'']]], |
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624 | ········['../classgmx_1_1CheckpointHelper.xhtml#a1a149c713b44551748da6e338d09f9d4',·1,·'gmx::CheckpointHelper::CheckpointHelper()'] | 624 | ········['../classgmx_1_1CheckpointHelper.xhtml#a1a149c713b44551748da6e338d09f9d4',·1,·'gmx::CheckpointHelper::CheckpointHelper()'] |
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825 | ····['clearframe_576',·['clearFrame',·['../classgmx_1_1internal_1_1AnalysisDataStorageFrameData.xhtml#a48fe32216f9402146ba0a12097600e60',·1,·'gmx::internal::AnalysisDataStorageFrameData']]], | 825 | ····['clearframe_576',·['clearFrame',·['../classgmx_1_1internal_1_1AnalysisDataStorageFrameData.xhtml#a48fe32216f9402146ba0a12097600e60',·1,·'gmx::internal::AnalysisDataStorageFrameData']]], |
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828 | ····['clearifneeded_579',·['clearIfNeeded',·['../classChainIdFiller.xhtml#a751d1d8479b26c11d20c4085a0981121',·1,·'ChainIdFiller']]], | 828 | ····['clearifneeded_579',·['clearIfNeeded',·['../classChainIdFiller.xhtml#a751d1d8479b26c11d20c4085a0981121',·1,·'ChainIdFiller']]], |
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830 | ····['clearset_581',·['clearset',·['../classgmx_1_1OptionStorageTemplate.xhtml#aacee4c66708e962661689f08a462739a',·1,·'gmx::OptionStorageTemplate::clearSet()'], | ||
831 | ····· | 830 | ····['clearset_581',·['clearset',·['../classgmx_1_1AbstractOptionStorage.xhtml#a3777ada9336d3fd52068a9929b6fb3b8',·1,·'gmx::AbstractOptionStorage::clearSet()'], |
831 | ········['../classgmx_1_1OptionStorageTemplate.xhtml#aacee4c66708e962661689f08a462739a',·1,·'gmx::OptionStorageTemplate::clearSet()'] | ||
832 | ····]], | 832 | ····]], |
833 | ····['clearsymboltable_582',·['clearSymbolTable',·['../classgmx_1_1SelectionCollection_1_1Impl.xhtml#ab674dda1a30837dcbacb7a043f339a19',·1,·'gmx::SelectionCollection::Impl']]], | 833 | ····['clearsymboltable_582',·['clearSymbolTable',·['../classgmx_1_1SelectionCollection_1_1Impl.xhtml#ab674dda1a30837dcbacb7a043f339a19',·1,·'gmx::SelectionCollection::Impl']]], |
834 | ····['cleartaskforcebufferusedelements_583',·['clearTaskForceBufferUsedElements',·['../namespacegmx.xhtml#a9c65d4e61132e4ba154b1b1e8d772483',·1,·'gmx']]], | 834 | ····['cleartaskforcebufferusedelements_583',·['clearTaskForceBufferUsedElements',·['../namespacegmx.xhtml#a9c65d4e61132e4ba154b1b1e8d772483',·1,·'gmx']]], |
835 | ····['clfftinitializer_584',·['clfftinitializer',·['../classgmx_1_1ClfftInitializer.xhtml',·1,·'gmx::ClfftInitializer'], | 835 | ····['clfftinitializer_584',·['clfftinitializer',·['../classgmx_1_1ClfftInitializer.xhtml',·1,·'gmx::ClfftInitializer'], |
836 | ········['../classgmx_1_1ClfftInitializer.xhtml#a8e52d5eb9696dbfff76e6bdc9d56353b',·1,·'gmx::ClfftInitializer::ClfftInitializer()'] | 836 | ········['../classgmx_1_1ClfftInitializer.xhtml#a8e52d5eb9696dbfff76e6bdc9d56353b',·1,·'gmx::ClfftInitializer::ClfftInitializer()'] |
837 | ····]], | 837 | ····]], |
838 | ····['clfftinitializer_2ecpp_585',·['clfftinitializer.cpp',·['../ | 838 | ····['clfftinitializer_2ecpp_585',·['clfftinitializer.cpp',·['../clfftinitializer_8cpp.xhtml',·1,·'(Global·Namespace)'], |
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840 | ····]], | 840 | ····]], |
841 | ····['clfftinitializer_2eh_586',·['clfftinitializer.h',·['../clfftinitializer_8h.xhtml',·1,·'']]], | 841 | ····['clfftinitializer_2eh_586',·['clfftinitializer.h',·['../clfftinitializer_8h.xhtml',·1,·'']]], |
842 | ····['clhandle_587',·['clhandle',·['../classgmx_1_1ClHandle.xhtml',·1,·'gmx::ClHandle<·cl_type·>'], | 842 | ····['clhandle_587',·['clhandle',·['../classgmx_1_1ClHandle.xhtml',·1,·'gmx::ClHandle<·cl_type·>'], |
843 | ········['../classgmx_1_1ClHandle.xhtml#a506140fa32d43652bcffc0dc2f95c366',·1,·'gmx::ClHandle::ClHandle(ClHandle·&&)·noexcept=default'], | 843 | ········['../classgmx_1_1ClHandle.xhtml#a506140fa32d43652bcffc0dc2f95c366',·1,·'gmx::ClHandle::ClHandle(ClHandle·&&)·noexcept=default'], |
844 | ········['../classgmx_1_1ClHandle.xhtml#a2dce49849ee0051ee05990c651f0b56a',·1,·'gmx::ClHandle::ClHandle(const·ClHandle·&)=delete'], | 844 | ········['../classgmx_1_1ClHandle.xhtml#a2dce49849ee0051ee05990c651f0b56a',·1,·'gmx::ClHandle::ClHandle(const·ClHandle·&)=delete'], |
845 | ········['../classgmx_1_1ClHandle.xhtml#afa26827973b650e659cec6b3fdb90a1c',·1,·'gmx::ClHandle::ClHandle()=delete'], | 845 | ········['../classgmx_1_1ClHandle.xhtml#afa26827973b650e659cec6b3fdb90a1c',·1,·'gmx::ClHandle::ClHandle()=delete'], |
846 | ········['../classgmx_1_1ClHandle.xhtml#a27f1a3d671ccf77c8c5c724d2c38d0db',·1,·'gmx::ClHandle::ClHandle(cl_type·handle)'] | 846 | ········['../classgmx_1_1ClHandle.xhtml#a27f1a3d671ccf77c8c5c724d2c38d0db',·1,·'gmx::ClHandle::ClHandle(cl_type·handle)'] |
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427 | ····['densityfit_2ecpp_265',·['densityfit.cpp',·['../tests_2densityfit_8cpp.xhtml',·1,·'(Global·Namespace)'], | 427 | ····['densityfit_2ecpp_265',·['densityfit.cpp',·['../tests_2densityfit_8cpp.xhtml',·1,·'(Global·Namespace)'], |
428 | ········['../densityfit_8cpp.xhtml',·1,·'(Global·Namespace)'] | 428 | ········['../densityfit_8cpp.xhtml',·1,·'(Global·Namespace)'] |
429 | ····]], | 429 | ····]], |
430 | ····['densityfit_2eh_266',·['densityfit.h',·['../densityfit_8h.xhtml',·1,·'']]], | 430 | ····['densityfit_2eh_266',·['densityfit.h',·['../densityfit_8h.xhtml',·1,·'']]], |
431 | ····['densityfitting_267',·['densityfitting',·['../classgmx_1_1anonymous__namespace_02densityfitting_8cpp_03_1_1DensityFitting.xhtml#aa9839e3720a234577932dd8d647294c7',·1,·'gmx::anonymous_namespace{densityfitting.cpp}::DensityFitting::DensityFitting()'], | 431 | ····['densityfitting_267',·['densityfitting',·['../classgmx_1_1anonymous__namespace_02densityfitting_8cpp_03_1_1DensityFitting.xhtml#aa9839e3720a234577932dd8d647294c7',·1,·'gmx::anonymous_namespace{densityfitting.cpp}::DensityFitting::DensityFitting()'], |
432 | ········['../classgmx_1_1anonymous__namespace_02densityfitting_8cpp_03_1_1DensityFitting.xhtml',·1,·'gmx::anonymous_namespace{densityfitting.cpp}::DensityFitting'] | 432 | ········['../classgmx_1_1anonymous__namespace_02densityfitting_8cpp_03_1_1DensityFitting.xhtml',·1,·'gmx::anonymous_namespace{densityfitting.cpp}::DensityFitting'] |
433 | ····]], | 433 | ····]], |
434 | ····['densityfitting_2ecpp_268',·['densityfitting.cpp',·['../ | 434 | ····['densityfitting_2ecpp_268',·['densityfitting.cpp',·['../densityfitting_8cpp.xhtml',·1,·'(Global·Namespace)'], |
435 | ········['../densityfitting_8cpp.xhtml',·1,·'(Global·Namespace)'] | 435 | ········['../tests_2densityfitting_8cpp.xhtml',·1,·'(Global·Namespace)'] |
436 | ····]], | 436 | ····]], |
437 | ····['densityfittingamplitudelookup_269',·['densityfittingamplitudelookup',·['../classgmx_1_1DensityFittingAmplitudeLookup.xhtml',·1,·'gmx::DensityFittingAmplitudeLookup'], | 437 | ····['densityfittingamplitudelookup_269',·['densityfittingamplitudelookup',·['../classgmx_1_1DensityFittingAmplitudeLookup.xhtml#aa1d2f04d8d7aae3d5622cd859a201cbb',·1,·'gmx::DensityFittingAmplitudeLookup::DensityFittingAmplitudeLookup(const·DensityFittingAmplitudeLookup·&other)'], |
438 | ········['../classgmx_1_1DensityFittingAmplitudeLookup.xhtml#ab390de4a90d3b122cc6d54862bfc158f',·1,·'gmx::DensityFittingAmplitudeLookup::DensityFittingAmplitudeLookup(DensityFittingAmplitudeLookup·&&other)·noexcept'], | 438 | ········['../classgmx_1_1DensityFittingAmplitudeLookup.xhtml#ab390de4a90d3b122cc6d54862bfc158f',·1,·'gmx::DensityFittingAmplitudeLookup::DensityFittingAmplitudeLookup(DensityFittingAmplitudeLookup·&&other)·noexcept'], |
439 | ········['../classgmx_1_1DensityFittingAmplitudeLookup.xhtml#aa1d2f04d8d7aae3d5622cd859a201cbb',·1,·'gmx::DensityFittingAmplitudeLookup::DensityFittingAmplitudeLookup(const·DensityFittingAmplitudeLookup·&other)'], | ||
440 | ········['../classgmx_1_1DensityFittingAmplitudeLookup.xhtml#a59fc899181bcc2e39969fa553087444d',·1,·'gmx::DensityFittingAmplitudeLookup::DensityFittingAmplitudeLookup(const·DensityFittingAmplitudeMethod·&method)'] | 439 | ········['../classgmx_1_1DensityFittingAmplitudeLookup.xhtml#a59fc899181bcc2e39969fa553087444d',·1,·'gmx::DensityFittingAmplitudeLookup::DensityFittingAmplitudeLookup(const·DensityFittingAmplitudeMethod·&method)'], |
440 | ········['../classgmx_1_1DensityFittingAmplitudeLookup.xhtml',·1,·'gmx::DensityFittingAmplitudeLookup'] | ||
441 | ····]], | 441 | ····]], |
442 | ····['densityfittingamplitudelookup_2ecpp_270',·['densityfittingamplitudelookup.cpp',·['../densityfittingamplitudelookup_8cpp.xhtml',·1,·'(Global·Namespace)'], | 442 | ····['densityfittingamplitudelookup_2ecpp_270',·['densityfittingamplitudelookup.cpp',·['../tests_2densityfittingamplitudelookup_8cpp.xhtml',·1,·'(Global·Namespace)'], |
443 | ········['../ | 443 | ········['../densityfittingamplitudelookup_8cpp.xhtml',·1,·'(Global·Namespace)'] |
444 | ····]], | 444 | ····]], |
445 | ····['densityfittingamplitudelookup_2eh_271',·['densityfittingamplitudelookup.h',·['../densityfittingamplitudelookup_8h.xhtml',·1,·'']]], | 445 | ····['densityfittingamplitudelookup_2eh_271',·['densityfittingamplitudelookup.h',·['../densityfittingamplitudelookup_8h.xhtml',·1,·'']]], |
446 | ····['densityfittingamplitudemethod_272',·['DensityFittingAmplitudeMethod',·['../namespacegmx.xhtml#ab0ad78613a262a1d4fcce5d18525099f',·1,·'gmx']]], | 446 | ····['densityfittingamplitudemethod_272',·['DensityFittingAmplitudeMethod',·['../namespacegmx.xhtml#ab0ad78613a262a1d4fcce5d18525099f',·1,·'gmx']]], |
447 | ····['densityfittingforce_273',·['densityfittingforce',·['../classgmx_1_1DensityFittingForce.xhtml#a4515397cbc5ab594e8e9066302e02eca',·1,·'gmx::DensityFittingForce::DensityFittingForce(const·DensityFittingForce·&other)'], | ||
448 | ····· | 447 | ····['densityfittingforce_273',·['densityfittingforce',·['../classgmx_1_1DensityFittingForce.xhtml#a3eab6d07afa82b211179207e74072ff0',·1,·'gmx::DensityFittingForce::DensityFittingForce(DensityFittingForce·&&other)·noexcept'], |
448 | ········['../classgmx_1_1DensityFittingForce.xhtml#a4515397cbc5ab594e8e9066302e02eca',·1,·'gmx::DensityFittingForce::DensityFittingForce(const·DensityFittingForce·&other)'], | ||
449 | ········['../classgmx_1_1DensityFittingForce.xhtml#acf7150b3a47e6878c27e70500c221d4a',·1,·'gmx::DensityFittingForce::DensityFittingForce(const·GaussianSpreadKernelParameters::Shape·&kernelShapeParameters)'], | 449 | ········['../classgmx_1_1DensityFittingForce.xhtml#acf7150b3a47e6878c27e70500c221d4a',·1,·'gmx::DensityFittingForce::DensityFittingForce(const·GaussianSpreadKernelParameters::Shape·&kernelShapeParameters)'], |
450 | ········['../classgmx_1_1DensityFittingForce.xhtml',·1,·'gmx::DensityFittingForce'] | 450 | ········['../classgmx_1_1DensityFittingForce.xhtml',·1,·'gmx::DensityFittingForce'] |
451 | ····]], | 451 | ····]], |
452 | ····['densityfittingforce_2ecpp_274',·['densityfittingforce.cpp',·['../densityfittingforce_8cpp.xhtml',·1,·'(Global·Namespace)'], | 452 | ····['densityfittingforce_2ecpp_274',·['densityfittingforce.cpp',·['../densityfittingforce_8cpp.xhtml',·1,·'(Global·Namespace)'], |
453 | ········['../tests_2densityfittingforce_8cpp.xhtml',·1,·'(Global·Namespace)'] | 453 | ········['../tests_2densityfittingforce_8cpp.xhtml',·1,·'(Global·Namespace)'] |
454 | ····]], | 454 | ····]], |
455 | ····['densityfittingforce_2eh_275',·['densityfittingforce.h',·['../densityfittingforce_8h.xhtml',·1,·'']]], | 455 | ····['densityfittingforce_2eh_275',·['densityfittingforce.h',·['../densityfittingforce_8h.xhtml',·1,·'']]], |
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612 | ····['deviceinfolist_5f_377',·['deviceInfoList_',·['../structgmx_1_1DeviceDetectionResult.xhtml#a70ea01a606765254475f43b92a678218',·1,·'gmx::DeviceDetectionResult']]], | 612 | ····['deviceinfolist_5f_377',·['deviceInfoList_',·['../structgmx_1_1DeviceDetectionResult.xhtml#a70ea01a606765254475f43b92a678218',·1,·'gmx::DeviceDetectionResult']]], |
613 | ····['deviceinformation_378',·['DeviceInformation',·['../structDeviceInformation.xhtml',·1,·'']]], | 613 | ····['deviceinformation_378',·['DeviceInformation',·['../structDeviceInformation.xhtml',·1,·'']]], |
614 | ····['devicenottargeted_379',·['DeviceNotTargeted',·['../device__information_8h.xhtml#a0b85af2bfbb9599409b639e98717c888ae0a8f15beccf0777dc0db7d1596b1e02',·1,·'device_information.h']]], | 614 | ····['devicenottargeted_379',·['DeviceNotTargeted',·['../device__information_8h.xhtml#a0b85af2bfbb9599409b639e98717c888ae0a8f15beccf0777dc0db7d1596b1e02',·1,·'device_information.h']]], |
615 | ····['devices_380',·['devices',·['../structgmx_1_1HardwareTopology_1_1Machine.xhtml#a2e5f16d9ac9b2a7e020450a8bbde0c67',·1,·'gmx::HardwareTopology::Machine']]], | 615 | ····['devices_380',·['devices',·['../structgmx_1_1HardwareTopology_1_1Machine.xhtml#a2e5f16d9ac9b2a7e020450a8bbde0c67',·1,·'gmx::HardwareTopology::Machine']]], |
616 | ····['devicesselectedbyuser_381',·['devicesSelectedByUser',·['../structgmx__hw__opt__t.xhtml#afcd054472cdb483614394e44d8526ac2',·1,·'gmx_hw_opt_t']]], | 616 | ····['devicesselectedbyuser_381',·['devicesSelectedByUser',·['../structgmx__hw__opt__t.xhtml#afcd054472cdb483614394e44d8526ac2',·1,·'gmx_hw_opt_t']]], |
617 | ····['devicestatus_382',·['DeviceStatus',·['../device__information_8h.xhtml#a0b85af2bfbb9599409b639e98717c888',·1,·'device_information.h']]], | 617 | ····['devicestatus_382',·['DeviceStatus',·['../device__information_8h.xhtml#a0b85af2bfbb9599409b639e98717c888',·1,·'device_information.h']]], |
618 | ····['devicestream_383',·['devicestream',·['../classDeviceStream.xhtml',·1,·'DeviceStream'], | 618 | ····['devicestream_383',·['devicestream',·['../classDeviceStream.xhtml',·1,·'DeviceStream'], |
619 | ········['../classDeviceStream.xhtml#acec1cd32716673fce69738e57e3b4ccb',·1,·'DeviceStream::DeviceStream()'], | ||
620 | ········['../classgmx_1_1test_1_1TestDevice.xhtml#afa7d5d2194cded2f8d2717fe85eb47de',·1,·'gmx::test::TestDevice::deviceStream()'] | 619 | ········['../classgmx_1_1test_1_1TestDevice.xhtml#afa7d5d2194cded2f8d2717fe85eb47de',·1,·'gmx::test::TestDevice::deviceStream()'], |
620 | ········['../classDeviceStream.xhtml#acec1cd32716673fce69738e57e3b4ccb',·1,·'DeviceStream::DeviceStream()'] | ||
621 | ····]], | 621 | ····]], |
622 | ····['devicestreammanager_384',·['devicestreammanager',·['../classgmx_1_1DeviceStreamManager.xhtml#af4af89575a6d318fe0d107f74df07122',·1,·'gmx::DeviceStreamManager::DeviceStreamManager()'], | 622 | ····['devicestreammanager_384',·['devicestreammanager',·['../classgmx_1_1DeviceStreamManager.xhtml#af4af89575a6d318fe0d107f74df07122',·1,·'gmx::DeviceStreamManager::DeviceStreamManager()'], |
623 | ········['../classgmx_1_1DeviceStreamManager.xhtml',·1,·'gmx::DeviceStreamManager'] | 623 | ········['../classgmx_1_1DeviceStreamManager.xhtml',·1,·'gmx::DeviceStreamManager'] |
624 | ····]], | 624 | ····]], |
625 | ····['devicestreammanagertest_385',·['DeviceStreamManagerTest',·['../classgmx_1_1test_1_1anonymous__namespace_02device__stream__manager_8cpp_03_1_1DeviceStreamManagerTest.xhtml',·1,·'gmx::test::anonymous_namespace{device_stream_manager.cpp}']]], | 625 | ····['devicestreammanagertest_385',·['DeviceStreamManagerTest',·['../classgmx_1_1test_1_1anonymous__namespace_02device__stream__manager_8cpp_03_1_1DeviceStreamManagerTest.xhtml',·1,·'gmx::test::anonymous_namespace{device_stream_manager.cpp}']]], |
626 | ····['devicestreampriority_386',·['DeviceStreamPriority',·['../device__stream_8h.xhtml#a745c3a25d092600ae45b68d7e73d8319',·1,·'device_stream.h']]], | 626 | ····['devicestreampriority_386',·['DeviceStreamPriority',·['../device__stream_8h.xhtml#a745c3a25d092600ae45b68d7e73d8319',·1,·'device_stream.h']]], |
627 | ····['devicestreams_387',·['deviceStreams',·['../structNbnxmGpu.xhtml#ad744a8ed17f666335812b98b2dd6091d',·1,·'NbnxmGpu']]], | 627 | ····['devicestreams_387',·['deviceStreams',·['../structNbnxmGpu.xhtml#ad744a8ed17f666335812b98b2dd6091d',·1,·'NbnxmGpu']]], |
628 | ····['devicestreamtype_388',·['DeviceStreamType',·['../namespacegmx.xhtml#a90e1f148d98685136b343e0a20d3c2e5',·1,·'gmx']]], | 628 | ····['devicestreamtype_388',·['DeviceStreamType',·['../namespacegmx.xhtml#a90e1f148d98685136b343e0a20d3c2e5',·1,·'gmx']]], |
629 | ····['devicetexture_389',·['devicetexture',·['../ | 629 | ····['devicetexture_389',·['devicetexture',·['../gputraits__sycl_8h.xhtml#a960fcf6fb2fa8586385940071cfaa2fa',·1,·'DeviceTexture: gputraits_sycl.h'], |
630 | ········['../ | 630 | ········['../devicebuffer__ocl_8h.xhtml#a960fcf6fb2fa8586385940071cfaa2fa',·1,·'DeviceTexture: devicebuffer_ocl.h'] |
631 | ····]], | 631 | ····]], |
632 | ····['devicetransfers_2ecpp_390',·['devicetransfers.cpp',·['../devicetransfers_8cpp.xhtml',·1,·'']]], | 632 | ····['devicetransfers_2ecpp_390',·['devicetransfers.cpp',·['../devicetransfers_8cpp.xhtml',·1,·'']]], |
633 | ····['devicetransfers_2eh_391',·['devicetransfers.h',·['../devicetransfers_8h.xhtml',·1,·'']]], | 633 | ····['devicetransfers_2eh_391',·['devicetransfers.h',·['../devicetransfers_8h.xhtml',·1,·'']]], |
634 | ····['devicetransfers_5focl_2ecpp_392',·['devicetransfers_ocl.cpp',·['../devicetransfers__ocl_8cpp.xhtml',·1,·'']]], | 634 | ····['devicetransfers_5focl_2ecpp_392',·['devicetransfers_ocl.cpp',·['../devicetransfers__ocl_8cpp.xhtml',·1,·'']]], |
635 | ····['devicetransfers_5fsycl_2ecpp_393',·['devicetransfers_sycl.cpp',·['../devicetransfers__sycl_8cpp.xhtml',·1,·'']]], | 635 | ····['devicetransfers_5fsycl_2ecpp_393',·['devicetransfers_sycl.cpp',·['../devicetransfers__sycl_8cpp.xhtml',·1,·'']]], |
636 | ····['devicevendor_394',·['devicevendor',·['../device__information_8h.xhtml#a5514710e3c78d4816da9e8d2e3cd508c',·1,·'DeviceVendor: device_information.h'], | 636 | ····['devicevendor_394',·['devicevendor',·['../device__information_8h.xhtml#a5514710e3c78d4816da9e8d2e3cd508c',·1,·'DeviceVendor: device_information.h'], |
637 | ········['../structDeviceInformation.xhtml#af4bb0f772e111410d33b2d1a72b3743f',·1,·'DeviceInformation::deviceVendor'] | 637 | ········['../structDeviceInformation.xhtml#af4bb0f772e111410d33b2d1a72b3743f',·1,·'DeviceInformation::deviceVendor'] |
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958 | ····]], | 958 | ····]], |
959 | ····['doubletostring_618',·['doubleToString',·['../group__module__utility.xhtml#gadd11829c264b9d9b89a68a0baf26a7bd',·1,·'gmx']]], | 959 | ····['doubletostring_618',·['doubleToString',·['../group__module__utility.xhtml#gadd11829c264b9d9b89a68a0baf26a7bd',·1,·'gmx']]], |
960 | ····['douchar_619',·['doUChar',·['../classgmx_1_1FileIOXdrSerializer.xhtml#a0a3c7b45d828e8a5dc31094d2e23aa19',·1,·'gmx::FileIOXdrSerializer']]], | 960 | ····['douchar_619',·['doUChar',·['../classgmx_1_1FileIOXdrSerializer.xhtml#a0a3c7b45d828e8a5dc31094d2e23aa19',·1,·'gmx::FileIOXdrSerializer']]], |
961 | ····['douchararray_620',·['doUCharArray',·['../classgmx_1_1FileIOXdrSerializer.xhtml#a0e2f90a62f8aaf7f554f41725fb8ee4b',·1,·'gmx::FileIOXdrSerializer']]], | 961 | ····['douchararray_620',·['doUCharArray',·['../classgmx_1_1FileIOXdrSerializer.xhtml#a0e2f90a62f8aaf7f554f41725fb8ee4b',·1,·'gmx::FileIOXdrSerializer']]], |
962 | ····['doushort_621',·['doUShort',·['../classgmx_1_1FileIOXdrSerializer.xhtml#aa1efcd8ea6bc77333af3390821a00590',·1,·'gmx::FileIOXdrSerializer']]], | 962 | ····['doushort_621',·['doUShort',·['../classgmx_1_1FileIOXdrSerializer.xhtml#aa1efcd8ea6bc77333af3390821a00590',·1,·'gmx::FileIOXdrSerializer']]], |
963 | ····['dsaupd_622',·['dsaupd',·['../gmx__arpack_8h.xhtml#aede26434dc7f4a1ae472eca9d5b7bf65',·1,·'gmx_arpack.h']]], | 963 | ····['dsaupd_622',·['dsaupd',·['../gmx__arpack_8h.xhtml#aede26434dc7f4a1ae472eca9d5b7bf65',·1,·'gmx_arpack.h']]], |
964 | ····['dseupd_623',·['dseupd',·['../gmx__arpack_8h.xhtml#aab6c14c639569f6bf80e7226979cb514',·1,·'gmx_arpack.h']]], | 964 | ····['dseupd_623',·['dseupd',·['../gmx__arpack_8h.xhtml#aab6c14c639569f6bf80e7226979cb514',·1,·'gmx_arpack.h']]], |
965 | ····['dssp_2ecpp_624',·['dssp.cpp',·['../ | 965 | ····['dssp_2ecpp_624',·['dssp.cpp',·['../tests_2dssp_8cpp.xhtml',·1,·'(Global·Namespace)'], |
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967 | ····]], | 967 | ····]], |
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969 | ····['dsspdata_5f_626',·['dsspData_',·['../structgmx_1_1analysismodules_1_1anonymous__namespace_02dssp_8cpp_03_1_1DsspStorageFrame.xhtml#a8399a04649caede9f20a0c8146faf1b1',·1,·'gmx::analysismodules::anonymous_namespace{dssp.cpp}::DsspStorageFrame']]], | 969 | ····['dsspdata_5f_626',·['dsspData_',·['../structgmx_1_1analysismodules_1_1anonymous__namespace_02dssp_8cpp_03_1_1DsspStorageFrame.xhtml#a8399a04649caede9f20a0c8146faf1b1',·1,·'gmx::analysismodules::anonymous_namespace{dssp.cpp}::DsspStorageFrame']]], |
970 | ····['dsspmoduletestdsspnb_627',·['DsspModuleTestDsspNB',·['../classgmx_1_1test_1_1anonymous__namespace_02dssp_8cpp_03_1_1DsspModuleTestDsspNB.xhtml',·1,·'gmx::test::anonymous_namespace{dssp.cpp}']]], | 970 | ····['dsspmoduletestdsspnb_627',·['DsspModuleTestDsspNB',·['../classgmx_1_1test_1_1anonymous__namespace_02dssp_8cpp_03_1_1DsspModuleTestDsspNB.xhtml',·1,·'gmx::test::anonymous_namespace{dssp.cpp}']]], |
971 | ····['dsspmoduletestdsspnonb_628',·['DsspModuleTestDsspNoNB',·['../classgmx_1_1test_1_1anonymous__namespace_02dssp_8cpp_03_1_1DsspModuleTestDsspNoNB.xhtml',·1,·'gmx::test::anonymous_namespace{dssp.cpp}']]], | 971 | ····['dsspmoduletestdsspnonb_628',·['DsspModuleTestDsspNoNB',·['../classgmx_1_1test_1_1anonymous__namespace_02dssp_8cpp_03_1_1DsspModuleTestDsspNoNB.xhtml',·1,·'gmx::test::anonymous_namespace{dssp.cpp}']]], |
972 | ····['dsspmoduletestgromacsnb_629',·['DsspModuleTestGromacsNB',·['../classgmx_1_1test_1_1anonymous__namespace_02dssp_8cpp_03_1_1DsspModuleTestGromacsNB.xhtml',·1,·'gmx::test::anonymous_namespace{dssp.cpp}']]], | 972 | ····['dsspmoduletestgromacsnb_629',·['DsspModuleTestGromacsNB',·['../classgmx_1_1test_1_1anonymous__namespace_02dssp_8cpp_03_1_1DsspModuleTestGromacsNB.xhtml',·1,·'gmx::test::anonymous_namespace{dssp.cpp}']]], |
973 | ····['dsspmoduletestgromacsnonb_630',·['DsspModuleTestGromacsNoNB',·['../classgmx_1_1test_1_1anonymous__namespace_02dssp_8cpp_03_1_1DsspModuleTestGromacsNoNB.xhtml',·1,·'gmx::test::anonymous_namespace{dssp.cpp}']]], | 973 | ····['dsspmoduletestgromacsnonb_630',·['DsspModuleTestGromacsNoNB',·['../classgmx_1_1test_1_1anonymous__namespace_02dssp_8cpp_03_1_1DsspModuleTestGromacsNoNB.xhtml',·1,·'gmx::test::anonymous_namespace{dssp.cpp}']]], |
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986 | ····['dtsample_5f_639',·['dtSample_',·['../classgmx_1_1CorrelationGrid.xhtml#ae2d1a1db7c90ff9b5d6ef325162d7df6',·1,·'gmx::CorrelationGrid']]], | 986 | ····['dtsample_5f_639',·['dtSample_',·['../classgmx_1_1CorrelationGrid.xhtml#ae2d1a1db7c90ff9b5d6ef325162d7df6',·1,·'gmx::CorrelationGrid']]], |
987 | ····['dummy_640',·['dummy',·['../structgmx__cache__protect__t.xhtml#a0b75c08cd19480c1994187c4cd59fcf7',·1,·'gmx_cache_protect_t']]], | 987 | ····['dummy_640',·['dummy',·['../structgmx__cache__protect__t.xhtml#a0b75c08cd19480c1994187c4cd59fcf7',·1,·'gmx_cache_protect_t']]], |
988 | ····['dummyconverterpointer_641',·['DummyConverterPointer',·['../namespacegmx_1_1test.xhtml#a045885840f37e8b63d82ff9519d0795e',·1,·'gmx::test']]], | 988 | ····['dummyconverterpointer_641',·['DummyConverterPointer',·['../namespacegmx_1_1test.xhtml#a045885840f37e8b63d82ff9519d0795e',·1,·'gmx::test']]], |
989 | ····['dummymass_642',·['dummyMass',·['../structVirtualSiteConfiguration.xhtml#a86c56dfa2a3ae3d2233025dd0211e6d4',·1,·'VirtualSiteConfiguration']]], | 989 | ····['dummymass_642',·['dummyMass',·['../structVirtualSiteConfiguration.xhtml#a86c56dfa2a3ae3d2233025dd0211e6d4',·1,·'VirtualSiteConfiguration']]], |
990 | ····['dummyselection_5f_643',·['dummySelection_',·['../classgmx_1_1test_1_1ModuleTest.xhtml#a2cfbedd95ba40db846e9f764e1a1bcd7',·1,·'gmx::test::ModuleTest']]], | 990 | ····['dummyselection_5f_643',·['dummySelection_',·['../classgmx_1_1test_1_1ModuleTest.xhtml#a2cfbedd95ba40db846e9f764e1a1bcd7',·1,·'gmx::test::ModuleTest']]], |
991 | ····['dummytopology_5f_644',·['dummyTopology_',·['../classgmx_1_1test_1_1ModuleTest.xhtml#af0b4bb7693f875571daa0e8ae25156d3',·1,·'gmx::test::ModuleTest']]], | 991 | ····['dummytopology_5f_644',·['dummyTopology_',·['../classgmx_1_1test_1_1ModuleTest.xhtml#af0b4bb7693f875571daa0e8ae25156d3',·1,·'gmx::test::ModuleTest']]], |
992 | ····['dump_645',·['dump',·['../classgmx_1_1ReadCheckpointDataHolder.xhtml#aec87b8d67956c15834da54bd0737623a',·1,·'gmx::ReadCheckpointDataHolder']]], | 992 | ····['dump_645',·['dump',·['../classgmx_1_1ReadCheckpointDataHolder.xhtml#aec87b8d67956c15834da54bd0737623a',·1,·'gmx::ReadCheckpointDataHolder']]], |
993 | ····['dump_2ecpp_646',·['dump.cpp',·['../ | 993 | ····['dump_2ecpp_646',·['dump.cpp',·['../domdec_2dump_8cpp.xhtml',·1,·'(Global·Namespace)'], |
994 | ········['../domdec_2dump_8cpp.xhtml',·1,·'(Global·Namespace)'], | ||
995 | ········['../tools_2tests_2dump_8cpp.xhtml',·1,·'(Global·Namespace)'] | 994 | ········['../tools_2tests_2dump_8cpp.xhtml',·1,·'(Global·Namespace)'], |
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996 | ····]], | 996 | ····]], |
997 | ····['dump_2eh_647',·['dump.h',·['../domdec_2dump_8h.xhtml',·1,·'']]], | 997 | ····['dump_2eh_647',·['dump.h',·['../domdec_2dump_8h.xhtml',·1,·'']]], |
998 | ····['dump_5fconfs_648',·['dump_confs',·['../namespacegmx.xhtml#a44f3c2f294d726a6ffc41f0303f8a05e',·1,·'gmx']]], | 998 | ····['dump_5fconfs_648',·['dump_confs',·['../namespacegmx.xhtml#a44f3c2f294d726a6ffc41f0303f8a05e',·1,·'gmx']]], |
999 | ····['dump_5fpbc_649',·['dump_pbc',·['../pbc_8cpp.xhtml#a04742edf90899bcb8f2ece6c28d8c89e',·1,·'pbc.cpp']]], | 999 | ····['dump_5fpbc_649',·['dump_pbc',·['../pbc_8cpp.xhtml#a04742edf90899bcb8f2ece6c28d8c89e',·1,·'pbc.cpp']]], |
1000 | ····['dump_5ftmp_650',·['dump_tmp',·['../autocorr_8cpp.xhtml#a9674f8059c2757e6e40d1842fcaf7b45',·1,·'autocorr.cpp']]], | 1000 | ····['dump_5ftmp_650',·['dump_tmp',·['../autocorr_8cpp.xhtml#a9674f8059c2757e6e40d1842fcaf7b45',·1,·'autocorr.cpp']]], |
1001 | ····['dumpkeyvaluetree_651',·['dumpKeyValueTree',·['../group__module__utility.xhtml#ga58d8eb0b9eaeda93709f534a9387c110',·1,·'gmx']]], | 1001 | ····['dumpkeyvaluetree_651',·['dumpKeyValueTree',·['../group__module__utility.xhtml#ga58d8eb0b9eaeda93709f534a9387c110',·1,·'gmx']]], |
1002 | ····['duplicatesymtab_652',·['duplicatesymtab',·['../symtab_8h.xhtml#a7a219947903b65355a4a3b5ab00079b4',·1,·'duplicateSymtab(const·t_symtab·*symtab): symtab.cpp'], | 1002 | ····['duplicatesymtab_652',·['duplicatesymtab',·['../symtab_8h.xhtml#a7a219947903b65355a4a3b5ab00079b4',·1,·'duplicateSymtab(const·t_symtab·*symtab): symtab.cpp'], |
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168 | ····['elementnotfounderror_140',·['elementnotfounderror',·['../group__module__modularsimulator.xhtml#gaf0f3de7e253d0e4605a7280479534878',·1,·'gmx::ElementNotFoundError::ElementNotFoundError()'], | 168 | ····['elementnotfounderror_140',·['elementnotfounderror',·['../group__module__modularsimulator.xhtml#gaf0f3de7e253d0e4605a7280479534878',·1,·'gmx::ElementNotFoundError::ElementNotFoundError()'], |
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170 | ····]], | 170 | ····]], |
171 | ····['elements_141',·['elements',·['../page_module_selection_parser.xhtml#selparser_tree_arith',·1,·'Arithmetic·elements'], | 171 | ····['elements_141',·['elements',·['../page_module_selection_parser.xhtml#selparser_tree_arith',·1,·'Arithmetic·elements'], |
172 | ········['../page_module_selection_compiler.xhtml#selcompiler_tree_arith',·1,·'Arithmetic·elements'], | 172 | ········['../page_module_selection_compiler.xhtml#selcompiler_tree_arith',·1,·'Arithmetic·elements'], |
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176 | ········['../page_module_selection_compiler.xhtml#selcompiler_tree_const',·1,·'Constant·elements'], | ||
177 | ········['../classgmx_1_1KeyValueTreePath.xhtml#a1d86be1f4183f54eb6783f04b4a4e4fa',·1,·'gmx::KeyValueTreePath::elements()'], | 177 | ········['../classgmx_1_1KeyValueTreePath.xhtml#a1d86be1f4183f54eb6783f04b4a4e4fa',·1,·'gmx::KeyValueTreePath::elements()'], |
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194 | ········['../classgmx_1_1ForceElement.xhtml#a6098b4a1af32107789c511a53e7175fa',·1,·'gmx::ForceElement::elementSetup()'], | 193 | ········['../classgmx_1_1ForceElement.xhtml#a6098b4a1af32107789c511a53e7175fa',·1,·'gmx::ForceElement::elementSetup()'], |
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195 | ········['../classgmx_1_1FirstOrderPressureCoupling.xhtml#aa565438c831b5b43abc9109485de253a',·1,·'gmx::FirstOrderPressureCoupling::elementSetup()'], | 195 | ········['../classgmx_1_1FirstOrderPressureCoupling.xhtml#aa565438c831b5b43abc9109485de253a',·1,·'gmx::FirstOrderPressureCoupling::elementSetup()'], |
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197 | ········['../classgmx_1_1EnergyData_1_1Element.xhtml#abaa46df5d89a2ef04b4bd1ca5e84f2fc',·1,·'gmx::EnergyData::Element::elementSetup()'], | ||
197 | ········['../classgmx_1_1Propagator.xhtml#a8f15ffd22796fb0163d378cf57c36af7',·1,·'gmx::Propagator::elementSetup()'], | 198 | ········['../classgmx_1_1Propagator.xhtml#a8f15ffd22796fb0163d378cf57c36af7',·1,·'gmx::Propagator::elementSetup()'], |
198 | ········['../classgmx_1_1ConstraintsElement.xhtml#a49afd5b53ba3b039418a0ea819f716b2',·1,·'gmx::ConstraintsElement::elementSetup()'], | 199 | ········['../classgmx_1_1ConstraintsElement.xhtml#a49afd5b53ba3b039418a0ea819f716b2',·1,·'gmx::ConstraintsElement::elementSetup()'], |
199 | ········['../classgmx_1_1ComputeGlobalsElement.xhtml#a4b1fd8c1465717da2722f7d16101f7e4',·1,·'gmx::ComputeGlobalsElement::elementSetup()'], | ||
200 | ········['../classgmx_1_1PullElement.xhtml#a1a4c6732f9978f57b96c25347c99c430',·1,·'gmx::PullElement::elementSetup()'], | ||
201 | ········['../classgmx_1_1CompositeSimulatorElement.xhtml#a0eff43f3fe568005c9b4ad091f7c4dfb',·1,·'gmx::CompositeSimulatorElement::elementSetup()'], | 200 | ········['../classgmx_1_1CompositeSimulatorElement.xhtml#a0eff43f3fe568005c9b4ad091f7c4dfb',·1,·'gmx::CompositeSimulatorElement::elementSetup()'], |
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202 | ········['../classgmx_1_1CheckpointHelper.xhtml#a3ac29c9efb5ce4e05c3eeeb9b69f206a',·1,·'gmx::CheckpointHelper::elementSetup()'], | 202 | ········['../classgmx_1_1CheckpointHelper.xhtml#a3ac29c9efb5ce4e05c3eeeb9b69f206a',·1,·'gmx::CheckpointHelper::elementSetup()'], |
203 | ········['../classgmx_1_1AndersenTemperatureCoupling.xhtml#a7b96d57ae600c389e24dd1567b19fa59',·1,·'gmx::AndersenTemperatureCoupling::elementSetup()'], | 203 | ········['../classgmx_1_1AndersenTemperatureCoupling.xhtml#a7b96d57ae600c389e24dd1567b19fa59',·1,·'gmx::AndersenTemperatureCoupling::elementSetup()'], |
204 | ········['../classgmx_1_1StatePropagatorData_1_1Element.xhtml#a17de7b51fbe3ebe86b9579536e357eb3',·1,·'gmx::StatePropagatorData::Element::elementSetup()'], | 204 | ········['../classgmx_1_1StatePropagatorData_1_1Element.xhtml#a17de7b51fbe3ebe86b9579536e357eb3',·1,·'gmx::StatePropagatorData::Element::elementSetup()'], |
205 | ········['../classgmx_1_1TrajectoryElement.xhtml#abe4f98650f14b2b0075bf3f79b622514',·1,·'gmx::TrajectoryElement::elementSetup()'], | 205 | ········['../classgmx_1_1TrajectoryElement.xhtml#abe4f98650f14b2b0075bf3f79b622514',·1,·'gmx::TrajectoryElement::elementSetup()'], |
206 | ········['../classgmx_1_1VelocityScalingTemperatureCoupling.xhtml#ad300b2c72fc81216cc38bd4598308452',·1,·'gmx::VelocityScalingTemperatureCoupling::elementSetup()'] | 206 | ········['../classgmx_1_1VelocityScalingTemperatureCoupling.xhtml#ad300b2c72fc81216cc38bd4598308452',·1,·'gmx::VelocityScalingTemperatureCoupling::elementSetup()'] |
207 | ····]], | 207 | ····]], |
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209 | ···· | 210 | ········['../classgmx_1_1TrajectoryElement.xhtml#acd922303352fccf31d119134f3788c53',·1,·'gmx::TrajectoryElement::elementTeardown()'], |
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214 | ········['../classgmx_1_1Propagator.xhtml#a9b683610f0f9a0ed38bc8990a445114b',·1,·'gmx::Propagator::elementTeardown()'], | 214 | ········['../classgmx_1_1Propagator.xhtml#a9b683610f0f9a0ed38bc8990a445114b',·1,·'gmx::Propagator::elementTeardown()'], |
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216 | ········['../classgmx_1_1NoseHooverChainsElement.xhtml#a76fcb3e27a964b269535dd0df48c0d9e',·1,·'gmx::NoseHooverChainsElement::elementTeardown()'], | 216 | ········['../classgmx_1_1NoseHooverChainsElement.xhtml#a76fcb3e27a964b269535dd0df48c0d9e',·1,·'gmx::NoseHooverChainsElement::elementTeardown()'], |
217 | ········['../classgmx_1_1MttkBoxScaling.xhtml#a119a100fb779b486cb1333ff53039ab4',·1,·'gmx::MttkBoxScaling::elementTeardown()'], | 217 | ········['../classgmx_1_1MttkBoxScaling.xhtml#a119a100fb779b486cb1333ff53039ab4',·1,·'gmx::MttkBoxScaling::elementTeardown()'], |
218 | ········['../classgmx_1_1MttkElement.xhtml#a1c9cb4e9c8c96b80e10e448daa18d98f',·1,·'gmx::MttkElement::elementTeardown()'], | 218 | ········['../classgmx_1_1MttkElement.xhtml#a1c9cb4e9c8c96b80e10e448daa18d98f',·1,·'gmx::MttkElement::elementTeardown()'], |
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296 | ········['../group__module__utility.xhtml#gaa1e33d963e2538664428c8db95ca564e',·1,·'gmx::endsWith(const·std::string·&str,·const·char·*suffix)'], | 296 | ········['../group__module__utility.xhtml#gaa1e33d963e2538664428c8db95ca564e',·1,·'gmx::endsWith(const·std::string·&str,·const·char·*suffix)'], |
297 | ········['../group__module__utility.xhtml#ga8b22d1fd014cc09c9cf7c4c1615c0a1b',·1,·'gmx::endsWith(const·char·*str,·const·char·*suffix)'] | 297 | ········['../group__module__utility.xhtml#ga8b22d1fd014cc09c9cf7c4c1615c0a1b',·1,·'gmx::endsWith(const·char·*str,·const·char·*suffix)'] |
298 | ····]], | 298 | ····]], |
299 | ····['ener_5ffile_5fptr_179',·['ener_file_ptr',·['../namespacegmx_1_1test.xhtml#a0cf2e1e7224ea64c7762046eb635aaf7',·1,·'gmx::test']]], | 299 | ····['ener_5ffile_5fptr_179',·['ener_file_ptr',·['../namespacegmx_1_1test.xhtml#a0cf2e1e7224ea64c7762046eb635aaf7',·1,·'gmx::test']]], |
300 | ····['enerd_180',·['enerd',·['../classgmx_1_1ImdSession_1_1Impl.xhtml#a83462cc2d6b109c54ec0cdbfc9e3a8a1',·1,·'gmx::ImdSession::Impl::enerd'], | 300 | ····['enerd_180',·['enerd',·['../classgmx_1_1ImdSession_1_1Impl.xhtml#a83462cc2d6b109c54ec0cdbfc9e3a8a1',·1,·'gmx::ImdSession::Impl::enerd'], |
301 | ········['../classanonymous__namespace_02minimize_8cpp_03_1_1EnergyEvaluator.xhtml#aeab7e09583e2548fcad4ad6da7ca3f44',·1,·'anonymous_namespace{minimize.cpp}::EnergyEvaluator::enerd'] | 301 | ········['../classanonymous__namespace_02minimize_8cpp_03_1_1EnergyEvaluator.xhtml#aeab7e09583e2548fcad4ad6da7ca3f44',·1,·'anonymous_namespace{minimize.cpp}::EnergyEvaluator::enerd'] |
302 | ····]], | 302 | ····]], |
303 | ····['enerd_5f_181',·['enerd_',·['../classgmx_1_1ForceProviderOutput.xhtml#a3e5d000f356115dc346c471eeac73932',·1,·'gmx::ForceProviderOutput::enerd_'], | ||
304 | ····· | 303 | ····['enerd_5f_181',·['enerd_',·['../classgmx_1_1LegacySimulatorData.xhtml#a4901f0e36e8dfe004872229cd1b17dd3',·1,·'gmx::LegacySimulatorData::enerd_'], |
304 | ········['../classgmx_1_1ForceProviderOutput.xhtml#a3e5d000f356115dc346c471eeac73932',·1,·'gmx::ForceProviderOutput::enerd_'] | ||
305 | ····]], | 305 | ····]], |
306 | ····['enerdata_182',·['enerdata',·['../classgmx_1_1EnergyData.xhtml#af5ff3635bcb4d7ecb90c7505f70ff2d9',·1,·'gmx::EnergyData::enerdata()'], | 306 | ····['enerdata_182',·['enerdata',·['../classgmx_1_1EnergyData.xhtml#af5ff3635bcb4d7ecb90c7505f70ff2d9',·1,·'gmx::EnergyData::enerdata()'], |
307 | ········['../classgmx_1_1EnergyData.xhtml#a8253678c958de422aabdc634405276ca',·1,·'gmx::EnergyData::enerdata()·const'] | 307 | ········['../classgmx_1_1EnergyData.xhtml#a8253678c958de422aabdc634405276ca',·1,·'gmx::EnergyData::enerdata()·const'] |
308 | ····]], | 308 | ····]], |
309 | ····['enerdata_2ecpp_183',·['enerdata.cpp',·['../enerdata_8cpp.xhtml',·1,·'']]], | 309 | ····['enerdata_2ecpp_183',·['enerdata.cpp',·['../enerdata_8cpp.xhtml',·1,·'']]], |
310 | ····['enerdata_5f_184',·['enerdata_',·['../classgmx_1_1test_1_1anonymous__namespace_02energyoutput_8cpp_03_1_1EnergyOutputTest.xhtml#a178388e022bfe1f8dad4cc34a318ae9d',·1,·'gmx::test::anonymous_namespace{energyoutput.cpp}::EnergyOutputTest']]], | 310 | ····['enerdata_5f_184',·['enerdata_',·['../classgmx_1_1test_1_1anonymous__namespace_02energyoutput_8cpp_03_1_1EnergyOutputTest.xhtml#a178388e022bfe1f8dad4cc34a318ae9d',·1,·'gmx::test::anonymous_namespace{energyoutput.cpp}::EnergyOutputTest']]], |
311 | ····['enerdata_5fp_185',·['enerdata_p',·['../structgmx_1_1SimulatorStateData.xhtml#a44621b372fa324a71ad5d4791f55e561',·1,·'gmx::SimulatorStateData']]], | 311 | ····['enerdata_5fp_185',·['enerdata_p',·['../structgmx_1_1SimulatorStateData.xhtml#a44621b372fa324a71ad5d4791f55e561',·1,·'gmx::SimulatorStateData']]], |
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337 | ····['energycomparison_198',·['energycomparison',·['../classgmx_1_1test_1_1EnergyComparison.xhtml',·1,·'gmx::test::EnergyComparison'], | 337 | ····['energycomparison_198',·['energycomparison',·['../classgmx_1_1test_1_1EnergyComparison.xhtml',·1,·'gmx::test::EnergyComparison'], |
338 | ········['../classgmx_1_1test_1_1EnergyComparison.xhtml#aafb2df8ef9a36c6a3cffc8ac57cf2645',·1,·'gmx::test::EnergyComparison::EnergyComparison()'] | 338 | ········['../classgmx_1_1test_1_1EnergyComparison.xhtml#aafb2df8ef9a36c6a3cffc8ac57cf2645',·1,·'gmx::test::EnergyComparison::EnergyComparison()'] |
339 | ····]], | 339 | ····]], |
340 | ····['energycomparison_2ecpp_199',·['energycomparison.cpp',·['../energycomparison_8cpp.xhtml',·1,·'']]], | 340 | ····['energycomparison_2ecpp_199',·['energycomparison.cpp',·['../energycomparison_8cpp.xhtml',·1,·'']]], |
341 | ····['energycomparison_2eh_200',·['energycomparison.h',·['../energycomparison_8h.xhtml',·1,·'']]], | 341 | ····['energycomparison_2eh_200',·['energycomparison.h',·['../energycomparison_8h.xhtml',·1,·'']]], |
342 | ····['energycomparison_5f_201',·['energyComparison_',·['../classgmx_1_1test_1_1PeriodicActionsTest.xhtml#accffb92e7241f0a2b319173bcc6e239a',·1,·'gmx::test::PeriodicActionsTest']]], | 342 | ····['energycomparison_5f_201',·['energyComparison_',·['../classgmx_1_1test_1_1PeriodicActionsTest.xhtml#accffb92e7241f0a2b319173bcc6e239a',·1,·'gmx::test::PeriodicActionsTest']]], |
343 | ····['energycontribution_202',·['EnergyContribution',·['../namespacegmx.xhtml#a41036212ab3b994374d2c2f02772427c',·1,·'gmx']]], | 343 | ····['energycontribution_202',·['EnergyContribution',·['../namespacegmx.xhtml#a41036212ab3b994374d2c2f02772427c',·1,·'gmx']]], |
344 | ····['energydata_203',·['energydata',·['../classgmx_1_1EnergyData.xhtml',·1,·'gmx::EnergyData'], | ||
344 | ···· | 345 | ········['../classgmx_1_1EnergyData.xhtml#a15119585f028d3e0501e51fd4ab690b2',·1,·'gmx::EnergyData::EnergyData()'] |
345 | ········['../classgmx_1_1EnergyData.xhtml',·1,·'gmx::EnergyData'] | ||
346 | ····]], | 346 | ····]], |
347 | ····['energydata_20tt_204',·['<tt>EnergyData</tt>',·['../page_modularsimulator.xhtml#autotoc_md36',·1,·'']]], | 347 | ····['energydata_20tt_204',·['<tt>EnergyData</tt>',·['../page_modularsimulator.xhtml#autotoc_md36',·1,·'']]], |
348 | ····['energydata_2ecpp_205',·['energydata.cpp',·['../energydata_8cpp.xhtml',·1,·'']]], | 348 | ····['energydata_2ecpp_205',·['energydata.cpp',·['../energydata_8cpp.xhtml',·1,·'']]], |
349 | ····['energydata_2eh_206',·['energydata.h',·['../energydata_8h.xhtml',·1,·'']]], | 349 | ····['energydata_2eh_206',·['energydata.h',·['../energydata_8h.xhtml',·1,·'']]], |
350 | ····['energydata_3a_3aelement_20tt_207',·['<tt>EnergyData::Element</tt>',·['../page_modularsimulator.xhtml#autotoc_md32',·1,·'']]], | 350 | ····['energydata_3a_3aelement_20tt_207',·['<tt>EnergyData::Element</tt>',·['../page_modularsimulator.xhtml#autotoc_md32',·1,·'']]], |
351 | ····['energydrift_208',·['energyDrift',·['../classgmx_1_1EnergyDriftTracker.xhtml#af7dcf448940396b29c3ffb9e935fee66',·1,·'gmx::EnergyDriftTracker']]], | 351 | ····['energydrift_208',·['energyDrift',·['../classgmx_1_1EnergyDriftTracker.xhtml#af7dcf448940396b29c3ffb9e935fee66',·1,·'gmx::EnergyDriftTracker']]], |
352 | ····['energydriftstring_209',·['energyDriftString',·['../classgmx_1_1EnergyDriftTracker.xhtml#ae353361ca2765e1c7655c1862fb49723',·1,·'gmx::EnergyDriftTracker']]], | 352 | ····['energydriftstring_209',·['energyDriftString',·['../classgmx_1_1EnergyDriftTracker.xhtml#ae353361ca2765e1c7655c1862fb49723',·1,·'gmx::EnergyDriftTracker']]], |
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912 | ····['expfit_2eh_555',·['expfit.h',·['../expfit_8h.xhtml',·1,·'']]], | 912 | ····['expfit_2eh_555',·['expfit.h',·['../expfit_8h.xhtml',·1,·'']]], |
913 | ····['exponentialdistribution_556',·['exponentialdistribution',·['../classgmx_1_1ExponentialDistribution.xhtml#a5343846298b8a4472dca16925ecfea72',·1,·'gmx::ExponentialDistribution::ExponentialDistribution(result_type·lambda=1.0)'], | 913 | ····['exponentialdistribution_556',·['exponentialdistribution',·['../classgmx_1_1ExponentialDistribution.xhtml#a5343846298b8a4472dca16925ecfea72',·1,·'gmx::ExponentialDistribution::ExponentialDistribution(result_type·lambda=1.0)'], |
914 | ········['../classgmx_1_1ExponentialDistribution.xhtml#ac05671078f935d10e725ea3a28e97892',·1,·'gmx::ExponentialDistribution::ExponentialDistribution(const·param_type·&param)'], | 914 | ········['../classgmx_1_1ExponentialDistribution.xhtml#ac05671078f935d10e725ea3a28e97892',·1,·'gmx::ExponentialDistribution::ExponentialDistribution(const·param_type·&param)'], |
915 | ········['../classgmx_1_1ExponentialDistribution.xhtml',·1,·'gmx::ExponentialDistribution<·RealType·>'] | 915 | ········['../classgmx_1_1ExponentialDistribution.xhtml',·1,·'gmx::ExponentialDistribution<·RealType·>'] |
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919 | ····['exponentialmovingaverage_559',·['exponentialmovingaverage',·['../classgmx_1_1ExponentialMovingAverage.xhtml',·1,·'gmx::ExponentialMovingAverage'], | 919 | ····['exponentialmovingaverage_559',·['exponentialmovingaverage',·['../classgmx_1_1ExponentialMovingAverage.xhtml#a2c184672771f47615b67e3b72dd79423',·1,·'gmx::ExponentialMovingAverage::ExponentialMovingAverage()'], |
920 | ········['../classgmx_1_1ExponentialMovingAverage.xhtml | 920 | ········['../classgmx_1_1ExponentialMovingAverage.xhtml',·1,·'gmx::ExponentialMovingAverage'] |
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923 | ········['../ | 923 | ········['../exponentialmovingaverage_8cpp.xhtml',·1,·'(Global·Namespace)'] |
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926 | ····['exponentialmovingaveragestate_562',·['ExponentialMovingAverageState',·['../structgmx_1_1ExponentialMovingAverageState.xhtml',·1,·'gmx']]], | 926 | ····['exponentialmovingaveragestate_562',·['ExponentialMovingAverageState',·['../structgmx_1_1ExponentialMovingAverageState.xhtml',·1,·'gmx']]], |
927 | ····['exponentialmovingaveragestate_5f_563',·['exponentialMovingAverageState_',·['../structgmx_1_1DensityFittingForceProviderState.xhtml#a6f14bf9ea662f145cfa4cfc01b15bb97',·1,·'gmx::DensityFittingForceProviderState']]], | 927 | ····['exponentialmovingaveragestate_5f_563',·['exponentialMovingAverageState_',·['../structgmx_1_1DensityFittingForceProviderState.xhtml#a6f14bf9ea662f145cfa4cfc01b15bb97',·1,·'gmx::DensityFittingForceProviderState']]], |
928 | ····['exponentialmovingaveragestateaskeyvaluetree_564',·['exponentialMovingAverageStateAsKeyValueTree',·['../namespacegmx.xhtml#a4fb56f226b415783122e3717d943e47e',·1,·'gmx']]], | 928 | ····['exponentialmovingaveragestateaskeyvaluetree_564',·['exponentialMovingAverageStateAsKeyValueTree',·['../namespacegmx.xhtml#a4fb56f226b415783122e3717d943e47e',·1,·'gmx']]], |
929 | ····['exponentialmovingaveragestatefromkeyvaluetree_565',·['exponentialMovingAverageStateFromKeyValueTree',·['../namespacegmx.xhtml#a89ca8039bafc56d60c8bbce0d33960ae',·1,·'gmx']]], | 929 | ····['exponentialmovingaveragestatefromkeyvaluetree_565',·['exponentialMovingAverageStateFromKeyValueTree',·['../namespacegmx.xhtml#a89ca8039bafc56d60c8bbce0d33960ae',·1,·'gmx']]], |
930 | ····['exponentialmovingaveragestatename_5f_566',·['exponentialMovingAverageStateName_',·['../structgmx_1_1DensityFittingForceProviderState.xhtml#ad2650124e0f716fd6c9119f7d72efe0e',·1,·'gmx::DensityFittingForceProviderState']]], | 930 | ····['exponentialmovingaveragestatename_5f_566',·['exponentialMovingAverageStateName_',·['../structgmx_1_1DensityFittingForceProviderState.xhtml#ad2650124e0f716fd6c9119f7d72efe0e',·1,·'gmx::DensityFittingForceProviderState']]], |
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5 | ········['../classgmx_1_1TrajectoryFrame.xhtml#aeb11fb31dd45d8a3167c8a1f3db917ee',·1,·'gmx::TrajectoryFrame::f()'], | 3 | ········['../classgmx_1_1TrajectoryFrame.xhtml#aeb11fb31dd45d8a3167c8a1f3db917ee',·1,·'gmx::TrajectoryFrame::f()'], |
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9 | ········['../structgmx_1_1test_1_1anonymous__namespace_02leapfrog_8cpp_03_1_1LeapFrogTestParameters.xhtml#a51116a387cf09088f366f4dba556acb7',·1,·'gmx::test::anonymous_namespace{leapfrog.cpp}::LeapFrogTestParameters::f'], | 11 | ········['../structgmx_1_1test_1_1anonymous__namespace_02leapfrog_8cpp_03_1_1LeapFrogTestParameters.xhtml#a51116a387cf09088f366f4dba556acb7',·1,·'gmx::test::anonymous_namespace{leapfrog.cpp}::LeapFrogTestParameters::f'], |
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13 | ········['../structgmx_1_1test_1_1anonymous__namespace_02bonded_8cpp_03_1_1OutputQuantities.xhtml#a19f390325ead8081d3d9ac186423f093',·1,·'gmx::test::anonymous_namespace{bonded.cpp}::OutputQuantities::f'] | ||
11 | ········['../classgmx_1_1ImdSession_1_1Impl.xhtml#a3944dd08a0c5716ebd0691fbfb66d6a9',·1,·'gmx::ImdSession::Impl::f'], | ||
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15 | ····['f_5find_1',·['f_ind',·['../classgmx_1_1ImdSession_1_1Impl.xhtml#ac4bf850f3fc3b86d4dd7d95e34fe37e0',·1,·'gmx::ImdSession::Impl']]], | 15 | ····['f_5find_1',·['f_ind',·['../classgmx_1_1ImdSession_1_1Impl.xhtml#ac4bf850f3fc3b86d4dd7d95e34fe37e0',·1,·'gmx::ImdSession::Impl']]], |
16 | ····['f_5frot_5floc_2',·['f_rot_loc',·['../structgmx__enfrotgrp.xhtml#a7315a01f64703f5b8fc100d76f6a6588',·1,·'gmx_enfrotgrp']]], | 16 | ····['f_5frot_5floc_2',·['f_rot_loc',·['../structgmx__enfrotgrp.xhtml#a7315a01f64703f5b8fc100d76f6a6588',·1,·'gmx_enfrotgrp']]], |
17 | ····['factorize_3',·['factorize',·['../domdec__setup_8cpp.xhtml#a16e508bed9b154f301b87efa8a1ab1f4',·1,·'domdec_setup.cpp']]], | 17 | ····['factorize_3',·['factorize',·['../domdec__setup_8cpp.xhtml#a16e508bed9b154f301b87efa8a1ab1f4',·1,·'domdec_setup.cpp']]], |
18 | ····['factorymethod_4',·['FactoryMethod',·['../classgmx_1_1ICommandLineOptionsModule.xhtml#a600f22ce0fca3bca1aaf672395e4778e',·1,·'gmx::ICommandLineOptionsModule']]], | 18 | ····['factorymethod_4',·['FactoryMethod',·['../classgmx_1_1ICommandLineOptionsModule.xhtml#a600f22ce0fca3bca1aaf672395e4778e',·1,·'gmx::ICommandLineOptionsModule']]], |
19 | ····['fakempiallreduce_5',·['fakeMpiAllReduce',·['../classgmx_1_1test_1_1anonymous__namespace_02observablesreducer_8cpp_03_1_1ObservablesReducerIntegrationTest.xhtml#a9cf04ab11fa748eb8fa5bae03a6e8047',·1,·'gmx::test::anonymous_namespace{observablesreducer.cpp}::ObservablesReducerIntegrationTest']]], | 19 | ····['fakempiallreduce_5',·['fakeMpiAllReduce',·['../classgmx_1_1test_1_1anonymous__namespace_02observablesreducer_8cpp_03_1_1ObservablesReducerIntegrationTest.xhtml#a9cf04ab11fa748eb8fa5bae03a6e8047',·1,·'gmx::test::anonymous_namespace{observablesreducer.cpp}::ObservablesReducerIntegrationTest']]], |
20 | ····['false_6',·['FALSE',·['../basedefinitions_8h.xhtml#aa93f0eb578d23995850d61f7d61c55c1',·1,·'basedefinitions.h']]], | 20 | ····['false_6',·['FALSE',·['../basedefinitions_8h.xhtml#aa93f0eb578d23995850d61f7d61c55c1',·1,·'basedefinitions.h']]], |
Offset 35, 34 lines modified | Offset 35, 34 lines modified | ||
35 | ····['fcoords_17',·['FCoords',·['../namespacegmx.xhtml#aa72f45c17038ea5aae00ba6b17cab901a3450af452b893d21b872bbf8683b7df8',·1,·'gmx']]], | 35 | ····['fcoords_17',·['FCoords',·['../namespacegmx.xhtml#aa72f45c17038ea5aae00ba6b17cab901a3450af452b893d21b872bbf8683b7df8',·1,·'gmx']]], |
36 | ····['feature_18',·['feature',·['../classgmx_1_1CpuInfo.xhtml#ac8981fb299411577dccba90b335a9085',·1,·'gmx::CpuInfo::Feature'], | 36 | ····['feature_18',·['feature',·['../classgmx_1_1CpuInfo.xhtml#ac8981fb299411577dccba90b335a9085',·1,·'gmx::CpuInfo::Feature'], |
37 | ········['../classgmx_1_1CpuInfo.xhtml#a634410a544ba8fb20dfd94f53e7cb27f',·1,·'gmx::CpuInfo::feature(Feature·f)·const'] | 37 | ········['../classgmx_1_1CpuInfo.xhtml#a634410a544ba8fb20dfd94f53e7cb27f',·1,·'gmx::CpuInfo::feature(Feature·f)·const'] |
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40 | ····['featureset_20',·['featureSet',·['../classgmx_1_1CpuInfo.xhtml#ac826abf4d614f73e5d8c7d2958ce30e6',·1,·'gmx::CpuInfo']]], | 40 | ····['featureset_20',·['featureSet',·['../classgmx_1_1CpuInfo.xhtml#ac826abf4d614f73e5d8c7d2958ce30e6',·1,·'gmx::CpuInfo']]], |
41 | ····['featurestring_21',·['featureString',·['../classgmx_1_1CpuInfo.xhtml#a261a17115d44f8e4e866ec920da62b67',·1,·'gmx::CpuInfo']]], | 41 | ····['featurestring_21',·['featureString',·['../classgmx_1_1CpuInfo.xhtml#a261a17115d44f8e4e866ec920da62b67',·1,·'gmx::CpuInfo']]], |
42 | ····['fep_22',·['fep',·['../structgmx_1_1test_1_1anonymous__namespace_02pairs_8cpp_03_1_1ListInput.xhtml#a3984084d8090abf3c5b0805c5ff7ca9e',·1,·'gmx::test::anonymous_namespace{pairs.cpp}::ListInput::fep'], | ||
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49 | ····['fep_5fstate_5fb_25',·['FEP_STATE_B',·['../pme__gpu__internal_8h.xhtml#ae6dd68494c14b66f86ff58a5e0a1aa93',·1,·'pme_gpu_internal.h']]], | 49 | ····['fep_5fstate_5fb_25',·['FEP_STATE_B',·['../pme__gpu__internal_8h.xhtml#ae6dd68494c14b66f86ff58a5e0a1aa93',·1,·'pme_gpu_internal.h']]], |
50 | ····['fepbits_26',·['fepBits',·['../classNbnxm_1_1Grid.xhtml#aca022470760db2366778f8df87e42279',·1,·'Nbnxm::Grid']]], | 50 | ····['fepbits_26',·['fepBits',·['../classNbnxm_1_1Grid.xhtml#aca022470760db2366778f8df87e42279',·1,·'Nbnxm::Grid']]], |
51 | ····['fepdimparams_27',·['fepdimparams',·['../structgmx_1_1DimParams_1_1FepDimParams.xhtml',·1,·'gmx::DimParams::FepDimParams'], | ||
52 | ····· | 51 | ····['fepdimparams_27',·['fepdimparams',·['../structgmx_1_1DimParams.xhtml#aaddac033528c91ab831c36981ad0bf12',·1,·'gmx::DimParams::fepDimParams()·const'], |
52 | ········['../structgmx_1_1DimParams_1_1FepDimParams.xhtml',·1,·'gmx::DimParams::FepDimParams'] | ||
53 | ····]], | 53 | ····]], |
54 | ····['feplambdadimparams_28',·['fepLambdaDimParams',·['../structgmx_1_1DimParams.xhtml#a7dc64a12c8e1081550e64f355b5a0682',·1,·'gmx::DimParams']]], | 54 | ····['feplambdadimparams_28',·['fepLambdaDimParams',·['../structgmx_1_1DimParams.xhtml#a7dc64a12c8e1081550e64f355b5a0682',·1,·'gmx::DimParams']]], |
55 | ····['feplambdastate_29',·['fepLambdaState',·['../classgmx_1_1Awh.xhtml#adfc3a70dde1b72c20abe5688cf98d4ba',·1,·'gmx::Awh']]], | 55 | ····['feplambdastate_29',·['fepLambdaState',·['../classgmx_1_1Awh.xhtml#adfc3a70dde1b72c20abe5688cf98d4ba',·1,·'gmx::Awh']]], |
56 | ····['feplists_30',·['fepLists',·['../classPairlistSet.xhtml#a8ffe01f1e7b00537e05273e79afd8d7a',·1,·'PairlistSet']]], | 56 | ····['feplists_30',·['fepLists',·['../classPairlistSet.xhtml#a8ffe01f1e7b00537e05273e79afd8d7a',·1,·'PairlistSet']]], |
57 | ····['fepstatesetting_31',·['FepStateSetting',·['../classgmx_1_1FepStateSetting.xhtml',·1,·'gmx']]], | 57 | ····['fepstatesetting_31',·['FepStateSetting',·['../classgmx_1_1FepStateSetting.xhtml',·1,·'gmx']]], |
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59 | ····· | 58 | ····['fepstatevalue_32',·['fepstatevalue',·['../structFEPStateValue.xhtml#a638b5206f78383252ae56f4a257fb922',·1,·'FEPStateValue::FEPStateValue()=default'], |
60 | ········['../structFEPStateValue.xhtml#ae45c0dca25a0b1b48a68c10767d59483',·1,·'FEPStateValue::FEPStateValue(T·value)'], | 59 | ········['../structFEPStateValue.xhtml#ae45c0dca25a0b1b48a68c10767d59483',·1,·'FEPStateValue::FEPStateValue(T·value)'], |
61 | ········['../structFEPStateValue.xhtml#ad203d2ae99649841dd5ecd72f015167a',·1,·'FEPStateValue::FEPStateValue(T·valueA,·T·valueB)'] | 60 | ········['../structFEPStateValue.xhtml#ad203d2ae99649841dd5ecd72f015167a',·1,·'FEPStateValue::FEPStateValue(T·valueA,·T·valueB)'], |
61 | ········['../structFEPStateValue.xhtml',·1,·'FEPStateValue<·T·>'] | ||
62 | ····]], | 62 | ····]], |
63 | ····['fepstatevalue_3c_20nameholder_20_3e_33',·['FEPStateValue<·NameHolder·>',·['../structFEPStateValue.xhtml',·1,·'']]], | 63 | ····['fepstatevalue_3c_20nameholder_20_3e_33',·['FEPStateValue<·NameHolder·>',·['../structFEPStateValue.xhtml',·1,·'']]], |
64 | ····['fepstatevalue_3c_20real_20_3e_34',·['FEPStateValue<·real·>',·['../structFEPStateValue.xhtml',·1,·'']]], | 64 | ····['fepstatevalue_3c_20real_20_3e_34',·['FEPStateValue<·real·>',·['../structFEPStateValue.xhtml',·1,·'']]], |
65 | ····['fepstatevalue_3c_20unsigned_20short_20_3e_35',·['FEPStateValue<·unsigned·short·>',·['../structFEPStateValue.xhtml',·1,·'']]], | 65 | ····['fepstatevalue_3c_20unsigned_20short_20_3e_35',·['FEPStateValue<·unsigned·short·>',·['../structFEPStateValue.xhtml',·1,·'']]], |
66 | ····['fetchnextevent_36',·['fetchnextevent',·['../classGpuRegionTimerImpl.xhtml#ace9b9965e5b0dec64d5d74af36035a63',·1,·'GpuRegionTimerImpl::fetchNextEvent()'], | 66 | ····['fetchnextevent_36',·['fetchnextevent',·['../classGpuRegionTimerImpl.xhtml#ace9b9965e5b0dec64d5d74af36035a63',·1,·'GpuRegionTimerImpl::fetchNextEvent()'], |
67 | ········['../classGpuRegionTimerWrapper.xhtml#ae595ce381d09845166643647caf6b539',·1,·'GpuRegionTimerWrapper::fetchNextEvent()'] | 67 | ········['../classGpuRegionTimerWrapper.xhtml#ae595ce381d09845166643647caf6b539',·1,·'GpuRegionTimerWrapper::fetchNextEvent()'] |
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88 | ····['fftbackend_56',·['FftBackend',·['../namespacegmx.xhtml#aad56f475765c1a78ee7f33e143e717bb',·1,·'gmx']]], | 88 | ····['fftbackend_56',·['FftBackend',·['../namespacegmx.xhtml#aad56f475765c1a78ee7f33e143e717bb',·1,·'gmx']]], |
89 | ····['fftdirection_57',·['FftDirection',·['../namespacegmx_1_1anonymous__namespace_02gpu__3dfft__sycl__rocfft_8cpp_03.xhtml#a189bb9a27ad84c1c5ba745b4611b07a9',·1,·'gmx::anonymous_namespace{gpu_3dfft_sycl_rocfft.cpp}']]], | 89 | ····['fftdirection_57',·['FftDirection',·['../namespacegmx_1_1anonymous__namespace_02gpu__3dfft__sycl__rocfft_8cpp_03.xhtml#a189bb9a27ad84c1c5ba745b4611b07a9',·1,·'gmx::anonymous_namespace{gpu_3dfft_sycl_rocfft.cpp}']]], |
90 | ····['fftsetup_58',·['fftSetup',·['../structPmeGpuSpecific.xhtml#aad82d2b99a94ed427226076d786a5886',·1,·'PmeGpuSpecific']]], | 90 | ····['fftsetup_58',·['fftSetup',·['../structPmeGpuSpecific.xhtml#aad82d2b99a94ed427226076d786a5886',·1,·'PmeGpuSpecific']]], |
91 | ····['ffwrite_59',·['ffWRITE',·['../group__module__commandline.xhtml#ga7631b25f5be9959c84dd7acc96bc04dd',·1,·'filenm.h']]], | 91 | ····['ffwrite_59',·['ffWRITE',·['../group__module__commandline.xhtml#ga7631b25f5be9959c84dd7acc96bc04dd',·1,·'filenm.h']]], |
92 | ····['ffwrmult_60',·['ffWRMULT',·['../group__module__commandline.xhtml#ga0a9ba9e80fcdc4a36537189bf0b2e092',·1,·'filenm.h']]], | 92 | ····['ffwrmult_60',·['ffWRMULT',·['../group__module__commandline.xhtml#ga0a9ba9e80fcdc4a36537189bf0b2e092',·1,·'filenm.h']]], |
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117 | ····['filemanager_74',·['fileManager',·['../classgmx_1_1test_1_1CommandLineTestBase.xhtml#a5899f9f12453f75da2a4af840a1c4b59',·1,·'gmx::test::CommandLineTestBase']]], | 117 | ····['filemanager_74',·['fileManager',·['../classgmx_1_1test_1_1CommandLineTestBase.xhtml#a5899f9f12453f75da2a4af840a1c4b59',·1,·'gmx::test::CommandLineTestBase']]], |
118 | ····['filemanager_5f_75',·['filemanager_',·['../classgmx_1_1test_1_1MultiSimTest.xhtml#a00ccab41b824db52825528838326ae91',·1,·'gmx::test::MultiSimTest::fileManager_'], | ||
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119 | ········['../classgmx_1_1test_1_1MultiSimTest.xhtml#a00ccab41b824db52825528838326ae91',·1,·'gmx::test::MultiSimTest::fileManager_'], | ||
120 | ········['../classgmx_1_1test_1_1anonymous__namespace_02energyoutput_8cpp_03_1_1EnergyOutputTest.xhtml#a6739c595dc4466b69220fdf1dfbe3d71',·1,·'gmx::test::anonymous_namespace{energyoutput.cpp}::EnergyOutputTest::fileManager_'] | 120 | ········['../classgmx_1_1test_1_1anonymous__namespace_02energyoutput_8cpp_03_1_1EnergyOutputTest.xhtml#a6739c595dc4466b69220fdf1dfbe3d71',·1,·'gmx::test::anonymous_namespace{energyoutput.cpp}::EnergyOutputTest::fileManager_'] |
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123 | ····['filematchers_2ecpp_77',·['filematchers.cpp',·['../filematchers_8cpp.xhtml',·1,·'']]], | 123 | ····['filematchers_2ecpp_77',·['filematchers.cpp',·['../filematchers_8cpp.xhtml',·1,·'']]], |
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125 | ····['filemd5_2ecpp_79',·['filemd5.cpp',·['../filemd5_8cpp.xhtml',·1,·'']]], | 125 | ····['filemd5_2ecpp_79',·['filemd5.cpp',·['../filemd5_8cpp.xhtml',·1,·'']]], |
126 | ····['filename_80',·['filename',·['../structgmx_1_1test_1_1anonymous__namespace_02extract__cluster_8cpp_03_1_1ManualOutputFile.xhtml#a7277965d1f059e01d997e98b270af2bb',·1,·'gmx::test::anonymous_namespace{extract_cluster.cpp}::ManualOutputFile']]], | 126 | ····['filename_80',·['filename',·['../structgmx_1_1test_1_1anonymous__namespace_02extract__cluster_8cpp_03_1_1ManualOutputFile.xhtml#a7277965d1f059e01d997e98b270af2bb',·1,·'gmx::test::anonymous_namespace{extract_cluster.cpp}::ManualOutputFile']]], |
127 | ····['filenamelist_81',·['FileNameList',·['../classgmx_1_1test_1_1TestFileManager_1_1Impl.xhtml#a00100912857556c2a0467cd7e0591282',·1,·'gmx::test::TestFileManager::Impl']]], | 127 | ····['filenamelist_81',·['FileNameList',·['../classgmx_1_1test_1_1TestFileManager_1_1Impl.xhtml#a00100912857556c2a0467cd7e0591282',·1,·'gmx::test::TestFileManager::Impl']]], |
128 | ····['filenameoption_82',·['filenameoption',·['../classgmx_1_1FileNameOption.xhtml',·1,·'gmx::FileNameOption'], | ||
128 | ···· | 129 | ········['../classgmx_1_1FileNameOption.xhtml#a4057766b5851a4d02b3913f1984b3891',·1,·'gmx::FileNameOption::FileNameOption()'] |
129 | ········['../classgmx_1_1FileNameOption.xhtml',·1,·'gmx::FileNameOption'] | ||
130 | ····]], | 130 | ····]], |
131 | ····['filenameoption_2ecpp_83',·['filenameoption.cpp',·['../tests_2filenameoption_8cpp.xhtml',·1,·'(Global·Namespace)'], | 131 | ····['filenameoption_2ecpp_83',·['filenameoption.cpp',·['../tests_2filenameoption_8cpp.xhtml',·1,·'(Global·Namespace)'], |
132 | ········['../filenameoption_8cpp.xhtml',·1,·'(Global·Namespace)'] | 132 | ········['../filenameoption_8cpp.xhtml',·1,·'(Global·Namespace)'] |
133 | ····]], | 133 | ····]], |
134 | ····['filenameoption_2eh_84',·['filenameoption.h',·['../filenameoption_8h.xhtml',·1,·'']]], | 134 | ····['filenameoption_2eh_84',·['filenameoption.h',·['../filenameoption_8h.xhtml',·1,·'']]], |
135 | ····['filenameoptioninfo_85',·['filenameoptioninfo',·['../classgmx_1_1FileNameOptionInfo.xhtml',·1,·'gmx::FileNameOptionInfo'], | ||
135 | ···· | 136 | ········['../classgmx_1_1FileNameOptionInfo.xhtml#a90b3bff35cc93cf1efeedb70532f9f87',·1,·'gmx::FileNameOptionInfo::FileNameOptionInfo()'] |
136 | ········['../classgmx_1_1FileNameOptionInfo.xhtml',·1,·'gmx::FileNameOptionInfo'] | ||
137 | ····]], | 137 | ····]], |
138 | ····['filenameoptionmanager_86',·['FileNameOptionManager',·['../classgmx_1_1FileNameOptionManager.xhtml',·1,·'gmx']]], | 138 | ····['filenameoptionmanager_86',·['FileNameOptionManager',·['../classgmx_1_1FileNameOptionManager.xhtml',·1,·'gmx']]], |
139 | ····['filenameoptionmanager_2ecpp_87',·['filenameoptionmanager.cpp',·['../tests_2filenameoptionmanager_8cpp.xhtml',·1,·'(Global·Namespace)'], | 139 | ····['filenameoptionmanager_2ecpp_87',·['filenameoptionmanager.cpp',·['../tests_2filenameoptionmanager_8cpp.xhtml',·1,·'(Global·Namespace)'], |
140 | ········['../filenameoptionmanager_8cpp.xhtml',·1,·'(Global·Namespace)'] | 140 | ········['../filenameoptionmanager_8cpp.xhtml',·1,·'(Global·Namespace)'] |
141 | ····]], | 141 | ····]], |
142 | ····['filenameoptionmanager_2eh_88',·['filenameoptionmanager.h',·['../filenameoptionmanager_8h.xhtml',·1,·'']]], | 142 | ····['filenameoptionmanager_2eh_88',·['filenameoptionmanager.h',·['../filenameoptionmanager_8h.xhtml',·1,·'']]], |
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133 | ····['generatediagonalmasks_73',·['generateDiagonalMasks',·['../namespacegmx.xhtml#a75902569a0fdfb00cfa10f4d063eed7d',·1,·'gmx']]], | 133 | ····['generatediagonalmasks_73',·['generateDiagonalMasks',·['../namespacegmx.xhtml#a75902569a0fdfb00cfa10f4d063eed7d',·1,·'gmx']]], |
134 | ····['generateewaldcorrectiontables_74',·['generateEwaldCorrectionTables',·['../forcetable_8h.xhtml#a09f7b6c414c61fe59569916d4106beb2',·1,·'forcetable.cpp']]], | 134 | ····['generateewaldcorrectiontables_74',·['generateEwaldCorrectionTables',·['../forcetable_8h.xhtml#a09f7b6c414c61fe59569916d4106beb2',·1,·'forcetable.cpp']]], |
135 | ····['generic_75',·['Generic',·['../namespacegmx.xhtml#aa9e7df55e017bd726d027d65551bbd0ca8045a0a6c688b0635e3caccc408a1446',·1,·'gmx']]], | 135 | ····['generic_75',·['Generic',·['../namespacegmx.xhtml#aa9e7df55e017bd726d027d65551bbd0ca8045a0a6c688b0635e3caccc408a1446',·1,·'gmx']]], |
136 | ····['genion_2ecpp_76',·['genion.cpp',·['../tests_2genion_8cpp.xhtml',·1,·'']]], | 136 | ····['genion_2ecpp_76',·['genion.cpp',·['../tests_2genion_8cpp.xhtml',·1,·'']]], |
137 | ····['genqmmmindices_77',·['genQmmmIndices',·['../src_2gromacs_2mimic_2utilities_8h.xhtml#ac8c92f4d2b6d6276c25ae95682de13aa',·1,·'utilities.cpp']]], | 137 | ····['genqmmmindices_77',·['genQmmmIndices',·['../src_2gromacs_2mimic_2utilities_8h.xhtml#ac8c92f4d2b6d6276c25ae95682de13aa',·1,·'utilities.cpp']]], |
138 | ····['genrestr_2ecpp_78',·['genrestr.cpp',·['../tests_2genrestr_8cpp.xhtml',·1,·'']]], | 138 | ····['genrestr_2ecpp_78',·['genrestr.cpp',·['../tests_2genrestr_8cpp.xhtml',·1,·'']]], |
139 | ····['geometric_79',·['Geometric',·['../atomdata_8h.xhtml#a545339c6bb2aa8f6195b8ac73569cbf8aadf9f772a73f364e4ce6c52b9fae740d',·1,·'atomdata.h']]], | 139 | ····['geometric_79',·['Geometric',·['../atomdata_8h.xhtml#a545339c6bb2aa8f6195b8ac73569cbf8aadf9f772a73f364e4ce6c52b9fae740d',·1,·'atomdata.h']]], |
140 | ····['geometry_80',·['geometry',·['../structNbnxm_1_1Grid_1_1Geometry.xhtml',·1,·'Nbnxm::Grid::Geometry'], | ||
140 | ···· | 141 | ········['../structNbnxm_1_1Grid_1_1Geometry.xhtml#a8d9a96a8fdb5462123ab8b2a872d2010',·1,·'Nbnxm::Grid::Geometry::Geometry()'], |
141 | ········['../structt__pullcoord.xhtml#ab8bb3edab80d37b6b59871a5687f3957',·1,·'t_pullcoord::geometry'], | 142 | ········['../structt__pullcoord.xhtml#ab8bb3edab80d37b6b59871a5687f3957',·1,·'t_pullcoord::geometry'], |
142 | ········['../classNbnxm_1_1Grid.xhtml#a6fa53ffa6e33e4a900ff246131cc0972',·1,·'Nbnxm::Grid::geometry() | 143 | ········['../classNbnxm_1_1Grid.xhtml#a6fa53ffa6e33e4a900ff246131cc0972',·1,·'Nbnxm::Grid::geometry()'] |
143 | ········['../structNbnxm_1_1Grid_1_1Geometry.xhtml',·1,·'Nbnxm::Grid::Geometry'] | ||
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145 | ····['get_81',·['get',·['../parser__internal_8h.xhtml#a0c1fffb107955e3a6c98e6a8d44bc66b',·1,·'get(): parser_internal.h'], | ||
146 | ····· | 145 | ····['get_81',·['get',·['../classgmx_1_1GlobalCommandLineHelpContext.xhtml#aaea9dd06988d683d99e633f946d7ad6e',·1,·'gmx::GlobalCommandLineHelpContext::get()'], |
147 | ········['../classgmx_1_1compat_1_1not__null.xhtml#a71e17ffb21e59c1bd4317025e353e85d',·1,·'gmx::compat::not_null::get()'], | 146 | ········['../classgmx_1_1compat_1_1not__null.xhtml#a71e17ffb21e59c1bd4317025e353e85d',·1,·'gmx::compat::not_null::get()'], |
148 | ········['../classgmx_1_1SimulationInputHandle.xhtml#a9a5f2eeb74fc6dd0cad1ab613c5ffe55',·1,·'gmx::SimulationInputHandle::get()'], | 147 | ········['../classgmx_1_1SimulationInputHandle.xhtml#a9a5f2eeb74fc6dd0cad1ab613c5ffe55',·1,·'gmx::SimulationInputHandle::get()'], |
149 | ········['../classgmx_1_1OptionManagerContainer.xhtml#aa4ccc4fe6ad95d34d0ac3ad64c99f3dd',·1,·'gmx::OptionManagerContainer::get()'] | 148 | ········['../classgmx_1_1OptionManagerContainer.xhtml#aa4ccc4fe6ad95d34d0ac3ad64c99f3dd',·1,·'gmx::OptionManagerContainer::get()'], |
149 | ········['../parser__internal_8h.xhtml#a0c1fffb107955e3a6c98e6a8d44bc66b',·1,·'get(ValueType·*src): parser_internal.h'] | ||
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152 | ····['get_5fa_5fline_83',·['get_a_line',·['../strdb_8h.xhtml#a0cd472153523204686e891341870765e',·1,·'strdb.cpp']]], | 152 | ····['get_5fa_5fline_83',·['get_a_line',·['../strdb_8h.xhtml#a0cd472153523204686e891341870765e',·1,·'strdb.cpp']]], |
153 | ····['get_5facffitfn_84',·['get_acffitfn',·['../autocorr_8 | 153 | ····['get_5facffitfn_84',·['get_acffitfn',·['../autocorr_8h.xhtml#ae8203eca8a282a6a6c3193eb7434e740',·1,·'get_acffitfn(): autocorr.cpp'], |
154 | ········['../autocorr_8 | 154 | ········['../autocorr_8cpp.xhtml#ae8203eca8a282a6a6c3193eb7434e740',·1,·'get_acffitfn(): autocorr.cpp'] |
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160 | ····['get_5fcenter_87',·['get_center',·['../groupcoord_8h.xhtml#ac732a95420f31b9a44c7a4abfc371357',·1,·'groupcoord.cpp']]], | 160 | ····['get_5fcenter_87',·['get_center',·['../groupcoord_8h.xhtml#ac732a95420f31b9a44c7a4abfc371357',·1,·'groupcoord.cpp']]], |
161 | ····['get_5fcenter_5fcomm_88',·['get_center_comm',·['../groupcoord_8h.xhtml#a2018383475eefe6a12a0f43a4bf12741',·1,·'groupcoord.cpp']]], | 161 | ····['get_5fcenter_5fcomm_88',·['get_center_comm',·['../groupcoord_8h.xhtml#a2018383475eefe6a12a0f43a4bf12741',·1,·'groupcoord.cpp']]], |
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169 | ····['get_5fheader_94',·['get_header',·['../strdb_8h.xhtml#ae5fc76eb98da3f1abcb12cc2b8e3ae99',·1,·'strdb.h']]], | 169 | ····['get_5fheader_94',·['get_header',·['../strdb_8h.xhtml#ae5fc76eb98da3f1abcb12cc2b8e3ae99',·1,·'strdb.h']]], |
170 | ····['get_5findex_5fof_5fdistant_5fatom_95',·['get_index_of_distant_atom',·['../gromacs_2swap_2swapcoords_8cpp.xhtml#aee789cd0e8c00d7ea9bbc4ca285cb993',·1,·'swapcoords.cpp']]], | 170 | ····['get_5findex_5fof_5fdistant_5fatom_95',·['get_index_of_distant_atom',·['../gromacs_2swap_2swapcoords_8cpp.xhtml#aee789cd0e8c00d7ea9bbc4ca285cb993',·1,·'swapcoords.cpp']]], |
171 | ····['get_5finitial_5fioncounts_96',·['get_initial_ioncounts',·['../gromacs_2swap_2swapcoords_8cpp.xhtml#a2ba5c82e0b901b0d2bc8190f9fb1d1bb',·1,·'swapcoords.cpp']]], | 171 | ····['get_5finitial_5fioncounts_96',·['get_initial_ioncounts',·['../gromacs_2swap_2swapcoords_8cpp.xhtml#a2ba5c82e0b901b0d2bc8190f9fb1d1bb',·1,·'swapcoords.cpp']]], |
172 | ····['get_5finitial_5fioncounts_5ffrom_5fcpt_97',·['get_initial_ioncounts_from_cpt',·['../gromacs_2swap_2swapcoords_8cpp.xhtml#a63688a2d96a14be60358babedf842922',·1,·'swapcoords.cpp']]], | 172 | ····['get_5finitial_5fioncounts_5ffrom_5fcpt_97',·['get_initial_ioncounts_from_cpt',·['../gromacs_2swap_2swapcoords_8cpp.xhtml#a63688a2d96a14be60358babedf842922',·1,·'swapcoords.cpp']]], |
173 | ····['get_5flines_98',·['get_lines',·['../strdb_8h.xhtml#a2884ae147bf969857d0440177a5ea006',·1,·'strdb.cpp']]], | 173 | ····['get_5flines_98',·['get_lines',·['../strdb_8h.xhtml#a2884ae147bf969857d0440177a5ea006',·1,·'strdb.cpp']]], |
174 | ····['get_5fload_5fdistribution_99',·['get_load_distribution',·['../partition_8cpp.xhtml#ae1715b06b973f0a5bb1f6a5d66326008',·1,·'partition.cpp']]], | 174 | ····['get_5fload_5fdistribution_99',·['get_load_distribution',·['../partition_8cpp.xhtml#ae1715b06b973f0a5bb1f6a5d66326008',·1,·'partition.cpp']]], |
175 | ····['get_5fmolecule_5fcenter_100',·['get_molecule_center',·['../gromacs_2swap_2swapcoords_8cpp.xhtml#af701b0cff97e0453bc279d86d0ba0673',·1,·'swapcoords.cpp']]], | 175 | ····['get_5fmolecule_5fcenter_100',·['get_molecule_center',·['../gromacs_2swap_2swapcoords_8cpp.xhtml#af701b0cff97e0453bc279d86d0ba0673',·1,·'swapcoords.cpp']]], |
176 | ····['get_5fnthreads_5fmpi_101',·['get_nthreads_mpi',·['../resourcedivision_8h.xhtml#a66226e873ab77ec209707cc33ad9870c',·1,·'get_nthreads_mpi(const·gmx_hw_info_t·*hwinfo,·gmx_hw_opt_t·*hw_opt,·int·numDevicesToUse,·bool·nonbondedOnGpu,·bool·pmeOnGpu,·const·t_inputrec·*inputrec,·const·gmx_mtop_t·&mtop,·const·gmx::MDLogger·&mdlog,·bool·doMembed): resourcedivision.cpp'], | ||
177 | ····· | 176 | ····['get_5fnthreads_5fmpi_101',·['get_nthreads_mpi',·['../resourcedivision_8cpp.xhtml#a6469a412f67d5ae5b8dddad1b49c1760',·1,·'get_nthreads_mpi(const·gmx_hw_info_t·*hwinfo,·gmx_hw_opt_t·*hw_opt,·const·int·numDevicesToUse,·bool·nonbondedOnGpu,·bool·pmeOnGpu,·co[·...·truncated·by·diffoscope;·len:·130,·SHA:·e06d2fa40159e9fab554ccd68b4c060ee7e9c8acce9939d12742e24a2b04d3e8·...·] |
177 | ········['../resourcedivision_8h.xhtml#a66226e873ab77ec209707cc33ad9870c',·1,·'get_nthreads_mpi(const·gmx_hw_info_t·*hwinfo,·gmx_hw_opt_t·*hw_opt,·int·numDevicesToUse,·bool·nonbondedOnGpu,·bool·pmeOnGpu,·const·t_inputrec·*inputrec,·const·gmx_mtop_t·&mtop,·const·gmx::MDLogger·&mdlog,·bool·doMembed): resourcedivision.cpp'] | ||
178 | ····]], | 178 | ····]], |
179 | ····['get_5fpme_5fddranks_102',·['get_pme_ddranks',·['../domdec_8h.xhtml#a714c31f22cc831f99d57429e1318a98b',·1,·'domdec.cpp']]], | 179 | ····['get_5fpme_5fddranks_102',·['get_pme_ddranks',·['../domdec_8h.xhtml#a714c31f22cc831f99d57429e1318a98b',·1,·'domdec.cpp']]], |
180 | ····['get_5fpull_5fcoord_5fperiod_103',·['get_pull_coord_period',·['../namespacegmx.xhtml#a3fbbd26eeea7fa3fe68cec28833d769a',·1,·'gmx']]], | 180 | ····['get_5fpull_5fcoord_5fperiod_103',·['get_pull_coord_period',·['../namespacegmx.xhtml#a3fbbd26eeea7fa3fe68cec28833d769a',·1,·'gmx']]], |
181 | ····['get_5fpull_5fcoord_5fvalue_104',·['get_pull_coord_value',·['../pull_8h.xhtml#a14d101ec0687b9a06ab451974cb11565',·1,·'get_pull_coord_value(pull_t·*pull,·int·coordIndex,·const·t_pbc·&pbc): pull.cpp'], | 181 | ····['get_5fpull_5fcoord_5fvalue_104',·['get_pull_coord_value',·['../pull_8h.xhtml#a14d101ec0687b9a06ab451974cb11565',·1,·'get_pull_coord_value(pull_t·*pull,·int·coordIndex,·const·t_pbc·&pbc): pull.cpp'], |
182 | ········['../pull_8h.xhtml#a61e53982ac9cc752ddb8f7128a614fb7',·1,·'get_pull_coord_value(pull_t·*pull,·int·coordIndex,·const·t_pbc·&pbc,·double·t): pull.cpp'] | 182 | ········['../pull_8h.xhtml#a61e53982ac9cc752ddb8f7128a614fb7',·1,·'get_pull_coord_value(pull_t·*pull,·int·coordIndex,·const·t_pbc·&pbc,·double·t): pull.cpp'] |
183 | ····]], | 183 | ····]], |
184 | ····['get_5fstate_5ff_5fnorm_5fmax_105',·['get_state_f_norm_max',·['../gromacs_2mdrun_2minimize_8cpp.xhtml#a23699473bd2831abaa740414edb895df',·1,·'minimize.cpp']]], | 184 | ····['get_5fstate_5ff_5fnorm_5fmax_105',·['get_state_f_norm_max',·['../gromacs_2mdrun_2minimize_8cpp.xhtml#a23699473bd2831abaa740414edb895df',·1,·'minimize.cpp']]], |
185 | ····['get_5fsum_5fof_5fpositions_106',·['get_sum_of_positions',·['../groupcoord_8h.xhtml#a5dd8cc38de6142734f8f7ea30a75d192',·1,·'groupcoord.cpp']]], | 185 | ····['get_5fsum_5fof_5fpositions_106',·['get_sum_of_positions',·['../groupcoord_8h.xhtml#a5dd8cc38de6142734f8f7ea30a75d192',·1,·'groupcoord.cpp']]], |
186 | ····['get_5fsymtab_5fhandle_107',·['get_symtab_handle',·['../symtab_8 | 186 | ····['get_5fsymtab_5fhandle_107',·['get_symtab_handle',·['../symtab_8cpp.xhtml#a93dd26914c3871561eeee41a50634a9e',·1,·'get_symtab_handle(t_symtab·*symtab,·int·name): symtab.cpp'], |
187 | ········['../symtab_8 | 187 | ········['../symtab_8h.xhtml#a8a1d044b280872eae269d4482a4f9c25',·1,·'get_symtab_handle(t_symtab·*symtab,·int·index): symtab.cpp'] |
188 | ····]], | 188 | ····]], |
189 | ····['get_5ftmpi_5fomp_5fthread_5fdivision_108',·['get_tmpi_omp_thread_division',·['../resourcedivision_8cpp.xhtml#aeaaeaf817243af7a71a9d73bf0003d89',·1,·'resourcedivision.cpp']]], | 189 | ····['get_5ftmpi_5fomp_5fthread_5fdivision_108',·['get_tmpi_omp_thread_division',·['../resourcedivision_8cpp.xhtml#aeaaeaf817243af7a71a9d73bf0003d89',·1,·'resourcedivision.cpp']]], |
190 | ····['get_5fzone_5fpulse_5fgroups_109',·['get_zone_pulse_groups',·['../partition_8cpp.xhtml#a06a53f0dd4d8e35e2626e157095a1f9f',·1,·'partition.cpp']]], | 190 | ····['get_5fzone_5fpulse_5fgroups_109',·['get_zone_pulse_groups',·['../partition_8cpp.xhtml#a06a53f0dd4d8e35e2626e157095a1f9f',·1,·'partition.cpp']]], |
191 | ····['getadapters_110',·['getAdapters',·['../classgmx_1_1OutputAdapterContainer.xhtml#a2b47d075acb351480698317588de9973',·1,·'gmx::OutputAdapterContainer']]], | 191 | ····['getadapters_110',·['getAdapters',·['../classgmx_1_1OutputAdapterContainer.xhtml#a2b47d075acb351480698317588de9973',·1,·'gmx::OutputAdapterContainer']]], |
192 | ····['getandersenrandomizegroup_111',·['getAndersenRandomizeGroup',·['../classgmx_1_1Update.xhtml#abf212e8923e69307e50782802c65aa3d',·1,·'gmx::Update']]], | 192 | ····['getandersenrandomizegroup_111',·['getAndersenRandomizeGroup',·['../classgmx_1_1Update.xhtml#abf212e8923e69307e50782802c65aa3d',·1,·'gmx::Update']]], |
193 | ····['getangleindices_112',·['getAngleIndices',·['../namespacegmx.xhtml#a3ba035f8e8a15443a11a30d74eb001e4',·1,·'gmx']]], | 193 | ····['getangleindices_112',·['getAngleIndices',·['../namespacegmx.xhtml#a3ba035f8e8a15443a11a30d74eb001e4',·1,·'gmx']]], |
194 | ····['getatomcount_113',·['getAtomCount',·['../classgmx_1_1ITopologyProvider.xhtml#a81d60993ea70526c014ff8d2ba99e197',·1,·'gmx::ITopologyProvider']]], | 194 | ····['getatomcount_113',·['getAtomCount',·['../classgmx_1_1ITopologyProvider.xhtml#a81d60993ea70526c014ff8d2ba99e197',·1,·'gmx::ITopologyProvider']]], |
Offset 252, 24 lines modified | Offset 252, 24 lines modified | ||
252 | ····]], | 252 | ····]], |
253 | ····['getdevicewarpsize_148',·['getDeviceWarpSize',·['../ocl__compiler_8cpp.xhtml#a911aa023e88303869d874e26bc162057',·1,·'gmx::ocl']]], | 253 | ····['getdevicewarpsize_148',·['getDeviceWarpSize',·['../ocl__compiler_8cpp.xhtml#a911aa023e88303869d874e26bc162057',·1,·'gmx::ocl']]], |
254 | ····['getdynamicextents3d_149',·['getDynamicExtents3D',·['../namespacegmx.xhtml#a3879d776773e80fbc6be26f596830036',·1,·'gmx']]], | 254 | ····['getdynamicextents3d_149',·['getDynamicExtents3D',·['../namespacegmx.xhtml#a3879d776773e80fbc6be26f596830036',·1,·'gmx']]], |
255 | ····['getelementpointer_150',·['getElementPointer',·['../namespacegmx.xhtml#aaa8459a3b8ee4373d69727cfed3f0c3e',·1,·'gmx']]], | 255 | ····['getelementpointer_150',·['getElementPointer',·['../namespacegmx.xhtml#aaa8459a3b8ee4373d69727cfed3f0c3e',·1,·'gmx']]], |
256 | ····['getelementpointerimpl_151',·['getelementpointerimpl',·['../classgmx_1_1ExpandedEnsembleElement.xhtml#ab6cb5fcc0b7453e7606829702ce6560e',·1,·'gmx::ExpandedEnsembleElement::getElementPointerImpl()'], | 256 | ····['getelementpointerimpl_151',·['getelementpointerimpl',·['../classgmx_1_1ExpandedEnsembleElement.xhtml#ab6cb5fcc0b7453e7606829702ce6560e',·1,·'gmx::ExpandedEnsembleElement::getElementPointerImpl()'], |
257 | ········['../classgmx_1_1AndersenTemperatureCoupling.xhtml#a2b89b3ec000e03a22c9956a41c625d96',·1,·'gmx::AndersenTemperatureCoupling::getElementPointerImpl()'], | 257 | ········['../classgmx_1_1AndersenTemperatureCoupling.xhtml#a2b89b3ec000e03a22c9956a41c625d96',·1,·'gmx::AndersenTemperatureCoupling::getElementPointerImpl()'], |
258 | ········['../classgmx_1_1ComputeGlobalsElement.xhtml#a63a731ca4083fd3c337e46b71598f167',·1,·'gmx::ComputeGlobalsElement::getElementPointerImpl()'], | 258 | ········['../classgmx_1_1ComputeGlobalsElement.xhtml#a63a731ca4083fd3c337e46b71598f167',·1,·'gmx::ComputeGlobalsElement::getElementPointerImpl()'], |
259 | ········['../classgmx_1_1 | 259 | ········['../classgmx_1_1ConstraintsElement.xhtml#ae06c310ad838f8349b871c005f9d3b3c',·1,·'gmx::ConstraintsElement::getElementPointerImpl()'], |
260 | ········['../classgmx_1_1StatePropagatorData_1_1Element.xhtml#a37385de54eee1d21276db9a43b7812fa',·1,·'gmx::StatePropagatorData::Element::getElementPointerImpl()'], | 260 | ········['../classgmx_1_1StatePropagatorData_1_1Element.xhtml#a37385de54eee1d21276db9a43b7812fa',·1,·'gmx::StatePropagatorData::Element::getElementPointerImpl()'], |
261 | ········['../classgmx_1_1PullElement.xhtml#a53980d2234de0833d5e60633293b8481',·1,·'gmx::PullElement::getElementPointerImpl()'], | 261 | ········['../classgmx_1_1PullElement.xhtml#a53980d2234de0833d5e60633293b8481',·1,·'gmx::PullElement::getElementPointerImpl()'], |
262 | ········['../classgmx_1_1Propagator.xhtml#a5b0ac657e8481ca7dbc9d58ce0860025',·1,·'gmx::Propagator::getElementPointerImpl(LegacySimulatorData·*legacySimulatorData,·ModularSimulatorAlgorithmBuilderHelper·*builderHelper,·StatePropagatorData·*statePropagatorData,·EnergyData·*energyData,·FreeEnergyPerturbationData·*freeEnergyPerturbationData,·GlobalCommunicationHelper·*globalCommunicationHelper,·ObservablesReducer·*observablesReducer,·const·PropagatorTag·&propagatorTag)'], | 262 | ········['../classgmx_1_1Propagator.xhtml#a5b0ac657e8481ca7dbc9d58ce0860025',·1,·'gmx::Propagator::getElementPointerImpl(LegacySimulatorData·*legacySimulatorData,·ModularSimulatorAlgorithmBuilderHelper·*builderHelper,·StatePropagatorData·*statePropagatorData,·EnergyData·*energyData,·FreeEnergyPerturbationData·*freeEnergyPerturbationData,·GlobalCommunicationHelper·*globalCommunicationHelper,·ObservablesReducer·*observablesReducer,·const·PropagatorTag·&propagatorTag)'], |
263 | ········['../classgmx_1_1Propagator.xhtml#a258b129ddc3b062d1dfaea532be87174',·1,·'gmx::Propagator::getElementPointerImpl(LegacySimulatorData·*legacySimulatorData,·ModularSimulatorAlgorithmBuilderHelper·*builderHelper,·StatePropagatorData·*statePropagatorData,·EnergyData·*energyData,·FreeEnergyPerturbationData·*freeEnergyPerturbationData,·GlobalCommunicationHelper·*globalCommunicationHelper,·ObservablesReducer·*observablesReducer,·const·PropagatorTag·&propagatorTag,·TimeStep·timestep)'], | 263 | ········['../classgmx_1_1Propagator.xhtml#a258b129ddc3b062d1dfaea532be87174',·1,·'gmx::Propagator::getElementPointerImpl(LegacySimulatorData·*legacySimulatorData,·ModularSimulatorAlgorithmBuilderHelper·*builderHelper,·StatePropagatorData·*statePropagatorData,·EnergyData·*energyData,·FreeEnergyPerturbationData·*freeEnergyPerturbationData,·GlobalCommunicationHelper·*globalCommunicationHelper,·ObservablesReducer·*observablesReducer,·const·PropagatorTag·&propagatorTag,·TimeStep·timestep)'], |
264 | ········['../classgmx_1_1ParrinelloRahmanBarostat.xhtml#a877e6ed528bab8b29fb9e550f4ff5dde',·1,·'gmx::ParrinelloRahmanBarostat::getElementPointerImpl()'], | 264 | ········['../classgmx_1_1ParrinelloRahmanBarostat.xhtml#a877e6ed528bab8b29fb9e550f4ff5dde',·1,·'gmx::ParrinelloRahmanBarostat::getElementPointerImpl()'], |
265 | ········['../classgmx_1_1NoseHooverChainsElement.xhtml#a7ddc9d053db113bc2ec3bbcef43f1e61',·1,·'gmx::NoseHooverChainsElement::getElementPointerImpl(LegacySimulatorData·*legacySimulatorData,·ModularSimulatorAlgorithmBuilderHelper·*builderHelper,·StatePropagatorData·*statePropagatorData,·EnergyData·*energyData,·FreeEnergyPerturbationData·*freeEnergyPerturbationData,·GlobalCommunicationHelper·*globalCommunicationHelper,·ObservablesReducer·*observablesReducer,·NhcUsage·nhcUsage,·Offset·offset,·UseFullStepKE·useFullStepKE,·ScheduleOnInitStep·scheduleOnInitStep,·const·PropagatorTag·&propagatorTag)'], | 265 | ········['../classgmx_1_1NoseHooverChainsElement.xhtml#a7ddc9d053db113bc2ec3bbcef43f1e61',·1,·'gmx::NoseHooverChainsElement::getElementPointerImpl(LegacySimulatorData·*legacySimulatorData,·ModularSimulatorAlgorithmBuilderHelper·*builderHelper,·StatePropagatorData·*statePropagatorData,·EnergyData·*energyData,·FreeEnergyPerturbationData·*freeEnergyPerturbationData,·GlobalCommunicationHelper·*globalCommunicationHelper,·ObservablesReducer·*observablesReducer,·NhcUsage·nhcUsage,·Offset·offset,·UseFullStepKE·useFullStepKE,·ScheduleOnInitStep·scheduleOnInitStep,·const·PropagatorTag·&propagatorTag)'], |
266 | ········['../classgmx_1_1NoseHooverChainsElement.xhtml#a29a7c74c948b7c602b1dd3313ab69dad',·1,·'gmx::NoseHooverChainsElement::getElementPointerImpl(LegacySimulatorData·*legacySimulatorData,·ModularSimulatorAlgorithmBuilderHelper·*builderHelper,·StatePropagatorData·*statePropagatorData,·EnergyData·*energyData,·FreeEnergyPerturbationData·*freeEnergyPerturbationData,·GlobalCommunicationHelper·*globalCommunicationHelper,·ObservablesReducer·*observablesReducer,·NhcUsage·nhcUsage,·Offset·offset,·UseFullStepKE·useFullStepKE,·ScheduleOnInitStep·scheduleOnInitStep,·const·MttkPropagatorConnectionDetails·&mttkPropagatorConnectionDetails)'], | 266 | ········['../classgmx_1_1NoseHooverChainsElement.xhtml#a29a7c74c948b7c602b1dd3313ab69dad',·1,·'gmx::NoseHooverChainsElement::getElementPointerImpl(LegacySimulatorData·*legacySimulatorData,·ModularSimulatorAlgorithmBuilderHelper·*builderHelper,·StatePropagatorData·*statePropagatorData,·EnergyData·*energyData,·FreeEnergyPerturbationData·*freeEnergyPerturbationData,·GlobalCommunicationHelper·*globalCommunicationHelper,·ObservablesReducer·*observablesReducer,·NhcUsage·nhcUsage,·Offset·offset,·UseFullStepKE·useFullStepKE,·ScheduleOnInitStep·scheduleOnInitStep,·const·MttkPropagatorConnectionDetails·&mttkPropagatorConnectionDetails)'], |
267 | ········['../classgmx_1_1MttkBoxScaling.xhtml#abe8bf6c28d7dabd6f5603e21b2612bb6',·1,·'gmx::MttkBoxScaling::getElementPointerImpl()'], | 267 | ········['../classgmx_1_1MttkBoxScaling.xhtml#abe8bf6c28d7dabd6f5603e21b2612bb6',·1,·'gmx::MttkBoxScaling::getElementPointerImpl()'], |
268 | ········['../classgmx_1_1 | 268 | ········['../classgmx_1_1MttkElement.xhtml#a794ef7d86700bef9f2975129ede52724',·1,·'gmx::MttkElement::getElementPointerImpl()'], |
269 | ········['../classgmx_1_1FreeEnergyPerturbationData_1_1Element.xhtml#ac2b06beaf9f2c844a327ef8638b927dd',·1,·'gmx::FreeEnergyPerturbationData::Element::getElementPointerImpl()'], | 269 | ········['../classgmx_1_1FreeEnergyPerturbationData_1_1Element.xhtml#ac2b06beaf9f2c844a327ef8638b927dd',·1,·'gmx::FreeEnergyPerturbationData::Element::getElementPointerImpl()'], |
270 | ········['../classgmx_1_1ForceElement.xhtml#ad61039db46548d5aba4a98f5a80ad641',·1,·'gmx::ForceElement::getElementPointerImpl()'], | 270 | ········['../classgmx_1_1ForceElement.xhtml#ad61039db46548d5aba4a98f5a80ad641',·1,·'gmx::ForceElement::getElementPointerImpl()'], |
271 | ········['../classgmx_1_1FirstOrderPressureCoupling.xhtml#a12f56f099b4540794a586b9991a05773',·1,·'gmx::FirstOrderPressureCoupling::getElementPointerImpl()'], | 271 | ········['../classgmx_1_1FirstOrderPressureCoupling.xhtml#a12f56f099b4540794a586b9991a05773',·1,·'gmx::FirstOrderPressureCoupling::getElementPointerImpl()'], |
272 | ········['../classgmx_1_1EnergyData_1_1Element.xhtml#a0dc36731c217150cdc10e68565823b85',·1,·'gmx::EnergyData::Element::getElementPointerImpl()'], | 272 | ········['../classgmx_1_1EnergyData_1_1Element.xhtml#a0dc36731c217150cdc10e68565823b85',·1,·'gmx::EnergyData::Element::getElementPointerImpl()'], |
273 | ········['../classgmx_1_1VelocityScalingTemperatureCoupling.xhtml#a6d3fae3a84087b82d9b82d8afbaccc76',·1,·'gmx::VelocityScalingTemperatureCoupling::getElementPointerImpl()'] | 273 | ········['../classgmx_1_1VelocityScalingTemperatureCoupling.xhtml#a6d3fae3a84087b82d9b82d8afbaccc76',·1,·'gmx::VelocityScalingTemperatureCoupling::getElementPointerImpl()'] |
274 | ····]], | 274 | ····]], |
275 | ····['getenergynames_152',·['getEnergyNames',·['../classgmx_1_1test_1_1EnergyComparison.xhtml#a8be89d78763deacd0c8fc3e8ab157286',·1,·'gmx::test::EnergyComparison']]], | 275 | ····['getenergynames_152',·['getEnergyNames',·['../classgmx_1_1test_1_1EnergyComparison.xhtml#a8be89d78763deacd0c8fc3e8ab157286',·1,·'gmx::test::EnergyComparison']]], |
Offset 1414, 17 lines modified | Offset 1414, 17 lines modified | ||
1414 | ····['gnth_995',·['gnth',·['../structomp__module__nthreads__t.xhtml#a74584a24b817803878e0e046ff1fb327',·1,·'omp_module_nthreads_t']]], | 1414 | ····['gnth_995',·['gnth',·['../structomp__module__nthreads__t.xhtml#a74584a24b817803878e0e046ff1fb327',·1,·'omp_module_nthreads_t']]], |
1415 | ····['gnth_5fpme_996',·['gnth_pme',·['../structomp__module__nthreads__t.xhtml#a84a7847560c9b6b7d7ce57935e587f1e',·1,·'omp_module_nthreads_t']]], | 1415 | ····['gnth_5fpme_996',·['gnth_pme',·['../structomp__module__nthreads__t.xhtml#a84a7847560c9b6b7d7ce57935e587f1e',·1,·'omp_module_nthreads_t']]], |
1416 | ····['go_997',·['Go',·['../namespacegmx.xhtml#aa72f45c17038ea5aae00ba6b17cab901a5f075ae3e1f9d0382bb8c4632991f96f',·1,·'gmx']]], | 1416 | ····['go_997',·['Go',·['../namespacegmx.xhtml#aa72f45c17038ea5aae00ba6b17cab901a5f075ae3e1f9d0382bb8c4632991f96f',·1,·'gmx']]], |
1417 | ····['gpp_5fatomtype_2ecpp_998',·['gpp_atomtype.cpp',·['../tests_2gpp__atomtype_8cpp.xhtml',·1,·'']]], | 1417 | ····['gpp_5fatomtype_2ecpp_998',·['gpp_atomtype.cpp',·['../tests_2gpp__atomtype_8cpp.xhtml',·1,·'']]], |
1418 | ····['gpp_5fatomtype_2eh_999',·['gpp_atomtype.h',·['../gpp__atomtype_8h.xhtml',·1,·'']]], | 1418 | ····['gpp_5fatomtype_2eh_999',·['gpp_atomtype.h',·['../gpp__atomtype_8h.xhtml',·1,·'']]], |
1419 | ····['gpp_5fbond_5fatomtype_2ecpp_1000',·['gpp_bond_atomtype.cpp',·['../tests_2gpp__bond__atomtype_8cpp.xhtml',·1,·'']]], | 1419 | ····['gpp_5fbond_5fatomtype_2ecpp_1000',·['gpp_bond_atomtype.cpp',·['../tests_2gpp__bond__atomtype_8cpp.xhtml',·1,·'']]], |
1420 | ····['gpp_5fbond_5fatomtype_2eh_1001',·['gpp_bond_atomtype.h',·['../gpp__bond__atomtype_8h.xhtml',·1,·'']]], | 1420 | ····['gpp_5fbond_5fatomtype_2eh_1001',·['gpp_bond_atomtype.h',·['../gpp__bond__atomtype_8h.xhtml',·1,·'']]], |
1421 | ····['gpu_1002',·['gpu',·['../ | 1421 | ····['gpu_1002',·['gpu',·['../clusterdistancekerneltype_8h.xhtml#a6d74049ae6c72289649a7de671a92068a3432ca64f06615abf07ab44c10cada38',·1,·'Gpu: clusterdistancekerneltype.h'], |
1422 | ········['../namespacegmx_1_1test.xhtml#a12502ff6638f23aeff85ad081f6a0a1ca52f9ec21735243ad9917cda3ca077d32',·1,·'gmx::test::GPU'], | 1422 | ········['../namespacegmx_1_1test.xhtml#a12502ff6638f23aeff85ad081f6a0a1ca52f9ec21735243ad9917cda3ca077d32',·1,·'gmx::test::GPU'], |
1423 | ········['../ | 1423 | ········['../pme_8h.xhtml#adc082ed1af9a4868af13352373ed3791a52f9ec21735243ad9917cda3ca077d32',·1,·'GPU: pme.h'] |
1424 | ····]], | 1424 | ····]], |
1425 | ····['gpu3dfft_1003',·['gpu3dfft',·['../classgmx_1_1Gpu3dFft.xhtml#a601de47c00396f7f8bb2df3fb91a65f0',·1,·'gmx::Gpu3dFft::Gpu3dFft()'], | 1425 | ····['gpu3dfft_1003',·['gpu3dfft',·['../classgmx_1_1Gpu3dFft.xhtml#a601de47c00396f7f8bb2df3fb91a65f0',·1,·'gmx::Gpu3dFft::Gpu3dFft()'], |
1426 | ········['../classgmx_1_1Gpu3dFft.xhtml',·1,·'gmx::Gpu3dFft'] | 1426 | ········['../classgmx_1_1Gpu3dFft.xhtml',·1,·'gmx::Gpu3dFft'] |
1427 | ····]], | 1427 | ····]], |
1428 | ····['gpu_5f3dfft_2ecpp_1004',·['gpu_3dfft.cpp',·['../gpu__3dfft_8cpp.xhtml',·1,·'']]], | 1428 | ····['gpu_5f3dfft_2ecpp_1004',·['gpu_3dfft.cpp',·['../gpu__3dfft_8cpp.xhtml',·1,·'']]], |
1429 | ····['gpu_5f3dfft_2eh_1005',·['gpu_3dfft.h',·['../gpu__3dfft_8h.xhtml',·1,·'']]], | 1429 | ····['gpu_5f3dfft_2eh_1005',·['gpu_3dfft.h',·['../gpu__3dfft_8h.xhtml',·1,·'']]], |
1430 | ····['gpu_5f3dfft_5fcufft_2eh_1006',·['gpu_3dfft_cufft.h',·['../gpu__3dfft__cufft_8h.xhtml',·1,·'']]], | 1430 | ····['gpu_5f3dfft_5fcufft_2eh_1006',·['gpu_3dfft_cufft.h',·['../gpu__3dfft__cufft_8h.xhtml',·1,·'']]], |
Offset 1448, 56 lines modified | Offset 1448, 56 lines modified | ||
1448 | ····['gpu_5f3dfft_5fsycl_5frocfft_2eh_1024',·['gpu_3dfft_sycl_rocfft.h',·['../gpu__3dfft__sycl__rocfft_8h.xhtml',·1,·'']]], | 1448 | ····['gpu_5f3dfft_5fsycl_5frocfft_2eh_1024',·['gpu_3dfft_sycl_rocfft.h',·['../gpu__3dfft__sycl__rocfft_8h.xhtml',·1,·'']]], |
1449 | ····['gpu_5f3dfft_5fsycl_5fvkfft_2ecpp_1025',·['gpu_3dfft_sycl_vkfft.cpp',·['../gpu__3dfft__sycl__vkfft_8cpp.xhtml',·1,·'']]], | 1449 | ····['gpu_5f3dfft_5fsycl_5fvkfft_2ecpp_1025',·['gpu_3dfft_sycl_vkfft.cpp',·['../gpu__3dfft__sycl__vkfft_8cpp.xhtml',·1,·'']]], |
1450 | ····['gpu_5f3dfft_5fsycl_5fvkfft_2eh_1026',·['gpu_3dfft_sycl_vkfft.h',·['../gpu__3dfft__sycl__vkfft_8h.xhtml',·1,·'']]], | 1450 | ····['gpu_5f3dfft_5fsycl_5fvkfft_2eh_1026',·['gpu_3dfft_sycl_vkfft.h',·['../gpu__3dfft__sycl__vkfft_8h.xhtml',·1,·'']]], |
1451 | ····['gpu_5faccumulate_5ftimings_1027',·['gpu_accumulate_timings',·['../namespaceNbnxm.xhtml#a2d3096195938f2b449db6229daaec598',·1,·'Nbnxm']]], | 1451 | ····['gpu_5faccumulate_5ftimings_1027',·['gpu_accumulate_timings',·['../namespaceNbnxm.xhtml#a2d3096195938f2b449db6229daaec598',·1,·'Nbnxm']]], |
1452 | ····['gpu_5fclear_5foutputs_1028',·['gpu_clear_outputs',·['../namespaceNbnxm.xhtml#a0265ef6de04acc0eb2541af1553ed62c',·1,·'Nbnxm']]], | 1452 | ····['gpu_5fclear_5foutputs_1028',·['gpu_clear_outputs',·['../namespaceNbnxm.xhtml#a0265ef6de04acc0eb2541af1553ed62c',·1,·'Nbnxm']]], |
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333 | ····]], | 333 | ····]], |
334 | ····['localatomsetmanager_2eh_225',·['localatomsetmanager.h',·['../localatomsetmanager_8h.xhtml',·1,·'']]], | 334 | ····['localatomsetmanager_2eh_225',·['localatomsetmanager.h',·['../localatomsetmanager_8h.xhtml',·1,·'']]], |
335 | ····['localcomplexgridsize_226',·['localComplexGridSize',·['../structPmeGpuGridParams.xhtml#aa89412c89b24d489e7b1e2a7429372ee',·1,·'PmeGpuGridParams']]], | 335 | ····['localcomplexgridsize_226',·['localComplexGridSize',·['../structPmeGpuGridParams.xhtml#aa89412c89b24d489e7b1e2a7429372ee',·1,·'PmeGpuGridParams']]], |
336 | ····['localcomplexgridsizepadded_227',·['localComplexGridSizePadded',·['../structPmeGpuGridParams.xhtml#a94db264056f3f813dd3c2400f2a01583',·1,·'PmeGpuGridParams']]], | 336 | ····['localcomplexgridsizepadded_227',·['localComplexGridSizePadded',·['../structPmeGpuGridParams.xhtml#a94db264056f3f813dd3c2400f2a01583',·1,·'PmeGpuGridParams']]], |
Offset 343, 20 lines modified | Offset 343, 20 lines modified | ||
343 | ····['localrealgridsize_234',·['localRealGridSize',·['../structPmeGpuSpecific.xhtml#a5dcbdd63f8f51cbe2a32479de9dd53b4',·1,·'PmeGpuSpecific']]], | 343 | ····['localrealgridsize_234',·['localRealGridSize',·['../structPmeGpuSpecific.xhtml#a5dcbdd63f8f51cbe2a32479de9dd53b4',·1,·'PmeGpuSpecific']]], |
344 | ····['localrealgridsizepadded_235',·['localRealGridSizePadded',·['../structPmeGpuSpecific.xhtml#a4f9d4b62a181b53eca290a7a83dfe026',·1,·'PmeGpuSpecific']]], | 344 | ····['localrealgridsizepadded_235',·['localRealGridSizePadded',·['../structPmeGpuSpecific.xhtml#a4f9d4b62a181b53eca290a7a83dfe026',·1,·'PmeGpuSpecific']]], |
345 | ····['localsettledata_236',·['LocalSettleData',·['../structLocalSettleData.xhtml',·1,·'']]], | 345 | ····['localsettledata_236',·['LocalSettleData',·['../structLocalSettleData.xhtml',·1,·'']]], |
346 | ····['localstate_5f_237',·['localState_',·['../classgmx_1_1LocalTopologyChecker_1_1Impl.xhtml#a60706914c73dae1f3b60d4044c9bd89e',·1,·'gmx::LocalTopologyChecker::Impl']]], | 346 | ····['localstate_5f_237',·['localState_',·['../classgmx_1_1LocalTopologyChecker_1_1Impl.xhtml#a60706914c73dae1f3b60d4044c9bd89e',·1,·'gmx::LocalTopologyChecker::Impl']]], |
347 | ····['localstate_5fp_238',·['localState_p',·['../structgmx_1_1SimulatorStateData.xhtml#aee41bc2c165a0237828aeba86ee4bce7',·1,·'gmx::SimulatorStateData']]], | 347 | ····['localstate_5fp_238',·['localState_p',·['../structgmx_1_1SimulatorStateData.xhtml#aee41bc2c165a0237828aeba86ee4bce7',·1,·'gmx::SimulatorStateData']]], |
348 | ····['localtopology_2ecpp_239',·['localtopology.cpp',·['../localtopology_8cpp.xhtml',·1,·'']]], | 348 | ····['localtopology_2ecpp_239',·['localtopology.cpp',·['../localtopology_8cpp.xhtml',·1,·'']]], |
349 | ····['localtopology_2eh_240',·['localtopology.h',·['../localtopology_8h.xhtml',·1,·'']]], | 349 | ····['localtopology_2eh_240',·['localtopology.h',·['../localtopology_8h.xhtml',·1,·'']]], |
350 | ····['localtopology_5f_241',·['localtopology_',·['../classgmx_1_1TopologyData.xhtml#a7fa72da6fd216820f6041bfd63464486',·1,·'gmx::TopologyData::localTopology_'], | ||
351 | ····· | 350 | ····['localtopology_5f_241',·['localtopology_',·['../classgmx_1_1LocalTopologyChecker_1_1Impl.xhtml#a427e585878423e446d362865f25bca32',·1,·'gmx::LocalTopologyChecker::Impl::localTopology_'], |
351 | ········['../classgmx_1_1TopologyData.xhtml#a7fa72da6fd216820f6041bfd63464486',·1,·'gmx::TopologyData::localTopology_'] | ||
352 | ····]], | 352 | ····]], |
353 | ····['localtopologychecker_242',·['localtopologychecker',·['../classgmx_1_1LocalTopologyChecker.xhtml#a | 353 | ····['localtopologychecker_242',·['localtopologychecker',·['../classgmx_1_1LocalTopologyChecker.xhtml#afbf4b761e93e75613df28774bae828b8',·1,·'gmx::LocalTopologyChecker::LocalTopologyChecker(const·MDLogger·&mdlog,·const·t_commrec·*cr,·const·gmx_mtop_t·&mtop,·DDBondedChecking·ddBondedChecking,·const·gmx_localtop_t·&localTopology,·const·t_state·&am[·...·truncated·by·diffoscope;·len:·88,·SHA:·0b60e0c1c8275dba02b49c3ecb25d928a0570a1669149cb72536e325ef71af32·...·])'], |
354 | ········['../classgmx_1_1LocalTopologyChecker.xhtml#a410b2198a2fcfc75045ac8c724f676c1',·1,·'gmx::LocalTopologyChecker::LocalTopologyChecker(LocalTopologyChecker·&&other)·noexcept'], | ||
354 | ········['../classgmx_1_1LocalTopologyChecker.xhtml',·1,·'gmx::LocalTopologyChecker'] | 355 | ········['../classgmx_1_1LocalTopologyChecker.xhtml',·1,·'gmx::LocalTopologyChecker'] |
355 | ········['../classgmx_1_1LocalTopologyChecker.xhtml#afbf4b761e93e75613df28774bae828b8',·1,·'gmx::LocalTopologyChecker::LocalTopologyChecker()'] | ||
356 | ····]], | 356 | ····]], |
357 | ····['localtopologychecker_2ecpp_243',·['localtopologychecker.cpp',·['../localtopologychecker_8cpp.xhtml',·1,·'']]], | 357 | ····['localtopologychecker_2ecpp_243',·['localtopologychecker.cpp',·['../localtopologychecker_8cpp.xhtml',·1,·'']]], |
358 | ····['localtopologychecker_2eh_244',·['localtopologychecker.h',·['../localtopologychecker_8h.xhtml',·1,·'']]], | 358 | ····['localtopologychecker_2eh_244',·['localtopologychecker.h',·['../localtopologychecker_8h.xhtml',·1,·'']]], |
359 | ····['localweights_245',·['localWeights',·['../structpull__group__work__t.xhtml#a493a60c48a16568c697d89236dbb062c',·1,·'pull_group_work_t']]], | 359 | ····['localweights_245',·['localWeights',·['../structpull__group__work__t.xhtml#a493a60c48a16568c697d89236dbb062c',·1,·'pull_group_work_t']]], |
360 | ····['localweightscaling_246',·['localWeightScaling',·['../classgmx_1_1BiasParams.xhtml#afada61a4e15bafed5aa2a02978e8b55b',·1,·'gmx::BiasParams']]], | 360 | ····['localweightscaling_246',·['localWeightScaling',·['../classgmx_1_1BiasParams.xhtml#afada61a4e15bafed5aa2a02978e8b55b',·1,·'gmx::BiasParams']]], |
361 | ····['localweightsum_247',·['localWeightSum',·['../classgmx_1_1PointState.xhtml#a42c85c7025b9f88ccfb845042f681817',·1,·'gmx::PointState']]], | 361 | ····['localweightsum_247',·['localWeightSum',·['../classgmx_1_1PointState.xhtml#a42c85c7025b9f88ccfb845042f681817',·1,·'gmx::PointState']]], |
362 | ····['location_248',·['location',·['../classgmx_1_1SelectionParserValue.xhtml#af55fc99681393cc6c242dff24b87785a',·1,·'gmx::SelectionParserValue::location()'], | 362 | ····['location_248',·['location',·['../classgmx_1_1SelectionParserValue.xhtml#af55fc99681393cc6c242dff24b87785a',·1,·'gmx::SelectionParserValue::location()'], |
Offset 5, 35 lines modified | Offset 5, 35 lines modified | ||
5 | ····['abstractoption_2eh_3',·['abstractoption.h',·['../abstractoption_8h.xhtml',·1,·'']]], | 5 | ····['abstractoption_2eh_3',·['abstractoption.h',·['../abstractoption_8h.xhtml',·1,·'']]], |
6 | ····['abstractoptionstorage_2ecpp_4',·['abstractoptionstorage.cpp',·['../abstractoptionstorage_8cpp.xhtml',·1,·'']]], | 6 | ····['abstractoptionstorage_2ecpp_4',·['abstractoptionstorage.cpp',·['../abstractoptionstorage_8cpp.xhtml',·1,·'']]], |
7 | ····['abstractoptionstorage_2eh_5',·['abstractoptionstorage.h',·['../abstractoptionstorage_8h.xhtml',·1,·'']]], | 7 | ····['abstractoptionstorage_2eh_5',·['abstractoptionstorage.h',·['../abstractoptionstorage_8h.xhtml',·1,·'']]], |
8 | ····['abstractsection_2ecpp_6',·['abstractsection.cpp',·['../abstractsection_8cpp.xhtml',·1,·'']]], | 8 | ····['abstractsection_2ecpp_6',·['abstractsection.cpp',·['../abstractsection_8cpp.xhtml',·1,·'']]], |
9 | ····['abstractsection_2eh_7',·['abstractsection.h',·['../abstractsection_8h.xhtml',·1,·'']]], | 9 | ····['abstractsection_2eh_7',·['abstractsection.h',·['../abstractsection_8h.xhtml',·1,·'']]], |
10 | ····['accessor_5fpolicy_2ecpp_8',·['accessor_policy.cpp',·['../accessor__policy_8cpp.xhtml',·1,·'']]], | 10 | ····['accessor_5fpolicy_2ecpp_8',·['accessor_policy.cpp',·['../accessor__policy_8cpp.xhtml',·1,·'']]], |
11 | ····['accessor_5fpolicy_2eh_9',·['accessor_policy.h',·['../accessor__policy_8h.xhtml',·1,·'']]], | 11 | ····['accessor_5fpolicy_2eh_9',·['accessor_policy.h',·['../accessor__policy_8h.xhtml',·1,·'']]], |
12 | ····['alignedallocator_2ecpp_10',·['alignedallocator.cpp',·['../alignedallocator_8cpp.xhtml',·1,·'(Global·Namespace)'], | 12 | ····['alignedallocator_2ecpp_10',·['alignedallocator.cpp',·['../tests_2alignedallocator_8cpp.xhtml',·1,·'(Global·Namespace)'], |
13 | ········['../ | 13 | ········['../alignedallocator_8cpp.xhtml',·1,·'(Global·Namespace)'] |
14 | ····]], | 14 | ····]], |
15 | ····['alignedallocator_2eh_11',·['alignedallocator.h',·['../alignedallocator_8h.xhtml',·1,·'']]], | 15 | ····['alignedallocator_2eh_11',·['alignedallocator.h',·['../alignedallocator_8h.xhtml',·1,·'']]], |
16 | ····['alignedallocator_5fimpl_2eh_12',·['alignedallocator_impl.h',·['../alignedallocator__impl_8h.xhtml',·1,·'']]], | 16 | ····['alignedallocator_5fimpl_2eh_12',·['alignedallocator_impl.h',·['../alignedallocator__impl_8h.xhtml',·1,·'']]], |
17 | ····['allocator_2eh_13',·['allocator.h',·['../allocator_8h.xhtml',·1,·'']]], | 17 | ····['allocator_2eh_13',·['allocator.h',·['../allocator_8h.xhtml',·1,·'']]], |
18 | ····['analysisdata_2ecpp_14',·['analysisdata.cpp',·['../ | 18 | ····['analysisdata_2ecpp_14',·['analysisdata.cpp',·['../analysisdata_8cpp.xhtml',·1,·'(Global·Namespace)'], |
19 | ········['../analysisdata_8cpp.xhtml',·1,·'(Global·Namespace)'] | 19 | ········['../tests_2analysisdata_8cpp.xhtml',·1,·'(Global·Namespace)'] |
20 | ····]], | 20 | ····]], |
21 | ····['analysisdata_2eh_15',·['analysisdata.h',·['../analysisdata_8h.xhtml',·1,·'']]], | 21 | ····['analysisdata_2eh_15',·['analysisdata.h',·['../analysisdata_8h.xhtml',·1,·'']]], |
22 | ····['analysismodule_2ecpp_16',·['analysismodule.cpp',·['../analysismodule_8cpp.xhtml',·1,·'']]], | 22 | ····['analysismodule_2ecpp_16',·['analysismodule.cpp',·['../analysismodule_8cpp.xhtml',·1,·'']]], |
23 | ····['analysismodule_2eh_17',·['analysismodule.h',·['../api_2legacy_2include_2gromacs_2trajectoryanalysis_2analysismodule_8h.xhtml',·1,·'(Global·Namespace)'], | 23 | ····['analysismodule_2eh_17',·['analysismodule.h',·['../api_2legacy_2include_2gromacs_2trajectoryanalysis_2analysismodule_8h.xhtml',·1,·'(Global·Namespace)'], |
24 | ········['../src_2gromacs_2energyanalysis_2analysismodule_8h.xhtml',·1,·'(Global·Namespace)'] | 24 | ········['../src_2gromacs_2energyanalysis_2analysismodule_8h.xhtml',·1,·'(Global·Namespace)'] |
25 | ····]], | 25 | ····]], |
26 | ····['analysissettings_2ecpp_18',·['analysissettings.cpp',·['../analysissettings_8cpp.xhtml',·1,·'']]], | 26 | ····['analysissettings_2ecpp_18',·['analysissettings.cpp',·['../analysissettings_8cpp.xhtml',·1,·'']]], |
27 | ····['analysissettings_2eh_19',·['analysissettings.h',·['../analysissettings_8h.xhtml',·1,·'']]], | 27 | ····['analysissettings_2eh_19',·['analysissettings.h',·['../analysissettings_8h.xhtml',·1,·'']]], |
28 | ····['analysissettings_5fimpl_2eh_20',·['analysissettings_impl.h',·['../analysissettings__impl_8h.xhtml',·1,·'']]], | 28 | ····['analysissettings_5fimpl_2eh_20',·['analysissettings_impl.h',·['../analysissettings__impl_8h.xhtml',·1,·'']]], |
29 | ····['andersentemperaturecoupling_2ecpp_21',·['andersentemperaturecoupling.cpp',·['../andersentemperaturecoupling_8cpp.xhtml',·1,·'']]], | 29 | ····['andersentemperaturecoupling_2ecpp_21',·['andersentemperaturecoupling.cpp',·['../andersentemperaturecoupling_8cpp.xhtml',·1,·'']]], |
30 | ····['andersentemperaturecoupling_2eh_22',·['andersentemperaturecoupling.h',·['../andersentemperaturecoupling_8h.xhtml',·1,·'']]], | 30 | ····['andersentemperaturecoupling_2eh_22',·['andersentemperaturecoupling.h',·['../andersentemperaturecoupling_8h.xhtml',·1,·'']]], |
31 | ····['angle_2ecpp_23',·['angle.cpp',·['../ | 31 | ····['angle_2ecpp_23',·['angle.cpp',·['../tests_2angle_8cpp.xhtml',·1,·'(Global·Namespace)'], |
32 | ········['../ | 32 | ········['../modules_2angle_8cpp.xhtml',·1,·'(Global·Namespace)'] |
33 | ····]], | 33 | ····]], |
34 | ····['angle_2eh_24',·['angle.h',·['../angle_8h.xhtml',·1,·'']]], | 34 | ····['angle_2eh_24',·['angle.h',·['../angle_8h.xhtml',·1,·'']]], |
35 | ····['any_2ecpp_25',·['any.cpp',·['../any_8cpp.xhtml',·1,·'']]], | 35 | ····['any_2ecpp_25',·['any.cpp',·['../any_8cpp.xhtml',·1,·'']]], |
36 | ····['any_2eh_26',·['any.h',·['../any_8h.xhtml',·1,·'']]], | 36 | ····['any_2eh_26',·['any.h',·['../any_8h.xhtml',·1,·'']]], |
37 | ····['architecture_2eh_27',·['architecture.h',·['../architecture_8h.xhtml',·1,·'']]], | 37 | ····['architecture_2eh_27',·['architecture.h',·['../architecture_8h.xhtml',·1,·'']]], |
38 | ····['arraydata_2ecpp_28',·['arraydata.cpp',·['../tests_2arraydata_8cpp.xhtml',·1,·'(Global·Namespace)'], | 38 | ····['arraydata_2ecpp_28',·['arraydata.cpp',·['../tests_2arraydata_8cpp.xhtml',·1,·'(Global·Namespace)'], |
39 | ········['../arraydata_8cpp.xhtml',·1,·'(Global·Namespace)'] | 39 | ········['../arraydata_8cpp.xhtml',·1,·'(Global·Namespace)'] |
Offset 23, 31 lines modified | Offset 23, 31 lines modified | ||
23 | ····['biassharing_2ecpp_21',·['biassharing.cpp',·['../biassharing_8cpp.xhtml',·1,·'']]], | 23 | ····['biassharing_2ecpp_21',·['biassharing.cpp',·['../biassharing_8cpp.xhtml',·1,·'']]], |
24 | ····['biassharing_2eh_22',·['biassharing.h',·['../biassharing_8h.xhtml',·1,·'']]], | 24 | ····['biassharing_2eh_22',·['biassharing.h',·['../biassharing_8h.xhtml',·1,·'']]], |
25 | ····['biasstate_2ecpp_23',·['biasstate.cpp',·['../biasstate_8cpp.xhtml',·1,·'']]], | 25 | ····['biasstate_2ecpp_23',·['biasstate.cpp',·['../biasstate_8cpp.xhtml',·1,·'']]], |
26 | ····['biasstate_2eh_24',·['biasstate.h',·['../biasstate_8h.xhtml',·1,·'']]], | 26 | ····['biasstate_2eh_24',·['biasstate.h',·['../biasstate_8h.xhtml',·1,·'']]], |
27 | ····['biaswriter_2eh_25',·['biaswriter.h',·['../biaswriter_8h.xhtml',·1,·'']]], | 27 | ····['biaswriter_2eh_25',·['biaswriter.h',·['../biaswriter_8h.xhtml',·1,·'']]], |
28 | ····['binaryinformation_2ecpp_26',·['binaryinformation.cpp',·['../binaryinformation_8cpp.xhtml',·1,·'']]], | 28 | ····['binaryinformation_2ecpp_26',·['binaryinformation.cpp',·['../binaryinformation_8cpp.xhtml',·1,·'']]], |
29 | ····['binaryinformation_2eh_27',·['binaryinformation.h',·['../binaryinformation_8h.xhtml',·1,·'']]], | 29 | ····['binaryinformation_2eh_27',·['binaryinformation.h',·['../binaryinformation_8h.xhtml',·1,·'']]], |
30 | ····['bitmask_2eh_28',·['bitmask.h',·['../ | 30 | ····['bitmask_2eh_28',·['bitmask.h',·['../include_2gromacs_2utility_2bitmask_8h.xhtml',·1,·'(Global·Namespace)'], |
31 | ········['../ | 31 | ········['../tests_2bitmask_8h.xhtml',·1,·'(Global·Namespace)'] |
32 | ····]], | 32 | ····]], |
33 | ····['bonded_2ecpp_29',·['bonded.cpp',·['../tests_2bonded_8cpp.xhtml',·1,·'(Global·Namespace)'], | 33 | ····['bonded_2ecpp_29',·['bonded.cpp',·['../tests_2bonded_8cpp.xhtml',·1,·'(Global·Namespace)'], |
34 | ········['../bonded_8cpp.xhtml',·1,·'(Global·Namespace)'] | 34 | ········['../bonded_8cpp.xhtml',·1,·'(Global·Namespace)'] |
35 | ····]], | 35 | ····]], |
36 | ····['bonded_2eh_30',·['bonded.h',·['../bonded_8h.xhtml',·1,·'']]], | 36 | ····['bonded_2eh_30',·['bonded.h',·['../bonded_8h.xhtml',·1,·'']]], |
37 | ····['booltype_2ecpp_31',·['booltype.cpp',·['../booltype_8cpp.xhtml',·1,·'(Global·Namespace)'], | 37 | ····['booltype_2ecpp_31',·['booltype.cpp',·['../tests_2booltype_8cpp.xhtml',·1,·'(Global·Namespace)'], |
38 | ········['../ | 38 | ········['../booltype_8cpp.xhtml',·1,·'(Global·Namespace)'] |
39 | ····]], | 39 | ····]], |
40 | ····['booltype_2eh_32',·['booltype.h',·['../booltype_8h.xhtml',·1,·'']]], | 40 | ····['booltype_2eh_32',·['booltype.h',·['../booltype_8h.xhtml',·1,·'']]], |
41 | ····['bootstrap_5floadstore_2ecpp_33',·['bootstrap_loadstore.cpp',·['../bootstrap__loadstore_8cpp.xhtml',·1,·'']]], | 41 | ····['bootstrap_5floadstore_2ecpp_33',·['bootstrap_loadstore.cpp',·['../bootstrap__loadstore_8cpp.xhtml',·1,·'']]], |
42 | ····['boundingboxes_2eh_34',·['boundingboxes.h',·['../boundingboxes_8h.xhtml',·1,·'']]], | 42 | ····['boundingboxes_2eh_34',·['boundingboxes.h',·['../boundingboxes_8h.xhtml',·1,·'']]], |
43 | ····['box_2ecpp_35',·['box.cpp',·['../box_8cpp.xhtml',·1,·'']]], | 43 | ····['box_2ecpp_35',·['box.cpp',·['../box_8cpp.xhtml',·1,·'']]], |
44 | ····['box_2eh_36',·['box.h',·['../box_8h.xhtml',·1,·'']]], | 44 | ····['box_2eh_36',·['box.h',·['../box_8h.xhtml',·1,·'']]], |
45 | ····['boxdeformation_2ecpp_37',·['boxdeformation.cpp',·['../ | 45 | ····['boxdeformation_2ecpp_37',·['boxdeformation.cpp',·['../programs_2mdrun_2tests_2boxdeformation_8cpp.xhtml',·1,·'(Global·Namespace)'], |
46 | ········['../ | 46 | ········['../gromacs_2mdlib_2boxdeformation_8cpp.xhtml',·1,·'(Global·Namespace)'] |
47 | ····]], | 47 | ····]], |
48 | ····['boxdeformation_2eh_38',·['boxdeformation.h',·['../boxdeformation_8h.xhtml',·1,·'']]], | 48 | ····['boxdeformation_2eh_38',·['boxdeformation.h',·['../boxdeformation_8h.xhtml',·1,·'']]], |
49 | ····['boxmatrix_2ecpp_39',·['boxmatrix.cpp',·['../boxmatrix_8cpp.xhtml',·1,·'']]], | 49 | ····['boxmatrix_2ecpp_39',·['boxmatrix.cpp',·['../boxmatrix_8cpp.xhtml',·1,·'']]], |
50 | ····['boxmatrix_2eh_40',·['boxmatrix.h',·['../boxmatrix_8h.xhtml',·1,·'']]], | 50 | ····['boxmatrix_2eh_40',·['boxmatrix.h',·['../boxmatrix_8h.xhtml',·1,·'']]], |
51 | ····['boxutilities_2ecpp_41',·['boxutilities.cpp',·['../boxutilities_8cpp.xhtml',·1,·'']]], | 51 | ····['boxutilities_2ecpp_41',·['boxutilities.cpp',·['../boxutilities_8cpp.xhtml',·1,·'']]], |
52 | ····['broadcaststructs_2eh_42',·['broadcaststructs.h',·['../broadcaststructs_8h.xhtml',·1,·'']]], | 52 | ····['broadcaststructs_2eh_42',·['broadcaststructs.h',·['../broadcaststructs_8h.xhtml',·1,·'']]], |
53 | ····['builder_2ecpp_43',·['builder.cpp',·['../builder_8cpp.xhtml',·1,·'']]], | 53 | ····['builder_2ecpp_43',·['builder.cpp',·['../builder_8cpp.xhtml',·1,·'']]], |
Offset 21, 30 lines modified | Offset 21, 30 lines modified | ||
21 | ····['referencetemperaturemanager_2eh_17',·['referencetemperaturemanager.h',·['../referencetemperaturemanager_8h.xhtml',·1,·'']]], | 21 | ····['referencetemperaturemanager_2eh_17',·['referencetemperaturemanager.h',·['../referencetemperaturemanager_8h.xhtml',·1,·'']]], |
22 | ····['register_2ecpp_18',·['register.cpp',·['../frameconverters_2register_8cpp.xhtml',·1,·'(Global·Namespace)'], | 22 | ····['register_2ecpp_18',·['register.cpp',·['../frameconverters_2register_8cpp.xhtml',·1,·'(Global·Namespace)'], |
23 | ········['../tests_2register_8cpp.xhtml',·1,·'(Global·Namespace)'] | 23 | ········['../tests_2register_8cpp.xhtml',·1,·'(Global·Namespace)'] |
24 | ····]], | 24 | ····]], |
25 | ····['register_2eh_19',·['register.h',·['../register_8h.xhtml',·1,·'']]], | 25 | ····['register_2eh_19',·['register.h',·['../register_8h.xhtml',·1,·'']]], |
26 | ····['repeatingsection_2ecpp_20',·['repeatingsection.cpp',·['../repeatingsection_8cpp.xhtml',·1,·'']]], | 26 | ····['repeatingsection_2ecpp_20',·['repeatingsection.cpp',·['../repeatingsection_8cpp.xhtml',·1,·'']]], |
27 | ····['repeatingsection_2eh_21',·['repeatingsection.h',·['../repeatingsection_8h.xhtml',·1,·'']]], | 27 | ····['repeatingsection_2eh_21',·['repeatingsection.h',·['../repeatingsection_8h.xhtml',·1,·'']]], |
28 | ····['replicaexchange_2ecpp_22',·['replicaexchange.cpp',·['../ | 28 | ····['replicaexchange_2ecpp_22',·['replicaexchange.cpp',·['../programs_2mdrun_2tests_2replicaexchange_8cpp.xhtml',·1,·'(Global·Namespace)'], |
29 | ········['../ | 29 | ········['../gromacs_2mdrun_2replicaexchange_8cpp.xhtml',·1,·'(Global·Namespace)'] |
30 | ····]], | 30 | ····]], |
31 | ····['replicaexchange_2eh_23',·['replicaexchange.h',·['../replicaexchange_8h.xhtml',·1,·'']]], | 31 | ····['replicaexchange_2eh_23',·['replicaexchange.h',·['../replicaexchange_8h.xhtml',·1,·'']]], |
32 | ····['replicaexchange_5fequivalence_2ecpp_24',·['replicaexchange_equivalence.cpp',·['../replicaexchange__equivalence_8cpp.xhtml',·1,·'']]], | 32 | ····['replicaexchange_5fequivalence_2ecpp_24',·['replicaexchange_equivalence.cpp',·['../replicaexchange__equivalence_8cpp.xhtml',·1,·'']]], |
33 | ····['report_5fmethods_2ecpp_25',·['report_methods.cpp',·['../tests_2report__methods_8cpp.xhtml',·1,·'']]], | 33 | ····['report_5fmethods_2ecpp_25',·['report_methods.cpp',·['../tests_2report__methods_8cpp.xhtml',·1,·'']]], |
34 | ····['reportgpuusage_2ecpp_26',·['reportgpuusage.cpp',·['../reportgpuusage_8cpp.xhtml',·1,·'']]], | 34 | ····['reportgpuusage_2ecpp_26',·['reportgpuusage.cpp',·['../reportgpuusage_8cpp.xhtml',·1,·'']]], |
35 | ····['reportgpuusage_2eh_27',·['reportgpuusage.h',·['../reportgpuusage_8h.xhtml',·1,·'']]], | 35 | ····['reportgpuusage_2eh_27',·['reportgpuusage.h',·['../reportgpuusage_8h.xhtml',·1,·'']]], |
36 | ····['requirements_2ecpp_28',·['requirements.cpp',·['../requirements_8cpp.xhtml',·1,·'(Global·Namespace)'], | 36 | ····['requirements_2ecpp_28',·['requirements.cpp',·['../requirements_8cpp.xhtml',·1,·'(Global·Namespace)'], |
37 | ········['../tests_2requirements_8cpp.xhtml',·1,·'(Global·Namespace)'] | 37 | ········['../tests_2requirements_8cpp.xhtml',·1,·'(Global·Namespace)'] |
38 | ····]], | 38 | ····]], |
39 | ····['requirements_2eh_29',·['requirements.h',·['../requirements_8h.xhtml',·1,·'(Global·Namespace)'], | 39 | ····['requirements_2eh_29',·['requirements.h',·['../tests_2requirements_8h.xhtml',·1,·'(Global·Namespace)'], |
40 | ········['../ | 40 | ········['../requirements_8h.xhtml',·1,·'(Global·Namespace)'] |
41 | ····]], | 41 | ····]], |
42 | ····['rerun_2ecpp_30',·['rerun.cpp',·['../ | 42 | ····['rerun_2ecpp_30',·['rerun.cpp',·['../programs_2mdrun_2tests_2rerun_8cpp.xhtml',·1,·'(Global·Namespace)'], |
43 | ········['../ | 43 | ········['../gromacs_2mdrun_2rerun_8cpp.xhtml',·1,·'(Global·Namespace)'] |
44 | ····]], | 44 | ····]], |
45 | ····['resall_2eh_31',·['resall.h',·['../resall_8h.xhtml',·1,·'']]], | 45 | ····['resall_2eh_31',·['resall.h',·['../resall_8h.xhtml',·1,·'']]], |
46 | ····['resethandler_2ecpp_32',·['resethandler.cpp',·['../resethandler_8cpp.xhtml',·1,·'']]], | 46 | ····['resethandler_2ecpp_32',·['resethandler.cpp',·['../resethandler_8cpp.xhtml',·1,·'']]], |
47 | ····['resethandler_2eh_33',·['resethandler.h',·['../resethandler_8h.xhtml',·1,·'']]], | 47 | ····['resethandler_2eh_33',·['resethandler.h',·['../resethandler_8h.xhtml',·1,·'']]], |
48 | ····['resourcedivision_2ecpp_34',·['resourcedivision.cpp',·['../resourcedivision_8cpp.xhtml',·1,·'']]], | 48 | ····['resourcedivision_2ecpp_34',·['resourcedivision.cpp',·['../resourcedivision_8cpp.xhtml',·1,·'']]], |
49 | ····['resourcedivision_2eh_35',·['resourcedivision.h',·['../resourcedivision_8h.xhtml',·1,·'']]], | 49 | ····['resourcedivision_2eh_35',·['resourcedivision.h',·['../resourcedivision_8h.xhtml',·1,·'']]], |
50 | ····['restcbt_2ecpp_36',·['restcbt.cpp',·['../restcbt_8cpp.xhtml',·1,·'']]], | 50 | ····['restcbt_2ecpp_36',·['restcbt.cpp',·['../restcbt_8cpp.xhtml',·1,·'']]], |
Offset 1, 10 lines modified | Offset 1, 10 lines modified | ||
1 | var·searchData·=·[ | 1 | var·searchData·=·[ |
2 | ····['sasa_2ecpp_0',·['sasa.cpp',·['../ | 2 | ····['sasa_2ecpp_0',·['sasa.cpp',·['../tests_2sasa_8cpp.xhtml',·1,·'(Global·Namespace)'], |
3 | ········['../ | 3 | ········['../modules_2sasa_8cpp.xhtml',·1,·'(Global·Namespace)'] |
4 | ····]], | 4 | ····]], |
5 | ····['sasa_2eh_1',·['sasa.h',·['../sasa_8h.xhtml',·1,·'']]], | 5 | ····['sasa_2eh_1',·['sasa.h',·['../sasa_8h.xhtml',·1,·'']]], |
6 | ····['scalar_2eh_2',·['scalar.h',·['../scalar_8h.xhtml',·1,·'']]], | 6 | ····['scalar_2eh_2',·['scalar.h',·['../scalar_8h.xhtml',·1,·'']]], |
7 | ····['scalar_5fmath_2eh_3',·['scalar_math.h',·['../scalar__math_8h.xhtml',·1,·'']]], | 7 | ····['scalar_5fmath_2eh_3',·['scalar_math.h',·['../scalar__math_8h.xhtml',·1,·'']]], |
8 | ····['scalar_5futil_2eh_4',·['scalar_util.h',·['../scalar__util_8h.xhtml',·1,·'']]], | 8 | ····['scalar_5futil_2eh_4',·['scalar_util.h',·['../scalar__util_8h.xhtml',·1,·'']]], |
9 | ····['scanner_2eh_5',·['scanner.h',·['../scanner_8h.xhtml',·1,·'']]], | 9 | ····['scanner_2eh_5',·['scanner.h',·['../scanner_8h.xhtml',·1,·'']]], |
10 | ····['scanner_5finternal_2ecpp_6',·['scanner_internal.cpp',·['../scanner__internal_8cpp.xhtml',·1,·'']]], | 10 | ····['scanner_5finternal_2ecpp_6',·['scanner_internal.cpp',·['../scanner__internal_8cpp.xhtml',·1,·'']]], |
Offset 19, 16 lines modified | Offset 19, 16 lines modified | ||
19 | ········['../modules_2scattering_8cpp.xhtml',·1,·'(Global·Namespace)'] | 19 | ········['../modules_2scattering_8cpp.xhtml',·1,·'(Global·Namespace)'] |
20 | ····]], | 20 | ····]], |
21 | ····['scattering_2eh_15',·['scattering.h',·['../scattering_8h.xhtml',·1,·'']]], | 21 | ····['scattering_2eh_15',·['scattering.h',·['../scattering_8h.xhtml',·1,·'']]], |
22 | ····['scatteringfactors_2ecpp_16',·['scatteringfactors.cpp',·['../scatteringfactors_8cpp.xhtml',·1,·'']]], | 22 | ····['scatteringfactors_2ecpp_16',·['scatteringfactors.cpp',·['../scatteringfactors_8cpp.xhtml',·1,·'']]], |
23 | ····['scatteringfactors_2eh_17',·['scatteringfactors.h',·['../scatteringfactors_8h.xhtml',·1,·'']]], | 23 | ····['scatteringfactors_2eh_17',·['scatteringfactors.h',·['../scatteringfactors_8h.xhtml',·1,·'']]], |
24 | ····['seed_2ecpp_18',·['seed.cpp',·['../tests_2seed_8cpp.xhtml',·1,·'']]], | 24 | ····['seed_2ecpp_18',·['seed.cpp',·['../tests_2seed_8cpp.xhtml',·1,·'']]], |
25 | ····['seed_2eh_19',·['seed.h',·['../seed_8h.xhtml',·1,·'']]], | 25 | ····['seed_2eh_19',·['seed.h',·['../seed_8h.xhtml',·1,·'']]], |
26 | ····['select_2ecpp_20',·['select.cpp',·['../ | 26 | ····['select_2ecpp_20',·['select.cpp',·['../tests_2select_8cpp.xhtml',·1,·'(Global·Namespace)'], |
27 | ········['../ | 27 | ········['../modules_2select_8cpp.xhtml',·1,·'(Global·Namespace)'] |
28 | ····]], | 28 | ····]], |
29 | ····['select_2eh_21',·['select.h',·['../select_8h.xhtml',·1,·'']]], | 29 | ····['select_2eh_21',·['select.h',·['../select_8h.xhtml',·1,·'']]], |
30 | ····['selection_2ecpp_22',·['selection.cpp',·['../selection_8cpp.xhtml',·1,·'']]], | 30 | ····['selection_2ecpp_22',·['selection.cpp',·['../selection_8cpp.xhtml',·1,·'']]], |
31 | ····['selection_2eh_23',·['selection.h',·['../selection_8h.xhtml',·1,·'']]], | 31 | ····['selection_2eh_23',·['selection.h',·['../selection_8h.xhtml',·1,·'']]], |
32 | ····['selectioncollection_2ecpp_24',·['selectioncollection.cpp',·['../tests_2selectioncollection_8cpp.xhtml',·1,·'(Global·Namespace)'], | 32 | ····['selectioncollection_2ecpp_24',·['selectioncollection.cpp',·['../tests_2selectioncollection_8cpp.xhtml',·1,·'(Global·Namespace)'], |
33 | ········['../selectioncollection_8cpp.xhtml',·1,·'(Global·Namespace)'] | 33 | ········['../selectioncollection_8cpp.xhtml',·1,·'(Global·Namespace)'] |
34 | ····]], | 34 | ····]], |
Offset 62, 16 lines modified | Offset 62, 16 lines modified | ||
62 | ····['setbothtime_2ecpp_48',·['setbothtime.cpp',·['../setbothtime_8cpp.xhtml',·1,·'']]], | 62 | ····['setbothtime_2ecpp_48',·['setbothtime.cpp',·['../setbothtime_8cpp.xhtml',·1,·'']]], |
63 | ····['setbox_2eh_49',·['setbox.h',·['../setbox_8h.xhtml',·1,·'']]], | 63 | ····['setbox_2eh_49',·['setbox.h',·['../setbox_8h.xhtml',·1,·'']]], |
64 | ····['setenv_2eh_50',·['setenv.h',·['../setenv_8h.xhtml',·1,·'']]], | 64 | ····['setenv_2eh_50',·['setenv.h',·['../setenv_8h.xhtml',·1,·'']]], |
65 | ····['setforces_2ecpp_51',·['setforces.cpp',·['../setforces_8cpp.xhtml',·1,·'']]], | 65 | ····['setforces_2ecpp_51',·['setforces.cpp',·['../setforces_8cpp.xhtml',·1,·'']]], |
66 | ····['setforces_2eh_52',·['setforces.h',·['../setforces_8h.xhtml',·1,·'']]], | 66 | ····['setforces_2eh_52',·['setforces.h',·['../setforces_8h.xhtml',·1,·'']]], |
67 | ····['setprecision_2ecpp_53',·['setprecision.cpp',·['../setprecision_8cpp.xhtml',·1,·'']]], | 67 | ····['setprecision_2ecpp_53',·['setprecision.cpp',·['../setprecision_8cpp.xhtml',·1,·'']]], |
68 | ····['setprecision_2eh_54',·['setprecision.h',·['../setprecision_8h.xhtml',·1,·'']]], | 68 | ····['setprecision_2eh_54',·['setprecision.h',·['../setprecision_8h.xhtml',·1,·'']]], |
69 | ····['setstarttime_2ecpp_55',·['setstarttime.cpp',·['../t | 69 | ····['setstarttime_2ecpp_55',·['setstarttime.cpp',·['../outputadapters_2setstarttime_8cpp.xhtml',·1,·'(Global·Namespace)'], |
70 | ········['../ | 70 | ········['../tests_2setstarttime_8cpp.xhtml',·1,·'(Global·Namespace)'] |
71 | ····]], | 71 | ····]], |
72 | ····['setstarttime_2eh_56',·['setstarttime.h',·['../setstarttime_8h.xhtml',·1,·'']]], | 72 | ····['setstarttime_2eh_56',·['setstarttime.h',·['../setstarttime_8h.xhtml',·1,·'']]], |
73 | ····['settimestep_2ecpp_57',·['settimestep.cpp',·['../outputadapters_2settimestep_8cpp.xhtml',·1,·'(Global·Namespace)'], | 73 | ····['settimestep_2ecpp_57',·['settimestep.cpp',·['../outputadapters_2settimestep_8cpp.xhtml',·1,·'(Global·Namespace)'], |
74 | ········['../tests_2settimestep_8cpp.xhtml',·1,·'(Global·Namespace)'] | 74 | ········['../tests_2settimestep_8cpp.xhtml',·1,·'(Global·Namespace)'] |
75 | ····]], | 75 | ····]], |
76 | ····['settimestep_2eh_58',·['settimestep.h',·['../settimestep_8h.xhtml',·1,·'']]], | 76 | ····['settimestep_2eh_58',·['settimestep.h',·['../settimestep_8h.xhtml',·1,·'']]], |
77 | ····['settle_2ecpp_59',·['settle.cpp',·['../tests_2settle_8cpp.xhtml',·1,·'(Global·Namespace)'], | 77 | ····['settle_2ecpp_59',·['settle.cpp',·['../tests_2settle_8cpp.xhtml',·1,·'(Global·Namespace)'], |
Offset 91, 16 lines modified | Offset 91, 16 lines modified | ||
91 | ····['setvelocities_2eh_71',·['setvelocities.h',·['../setvelocities_8h.xhtml',·1,·'']]], | 91 | ····['setvelocities_2eh_71',·['setvelocities.h',·['../setvelocities_8h.xhtml',·1,·'']]], |
92 | ····['shake_2ecpp_72',·['shake.cpp',·['../shake_8cpp.xhtml',·1,·'']]], | 92 | ····['shake_2ecpp_72',·['shake.cpp',·['../shake_8cpp.xhtml',·1,·'']]], |
93 | ····['shake_2eh_73',·['shake.h',·['../shake_8h.xhtml',·1,·'']]], | 93 | ····['shake_2eh_73',·['shake.h',·['../shake_8h.xhtml',·1,·'']]], |
94 | ····['shellcompletions_2ecpp_74',·['shellcompletions.cpp',·['../shellcompletions_8cpp.xhtml',·1,·'']]], | 94 | ····['shellcompletions_2ecpp_74',·['shellcompletions.cpp',·['../shellcompletions_8cpp.xhtml',·1,·'']]], |
95 | ····['shellcompletions_2eh_75',·['shellcompletions.h',·['../shellcompletions_8h.xhtml',·1,·'']]], | 95 | ····['shellcompletions_2eh_75',·['shellcompletions.h',·['../shellcompletions_8h.xhtml',·1,·'']]], |
96 | ····['signallers_2ecpp_76',·['signallers.cpp',·['../signallers_8cpp.xhtml',·1,·'']]], | 96 | ····['signallers_2ecpp_76',·['signallers.cpp',·['../signallers_8cpp.xhtml',·1,·'']]], |
97 | ····['signallers_2eh_77',·['signallers.h',·['../signallers_8h.xhtml',·1,·'']]], | 97 | ····['signallers_2eh_77',·['signallers.h',·['../signallers_8h.xhtml',·1,·'']]], |
98 | ····['simd_2eh_78',·['simd.h',·['../ | 98 | ····['simd_2eh_78',·['simd.h',·['../include_2gromacs_2simd_2simd_8h.xhtml',·1,·'(Global·Namespace)'], |
99 | ········['../ | 99 | ········['../tests_2simd_8h.xhtml',·1,·'(Global·Namespace)'] |
100 | ····]], | 100 | ····]], |
101 | ····['simd4_2eh_79',·['simd4.h',·['../simd4_8h.xhtml',·1,·'']]], | 101 | ····['simd4_2eh_79',·['simd4.h',·['../simd4_8h.xhtml',·1,·'']]], |
102 | ····['simd_5fkernel_2eh_80',·['simd_kernel.h',·['../simd__kernel_8h.xhtml',·1,·'']]], | 102 | ····['simd_5fkernel_2eh_80',·['simd_kernel.h',·['../simd__kernel_8h.xhtml',·1,·'']]], |
103 | ····['simd_5fload_5fstore_5ffunctions_2eh_81',·['simd_load_store_functions.h',·['../simd__load__store__functions_8h.xhtml',·1,·'']]], | 103 | ····['simd_5fload_5fstore_5ffunctions_2eh_81',·['simd_load_store_functions.h',·['../simd__load__store__functions_8h.xhtml',·1,·'']]], |
104 | ····['simd_5fmath_2eh_82',·['simd_math.h',·['../simd__math_8h.xhtml',·1,·'']]], | 104 | ····['simd_5fmath_2eh_82',·['simd_math.h',·['../simd__math_8h.xhtml',·1,·'']]], |
105 | ····['simd_5fmemory_2ecpp_83',·['simd_memory.cpp',·['../simd__memory_8cpp.xhtml',·1,·'']]], | 105 | ····['simd_5fmemory_2ecpp_83',·['simd_memory.cpp',·['../simd__memory_8cpp.xhtml',·1,·'']]], |
106 | ····['simd_5fmemory_2eh_84',·['simd_memory.h',·['../simd__memory_8h.xhtml',·1,·'']]], | 106 | ····['simd_5fmemory_2eh_84',·['simd_memory.h',·['../simd__memory_8h.xhtml',·1,·'']]], |
Offset 174, 14 lines modified | Offset 174, 14 lines modified | ||
174 | ········['../programs_2mdrun_2tests_2swapcoords_8cpp.xhtml',·1,·'(Global·Namespace)'] | 174 | ········['../programs_2mdrun_2tests_2swapcoords_8cpp.xhtml',·1,·'(Global·Namespace)'] |
175 | ····]], | 175 | ····]], |
176 | ····['swapcoords_2eh_146',·['swapcoords.h',·['../swapcoords_8h.xhtml',·1,·'']]], | 176 | ····['swapcoords_2eh_146',·['swapcoords.h',·['../swapcoords_8h.xhtml',·1,·'']]], |
177 | ····['sycl_5fkernel_5futils_2eh_147',·['sycl_kernel_utils.h',·['../sycl__kernel__utils_8h.xhtml',·1,·'']]], | 177 | ····['sycl_5fkernel_5futils_2eh_147',·['sycl_kernel_utils.h',·['../sycl__kernel__utils_8h.xhtml',·1,·'']]], |
178 | ····['syclutils_2eh_148',·['syclutils.h',·['../syclutils_8h.xhtml',·1,·'']]], | 178 | ····['syclutils_2eh_148',·['syclutils.h',·['../syclutils_8h.xhtml',·1,·'']]], |
179 | ····['symrec_2ecpp_149',·['symrec.cpp',·['../symrec_8cpp.xhtml',·1,·'']]], | 179 | ····['symrec_2ecpp_149',·['symrec.cpp',·['../symrec_8cpp.xhtml',·1,·'']]], |
180 | ····['symrec_2eh_150',·['symrec.h',·['../symrec_8h.xhtml',·1,·'']]], | 180 | ····['symrec_2eh_150',·['symrec.h',·['../symrec_8h.xhtml',·1,·'']]], |
181 | ····['symtab_2ecpp_151',·['symtab.cpp',·['../ | 181 | ····['symtab_2ecpp_151',·['symtab.cpp',·['../symtab_8cpp.xhtml',·1,·'(Global·Namespace)'], |
182 | ········['../symtab_8cpp.xhtml',·1,·'(Global·Namespace)'] | 182 | ········['../tests_2symtab_8cpp.xhtml',·1,·'(Global·Namespace)'] |
183 | ····]], | 183 | ····]], |
184 | ····['symtab_2eh_152',·['symtab.h',·['../symtab_8h.xhtml',·1,·'']]], | 184 | ····['symtab_2eh_152',·['symtab.h',·['../symtab_8h.xhtml',·1,·'']]], |
185 | ····['sysinfo_2ecpp_153',·['sysinfo.cpp',·['../sysinfo_8cpp.xhtml',·1,·'']]], | 185 | ····['sysinfo_2ecpp_153',·['sysinfo.cpp',·['../sysinfo_8cpp.xhtml',·1,·'']]], |
186 | ····['sysinfo_2eh_154',·['sysinfo.h',·['../sysinfo_8h.xhtml',·1,·'']]] | 186 | ····['sysinfo_2eh_154',·['sysinfo.h',·['../sysinfo_8h.xhtml',·1,·'']]] |
187 | ]; | 187 | ]; |
Offset 20, 12 lines modified | Offset 20, 12 lines modified | ||
20 | ········['../usergpuids_8cpp.xhtml',·1,·'(Global·Namespace)'] | 20 | ········['../usergpuids_8cpp.xhtml',·1,·'(Global·Namespace)'] |
21 | ····]], | 21 | ····]], |
22 | ····['usergpuids_2eh_18',·['usergpuids.h',·['../usergpuids_8h.xhtml',·1,·'']]], | 22 | ····['usergpuids_2eh_18',·['usergpuids.h',·['../usergpuids_8h.xhtml',·1,·'']]], |
23 | ····['utilities_2eh_19',·['utilities.h',·['../src_2gromacs_2mimic_2utilities_8h.xhtml',·1,·'(Global·Namespace)'], | 23 | ····['utilities_2eh_19',·['utilities.h',·['../src_2gromacs_2mimic_2utilities_8h.xhtml',·1,·'(Global·Namespace)'], |
24 | ········['../src_2gromacs_2listed__forces_2utilities_8h.xhtml',·1,·'(Global·Namespace)'] | 24 | ········['../src_2gromacs_2listed__forces_2utilities_8h.xhtml',·1,·'(Global·Namespace)'] |
25 | ····]], | 25 | ····]], |
26 | ····['utility_2ecpp_20',·['utility.cpp',·['../utility_8cpp.xhtml',·1,·'']]], | 26 | ····['utility_2ecpp_20',·['utility.cpp',·['../utility_8cpp.xhtml',·1,·'']]], |
27 | ····['utility_2eh_21',·['utility.h',·['../ | 27 | ····['utility_2eh_21',·['utility.h',·['../utility_8h.xhtml',·1,·'(Global·Namespace)'], |
28 | ········['../domdec_2utility_8h.xhtml',·1,·'(Global·Namespace)'], | 28 | ········['../domdec_2utility_8h.xhtml',·1,·'(Global·Namespace)'], |
29 | ········['../utility_8h.xhtml',·1,·'(Global·Namespace)'] | 29 | ········['../compat_2utility_8h.xhtml',·1,·'(Global·Namespace)'] |
30 | ····]] | 30 | ····]] |
31 | ]; | 31 | ]; |
Offset 30, 16 lines modified | Offset 30, 16 lines modified | ||
30 | ········['../cmdlinehelpwriter_8cpp.xhtml',·1,·'(Global·Namespace)'] | 30 | ········['../cmdlinehelpwriter_8cpp.xhtml',·1,·'(Global·Namespace)'] |
31 | ····]], | 31 | ····]], |
32 | ····['cmdlinehelpwriter_2eh_22',·['cmdlinehelpwriter.h',·['../cmdlinehelpwriter_8h.xhtml',·1,·'']]], | 32 | ····['cmdlinehelpwriter_2eh_22',·['cmdlinehelpwriter.h',·['../cmdlinehelpwriter_8h.xhtml',·1,·'']]], |
33 | ····['cmdlineinit_2ecpp_23',·['cmdlineinit.cpp',·['../cmdlineinit_8cpp.xhtml',·1,·'']]], | 33 | ····['cmdlineinit_2ecpp_23',·['cmdlineinit.cpp',·['../cmdlineinit_8cpp.xhtml',·1,·'']]], |
34 | ····['cmdlineinit_2eh_24',·['cmdlineinit.h',·['../cmdlineinit_8h.xhtml',·1,·'']]], | 34 | ····['cmdlineinit_2eh_24',·['cmdlineinit.h',·['../cmdlineinit_8h.xhtml',·1,·'']]], |
35 | ····['cmdlinemodule_2ecpp_25',·['cmdlinemodule.cpp',·['../cmdlinemodule_8cpp.xhtml',·1,·'']]], | 35 | ····['cmdlinemodule_2ecpp_25',·['cmdlinemodule.cpp',·['../cmdlinemodule_8cpp.xhtml',·1,·'']]], |
36 | ····['cmdlinemodule_2eh_26',·['cmdlinemodule.h',·['../cmdlinemodule_8h.xhtml',·1,·'']]], | 36 | ····['cmdlinemodule_2eh_26',·['cmdlinemodule.h',·['../cmdlinemodule_8h.xhtml',·1,·'']]], |
37 | ····['cmdlinemodulemanager_2ecpp_27',·['cmdlinemodulemanager.cpp',·['../ | 37 | ····['cmdlinemodulemanager_2ecpp_27',·['cmdlinemodulemanager.cpp',·['../cmdlinemodulemanager_8cpp.xhtml',·1,·'(Global·Namespace)'], |
38 | ········['../cmdlinemodulemanager_8cpp.xhtml',·1,·'(Global·Namespace)'] | 38 | ········['../tests_2cmdlinemodulemanager_8cpp.xhtml',·1,·'(Global·Namespace)'] |
39 | ····]], | 39 | ····]], |
40 | ····['cmdlinemodulemanager_2eh_28',·['cmdlinemodulemanager.h',·['../cmdlinemodulemanager_8h.xhtml',·1,·'']]], | 40 | ····['cmdlinemodulemanager_2eh_28',·['cmdlinemodulemanager.h',·['../cmdlinemodulemanager_8h.xhtml',·1,·'']]], |
41 | ····['cmdlinemodulemanager_5fimpl_2eh_29',·['cmdlinemodulemanager_impl.h',·['../cmdlinemodulemanager__impl_8h.xhtml',·1,·'']]], | 41 | ····['cmdlinemodulemanager_5fimpl_2eh_29',·['cmdlinemodulemanager_impl.h',·['../cmdlinemodulemanager__impl_8h.xhtml',·1,·'']]], |
42 | ····['cmdlinemodulemanagertest_2ecpp_30',·['cmdlinemodulemanagertest.cpp',·['../cmdlinemodulemanagertest_8cpp.xhtml',·1,·'']]], | 42 | ····['cmdlinemodulemanagertest_2ecpp_30',·['cmdlinemodulemanagertest.cpp',·['../cmdlinemodulemanagertest_8cpp.xhtml',·1,·'']]], |
43 | ····['cmdlinemodulemanagertest_2eh_31',·['cmdlinemodulemanagertest.h',·['../cmdlinemodulemanagertest_8h.xhtml',·1,·'']]], | 43 | ····['cmdlinemodulemanagertest_2eh_31',·['cmdlinemodulemanagertest.h',·['../cmdlinemodulemanagertest_8h.xhtml',·1,·'']]], |
44 | ····['cmdlineoptionsmodule_2ecpp_32',·['cmdlineoptionsmodule.cpp',·['../cmdlineoptionsmodule_8cpp.xhtml',·1,·'']]], | 44 | ····['cmdlineoptionsmodule_2ecpp_32',·['cmdlineoptionsmodule.cpp',·['../cmdlineoptionsmodule_8cpp.xhtml',·1,·'']]], |
45 | ····['cmdlineoptionsmodule_2eh_33',·['cmdlineoptionsmodule.h',·['../cmdlineoptionsmodule_8h.xhtml',·1,·'']]], | 45 | ····['cmdlineoptionsmodule_2eh_33',·['cmdlineoptionsmodule.h',·['../cmdlineoptionsmodule_8h.xhtml',·1,·'']]], |
Offset 65, 26 lines modified | Offset 65, 26 lines modified | ||
65 | ····['colvarsforceprovider_2ecpp_47',·['colvarsforceprovider.cpp',·['../tests_2colvarsforceprovider_8cpp.xhtml',·1,·'(Global·Namespace)'], | 65 | ····['colvarsforceprovider_2ecpp_47',·['colvarsforceprovider.cpp',·['../tests_2colvarsforceprovider_8cpp.xhtml',·1,·'(Global·Namespace)'], |
66 | ········['../colvarsforceprovider_8cpp.xhtml',·1,·'(Global·Namespace)'] | 66 | ········['../colvarsforceprovider_8cpp.xhtml',·1,·'(Global·Namespace)'] |
67 | ····]], | 67 | ····]], |
68 | ····['colvarsforceprovider_2eh_48',·['colvarsforceprovider.h',·['../colvarsforceprovider_8h.xhtml',·1,·'']]], | 68 | ····['colvarsforceprovider_2eh_48',·['colvarsforceprovider.h',·['../colvarsforceprovider_8h.xhtml',·1,·'']]], |
69 | ····['colvarsmdmodule_2ecpp_49',·['colvarsMDModule.cpp',·['../colvarsMDModule_8cpp.xhtml',·1,·'']]], | 69 | ····['colvarsmdmodule_2ecpp_49',·['colvarsMDModule.cpp',·['../colvarsMDModule_8cpp.xhtml',·1,·'']]], |
70 | ····['colvarsmdmodule_2eh_50',·['colvarsMDModule.h',·['../colvarsMDModule_8h.xhtml',·1,·'']]], | 70 | ····['colvarsmdmodule_2eh_50',·['colvarsMDModule.h',·['../colvarsMDModule_8h.xhtml',·1,·'']]], |
71 | ····['colvarsmdmodule_5fstub_2ecpp_51',·['colvarsMDModule_stub.cpp',·['../colvarsMDModule__stub_8cpp.xhtml',·1,·'']]], | 71 | ····['colvarsmdmodule_5fstub_2ecpp_51',·['colvarsMDModule_stub.cpp',·['../colvarsMDModule__stub_8cpp.xhtml',·1,·'']]], |
72 | ····['colvarsoptions_2ecpp_52',·['colvarsoptions.cpp',·['../ | 72 | ····['colvarsoptions_2ecpp_52',·['colvarsoptions.cpp',·['../colvarsoptions_8cpp.xhtml',·1,·'(Global·Namespace)'], |
73 | ········['../colvarsoptions_8cpp.xhtml',·1,·'(Global·Namespace)'] | 73 | ········['../tests_2colvarsoptions_8cpp.xhtml',·1,·'(Global·Namespace)'] |
74 | ····]], | 74 | ····]], |
75 | ····['colvarsoptions_2eh_53',·['colvarsoptions.h',·['../colvarsoptions_8h.xhtml',·1,·'']]], | 75 | ····['colvarsoptions_2eh_53',·['colvarsoptions.h',·['../colvarsoptions_8h.xhtml',·1,·'']]], |
76 | ····['colvarspreprocessor_2ecpp_54',·['colvarspreprocessor.cpp',·['../colvarspreprocessor_8cpp.xhtml',·1,·'(Global·Namespace)'], | 76 | ····['colvarspreprocessor_2ecpp_54',·['colvarspreprocessor.cpp',·['../tests_2colvarspreprocessor_8cpp.xhtml',·1,·'(Global·Namespace)'], |
77 | ········['../ | 77 | ········['../colvarspreprocessor_8cpp.xhtml',·1,·'(Global·Namespace)'] |
78 | ····]], | 78 | ····]], |
79 | ····['colvarspreprocessor_2eh_55',·['colvarspreprocessor.h',·['../colvarspreprocessor_8h.xhtml',·1,·'']]], | 79 | ····['colvarspreprocessor_2eh_55',·['colvarspreprocessor.h',·['../colvarspreprocessor_8h.xhtml',·1,·'']]], |
80 | ····['colvarssimulationsparameters_2ecpp_56',·['colvarssimulationsparameters.cpp',·['../colvarssimulationsparameters_8cpp.xhtml',·1,·'']]], | 80 | ····['colvarssimulationsparameters_2ecpp_56',·['colvarssimulationsparameters.cpp',·['../colvarssimulationsparameters_8cpp.xhtml',·1,·'']]], |
81 | ····['colvarssimulationsparameters_2eh_57',·['colvarssimulationsparameters.h',·['../colvarssimulationsparameters_8h.xhtml',·1,·'']]], | 81 | ····['colvarssimulationsparameters_2eh_57',·['colvarssimulationsparameters.h',·['../colvarssimulationsparameters_8h.xhtml',·1,·'']]], |
82 | ····['com_2ecpp_58',·['com.cpp',·['../ | 82 | ····['com_2ecpp_58',·['com.cpp',·['../com_8cpp.xhtml',·1,·'(Global·Namespace)'], |
83 | ········['../com_8cpp.xhtml',·1,·'(Global·Namespace)'] | 83 | ········['../tests_2com_8cpp.xhtml',·1,·'(Global·Namespace)'] |
84 | ····]], | 84 | ····]], |
85 | ····['com_2eh_59',·['com.h',·['../com_8h.xhtml',·1,·'']]], | 85 | ····['com_2eh_59',·['com.h',·['../com_8h.xhtml',·1,·'']]], |
86 | ····['compare_2eh_60',·['compare.h',·['../compare_8h.xhtml',·1,·'']]], | 86 | ····['compare_2eh_60',·['compare.h',·['../compare_8h.xhtml',·1,·'']]], |
87 | ····['comparison_5fhelpers_2eh_61',·['comparison_helpers.h',·['../comparison__helpers_8h.xhtml',·1,·'']]], | 87 | ····['comparison_5fhelpers_2eh_61',·['comparison_helpers.h',·['../comparison__helpers_8h.xhtml',·1,·'']]], |
88 | ····['compiler_2ecpp_62',·['compiler.cpp',·['../compiler_8cpp.xhtml',·1,·'']]], | 88 | ····['compiler_2ecpp_62',·['compiler.cpp',·['../compiler_8cpp.xhtml',·1,·'']]], |
89 | ····['compiler_2eh_63',·['compiler.h',·['../compiler_8h.xhtml',·1,·'']]], | 89 | ····['compiler_2eh_63',·['compiler.h',·['../compiler_8h.xhtml',·1,·'']]], |
90 | ····['compositesimulatorelement_2ecpp_64',·['compositesimulatorelement.cpp',·['../compositesimulatorelement_8cpp.xhtml',·1,·'']]], | 90 | ····['compositesimulatorelement_2ecpp_64',·['compositesimulatorelement.cpp',·['../compositesimulatorelement_8cpp.xhtml',·1,·'']]], |
Offset 130, 16 lines modified | Offset 130, 16 lines modified | ||
130 | ····['correlationdataset_2eh_98',·['correlationdataset.h',·['../correlationdataset_8h.xhtml',·1,·'']]], | 130 | ····['correlationdataset_2eh_98',·['correlationdataset.h',·['../correlationdataset_8h.xhtml',·1,·'']]], |
131 | ····['correlationgrid_2ecpp_99',·['correlationgrid.cpp',·['../correlationgrid_8cpp.xhtml',·1,·'']]], | 131 | ····['correlationgrid_2ecpp_99',·['correlationgrid.cpp',·['../correlationgrid_8cpp.xhtml',·1,·'']]], |
132 | ····['correlationgrid_2eh_100',·['correlationgrid.h',·['../correlationgrid_8h.xhtml',·1,·'']]], | 132 | ····['correlationgrid_2eh_100',·['correlationgrid.h',·['../correlationgrid_8h.xhtml',·1,·'']]], |
133 | ····['correlationhistory_2ecpp_101',·['correlationhistory.cpp',·['../correlationhistory_8cpp.xhtml',·1,·'']]], | 133 | ····['correlationhistory_2ecpp_101',·['correlationhistory.cpp',·['../correlationhistory_8cpp.xhtml',·1,·'']]], |
134 | ····['correlationhistory_2eh_102',·['correlationhistory.h',·['../correlationhistory_8h.xhtml',·1,·'']]], | 134 | ····['correlationhistory_2eh_102',·['correlationhistory.h',·['../correlationhistory_8h.xhtml',·1,·'']]], |
135 | ····['correlationtensor_2ecpp_103',·['correlationtensor.cpp',·['../correlationtensor_8cpp.xhtml',·1,·'']]], | 135 | ····['correlationtensor_2ecpp_103',·['correlationtensor.cpp',·['../correlationtensor_8cpp.xhtml',·1,·'']]], |
136 | ····['correlationtensor_2eh_104',·['correlationtensor.h',·['../correlationtensor_8h.xhtml',·1,·'']]], | 136 | ····['correlationtensor_2eh_104',·['correlationtensor.h',·['../correlationtensor_8h.xhtml',·1,·'']]], |
137 | ····['cpuinfo_2ecpp_105',·['cpuinfo.cpp',·['../ | 137 | ····['cpuinfo_2ecpp_105',·['cpuinfo.cpp',·['../cpuinfo_8cpp.xhtml',·1,·'(Global·Namespace)'], |
138 | ········['../cpuinfo_8cpp.xhtml',·1,·'(Global·Namespace)'] | 138 | ········['../tests_2cpuinfo_8cpp.xhtml',·1,·'(Global·Namespace)'] |
139 | ····]], | 139 | ····]], |
140 | ····['cpuinfo_2eh_106',·['cpuinfo.h',·['../cpuinfo_8h.xhtml',·1,·'']]], | 140 | ····['cpuinfo_2eh_106',·['cpuinfo.h',·['../cpuinfo_8h.xhtml',·1,·'']]], |
141 | ····['crosscorr_2ecpp_107',·['crosscorr.cpp',·['../crosscorr_8cpp.xhtml',·1,·'']]], | 141 | ····['crosscorr_2ecpp_107',·['crosscorr.cpp',·['../crosscorr_8cpp.xhtml',·1,·'']]], |
142 | ····['crosscorr_2eh_108',·['crosscorr.h',·['../crosscorr_8h.xhtml',·1,·'']]], | 142 | ····['crosscorr_2eh_108',·['crosscorr.h',·['../crosscorr_8h.xhtml',·1,·'']]], |
143 | ····['cstringutil_2ecpp_109',·['cstringutil.cpp',·['../tests_2cstringutil_8cpp.xhtml',·1,·'']]], | 143 | ····['cstringutil_2ecpp_109',·['cstringutil.cpp',·['../tests_2cstringutil_8cpp.xhtml',·1,·'']]], |
144 | ····['cstringutil_2eh_110',·['cstringutil.h',·['../cstringutil_8h.xhtml',·1,·'']]], | 144 | ····['cstringutil_2eh_110',·['cstringutil.h',·['../cstringutil_8h.xhtml',·1,·'']]], |
145 | ····['cubicsplinetable_2ecpp_111',·['cubicsplinetable.cpp',·['../cubicsplinetable_8cpp.xhtml',·1,·'']]], | 145 | ····['cubicsplinetable_2ecpp_111',·['cubicsplinetable.cpp',·['../cubicsplinetable_8cpp.xhtml',·1,·'']]], |
Offset 27, 25 lines modified | Offset 27, 25 lines modified | ||
27 | ····['densityfitting_2ecpp_23',·['densityfitting.cpp',·['../densityfitting_8cpp.xhtml',·1,·'(Global·Namespace)'], | 27 | ····['densityfitting_2ecpp_23',·['densityfitting.cpp',·['../densityfitting_8cpp.xhtml',·1,·'(Global·Namespace)'], |
28 | ········['../tests_2densityfitting_8cpp.xhtml',·1,·'(Global·Namespace)'] | 28 | ········['../tests_2densityfitting_8cpp.xhtml',·1,·'(Global·Namespace)'] |
29 | ····]], | 29 | ····]], |
30 | ····['densityfittingamplitudelookup_2ecpp_24',·['densityfittingamplitudelookup.cpp',·['../densityfittingamplitudelookup_8cpp.xhtml',·1,·'(Global·Namespace)'], | 30 | ····['densityfittingamplitudelookup_2ecpp_24',·['densityfittingamplitudelookup.cpp',·['../densityfittingamplitudelookup_8cpp.xhtml',·1,·'(Global·Namespace)'], |
31 | ········['../tests_2densityfittingamplitudelookup_8cpp.xhtml',·1,·'(Global·Namespace)'] | 31 | ········['../tests_2densityfittingamplitudelookup_8cpp.xhtml',·1,·'(Global·Namespace)'] |
32 | ····]], | 32 | ····]], |
33 | ····['densityfittingamplitudelookup_2eh_25',·['densityfittingamplitudelookup.h',·['../densityfittingamplitudelookup_8h.xhtml',·1,·'']]], | 33 | ····['densityfittingamplitudelookup_2eh_25',·['densityfittingamplitudelookup.h',·['../densityfittingamplitudelookup_8h.xhtml',·1,·'']]], |
34 | ····['densityfittingforce_2ecpp_26',·['densityfittingforce.cpp',·['../ | 34 | ····['densityfittingforce_2ecpp_26',·['densityfittingforce.cpp',·['../densityfittingforce_8cpp.xhtml',·1,·'(Global·Namespace)'], |
35 | ········['../densityfittingforce_8cpp.xhtml',·1,·'(Global·Namespace)'] | 35 | ········['../tests_2densityfittingforce_8cpp.xhtml',·1,·'(Global·Namespace)'] |
36 | ····]], | 36 | ····]], |
37 | ····['densityfittingforce_2eh_27',·['densityfittingforce.h',·['../densityfittingforce_8h.xhtml',·1,·'']]], | 37 | ····['densityfittingforce_2eh_27',·['densityfittingforce.h',·['../densityfittingforce_8h.xhtml',·1,·'']]], |
38 | ····['densityfittingforceprovider_2ecpp_28',·['densityfittingforceprovider.cpp',·['../densityfittingforceprovider_8cpp.xhtml',·1,·'(Global·Namespace)'], | 38 | ····['densityfittingforceprovider_2ecpp_28',·['densityfittingforceprovider.cpp',·['../densityfittingforceprovider_8cpp.xhtml',·1,·'(Global·Namespace)'], |
39 | ········['../tests_2densityfittingforceprovider_8cpp.xhtml',·1,·'(Global·Namespace)'] | 39 | ········['../tests_2densityfittingforceprovider_8cpp.xhtml',·1,·'(Global·Namespace)'] |
40 | ····]], | 40 | ····]], |
41 | ····['densityfittingforceprovider_2eh_29',·['densityfittingforceprovider.h',·['../densityfittingforceprovider_8h.xhtml',·1,·'']]], | 41 | ····['densityfittingforceprovider_2eh_29',·['densityfittingforceprovider.h',·['../densityfittingforceprovider_8h.xhtml',·1,·'']]], |
42 | ····['densityfittingmodule_2ecpp_30',·['densityfittingmodule.cpp',·['../densityfittingmodule_8cpp.xhtml',·1,·'']]], | 42 | ····['densityfittingmodule_2ecpp_30',·['densityfittingmodule.cpp',·['../densityfittingmodule_8cpp.xhtml',·1,·'']]], |
43 | ····['densityfittingoptions_2ecpp_31',·['densityfittingoptions.cpp',·['../ | 43 | ····['densityfittingoptions_2ecpp_31',·['densityfittingoptions.cpp',·['../densityfittingoptions_8cpp.xhtml',·1,·'(Global·Namespace)'], |
44 | ········['../densityfittingoptions_8cpp.xhtml',·1,·'(Global·Namespace)'] | 44 | ········['../tests_2densityfittingoptions_8cpp.xhtml',·1,·'(Global·Namespace)'] |
45 | ····]], | 45 | ····]], |
46 | ····['densityfittingoptions_2eh_32',·['densityfittingoptions.h',·['../densityfittingoptions_8h.xhtml',·1,·'']]], | 46 | ····['densityfittingoptions_2eh_32',·['densityfittingoptions.h',·['../densityfittingoptions_8h.xhtml',·1,·'']]], |
47 | ····['densityfittingoutputprovider_2ecpp_33',·['densityfittingoutputprovider.cpp',·['../densityfittingoutputprovider_8cpp.xhtml',·1,·'']]], | 47 | ····['densityfittingoutputprovider_2ecpp_33',·['densityfittingoutputprovider.cpp',·['../densityfittingoutputprovider_8cpp.xhtml',·1,·'']]], |
48 | ····['densityfittingoutputprovider_2eh_34',·['densityfittingoutputprovider.h',·['../densityfittingoutputprovider_8h.xhtml',·1,·'']]], | 48 | ····['densityfittingoutputprovider_2eh_34',·['densityfittingoutputprovider.h',·['../densityfittingoutputprovider_8h.xhtml',·1,·'']]], |
49 | ····['densityfittingparameters_2eh_35',·['densityfittingparameters.h',·['../densityfittingparameters_8h.xhtml',·1,·'']]], | 49 | ····['densityfittingparameters_2eh_35',·['densityfittingparameters.h',·['../densityfittingparameters_8h.xhtml',·1,·'']]], |
50 | ····['device_5favailability_2ecpp_36',·['device_availability.cpp',·['../device__availability_8cpp.xhtml',·1,·'']]], | 50 | ····['device_5favailability_2ecpp_36',·['device_availability.cpp',·['../device__availability_8cpp.xhtml',·1,·'']]], |
51 | ····['device_5fbuffer_2ecpp_37',·['device_buffer.cpp',·['../device__buffer_8cpp.xhtml',·1,·'']]], | 51 | ····['device_5fbuffer_2ecpp_37',·['device_buffer.cpp',·['../device__buffer_8cpp.xhtml',·1,·'']]], |
Offset 53, 16 lines modified | Offset 53, 16 lines modified | ||
53 | ····['device_5fcontext_2eh_39',·['device_context.h',·['../device__context_8h.xhtml',·1,·'']]], | 53 | ····['device_5fcontext_2eh_39',·['device_context.h',·['../device__context_8h.xhtml',·1,·'']]], |
54 | ····['device_5fcontext_5focl_2ecpp_40',·['device_context_ocl.cpp',·['../device__context__ocl_8cpp.xhtml',·1,·'']]], | 54 | ····['device_5fcontext_5focl_2ecpp_40',·['device_context_ocl.cpp',·['../device__context__ocl_8cpp.xhtml',·1,·'']]], |
55 | ····['device_5fcontext_5fsycl_2ecpp_41',·['device_context_sycl.cpp',·['../device__context__sycl_8cpp.xhtml',·1,·'']]], | 55 | ····['device_5fcontext_5fsycl_2ecpp_41',·['device_context_sycl.cpp',·['../device__context__sycl_8cpp.xhtml',·1,·'']]], |
56 | ····['device_5fevent_2eh_42',·['device_event.h',·['../device__event_8h.xhtml',·1,·'']]], | 56 | ····['device_5fevent_2eh_42',·['device_event.h',·['../device__event_8h.xhtml',·1,·'']]], |
57 | ····['device_5fevent_5focl_2eh_43',·['device_event_ocl.h',·['../device__event__ocl_8h.xhtml',·1,·'']]], | 57 | ····['device_5fevent_5focl_2eh_43',·['device_event_ocl.h',·['../device__event__ocl_8h.xhtml',·1,·'']]], |
58 | ····['device_5fevent_5fsycl_2eh_44',·['device_event_sycl.h',·['../device__event__sycl_8h.xhtml',·1,·'']]], | 58 | ····['device_5fevent_5fsycl_2eh_44',·['device_event_sycl.h',·['../device__event__sycl_8h.xhtml',·1,·'']]], |
59 | ····['device_5finformation_2eh_45',·['device_information.h',·['../device__information_8h.xhtml',·1,·'']]], | 59 | ····['device_5finformation_2eh_45',·['device_information.h',·['../device__information_8h.xhtml',·1,·'']]], |
60 | ····['device_5fmanagement_2ecpp_46',·['device_management.cpp',·['../ | 60 | ····['device_5fmanagement_2ecpp_46',·['device_management.cpp',·['../device__management_8cpp.xhtml',·1,·'(Global·Namespace)'], |
61 | ········['../device__management_8cpp.xhtml',·1,·'(Global·Namespace)'] | 61 | ········['../tests_2device__management_8cpp.xhtml',·1,·'(Global·Namespace)'] |
62 | ····]], | 62 | ····]], |
63 | ····['device_5fmanagement_2eh_47',·['device_management.h',·['../device__management_8h.xhtml',·1,·'']]], | 63 | ····['device_5fmanagement_2eh_47',·['device_management.h',·['../device__management_8h.xhtml',·1,·'']]], |
64 | ····['device_5fmanagement_5fcommon_2ecpp_48',·['device_management_common.cpp',·['../device__management__common_8cpp.xhtml',·1,·'']]], | 64 | ····['device_5fmanagement_5fcommon_2ecpp_48',·['device_management_common.cpp',·['../device__management__common_8cpp.xhtml',·1,·'']]], |
65 | ····['device_5fmanagement_5focl_2ecpp_49',·['device_management_ocl.cpp',·['../device__management__ocl_8cpp.xhtml',·1,·'']]], | 65 | ····['device_5fmanagement_5focl_2ecpp_49',·['device_management_ocl.cpp',·['../device__management__ocl_8cpp.xhtml',·1,·'']]], |
66 | ····['device_5fmanagement_5fsycl_2ecpp_50',·['device_management_sycl.cpp',·['../device__management__sycl_8cpp.xhtml',·1,·'']]], | 66 | ····['device_5fmanagement_5fsycl_2ecpp_50',·['device_management_sycl.cpp',·['../device__management__sycl_8cpp.xhtml',·1,·'']]], |
67 | ····['device_5fmanagement_5fsycl_5fintel_5fdevice_5fids_2ecpp_51',·['device_management_sycl_intel_device_ids.cpp',·['../device__management__sycl__intel__device__ids_8cpp.xhtml',·1,·'']]], | 67 | ····['device_5fmanagement_5fsycl_5fintel_5fdevice_5fids_2ecpp_51',·['device_management_sycl_intel_device_ids.cpp',·['../device__management__sycl__intel__device__ids_8cpp.xhtml',·1,·'']]], |
68 | ····['device_5fmanagement_5fsycl_5fintel_5fdevice_5fids_2eh_52',·['device_management_sycl_intel_device_ids.h',·['../device__management__sycl__intel__device__ids_8h.xhtml',·1,·'']]], | 68 | ····['device_5fmanagement_5fsycl_5fintel_5fdevice_5fids_2eh_52',·['device_management_sycl_intel_device_ids.h',·['../device__management__sycl__intel__device__ids_8h.xhtml',·1,·'']]], |
Offset 40, 16 lines modified | Offset 40, 16 lines modified | ||
40 | ····['forceoutput_2eh_32',·['forceoutput.h',·['../forceoutput_8h.xhtml',·1,·'']]], | 40 | ····['forceoutput_2eh_32',·['forceoutput.h',·['../forceoutput_8h.xhtml',·1,·'']]], |
41 | ····['forcetable_2eh_33',·['forcetable.h',·['../forcetable_8h.xhtml',·1,·'']]], | 41 | ····['forcetable_2eh_33',·['forcetable.h',·['../forcetable_8h.xhtml',·1,·'']]], |
42 | ····['frameaverager_2ecpp_34',·['frameaverager.cpp',·['../frameaverager_8cpp.xhtml',·1,·'']]], | 42 | ····['frameaverager_2ecpp_34',·['frameaverager.cpp',·['../frameaverager_8cpp.xhtml',·1,·'']]], |
43 | ····['frameaverager_2eh_35',·['frameaverager.h',·['../frameaverager_8h.xhtml',·1,·'']]], | 43 | ····['frameaverager_2eh_35',·['frameaverager.h',·['../frameaverager_8h.xhtml',·1,·'']]], |
44 | ····['frameconverter_2eh_36',·['frameconverter.h',·['../frameconverter_8h.xhtml',·1,·'']]], | 44 | ····['frameconverter_2eh_36',·['frameconverter.h',·['../frameconverter_8h.xhtml',·1,·'']]], |
45 | ····['frameconverterenums_2eh_37',·['frameconverterenums.h',·['../frameconverterenums_8h.xhtml',·1,·'']]], | 45 | ····['frameconverterenums_2eh_37',·['frameconverterenums.h',·['../frameconverterenums_8h.xhtml',·1,·'']]], |
46 | ····['framelocaldata_2eh_38',·['framelocaldata.h',·['../framelocaldata_8h.xhtml',·1,·'']]], | 46 | ····['framelocaldata_2eh_38',·['framelocaldata.h',·['../framelocaldata_8h.xhtml',·1,·'']]], |
47 | ····['freeenergy_2ecpp_39',·['freeenergy.cpp',·['../ | 47 | ····['freeenergy_2ecpp_39',·['freeenergy.cpp',·['../programs_2mdrun_2tests_2freeenergy_8cpp.xhtml',·1,·'(Global·Namespace)'], |
48 | ········['../ | 48 | ········['../gromacs_2mdrunutility_2freeenergy_8cpp.xhtml',·1,·'(Global·Namespace)'] |
49 | ····]], | 49 | ····]], |
50 | ····['freeenergy_2eh_40',·['freeenergy.h',·['../freeenergy_8h.xhtml',·1,·'']]], | 50 | ····['freeenergy_2eh_40',·['freeenergy.h',·['../freeenergy_8h.xhtml',·1,·'']]], |
51 | ····['freeenergydispatch_2eh_41',·['freeenergydispatch.h',·['../freeenergydispatch_8h.xhtml',·1,·'']]], | 51 | ····['freeenergydispatch_2eh_41',·['freeenergydispatch.h',·['../freeenergydispatch_8h.xhtml',·1,·'']]], |
52 | ····['freeenergyparameters_2ecpp_42',·['freeenergyparameters.cpp',·['../tests_2freeenergyparameters_8cpp.xhtml',·1,·'(Global·Namespace)'], | 52 | ····['freeenergyparameters_2ecpp_42',·['freeenergyparameters.cpp',·['../tests_2freeenergyparameters_8cpp.xhtml',·1,·'(Global·Namespace)'], |
53 | ········['../freeenergyparameters_8cpp.xhtml',·1,·'(Global·Namespace)'] | 53 | ········['../freeenergyparameters_8cpp.xhtml',·1,·'(Global·Namespace)'] |
54 | ····]], | 54 | ····]], |
55 | ····['freeenergyparameters_2eh_43',·['freeenergyparameters.h',·['../freeenergyparameters_8h.xhtml',·1,·'']]], | 55 | ····['freeenergyparameters_2eh_43',·['freeenergyparameters.h',·['../freeenergyparameters_8h.xhtml',·1,·'']]], |
Offset 91, 12 lines modified | Offset 91, 12 lines modified | ||
91 | ····['gridset_2ecpp_87',·['gridset.cpp',·['../gridset_8cpp.xhtml',·1,·'']]], | 91 | ····['gridset_2ecpp_87',·['gridset.cpp',·['../gridset_8cpp.xhtml',·1,·'']]], |
92 | ····['gridset_2eh_88',·['gridset.h',·['../gridset_8h.xhtml',·1,·'']]], | 92 | ····['gridset_2eh_88',·['gridset.h',·['../gridset_8h.xhtml',·1,·'']]], |
93 | ····['gridsetdata_2eh_89',·['gridsetdata.h',·['../gridsetdata_8h.xhtml',·1,·'']]], | 93 | ····['gridsetdata_2eh_89',·['gridsetdata.h',·['../gridsetdata_8h.xhtml',·1,·'']]], |
94 | ····['grompp_2ecpp_90',·['grompp.cpp',·['../programs_2mdrun_2tests_2grompp_8cpp.xhtml',·1,·'']]], | 94 | ····['grompp_2ecpp_90',·['grompp.cpp',·['../programs_2mdrun_2tests_2grompp_8cpp.xhtml',·1,·'']]], |
95 | ····['grompp_5fdirectives_2ecpp_91',·['grompp_directives.cpp',·['../grompp__directives_8cpp.xhtml',·1,·'']]], | 95 | ····['grompp_5fdirectives_2ecpp_91',·['grompp_directives.cpp',·['../grompp__directives_8cpp.xhtml',·1,·'']]], |
96 | ····['group_2ecpp_92',·['group.cpp',·['../group_8cpp.xhtml',·1,·'']]], | 96 | ····['group_2ecpp_92',·['group.cpp',·['../group_8cpp.xhtml',·1,·'']]], |
97 | ····['groupcoord_2eh_93',·['groupcoord.h',·['../groupcoord_8h.xhtml',·1,·'']]], | 97 | ····['groupcoord_2eh_93',·['groupcoord.h',·['../groupcoord_8h.xhtml',·1,·'']]], |
98 | ····['gyrate_2ecpp_94',·['gyrate.cpp',·['../ | 98 | ····['gyrate_2ecpp_94',·['gyrate.cpp',·['../tests_2gyrate_8cpp.xhtml',·1,·'(Global·Namespace)'], |
99 | ········['../ | 99 | ········['../modules_2gyrate_8cpp.xhtml',·1,·'(Global·Namespace)'] |
100 | ····]], | 100 | ····]], |
101 | ····['gyrate_2eh_95',·['gyrate.h',·['../gyrate_8h.xhtml',·1,·'']]] | 101 | ····['gyrate_2eh_95',·['gyrate.h',·['../gyrate_8h.xhtml',·1,·'']]] |
102 | ]; | 102 | ]; |
Offset 9, 36 lines modified | Offset 9, 36 lines modified | ||
9 | ····['hardwaretopology_2eh_5',·['hardwaretopology.h',·['../hardwaretopology_8h.xhtml',·1,·'']]], | 9 | ····['hardwaretopology_2eh_5',·['hardwaretopology.h',·['../hardwaretopology_8h.xhtml',·1,·'']]], |
10 | ····['hashedmap_2ecpp_6',·['hashedmap.cpp',·['../hashedmap_8cpp.xhtml',·1,·'']]], | 10 | ····['hashedmap_2ecpp_6',·['hashedmap.cpp',·['../hashedmap_8cpp.xhtml',·1,·'']]], |
11 | ····['hashedmap_2eh_7',·['hashedmap.h',·['../hashedmap_8h.xhtml',·1,·'']]], | 11 | ····['hashedmap_2eh_7',·['hashedmap.h',·['../hashedmap_8h.xhtml',·1,·'']]], |
12 | ····['hbond_2ecpp_8',·['hbond.cpp',·['../tests_2hbond_8cpp.xhtml',·1,·'(Global·Namespace)'], | 12 | ····['hbond_2ecpp_8',·['hbond.cpp',·['../tests_2hbond_8cpp.xhtml',·1,·'(Global·Namespace)'], |
13 | ········['../modules_2hbond_8cpp.xhtml',·1,·'(Global·Namespace)'] | 13 | ········['../modules_2hbond_8cpp.xhtml',·1,·'(Global·Namespace)'] |
14 | ····]], | 14 | ····]], |
15 | ····['hbond_2eh_9',·['hbond.h',·['../hbond_8h.xhtml',·1,·'']]], | 15 | ····['hbond_2eh_9',·['hbond.h',·['../hbond_8h.xhtml',·1,·'']]], |
16 | ····['helpformat_2ecpp_10',·['helpformat.cpp',·['../ | 16 | ····['helpformat_2ecpp_10',·['helpformat.cpp',·['../helpformat_8cpp.xhtml',·1,·'(Global·Namespace)'], |
17 | ········['../helpformat_8cpp.xhtml',·1,·'(Global·Namespace)'] | 17 | ········['../tests_2helpformat_8cpp.xhtml',·1,·'(Global·Namespace)'] |
18 | ····]], | 18 | ····]], |
19 | ····['helpformat_2eh_11',·['helpformat.h',·['../helpformat_8h.xhtml',·1,·'']]], | 19 | ····['helpformat_2eh_11',·['helpformat.h',·['../helpformat_8h.xhtml',·1,·'']]], |
20 | ····['helpmanager_2ecpp_12',·['helpmanager.cpp',·['../helpmanager_8cpp.xhtml',·1,·'(Global·Namespace)'], | 20 | ····['helpmanager_2ecpp_12',·['helpmanager.cpp',·['../tests_2helpmanager_8cpp.xhtml',·1,·'(Global·Namespace)'], |
21 | ········['../ | 21 | ········['../helpmanager_8cpp.xhtml',·1,·'(Global·Namespace)'] |
22 | ····]], | 22 | ····]], |
23 | ····['helpmanager_2eh_13',·['helpmanager.h',·['../helpmanager_8h.xhtml',·1,·'']]], | 23 | ····['helpmanager_2eh_13',·['helpmanager.h',·['../helpmanager_8h.xhtml',·1,·'']]], |
24 | ····['helptopic_2ecpp_14',·['helptopic.cpp',·['../helptopic_8cpp.xhtml',·1,·'']]], | 24 | ····['helptopic_2ecpp_14',·['helptopic.cpp',·['../helptopic_8cpp.xhtml',·1,·'']]], |
25 | ····['helptopic_2eh_15',·['helptopic.h',·['../helptopic_8h.xhtml',·1,·'']]], | 25 | ····['helptopic_2eh_15',·['helptopic.h',·['../helptopic_8h.xhtml',·1,·'']]], |
26 | ····['helpwritercontext_2ecpp_16',·['helpwritercontext.cpp',·['../ | 26 | ····['helpwritercontext_2ecpp_16',·['helpwritercontext.cpp',·['../helpwritercontext_8cpp.xhtml',·1,·'(Global·Namespace)'], |
27 | ········['../helpwritercontext_8cpp.xhtml',·1,·'(Global·Namespace)'] | 27 | ········['../tests_2helpwritercontext_8cpp.xhtml',·1,·'(Global·Namespace)'] |
28 | ····]], | 28 | ····]], |
29 | ····['helpwritercontext_2eh_17',·['helpwritercontext.h',·['../helpwritercontext_8h.xhtml',·1,·'']]], | 29 | ····['helpwritercontext_2eh_17',·['helpwritercontext.h',·['../helpwritercontext_8h.xhtml',·1,·'']]], |
30 | ····['helpwriting_2ecpp_18',·['helpwriting.cpp',·['../ | 30 | ····['helpwriting_2ecpp_18',·['helpwriting.cpp',·['../programs_2mdrun_2tests_2helpwriting_8cpp.xhtml',·1,·'(Global·Namespace)'], |
31 | ········['../ | 31 | ········['../gromacs_2tools_2tests_2helpwriting_8cpp.xhtml',·1,·'(Global·Namespace)'] |
32 | ····]], | 32 | ····]], |
33 | ····['histogram_2ecpp_19',·['histogram.cpp',·['../ | 33 | ····['histogram_2ecpp_19',·['histogram.cpp',·['../modules_2histogram_8cpp.xhtml',·1,·'(Global·Namespace)'], |
34 | ········['../ | 34 | ········['../tests_2histogram_8cpp.xhtml',·1,·'(Global·Namespace)'] |
35 | ····]], | 35 | ····]], |
36 | ····['histogram_2eh_20',·['histogram.h',·['../histogram_8h.xhtml',·1,·'']]], | 36 | ····['histogram_2eh_20',·['histogram.h',·['../histogram_8h.xhtml',·1,·'']]], |
37 | ····['histogramsize_2ecpp_21',·['histogramsize.cpp',·['../histogramsize_8cpp.xhtml',·1,·'']]], | 37 | ····['histogramsize_2ecpp_21',·['histogramsize.cpp',·['../histogramsize_8cpp.xhtml',·1,·'']]], |
38 | ····['histogramsize_2eh_22',·['histogramsize.h',·['../histogramsize_8h.xhtml',·1,·'']]], | 38 | ····['histogramsize_2eh_22',·['histogramsize.h',·['../histogramsize_8h.xhtml',·1,·'']]], |
39 | ····['hostallocator_2ecpp_23',·['hostallocator.cpp',·['../ | 39 | ····['hostallocator_2ecpp_23',·['hostallocator.cpp',·['../hostallocator_8cpp.xhtml',·1,·'(Global·Namespace)'], |
40 | ········['../hostallocator_8cpp.xhtml',·1,·'(Global·Namespace)'] | 40 | ········['../tests_2hostallocator_8cpp.xhtml',·1,·'(Global·Namespace)'] |
41 | ····]], | 41 | ····]], |
42 | ····['hostallocator_2eh_24',·['hostallocator.h',·['../hostallocator_8h.xhtml',·1,·'']]], | 42 | ····['hostallocator_2eh_24',·['hostallocator.h',·['../hostallocator_8h.xhtml',·1,·'']]], |
43 | ····['hsimd_5fdeclarations_2eh_25',·['hsimd_declarations.h',·['../hsimd__declarations_8h.xhtml',·1,·'']]] | 43 | ····['hsimd_5fdeclarations_2eh_25',·['hsimd_declarations.h',·['../hsimd__declarations_8h.xhtml',·1,·'']]] |
44 | ]; | 44 | ]; |
Offset 51, 32 lines modified | Offset 51, 32 lines modified | ||
51 | ····['mock_5fhelptopic_2eh_39',·['mock_helptopic.h',·['../mock__helptopic_8h.xhtml',·1,·'']]], | 51 | ····['mock_5fhelptopic_2eh_39',·['mock_helptopic.h',·['../mock__helptopic_8h.xhtml',·1,·'']]], |
52 | ····['mockhardwaretopology_2ecpp_40',·['mockhardwaretopology.cpp',·['../mockhardwaretopology_8cpp.xhtml',·1,·'']]], | 52 | ····['mockhardwaretopology_2ecpp_40',·['mockhardwaretopology.cpp',·['../mockhardwaretopology_8cpp.xhtml',·1,·'']]], |
53 | ····['modularsimulator_2ecpp_41',·['modularsimulator.cpp',·['../modularsimulator_8cpp.xhtml',·1,·'']]], | 53 | ····['modularsimulator_2ecpp_41',·['modularsimulator.cpp',·['../modularsimulator_8cpp.xhtml',·1,·'']]], |
54 | ····['modularsimulator_2eh_42',·['modularsimulator.h',·['../modularsimulator_8h.xhtml',·1,·'']]], | 54 | ····['modularsimulator_2eh_42',·['modularsimulator.h',·['../modularsimulator_8h.xhtml',·1,·'']]], |
55 | ····['modularsimulatorinterfaces_2eh_43',·['modularsimulatorinterfaces.h',·['../modularsimulatorinterfaces_8h.xhtml',·1,·'']]], | 55 | ····['modularsimulatorinterfaces_2eh_43',·['modularsimulatorinterfaces.h',·['../modularsimulatorinterfaces_8h.xhtml',·1,·'']]], |
56 | ····['modules_2ecpp_44',·['modules.cpp',·['../modules_8cpp.xhtml',·1,·'']]], | 56 | ····['modules_2ecpp_44',·['modules.cpp',·['../modules_8cpp.xhtml',·1,·'']]], |
57 | ····['modules_2eh_45',·['modules.h',·['../modules_8h.xhtml',·1,·'']]], | 57 | ····['modules_2eh_45',·['modules.h',·['../modules_8h.xhtml',·1,·'']]], |
58 | ····['moduletest_2ecpp_46',·['moduletest.cpp',·['../ | 58 | ····['moduletest_2ecpp_46',·['moduletest.cpp',·['../gromacs_2trajectoryanalysis_2tests_2moduletest_8cpp.xhtml',·1,·'(Global·Namespace)'], |
59 | ········['../ | 59 | ········['../programs_2mdrun_2tests_2moduletest_8cpp.xhtml',·1,·'(Global·Namespace)'] |
60 | ····]], | 60 | ····]], |
61 | ····['moduletest_2eh_47',·['moduletest.h',·['../ | 61 | ····['moduletest_2eh_47',·['moduletest.h',·['../gromacs_2trajectoryanalysis_2tests_2moduletest_8h.xhtml',·1,·'(Global·Namespace)'], |
62 | ········['../ | 62 | ········['../programs_2mdrun_2tests_2moduletest_8h.xhtml',·1,·'(Global·Namespace)'] |
63 | ····]], | 63 | ····]], |
64 | ····['mp11_2eh_48',·['mp11.h',·['../mp11_8h.xhtml',·1,·'']]], | 64 | ····['mp11_2eh_48',·['mp11.h',·['../mp11_8h.xhtml',·1,·'']]], |
65 | ····['mpi_5fprinter_2eh_49',·['mpi_printer.h',·['../mpi__printer_8h.xhtml',·1,·'']]], | 65 | ····['mpi_5fprinter_2eh_49',·['mpi_printer.h',·['../mpi__printer_8h.xhtml',·1,·'']]], |
66 | ····['mpitest_2ecpp_50',·['mpitest.cpp',·['../mpitest_8cpp.xhtml',·1,·'(Global·Namespace)'], | 66 | ····['mpitest_2ecpp_50',·['mpitest.cpp',·['../mpitest_8cpp.xhtml',·1,·'(Global·Namespace)'], |
67 | ········['../tests_2mpitest_8cpp.xhtml',·1,·'(Global·Namespace)'] | 67 | ········['../tests_2mpitest_8cpp.xhtml',·1,·'(Global·Namespace)'] |
68 | ····]], | 68 | ····]], |
69 | ····['mpitest_2eh_51',·['mpitest.h',·['../mpitest_8h.xhtml',·1,·'']]], | 69 | ····['mpitest_2eh_51',·['mpitest.h',·['../mpitest_8h.xhtml',·1,·'']]], |
70 | ····['mrcdensitymap_2ecpp_52',·['mrcdensitymap.cpp',·['../mrcdensitymap_8cpp.xhtml',·1,·'(Global·Namespace)'], | 70 | ····['mrcdensitymap_2ecpp_52',·['mrcdensitymap.cpp',·['../mrcdensitymap_8cpp.xhtml',·1,·'(Global·Namespace)'], |
71 | ········['../tests_2mrcdensitymap_8cpp.xhtml',·1,·'(Global·Namespace)'] | 71 | ········['../tests_2mrcdensitymap_8cpp.xhtml',·1,·'(Global·Namespace)'] |
72 | ····]], | 72 | ····]], |
73 | ····['mrcdensitymap_2eh_53',·['mrcdensitymap.h',·['../mrcdensitymap_8h.xhtml',·1,·'']]], | 73 | ····['mrcdensitymap_2eh_53',·['mrcdensitymap.h',·['../mrcdensitymap_8h.xhtml',·1,·'']]], |
74 | ····['mrcdensitymapheader_2ecpp_54',·['mrcdensitymapheader.cpp',·['../mrcdensitymapheader_8cpp.xhtml',·1,·'(Global·Namespace)'], | 74 | ····['mrcdensitymapheader_2ecpp_54',·['mrcdensitymapheader.cpp',·['../tests_2mrcdensitymapheader_8cpp.xhtml',·1,·'(Global·Namespace)'], |
75 | ········['../ | 75 | ········['../mrcdensitymapheader_8cpp.xhtml',·1,·'(Global·Namespace)'] |
76 | ····]], | 76 | ····]], |
77 | ····['mrcdensitymapheader_2eh_55',·['mrcdensitymapheader.h',·['../mrcdensitymapheader_8h.xhtml',·1,·'']]], | 77 | ····['mrcdensitymapheader_2eh_55',·['mrcdensitymapheader.h',·['../mrcdensitymapheader_8h.xhtml',·1,·'']]], |
78 | ····['mrcserializer_2ecpp_56',·['mrcserializer.cpp',·['../mrcserializer_8cpp.xhtml',·1,·'(Global·Namespace)'], | 78 | ····['mrcserializer_2ecpp_56',·['mrcserializer.cpp',·['../mrcserializer_8cpp.xhtml',·1,·'(Global·Namespace)'], |
79 | ········['../tests_2mrcserializer_8cpp.xhtml',·1,·'(Global·Namespace)'] | 79 | ········['../tests_2mrcserializer_8cpp.xhtml',·1,·'(Global·Namespace)'] |
80 | ····]], | 80 | ····]], |
81 | ····['mrcserializer_2eh_57',·['mrcserializer.h',·['../mrcserializer_8h.xhtml',·1,·'']]], | 81 | ····['mrcserializer_2eh_57',·['mrcserializer.h',·['../mrcserializer_8h.xhtml',·1,·'']]], |
82 | ····['msd_2ecpp_58',·['msd.cpp',·['../modules_2msd_8cpp.xhtml',·1,·'(Global·Namespace)'], | 82 | ····['msd_2ecpp_58',·['msd.cpp',·['../modules_2msd_8cpp.xhtml',·1,·'(Global·Namespace)'], |
Offset 1, 12 lines modified | Offset 1, 12 lines modified | ||
1 | var·searchData·=·[ | 1 | var·searchData·=·[ |
2 | ····['paddedvector_2ecpp_0',·['paddedvector.cpp',·['../paddedvector_8cpp.xhtml',·1,·'']]], | 2 | ····['paddedvector_2ecpp_0',·['paddedvector.cpp',·['../paddedvector_8cpp.xhtml',·1,·'']]], |
3 | ····['paddedvector_2eh_1',·['paddedvector.h',·['../paddedvector_8h.xhtml',·1,·'']]], | 3 | ····['paddedvector_2eh_1',·['paddedvector.h',·['../paddedvector_8h.xhtml',·1,·'']]], |
4 | ····['pairdist_2ecpp_2',·['pairdist.cpp',·['../ | 4 | ····['pairdist_2ecpp_2',·['pairdist.cpp',·['../tests_2pairdist_8cpp.xhtml',·1,·'(Global·Namespace)'], |
5 | ········['../ | 5 | ········['../modules_2pairdist_8cpp.xhtml',·1,·'(Global·Namespace)'] |
6 | ····]], | 6 | ····]], |
7 | ····['pairdist_2eh_3',·['pairdist.h',·['../pairdist_8h.xhtml',·1,·'']]], | 7 | ····['pairdist_2eh_3',·['pairdist.h',·['../pairdist_8h.xhtml',·1,·'']]], |
8 | ····['pairlist_5fsimd_5f2xmm_2eh_4',·['pairlist_simd_2xmm.h',·['../pairlist__simd__2xmm_8h.xhtml',·1,·'']]], | 8 | ····['pairlist_5fsimd_5f2xmm_2eh_4',·['pairlist_simd_2xmm.h',·['../pairlist__simd__2xmm_8h.xhtml',·1,·'']]], |
9 | ····['pairlist_5fsimd_5f4xm_2eh_5',·['pairlist_simd_4xm.h',·['../pairlist__simd__4xm_8h.xhtml',·1,·'']]], | 9 | ····['pairlist_5fsimd_5f4xm_2eh_5',·['pairlist_simd_4xm.h',·['../pairlist__simd__4xm_8h.xhtml',·1,·'']]], |
10 | ····['pairlist_5ftuning_2ecpp_6',·['pairlist_tuning.cpp',·['../pairlist__tuning_8cpp.xhtml',·1,·'']]], | 10 | ····['pairlist_5ftuning_2ecpp_6',·['pairlist_tuning.cpp',·['../pairlist__tuning_8cpp.xhtml',·1,·'']]], |
11 | ····['pairlist_5ftuning_2eh_7',·['pairlist_tuning.h',·['../pairlist__tuning_8h.xhtml',·1,·'']]], | 11 | ····['pairlist_5ftuning_2eh_7',·['pairlist_tuning.h',·['../pairlist__tuning_8h.xhtml',·1,·'']]], |
12 | ····['pairlistparams_2ecpp_8',·['pairlistparams.cpp',·['../pairlistparams_8cpp.xhtml',·1,·'']]], | 12 | ····['pairlistparams_2ecpp_8',·['pairlistparams.cpp',·['../pairlistparams_8cpp.xhtml',·1,·'']]], |
Offset 29, 20 lines modified | Offset 29, 20 lines modified | ||
29 | ····['parrinellorahmanbarostat_2ecpp_23',·['parrinellorahmanbarostat.cpp',·['../parrinellorahmanbarostat_8cpp.xhtml',·1,·'']]], | 29 | ····['parrinellorahmanbarostat_2ecpp_23',·['parrinellorahmanbarostat.cpp',·['../parrinellorahmanbarostat_8cpp.xhtml',·1,·'']]], |
30 | ····['parrinellorahmanbarostat_2eh_24',·['parrinellorahmanbarostat.h',·['../parrinellorahmanbarostat_8h.xhtml',·1,·'']]], | 30 | ····['parrinellorahmanbarostat_2eh_24',·['parrinellorahmanbarostat.h',·['../parrinellorahmanbarostat_8h.xhtml',·1,·'']]], |
31 | ····['parser_5finternal_2eh_25',·['parser_internal.h',·['../parser__internal_8h.xhtml',·1,·'']]], | 31 | ····['parser_5finternal_2eh_25',·['parser_internal.h',·['../parser__internal_8h.xhtml',·1,·'']]], |
32 | ····['parsetree_2ecpp_26',·['parsetree.cpp',·['../parsetree_8cpp.xhtml',·1,·'']]], | 32 | ····['parsetree_2ecpp_26',·['parsetree.cpp',·['../parsetree_8cpp.xhtml',·1,·'']]], |
33 | ····['parsetree_2eh_27',·['parsetree.h',·['../parsetree_8h.xhtml',·1,·'']]], | 33 | ····['parsetree_2eh_27',·['parsetree.h',·['../parsetree_8h.xhtml',·1,·'']]], |
34 | ····['partition_2ecpp_28',·['partition.cpp',·['../partition_8cpp.xhtml',·1,·'']]], | 34 | ····['partition_2ecpp_28',·['partition.cpp',·['../partition_8cpp.xhtml',·1,·'']]], |
35 | ····['partition_2eh_29',·['partition.h',·['../partition_8h.xhtml',·1,·'']]], | 35 | ····['partition_2eh_29',·['partition.h',·['../partition_8h.xhtml',·1,·'']]], |
36 | ····['path_2ecpp_30',·['path.cpp',·['../ | 36 | ····['path_2ecpp_30',·['path.cpp',·['../path_8cpp.xhtml',·1,·'(Global·Namespace)'], |
37 | ········['../path_8cpp.xhtml',·1,·'(Global·Namespace)'] | 37 | ········['../tests_2path_8cpp.xhtml',·1,·'(Global·Namespace)'] |
38 | ····]], | 38 | ····]], |
39 | ····['path_2eh_31',·['path.h',·['../path_8h.xhtml',·1,·'']]], | 39 | ····['path_2eh_31',·['path.h',·['../path_8h.xhtml',·1,·'']]], |
40 | ····['pbc_2ecpp_32',·['pbc.cpp',·['../ | 40 | ····['pbc_2ecpp_32',·['pbc.cpp',·['../pbc_8cpp.xhtml',·1,·'(Global·Namespace)'], |
41 | ········['../pbc_8cpp.xhtml',·1,·'(Global·Namespace)'] | 41 | ········['../tests_2pbc_8cpp.xhtml',·1,·'(Global·Namespace)'] |
42 | ····]], | 42 | ····]], |
43 | ····['pbc_5faiuc_2eh_33',·['pbc_aiuc.h',·['../pbc__aiuc_8h.xhtml',·1,·'']]], | 43 | ····['pbc_5faiuc_2eh_33',·['pbc_aiuc.h',·['../pbc__aiuc_8h.xhtml',·1,·'']]], |
44 | ····['pbc_5faiuc_5fsycl_2eh_34',·['pbc_aiuc_sycl.h',·['../pbc__aiuc__sycl_8h.xhtml',·1,·'']]], | 44 | ····['pbc_5faiuc_5fsycl_2eh_34',·['pbc_aiuc_sycl.h',·['../pbc__aiuc__sycl_8h.xhtml',·1,·'']]], |
45 | ····['pbc_5fsimd_2ecpp_35',·['pbc_simd.cpp',·['../pbc__simd_8cpp.xhtml',·1,·'']]], | 45 | ····['pbc_5fsimd_2ecpp_35',·['pbc_simd.cpp',·['../pbc__simd_8cpp.xhtml',·1,·'']]], |
46 | ····['pbc_5fsimd_2eh_36',·['pbc_simd.h',·['../pbc__simd_8h.xhtml',·1,·'']]], | 46 | ····['pbc_5fsimd_2eh_36',·['pbc_simd.h',·['../pbc__simd_8h.xhtml',·1,·'']]], |
47 | ····['pbcenums_2ecpp_37',·['pbcenums.cpp',·['../tests_2pbcenums_8cpp.xhtml',·1,·'(Global·Namespace)'], | 47 | ····['pbcenums_2ecpp_37',·['pbcenums.cpp',·['../tests_2pbcenums_8cpp.xhtml',·1,·'(Global·Namespace)'], |
48 | ········['../pbcenums_8cpp.xhtml',·1,·'(Global·Namespace)'] | 48 | ········['../pbcenums_8cpp.xhtml',·1,·'(Global·Namespace)'] |
Offset 59, 16 lines modified | Offset 59, 16 lines modified | ||
59 | ····['pinnedmemorychecker_2ecpp_47',·['pinnedmemorychecker.cpp',·['../pinnedmemorychecker_8cpp.xhtml',·1,·'']]], | 59 | ····['pinnedmemorychecker_2ecpp_47',·['pinnedmemorychecker.cpp',·['../pinnedmemorychecker_8cpp.xhtml',·1,·'']]], |
60 | ····['pleasecite_2eh_48',·['pleasecite.h',·['../pleasecite_8h.xhtml',·1,·'']]], | 60 | ····['pleasecite_2eh_48',·['pleasecite.h',·['../pleasecite_8h.xhtml',·1,·'']]], |
61 | ····['plot_2ecpp_49',·['plot.cpp',·['../plot_8cpp.xhtml',·1,·'']]], | 61 | ····['plot_2ecpp_49',·['plot.cpp',·['../plot_8cpp.xhtml',·1,·'']]], |
62 | ····['plot_2eh_50',·['plot.h',·['../plot_8h.xhtml',·1,·'']]], | 62 | ····['plot_2eh_50',·['plot.h',·['../plot_8h.xhtml',·1,·'']]], |
63 | ····['pmalloc_2ecpp_51',·['pmalloc.cpp',·['../pmalloc_8cpp.xhtml',·1,·'']]], | 63 | ····['pmalloc_2ecpp_51',·['pmalloc.cpp',·['../pmalloc_8cpp.xhtml',·1,·'']]], |
64 | ····['pmalloc_2eh_52',·['pmalloc.h',·['../pmalloc_8h.xhtml',·1,·'']]], | 64 | ····['pmalloc_2eh_52',·['pmalloc.h',·['../pmalloc_8h.xhtml',·1,·'']]], |
65 | ····['pmalloc_5fsycl_2ecpp_53',·['pmalloc_sycl.cpp',·['../pmalloc__sycl_8cpp.xhtml',·1,·'']]], | 65 | ····['pmalloc_5fsycl_2ecpp_53',·['pmalloc_sycl.cpp',·['../pmalloc__sycl_8cpp.xhtml',·1,·'']]], |
66 | ····['pme_2ecpp_54',·['pme.cpp',·['../pme_8cpp.xhtml',·1,·'(Global·Namespace)'], | 66 | ····['pme_2ecpp_54',·['pme.cpp',·['../tests_2pme_8cpp.xhtml',·1,·'(Global·Namespace)'], |
67 | ········['../ | 67 | ········['../pme_8cpp.xhtml',·1,·'(Global·Namespace)'] |
68 | ····]], | 68 | ····]], |
69 | ····['pme_2eh_55',·['pme.h',·['../pme_8h.xhtml',·1,·'']]], | 69 | ····['pme_2eh_55',·['pme.h',·['../pme_8h.xhtml',·1,·'']]], |
70 | ····['pme_5fcoordinate_5freceiver_5fgpu_2eh_56',·['pme_coordinate_receiver_gpu.h',·['../pme__coordinate__receiver__gpu_8h.xhtml',·1,·'']]], | 70 | ····['pme_5fcoordinate_5freceiver_5fgpu_2eh_56',·['pme_coordinate_receiver_gpu.h',·['../pme__coordinate__receiver__gpu_8h.xhtml',·1,·'']]], |
71 | ····['pme_5fcoordinate_5freceiver_5fgpu_5fimpl_2ecpp_57',·['pme_coordinate_receiver_gpu_impl.cpp',·['../pme__coordinate__receiver__gpu__impl_8cpp.xhtml',·1,·'']]], | 71 | ····['pme_5fcoordinate_5freceiver_5fgpu_5fimpl_2ecpp_57',·['pme_coordinate_receiver_gpu_impl.cpp',·['../pme__coordinate__receiver__gpu__impl_8cpp.xhtml',·1,·'']]], |
72 | ····['pme_5fcoordinate_5freceiver_5fgpu_5fimpl_2eh_58',·['pme_coordinate_receiver_gpu_impl.h',·['../pme__coordinate__receiver__gpu__impl_8h.xhtml',·1,·'']]], | 72 | ····['pme_5fcoordinate_5freceiver_5fgpu_5fimpl_2eh_58',·['pme_coordinate_receiver_gpu_impl.h',·['../pme__coordinate__receiver__gpu__impl_8h.xhtml',·1,·'']]], |
73 | ····['pme_5fcoordinate_5freceiver_5fgpu_5fimpl_5fgpu_2ecpp_59',·['pme_coordinate_receiver_gpu_impl_gpu.cpp',·['../pme__coordinate__receiver__gpu__impl__gpu_8cpp.xhtml',·1,·'']]], | 73 | ····['pme_5fcoordinate_5freceiver_5fgpu_5fimpl_5fgpu_2ecpp_59',·['pme_coordinate_receiver_gpu_impl_gpu.cpp',·['../pme__coordinate__receiver__gpu__impl__gpu_8cpp.xhtml',·1,·'']]], |
74 | ····['pme_5fforce_5fsender_5fgpu_2eh_60',·['pme_force_sender_gpu.h',·['../pme__force__sender__gpu_8h.xhtml',·1,·'']]], | 74 | ····['pme_5fforce_5fsender_5fgpu_2eh_60',·['pme_force_sender_gpu.h',·['../pme__force__sender__gpu_8h.xhtml',·1,·'']]], |
Offset 136, 25 lines modified | Offset 136, 25 lines modified | ||
136 | ····['polynomials_2eh_122',·['polynomials.h',·['../polynomials_8h.xhtml',·1,·'']]], | 136 | ····['polynomials_2eh_122',·['polynomials.h',·['../polynomials_8h.xhtml',·1,·'']]], |
137 | ····['poscalc_2ecpp_123',·['poscalc.cpp',·['../poscalc_8cpp.xhtml',·1,·'(Global·Namespace)'], | 137 | ····['poscalc_2ecpp_123',·['poscalc.cpp',·['../poscalc_8cpp.xhtml',·1,·'(Global·Namespace)'], |
138 | ········['../tests_2poscalc_8cpp.xhtml',·1,·'(Global·Namespace)'] | 138 | ········['../tests_2poscalc_8cpp.xhtml',·1,·'(Global·Namespace)'] |
139 | ····]], | 139 | ····]], |
140 | ····['poscalc_2eh_124',·['poscalc.h',·['../poscalc_8h.xhtml',·1,·'']]], | 140 | ····['poscalc_2eh_124',·['poscalc.h',·['../poscalc_8h.xhtml',·1,·'']]], |
141 | ····['position_2ecpp_125',·['position.cpp',·['../position_8cpp.xhtml',·1,·'']]], | 141 | ····['position_2ecpp_125',·['position.cpp',·['../position_8cpp.xhtml',·1,·'']]], |
142 | ····['position_2eh_126',·['position.h',·['../position_8h.xhtml',·1,·'']]], | 142 | ····['position_2eh_126',·['position.h',·['../position_8h.xhtml',·1,·'']]], |
143 | ····['position_5frestraints_2ecpp_127',·['position_restraints.cpp',·['../ | 143 | ····['position_5frestraints_2ecpp_127',·['position_restraints.cpp',·['../position__restraints_8cpp.xhtml',·1,·'(Global·Namespace)'], |
144 | ········['../position__restraints_8cpp.xhtml',·1,·'(Global·Namespace)'] | 144 | ········['../tests_2position__restraints_8cpp.xhtml',·1,·'(Global·Namespace)'] |
145 | ····]], | 145 | ····]], |
146 | ····['position_5frestraints_2eh_128',·['position_restraints.h',·['../position__restraints_8h.xhtml',·1,·'']]], | 146 | ····['position_5frestraints_2eh_128',·['position_restraints.h',·['../position__restraints_8h.xhtml',·1,·'']]], |
147 | ····['printtime_2eh_129',·['printtime.h',·['../printtime_8h.xhtml',·1,·'']]], | 147 | ····['printtime_2eh_129',·['printtime.h',·['../printtime_8h.xhtml',·1,·'']]], |
148 | ····['programcontext_2ecpp_130',·['programcontext.cpp',·['../programcontext_8cpp.xhtml',·1,·'']]], | 148 | ····['programcontext_2ecpp_130',·['programcontext.cpp',·['../programcontext_8cpp.xhtml',·1,·'']]], |
149 | ····['programcontext_2eh_131',·['programcontext.h',·['../programcontext_8h.xhtml',·1,·'']]], | 149 | ····['programcontext_2eh_131',·['programcontext.h',·['../programcontext_8h.xhtml',·1,·'']]], |
150 | ····['propagator_2ecpp_132',·['propagator.cpp',·['../propagator_8cpp.xhtml',·1,·'']]], | 150 | ····['propagator_2ecpp_132',·['propagator.cpp',·['../propagator_8cpp.xhtml',·1,·'']]], |
151 | ····['propagator_2eh_133',·['propagator.h',·['../propagator_8h.xhtml',·1,·'']]], | 151 | ····['propagator_2eh_133',·['propagator.h',·['../propagator_8h.xhtml',·1,·'']]], |
152 | ····['pull_2ecpp_134',·['pull.cpp',·['../ | 152 | ····['pull_2ecpp_134',·['pull.cpp',·['../gromacs_2pulling_2tests_2pull_8cpp.xhtml',·1,·'(Global·Namespace)'], |
153 | ········['../ | 153 | ········['../programs_2mdrun_2tests_2pull_8cpp.xhtml',·1,·'(Global·Namespace)'] |
154 | ····]], | 154 | ····]], |
155 | ····['pull_2eh_135',·['pull.h',·['../pull_8h.xhtml',·1,·'']]], | 155 | ····['pull_2eh_135',·['pull.h',·['../pull_8h.xhtml',·1,·'']]], |
156 | ····['pull_5finternal_2eh_136',·['pull_internal.h',·['../pull__internal_8h.xhtml',·1,·'']]], | 156 | ····['pull_5finternal_2eh_136',·['pull_internal.h',·['../pull__internal_8h.xhtml',·1,·'']]], |
157 | ····['pull_5fparams_2eh_137',·['pull_params.h',·['../pull__params_8h.xhtml',·1,·'']]], | 157 | ····['pull_5fparams_2eh_137',·['pull_params.h',·['../pull__params_8h.xhtml',·1,·'']]], |
158 | ····['pull_5frotation_2ecpp_138',·['pull_rotation.cpp',·['../programs_2mdrun_2tests_2pull__rotation_8cpp.xhtml',·1,·'']]], | 158 | ····['pull_5frotation_2ecpp_138',·['pull_rotation.cpp',·['../programs_2mdrun_2tests_2pull__rotation_8cpp.xhtml',·1,·'']]], |
159 | ····['pull_5frotation_2eh_139',·['pull_rotation.h',·['../pull__rotation_8h.xhtml',·1,·'']]], | 159 | ····['pull_5frotation_2eh_139',·['pull_rotation.h',·['../pull__rotation_8h.xhtml',·1,·'']]], |
160 | ····['pullcoordexpressionparser_2eh_140',·['pullcoordexpressionparser.h',·['../pullcoordexpressionparser_8h.xhtml',·1,·'']]], | 160 | ····['pullcoordexpressionparser_2eh_140',·['pullcoordexpressionparser.h',·['../pullcoordexpressionparser_8h.xhtml',·1,·'']]], |
Offset 1, 14 lines modified | Offset 1, 14 lines modified | ||
1 | var·searchData·=·[ | 1 | var·searchData·=·[ |
2 | ····['qmmm_2ecpp_0',·['qmmm.cpp',·['../tests_2qmmm_8cpp.xhtml',·1,·'(Global·Namespace)'], | 2 | ····['qmmm_2ecpp_0',·['qmmm.cpp',·['../tests_2qmmm_8cpp.xhtml',·1,·'(Global·Namespace)'], |
3 | ········['../qmmm_8cpp.xhtml',·1,·'(Global·Namespace)'] | 3 | ········['../qmmm_8cpp.xhtml',·1,·'(Global·Namespace)'] |
4 | ····]], | 4 | ····]], |
5 | ····['qmmm_2eh_1',·['qmmm.h',·['../qmmm_8h.xhtml',·1,·'']]], | 5 | ····['qmmm_2eh_1',·['qmmm.h',·['../qmmm_8h.xhtml',·1,·'']]], |
6 | ····['qmmmforceprovider_2ecpp_2',·['qmmmforceprovider.cpp',·['../qmmmforceprovider_8cpp.xhtml',·1,·'(Global·Namespace)'], | 6 | ····['qmmmforceprovider_2ecpp_2',·['qmmmforceprovider.cpp',·['../tests_2qmmmforceprovider_8cpp.xhtml',·1,·'(Global·Namespace)'], |
7 | ········['../ | 7 | ········['../qmmmforceprovider_8cpp.xhtml',·1,·'(Global·Namespace)'] |
8 | ····]], | 8 | ····]], |
9 | ····['qmmmforceprovider_2eh_3',·['qmmmforceprovider.h',·['../qmmmforceprovider_8h.xhtml',·1,·'']]], | 9 | ····['qmmmforceprovider_2eh_3',·['qmmmforceprovider.h',·['../qmmmforceprovider_8h.xhtml',·1,·'']]], |
10 | ····['qmmmforceprovider_5fstub_2ecpp_4',·['qmmmforceprovider_stub.cpp',·['../qmmmforceprovider__stub_8cpp.xhtml',·1,·'']]], | 10 | ····['qmmmforceprovider_5fstub_2ecpp_4',·['qmmmforceprovider_stub.cpp',·['../qmmmforceprovider__stub_8cpp.xhtml',·1,·'']]], |
11 | ····['qmmminputgenerator_2ecpp_5',·['qmmminputgenerator.cpp',·['../qmmminputgenerator_8cpp.xhtml',·1,·'(Global·Namespace)'], | 11 | ····['qmmminputgenerator_2ecpp_5',·['qmmminputgenerator.cpp',·['../qmmminputgenerator_8cpp.xhtml',·1,·'(Global·Namespace)'], |
12 | ········['../tests_2qmmminputgenerator_8cpp.xhtml',·1,·'(Global·Namespace)'] | 12 | ········['../tests_2qmmminputgenerator_8cpp.xhtml',·1,·'(Global·Namespace)'] |
13 | ····]], | 13 | ····]], |
14 | ····['qmmminputgenerator_2eh_6',·['qmmminputgenerator.h',·['../qmmminputgenerator_8h.xhtml',·1,·'']]], | 14 | ····['qmmminputgenerator_2eh_6',·['qmmminputgenerator.h',·['../qmmminputgenerator_8h.xhtml',·1,·'']]], |
Offset 475, 15 lines modified | Offset 475, 15 lines modified | ||
475 | <dd><p·class="startdd"><a·class="anchor"·id="_todo000273"></a>Eventually·t_trxframe·should·be·replaced·by·a·class·such·as·this.·Currently·we·need·to·introduce·BoxMatrix·so·that·we·can·have·a·normal·C++·getter·that·returns·the·contents·of·a·box·matrix,·since·you·cannot·use·a·real[DIM][DIM]·as·a·function·return·type.</p> | 475 | <dd><p·class="startdd"><a·class="anchor"·id="_todo000273"></a>Eventually·t_trxframe·should·be·replaced·by·a·class·such·as·this.·Currently·we·need·to·introduce·BoxMatrix·so·that·we·can·have·a·normal·C++·getter·that·returns·the·contents·of·a·box·matrix,·since·you·cannot·use·a·real[DIM][DIM]·as·a·function·return·type.</p> |
476 | <p·class="enddd"><a·class="anchor"·id="_todo000274"></a>Consider·a·std::optional·work-alike·type·for·expressing·that·a·field·may·or·may·not·have·content.··</p> | 476 | <p·class="enddd"><a·class="anchor"·id="_todo000274"></a>Consider·a·std::optional·work-alike·type·for·expressing·that·a·field·may·or·may·not·have·content.··</p> |
477 | </dd> | 477 | </dd> |
478 | <dt>Struct·<a·class="el"·href="structgmx__hw__opt__t.xhtml">gmx_hw_opt_t</a>··</dt> | 478 | <dt>Struct·<a·class="el"·href="structgmx__hw__opt__t.xhtml">gmx_hw_opt_t</a>··</dt> |
479 | <dd><a·class="anchor"·id="_todo000067"></a>During·mdrunner(),·if·the·user·has·left·any·of·these·values·at·their·defaults·(which·tends·to·mean·"choose·automatically"),·then·those·values·are·over-written·with·the·result·of·such·automation.·This·creates·problems·for·the·subsequent·code·in·knowing·what·was·done,·why,·and·reporting·correctly·to·the·user.·Find·a·way·to·improve·this.··</dd> | 479 | <dd><a·class="anchor"·id="_todo000067"></a>During·mdrunner(),·if·the·user·has·left·any·of·these·values·at·their·defaults·(which·tends·to·mean·"choose·automatically"),·then·those·values·are·over-written·with·the·result·of·such·automation.·This·creates·problems·for·the·subsequent·code·in·knowing·what·was·done,·why,·and·reporting·correctly·to·the·user.·Find·a·way·to·improve·this.··</dd> |
480 | <dt>Struct·<a·class="el"·href="structgmx__multisim__t.xhtml">gmx_multisim_t</a>··</dt> | 480 | <dt>Struct·<a·class="el"·href="structgmx__multisim__t.xhtml">gmx_multisim_t</a>··</dt> |
481 | <dd><a·class="anchor"·id="_todo000154"></a>Change·this·to·class··</dd> | 481 | <dd><a·class="anchor"·id="_todo000154"></a>Change·this·to·class··</dd> |
482 | <dt>Member·<a·class="el"·href="pme_8 | 482 | <dt>Member·<a·class="el"·href="pme_8cpp.xhtml#adc07e6be8d5225d0d192c27ccc474124">gmx_pme_init</a>··(const·t_commrec·*cr,·const·<a·class="el"·href="structNumPmeDomains.xhtml"·title="Struct·for·passing·around·the·number·of·PME·domains.">NumPmeDomains</a>·&numPmeDomains,·const·t_inputrec·*ir,·const·matrix·box,·real·haloExtentForAtomDisplacement,·gmx_bool·bFreeEnergy_q,·gmx_bool·bFreeEnergy_lj,·gmx_bool·bReproducible,·real·ewaldcoeff_q,·real·ewaldcoeff_lj,·int·nthread,·PmeRunMode·runMode,·<a·class="el"·href="structPmeGpu.xhtml"·title="The·main·PME·GPU·host·structure,·included·in·the·PME·CPU·structure·by·pointer.">PmeGpu</a>·*pmeGpu,·const·DeviceContext·*deviceContext,·const·<a·class="el"·href="classDeviceStream.xhtml"·title="Declaration·of·platform-agnostic·device·stream/queue.">DeviceStream</a>·*deviceStream,·const·<a·class="el"·href="classPmeGpuProgram.xhtml"·title="Stores·PME·data·derived·from·the·GPU·context·or·devices.">PmeGpuProgram</a>·*pmeGpuProgram,·const·<a·class="el"·href="classgmx_1_1MDLogger.xhtml"·title="Declares·a·logging·interface.">gmx::MDLogger</a>·&mdlog)</dt> |
483 | <dd><a·class="anchor"·id="_todo000026"></a>We·should·evolve·something·like·a·<code>GpuManager</code>·that·holds·<code>DeviceInformation*</code>·and·<code>PmeGpuProgram*</code>·and·perhaps·other·related·things·whose·lifetime·can/should·exceed·that·of·a·task·(or·perhaps·task·manager).·See·Issue·#2522.··</dd> | 483 | <dd><a·class="anchor"·id="_todo000026"></a>We·should·evolve·something·like·a·<code>GpuManager</code>·that·holds·<code>DeviceInformation*</code>·and·<code>PmeGpuProgram*</code>·and·perhaps·other·related·things·whose·lifetime·can/should·exceed·that·of·a·task·(or·perhaps·task·manager).·See·Issue·#2522.··</dd> |
484 | <dt>Member·<a·class="el"·href="group__module__utility.xhtml#ga33e34477bae2bbb86c4d9af1823e3fd0">GMX_UNUSED_VALUE</a>··(value)</dt> | 484 | <dt>Member·<a·class="el"·href="group__module__utility.xhtml#ga33e34477bae2bbb86c4d9af1823e3fd0">GMX_UNUSED_VALUE</a>··(value)</dt> |
485 | <dd><a·class="anchor"·id="_todo000280"></a>Deprecated·-·use·gmx_unused··</dd> | 485 | <dd><a·class="anchor"·id="_todo000280"></a>Deprecated·-·use·gmx_unused··</dd> |
486 | <dt>File·<a·class="el"·href="programs_2mdrun_2tests_2grompp_8cpp.xhtml">grompp.cpp</a>··</dt> | 486 | <dt>File·<a·class="el"·href="programs_2mdrun_2tests_2grompp_8cpp.xhtml">grompp.cpp</a>··</dt> |
487 | <dd><a·class="anchor"·id="_todo000236"></a>Refactor·SimulationRunner·to·split·off·SimulationPreparer,·so·that·integration·tests·of·grompp·can·stand·apart·from·tests·of·mdrun.·</dd> | 487 | <dd><a·class="anchor"·id="_todo000236"></a>Refactor·SimulationRunner·to·split·off·SimulationPreparer,·so·that·integration·tests·of·grompp·can·stand·apart·from·tests·of·mdrun.·</dd> |
488 | <dt>File·<a·class="el"·href="haloexchange__mpi_8cpp.xhtml">haloexchange_mpi.cpp</a>··</dt> | 488 | <dt>File·<a·class="el"·href="haloexchange__mpi_8cpp.xhtml">haloexchange_mpi.cpp</a>··</dt> |
489 | <dd><a·class="anchor"·id="_todo000022"></a>Add·3D·case·</dd> | 489 | <dd><a·class="anchor"·id="_todo000022"></a>Add·3D·case·</dd> |
Offset 563, 15 lines modified | Offset 563, 15 lines modified | ||
563 | <dd><a·class="anchor"·id="_todo000034"></a>Some·renaming/refactoring,·which·does·not·impair·the·performance:·–·<a·class="el"·href="structPmeGpuSettings.xhtml"·title="The·PME·GPU·settings·structure,·included·in·the·main·PME·GPU·structure·by·value.">PmeGpuSettings</a>·->·PmeGpuTasks·</dd> | 563 | <dd><a·class="anchor"·id="_todo000034"></a>Some·renaming/refactoring,·which·does·not·impair·the·performance:·–·<a·class="el"·href="structPmeGpuSettings.xhtml"·title="The·PME·GPU·settings·structure,·included·in·the·main·PME·GPU·structure·by·value.">PmeGpuSettings</a>·->·PmeGpuTasks·</dd> |
564 | <dt>File·<a·class="el"·href="pme__gpu__staging_8h.xhtml">pme_gpu_staging.h</a>··</dt> | 564 | <dt>File·<a·class="el"·href="pme__gpu__staging_8h.xhtml">pme_gpu_staging.h</a>··</dt> |
565 | <dd><a·class="anchor"·id="_todo000035"></a>Some·renaming/refactoring,·which·does·not·impair·the·performance:·–·bringing·the·function·names·up·to·guidelines·–·<a·class="el"·href="structPmeGpuSettings.xhtml"·title="The·PME·GPU·settings·structure,·included·in·the·main·PME·GPU·structure·by·value.">PmeGpuSettings</a>·->·PmeGpuTasks·–·refining·GPU·notation·application·(#2053)·–·renaming·coefficients·to·charges·(?)·</dd> | 565 | <dd><a·class="anchor"·id="_todo000035"></a>Some·renaming/refactoring,·which·does·not·impair·the·performance:·–·bringing·the·function·names·up·to·guidelines·–·<a·class="el"·href="structPmeGpuSettings.xhtml"·title="The·PME·GPU·settings·structure,·included·in·the·main·PME·GPU·structure·by·value.">PmeGpuSettings</a>·->·PmeGpuTasks·–·refining·GPU·notation·application·(#2053)·–·renaming·coefficients·to·charges·(?)·</dd> |
566 | <dt>Member·<a·class="el"·href="pme_8h.xhtml#a9faddde52f5a636410141f52cc95d3e1">pme_gpu_task_enabled</a>··(const·gmx_pme_t·*pme)</dt> | 566 | <dt>Member·<a·class="el"·href="pme_8h.xhtml#a9faddde52f5a636410141f52cc95d3e1">pme_gpu_task_enabled</a>··(const·gmx_pme_t·*pme)</dt> |
567 | <dd><a·class="anchor"·id="_todo000028"></a>This·is·a·rather·static·data·that·should·be·managed·by·the·hardware·assignment·manager.·For·now,·it·is·synonymous·with·the·active·PME·codepath·(in·the·absence·of·dynamic·switching).·</dd> | 567 | <dd><a·class="anchor"·id="_todo000028"></a>This·is·a·rather·static·data·that·should·be·managed·by·the·hardware·assignment·manager.·For·now,·it·is·synonymous·with·the·active·PME·codepath·(in·the·absence·of·dynamic·switching).·</dd> |
568 | <dt>File·<a·class="el"·href="pme__gpu__types__host_8h.xhtml">pme_gpu_types_host.h</a>··</dt> | 568 | <dt>File·<a·class="el"·href="pme__gpu__types__host_8h.xhtml">pme_gpu_types_host.h</a>··</dt> |
569 | <dd><a·class="anchor"·id="_todo000036"></a>Some·renaming/refactoring,·which·does·not·impair·the·performance:·–·bringing·the·function·names·up·to·guidelines·–·<a·class="el"·href="structPmeGpuSettings.xhtml"·title="The·PME·GPU·settings·structure,·included·in·the·main·PME·GPU·structure·by·value.">PmeGpuSettings</a>·->·PmeGpuTasks·–·refining·GPU·notation·application·(#2053)·–·renaming·coefficients·to·charges·(?)·</dd> | 569 | <dd><a·class="anchor"·id="_todo000036"></a>Some·renaming/refactoring,·which·does·not·impair·the·performance:·–·bringing·the·function·names·up·to·guidelines·–·<a·class="el"·href="structPmeGpuSettings.xhtml"·title="The·PME·GPU·settings·structure,·included·in·the·main·PME·GPU·structure·by·value.">PmeGpuSettings</a>·->·PmeGpuTasks·–·refining·GPU·notation·application·(#2053)·–·renaming·coefficients·to·charges·(?)·</dd> |
570 | <dt>Member·<a·class="el"·href="pme_8 | 570 | <dt>Member·<a·class="el"·href="pme_8cpp.xhtml#a9cfbe9fa691aabaf1a9e10fa06858c96">pme_run_mode</a>··(const·gmx_pme_t·*pme)</dt> |
571 | <dd><a·class="anchor"·id="_todo000027"></a>This·is·a·rather·static·data·that·should·be·managed·by·the·higher·level·task·scheduler.·</dd> | 571 | <dd><a·class="anchor"·id="_todo000027"></a>This·is·a·rather·static·data·that·should·be·managed·by·the·higher·level·task·scheduler.·</dd> |
572 | <dt>Member·<a·class="el"·href="structPmeGpu.xhtml#a592a545094c1ba0847e5e5223c981cc9">PmeGpu::kernelParams</a>··</dt> | 572 | <dt>Member·<a·class="el"·href="structPmeGpu.xhtml#a592a545094c1ba0847e5e5223c981cc9">PmeGpu::kernelParams</a>··</dt> |
573 | <dd><a·class="anchor"·id="_todo000038"></a>Test·whether·this·should·be·copied·to·the·constant·GPU·memory·once·for·each·computation·(or·even·less·often·with·no·box·updates)·instead·of·being·an·argument.··</dd> | 573 | <dd><a·class="anchor"·id="_todo000038"></a>Test·whether·this·should·be·copied·to·the·constant·GPU·memory·once·for·each·computation·(or·even·less·often·with·no·box·updates)·instead·of·being·an·argument.··</dd> |
574 | <dt>Struct·<a·class="el"·href="structPmeGpuProgramImpl.xhtml">PmeGpuProgramImpl</a>··</dt> | 574 | <dt>Struct·<a·class="el"·href="structPmeGpuProgramImpl.xhtml">PmeGpuProgramImpl</a>··</dt> |
575 | <dd><a·class="anchor"·id="_todo000033"></a>In·future·if·we·would·need·to·react·to·either·user·input·or·auto-tuning·to·compile·different·kernels,·then·we·might·wish·to·revisit·the·number·of·kernels·we·pre-compile,·and/or·the·management·of·their·lifetime.·</dd> | 575 | <dd><a·class="anchor"·id="_todo000033"></a>In·future·if·we·would·need·to·react·to·either·user·input·or·auto-tuning·to·compile·different·kernels,·then·we·might·wish·to·revisit·the·number·of·kernels·we·pre-compile,·and/or·the·management·of·their·lifetime.·</dd> |
576 | <dt>Member·<a·class="el"·href="pme_8h.xhtml#adc082ed1af9a4868af13352373ed3791">PmeRunMode</a>··</dt> | 576 | <dt>Member·<a·class="el"·href="pme_8h.xhtml#adc082ed1af9a4868af13352373ed3791">PmeRunMode</a>··</dt> |
577 | <dd><a·class="anchor"·id="_todo000025"></a>:·make·this·enum·class·with·gmx_pme_t·C++·refactoring··</dd> | 577 | <dd><a·class="anchor"·id="_todo000025"></a>:·make·this·enum·class·with·gmx_pme_t·C++·refactoring··</dd> |
Offset 549, 16 lines modified | Offset 549, 16 lines modified | ||
549 | ····['simd_20preprocessor_20macros_352',·['Predefined·SIMD·preprocessor·macros',·['../page_simd.xhtml#autotoc_md66',·1,·'']]], | 549 | ····['simd_20preprocessor_20macros_352',·['Predefined·SIMD·preprocessor·macros',·['../page_simd.xhtml#autotoc_md66',·1,·'']]], |
550 | ····['simd_2eh_353',·['simd.h',·['../include_2gromacs_2simd_2simd_8h.xhtml',·1,·'']]], | 550 | ····['simd_2eh_353',·['simd.h',·['../include_2gromacs_2simd_2simd_8h.xhtml',·1,·'']]], |
551 | ····['simd4_20implementation_354',·['SIMD4·implementation',·['../page_simd.xhtml#autotoc_md64',·1,·'']]], | 551 | ····['simd4_20implementation_354',·['SIMD4·implementation',·['../page_simd.xhtml#autotoc_md64',·1,·'']]], |
552 | ····['simd4bool_355',·['Simd4Bool',·['../namespacegmx.xhtml#acb6a84be080be397c2c09cda9f315037',·1,·'gmx']]], | 552 | ····['simd4bool_355',·['Simd4Bool',·['../namespacegmx.xhtml#acb6a84be080be397c2c09cda9f315037',·1,·'gmx']]], |
553 | ····['simd4dbool_356',·['simd4dbool',·['../classgmx_1_1Simd4DBool.xhtml#a428de6b27a42a06dd0fd632660b3ae9d',·1,·'gmx::Simd4DBool::Simd4DBool()'], | 553 | ····['simd4dbool_356',·['simd4dbool',·['../classgmx_1_1Simd4DBool.xhtml#a428de6b27a42a06dd0fd632660b3ae9d',·1,·'gmx::Simd4DBool::Simd4DBool()'], |
554 | ········['../classgmx_1_1Simd4DBool.xhtml',·1,·'gmx::Simd4DBool'] | 554 | ········['../classgmx_1_1Simd4DBool.xhtml',·1,·'gmx::Simd4DBool'] |
555 | ····]], | 555 | ····]], |
556 | ····['simd4double_357',·['simd4double',·['../classgmx_1_1Simd4Double.xhtml',·1,·'gmx::Simd4Double'], | ||
556 | ···· | 557 | ········['../classgmx_1_1Simd4Double.xhtml#a92931f93554548894cd5daa60af49525',·1,·'gmx::Simd4Double::Simd4Double()'] |
557 | ········['../classgmx_1_1Simd4Double.xhtml',·1,·'gmx::Simd4Double'] | ||
558 | ····]], | 558 | ····]], |
559 | ····['simd4fbool_358',·['simd4fbool',·['../classgmx_1_1Simd4FBool.xhtml#ad64754cbb774d9cab1ed08c49a6e28bc',·1,·'gmx::Simd4FBool::Simd4FBool()'], | 559 | ····['simd4fbool_358',·['simd4fbool',·['../classgmx_1_1Simd4FBool.xhtml#ad64754cbb774d9cab1ed08c49a6e28bc',·1,·'gmx::Simd4FBool::Simd4FBool()'], |
560 | ········['../classgmx_1_1Simd4FBool.xhtml',·1,·'gmx::Simd4FBool'] | 560 | ········['../classgmx_1_1Simd4FBool.xhtml',·1,·'gmx::Simd4FBool'] |
561 | ····]], | 561 | ····]], |
562 | ····['simd4float_359',·['simd4float',·['../classgmx_1_1Simd4Float.xhtml#a4d61d22b9955c0f6fa78804562704cbe',·1,·'gmx::Simd4Float::Simd4Float()'], | 562 | ····['simd4float_359',·['simd4float',·['../classgmx_1_1Simd4Float.xhtml#a4d61d22b9955c0f6fa78804562704cbe',·1,·'gmx::Simd4Float::Simd4Float()'], |
563 | ········['../classgmx_1_1Simd4Float.xhtml',·1,·'gmx::Simd4Float'] | 563 | ········['../classgmx_1_1Simd4Float.xhtml',·1,·'gmx::Simd4Float'] |
564 | ····]], | 564 | ····]], |
Offset 24, 26 lines modified | Offset 24, 26 lines modified | ||
24 | ····['unitcellistriclinic_16',·['UnitCellIsTriclinic',·['../group__module__coordinateio.xhtml#ggae520b2721d9d5166e7c015b2654bd1d9a99285c8187fb87e756f127435045dc3f',·1,·'gmx']]], | 24 | ····['unitcellistriclinic_16',·['UnitCellIsTriclinic',·['../group__module__coordinateio.xhtml#ggae520b2721d9d5166e7c015b2654bd1d9a99285c8187fb87e756f127435045dc3f',·1,·'gmx']]], |
25 | ····['unitcelltype_17',·['UnitCellType',·['../namespacegmx.xhtml#af897bff42be729e6eaf3c4dc6e199722',·1,·'gmx']]], | 25 | ····['unitcelltype_17',·['UnitCellType',·['../namespacegmx.xhtml#af897bff42be729e6eaf3c4dc6e199722',·1,·'gmx']]], |
26 | ····['unitcelltypenames_18',·['unitCellTypeNames',·['../namespacegmx.xhtml#ae81efb97e81499b750d906d26a29ce18',·1,·'gmx']]], | 26 | ····['unitcelltypenames_18',·['unitCellTypeNames',·['../namespacegmx.xhtml#ae81efb97e81499b750d906d26a29ce18',·1,·'gmx']]], |
27 | ····['unitvector_19',·['unitvector',·['../namespacegmx.xhtml#a5bc71ede59923e4d25b11a995139970a',·1,·'gmx::unitVector()'], | 27 | ····['unitvector_19',·['unitvector',·['../namespacegmx.xhtml#a5bc71ede59923e4d25b11a995139970a',·1,·'gmx::unitVector()'], |
28 | ········['../classgmx_1_1BasicVector.xhtml#a4e7218ba6cbb3bc735e31a43597ec7a9',·1,·'gmx::BasicVector::unitVector()'] | 28 | ········['../classgmx_1_1BasicVector.xhtml#a4e7218ba6cbb3bc735e31a43597ec7a9',·1,·'gmx::BasicVector::unitVector()'] |
29 | ····]], | 29 | ····]], |
30 | ····['unity_20',·['Unity',·['../namespacegmx.xhtml#ab0ad78613a262a1d4fcce5d18525099fa82dd98f1d663acc318e6a8ec4ab69b7a',·1,·'gmx']]], | 30 | ····['unity_20',·['Unity',·['../namespacegmx.xhtml#ab0ad78613a262a1d4fcce5d18525099fa82dd98f1d663acc318e6a8ec4ab69b7a',·1,·'gmx']]], |
31 | ····['unknown_21',·['unknown',·['../namespacegmx.xhtml#a20e189e3f31f5f1e8581a5cc84063453a88183b946cc5f0e8c96b2e66e1c74a7e',·1,·'gmx::Unknown'], | ||
32 | ····· | 31 | ····['unknown_21',·['unknown',·['../device__information_8h.xhtml#a5514710e3c78d4816da9e8d2e3cd508ca88183b946cc5f0e8c96b2e66e1c74a7e',·1,·'Unknown: device_information.h'], |
32 | ········['../namespacegmx.xhtml#a20e189e3f31f5f1e8581a5cc84063453a88183b946cc5f0e8c96b2e66e1c74a7e',·1,·'gmx::Unknown'], | ||
33 | ········['../classgmx_1_1CpuInfo.xhtml#acd7ff27553f3ff9fd1037c30c21a24f1a88183b946cc5f0e8c96b2e66e1c74a7e',·1,·'gmx::CpuInfo::Unknown'] | 33 | ········['../classgmx_1_1CpuInfo.xhtml#acd7ff27553f3ff9fd1037c30c21a24f1a88183b946cc5f0e8c96b2e66e1c74a7e',·1,·'gmx::CpuInfo::Unknown'] |
34 | ····]], | 34 | ····]], |
35 | ····['unpackrecvbufkernel_22',·['unpackRecvBufKernel',·['../namespacegmx.xhtml#a704128fa72f8ce7dcf08d0063a166036',·1,·'gmx']]], | 35 | ····['unpackrecvbufkernel_22',·['unpackRecvBufKernel',·['../namespacegmx.xhtml#a704128fa72f8ce7dcf08d0063a166036',·1,·'gmx']]], |
36 | ····['unpaddedarrayref_23',·['unpaddedArrayRef',·['../classgmx_1_1ArrayRefWithPadding.xhtml#ad5b878ca7749f5b8f52e006269fbfc2f',·1,·'gmx::ArrayRefWithPadding']]], | 36 | ····['unpaddedarrayref_23',·['unpaddedArrayRef',·['../classgmx_1_1ArrayRefWithPadding.xhtml#ad5b878ca7749f5b8f52e006269fbfc2f',·1,·'gmx::ArrayRefWithPadding']]], |
37 | ····['unpaddedconstarrayref_24',·['unpaddedConstArrayRef',·['../classgmx_1_1ArrayRefWithPadding.xhtml#a2c3f73497c6bc71264ae1af84b6522ae',·1,·'gmx::ArrayRefWithPadding']]], | 37 | ····['unpaddedconstarrayref_24',·['unpaddedConstArrayRef',·['../classgmx_1_1ArrayRefWithPadding.xhtml#a2c3f73497c6bc71264ae1af84b6522ae',·1,·'gmx::ArrayRefWithPadding']]], |
38 | ····['unset_25',·['Unset',·['../md__enums_8h.xhtml#a1df3eedfba9424ae3e518284a453d95cac9f88e098f6fe4e4e112eeb05ccb9671',·1,·'md_enums.h']]], | 38 | ····['unset_25',·['Unset',·['../md__enums_8h.xhtml#a1df3eedfba9424ae3e518284a453d95cac9f88e098f6fe4e4e112eeb05ccb9671',·1,·'md_enums.h']]], |
39 | ····['unsignedchartostring_26',·['unsignedCharToString',·['../group__module__utility.xhtml#ga78b462191d8dbe81225e12d64cdd55a3',·1,·'gmx']]], | 39 | ····['unsignedchartostring_26',·['unsignedCharToString',·['../group__module__utility.xhtml#ga78b462191d8dbe81225e12d64cdd55a3',·1,·'gmx']]], |
40 | ····['update_27',·['update',·['../classgmx_1_1IRestraintPotential.xhtml#a6bc44212f005dbc7a03acf9a76b1074d',·1,·'gmx::IRestraintPotential::update()'], | 40 | ····['update_27',·['update',·['../classgmx_1_1IRestraintPotential.xhtml#a6bc44212f005dbc7a03acf9a76b1074d',·1,·'gmx::IRestraintPotential::update()'], |
41 | ········['../classgmx_1_1Update.xhtml',·1,·'gmx::Update'], | ||
42 | ········['../classgmx_1_1Update.xhtml#afcb4065ad13efba2d3aa9b5225125e6f',·1,·'gmx::Update::Update()'] | 41 | ········['../classgmx_1_1Update.xhtml#afcb4065ad13efba2d3aa9b5225125e6f',·1,·'gmx::Update::Update()'], |
42 | ········['../classgmx_1_1Update.xhtml',·1,·'gmx::Update'] | ||
43 | ····]], | 43 | ····]], |
44 | ····['update_5fconstrain_5fgpu_2eh_28',·['update_constrain_gpu.h',·['../update__constrain__gpu_8h.xhtml',·1,·'']]], | 44 | ····['update_5fconstrain_5fgpu_2eh_28',·['update_constrain_gpu.h',·['../update__constrain__gpu_8h.xhtml',·1,·'']]], |
45 | ····['update_5fcoords_29',·['update_coords',·['../classgmx_1_1Update.xhtml#a07bb5e84363cbcb95a10bc97647526e9',·1,·'gmx::Update']]], | 45 | ····['update_5fcoords_29',·['update_coords',·['../classgmx_1_1Update.xhtml#a07bb5e84363cbcb95a10bc97647526e9',·1,·'gmx::Update']]], |
46 | ····['update_5fdisres_5fhistory_30',·['update_disres_history',·['../disre_8h.xhtml#a80a6326aadca6d0b6f6f4753e63648e7',·1,·'disre.cpp']]], | 46 | ····['update_5fdisres_5fhistory_30',·['update_disres_history',·['../disre_8h.xhtml#a80a6326aadca6d0b6f6f4753e63648e7',·1,·'disre.cpp']]], |
47 | ····['update_5ffor_5fconstraint_5fvirial_31',·['update_for_constraint_virial',·['../classgmx_1_1Update.xhtml#acbd679269aa6945d6922c029770e8a84',·1,·'gmx::Update']]], | 47 | ····['update_5ffor_5fconstraint_5fvirial_31',·['update_for_constraint_virial',·['../classgmx_1_1Update.xhtml#acbd679269aa6945d6922c029770e8a84',·1,·'gmx::Update']]], |
48 | ····['update_5fsd_5fsecond_5fhalf_32',·['update_sd_second_half',·['../classgmx_1_1Update.xhtml#ab0206e61c30553bd8aa268891c466509',·1,·'gmx::Update']]], | 48 | ····['update_5fsd_5fsecond_5fhalf_32',·['update_sd_second_half',·['../classgmx_1_1Update.xhtml#ab0206e61c30553bd8aa268891c466509',·1,·'gmx::Update']]], |
49 | ····['update_5ftemperature_5fconstants_33',·['update_temperature_constants',·['../classgmx_1_1Update.xhtml#afa5d8919006df7093a2224fbc2f9fd4c',·1,·'gmx::Update']]], | 49 | ····['update_5ftemperature_5fconstants_33',·['update_temperature_constants',·['../classgmx_1_1Update.xhtml#afa5d8919006df7093a2224fbc2f9fd4c',·1,·'gmx::Update']]], |
Offset 54, 17 lines modified | Offset 54, 17 lines modified | ||
54 | ····['updatechanged_38',·['UpdateChanged',·['../group__module__testutils.xhtml#gga973016f1f714be0d0eb5599877dcfee8afec701370fbe10a404604cc78512c8ac',·1,·'gmx::test']]], | 54 | ····['updatechanged_38',·['UpdateChanged',·['../group__module__testutils.xhtml#gga973016f1f714be0d0eb5599877dcfee8afec701370fbe10a404604cc78512c8ac',·1,·'gmx::test']]], |
55 | ····['updateconstraints_39',·['UpdateConstraints',·['../namespacegmx.xhtml#a73202d646d57bcc963d8afd5a16015f0ab0634f71dbc527342668f2a63f1b3510',·1,·'gmx']]], | 55 | ····['updateconstraints_39',·['UpdateConstraints',·['../namespacegmx.xhtml#a73202d646d57bcc963d8afd5a16015f0ab0634f71dbc527342668f2a63f1b3510',·1,·'gmx']]], |
56 | ····['updatecoordinates_40',·['UpdateCoordinates',·['../namespacegmx.xhtml#a73202d646d57bcc963d8afd5a16015f0a23714d9a49cc46ca81ad32670bde8b5e',·1,·'gmx']]], | 56 | ····['updatecoordinates_40',·['UpdateCoordinates',·['../namespacegmx.xhtml#a73202d646d57bcc963d8afd5a16015f0a23714d9a49cc46ca81ad32670bde8b5e',·1,·'gmx']]], |
57 | ····['updatecorrelationgridhistory_41',·['updateCorrelationGridHistory',·['../namespacegmx.xhtml#a25892b094f85a4d534ed625143b489e2',·1,·'gmx']]], | 57 | ····['updatecorrelationgridhistory_41',·['updateCorrelationGridHistory',·['../namespacegmx.xhtml#a25892b094f85a4d534ed625143b489e2',·1,·'gmx']]], |
58 | ····['updateforatompbcjumps_42',·['updateForAtomPbcJumps',·['../classgmx_1_1WholeMoleculeTransform.xhtml#ac2f8cb9aec06b08634aeafdf32eec96e',·1,·'gmx::WholeMoleculeTransform']]], | 58 | ····['updateforatompbcjumps_42',·['updateForAtomPbcJumps',·['../classgmx_1_1WholeMoleculeTransform.xhtml#ac2f8cb9aec06b08634aeafdf32eec96e',·1,·'gmx::WholeMoleculeTransform']]], |
59 | ····['updatefromcommandline_43',·['updateFromCommandLine',·['../classgmx_1_1LegacyMdrunOptions.xhtml#a0b0230f493d20c663ed23e838dab6692',·1,·'gmx::LegacyMdrunOptions']]], | 59 | ····['updatefromcommandline_43',·['updateFromCommandLine',·['../classgmx_1_1LegacyMdrunOptions.xhtml#a0b0230f493d20c663ed23e838dab6692',·1,·'gmx::LegacyMdrunOptions']]], |
60 | ····['updateglobalstate_44',·['updateGlobalState',·['../namespacegmx.xhtml#a109fb025f86dc445f7b53afb3f9af2b3',·1,·'gmx']]], | 60 | ····['updateglobalstate_44',·['updateGlobalState',·['../namespacegmx.xhtml#a109fb025f86dc445f7b53afb3f9af2b3',·1,·'gmx']]], |
61 | ····['updategroups_45',·['updategroups',·['../classgmx_1_1UpdateGroups.xhtml',·1,·'gmx::UpdateGroups'], | ||
62 | ····· | 61 | ····['updategroups_45',·['updategroups',·['../classgmx_1_1UpdateGroups.xhtml#ae953f890b3234f0a98247d77201f2c5e',·1,·'gmx::UpdateGroups::UpdateGroups(std::vector<·RangePartitioning·>·&&updateGroupingPerMoleculeType,·real·maxUpdateGroupRadius)'], |
63 | ········['../classgmx_1_1UpdateGroups.xhtml#aec6aff66b1a4e1d52f8c164e99579b85',·1,·'gmx::UpdateGroups::UpdateGroups()=default'] | 62 | ········['../classgmx_1_1UpdateGroups.xhtml#aec6aff66b1a4e1d52f8c164e99579b85',·1,·'gmx::UpdateGroups::UpdateGroups()=default'], |
63 | ········['../classgmx_1_1UpdateGroups.xhtml',·1,·'gmx::UpdateGroups'] | ||
64 | ····]], | 64 | ····]], |
65 | ····['updategroups_2eh_46',·['updategroups.h',·['../updategroups_8h.xhtml',·1,·'']]], | 65 | ····['updategroups_2eh_46',·['updategroups.h',·['../updategroups_8h.xhtml',·1,·'']]], |
66 | ····['updategroupscog_47',·['updategroupscog',·['../classgmx_1_1UpdateGroupsCog.xhtml#a2d5ea1c35c8fa0fa09a22a4924306974',·1,·'gmx::UpdateGroupsCog::UpdateGroupsCog()'], | 66 | ····['updategroupscog_47',·['updategroupscog',·['../classgmx_1_1UpdateGroupsCog.xhtml#a2d5ea1c35c8fa0fa09a22a4924306974',·1,·'gmx::UpdateGroupsCog::UpdateGroupsCog()'], |
67 | ········['../classgmx_1_1UpdateGroupsCog.xhtml',·1,·'gmx::UpdateGroupsCog'] | 67 | ········['../classgmx_1_1UpdateGroupsCog.xhtml',·1,·'gmx::UpdateGroupsCog'] |
68 | ····]], | 68 | ····]], |
69 | ····['updategroupscog_2eh_48',·['updategroupscog.h',·['../updategroupscog_8h.xhtml',·1,·'']]], | 69 | ····['updategroupscog_2eh_48',·['updategroupscog.h',·['../updategroupscog_8h.xhtml',·1,·'']]], |
70 | ····['updatehistory_49',·['updatehistory',·['../structt__oriresdata.xhtml#a7806904b5f7dcb25d5dec4555be7b5ac',·1,·'t_oriresdata::updateHistory()'], | 70 | ····['updatehistory_49',·['updatehistory',·['../structt__oriresdata.xhtml#a7806904b5f7dcb25d5dec4555be7b5ac',·1,·'t_oriresdata::updateHistory()'], |
Offset 108, 16 lines modified | Offset 108, 16 lines modified | ||
108 | ····['useljcombrule_85',·['useLjCombRule',·['../namespaceNbnxm.xhtml#a4e114b889870c41c6ee9afa76847b0e4',·1,·'Nbnxm']]], | 108 | ····['useljcombrule_85',·['useLjCombRule',·['../namespaceNbnxm.xhtml#a4e114b889870c41c6ee9afa76847b0e4',·1,·'Nbnxm']]], |
109 | ····['usemdgpugraph_86',·['useMdGpuGraph',·['../classgmx_1_1SimulationWorkload.xhtml#a76cb5c0c6b1dcb6f85e381dfbfc5046f',·1,·'gmx::SimulationWorkload']]], | 109 | ····['usemdgpugraph_86',·['useMdGpuGraph',·['../classgmx_1_1SimulationWorkload.xhtml#a76cb5c0c6b1dcb6f85e381dfbfc5046f',·1,·'gmx::SimulationWorkload']]], |
110 | ····['usemts_87',·['useMts',·['../classgmx_1_1SimulationWorkload.xhtml#ac585c3fa9df3937cb8ae629aa07df131',·1,·'gmx::SimulationWorkload']]], | 110 | ····['usemts_87',·['useMts',·['../classgmx_1_1SimulationWorkload.xhtml#ac585c3fa9df3937cb8ae629aa07df131',·1,·'gmx::SimulationWorkload']]], |
111 | ····['usenvshmem_88',·['useNvshmem',·['../classgmx_1_1SimulationWorkload.xhtml#ac092afa60701acf7cdcb00032c48172f',·1,·'gmx::SimulationWorkload']]], | 111 | ····['usenvshmem_88',·['useNvshmem',·['../classgmx_1_1SimulationWorkload.xhtml#ac092afa60701acf7cdcb00032c48172f',·1,·'gmx::SimulationWorkload']]], |
112 | ····['useonlymtscombinedforcebuffer_89',·['useOnlyMtsCombinedForceBuffer',·['../classgmx_1_1StepWorkload.xhtml#a457f1f1072fc3c9c0f5fb089b92f5f90',·1,·'gmx::StepWorkload']]], | 112 | ····['useonlymtscombinedforcebuffer_89',·['useOnlyMtsCombinedForceBuffer',·['../classgmx_1_1StepWorkload.xhtml#a457f1f1072fc3c9c0f5fb089b92f5f90',·1,·'gmx::StepWorkload']]], |
113 | ····['userdefinedfloat_5f_90',·['userDefinedFloat_',·['../structgmx_1_1MrcDensityMapHeader.xhtml#abec7c46e44fcc58659f2e4f08ce3ca69',·1,·'gmx::MrcDensityMapHeader']]], | 113 | ····['userdefinedfloat_5f_90',·['userDefinedFloat_',·['../structgmx_1_1MrcDensityMapHeader.xhtml#abec7c46e44fcc58659f2e4f08ce3ca69',·1,·'gmx::MrcDensityMapHeader']]], |
114 | ····['usergpuids_2eh_91',·['usergpuids.h',·['../usergpuids_8h.xhtml',·1,·'']]], | 114 | ····['usergpuids_2eh_91',·['usergpuids.h',·['../usergpuids_8h.xhtml',·1,·'']]], |
115 | ····['userinputerror_92',·['userinputerror',·['../classgmx_1_1UserInputError.xhtml',·1,·'gmx::UserInputError'], | ||
115 | ···· | 116 | ········['../classgmx_1_1UserInputError.xhtml#a07ae9dc1612508d54e18079cebdc4316',·1,·'gmx::UserInputError::UserInputError()'] |
116 | ········['../classgmx_1_1UserInputError.xhtml',·1,·'gmx::UserInputError'] | ||
117 | ····]], | 117 | ····]], |
118 | ····['usesimd_93',·['useSimd',·['../classgmx_1_1SettleData.xhtml#a6f48e1b037af7f441ccf2119bc5a3d21',·1,·'gmx::SettleData']]], | 118 | ····['usesimd_93',·['useSimd',·['../classgmx_1_1SettleData.xhtml#a6f48e1b037af7f441ccf2119bc5a3d21',·1,·'gmx::SettleData']]], |
119 | ····['using_20gromacs_20as_20a_20library_94',·['Using·GROMACS·as·a·library',·['../page_usinglibrary.xhtml',·1,·'index']]], | 119 | ····['using_20gromacs_20as_20a_20library_94',·['Using·GROMACS·as·a·library',·['../page_usinglibrary.xhtml',·1,·'index']]], |
120 | ····['using_20reference_20data_20in_20c_20tests_95',·['Using·reference·data·in·C++·tests',·['../page_refdata.xhtml',·1,·'index']]], | 120 | ····['using_20reference_20data_20in_20c_20tests_95',·['Using·reference·data·in·C++·tests',·['../page_refdata.xhtml',·1,·'index']]], |
121 | ····['using_20reference_20data_20in_20code_96',·['Using·reference·data·in·code',·['../page_refdata.xhtml#autotoc_md53',·1,·'']]], | 121 | ····['using_20reference_20data_20in_20code_96',·['Using·reference·data·in·code',·['../page_refdata.xhtml#autotoc_md53',·1,·'']]], |
122 | ····['using_20the_20modular_20simulator_97',·['Using·the·modular·simulator',·['../page_modularsimulator.xhtml#autotoc_md8',·1,·'']]], | 122 | ····['using_20the_20modular_20simulator_97',·['Using·the·modular·simulator',·['../page_modularsimulator.xhtml#autotoc_md8',·1,·'']]], |
123 | ····['usingfullelectrostatics_98',·['usingFullElectrostatics',·['../md__enums_8h.xhtml#ad148c04f38d8d7b6817df8516b4c6ff4',·1,·'md_enums.h']]], | 123 | ····['usingfullelectrostatics_98',·['usingFullElectrostatics',·['../md__enums_8h.xhtml#ad148c04f38d8d7b6817df8516b4c6ff4',·1,·'md_enums.h']]], |
Offset 330, 19 lines modified | Offset 330, 19 lines modified | ||
330 | ········['../classForceHelperBuffers.xhtml',·1,·'ForceHelperBuffers'] | 330 | ········['../classForceHelperBuffers.xhtml',·1,·'ForceHelperBuffers'] |
331 | ····]], | 331 | ····]], |
332 | ····['forcemtscombined_191',·['forcemtscombined',·['../classgmx_1_1ForceBuffersView.xhtml#a166f7af032d4e40035ffec7b665ed572',·1,·'gmx::ForceBuffersView::forceMtsCombined()·const'], | 332 | ····['forcemtscombined_191',·['forcemtscombined',·['../classgmx_1_1ForceBuffersView.xhtml#a166f7af032d4e40035ffec7b665ed572',·1,·'gmx::ForceBuffersView::forceMtsCombined()·const'], |
333 | ········['../classgmx_1_1ForceBuffersView.xhtml#a6c291c3c289aecea56104b7e79325558',·1,·'gmx::ForceBuffersView::forceMtsCombined()'] | 333 | ········['../classgmx_1_1ForceBuffersView.xhtml#a6c291c3c289aecea56104b7e79325558',·1,·'gmx::ForceBuffersView::forceMtsCombined()'] |
334 | ····]], | 334 | ····]], |
335 | ····['forcemtscombinedwithpadding_192',·['forceMtsCombinedWithPadding',·['../classgmx_1_1ForceBuffersView.xhtml#a297d8a01836b387a5ab1be510aed44fa',·1,·'gmx::ForceBuffersView']]], | 335 | ····['forcemtscombinedwithpadding_192',·['forceMtsCombinedWithPadding',·['../classgmx_1_1ForceBuffersView.xhtml#a297d8a01836b387a5ab1be510aed44fa',·1,·'gmx::ForceBuffersView']]], |
336 | ····['forceoutput_2eh_193',·['forceoutput.h',·['../forceoutput_8h.xhtml',·1,·'']]], | 336 | ····['forceoutput_2eh_193',·['forceoutput.h',·['../forceoutput_8h.xhtml',·1,·'']]], |
337 | ····['forceoutputs_194',·['forceoutputs',·['../classgmx_1_1ForceOutputs.xhtml',·1,·'gmx::ForceOutputs'], | ||
338 | ····· | 337 | ····['forceoutputs_194',·['forceoutputs',·['../classgmx_1_1ForceOutputs.xhtml#abd589c42af0e81e787dd76f03d020187',·1,·'gmx::ForceOutputs::ForceOutputs()'], |
338 | ········['../classgmx_1_1ForceOutputs.xhtml',·1,·'gmx::ForceOutputs'] | ||
339 | ····]], | 339 | ····]], |
340 | ····['forceparam_195',·['forceparam',·['../classInteractionOfType.xhtml#a6baea034eb73978879f0a9d1fe80d938',·1,·'InteractionOfType::forceParam()'], | ||
341 | ····· | 340 | ····['forceparam_195',·['forceparam',·['../classInteractionOfType.xhtml#a9377381fa12dd22697c3e1b256cd8cf3',·1,·'InteractionOfType::forceParam()·const'], |
341 | ········['../classInteractionOfType.xhtml#a6baea034eb73978879f0a9d1fe80d938',·1,·'InteractionOfType::forceParam()'] | ||
342 | ····]], | 342 | ····]], |
343 | ····['forceproviderinput_196',·['forceproviderinput',·['../classgmx_1_1ForceProviderInput.xhtml#a2f7907d0aae391014935b848ac4f3561',·1,·'gmx::ForceProviderInput::ForceProviderInput()'], | 343 | ····['forceproviderinput_196',·['forceproviderinput',·['../classgmx_1_1ForceProviderInput.xhtml#a2f7907d0aae391014935b848ac4f3561',·1,·'gmx::ForceProviderInput::ForceProviderInput()'], |
344 | ········['../classgmx_1_1ForceProviderInput.xhtml',·1,·'gmx::ForceProviderInput'] | 344 | ········['../classgmx_1_1ForceProviderInput.xhtml',·1,·'gmx::ForceProviderInput'] |
345 | ····]], | 345 | ····]], |
346 | ····['forceprovideroutput_197',·['forceprovideroutput',·['../classgmx_1_1ForceProviderOutput.xhtml#a462f088782c665aa46acd9a7492853df',·1,·'gmx::ForceProviderOutput::ForceProviderOutput()'], | 346 | ····['forceprovideroutput_197',·['forceprovideroutput',·['../classgmx_1_1ForceProviderOutput.xhtml#a462f088782c665aa46acd9a7492853df',·1,·'gmx::ForceProviderOutput::ForceProviderOutput()'], |
347 | ········['../classgmx_1_1ForceProviderOutput.xhtml',·1,·'gmx::ForceProviderOutput'] | 347 | ········['../classgmx_1_1ForceProviderOutput.xhtml',·1,·'gmx::ForceProviderOutput'] |
348 | ····]], | 348 | ····]], |
Offset 350, 16 lines modified | Offset 350, 16 lines modified | ||
350 | ····['forcerec_199',·['forceRec',·['../structgmx_1_1BenchmarkSystem.xhtml#a534bb21016f5b35597ffc2470da7bdf5',·1,·'gmx::BenchmarkSystem']]], | 350 | ····['forcerec_199',·['forceRec',·['../structgmx_1_1BenchmarkSystem.xhtml#a534bb21016f5b35597ffc2470da7bdf5',·1,·'gmx::BenchmarkSystem']]], |
351 | ····['forcerec_5f_200',·['forceRec_',·['../classgmx_1_1LegacyInput.xhtml#ab5f30c00289b7ca566dfbd2bcb114c81',·1,·'gmx::LegacyInput']]], | 351 | ····['forcerec_5f_200',·['forceRec_',·['../classgmx_1_1LegacyInput.xhtml#ab5f30c00289b7ca566dfbd2bcb114c81',·1,·'gmx::LegacyInput']]], |
352 | ····['forces_201',·['forces',·['../group__module__ewald.xhtml',·1,·'Ewald-family·treatments·of·long-ranged·forces'], | 352 | ····['forces_201',·['forces',·['../group__module__ewald.xhtml',·1,·'Ewald-family·treatments·of·long-ranged·forces'], |
353 | ········['../classgmx_1_1Selection.xhtml#a02f9b69ac0c98fe3a7c857917e220da4',·1,·'gmx::Selection::forces()'] | 353 | ········['../classgmx_1_1Selection.xhtml#a02f9b69ac0c98fe3a7c857917e220da4',·1,·'gmx::Selection::forces()'] |
354 | ····]], | 354 | ····]], |
355 | ····['forcesandenergy_202',·['ForcesAndEnergy',·['../bonded_8h.xhtml#aacdbef16553b9b562a9a05e7b8c135f1aa00644de02a06dd261b599ddc63f3234',·1,·'bonded.h']]], | 355 | ····['forcesandenergy_202',·['ForcesAndEnergy',·['../bonded_8h.xhtml#aacdbef16553b9b562a9a05e7b8c135f1aa00644de02a06dd261b599ddc63f3234',·1,·'bonded.h']]], |
356 | ····['forcesandvirialandenergy_203',·['ForcesAndVirialAndEnergy',·['../bonded_8h.xhtml#aacdbef16553b9b562a9a05e7b8c135f1ae8e1203cbd97d9a274adbad82b0fb438',·1,·'bonded.h']]], | 356 | ····['forcesandvirialandenergy_203',·['ForcesAndVirialAndEnergy',·['../bonded_8h.xhtml#aacdbef16553b9b562a9a05e7b8c135f1ae8e1203cbd97d9a274adbad82b0fb438',·1,·'bonded.h']]], |
357 | ····['forcesigmaepsilon_204',·['forcesigmaepsilon',·['../classgmx_1_1LennardJonesCalculator_3_01calculateEnergies_00_01InteractionModifiers_1_1PotSwitch_01_4.xhtml#a86272df0ac3631f0b5bb5a83d7be3624',·1,·'gmx::LennardJonesCalculator<·calculateEnergies,·InteractionModifiers::PotSwitch·>::forceSigmaEpsilon()'], | ||
358 | ····· | 357 | ····['forcesigmaepsilon_204',·['forcesigmaepsilon',·['../classgmx_1_1LennardJonesCalculator_3_01calculateEnergies_00_01InteractionModifiers_1_1ForceSwitch_01_4.xhtml#a69e68d046877a3a0af951b89d5fa2c02',·1,·'gmx::LennardJonesCalculator<·calculateEnergies,·Int[·...·truncated·by·diffoscope;·len:·59,·SHA:·c94f9f844bf7037266c70644b2f1327b2309fcc817718cd923392530b2c0192c·...·] |
358 | ········['../classgmx_1_1LennardJonesCalculator_3_01calculateEnergies_00_01InteractionModifiers_1_1PotSwitch_01_4.xhtml#a86272df0ac3631f0b5bb5a83d7be3624',·1,·'gmx::LennardJonesCalculator<·calculateEnergies,·InteractionModifiers::PotSwitch·>::forceSigmaEpsilon()'] | ||
359 | ····]], | 359 | ····]], |
360 | ····['forcesnosimd_205',·['ForcesNoSimd',·['../bonded_8h.xhtml#aacdbef16553b9b562a9a05e7b8c135f1a8917e450c056da6d8461932eb69740ab',·1,·'bonded.h']]], | 360 | ····['forcesnosimd_205',·['ForcesNoSimd',·['../bonded_8h.xhtml#aacdbef16553b9b562a9a05e7b8c135f1a8917e450c056da6d8461932eb69740ab',·1,·'bonded.h']]], |
361 | ····['forcessimdwhenavailable_206',·['ForcesSimdWhenAvailable',·['../bonded_8h.xhtml#aacdbef16553b9b562a9a05e7b8c135f1a5fc0f529c3ea0688814b93b143afe101',·1,·'bonded.h']]], | 361 | ····['forcessimdwhenavailable_206',·['ForcesSimdWhenAvailable',·['../bonded_8h.xhtml#aacdbef16553b9b562a9a05e7b8c135f1a5fc0f529c3ea0688814b93b143afe101',·1,·'bonded.h']]], |
362 | ····['forcesvector_207',·['ForcesVector',·['../namespacegmx_1_1test.xhtml#ad784e0ed3eca143a1a3a36da930300df',·1,·'gmx::test']]], | 362 | ····['forcesvector_207',·['ForcesVector',·['../namespacegmx_1_1test.xhtml#ad784e0ed3eca143a1a3a36da930300df',·1,·'gmx::test']]], |
363 | ····['forcetable_2eh_208',·['forcetable.h',·['../forcetable_8h.xhtml',·1,·'']]], | 363 | ····['forcetable_2eh_208',·['forcetable.h',·['../forcetable_8h.xhtml',·1,·'']]], |
364 | ····['forcewithpadding_209',·['forceWithPadding',·['../classgmx_1_1ForceBuffersView.xhtml#a90ada9d30335398fb2b31e296c92487b',·1,·'gmx::ForceBuffersView']]], | 364 | ····['forcewithpadding_209',·['forceWithPadding',·['../classgmx_1_1ForceBuffersView.xhtml#a90ada9d30335398fb2b31e296c92487b',·1,·'gmx::ForceBuffersView']]], |
365 | ····['forcewithshiftforces_210',·['forcewithshiftforces',·['../classgmx_1_1ForceWithShiftForces.xhtml',·1,·'gmx::ForceWithShiftForces'], | 365 | ····['forcewithshiftforces_210',·['forcewithshiftforces',·['../classgmx_1_1ForceWithShiftForces.xhtml',·1,·'gmx::ForceWithShiftForces'], |
Offset 72347, 19 lines modified | Offset 72347, 19 lines modified | ||
72347 | ····<member·refid="template_8cpp_1a0ddf1224851353fc92bfbff6f499fa97"·kind="function"> | 72347 | ····<member·refid="template_8cpp_1a0ddf1224851353fc92bfbff6f499fa97"·kind="function"> |
72348 | ······<name>main</name> | 72348 | ······<name>main</name> |
72349 | ····</member> | 72349 | ····</member> |
72350 | ··</compound> | 72350 | ··</compound> |
72351 | ··<compound·refid="abstractdata_8cpp"·kind="file"> | 72351 | ··<compound·refid="abstractdata_8cpp"·kind="file"> |
72352 | ····<name>abstractdata.cpp</name> | 72352 | ····<name>abstractdata.cpp</name> |
72353 | ··</compound> | 72353 | ··</compound> |
72354 | ··<compound·refid="a | 72354 | ··<compound·refid="arraydata_8cpp"·kind="file"> |
72355 | ····<name>a | 72355 | ····<name>arraydata.cpp</name> |
72356 | ··</compound> | 72356 | ··</compound> |
72357 | ··<compound·refid="tests_2a | 72357 | ··<compound·refid="tests_2arraydata_8cpp"·kind="file"> |
72358 | ····<name>a | 72358 | ····<name>arraydata.cpp</name> |
72359 | ··</compound> | 72359 | ··</compound> |
72360 | ··<compound·refid="dataframe_8cpp"·kind="file"> | 72360 | ··<compound·refid="dataframe_8cpp"·kind="file"> |
72361 | ····<name>dataframe.cpp</name> | 72361 | ····<name>dataframe.cpp</name> |
72362 | ··</compound> | 72362 | ··</compound> |
72363 | ··<compound·refid="datamodule_8cpp"·kind="file"> | 72363 | ··<compound·refid="datamodule_8cpp"·kind="file"> |
72364 | ····<name>datamodule.cpp</name> | 72364 | ····<name>datamodule.cpp</name> |
72365 | ··</compound> | 72365 | ··</compound> |
Offset 72380, 83 lines modified | Offset 72380, 95 lines modified | ||
72380 | ··</compound> | 72380 | ··</compound> |
72381 | ··<compound·refid="datastorage_8h"·kind="file"> | 72381 | ··<compound·refid="datastorage_8h"·kind="file"> |
72382 | ····<name>datastorage.h</name> | 72382 | ····<name>datastorage.h</name> |
72383 | ··</compound> | 72383 | ··</compound> |
72384 | ··<compound·refid="framelocaldata_8h"·kind="file"> | 72384 | ··<compound·refid="framelocaldata_8h"·kind="file"> |
72385 | ····<name>framelocaldata.h</name> | 72385 | ····<name>framelocaldata.h</name> |
72386 | ··</compound> | 72386 | ··</compound> |
72387 | ··<compound·refid="modules_2average_8cpp"·kind="file"> | ||
72388 | ····<name>average.cpp</name> | ||
72389 | ··</compound> | ||
72390 | ··<compound·refid="tests_2average_8cpp"·kind="file"> | ||
72391 | ····<name>average.cpp</name> | ||
72392 | ··</compound> | ||
72387 | ··<compound·refid="displacement_8cpp"·kind="file"> | 72393 | ··<compound·refid="displacement_8cpp"·kind="file"> |
72388 | ····<name>displacement.cpp</name> | 72394 | ····<name>displacement.cpp</name> |
72389 | ··</compound> | 72395 | ··</compound> |
72390 | ··<compound·refid="frameaverager_8cpp"·kind="file"> | 72396 | ··<compound·refid="frameaverager_8cpp"·kind="file"> |
72391 | ····<name>frameaverager.cpp</name> | 72397 | ····<name>frameaverager.cpp</name> |
72392 | ··</compound> | 72398 | ··</compound> |
72393 | ··<compound·refid="frameaverager_8h"·kind="file"> | 72399 | ··<compound·refid="frameaverager_8h"·kind="file"> |
72394 | ····<name>frameaverager.h</name> | 72400 | ····<name>frameaverager.h</name> |
72395 | ··</compound> | 72401 | ··</compound> |
72402 | ··<compound·refid="modules_2histogram_8cpp"·kind="file"> | ||
72403 | ····<name>histogram.cpp</name> | ||
72404 | ··</compound> | ||
72405 | ··<compound·refid="tests_2histogram_8cpp"·kind="file"> | ||
72406 | ····<name>histogram.cpp</name> | ||
72407 | ··</compound> | ||
72408 | ··<compound·refid="modules_2lifetime_8cpp"·kind="file"> | ||
72409 | ····<name>lifetime.cpp</name> | ||
72410 | ··</compound> | ||
72411 | ··<compound·refid="tests_2lifetime_8cpp"·kind="file"> | ||
72412 | ····<name>lifetime.cpp</name> | ||
72413 | ··</compound> | ||
72396 | ··<compound·refid="plot_8cpp"·kind="file"> | 72414 | ··<compound·refid="plot_8cpp"·kind="file"> |
72397 | ····<name>plot.cpp</name> | 72415 | ····<name>plot.cpp</name> |
72398 | ··</compound> | 72416 | ··</compound> |
72399 | ··<compound·refid="paralleloptions_8h"·kind="file"> | 72417 | ··<compound·refid="paralleloptions_8h"·kind="file"> |
72400 | ····<name>paralleloptions.h</name> | 72418 | ····<name>paralleloptions.h</name> |
72401 | ··</compound> | 72419 | ··</compound> |
72402 | ··<compound·refid="a | 72420 | ··<compound·refid="analysisdata_8cpp"·kind="file"> |
72403 | ····<name>a | 72421 | ····<name>analysisdata.cpp</name> |
72404 | ··</compound> | ||
72405 | ··<compound·refid="tests_2arraydata_8cpp"·kind="file"> | ||
72406 | ····<name>arraydata.cpp</name> | ||
72407 | ··</compound> | ||
72408 | ··<compound·refid="modules_2average_8cpp"·kind="file"> | ||
72409 | ····<name>average.cpp</name> | ||
72410 | ··</compound> | 72422 | ··</compound> |
72411 | ··<compound·refid="tests_2a | 72423 | ··<compound·refid="tests_2analysisdata_8cpp"·kind="file"> |
72412 | ····<name>a | 72424 | ····<name>analysisdata.cpp</name> |
72413 | ··</compound> | 72425 | ··</compound> |
72414 | ··<compound·refid="datatest_8cpp"·kind="file"> | 72426 | ··<compound·refid="datatest_8cpp"·kind="file"> |
72415 | ····<name>datatest.cpp</name> | 72427 | ····<name>datatest.cpp</name> |
72416 | ··</compound> | 72428 | ··</compound> |
72417 | ··<compound·refid="datatest_8h"·kind="file"> | 72429 | ··<compound·refid="datatest_8h"·kind="file"> |
72418 | ····<name>datatest.h</name> | 72430 | ····<name>datatest.h</name> |
72419 | ··</compound> | 72431 | ··</compound> |
72420 | ··<compound·refid="modules_2histogram_8cpp"·kind="file"> | ||
72421 | ····<name>histogram.cpp</name> | ||
72422 | ··</compound> | ||
72423 | ··<compound·refid="tests_2histogram_8cpp"·kind="file"> | ||
72424 | ····<name>histogram.cpp</name> | ||
72425 | ··</compound> | ||
72426 | ··<compound·refid="modules_2lifetime_8cpp"·kind="file"> | ||
72427 | ····<name>lifetime.cpp</name> | ||
72428 | ··</compound> | ||
72429 | ··<compound·refid="tests_2lifetime_8cpp"·kind="file"> | ||
72430 | ····<name>lifetime.cpp</name> | ||
72431 | ··</compound> | ||
72432 | ··<compound·refid="mock__datamodule_8cpp"·kind="file"> | 72432 | ··<compound·refid="mock__datamodule_8cpp"·kind="file"> |
72433 | ····<name>mock_datamodule.cpp</name> | 72433 | ····<name>mock_datamodule.cpp</name> |
72434 | ··</compound> | 72434 | ··</compound> |
72435 | ··<compound·refid="mock__datamodule_8h"·kind="file"> | 72435 | ··<compound·refid="mock__datamodule_8h"·kind="file"> |
72436 | ····<name>mock_datamodule.h</name> | 72436 | ····<name>mock_datamodule.h</name> |
72437 | ··</compound> | 72437 | ··</compound> |
72438 | ··<compound·refid="awh_8cpp"·kind="file"> | 72438 | ··<compound·refid="awh_8cpp"·kind="file"> |
72439 | ····<name>awh.cpp</name> | 72439 | ····<name>awh.cpp</name> |
72440 | ··</compound> | 72440 | ··</compound> |
72441 | ··<compound·refid="awh_8h"·kind="file"> | 72441 | ··<compound·refid="awh_8h"·kind="file"> |
72442 | ····<name>awh.h</name> | 72442 | ····<name>awh.h</name> |
72443 | ··</compound> | 72443 | ··</compound> |
72444 | ··<compound·refid="bias_8cpp"·kind="file"> | ||
72445 | ····<name>bias.cpp</name> | ||
72446 | ··</compound> | ||
72447 | ··<compound·refid="tests_2bias_8cpp"·kind="file"> | ||
72448 | ····<name>bias.cpp</name> | ||
72449 | ··</compound> | ||
72444 | ··<compound·refid="bias_8h"·kind="file"> | 72450 | ··<compound·refid="bias_8h"·kind="file"> |
72445 | ····<name>bias.h</name> | 72451 | ····<name>bias.h</name> |
72446 | ··</compound> | 72452 | ··</compound> |
72447 | ··<compound·refid="biasgrid_8h"·kind="file"> | 72453 | ··<compound·refid="biasgrid_8h"·kind="file"> |
72448 | ····<name>biasgrid.h</name> | 72454 | ····<name>biasgrid.h</name> |
72449 | ··</compound> | 72455 | ··</compound> |
72450 | ··<compound·refid="biasparams_8cpp"·kind="file"> | 72456 | ··<compound·refid="biasparams_8cpp"·kind="file"> |
72451 | ····<name>biasparams.cpp</name> | 72457 | ····<name>biasparams.cpp</name> |
72452 | ··</compound> | 72458 | ··</compound> |
72453 | ··<compound·refid="biasparams_8h"·kind="file"> | 72459 | ··<compound·refid="biasparams_8h"·kind="file"> |
72454 | ····<name>biasparams.h</name> | 72460 | ····<name>biasparams.h</name> |
72455 | ··</compound> | 72461 | ··</compound> |
72462 | ··<compound·refid="biassharing_8cpp"·kind="file"> | ||
72463 | ····<name>biassharing.cpp</name> | ||
72464 | ··</compound> | ||
72465 | ··<compound·refid="tests_2biassharing_8cpp"·kind="file"> | ||
72466 | ····<name>biassharing.cpp</name> | ||
72467 | ··</compound> | ||
72456 | ··<compound·refid="biassharing_8h"·kind="file"> | 72468 | ··<compound·refid="biassharing_8h"·kind="file"> |
Max diff block lines reached; 382192/386768 bytes (98.82%) of diff not shown. |
Offset 2628, 15 lines modified | Offset 2628, 15 lines modified | ||
2628 | ··············<anchor·id="todo_1_todo000154"/> | 2628 | ··············<anchor·id="todo_1_todo000154"/> |
2629 | ··············Change·this·to·class | 2629 | ··············Change·this·to·class |
2630 | ············</para> | 2630 | ············</para> |
2631 | ··········</listitem> | 2631 | ··········</listitem> |
2632 | ··········<varlistentry> | 2632 | ··········<varlistentry> |
2633 | ············<term> | 2633 | ············<term> |
2634 | ··············Member | 2634 | ··············Member |
2635 | ··············<ref·refid="pme_8 | 2635 | ··············<ref·refid="pme_8cpp_1adc07e6be8d5225d0d192c27ccc474124"·kindref="member">gmx_pme_init</ref> |
2636 | ··············(const | 2636 | ··············(const |
2637 | ··············<ref·refid="structt__commrec"·kindref="compound">t_commrec</ref> | 2637 | ··············<ref·refid="structt__commrec"·kindref="compound">t_commrec</ref> |
2638 | ··············*cr,·const | 2638 | ··············*cr,·const |
2639 | ··············<ref·refid="structNumPmeDomains"·kindref="compound">NumPmeDomains</ref> | 2639 | ··············<ref·refid="structNumPmeDomains"·kindref="compound">NumPmeDomains</ref> |
2640 | ··············&numPmeDomains,·const | 2640 | ··············&numPmeDomains,·const |
2641 | ··············<ref·refid="structt__inputrec"·kindref="compound">t_inputrec</ref> | 2641 | ··············<ref·refid="structt__inputrec"·kindref="compound">t_inputrec</ref> |
2642 | ··············*ir,·const·matrix·box,·real·haloExtentForAtomDisplacement,·gmx_bool·bFreeEnergy_q,·gmx_bool·bFreeEnergy_lj,·gmx_bool·bReproducible,·real·ewaldcoeff_q,·real·ewaldcoeff_lj,·int·nthread,·PmeRunMode·runMode, | 2642 | ··············*ir,·const·matrix·box,·real·haloExtentForAtomDisplacement,·gmx_bool·bFreeEnergy_q,·gmx_bool·bFreeEnergy_lj,·gmx_bool·bReproducible,·real·ewaldcoeff_q,·real·ewaldcoeff_lj,·int·nthread,·PmeRunMode·runMode, |
Offset 3198, 15 lines modified | Offset 3198, 15 lines modified | ||
3198 | ··············<ndash/> | 3198 | ··············<ndash/> |
3199 | ··············renaming·coefficients·to·charges·(?) | 3199 | ··············renaming·coefficients·to·charges·(?) |
3200 | ············</para> | 3200 | ············</para> |
3201 | ··········</listitem> | 3201 | ··········</listitem> |
3202 | ··········<varlistentry> | 3202 | ··········<varlistentry> |
3203 | ············<term> | 3203 | ············<term> |
3204 | ··············Member | 3204 | ··············Member |
3205 | ··············<ref·refid="pme_8 | 3205 | ··············<ref·refid="pme_8cpp_1a9cfbe9fa691aabaf1a9e10fa06858c96"·kindref="member">pme_run_mode</ref> |
3206 | ··············(const·gmx_pme_t·*pme) | 3206 | ··············(const·gmx_pme_t·*pme) |
3207 | ············</term> | 3207 | ············</term> |
3208 | ··········</varlistentry> | 3208 | ··········</varlistentry> |
3209 | ··········<listitem> | 3209 | ··········<listitem> |
3210 | ············<para> | 3210 | ············<para> |
3211 | ··············<anchor·id="todo_1_todo000027"/> | 3211 | ··············<anchor·id="todo_1_todo000027"/> |
3212 | ··············This·is·a·rather·static·data·that·should·be·managed·by·the·higher·level·task·scheduler. | 3212 | ··············This·is·a·rather·static·data·that·should·be·managed·by·the·higher·level·task·scheduler. |
Offset 17508, 15 lines modified | Offset 17508, 15 lines modified | ||
17508 | Dimitrios·Karkoulis,·Peter·Kasson,·Sebastian·Kehl,·Sebastian·Keller,·Jiri·Kraus,·Per·Larsson,·Viveca·Lindahl, | 17508 | Dimitrios·Karkoulis,·Peter·Kasson,·Sebastian·Kehl,·Sebastian·Keller,·Jiri·Kraus,·Per·Larsson,·Viveca·Lindahl, |
17509 | Erik·Marklund,·Pieter·Meulenhoff,·Teemu·Murtola,·Sander·Pronk,·Michael·Shirts,·Alfons·Sijbers,·Balint·Soproni,·David·van·der·Spoel,·Peter·Tieleman,·Carsten·Uphoff,·Jon·Vincent,·Teemu·Virolainen,·Christian·Wennberg, | 17509 | Erik·Marklund,·Pieter·Meulenhoff,·Teemu·Murtola,·Sander·Pronk,·Michael·Shirts,·Alfons·Sijbers,·Balint·Soproni,·David·van·der·Spoel,·Peter·Tieleman,·Carsten·Uphoff,·Jon·Vincent,·Teemu·Virolainen,·Christian·Wennberg, |
17510 | Maarten·Wolf,·Artem·Zhmurov | 17510 | Maarten·Wolf,·Artem·Zhmurov |
17511 | Project·leaders:·Berk·Hess,·Erik·Lindahl | 17511 | Project·leaders:·Berk·Hess,·Erik·Lindahl |
17512 | ©·1991·–·2000: | 17512 | ©·1991·–·2000: |
17513 | Department·of·Biophysical·Chemistry,·University·of·Groningen.·Nijenborgh·4,·9747·AG·Groningen, | 17513 | Department·of·Biophysical·Chemistry,·University·of·Groningen.·Nijenborgh·4,·9747·AG·Groningen, |
17514 | The·Netherlands. | 17514 | The·Netherlands. |
17515 | ©·2001·–·202 | 17515 | ©·2001·–·2026: |
17516 | The·GROMACS·development·teams·at·the·Royal·Institute·of·Technology·and·Uppsala·University, | 17516 | The·GROMACS·development·teams·at·the·Royal·Institute·of·Technology·and·Uppsala·University, |
17517 | Sweden. | 17517 | Sweden. |
17518 | This·manual·is·not·complete·and·has·no·pretension·to·be·so·due·to·lack·of·time·of·the·contributors·–·our·first | 17518 | This·manual·is·not·complete·and·has·no·pretension·to·be·so·due·to·lack·of·time·of·the·contributors·–·our·first |
17519 | priority·is·to·improve·the·software.·It·is·worked·on·continuously,·which·in·some·cases·might·mean·the·information | 17519 | priority·is·to·improve·the·software.·It·is·worked·on·continuously,·which·in·some·cases·might·mean·the·information |
17520 | is·not·entirely·correct. | 17520 | is·not·entirely·correct. |
17521 | Comments·on·form·and·content·are·welcome,·please·send·them·to·the·user·discussion·forum·or·the·developer | 17521 | Comments·on·form·and·content·are·welcome,·please·send·them·to·the·user·discussion·forum·or·the·developer |
17522 | discussion·forum·(see·our·webpage·or·this·section·on·how·to·contribute·(page·590)),·or·open·an·issue·on·our·issue | 17522 | discussion·forum·(see·our·webpage·or·this·section·on·how·to·contribute·(page·590)),·or·open·an·issue·on·our·issue |
Offset 4353, 15 lines modified | Offset 4353, 15 lines modified | ||
00011000:·656d·6973·7472·792c·2055·6e69·7665·7273··emistry,·Univers | 00011000:·656d·6973·7472·792c·2055·6e69·7665·7273··emistry,·Univers | ||
00011010:·6974·7920·6f66·2047·726f·6e69·6e67·656e··ity·of·Groningen | 00011010:·6974·7920·6f66·2047·726f·6e69·6e67·656e··ity·of·Groningen | ||
00011020:·2e0a·4e69·6a65·6e62·6f72·6768·2034·2c20··..Nijenborgh·4,· | 00011020:·2e0a·4e69·6a65·6e62·6f72·6768·2034·2c20··..Nijenborgh·4,· | ||
00011030:·3937·3437·2041·4720·4772·6f6e·696e·6765··9747·AG·Groninge | 00011030:·3937·3437·2041·4720·4772·6f6e·696e·6765··9747·AG·Groninge | ||
00011040:·6e2c·2054·6865·204e·6574·6865·726c·616e··n,·The·Netherlan | 00011040:·6e2c·2054·6865·204e·6574·6865·726c·616e··n,·The·Netherlan | ||
00011050:·6473·2e3c·2f70·3e0a·3c2f·6469·763e·3c2f··ds.</p>.</div></ | 00011050:·6473·2e3c·2f70·3e0a·3c2f·6469·763e·3c2f··ds.</p>.</div></ | ||
00011060:·626c·6f63·6b71·756f·7465·3e0a·3c70·3ec2··blockquote>.<p>. | 00011060:·626c·6f63·6b71·756f·7465·3e0a·3c70·3ec2··blockquote>.<p>. | ||
00011070:·a920·3230·3031·20e2·8093·2032·3032·3 | 00011070:·a920·3230·3031·20e2·8093·2032·3032·363a··.·2001·...·2026: | ||
00011080:·3c2f·703e·0a3c·626c·6f63·6b71·756f·7465··</p>.<blockquote | 00011080:·3c2f·703e·0a3c·626c·6f63·6b71·756f·7465··</p>.<blockquote | ||
00011090:·3e0a·3c64·6976·3e3c·703e·5468·6520·4752··>.<div><p>The·GR | 00011090:·3e0a·3c64·6976·3e3c·703e·5468·6520·4752··>.<div><p>The·GR | ||
000110a0:·4f4d·4143·5320·6465·7665·6c6f·706d·656e··OMACS·developmen | 000110a0:·4f4d·4143·5320·6465·7665·6c6f·706d·656e··OMACS·developmen | ||
000110b0:·7420·7465·616d·7320·6174·2074·6865·2052··t·teams·at·the·R | 000110b0:·7420·7465·616d·7320·6174·2074·6865·2052··t·teams·at·the·R | ||
000110c0:·6f79·616c·2049·6e73·7469·7475·7465·206f··oyal·Institute·o | 000110c0:·6f79·616c·2049·6e73·7469·7475·7465·206f··oyal·Institute·o | ||
000110d0:·6620·5465·6368·6e6f·6c6f·6779·2061·6e64··f·Technology·and | 000110d0:·6620·5465·6368·6e6f·6c6f·6779·2061·6e64··f·Technology·and | ||
000110e0:·0a55·7070·7361·6c61·2055·6e69·7665·7273··.Uppsala·Univers | 000110e0:·0a55·7070·7361·6c61·2055·6e69·7665·7273··.Uppsala·Univers |
Offset 442, 15 lines modified | Offset 442, 15 lines modified | ||
442 | Pieter·Meulenhoff,·Teemu·Murtola,·Sander·Pronk,·Michael·Shirts,·Alfons·Sijbers, | 442 | Pieter·Meulenhoff,·Teemu·Murtola,·Sander·Pronk,·Michael·Shirts,·Alfons·Sijbers, |
443 | Balint·Soproni,·David·van·der·Spoel,·Peter·Tieleman,·Carsten·Uphoff,·Jon | 443 | Balint·Soproni,·David·van·der·Spoel,·Peter·Tieleman,·Carsten·Uphoff,·Jon |
444 | Vincent,·Teemu·Virolainen,·Christian·Wennberg,·Maarten·Wolf,·Artem·Zhmurov | 444 | Vincent,·Teemu·Virolainen,·Christian·Wennberg,·Maarten·Wolf,·Artem·Zhmurov |
445 | Project·leaders:·Berk·Hess,·Erik·Lindahl | 445 | Project·leaders:·Berk·Hess,·Erik·Lindahl |
446 | ©·1991·–·2000: | 446 | ©·1991·–·2000: |
447 | ·····Department·of·Biophysical·Chemistry,·University·of·Groningen. | 447 | ·····Department·of·Biophysical·Chemistry,·University·of·Groningen. |
448 | ·····Nijenborgh·4,·9747·AG·Groningen,·The·Netherlands. | 448 | ·····Nijenborgh·4,·9747·AG·Groningen,·The·Netherlands. |
449 | ©·2001·–·202 | 449 | ©·2001·–·2026: |
450 | ·····The·GROMACS·development·teams·at·the·Royal·Institute·of·Technology | 450 | ·····The·GROMACS·development·teams·at·the·Royal·Institute·of·Technology |
451 | ·····and·Uppsala·University,·Sweden. | 451 | ·····and·Uppsala·University,·Sweden. |
452 | This·manual·is·not·complete·and·has·no·pretension·to·be·so·due·to·lack·of·time | 452 | This·manual·is·not·complete·and·has·no·pretension·to·be·so·due·to·lack·of·time |
453 | of·the·contributors·–·our·first·priority·is·to·improve·the·software.·It·is | 453 | of·the·contributors·–·our·first·priority·is·to·improve·the·software.·It·is |
454 | worked·on·continuously,·which·in·some·cases·might·mean·the·information·is·not | 454 | worked·on·continuously,·which·in·some·cases·might·mean·the·information·is·not |
455 | entirely·correct. | 455 | entirely·correct. |
456 | Comments·on·form·and·content·are·welcome,·please·send·them·to·the·_\x8u_\x8s_\x8e_\x8r | 456 | Comments·on·form·and·content·are·welcome,·please·send·them·to·the·_\x8u_\x8s_\x8e_\x8r |
Offset 10871, 15 lines modified | Offset 10871, 15 lines modified | ||
10871 | ········"2019":·[31,·39,·194,·205,·238,·239,·240,·241,·258,·264,·265,·266,·267,·268,·281,·293,·357], | 10871 | ········"2019":·[31,·39,·194,·205,·238,·239,·240,·241,·258,·264,·265,·266,·267,·268,·281,·293,·357], |
10872 | ········"2020":·[4,·11,·15,·17,·29,·39,·194,·254,·274,·280,·281,·282,·283,·284,·285,·286,·310,·334,·357], | 10872 | ········"2020":·[4,·11,·15,·17,·29,·39,·194,·254,·274,·280,·281,·282,·283,·284,·285,·286,·310,·334,·357], |
10873 | ········"2021":·[39,·194,·265,·268,·269,·290,·296,·297,·298,·299,·300,·301,·310,·325,·357], | 10873 | ········"2021":·[39,·194,·265,·268,·269,·290,·296,·297,·298,·299,·300,·301,·310,·325,·357], |
10874 | ········"2022":·[0,·17,·28,·29,·39,·270,·284,·285,·306,·312,·313,·314,·315,·316,·317,·326,·357], | 10874 | ········"2022":·[0,·17,·28,·29,·39,·270,·284,·285,·306,·312,·313,·314,·315,·316,·317,·326,·357], |
10875 | ········"2023":·[38,·39,·123,·194,·286,·300,·301,·322,·328,·329,·330,·331,·357], | 10875 | ········"2023":·[38,·39,·123,·194,·286,·300,·301,·322,·328,·329,·330,·331,·357], |
10876 | ········"2024":·[0,·1,·2,·3,·4,·5,·6,·7,·8,·9,·10,·11,·12,·13,·14,·15,·16,·17,·18,·19,·20,·21,·22,·23,·24,·25,·26,·27,·28,·29,·30,·31,·32,·33,·34,·35,·36,·37,·38,·39,·40,·41,·42,·43,·44,·45,·46,·47,·48,·49,·50,·51,·52,·53,·54,·55,·56,·57,·58,·59,·60,·61,·62,·63,·64,·65,·66,·67,·68,·69,·70,·71,·72,·73,·74,·75,·76,·77,·78,·79,·80,·81,·82,·83,·84,·85,·86,·87,·88,·89,·90,·91,·92,·93,·94,·95,·96,·97,·98,·99,·100,·101,·102,·103,·104,·105,·106,·107,·108,·109,·110,·111,·112,·113,·114,·115,·116,·117,·118,·119,·120,·121,·122,·123,·124,·125,·126,·127,·128,·129,·130,·131,·132,·133,·134,·135,·136,·137,·138,·139,·140,·141,·142,·143,·144,·145,·146,·147,·148,·149,·150,·151,·152,·153,·154,·155,·156,·157,·158,·159,·160,·161,·162,·163,·164,·165,·166,·167,·168,·169,·170,·171,·172,·173,·174,·175,·176,·177,·178,·179,·180,·181,·182,·183,·184,·185,·186,·187,·188,·189,·190,·191,·192,·193,·194,·195,·196,·197,·198,·199,·200,·201,·202,·203,·204,·205,·206,·207,·208,·209,·210,·211,·212,·213,·214,·215,·216,·217,·218,·219,·220,·221,·222,·223,·224,·225,·226,·227,·228,·229,·230,·231,·232,·233,·234,·235,·236,·237,·238,·239,·240,·241,·242,·243,·244,·245,·246,·247,·248,·249,·250,·251,·252,·253,·254,·255,·256,·257,·258,·259,·260,·261,·262,·263,·264,·265,·266,·267,·268,·269,·270,·271,·272,·273,·274,·275,·276,·277,·278,·279,·280,·281,·282,·283,·284,·285,·286,·287,·288,·289,·290,·291,·292,·293,·294,·295,·296,·297,·298,·299,·300,·301,·302,·303,·304,·305,·306,·307,·308,·309,·310,·311,·312,·313,·314,·315,·316,·317,·318,·319,·320,·321,·322,·323,·324,·325,·326,·327,·332,·333,·335,·336,·337,·338,·339,·340,·341,·343,·344,·345,·346,·347,·348,·349,·350,·351,·352,·353,·354,·355,·356,·357,·358,·359,·360,·361], | 10876 | ········"2024":·[0,·1,·2,·3,·4,·5,·6,·7,·8,·9,·10,·11,·12,·13,·14,·15,·16,·17,·18,·19,·20,·21,·22,·23,·24,·25,·26,·27,·28,·29,·30,·31,·32,·33,·34,·35,·36,·37,·38,·39,·40,·41,·42,·43,·44,·45,·46,·47,·48,·49,·50,·51,·52,·53,·54,·55,·56,·57,·58,·59,·60,·61,·62,·63,·64,·65,·66,·67,·68,·69,·70,·71,·72,·73,·74,·75,·76,·77,·78,·79,·80,·81,·82,·83,·84,·85,·86,·87,·88,·89,·90,·91,·92,·93,·94,·95,·96,·97,·98,·99,·100,·101,·102,·103,·104,·105,·106,·107,·108,·109,·110,·111,·112,·113,·114,·115,·116,·117,·118,·119,·120,·121,·122,·123,·124,·125,·126,·127,·128,·129,·130,·131,·132,·133,·134,·135,·136,·137,·138,·139,·140,·141,·142,·143,·144,·145,·146,·147,·148,·149,·150,·151,·152,·153,·154,·155,·156,·157,·158,·159,·160,·161,·162,·163,·164,·165,·166,·167,·168,·169,·170,·171,·172,·173,·174,·175,·176,·177,·178,·179,·180,·181,·182,·183,·184,·185,·186,·187,·188,·189,·190,·191,·192,·193,·194,·195,·196,·197,·198,·199,·200,·201,·202,·203,·204,·205,·206,·207,·208,·209,·210,·211,·212,·213,·214,·215,·216,·217,·218,·219,·220,·221,·222,·223,·224,·225,·226,·227,·228,·229,·230,·231,·232,·233,·234,·235,·236,·237,·238,·239,·240,·241,·242,·243,·244,·245,·246,·247,·248,·249,·250,·251,·252,·253,·254,·255,·256,·257,·258,·259,·260,·261,·262,·263,·264,·265,·266,·267,·268,·269,·270,·271,·272,·273,·274,·275,·276,·277,·278,·279,·280,·281,·282,·283,·284,·285,·286,·287,·288,·289,·290,·291,·292,·293,·294,·295,·296,·297,·298,·299,·300,·301,·302,·303,·304,·305,·306,·307,·308,·309,·310,·311,·312,·313,·314,·315,·316,·317,·318,·319,·320,·321,·322,·323,·324,·325,·326,·327,·332,·333,·335,·336,·337,·338,·339,·340,·341,·343,·344,·345,·346,·347,·348,·349,·350,·351,·352,·353,·354,·355,·356,·357,·358,·359,·360,·361], |
10877 | ········"2025":·[222,·342], | 10877 | ········"2025":·[222,·342], |
10878 | ········"2026":·248, | 10878 | ········"2026":·[0,·1,·2,·3,·4,·5,·6,·7,·8,·9,·10,·11,·12,·13,·14,·15,·16,·17,·18,·19,·20,·21,·22,·23,·24,·25,·26,·27,·28,·29,·30,·31,·32,·33,·34,·35,·36,·37,·38,·39,·40,·41,·42,·43,·44,·45,·46,·47,·48,·49,·50,·51,·52,·53,·54,·55,·56,·57,·58,·59,·60,·61,·62,·63,·64,·65,·6[·...·truncated·by·diffoscope;·len:·1444,·SHA:·444eaffcaeaf395c7129df8a68a038146dc491c7656e03ee14928d1164a3c8aa·...·], |
10879 | ········"2027":·248, | 10879 | ········"2027":·248, |
10880 | ········"2028":·248, | 10880 | ········"2028":·248, |
10881 | ········"2029":·222, | 10881 | ········"2029":·222, |
10882 | ········"2031":·241, | 10882 | ········"2031":·241, |
10883 | ········"2032":·[50,·194,·241], | 10883 | ········"2032":·[50,·194,·241], |
10884 | ········"2033":·222, | 10884 | ········"2033":·222, |
10885 | ········"2037":·[222,·238,·249], | 10885 | ········"2037":·[222,·238,·249], |