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1 | ·e054264910bf08ed1feaf189b2f71e09·20020·contrib/science·optional·cpl-plugin-uves-calib_5.9.1+dfsg-1_all.deb | 1 | ·e054264910bf08ed1feaf189b2f71e09·20020·contrib/science·optional·cpl-plugin-uves-calib_5.9.1+dfsg-1_all.deb |
2 | ·69a2725d03c61a73e4382406c3cdbd69·1976116·debug·optional·cpl-plugin-uves-dbgsym_5.9.1+dfsg-1_i386.deb | 2 | ·69a2725d03c61a73e4382406c3cdbd69·1976116·debug·optional·cpl-plugin-uves-dbgsym_5.9.1+dfsg-1_i386.deb |
3 | · | 3 | ·28341cec6966ae6fc5b202783cf4f5b8·182324·doc·optional·cpl-plugin-uves-doc_5.9.1+dfsg-1_all.deb |
4 | ·a7838523df0f2acc3258dd63dbc3ae9e·954184·science·optional·cpl-plugin-uves_5.9.1+dfsg-1_i386.deb | 4 | ·a7838523df0f2acc3258dd63dbc3ae9e·954184·science·optional·cpl-plugin-uves_5.9.1+dfsg-1_i386.deb |
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1 | Package:·cpl-plugin-uves-doc | 1 | Package:·cpl-plugin-uves-doc |
2 | Source:·cpl-plugin-uves | 2 | Source:·cpl-plugin-uves |
3 | Version:·5.9.1+dfsg-1 | 3 | Version:·5.9.1+dfsg-1 |
4 | Architecture:·all | 4 | Architecture:·all |
5 | Maintainer:·Debian·Astronomy·Maintainers·<debian-astro-maintainers@lists.alioth.debian.org> | 5 | Maintainer:·Debian·Astronomy·Maintainers·<debian-astro-maintainers@lists.alioth.debian.org> |
6 | Installed-Size:·139 | 6 | Installed-Size:·1393 |
7 | Section:·doc | 7 | Section:·doc |
8 | Priority:·optional | 8 | Priority:·optional |
9 | Multi-Arch:·foreign | 9 | Multi-Arch:·foreign |
10 | Homepage:·https://www.eso.org/sci/software/pipelines/uves | 10 | Homepage:·https://www.eso.org/sci/software/pipelines/uves |
11 | Description:·ESO·data·reduction·pipeline·documentation·for·UVES | 11 | Description:·ESO·data·reduction·pipeline·documentation·for·UVES |
12 | ·This·package·contains·the·HTML·documentation·and·manpages·for·the·data | 12 | ·This·package·contains·the·HTML·documentation·and·manpages·for·the·data |
13 | ·reduction·pipeline·for·the·UVES·instrument·of·the·Very·Large·Telescope | 13 | ·reduction·pipeline·for·the·UVES·instrument·of·the·Very·Large·Telescope |
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85 | drwxr-xr-x···0·root·········(0)·root·········(0)········0·2018-04-27·13:52:31.000000·./usr/share/man/ | 85 | drwxr-xr-x···0·root·········(0)·root·········(0)········0·2018-04-27·13:52:31.000000·./usr/share/man/ |
86 | drwxr-xr-x···0·root·········(0)·root·········(0)········0·2018-04-27·13:52:31.000000·./usr/share/man/man7/ | 86 | drwxr-xr-x···0·root·········(0)·root·········(0)········0·2018-04-27·13:52:31.000000·./usr/share/man/man7/ |
87 | -rw-r--r--···0·root·········(0)·root·········(0)·····2906·2018-04-27·13:52:31.000000·./usr/share/man/man7/flames_cal_mkmaster.7.gz | 87 | -rw-r--r--···0·root·········(0)·root·········(0)·····2906·2018-04-27·13:52:31.000000·./usr/share/man/man7/flames_cal_mkmaster.7.gz |
88 | -rw-r--r--···0·root·········(0)·root·········(0)·····3717·2018-04-27·13:52:31.000000·./usr/share/man/man7/flames_cal_orderpos.7.gz | 88 | -rw-r--r--···0·root·········(0)·root·········(0)·····3717·2018-04-27·13:52:31.000000·./usr/share/man/man7/flames_cal_orderpos.7.gz |
89 | -rw-r--r--···0·root·········(0)·root·········(0)·····2544·2018-04-27·13:52:31.000000·./usr/share/man/man7/flames_cal_predict.7.gz | 89 | -rw-r--r--···0·root·········(0)·root·········(0)·····2544·2018-04-27·13:52:31.000000·./usr/share/man/man7/flames_cal_predict.7.gz |
90 | -rw-r--r--···0·root·········(0)·root·········(0)·····2639·2018-04-27·13:52:31.000000·./usr/share/man/man7/flames_cal_prep_sff_ofpos.7.gz | 90 | -rw-r--r--···0·root·········(0)·root·········(0)·····2639·2018-04-27·13:52:31.000000·./usr/share/man/man7/flames_cal_prep_sff_ofpos.7.gz |
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92 | -rw-r--r--···0·root·········(0)·root·········(0)·····88 | 92 | -rw-r--r--···0·root·········(0)·root·········(0)·····8833·2018-04-27·13:52:31.000000·./usr/share/man/man7/flames_obs_redchain.7.gz |
93 | -rw-r--r--···0·root·········(0)·root·········(0)·····3475·2018-04-27·13:52:31.000000·./usr/share/man/man7/flames_obs_scired.7.gz | 93 | -rw-r--r--···0·root·········(0)·root·········(0)·····3475·2018-04-27·13:52:31.000000·./usr/share/man/man7/flames_obs_scired.7.gz |
94 | -rw-r--r--···0·root·········(0)·root·········(0)·····1350·2018-04-27·13:52:31.000000·./usr/share/man/man7/flames_utl_unpack.7.gz | 94 | -rw-r--r--···0·root·········(0)·root·········(0)·····1350·2018-04-27·13:52:31.000000·./usr/share/man/man7/flames_utl_unpack.7.gz |
95 | -rw-r--r--···0·root·········(0)·root·········(0)·····2297·2018-04-27·13:52:31.000000·./usr/share/man/man7/uves_cal_cd_align.7.gz | 95 | -rw-r--r--···0·root·········(0)·root·········(0)·····2297·2018-04-27·13:52:31.000000·./usr/share/man/man7/uves_cal_cd_align.7.gz |
96 | -rw-r--r--···0·root·········(0)·root·········(0)·····2263·2018-04-27·13:52:31.000000·./usr/share/man/man7/uves_cal_mbias.7.gz | 96 | -rw-r--r--···0·root·········(0)·root·········(0)·····2263·2018-04-27·13:52:31.000000·./usr/share/man/man7/uves_cal_mbias.7.gz |
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100 | -rw-r--r--···0·root·········(0)·root·········(0)·····3039·2018-04-27·13:52:31.000000·./usr/share/man/man7/uves_cal_mkmaster.7.gz | 100 | -rw-r--r--···0·root·········(0)·root·········(0)·····3039·2018-04-27·13:52:31.000000·./usr/share/man/man7/uves_cal_mkmaster.7.gz |
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102 | -rw-r--r--···0·root·········(0)·root·········(0)·····2509·2018-04-27·13:52:31.000000·./usr/share/man/man7/uves_cal_predict.7.gz | 102 | -rw-r--r--···0·root·········(0)·root·········(0)·····2509·2018-04-27·13:52:31.000000·./usr/share/man/man7/uves_cal_predict.7.gz |
103 | -rw-r--r--···0·root·········(0)·root·········(0)·····54 | 103 | -rw-r--r--···0·root·········(0)·root·········(0)·····5480·2018-04-27·13:52:31.000000·./usr/share/man/man7/uves_cal_response.7.gz |
104 | -rw-r--r--···0·root·········(0)·root·········(0)·····5 | 104 | -rw-r--r--···0·root·········(0)·root·········(0)·····5088·2018-04-27·13:52:31.000000·./usr/share/man/man7/uves_cal_tflat.7.gz |
105 | -rw-r--r--···0·root·········(0)·root·········(0)·····543 | 105 | -rw-r--r--···0·root·········(0)·root·········(0)·····5436·2018-04-27·13:52:31.000000·./usr/share/man/man7/uves_cal_wavecal.7.gz |
106 | -rw-r--r--···0·root·········(0)·root·········(0)·····9 | 106 | -rw-r--r--···0·root·········(0)·root·········(0)·····9093·2018-04-27·13:52:31.000000·./usr/share/man/man7/uves_obs_redchain.7.gz |
107 | -rw-r--r--···0·root·········(0)·root·········(0)·····55 | 107 | -rw-r--r--···0·root·········(0)·root·········(0)·····5527·2018-04-27·13:52:31.000000·./usr/share/man/man7/uves_obs_scired.7.gz |
108 | -rw-r--r--···0·root·········(0)·root·········(0)·····1595·2018-04-27·13:52:31.000000·./usr/share/man/man7/uves_utl_ima_arith.7.gz | 108 | -rw-r--r--···0·root·········(0)·root·········(0)·····1595·2018-04-27·13:52:31.000000·./usr/share/man/man7/uves_utl_ima_arith.7.gz |
109 | -rw-r--r--···0·root·········(0)·root·········(0)·····1681·2018-04-27·13:52:31.000000·./usr/share/man/man7/uves_utl_remove_crh_single.7.gz | 109 | -rw-r--r--···0·root·········(0)·root·········(0)·····1681·2018-04-27·13:52:31.000000·./usr/share/man/man7/uves_utl_remove_crh_single.7.gz |
110 | lrwxrwxrwx···0·root·········(0)·root·········(0)········0·2018-04-27·13:52:31.000000·./usr/share/doc/cpl-plugin-uves/html/_static/doctools.js·->·../../../../javascript/sphinxdoc/1.0/doctools.js | 110 | lrwxrwxrwx···0·root·········(0)·root·········(0)········0·2018-04-27·13:52:31.000000·./usr/share/doc/cpl-plugin-uves/html/_static/doctools.js·->·../../../../javascript/sphinxdoc/1.0/doctools.js |
111 | lrwxrwxrwx···0·root·········(0)·root·········(0)········0·2018-04-27·13:52:31.000000·./usr/share/doc/cpl-plugin-uves/html/_static/jquery.js·->·../../../../javascript/sphinxdoc/1.0/jquery.js | 111 | lrwxrwxrwx···0·root·········(0)·root·········(0)········0·2018-04-27·13:52:31.000000·./usr/share/doc/cpl-plugin-uves/html/_static/jquery.js·->·../../../../javascript/sphinxdoc/1.0/jquery.js |
112 | lrwxrwxrwx···0·root·········(0)·root·········(0)········0·2018-04-27·13:52:31.000000·./usr/share/doc/cpl-plugin-uves/html/_static/searchtools.js·->·../../../../javascript/sphinxdoc/1.0/searchtools.js | 112 | lrwxrwxrwx···0·root·········(0)·root·········(0)········0·2018-04-27·13:52:31.000000·./usr/share/doc/cpl-plugin-uves/html/_static/searchtools.js·->·../../../../javascript/sphinxdoc/1.0/searchtools.js |
113 | lrwxrwxrwx···0·root·········(0)·root·········(0)········0·2018-04-27·13:52:31.000000·./usr/share/doc/cpl-plugin-uves/html/_static/underscore.js·->·../../../../javascript/sphinxdoc/1.0/underscore.js | 113 | lrwxrwxrwx···0·root·········(0)·root·········(0)········0·2018-04-27·13:52:31.000000·./usr/share/doc/cpl-plugin-uves/html/_static/underscore.js·->·../../../../javascript/sphinxdoc/1.0/underscore.js |
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62 | ····Whether·or·not·to·save·intermediate·results·to·local·directory·(bool;··default:·False)·[default=False]. | 62 | ····Whether·or·not·to·save·intermediate·results·to·local·directory·(bool;··default:·False)·[default=False]. |
63 | ..·py:attribute::·flames_obs_redchain.param.plotter | 63 | ..·py:attribute::·flames_obs_redchain.param.plotter |
64 | ····Any·plots·produced·by·the·recipe·are·redirected·to·the·command··specified·by·this·parameter.·The·plotting·command·must·contain·the··substring·'gnuplot'·and·must·be·able·to·parse·gnuplot·syntax·on·its··standard·input.·Valid·examples·of·such·a·command·may·include·'gnuplot··-persist'·and·'cat·>·mygnuplot$$.gp'.·A·finer·control·of·the·plotting··options·can·be·obtained·by·writing·an·executable·script,·e.g.··my_gnuplot.pl,·that·executes·gnuplot·after·setting·the·desired·gnuplot··options·(e.g.·set·terminal·pslatex·color).·To·turn·off·plotting,·set··this·parameter·to·'no'·(str;·default:·'no')·[default="no"]. | 64 | ····Any·plots·produced·by·the·recipe·are·redirected·to·the·command··specified·by·this·parameter.·The·plotting·command·must·contain·the··substring·'gnuplot'·and·must·be·able·to·parse·gnuplot·syntax·on·its··standard·input.·Valid·examples·of·such·a·command·may·include·'gnuplot··-persist'·and·'cat·>·mygnuplot$$.gp'.·A·finer·control·of·the·plotting··options·can·be·obtained·by·writing·an·executable·script,·e.g.··my_gnuplot.pl,·that·executes·gnuplot·after·setting·the·desired·gnuplot··options·(e.g.·set·terminal·pslatex·color).·To·turn·off·plotting,·set··this·parameter·to·'no'·(str;·default:·'no')·[default="no"]. |
65 | ..·py:attribute::·flames_obs_redchain.param.process_chip | 65 | ..·py:attribute::·flames_obs_redchain.param.process_chip |
66 | ····For·RED·arm·data·process·the·redl,·redu,·or·both·chip(s)·(str;··default:·'both')·[default="both"]. | 66 | ····For·RED·arm·data·process·the·redl,·redu,·or·both·chip(s)·(str;··default:·'both')·[default="both"]. |
67 | ..·py:attribute::·flames_obs_redchain.param.flames_cal_orderpos.use_guess_tab | ||
68 | ····If·a·Guess·order·table·is·provided·this·parameter·set·how·it·is··used:0:·No·usage,·1:·use·it·to·set·lower/upper·Y·raws·where·order·are··searched·2:·the·order·table·try·to·fully·match·the·guess·(int;··default:·1)·[default=1]. | ||
69 | ..·py:attribute::·flames_obs_redchain.param.flames_cal_orderpos.radx | ||
70 | ····Half·X·size·of·median·filtering·window·(int;·default:·2)·[default=2]. | ||
71 | ..·py:attribute::·flames_obs_redchain.param.flames_cal_orderpos.rady | ||
72 | ····Half·Y·size·of·median·filtering·window·(int;·default:·1)·[default=1]. | ||
73 | ..·py:attribute::·flames_obs_redchain.param.flames_cal_orderpos.mmethod | ||
74 | ····Background·subtraction·method.·If·equal·to·'median'·the·background·is··sampled·using·the·median·of·a·sub-window.·If·'minimum',·the·minimum··sub-window·value·is·used.·If·'no',·no·background·subtraction·is·done.··(str;·default:·'median')·[default="median"]. | ||
75 | ..·py:attribute::·flames_obs_redchain.param.flames_cal_orderpos.backsubgrid | ||
76 | ····Number·of·grid·points·(in·x-·and·y-direction)·used·to·estimate·the··background·(mode=poly).·(int;·default:·50)·[default=50]. | ||
77 | ..·py:attribute::·flames_obs_redchain.param.flames_cal_orderpos.backsubradiusy | ||
78 | ····The·height·(in·pixels)·of·the·background·sampling·window·is·(2*radiusy··+·1).·This·parameter·is·not·corrected·for·binning.·(int;·default:·2)·[default=2]. | ||
79 | ..·py:attribute::·flames_obs_redchain.param.flames_cal_orderpos.backsubkappa | ||
80 | ····The·value·of·kappa·in·the·one-sided·kappa-sigma·clipping·used·to··estimate·the·background·(mode=poly).·(float;·default:·4.0)·[default=4.0]. | ||
81 | ..·py:attribute::·flames_obs_redchain.param.flames_cal_orderpos.backsubdegx | ||
82 | ····Degree·(in·x)·of·polynomial·used·to·estimate·the·background··(mode=poly).·(int;·default:·2)·[default=2]. | ||
83 | ..·py:attribute::·flames_obs_redchain.param.flames_cal_orderpos.backsubdegy | ||
84 | ····Degree·(in·y)·of·polynomial·used·to·estimate·the·background··(mode=poly).·(int;·default:·2)·[default=2]. | ||
85 | ..·py:attribute::·flames_obs_redchain.param.flames_cal_orderpos.samplewidth | ||
86 | ····Separation·of·sample·traces·(used·by·Hough·transform)·in·input·image··(int;·default:·50)·[default=50]. | ||
87 | ..·py:attribute::·flames_obs_redchain.param.flames_cal_orderpos.minslope | ||
88 | ····Minimum·possible·line·slope.·This·should·be·the·'physical'·slope·on··the·chip,·i.e.·not·taking·binning·factors·into·account,·which·is··handled·by·the·recipe·(float;·default:·0.0)·[default=0.0]. | ||
89 | ..·py:attribute::·flames_obs_redchain.param.flames_cal_orderpos.maxslope | ||
90 | ····Maximum·possible·line·slope·(float;·default:·0.2)·[default=0.2]. | ||
91 | ..·py:attribute::·flames_obs_redchain.param.flames_cal_orderpos.sloperes | ||
92 | ····Resolution·(width·in·pixels)·of·Hough·space·(int;·default:·120)·[default=120]. | ||
93 | ..·py:attribute::·flames_obs_redchain.param.flames_cal_orderpos.pthres | ||
94 | ····In·automatic·mode,·or·if·the·number·of·orders·to·detect·is·read·from·a··guess·table,·the·detection·of·new·lines·stops·when·the·intensity·of·a··candidate·line·drops·to·less·than·'pthres'·times·the·intensity·of·the··previous·detection.··(float;·default:·0.2)·[default=0.2]. | ||
95 | ..·py:attribute::·flames_obs_redchain.param.flames_cal_orderpos.tracestep | ||
96 | ····The·step·size·used·when·tracing·the·orders·(int;·default:·10)·[default=10]. | ||
97 | ..·py:attribute::·flames_obs_redchain.param.flames_cal_orderpos.minthresh | ||
98 | ····The·minimum·threshold·value·is·(min·+·minthres*(max·-·min)).·Here··'min'·and·'max'·are·the·lowest·and·highest·pixel·values·in·the·central··bin·of·the·order·(float;·default:·0.2)·[default=0.2]. | ||
99 | ..·py:attribute::·flames_obs_redchain.param.flames_cal_orderpos.maxgap | ||
100 | ····If·the·order·line·drops·below·detection·threshold,·the·order·tracing··algorithm·will·try·to·jump·a·gap·of·maximum·size·'maxgap'·multiplied··by·the·image·width·(float;·default:·0.2)·[default=0.2]. | ||
101 | ..·py:attribute::·flames_obs_redchain.param.flames_cal_orderpos.maxrms | ||
102 | ····When·fitting·the·orders·with·straight·lines,·this·is·the·maximum··allowed·RMS·relative·to·the·median·RMS·of·all·orders·(float;·default:··100.0)·[default=100.0]. | ||
103 | ..·py:attribute::·flames_obs_redchain.param.flames_cal_orderpos.defpol1 | ||
104 | ····The·degree·of·the·bivarite·fit·(cross·dispersion·direction).·If··negative,·the·degree·is·optimized·to·give·the·best·fit·(int;·default:··-1)·[default=-1]. | ||
105 | ..·py:attribute::·flames_obs_redchain.param.flames_cal_orderpos.defpol2 | ||
106 | ····The·degree·of·the·bivarite·fit·(order·number).·If·negative,·the·degree··is·optimized·to·give·the·best·fit·(int;·default:·-1)·[default=-1]. | ||
107 | ..·py:attribute::·flames_obs_redchain.param.flames_cal_orderpos.kappa | ||
108 | ····Used·for·kappa-sigma·clipping·of·the·final·polynomial·fit.·If··negative,·no·clipping·is·done·(float;·default:·4.0)·[default=4.0]. | ||
109 | ..·py:attribute::·flames_obs_redchain.param.uves_cal_mflat.norm_method | ||
110 | ····Method·used·to·build·master·frame··(str;·default:·'explevel')·[default="explevel"]. | ||
111 | ..·py:attribute::·flames_obs_redchain.param.uves_cal_mflat.backsub.mmethod | ||
112 | ····Background·measuring·method.·If·equal·to·'median'·the·background·is··sampled·using·the·median·of·a·subwindow.·If·'minimum',·the·subwindow··minimum·value·is·used.·If·'no',·no·background·subtraction·is·done.··(str;·default:·'median')·[default="median"]. | ||
113 | ..·py:attribute::·flames_obs_redchain.param.uves_cal_mflat.backsub.npoints | ||
114 | ····This·is·the·number·of·columns·in·interorder·space·used·to·sample·the··background.·(int;·default:·82)·[default=82]. | ||
115 | ..·py:attribute::·flames_obs_redchain.param.uves_cal_mflat.backsub.radiusy | ||
116 | ····The·height·(in·pixels)·of·the·background·sampling·window·is·(2*radiusy··+·1).·This·parameter·is·not·corrected·for·binning.·(int;·default:·2)·[default=2]. | ||
117 | ..·py:attribute::·flames_obs_redchain.param.uves_cal_mflat.backsub.sdegree | ||
118 | ····Degree·of·interpolating·splines.·Currently·only·degree·=·1·is··supported·(int;·default:·1)·[default=1]. | ||
119 | ..·py:attribute::·flames_obs_redchain.param.uves_cal_mflat.backsub.smoothx | ||
120 | ····If·spline·interpolation·is·used·to·measure·the·background,·the··x-radius·of·the·post-smoothing·window·is·(smoothx·*·image_width).··Here,·'image_width'·is·the·image·width·after·binning.·If·negative,·the··default·values·are·used:·(25.0/4096)·for·blue·flat-field·frames,··(50.0/4096)·for·red·flat-field·frames,·(300.0/4096)·for·blue·science··frames·and·(300.0/4096)·for·red·science·frames.·(float;·default:·-1.0)·[default=-1.0]. | ||
121 | ..·py:attribute::·flames_obs_redchain.param.uves_cal_mflat.backsub.smoothy | ||
122 | ····If·spline·interpolation·is·used·to·measure·the·background,·the··y-radius·of·the·post-smoothing·window·is·(smoothy·*·image_height).··Here,·'image_height'·is·the·image·height·after·binning.·If·negative,··the·default·values·are·used:·(100.0/2048)·for·blue·flat-field·frames,··(300.0/2048)·for·red·flat-field·frames,·(200.0/2048)·for·blue·science··frames·and·(500.0/2048)·for·red·science·frames.·(float;·default:·-1.0)·[default=-1.0]. | ||
67 | ..·py:attribute::·flames_obs_redchain.param.flames_cal_prep_sff_ofpos.ext_method | 123 | ..·py:attribute::·flames_obs_redchain.param.flames_cal_prep_sff_ofpos.ext_method |
68 | ····Extraction·method·(str;·default:·'opt')·[default="opt"]. | 124 | ····Extraction·method·(str;·default:·'opt')·[default="opt"]. |
69 | ..·py:attribute::·flames_obs_redchain.param.flames_cal_prep_sff_ofpos.bias_method | 125 | ..·py:attribute::·flames_obs_redchain.param.flames_cal_prep_sff_ofpos.bias_method |
70 | ····Bias·subtraction·method,·M·for·master·bias·frame,·N·for·no·bias··subtraction,·V·to·subtract·a·constant·bias·level·defined·by·the··parameter·bias_value·(str;·default:·'M')·[default="M"]. | 126 | ····Bias·subtraction·method,·M·for·master·bias·frame,·N·for·no·bias··subtraction,·V·to·subtract·a·constant·bias·level·defined·by·the··parameter·bias_value·(str;·default:·'M')·[default="M"]. |
71 | ..·py:attribute::·flames_obs_redchain.param.flames_cal_prep_sff_ofpos.bias_value | 127 | ..·py:attribute::·flames_obs_redchain.param.flames_cal_prep_sff_ofpos.bias_value |
Offset 158, 74 lines modified | Offset 242, 14 lines modified | ||
158 | ····In·optimal·extraction·mode,·the·sky·subtraction·method·to·use.··'median'·estimates·the·sky·as·the·median·of·pixels·along·the·slit··(ignoring·pixels·close·to·the·object),·whereas·'optimal'·does·a·chi··square·minimization·along·the·slit·to·obtain·the·best·combined·object··and·sky·levels.·The·optimal·method·gives·the·most·accurate·sky··determination·but·is·also·a·bit·slower·than·the·median·method·(str;··default:·'optimal')·[default="optimal"]. | 242 | ····In·optimal·extraction·mode,·the·sky·subtraction·method·to·use.··'median'·estimates·the·sky·as·the·median·of·pixels·along·the·slit··(ignoring·pixels·close·to·the·object),·whereas·'optimal'·does·a·chi··square·minimization·along·the·slit·to·obtain·the·best·combined·object··and·sky·levels.·The·optimal·method·gives·the·most·accurate·sky··determination·but·is·also·a·bit·slower·than·the·median·method·(str;··default:·'optimal')·[default="optimal"]. |
159 | ..·py:attribute::·flames_obs_redchain.param.flames_cal_wavecal.extract.oversample | 243 | ..·py:attribute::·flames_obs_redchain.param.flames_cal_wavecal.extract.oversample |
160 | ····The·oversampling·factor·used·for·the·virtual·resampling·algorithm.·If··negative,·the·value·5·is·used·for·S/N·<=200,·and·the·value·10·is·used··if·the·estimated·S/N·is·>·200·(int;·default:·-1)·[default=-1]. | 244 | ····The·oversampling·factor·used·for·the·virtual·resampling·algorithm.·If··negative,·the·value·5·is·used·for·S/N·<=200,·and·the·value·10·is·used··if·the·estimated·S/N·is·>·200·(int;·default:·-1)·[default=-1]. |
161 | ..·py:attribute::·flames_obs_redchain.param.flames_cal_wavecal.extract.best | 245 | ..·py:attribute::·flames_obs_redchain.param.flames_cal_wavecal.extract.best |
162 | ····(optimal·extraction·only)·If·false·(fastest),·the·spectrum·is··extracted·only·once.·If·true·(best),·the·spectrum·is·extracted·twice,··the·second·time·using·improved·variance·estimates·based·on·the·first··iteration.·Better·variance·estimates·slightly·improve·the·obtained··signal·to·noise·but·at·the·cost·of·increased·execution·time·(bool;··default:·True)·[default=True]. | 246 | ····(optimal·extraction·only)·If·false·(fastest),·the·spectrum·is··extracted·only·once.·If·true·(best),·the·spectrum·is·extracted·twice,··the·second·time·using·improved·variance·estimates·based·on·the·first··iteration.·Better·variance·estimates·slightly·improve·the·obtained··signal·to·noise·but·at·the·cost·of·increased·execution·time·(bool;··default:·True)·[default=True]. |
163 | ..·py:attribute::·flames_obs_redchain.param.uves_cal_mbias.clean_traps | ||
164 | ····Clean·detector·traps.·If·TRUE·detector·traps·are·interpolated.The·bad··pixels·are·replaced·by·the·average·of·thenearest·good·pixels·in·the··same·column,·or·simply·marked·as·bad.·The·positions·of·bad·pixels·are··hard-coded·(as·function·of·UVES·chip).·(bool;·default:·False)·[default=False]. | ||
165 | ..·py:attribute::·flames_obs_redchain.param.uves_cal_mbias.stack_method | ||
166 | ····Method·used·to·build·master·frame··(str;·default:·'median')·[default="median"]. | ||
167 | ..·py:attribute::·flames_obs_redchain.param.uves_cal_mbias.klow | ||
168 | ····Kappa·used·to·clip·low·level·values,·when·method·is·set·to·'mean'··(float;·default:·5.0)·[default=5.0]. | ||
169 | ..·py:attribute::·flames_obs_redchain.param.uves_cal_mbias.khigh | ||
170 | ····Kappa·used·to·clip·high·level·values,·when·method·is·set·to·'mean'··(float;·default:·5.0)·[default=5.0]. | ||
171 | ..·py:attribute::·flames_obs_redchain.param.uves_cal_mbias.niter | ||
172 | ····Number·of·kappa·sigma·iterations,·when·method·is·set·to·'mean'··(int;··default:·5)·[default=5]. | ||
173 | ..·py:attribute::·flames_obs_redchain.param.uves_cal_mdark.stack_method | ||
174 | ····Method·used·to·build·master·frame··(str;·default:·'median')·[default="median"]. | ||
175 | ..·py:attribute::·flames_obs_redchain.param.uves_cal_mdark.klow | ||
176 | ····Kappa·used·to·clip·low·level·values,·when·method·is·set·to·'mean'··(float;·default:·5.0)·[default=5.0]. | ||
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75 | ····For·RED·arm·data·process·the·redl,·redu,·or·both·chip(s)·(str;··default:·'both')·[default="both"]. | 75 | ····For·RED·arm·data·process·the·redl,·redu,·or·both·chip(s)·(str;··default:·'both')·[default="both"]. |
76 | ..·py:attribute::·uves_cal_mkmaster.param.clean_traps | 76 | ..·py:attribute::·uves_cal_mkmaster.param.clean_traps |
77 | ····Clean·detector·traps.·If·TRUE·detector·traps·are·interpolated.The·bad··pixels·are·replaced·by·the·average·of·thenearest·good·pixels·in·the··same·column,·or·simply·marked·as·bad.·The·positions·of·bad·pixels·are··hard-coded·(as·function·of·UVES·chip).·(bool;·default:·False)·[default=False]. | 77 | ····Clean·detector·traps.·If·TRUE·detector·traps·are·interpolated.The·bad··pixels·are·replaced·by·the·average·of·thenearest·good·pixels·in·the··same·column,·or·simply·marked·as·bad.·The·positions·of·bad·pixels·are··hard-coded·(as·function·of·UVES·chip).·(bool;·default:·False)·[default=False]. |
78 | ..·py:attribute::·uves_cal_mkmaster.param.norm_method | 78 | ..·py:attribute::·uves_cal_mkmaster.param.norm_method |
79 | ····Method·used·to·build·master·frame··(str;·default:·'explevel')·[default="explevel"]. | 79 | ····Method·used·to·build·master·frame··(str;·default:·'explevel')·[default="explevel"]. |
80 | ..·py:attribute::·uves_cal_mkmaster.param.backsub.mmethod | ||
81 | ····Background·measuring·method.·If·equal·to·'median'·the·background·is··sampled·using·the·median·of·a·subwindow.·If·'minimum',·the·subwindow··minimum·value·is·used.·If·'no',·no·background·subtraction·is·done.··(str;·default:·'median')·[default="median"]. | ||
82 | ..·py:attribute::·uves_cal_mkmaster.param.backsub.npoints | ||
83 | ····This·is·the·number·of·columns·in·interorder·space·used·to·sample·the··background.·(int;·default:·82)·[default=82]. | ||
84 | ..·py:attribute::·uves_cal_mkmaster.param.backsub.radiusy | ||
85 | ····The·height·(in·pixels)·of·the·background·sampling·window·is·(2*radiusy··+·1).·This·parameter·is·not·corrected·for·binning.·(int;·default:·2)·[default=2]. | ||
86 | ..·py:attribute::·uves_cal_mkmaster.param.backsub.sdegree | ||
87 | ····Degree·of·interpolating·splines.·Currently·only·degree·=·1·is··supported·(int;·default:·1)·[default=1]. | ||
88 | ..·py:attribute::·uves_cal_mkmaster.param.backsub.smoothx | ||
89 | ····If·spline·interpolation·is·used·to·measure·the·background,·the··x-radius·of·the·post-smoothing·window·is·(smoothx·*·image_width).··Here,·'image_width'·is·the·image·width·after·binning.·If·negative,·the··default·values·are·used:·(25.0/4096)·for·blue·flat-field·frames,··(50.0/4096)·for·red·flat-field·frames,·(300.0/4096)·for·blue·science··frames·and·(300.0/4096)·for·red·science·frames.·(float;·default:·-1.0)·[default=-1.0]. | ||
90 | ..·py:attribute::·uves_cal_mkmaster.param.backsub.smoothy | ||
91 | ····If·spline·interpolation·is·used·to·measure·the·background,·the··y-radius·of·the·post-smoothing·window·is·(smoothy·*·image_height).··Here,·'image_height'·is·the·image·height·after·binning.·If·negative,··the·default·values·are·used:·(100.0/2048)·for·blue·flat-field·frames,··(300.0/2048)·for·red·flat-field·frames,·(200.0/2048)·for·blue·science··frames·and·(500.0/2048)·for·red·science·frames.·(float;·default:·-1.0)·[default=-1.0]. | ||
92 | ..·py:attribute::·uves_cal_mkmaster.param.qc_dark.reg.num_x | 80 | ..·py:attribute::·uves_cal_mkmaster.param.qc_dark.reg.num_x |
93 | ····Number·of·regions·along·the·X·axis·(where·mean/med/rms·are·computed).··(int;·default:·4)·[default=4]. | 81 | ····Number·of·regions·along·the·X·axis·(where·mean/med/rms·are·computed).··(int;·default:·4)·[default=4]. |
94 | ..·py:attribute::·uves_cal_mkmaster.param.qc_dark.reg.num_y | 82 | ..·py:attribute::·uves_cal_mkmaster.param.qc_dark.reg.num_y |
95 | ····Number·of·regions·along·the·Y·axis(where·mean/med/rms·are·computed).··(int;·default:·4)·[default=4]. | 83 | ····Number·of·regions·along·the·Y·axis(where·mean/med/rms·are·computed).··(int;·default:·4)·[default=4]. |
96 | ..·py:attribute::·uves_cal_mkmaster.param.qc_dark.reg.box_sx | 84 | ..·py:attribute::·uves_cal_mkmaster.param.qc_dark.reg.box_sx |
Offset 114, 14 lines modified | Offset 96, 32 lines modified | ||
114 | ····X·distance·between·the·left·hand·side·of·the·detector·and·the·left··hand·side·of·the·region·[pix]·(int;·default:·100)·[default=100]. | 96 | ····X·distance·between·the·left·hand·side·of·the·detector·and·the·left··hand·side·of·the·region·[pix]·(int;·default:·100)·[default=100]. |
115 | ..·py:attribute::·uves_cal_mkmaster.param.qc_dark.reg.border_y | 97 | ..·py:attribute::·uves_cal_mkmaster.param.qc_dark.reg.border_y |
116 | ····X·distance·between·the·left·hand·side·of·the·detector·and·the·left··hand·side·of·the·region·[pix]·(int;·default:·100)·[default=100]. | 98 | ····X·distance·between·the·left·hand·side·of·the·detector·and·the·left··hand·side·of·the·region·[pix]·(int;·default:·100)·[default=100]. |
117 | ..·py:attribute::·uves_cal_mkmaster.param.qc_dark.reg.when | 99 | ..·py:attribute::·uves_cal_mkmaster.param.qc_dark.reg.when |
118 | ····When·QC·analysis·is·performed.·0:·on·each·raw·frame·or·1:·on·the··master·frame·(int;·default:·0)·[default=0]. | 100 | ····When·QC·analysis·is·performed.·0:·on·each·raw·frame·or·1:·on·the··master·frame·(int;·default:·0)·[default=0]. |
101 | ..·py:attribute::·uves_cal_mkmaster.param.backsub.mmethod | ||
102 | ····Background·measuring·method.·If·equal·to·'median'·the·background·is··sampled·using·the·median·of·a·subwindow.·If·'minimum',·the·subwindow··minimum·value·is·used.·If·'no',·no·background·subtraction·is·done.··(str;·default:·'median')·[default="median"]. | ||
103 | ..·py:attribute::·uves_cal_mkmaster.param.backsub.npoints | ||
104 | ····This·is·the·number·of·columns·in·interorder·space·used·to·sample·the··background.·(int;·default:·82)·[default=82]. | ||
105 | ..·py:attribute::·uves_cal_mkmaster.param.backsub.radiusy | ||
106 | ····The·height·(in·pixels)·of·the·background·sampling·window·is·(2*radiusy··+·1).·This·parameter·is·not·corrected·for·binning.·(int;·default:·2)·[default=2]. | ||
107 | ..·py:attribute::·uves_cal_mkmaster.param.backsub.sdegree | ||
108 | ····Degree·of·interpolating·splines.·Currently·only·degree·=·1·is··supported·(int;·default:·1)·[default=1]. | ||
109 | ..·py:attribute::·uves_cal_mkmaster.param.backsub.smoothx | ||
110 | ····If·spline·interpolation·is·used·to·measure·the·background,·the··x-radius·of·the·post-smoothing·window·is·(smoothx·*·image_width).··Here,·'image_width'·is·the·image·width·after·binning.·If·negative,·the··default·values·are·used:·(25.0/4096)·for·blue·flat-field·frames,··(50.0/4096)·for·red·flat-field·frames,·(300.0/4096)·for·blue·science··frames·and·(300.0/4096)·for·red·science·frames.·(float;·default:·-1.0)·[default=-1.0]. | ||
111 | ..·py:attribute::·uves_cal_mkmaster.param.backsub.smoothy | ||
112 | ····If·spline·interpolation·is·used·to·measure·the·background,·the··y-radius·of·the·post-smoothing·window·is·(smoothy·*·image_height).··Here,·'image_height'·is·the·image·height·after·binning.·If·negative,··the·default·values·are·used:·(100.0/2048)·for·blue·flat-field·frames,··(300.0/2048)·for·red·flat-field·frames,·(200.0/2048)·for·blue·science··frames·and·(500.0/2048)·for·red·science·frames.·(float;·default:·-1.0)·[default=-1.0]. | ||
119 | The·following·code·snippet·shows·the·default·settings·for·the·available· | 113 | The·following·code·snippet·shows·the·default·settings·for·the·available· |
120 | parameters. | 114 | parameters. |
121 | :: | 115 | :: |
Offset 140, 27 lines modified | Offset 140, 27 lines modified | ||
140 | ···uves_cal_mkmaster.param.khigh·=·5.0 | 140 | ···uves_cal_mkmaster.param.khigh·=·5.0 |
141 | ···uves_cal_mkmaster.param.niter·=·5 | 141 | ···uves_cal_mkmaster.param.niter·=·5 |
142 | ···uves_cal_mkmaster.param.debug·=·False | 142 | ···uves_cal_mkmaster.param.debug·=·False |
143 | ···uves_cal_mkmaster.param.plotter·=·"no" | 143 | ···uves_cal_mkmaster.param.plotter·=·"no" |
144 | ···uves_cal_mkmaster.param.process_chip·=·"both" | 144 | ···uves_cal_mkmaster.param.process_chip·=·"both" |
145 | ···uves_cal_mkmaster.param.clean_traps·=·False | 145 | ···uves_cal_mkmaster.param.clean_traps·=·False |
146 | ···uves_cal_mkmaster.param.norm_method·=·"explevel" | 146 | ···uves_cal_mkmaster.param.norm_method·=·"explevel" |
147 | ···uves_cal_mkmaster.param.backsub.mmethod·=·"median" | ||
148 | ···uves_cal_mkmaster.param.backsub.npoints·=·82 | ||
149 | ···uves_cal_mkmaster.param.backsub.radiusy·=·2 | ||
150 | ···uves_cal_mkmaster.param.backsub.sdegree·=·1 | ||
151 | ···uves_cal_mkmaster.param.backsub.smoothx·=·-1.0 | ||
152 | ···uves_cal_mkmaster.param.backsub.smoothy·=·-1.0 | ||
153 | ···uves_cal_mkmaster.param.qc_dark.reg.num_x·=·4 | 147 | ···uves_cal_mkmaster.param.qc_dark.reg.num_x·=·4 |
154 | ···uves_cal_mkmaster.param.qc_dark.reg.num_y·=·4 | 148 | ···uves_cal_mkmaster.param.qc_dark.reg.num_y·=·4 |
155 | ···uves_cal_mkmaster.param.qc_dark.reg.box_sx·=·100 | 149 | ···uves_cal_mkmaster.param.qc_dark.reg.box_sx·=·100 |
156 | ···uves_cal_mkmaster.param.qc_dark.reg.box_sy·=·100 | 150 | ···uves_cal_mkmaster.param.qc_dark.reg.box_sy·=·100 |
157 | ···uves_cal_mkmaster.param.qc_dark.reg.border_x·=·100 | 151 | ···uves_cal_mkmaster.param.qc_dark.reg.border_x·=·100 |
158 | ···uves_cal_mkmaster.param.qc_dark.reg.border_y·=·100 | 152 | ···uves_cal_mkmaster.param.qc_dark.reg.border_y·=·100 |
159 | ···uves_cal_mkmaster.param.qc_dark.reg.when·=·0 | 153 | ···uves_cal_mkmaster.param.qc_dark.reg.when·=·0 |
154 | ···uves_cal_mkmaster.param.backsub.mmethod·=·"median" | ||
155 | ···uves_cal_mkmaster.param.backsub.npoints·=·82 | ||
156 | ···uves_cal_mkmaster.param.backsub.radiusy·=·2 | ||
157 | ···uves_cal_mkmaster.param.backsub.sdegree·=·1 | ||
158 | ···uves_cal_mkmaster.param.backsub.smoothx·=·-1.0 | ||
159 | ···uves_cal_mkmaster.param.backsub.smoothy·=·-1.0 | ||
160 | You·may·also·set·or·overwrite·some·or·all·parameters·by·the·recipe· | 160 | You·may·also·set·or·overwrite·some·or·all·parameters·by·the·recipe· |
161 | parameter·`param`,·as·shown·in·the·following·example: | 161 | parameter·`param`,·as·shown·in·the·following·example: |
162 | :: | 162 | :: |
Offset 62, 110 lines modified | Offset 62, 14 lines modified | ||
62 | ····Whether·or·not·to·save·intermediate·results·to·local·directory·(bool;··default:·False)·[default=False]. | 62 | ····Whether·or·not·to·save·intermediate·results·to·local·directory·(bool;··default:·False)·[default=False]. |
63 | ..·py:attribute::·uves_obs_redchain.param.plotter | 63 | ..·py:attribute::·uves_obs_redchain.param.plotter |
64 | ····Any·plots·produced·by·the·recipe·are·redirected·to·the·command··specified·by·this·parameter.·The·plotting·command·must·contain·the··substring·'gnuplot'·and·must·be·able·to·parse·gnuplot·syntax·on·its··standard·input.·Valid·examples·of·such·a·command·may·include·'gnuplot··-persist'·and·'cat·>·mygnuplot$$.gp'.·A·finer·control·of·the·plotting··options·can·be·obtained·by·writing·an·executable·script,·e.g.··my_gnuplot.pl,·that·executes·gnuplot·after·setting·the·desired·gnuplot··options·(e.g.·set·terminal·pslatex·color).·To·turn·off·plotting,·set··this·parameter·to·'no'·(str;·default:·'no')·[default="no"]. | 64 | ····Any·plots·produced·by·the·recipe·are·redirected·to·the·command··specified·by·this·parameter.·The·plotting·command·must·contain·the··substring·'gnuplot'·and·must·be·able·to·parse·gnuplot·syntax·on·its··standard·input.·Valid·examples·of·such·a·command·may·include·'gnuplot··-persist'·and·'cat·>·mygnuplot$$.gp'.·A·finer·control·of·the·plotting··options·can·be·obtained·by·writing·an·executable·script,·e.g.··my_gnuplot.pl,·that·executes·gnuplot·after·setting·the·desired·gnuplot··options·(e.g.·set·terminal·pslatex·color).·To·turn·off·plotting,·set··this·parameter·to·'no'·(str;·default:·'no')·[default="no"]. |
65 | ..·py:attribute::·uves_obs_redchain.param.process_chip | 65 | ..·py:attribute::·uves_obs_redchain.param.process_chip |
66 | ····For·RED·arm·data·process·the·redl,·redu,·or·both·chip(s)·(str;··default:·'both')·[default="both"]. | 66 | ····For·RED·arm·data·process·the·redl,·redu,·or·both·chip(s)·(str;··default:·'both')·[default="both"]. |
67 | ..·py:attribute::·uves_obs_redchain.param.uves_cal_predict.mbox_x | ||
68 | ····Match·box·X·size·(int;·default:·40)·[default=40]. | ||
69 | ..·py:attribute::·uves_obs_redchain.param.uves_cal_predict.mbox_y | ||
70 | ····Match·box·Y·size·(int;·default:·40)·[default=40]. | ||
71 | ..·py:attribute::·uves_obs_redchain.param.uves_cal_predict.trans_x | ||
72 | ····Detector·translation·along·X·(float;·default:·0.0)·[default=0.0]. | ||
73 | ..·py:attribute::·uves_obs_redchain.param.uves_cal_predict.trans_y | ||
74 | ····Detector·translation·along·Y·(float;·default:·0.0)·[default=0.0]. | ||
75 | ..·py:attribute::·uves_obs_redchain.param.uves_cal_predict.ech_angle_off | ||
76 | ····Offset·on·echelle·angle·(float;·default:·0.0)·[default=0.0]. | ||
77 | ..·py:attribute::·uves_obs_redchain.param.uves_cal_predict.cd_angle_off | ||
78 | ····Offset·on·cross·disperser·angle·(float;·default:·0.0)·[default=0.0]. | ||
79 | ..·py:attribute::·uves_obs_redchain.param.uves_cal_predict.ccd_rot_angle_off | ||
80 | ····Offset·on·CCD·rotation·angle·(float;·default:·0.0)·[default=0.0]. | ||
81 | ..·py:attribute::·uves_obs_redchain.param.uves_cal_predict.compute_regression_sw | ||
82 | ····Compute·regression?·(bool;·default:·True)·[default=True]. | ||
83 | ..·py:attribute::·uves_obs_redchain.param.uves_cal_predict.def_pol1 | ||
84 | ····Polynomial·X·deg·(int;·default:·4)·[default=4]. | ||
85 | ..·py:attribute::·uves_obs_redchain.param.uves_cal_predict.def_pol2 | ||
86 | ····Polynomial·Y·deg·(int;·default:·5)·[default=5]. | ||
87 | ..·py:attribute::·uves_obs_redchain.param.uves_cal_predict.kappa | ||
88 | ····Kappa·value·in·kappa·sigma·clipping·on·RESIDUAL·between·YFIT·and·Y··columns·(float;·default:·4.5)·[default=4.5]. | ||
89 | ..·py:attribute::·uves_obs_redchain.param.uves_cal_predict.tol | ||
90 | ····Tolerance·in·kappa·sigma·clipping·on·RESIDUAL·between·YFIT·and·Y··columns·(float;·default:·2.0)·[default=2.0]. | ||
91 | ..·py:attribute::·uves_obs_redchain.param.uves_cal_mbias.clean_traps | ||
92 | ····Clean·detector·traps.·If·TRUE·detector·traps·are·interpolated.The·bad··pixels·are·replaced·by·the·average·of·thenearest·good·pixels·in·the··same·column,·or·simply·marked·as·bad.·The·positions·of·bad·pixels·are··hard-coded·(as·function·of·UVES·chip).·(bool;·default:·False)·[default=False]. | ||
93 | ..·py:attribute::·uves_obs_redchain.param.uves_cal_mbias.stack_method | ||
94 | ····Method·used·to·build·master·frame··(str;·default:·'median')·[default="median"]. | ||
95 | ..·py:attribute::·uves_obs_redchain.param.uves_cal_mbias.klow | ||
96 | ····Kappa·used·to·clip·low·level·values,·when·method·is·set·to·'mean'··(float;·default:·5.0)·[default=5.0]. | ||
97 | ..·py:attribute::·uves_obs_redchain.param.uves_cal_mbias.khigh | ||
98 | ····Kappa·used·to·clip·high·level·values,·when·method·is·set·to·'mean'··(float;·default:·5.0)·[default=5.0]. | ||
99 | ..·py:attribute::·uves_obs_redchain.param.uves_cal_mbias.niter | ||
100 | ····Number·of·kappa·sigma·iterations,·when·method·is·set·to·'mean'··(int;··default:·5)·[default=5]. | ||
101 | ..·py:attribute::·uves_obs_redchain.param.uves_cal_mdark.stack_method | ||
102 | ····Method·used·to·build·master·frame··(str;·default:·'median')·[default="median"]. | ||
103 | ..·py:attribute::·uves_obs_redchain.param.uves_cal_mdark.klow | ||
104 | ····Kappa·used·to·clip·low·level·values,·when·method·is·set·to·'mean'··(float;·default:·5.0)·[default=5.0]. | ||
105 | ..·py:attribute::·uves_obs_redchain.param.uves_cal_mdark.khigh | ||
106 | ····Kappa·used·to·clip·high·level·values,·when·method·is·set·to·'mean'··(float;·default:·5.0)·[default=5.0]. | ||
107 | ..·py:attribute::·uves_obs_redchain.param.uves_cal_mdark.niter | ||
108 | ····Number·of·kappa·sigma·iterations,·when·method·is·set·to·'mean'··(int;··default:·5)·[default=5]. | ||
109 | ..·py:attribute::·uves_obs_redchain.param.uves_cal_mdark.stack_method | ||
110 | ····Method·used·to·build·master·frame··(str;·default:·'median')·[default="median"]. | ||
111 | ..·py:attribute::·uves_obs_redchain.param.uves_cal_mdark.klow | ||
112 | ····Kappa·used·to·clip·low·level·values,·when·method·is·set·to·'mean'··(float;·default:·5.0)·[default=5.0]. | ||
113 | ..·py:attribute::·uves_obs_redchain.param.uves_cal_mdark.khigh | ||
114 | ····Kappa·used·to·clip·high·level·values,·when·method·is·set·to·'mean'··(float;·default:·5.0)·[default=5.0]. | ||
115 | ..·py:attribute::·uves_obs_redchain.param.uves_cal_mdark.niter | ||
116 | ····Number·of·kappa·sigma·iterations,·when·method·is·set·to·'mean'··(int;··default:·5)·[default=5]. | ||
117 | ..·py:attribute::·uves_obs_redchain.param.uves_cal_mdark.qc_dark.reg.num_x | ||
118 | ····Number·of·regions·along·the·X·axis·(where·mean/med/rms·are·computed).··(int;·default:·4)·[default=4]. | ||
119 | ..·py:attribute::·uves_obs_redchain.param.uves_cal_mdark.qc_dark.reg.num_y | ||
120 | ····Number·of·regions·along·the·Y·axis(where·mean/med/rms·are·computed).··(int;·default:·4)·[default=4]. | ||
121 | ..·py:attribute::·uves_obs_redchain.param.uves_cal_mdark.qc_dark.reg.box_sx | ||
122 | ····Region·X·size·[pix]·(int;·default:·100)·[default=100]. | ||
123 | ..·py:attribute::·uves_obs_redchain.param.uves_cal_mdark.qc_dark.reg.box_sy | ||
124 | ····Region·Y·size·[pix]·(int;·default:·100)·[default=100]. | ||
125 | ..·py:attribute::·uves_obs_redchain.param.uves_cal_mdark.qc_dark.reg.border_x | ||
126 | ····X·distance·between·the·left·hand·side·of·the·detector·and·the·left··hand·side·of·the·region·[pix]·(int;·default:·100)·[default=100]. | ||
127 | ..·py:attribute::·uves_obs_redchain.param.uves_cal_mdark.qc_dark.reg.border_y | ||
128 | ····X·distance·between·the·left·hand·side·of·the·detector·and·the·left··hand·side·of·the·region·[pix]·(int;·default:·100)·[default=100]. | ||
129 | ..·py:attribute::·uves_obs_redchain.param.uves_cal_mdark.qc_dark.reg.when | ||
130 | ····When·QC·analysis·is·performed.·0:·on·each·raw·frame·or·1:·on·the··master·frame·(int;·default:·0)·[default=0]. | ||
131 | ..·py:attribute::·uves_obs_redchain.param.uves_obs_scired.clean_traps | 67 | ..·py:attribute::·uves_obs_redchain.param.uves_obs_scired.clean_traps |
132 | ····Clean·detector·traps.·If·TRUE·detector·traps·are·interpolated.The·bad··pixels·are·replaced·by·the·average·of·thenearest·good·pixels·in·the··same·column,·or·simply·marked·as·bad.·The·positions·of·bad·pixels·are··hard-coded·(as·function·of·UVES·chip).·(bool;·default:·False)·[default=False]. | 68 | ····Clean·detector·traps.·If·TRUE·detector·traps·are·interpolated.The·bad··pixels·are·replaced·by·the·average·of·thenearest·good·pixels·in·the··same·column,·or·simply·marked·as·bad.·The·positions·of·bad·pixels·are··hard-coded·(as·function·of·UVES·chip).·(bool;·default:·False)·[default=False]. |
133 | ..·py:attribute::·uves_obs_redchain.param.uves_obs_scired.reduce.slitlength | 69 | ..·py:attribute::·uves_obs_redchain.param.uves_obs_scired.reduce.slitlength |
134 | ····Extraction·slit·length·(in·pixels).·If·negative,·the·value·inferred··from·the·raw·frame·header·is·used·(float;·default:·-1.0)·[default=-1.0]. | 70 | ····Extraction·slit·length·(in·pixels).·If·negative,·the·value·inferred··from·the·raw·frame·header·is·used·(float;·default:·-1.0)·[default=-1.0]. |
135 | ..·py:attribute::·uves_obs_redchain.param.uves_obs_scired.reduce.skysub | 71 | ..·py:attribute::·uves_obs_redchain.param.uves_obs_scired.reduce.skysub |
Offset 188, 41 lines modified | Offset 92, 14 lines modified | ||
188 | ····Order·merging·method.·If·'optimal',·the·flux·in·the·overlapping·region··is·set·to·the·(optimally·computed,·using·the·uncertainties)·average·of··single·order·spectra.·If·'sum',·the·flux·in·the·overlapping·region·is··computed·as·the·sum·of·the·single·order·spectra.·If·'noappend'·the··spectrum·is·simply·rebinned·but·not·merged.If·flat-fielding·is·done,··method·'optimal'·is·recommended,·otherwise·'sum'.·(str;·default:··'optimal')·[default="optimal"]. | 92 | ····Order·merging·method.·If·'optimal',·the·flux·in·the·overlapping·region··is·set·to·the·(optimally·computed,·using·the·uncertainties)·average·of··single·order·spectra.·If·'sum',·the·flux·in·the·overlapping·region·is··computed·as·the·sum·of·the·single·order·spectra.·If·'noappend'·the··spectrum·is·simply·rebinned·but·not·merged.If·flat-fielding·is·done,··method·'optimal'·is·recommended,·otherwise·'sum'.·(str;·default:··'optimal')·[default="optimal"]. |
189 | ..·py:attribute::·uves_obs_redchain.param.uves_obs_scired.reduce.merge_delt1 | 93 | ..·py:attribute::·uves_obs_redchain.param.uves_obs_scired.reduce.merge_delt1 |
190 | ····Order·merging·left·hand·(short·wavelength)·cut.·To·reduce·the·amount··of·order·overlapping·regions·we·allow·to·cut·short·and·long·wavelength··ranges.·This·may·reduce·the·ripple·possibly·introduced·by·the·order··merging.·Suggested·values·are:·10·(W<=390),·12·(390<W<=437,··520<W<=564),·14·(437<W<=520,·564<W)··(float;·default:·0.0)·[default=0.0]. | 94 | ····Order·merging·left·hand·(short·wavelength)·cut.·To·reduce·the·amount··of·order·overlapping·regions·we·allow·to·cut·short·and·long·wavelength··ranges.·This·may·reduce·the·ripple·possibly·introduced·by·the·order··merging.·Suggested·values·are:·10·(W<=390),·12·(390<W<=437,··520<W<=564),·14·(437<W<=520,·564<W)··(float;·default:·0.0)·[default=0.0]. |
191 | ..·py:attribute::·uves_obs_redchain.param.uves_obs_scired.reduce.merge_delt2 | 95 | ..·py:attribute::·uves_obs_redchain.param.uves_obs_scired.reduce.merge_delt2 |
192 | ····Order·merging·right·hand·(long·wavelength)·cut.·To·reduce·the·amount··of·order·overlapping·regions·we·allow·to·cut·short·and·long·wavelength··ranges.·This·may·reduce·the·ripple·possibly·introduced·by·the·order··merging.·Suggested·values·is·4·(float;·default:·0.0)·[default=0.0]. | 96 | ····Order·merging·right·hand·(long·wavelength)·cut.·To·reduce·the·amount··of·order·overlapping·regions·we·allow·to·cut·short·and·long·wavelength··ranges.·This·may·reduce·the·ripple·possibly·introduced·by·the·order··merging.·Suggested·values·is·4·(float;·default:·0.0)·[default=0.0]. |
193 | ..·py:attribute::·uves_obs_redchain.param.uves_obs_scired.reduce.rebin.wavestep | ||
194 | ····The·bin·size·(in·w.l.u.)·in·wavelength·space.·If·negative,·a·step·size··of·2/3·*·(·average·pixel·size·)·is·used.·(float;·default:·-1.0)·[default=-1.0]. | ||
195 | ..·py:attribute::·uves_obs_redchain.param.uves_obs_scired.reduce.rebin.scale | ||
196 | ····Whether·or·not·to·multiply·by·the·factor·dx/dlambda·(pixels·per··wavelength)·during·the·rebinning.·This·option·is·disabled·as·default··in·concordance·with·the·method·used·in·the·MIDAS·pipeline.·This·option··should·be·set·to·true·to·convert·the·observed·flux·(in·pixel-space)·to··a·flux·per·wavelength·(in·wavelength-space).·(bool;·default:·False)·[default=False]. | ||
197 | ..·py:attribute::·uves_obs_redchain.param.uves_obs_scired.reduce.extract.method | ||
198 | ····Extraction·method.·(2d/optimal·not·supported·by·uves_cal_wavecal,··weighted·supported·only·by·uves_cal_wavecal,·2d·not·supported·by··uves_cal_response)·(str;·default:·'optimal')·[default="optimal"]. | ||
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152 | <dl·class="attribute"> | 152 | <dl·class="attribute"> |
153 | <dt·id="flames_obs_redchain.param.process_chip"> | 153 | <dt·id="flames_obs_redchain.param.process_chip"> |
154 | <code·class="descclassname">flames_obs_redchain.param.</code><code·class="descname">process_chip</code><a·class="headerlink"·href="#flames_obs_redchain.param.process_chip"·title="Permalink·to·this·definition">¶</a></dt> | 154 | <code·class="descclassname">flames_obs_redchain.param.</code><code·class="descname">process_chip</code><a·class="headerlink"·href="#flames_obs_redchain.param.process_chip"·title="Permalink·to·this·definition">¶</a></dt> |
155 | <dd><p>For·RED·arm·data·process·the·redl,·redu,·or·both·chip(s)·(str;··default:·‘both’)·[default=”both”].</p> | 155 | <dd><p>For·RED·arm·data·process·the·redl,·redu,·or·both·chip(s)·(str;··default:·‘both’)·[default=”both”].</p> |
156 | </dd></dl> | 156 | </dd></dl> |
157 | <dl·class="attribute"> | 157 | <dl·class="attribute"> |
158 | <dt·id="flames_obs_redchain.param.flames_cal_orderpos.use_guess_tab"> | ||
159 | <code·class="descclassname">flames_obs_redchain.param.flames_cal_orderpos.</code><code·class="descname">use_guess_tab</code><a·class="headerlink"·href="#flames_obs_redchain.param.flames_cal_orderpos.use_guess_tab"·title="Permalink·to·this·definition">¶</a></dt> | ||
160 | <dd><p>If·a·Guess·order·table·is·provided·this·parameter·set·how·it·is··used:0:·No·usage,·1:·use·it·to·set·lower/upper·Y·raws·where·order·are··searched·2:·the·order·table·try·to·fully·match·the·guess·(int;··default:·1)·[default=1].</p> | ||
161 | </dd></dl> | ||
162 | <dl·class="attribute"> | ||
163 | <dt·id="flames_obs_redchain.param.flames_cal_orderpos.radx"> | ||
164 | <code·class="descclassname">flames_obs_redchain.param.flames_cal_orderpos.</code><code·class="descname">radx</code><a·class="headerlink"·href="#flames_obs_redchain.param.flames_cal_orderpos.radx"·title="Permalink·to·this·definition">¶</a></dt> | ||
165 | <dd><p>Half·X·size·of·median·filtering·window·(int;·default:·2)·[default=2].</p> | ||
166 | </dd></dl> | ||
167 | <dl·class="attribute"> | ||
168 | <dt·id="flames_obs_redchain.param.flames_cal_orderpos.rady"> | ||
169 | <code·class="descclassname">flames_obs_redchain.param.flames_cal_orderpos.</code><code·class="descname">rady</code><a·class="headerlink"·href="#flames_obs_redchain.param.flames_cal_orderpos.rady"·title="Permalink·to·this·definition">¶</a></dt> | ||
170 | <dd><p>Half·Y·size·of·median·filtering·window·(int;·default:·1)·[default=1].</p> | ||
171 | </dd></dl> | ||
172 | <dl·class="attribute"> | ||
173 | <dt·id="flames_obs_redchain.param.flames_cal_orderpos.mmethod"> | ||
174 | <code·class="descclassname">flames_obs_redchain.param.flames_cal_orderpos.</code><code·class="descname">mmethod</code><a·class="headerlink"·href="#flames_obs_redchain.param.flames_cal_orderpos.mmethod"·title="Permalink·to·this·definition">¶</a></dt> | ||
175 | <dd><p>Background·subtraction·method.·If·equal·to·‘median’·the·background·is··sampled·using·the·median·of·a·sub-window.·If·‘minimum’,·the·minimum··sub-window·value·is·used.·If·‘no’,·no·background·subtraction·is·done.··(str;·default:·‘median’)·[default=”median”].</p> | ||
176 | </dd></dl> | ||
177 | <dl·class="attribute"> | ||
178 | <dt·id="flames_obs_redchain.param.flames_cal_orderpos.backsubgrid"> | ||
179 | <code·class="descclassname">flames_obs_redchain.param.flames_cal_orderpos.</code><code·class="descname">backsubgrid</code><a·class="headerlink"·href="#flames_obs_redchain.param.flames_cal_orderpos.backsubgrid"·title="Permalink·to·this·definition">¶</a></dt> | ||
180 | <dd><p>Number·of·grid·points·(in·x-·and·y-direction)·used·to·estimate·the··background·(mode=poly).·(int;·default:·50)·[default=50].</p> | ||
181 | </dd></dl> | ||
182 | <dl·class="attribute"> | ||
183 | <dt·id="flames_obs_redchain.param.flames_cal_orderpos.backsubradiusy"> | ||
184 | <code·class="descclassname">flames_obs_redchain.param.flames_cal_orderpos.</code><code·class="descname">backsubradiusy</code><a·class="headerlink"·href="#flames_obs_redchain.param.flames_cal_orderpos.backsubradiusy"·title="Permalink·to·this·definition">¶</a></dt> | ||
185 | <dd><p>The·height·(in·pixels)·of·the·background·sampling·window·is·(2*radiusy··+·1).·This·parameter·is·not·corrected·for·binning.·(int;·default:·2)·[default=2].</p> | ||
186 | </dd></dl> | ||
187 | <dl·class="attribute"> | ||
188 | <dt·id="flames_obs_redchain.param.flames_cal_orderpos.backsubkappa"> | ||
189 | <code·class="descclassname">flames_obs_redchain.param.flames_cal_orderpos.</code><code·class="descname">backsubkappa</code><a·class="headerlink"·href="#flames_obs_redchain.param.flames_cal_orderpos.backsubkappa"·title="Permalink·to·this·definition">¶</a></dt> | ||
190 | <dd><p>The·value·of·kappa·in·the·one-sided·kappa-sigma·clipping·used·to··estimate·the·background·(mode=poly).·(float;·default:·4.0)·[default=4.0].</p> | ||
191 | </dd></dl> | ||
192 | <dl·class="attribute"> | ||
193 | <dt·id="flames_obs_redchain.param.flames_cal_orderpos.backsubdegx"> | ||
194 | <code·class="descclassname">flames_obs_redchain.param.flames_cal_orderpos.</code><code·class="descname">backsubdegx</code><a·class="headerlink"·href="#flames_obs_redchain.param.flames_cal_orderpos.backsubdegx"·title="Permalink·to·this·definition">¶</a></dt> | ||
195 | <dd><p>Degree·(in·x)·of·polynomial·used·to·estimate·the·background··(mode=poly).·(int;·default:·2)·[default=2].</p> | ||
196 | </dd></dl> | ||
197 | <dl·class="attribute"> | ||
198 | <dt·id="flames_obs_redchain.param.flames_cal_orderpos.backsubdegy"> | ||
199 | <code·class="descclassname">flames_obs_redchain.param.flames_cal_orderpos.</code><code·class="descname">backsubdegy</code><a·class="headerlink"·href="#flames_obs_redchain.param.flames_cal_orderpos.backsubdegy"·title="Permalink·to·this·definition">¶</a></dt> | ||
200 | <dd><p>Degree·(in·y)·of·polynomial·used·to·estimate·the·background··(mode=poly).·(int;·default:·2)·[default=2].</p> | ||
201 | </dd></dl> | ||
202 | <dl·class="attribute"> | ||
203 | <dt·id="flames_obs_redchain.param.flames_cal_orderpos.samplewidth"> | ||
204 | <code·class="descclassname">flames_obs_redchain.param.flames_cal_orderpos.</code><code·class="descname">samplewidth</code><a·class="headerlink"·href="#flames_obs_redchain.param.flames_cal_orderpos.samplewidth"·title="Permalink·to·this·definition">¶</a></dt> | ||
205 | <dd><p>Separation·of·sample·traces·(used·by·Hough·transform)·in·input·image··(int;·default:·50)·[default=50].</p> | ||
206 | </dd></dl> | ||
207 | <dl·class="attribute"> | ||
208 | <dt·id="flames_obs_redchain.param.flames_cal_orderpos.minslope"> | ||
209 | <code·class="descclassname">flames_obs_redchain.param.flames_cal_orderpos.</code><code·class="descname">minslope</code><a·class="headerlink"·href="#flames_obs_redchain.param.flames_cal_orderpos.minslope"·title="Permalink·to·this·definition">¶</a></dt> | ||
210 | <dd><p>Minimum·possible·line·slope.·This·should·be·the·‘physical’·slope·on··the·chip,·i.e.·not·taking·binning·factors·into·account,·which·is··handled·by·the·recipe·(float;·default:·0.0)·[default=0.0].</p> | ||
211 | </dd></dl> | ||
212 | <dl·class="attribute"> | ||
213 | <dt·id="flames_obs_redchain.param.flames_cal_orderpos.maxslope"> | ||
214 | <code·class="descclassname">flames_obs_redchain.param.flames_cal_orderpos.</code><code·class="descname">maxslope</code><a·class="headerlink"·href="#flames_obs_redchain.param.flames_cal_orderpos.maxslope"·title="Permalink·to·this·definition">¶</a></dt> | ||
215 | <dd><p>Maximum·possible·line·slope·(float;·default:·0.2)·[default=0.2].</p> | ||
216 | </dd></dl> | ||
217 | <dl·class="attribute"> | ||
218 | <dt·id="flames_obs_redchain.param.flames_cal_orderpos.sloperes"> | ||
219 | <code·class="descclassname">flames_obs_redchain.param.flames_cal_orderpos.</code><code·class="descname">sloperes</code><a·class="headerlink"·href="#flames_obs_redchain.param.flames_cal_orderpos.sloperes"·title="Permalink·to·this·definition">¶</a></dt> | ||
220 | <dd><p>Resolution·(width·in·pixels)·of·Hough·space·(int;·default:·120)·[default=120].</p> | ||
221 | </dd></dl> | ||
222 | <dl·class="attribute"> | ||
223 | <dt·id="flames_obs_redchain.param.flames_cal_orderpos.pthres"> | ||
224 | <code·class="descclassname">flames_obs_redchain.param.flames_cal_orderpos.</code><code·class="descname">pthres</code><a·class="headerlink"·href="#flames_obs_redchain.param.flames_cal_orderpos.pthres"·title="Permalink·to·this·definition">¶</a></dt> | ||
225 | <dd><p>In·automatic·mode,·or·if·the·number·of·orders·to·detect·is·read·from·a··guess·table,·the·detection·of·new·lines·stops·when·the·intensity·of·a··candidate·line·drops·to·less·than·‘pthres’·times·the·intensity·of·the··previous·detection.··(float;·default:·0.2)·[default=0.2].</p> | ||
226 | </dd></dl> | ||
227 | <dl·class="attribute"> | ||
228 | <dt·id="flames_obs_redchain.param.flames_cal_orderpos.tracestep"> | ||
229 | <code·class="descclassname">flames_obs_redchain.param.flames_cal_orderpos.</code><code·class="descname">tracestep</code><a·class="headerlink"·href="#flames_obs_redchain.param.flames_cal_orderpos.tracestep"·title="Permalink·to·this·definition">¶</a></dt> | ||
230 | <dd><p>The·step·size·used·when·tracing·the·orders·(int;·default:·10)·[default=10].</p> | ||
231 | </dd></dl> | ||
232 | <dl·class="attribute"> | ||
233 | <dt·id="flames_obs_redchain.param.flames_cal_orderpos.minthresh"> | ||
234 | <code·class="descclassname">flames_obs_redchain.param.flames_cal_orderpos.</code><code·class="descname">minthresh</code><a·class="headerlink"·href="#flames_obs_redchain.param.flames_cal_orderpos.minthresh"·title="Permalink·to·this·definition">¶</a></dt> | ||
235 | <dd><p>The·minimum·threshold·value·is·(min·+·minthres*(max·-·min)).·Here··‘min’·and·‘max’·are·the·lowest·and·highest·pixel·values·in·the·central··bin·of·the·order·(float;·default:·0.2)·[default=0.2].</p> | ||
236 | </dd></dl> | ||
237 | <dl·class="attribute"> | ||
238 | <dt·id="flames_obs_redchain.param.flames_cal_orderpos.maxgap"> | ||
239 | <code·class="descclassname">flames_obs_redchain.param.flames_cal_orderpos.</code><code·class="descname">maxgap</code><a·class="headerlink"·href="#flames_obs_redchain.param.flames_cal_orderpos.maxgap"·title="Permalink·to·this·definition">¶</a></dt> | ||
240 | <dd><p>If·the·order·line·drops·below·detection·threshold,·the·order·tracing··algorithm·will·try·to·jump·a·gap·of·maximum·size·‘maxgap’·multiplied··by·the·image·width·(float;·default:·0.2)·[default=0.2].</p> | ||
241 | </dd></dl> | ||
242 | <dl·class="attribute"> | ||
243 | <dt·id="flames_obs_redchain.param.flames_cal_orderpos.maxrms"> | ||
244 | <code·class="descclassname">flames_obs_redchain.param.flames_cal_orderpos.</code><code·class="descname">maxrms</code><a·class="headerlink"·href="#flames_obs_redchain.param.flames_cal_orderpos.maxrms"·title="Permalink·to·this·definition">¶</a></dt> | ||
245 | <dd><p>When·fitting·the·orders·with·straight·lines,·this·is·the·maximum··allowed·RMS·relative·to·the·median·RMS·of·all·orders·(float;·default:··100.0)·[default=100.0].</p> | ||
246 | </dd></dl> | ||
247 | <dl·class="attribute"> | ||
248 | <dt·id="flames_obs_redchain.param.flames_cal_orderpos.defpol1"> | ||
249 | <code·class="descclassname">flames_obs_redchain.param.flames_cal_orderpos.</code><code·class="descname">defpol1</code><a·class="headerlink"·href="#flames_obs_redchain.param.flames_cal_orderpos.defpol1"·title="Permalink·to·this·definition">¶</a></dt> | ||
250 | <dd><p>The·degree·of·the·bivarite·fit·(cross·dispersion·direction).·If··negative,·the·degree·is·optimized·to·give·the·best·fit·(int;·default:··-1)·[default=-1].</p> | ||
251 | </dd></dl> | ||
252 | <dl·class="attribute"> | ||
253 | <dt·id="flames_obs_redchain.param.flames_cal_orderpos.defpol2"> | ||
254 | <code·class="descclassname">flames_obs_redchain.param.flames_cal_orderpos.</code><code·class="descname">defpol2</code><a·class="headerlink"·href="#flames_obs_redchain.param.flames_cal_orderpos.defpol2"·title="Permalink·to·this·definition">¶</a></dt> | ||
255 | <dd><p>The·degree·of·the·bivarite·fit·(order·number).·If·negative,·the·degree··is·optimized·to·give·the·best·fit·(int;·default:·-1)·[default=-1].</p> | ||
256 | </dd></dl> | ||
257 | <dl·class="attribute"> | ||
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207 | <dl·class="attribute"> | 207 | <dl·class="attribute"> |
208 | <dt·id="uves_cal_mkmaster.param.norm_method"> | 208 | <dt·id="uves_cal_mkmaster.param.norm_method"> |
209 | <code·class="descclassname">uves_cal_mkmaster.param.</code><code·class="descname">norm_method</code><a·class="headerlink"·href="#uves_cal_mkmaster.param.norm_method"·title="Permalink·to·this·definition">¶</a></dt> | 209 | <code·class="descclassname">uves_cal_mkmaster.param.</code><code·class="descname">norm_method</code><a·class="headerlink"·href="#uves_cal_mkmaster.param.norm_method"·title="Permalink·to·this·definition">¶</a></dt> |
210 | <dd><p>Method·used·to·build·master·frame··(str;·default:·‘explevel’)·[default=”explevel”].</p> | 210 | <dd><p>Method·used·to·build·master·frame··(str;·default:·‘explevel’)·[default=”explevel”].</p> |
211 | </dd></dl> | 211 | </dd></dl> |
212 | <dl·class="attribute"> | 212 | <dl·class="attribute"> |
213 | <dt·id="uves_cal_mkmaster.param.backsub.mmethod"> | ||
214 | <code·class="descclassname">uves_cal_mkmaster.param.backsub.</code><code·class="descname">mmethod</code><a·class="headerlink"·href="#uves_cal_mkmaster.param.backsub.mmethod"·title="Permalink·to·this·definition">¶</a></dt> | ||
215 | <dd><p>Background·measuring·method.·If·equal·to·‘median’·the·background·is··sampled·using·the·median·of·a·subwindow.·If·‘minimum’,·the·subwindow··minimum·value·is·used.·If·‘no’,·no·background·subtraction·is·done.··(str;·default:·‘median’)·[default=”median”].</p> | ||
216 | </dd></dl> | ||
217 | <dl·class="attribute"> | ||
218 | <dt·id="uves_cal_mkmaster.param.backsub.npoints"> | ||
219 | <code·class="descclassname">uves_cal_mkmaster.param.backsub.</code><code·class="descname">npoints</code><a·class="headerlink"·href="#uves_cal_mkmaster.param.backsub.npoints"·title="Permalink·to·this·definition">¶</a></dt> | ||
220 | <dd><p>This·is·the·number·of·columns·in·interorder·space·used·to·sample·the··background.·(int;·default:·82)·[default=82].</p> | ||
221 | </dd></dl> | ||
222 | <dl·class="attribute"> | ||
223 | <dt·id="uves_cal_mkmaster.param.backsub.radiusy"> | ||
224 | <code·class="descclassname">uves_cal_mkmaster.param.backsub.</code><code·class="descname">radiusy</code><a·class="headerlink"·href="#uves_cal_mkmaster.param.backsub.radiusy"·title="Permalink·to·this·definition">¶</a></dt> | ||
225 | <dd><p>The·height·(in·pixels)·of·the·background·sampling·window·is·(2*radiusy··+·1).·This·parameter·is·not·corrected·for·binning.·(int;·default:·2)·[default=2].</p> | ||
226 | </dd></dl> | ||
227 | <dl·class="attribute"> | ||
228 | <dt·id="uves_cal_mkmaster.param.backsub.sdegree"> | ||
229 | <code·class="descclassname">uves_cal_mkmaster.param.backsub.</code><code·class="descname">sdegree</code><a·class="headerlink"·href="#uves_cal_mkmaster.param.backsub.sdegree"·title="Permalink·to·this·definition">¶</a></dt> | ||
230 | <dd><p>Degree·of·interpolating·splines.·Currently·only·degree·=·1·is··supported·(int;·default:·1)·[default=1].</p> | ||
231 | </dd></dl> | ||
232 | <dl·class="attribute"> | ||
233 | <dt·id="uves_cal_mkmaster.param.backsub.smoothx"> | ||
234 | <code·class="descclassname">uves_cal_mkmaster.param.backsub.</code><code·class="descname">smoothx</code><a·class="headerlink"·href="#uves_cal_mkmaster.param.backsub.smoothx"·title="Permalink·to·this·definition">¶</a></dt> | ||
235 | <dd><p>If·spline·interpolation·is·used·to·measure·the·background,·the··x-radius·of·the·post-smoothing·window·is·(smoothx·*·image_width).··Here,·‘image_width’·is·the·image·width·after·binning.·If·negative,·the··default·values·are·used:·(25.0/4096)·for·blue·flat-field·frames,··(50.0/4096)·for·red·flat-field·frames,·(300.0/4096)·for·blue·science··frames·and·(300.0/4096)·for·red·science·frames.·(float;·default:·-1.0)·[default=-1.0].</p> | ||
236 | </dd></dl> | ||
237 | <dl·class="attribute"> | ||
238 | <dt·id="uves_cal_mkmaster.param.backsub.smoothy"> | ||
239 | <code·class="descclassname">uves_cal_mkmaster.param.backsub.</code><code·class="descname">smoothy</code><a·class="headerlink"·href="#uves_cal_mkmaster.param.backsub.smoothy"·title="Permalink·to·this·definition">¶</a></dt> | ||
240 | <dd><p>If·spline·interpolation·is·used·to·measure·the·background,·the··y-radius·of·the·post-smoothing·window·is·(smoothy·*·image_height).··Here,·‘image_height’·is·the·image·height·after·binning.·If·negative,··the·default·values·are·used:·(100.0/2048)·for·blue·flat-field·frames,··(300.0/2048)·for·red·flat-field·frames,·(200.0/2048)·for·blue·science··frames·and·(500.0/2048)·for·red·science·frames.·(float;·default:·-1.0)·[default=-1.0].</p> | ||
241 | </dd></dl> | ||
242 | <dl·class="attribute"> | ||
243 | <dt·id="uves_cal_mkmaster.param.qc_dark.reg.num_x"> | 213 | <dt·id="uves_cal_mkmaster.param.qc_dark.reg.num_x"> |
244 | <code·class="descclassname">uves_cal_mkmaster.param.qc_dark.reg.</code><code·class="descname">num_x</code><a·class="headerlink"·href="#uves_cal_mkmaster.param.qc_dark.reg.num_x"·title="Permalink·to·this·definition">¶</a></dt> | 214 | <code·class="descclassname">uves_cal_mkmaster.param.qc_dark.reg.</code><code·class="descname">num_x</code><a·class="headerlink"·href="#uves_cal_mkmaster.param.qc_dark.reg.num_x"·title="Permalink·to·this·definition">¶</a></dt> |
245 | <dd><p>Number·of·regions·along·the·X·axis·(where·mean/med/rms·are·computed).··(int;·default:·4)·[default=4].</p> | 215 | <dd><p>Number·of·regions·along·the·X·axis·(where·mean/med/rms·are·computed).··(int;·default:·4)·[default=4].</p> |
246 | </dd></dl> | 216 | </dd></dl> |
247 | <dl·class="attribute"> | 217 | <dl·class="attribute"> |
248 | <dt·id="uves_cal_mkmaster.param.qc_dark.reg.num_y"> | 218 | <dt·id="uves_cal_mkmaster.param.qc_dark.reg.num_y"> |
Offset 284, 14 lines modified | Offset 248, 50 lines modified | ||
284 | <dl·class="attribute"> | 248 | <dl·class="attribute"> |
285 | <dt·id="uves_cal_mkmaster.param.qc_dark.reg.when"> | 249 | <dt·id="uves_cal_mkmaster.param.qc_dark.reg.when"> |
286 | <code·class="descclassname">uves_cal_mkmaster.param.qc_dark.reg.</code><code·class="descname">when</code><a·class="headerlink"·href="#uves_cal_mkmaster.param.qc_dark.reg.when"·title="Permalink·to·this·definition">¶</a></dt> | 250 | <code·class="descclassname">uves_cal_mkmaster.param.qc_dark.reg.</code><code·class="descname">when</code><a·class="headerlink"·href="#uves_cal_mkmaster.param.qc_dark.reg.when"·title="Permalink·to·this·definition">¶</a></dt> |
287 | <dd><p>When·QC·analysis·is·performed.·0:·on·each·raw·frame·or·1:·on·the··master·frame·(int;·default:·0)·[default=0].</p> | 251 | <dd><p>When·QC·analysis·is·performed.·0:·on·each·raw·frame·or·1:·on·the··master·frame·(int;·default:·0)·[default=0].</p> |
288 | </dd></dl> | 252 | </dd></dl> |
253 | <dl·class="attribute"> | ||
254 | <dt·id="uves_cal_mkmaster.param.backsub.mmethod"> | ||
255 | <code·class="descclassname">uves_cal_mkmaster.param.backsub.</code><code·class="descname">mmethod</code><a·class="headerlink"·href="#uves_cal_mkmaster.param.backsub.mmethod"·title="Permalink·to·this·definition">¶</a></dt> | ||
256 | <dd><p>Background·measuring·method.·If·equal·to·‘median’·the·background·is··sampled·using·the·median·of·a·subwindow.·If·‘minimum’,·the·subwindow··minimum·value·is·used.·If·‘no’,·no·background·subtraction·is·done.··(str;·default:·‘median’)·[default=”median”].</p> | ||
257 | </dd></dl> | ||
258 | <dl·class="attribute"> | ||
259 | <dt·id="uves_cal_mkmaster.param.backsub.npoints"> | ||
260 | <code·class="descclassname">uves_cal_mkmaster.param.backsub.</code><code·class="descname">npoints</code><a·class="headerlink"·href="#uves_cal_mkmaster.param.backsub.npoints"·title="Permalink·to·this·definition">¶</a></dt> | ||
261 | <dd><p>This·is·the·number·of·columns·in·interorder·space·used·to·sample·the··background.·(int;·default:·82)·[default=82].</p> | ||
262 | </dd></dl> | ||
263 | <dl·class="attribute"> | ||
264 | <dt·id="uves_cal_mkmaster.param.backsub.radiusy"> | ||
265 | <code·class="descclassname">uves_cal_mkmaster.param.backsub.</code><code·class="descname">radiusy</code><a·class="headerlink"·href="#uves_cal_mkmaster.param.backsub.radiusy"·title="Permalink·to·this·definition">¶</a></dt> | ||
266 | <dd><p>The·height·(in·pixels)·of·the·background·sampling·window·is·(2*radiusy··+·1).·This·parameter·is·not·corrected·for·binning.·(int;·default:·2)·[default=2].</p> | ||
267 | </dd></dl> | ||
268 | <dl·class="attribute"> | ||
269 | <dt·id="uves_cal_mkmaster.param.backsub.sdegree"> | ||
270 | <code·class="descclassname">uves_cal_mkmaster.param.backsub.</code><code·class="descname">sdegree</code><a·class="headerlink"·href="#uves_cal_mkmaster.param.backsub.sdegree"·title="Permalink·to·this·definition">¶</a></dt> | ||
271 | <dd><p>Degree·of·interpolating·splines.·Currently·only·degree·=·1·is··supported·(int;·default:·1)·[default=1].</p> | ||
272 | </dd></dl> | ||
273 | <dl·class="attribute"> | ||
274 | <dt·id="uves_cal_mkmaster.param.backsub.smoothx"> | ||
275 | <code·class="descclassname">uves_cal_mkmaster.param.backsub.</code><code·class="descname">smoothx</code><a·class="headerlink"·href="#uves_cal_mkmaster.param.backsub.smoothx"·title="Permalink·to·this·definition">¶</a></dt> | ||
276 | <dd><p>If·spline·interpolation·is·used·to·measure·the·background,·the··x-radius·of·the·post-smoothing·window·is·(smoothx·*·image_width).··Here,·‘image_width’·is·the·image·width·after·binning.·If·negative,·the··default·values·are·used:·(25.0/4096)·for·blue·flat-field·frames,··(50.0/4096)·for·red·flat-field·frames,·(300.0/4096)·for·blue·science··frames·and·(300.0/4096)·for·red·science·frames.·(float;·default:·-1.0)·[default=-1.0].</p> | ||
277 | </dd></dl> | ||
278 | <dl·class="attribute"> | ||
279 | <dt·id="uves_cal_mkmaster.param.backsub.smoothy"> | ||
280 | <code·class="descclassname">uves_cal_mkmaster.param.backsub.</code><code·class="descname">smoothy</code><a·class="headerlink"·href="#uves_cal_mkmaster.param.backsub.smoothy"·title="Permalink·to·this·definition">¶</a></dt> | ||
281 | <dd><p>If·spline·interpolation·is·used·to·measure·the·background,·the··y-radius·of·the·post-smoothing·window·is·(smoothy·*·image_height).··Here,·‘image_height’·is·the·image·height·after·binning.·If·negative,··the·default·values·are·used:·(100.0/2048)·for·blue·flat-field·frames,··(300.0/2048)·for·red·flat-field·frames,·(200.0/2048)·for·blue·science··frames·and·(500.0/2048)·for·red·science·frames.·(float;·default:·-1.0)·[default=-1.0].</p> | ||
282 | </dd></dl> | ||
289 | <p>The·following·code·snippet·shows·the·default·settings·for·the·available | 283 | <p>The·following·code·snippet·shows·the·default·settings·for·the·available |
290 | parameters.</p> | 284 | parameters.</p> |
291 | <div·class="highlight-default·notranslate"><div·class="highlight"><pre><span></span><span·class="kn">import</span>·<span·class="nn">cpl</span> | 285 | <div·class="highlight-default·notranslate"><div·class="highlight"><pre><span></span><span·class="kn">import</span>·<span·class="nn">cpl</span> |
292 | <span·class="n">uves_cal_mkmaster</span>·<span·class="o">=</span>·<span·class="n">cpl</span><span·class="o">.</span><span·class="n">Recipe</span><span·class="p">(</span><span·class="s2">"uves_cal_mkmaster"</span><span·class="p">)</span> | 286 | <span·class="n">uves_cal_mkmaster</span>·<span·class="o">=</span>·<span·class="n">cpl</span><span·class="o">.</span><span·class="n">Recipe</span><span·class="p">(</span><span·class="s2">"uves_cal_mkmaster"</span><span·class="p">)</span> |
293 | <span·class="n">uves_cal_mkmaster</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">stack_method</span>·<span·class="o">=</span>·<span·class="s2">"median"</span> | 287 | <span·class="n">uves_cal_mkmaster</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">stack_method</span>·<span·class="o">=</span>·<span·class="s2">"median"</span> |
294 | <span·class="n">uves_cal_mkmaster</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">klow</span>·<span·class="o">=</span>·<span·class="mf">5.0</span> | 288 | <span·class="n">uves_cal_mkmaster</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">klow</span>·<span·class="o">=</span>·<span·class="mf">5.0</span> |
Offset 305, 27 lines modified | Offset 305, 27 lines modified | ||
305 | <span·class="n">uves_cal_mkmaster</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">khigh</span>·<span·class="o">=</span>·<span·class="mf">5.0</span> | 305 | <span·class="n">uves_cal_mkmaster</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">khigh</span>·<span·class="o">=</span>·<span·class="mf">5.0</span> |
306 | <span·class="n">uves_cal_mkmaster</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">niter</span>·<span·class="o">=</span>·<span·class="mi">5</span> | 306 | <span·class="n">uves_cal_mkmaster</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">niter</span>·<span·class="o">=</span>·<span·class="mi">5</span> |
307 | <span·class="n">uves_cal_mkmaster</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">debug</span>·<span·class="o">=</span>·<span·class="kc">False</span> | 307 | <span·class="n">uves_cal_mkmaster</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">debug</span>·<span·class="o">=</span>·<span·class="kc">False</span> |
308 | <span·class="n">uves_cal_mkmaster</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">plotter</span>·<span·class="o">=</span>·<span·class="s2">"no"</span> | 308 | <span·class="n">uves_cal_mkmaster</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">plotter</span>·<span·class="o">=</span>·<span·class="s2">"no"</span> |
309 | <span·class="n">uves_cal_mkmaster</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">process_chip</span>·<span·class="o">=</span>·<span·class="s2">"both"</span> | 309 | <span·class="n">uves_cal_mkmaster</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">process_chip</span>·<span·class="o">=</span>·<span·class="s2">"both"</span> |
310 | <span·class="n">uves_cal_mkmaster</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">clean_traps</span>·<span·class="o">=</span>·<span·class="kc">False</span> | 310 | <span·class="n">uves_cal_mkmaster</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">clean_traps</span>·<span·class="o">=</span>·<span·class="kc">False</span> |
311 | <span·class="n">uves_cal_mkmaster</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">norm_method</span>·<span·class="o">=</span>·<span·class="s2">"explevel"</span> | 311 | <span·class="n">uves_cal_mkmaster</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">norm_method</span>·<span·class="o">=</span>·<span·class="s2">"explevel"</span> |
312 | <span·class="n">uves_cal_mkmaster</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">backsub</span><span·class="o">.</span><span·class="n">mmethod</span>·<span·class="o">=</span>·<span·class="s2">"median"</span> | ||
313 | <span·class="n">uves_cal_mkmaster</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">backsub</span><span·class="o">.</span><span·class="n">npoints</span>·<span·class="o">=</span>·<span·class="mi">82</span> | ||
314 | <span·class="n">uves_cal_mkmaster</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">backsub</span><span·class="o">.</span><span·class="n">radiusy</span>·<span·class="o">=</span>·<span·class="mi">2</span> | ||
315 | <span·class="n">uves_cal_mkmaster</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">backsub</span><span·class="o">.</span><span·class="n">sdegree</span>·<span·class="o">=</span>·<span·class="mi">1</span> | ||
316 | <span·class="n">uves_cal_mkmaster</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">backsub</span><span·class="o">.</span><span·class="n">smoothx</span>·<span·class="o">=</span>·<span·class="o">-</span><span·class="mf">1.0</span> | ||
317 | <span·class="n">uves_cal_mkmaster</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">backsub</span><span·class="o">.</span><span·class="n">smoothy</span>·<span·class="o">=</span>·<span·class="o">-</span><span·class="mf">1.0</span> | ||
318 | <span·class="n">uves_cal_mkmaster</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">qc_dark</span><span·class="o">.</span><span·class="n">reg</span><span·class="o">.</span><span·class="n">num_x</span>·<span·class="o">=</span>·<span·class="mi">4</span> | 312 | <span·class="n">uves_cal_mkmaster</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">qc_dark</span><span·class="o">.</span><span·class="n">reg</span><span·class="o">.</span><span·class="n">num_x</span>·<span·class="o">=</span>·<span·class="mi">4</span> |
319 | <span·class="n">uves_cal_mkmaster</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">qc_dark</span><span·class="o">.</span><span·class="n">reg</span><span·class="o">.</span><span·class="n">num_y</span>·<span·class="o">=</span>·<span·class="mi">4</span> | 313 | <span·class="n">uves_cal_mkmaster</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">qc_dark</span><span·class="o">.</span><span·class="n">reg</span><span·class="o">.</span><span·class="n">num_y</span>·<span·class="o">=</span>·<span·class="mi">4</span> |
320 | <span·class="n">uves_cal_mkmaster</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">qc_dark</span><span·class="o">.</span><span·class="n">reg</span><span·class="o">.</span><span·class="n">box_sx</span>·<span·class="o">=</span>·<span·class="mi">100</span> | 314 | <span·class="n">uves_cal_mkmaster</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">qc_dark</span><span·class="o">.</span><span·class="n">reg</span><span·class="o">.</span><span·class="n">box_sx</span>·<span·class="o">=</span>·<span·class="mi">100</span> |
321 | <span·class="n">uves_cal_mkmaster</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">qc_dark</span><span·class="o">.</span><span·class="n">reg</span><span·class="o">.</span><span·class="n">box_sy</span>·<span·class="o">=</span>·<span·class="mi">100</span> | 315 | <span·class="n">uves_cal_mkmaster</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">qc_dark</span><span·class="o">.</span><span·class="n">reg</span><span·class="o">.</span><span·class="n">box_sy</span>·<span·class="o">=</span>·<span·class="mi">100</span> |
322 | <span·class="n">uves_cal_mkmaster</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">qc_dark</span><span·class="o">.</span><span·class="n">reg</span><span·class="o">.</span><span·class="n">border_x</span>·<span·class="o">=</span>·<span·class="mi">100</span> | 316 | <span·class="n">uves_cal_mkmaster</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">qc_dark</span><span·class="o">.</span><span·class="n">reg</span><span·class="o">.</span><span·class="n">border_x</span>·<span·class="o">=</span>·<span·class="mi">100</span> |
323 | <span·class="n">uves_cal_mkmaster</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">qc_dark</span><span·class="o">.</span><span·class="n">reg</span><span·class="o">.</span><span·class="n">border_y</span>·<span·class="o">=</span>·<span·class="mi">100</span> | 317 | <span·class="n">uves_cal_mkmaster</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">qc_dark</span><span·class="o">.</span><span·class="n">reg</span><span·class="o">.</span><span·class="n">border_y</span>·<span·class="o">=</span>·<span·class="mi">100</span> |
324 | <span·class="n">uves_cal_mkmaster</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">qc_dark</span><span·class="o">.</span><span·class="n">reg</span><span·class="o">.</span><span·class="n">when</span>·<span·class="o">=</span>·<span·class="mi">0</span> | 318 | <span·class="n">uves_cal_mkmaster</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">qc_dark</span><span·class="o">.</span><span·class="n">reg</span><span·class="o">.</span><span·class="n">when</span>·<span·class="o">=</span>·<span·class="mi">0</span> |
319 | <span·class="n">uves_cal_mkmaster</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">backsub</span><span·class="o">.</span><span·class="n">mmethod</span>·<span·class="o">=</span>·<span·class="s2">"median"</span> | ||
320 | <span·class="n">uves_cal_mkmaster</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">backsub</span><span·class="o">.</span><span·class="n">npoints</span>·<span·class="o">=</span>·<span·class="mi">82</span> | ||
321 | <span·class="n">uves_cal_mkmaster</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">backsub</span><span·class="o">.</span><span·class="n">radiusy</span>·<span·class="o">=</span>·<span·class="mi">2</span> | ||
322 | <span·class="n">uves_cal_mkmaster</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">backsub</span><span·class="o">.</span><span·class="n">sdegree</span>·<span·class="o">=</span>·<span·class="mi">1</span> | ||
323 | <span·class="n">uves_cal_mkmaster</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">backsub</span><span·class="o">.</span><span·class="n">smoothx</span>·<span·class="o">=</span>·<span·class="o">-</span><span·class="mf">1.0</span> | ||
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152 | <dl·class="attribute"> | 152 | <dl·class="attribute"> |
153 | <dt·id="uves_obs_redchain.param.process_chip"> | 153 | <dt·id="uves_obs_redchain.param.process_chip"> |
154 | <code·class="descclassname">uves_obs_redchain.param.</code><code·class="descname">process_chip</code><a·class="headerlink"·href="#uves_obs_redchain.param.process_chip"·title="Permalink·to·this·definition">¶</a></dt> | 154 | <code·class="descclassname">uves_obs_redchain.param.</code><code·class="descname">process_chip</code><a·class="headerlink"·href="#uves_obs_redchain.param.process_chip"·title="Permalink·to·this·definition">¶</a></dt> |
155 | <dd><p>For·RED·arm·data·process·the·redl,·redu,·or·both·chip(s)·(str;··default:·‘both’)·[default=”both”].</p> | 155 | <dd><p>For·RED·arm·data·process·the·redl,·redu,·or·both·chip(s)·(str;··default:·‘both’)·[default=”both”].</p> |
156 | </dd></dl> | 156 | </dd></dl> |
157 | <dl·class="attribute"> | 157 | <dl·class="attribute"> |
158 | <dt·id="uves_obs_redchain.param.uves_cal_predict.mbox_x"> | ||
159 | <code·class="descclassname">uves_obs_redchain.param.uves_cal_predict.</code><code·class="descname">mbox_x</code><a·class="headerlink"·href="#uves_obs_redchain.param.uves_cal_predict.mbox_x"·title="Permalink·to·this·definition">¶</a></dt> | ||
160 | <dd><p>Match·box·X·size·(int;·default:·40)·[default=40].</p> | ||
161 | </dd></dl> | ||
162 | <dl·class="attribute"> | ||
163 | <dt·id="uves_obs_redchain.param.uves_cal_predict.mbox_y"> | ||
164 | <code·class="descclassname">uves_obs_redchain.param.uves_cal_predict.</code><code·class="descname">mbox_y</code><a·class="headerlink"·href="#uves_obs_redchain.param.uves_cal_predict.mbox_y"·title="Permalink·to·this·definition">¶</a></dt> | ||
165 | <dd><p>Match·box·Y·size·(int;·default:·40)·[default=40].</p> | ||
166 | </dd></dl> | ||
167 | <dl·class="attribute"> | ||
168 | <dt·id="uves_obs_redchain.param.uves_cal_predict.trans_x"> | ||
169 | <code·class="descclassname">uves_obs_redchain.param.uves_cal_predict.</code><code·class="descname">trans_x</code><a·class="headerlink"·href="#uves_obs_redchain.param.uves_cal_predict.trans_x"·title="Permalink·to·this·definition">¶</a></dt> | ||
170 | <dd><p>Detector·translation·along·X·(float;·default:·0.0)·[default=0.0].</p> | ||
171 | </dd></dl> | ||
172 | <dl·class="attribute"> | ||
173 | <dt·id="uves_obs_redchain.param.uves_cal_predict.trans_y"> | ||
174 | <code·class="descclassname">uves_obs_redchain.param.uves_cal_predict.</code><code·class="descname">trans_y</code><a·class="headerlink"·href="#uves_obs_redchain.param.uves_cal_predict.trans_y"·title="Permalink·to·this·definition">¶</a></dt> | ||
175 | <dd><p>Detector·translation·along·Y·(float;·default:·0.0)·[default=0.0].</p> | ||
176 | </dd></dl> | ||
177 | <dl·class="attribute"> | ||
178 | <dt·id="uves_obs_redchain.param.uves_cal_predict.ech_angle_off"> | ||
179 | <code·class="descclassname">uves_obs_redchain.param.uves_cal_predict.</code><code·class="descname">ech_angle_off</code><a·class="headerlink"·href="#uves_obs_redchain.param.uves_cal_predict.ech_angle_off"·title="Permalink·to·this·definition">¶</a></dt> | ||
180 | <dd><p>Offset·on·echelle·angle·(float;·default:·0.0)·[default=0.0].</p> | ||
181 | </dd></dl> | ||
182 | <dl·class="attribute"> | ||
183 | <dt·id="uves_obs_redchain.param.uves_cal_predict.cd_angle_off"> | ||
184 | <code·class="descclassname">uves_obs_redchain.param.uves_cal_predict.</code><code·class="descname">cd_angle_off</code><a·class="headerlink"·href="#uves_obs_redchain.param.uves_cal_predict.cd_angle_off"·title="Permalink·to·this·definition">¶</a></dt> | ||
185 | <dd><p>Offset·on·cross·disperser·angle·(float;·default:·0.0)·[default=0.0].</p> | ||
186 | </dd></dl> | ||
187 | <dl·class="attribute"> | ||
188 | <dt·id="uves_obs_redchain.param.uves_cal_predict.ccd_rot_angle_off"> | ||
189 | <code·class="descclassname">uves_obs_redchain.param.uves_cal_predict.</code><code·class="descname">ccd_rot_angle_off</code><a·class="headerlink"·href="#uves_obs_redchain.param.uves_cal_predict.ccd_rot_angle_off"·title="Permalink·to·this·definition">¶</a></dt> | ||
190 | <dd><p>Offset·on·CCD·rotation·angle·(float;·default:·0.0)·[default=0.0].</p> | ||
191 | </dd></dl> | ||
192 | <dl·class="attribute"> | ||
193 | <dt·id="uves_obs_redchain.param.uves_cal_predict.compute_regression_sw"> | ||
194 | <code·class="descclassname">uves_obs_redchain.param.uves_cal_predict.</code><code·class="descname">compute_regression_sw</code><a·class="headerlink"·href="#uves_obs_redchain.param.uves_cal_predict.compute_regression_sw"·title="Permalink·to·this·definition">¶</a></dt> | ||
195 | <dd><p>Compute·regression?·(bool;·default:·True)·[default=True].</p> | ||
196 | </dd></dl> | ||
197 | <dl·class="attribute"> | ||
198 | <dt·id="uves_obs_redchain.param.uves_cal_predict.def_pol1"> | ||
199 | <code·class="descclassname">uves_obs_redchain.param.uves_cal_predict.</code><code·class="descname">def_pol1</code><a·class="headerlink"·href="#uves_obs_redchain.param.uves_cal_predict.def_pol1"·title="Permalink·to·this·definition">¶</a></dt> | ||
200 | <dd><p>Polynomial·X·deg·(int;·default:·4)·[default=4].</p> | ||
201 | </dd></dl> | ||
202 | <dl·class="attribute"> | ||
203 | <dt·id="uves_obs_redchain.param.uves_cal_predict.def_pol2"> | ||
204 | <code·class="descclassname">uves_obs_redchain.param.uves_cal_predict.</code><code·class="descname">def_pol2</code><a·class="headerlink"·href="#uves_obs_redchain.param.uves_cal_predict.def_pol2"·title="Permalink·to·this·definition">¶</a></dt> | ||
205 | <dd><p>Polynomial·Y·deg·(int;·default:·5)·[default=5].</p> | ||
206 | </dd></dl> | ||
207 | <dl·class="attribute"> | ||
208 | <dt·id="uves_obs_redchain.param.uves_cal_predict.kappa"> | ||
209 | <code·class="descclassname">uves_obs_redchain.param.uves_cal_predict.</code><code·class="descname">kappa</code><a·class="headerlink"·href="#uves_obs_redchain.param.uves_cal_predict.kappa"·title="Permalink·to·this·definition">¶</a></dt> | ||
210 | <dd><p>Kappa·value·in·kappa·sigma·clipping·on·RESIDUAL·between·YFIT·and·Y··columns·(float;·default:·4.5)·[default=4.5].</p> | ||
211 | </dd></dl> | ||
212 | <dl·class="attribute"> | ||
213 | <dt·id="uves_obs_redchain.param.uves_cal_predict.tol"> | ||
214 | <code·class="descclassname">uves_obs_redchain.param.uves_cal_predict.</code><code·class="descname">tol</code><a·class="headerlink"·href="#uves_obs_redchain.param.uves_cal_predict.tol"·title="Permalink·to·this·definition">¶</a></dt> | ||
215 | <dd><p>Tolerance·in·kappa·sigma·clipping·on·RESIDUAL·between·YFIT·and·Y··columns·(float;·default:·2.0)·[default=2.0].</p> | ||
216 | </dd></dl> | ||
217 | <dl·class="attribute"> | ||
218 | <dt·id="uves_obs_redchain.param.uves_cal_mbias.clean_traps"> | ||
219 | <code·class="descclassname">uves_obs_redchain.param.uves_cal_mbias.</code><code·class="descname">clean_traps</code><a·class="headerlink"·href="#uves_obs_redchain.param.uves_cal_mbias.clean_traps"·title="Permalink·to·this·definition">¶</a></dt> | ||
220 | <dd><p>Clean·detector·traps.·If·TRUE·detector·traps·are·interpolated.The·bad··pixels·are·replaced·by·the·average·of·thenearest·good·pixels·in·the··same·column,·or·simply·marked·as·bad.·The·positions·of·bad·pixels·are··hard-coded·(as·function·of·UVES·chip).·(bool;·default:·False)·[default=False].</p> | ||
221 | </dd></dl> | ||
222 | <dl·class="attribute"> | ||
223 | <dt·id="uves_obs_redchain.param.uves_cal_mbias.stack_method"> | ||
224 | <code·class="descclassname">uves_obs_redchain.param.uves_cal_mbias.</code><code·class="descname">stack_method</code><a·class="headerlink"·href="#uves_obs_redchain.param.uves_cal_mbias.stack_method"·title="Permalink·to·this·definition">¶</a></dt> | ||
225 | <dd><p>Method·used·to·build·master·frame··(str;·default:·‘median’)·[default=”median”].</p> | ||
226 | </dd></dl> | ||
227 | <dl·class="attribute"> | ||
228 | <dt·id="uves_obs_redchain.param.uves_cal_mbias.klow"> | ||
229 | <code·class="descclassname">uves_obs_redchain.param.uves_cal_mbias.</code><code·class="descname">klow</code><a·class="headerlink"·href="#uves_obs_redchain.param.uves_cal_mbias.klow"·title="Permalink·to·this·definition">¶</a></dt> | ||
230 | <dd><p>Kappa·used·to·clip·low·level·values,·when·method·is·set·to·‘mean’··(float;·default:·5.0)·[default=5.0].</p> | ||
231 | </dd></dl> | ||
232 | <dl·class="attribute"> | ||
233 | <dt·id="uves_obs_redchain.param.uves_cal_mbias.khigh"> | ||
234 | <code·class="descclassname">uves_obs_redchain.param.uves_cal_mbias.</code><code·class="descname">khigh</code><a·class="headerlink"·href="#uves_obs_redchain.param.uves_cal_mbias.khigh"·title="Permalink·to·this·definition">¶</a></dt> | ||
235 | <dd><p>Kappa·used·to·clip·high·level·values,·when·method·is·set·to·‘mean’··(float;·default:·5.0)·[default=5.0].</p> | ||
236 | </dd></dl> | ||
237 | <dl·class="attribute"> | ||
238 | <dt·id="uves_obs_redchain.param.uves_cal_mbias.niter"> | ||
239 | <code·class="descclassname">uves_obs_redchain.param.uves_cal_mbias.</code><code·class="descname">niter</code><a·class="headerlink"·href="#uves_obs_redchain.param.uves_cal_mbias.niter"·title="Permalink·to·this·definition">¶</a></dt> | ||
240 | <dd><p>Number·of·kappa·sigma·iterations,·when·method·is·set·to·‘mean’··(int;··default:·5)·[default=5].</p> | ||
241 | </dd></dl> | ||
242 | <dl·class="attribute"> | ||
243 | <dt·id="uves_obs_redchain.param.uves_cal_mdark.stack_method"> | ||
244 | <code·class="descclassname">uves_obs_redchain.param.uves_cal_mdark.</code><code·class="descname">stack_method</code><a·class="headerlink"·href="#uves_obs_redchain.param.uves_cal_mdark.stack_method"·title="Permalink·to·this·definition">¶</a></dt> | ||
245 | <dd><p>Method·used·to·build·master·frame··(str;·default:·‘median’)·[default=”median”].</p> | ||
246 | </dd></dl> | ||
247 | <dl·class="attribute"> | ||
248 | <dt·id="uves_obs_redchain.param.uves_cal_mdark.klow"> | ||
249 | <code·class="descclassname">uves_obs_redchain.param.uves_cal_mdark.</code><code·class="descname">klow</code><a·class="headerlink"·href="#uves_obs_redchain.param.uves_cal_mdark.klow"·title="Permalink·to·this·definition">¶</a></dt> | ||
250 | <dd><p>Kappa·used·to·clip·low·level·values,·when·method·is·set·to·‘mean’··(float;·default:·5.0)·[default=5.0].</p> | ||
251 | </dd></dl> | ||
252 | <dl·class="attribute"> | ||
253 | <dt·id="uves_obs_redchain.param.uves_cal_mdark.khigh"> | ||
254 | <code·class="descclassname">uves_obs_redchain.param.uves_cal_mdark.</code><code·class="descname">khigh</code><a·class="headerlink"·href="#uves_obs_redchain.param.uves_cal_mdark.khigh"·title="Permalink·to·this·definition">¶</a></dt> | ||
255 | <dd><p>Kappa·used·to·clip·high·level·values,·when·method·is·set·to·‘mean’··(float;·default:·5.0)·[default=5.0].</p> | ||
256 | </dd></dl> | ||
257 | <dl·class="attribute"> | ||
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185 | file·is·\fBflames_cal_wavecal.calibrate.tolerance\fR·[default·=·\fI0.6\fR]. | 185 | file·is·\fBflames_cal_wavecal.calibrate.tolerance\fR·[default·=·\fI0.6\fR]. |
186 | .TP | 186 | .TP |
187 | \fB\-\-kappa\fR·\fI<float>\fR | 187 | \fB\-\-kappa\fR·\fI<float>\fR |
188 | Lines·with·residuals·more·then·kappa·stdev·are·rejected·from·the·final | 188 | Lines·with·residuals·more·then·kappa·stdev·are·rejected·from·the·final |
189 | fit·(float;·default:·4.0).·The·full·name·of·this·option·for·the·EsoRex·configuration | 189 | fit·(float;·default:·4.0).·The·full·name·of·this·option·for·the·EsoRex·configuration |
190 | file·is·\fBflames_cal_wavecal.calibrate.kappa\fR·[default·=·\fI4.0\fR]. | 190 | file·is·\fBflames_cal_wavecal.calibrate.kappa\fR·[default·=·\fI4.0\fR]. |
191 | .TP | 191 | .TP |
192 | \fB\-\-rebin.wavestep\fR·\fI<float>\fR | ||
193 | The·bin·size·(in·w.l.u.)·in·wavelength·space.·If·negative,·a·step·size | ||
194 | of·2/3·*·(·average·pixel·size·)·is·used.·(float;·default:·\-1.0).·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
195 | file·is·\fBflames_cal_wavecal.rebin.wavestep\fR·[default·=·\fI\-1.0\fR]. | ||
196 | .TP | ||
197 | \fB\-\-rebin.scale\fR·\fI<bool>\fR | ||
198 | Whether·or·not·to·multiply·by·the·factor·dx/dlambda·(pixels·per | ||
199 | wavelength)·during·the·rebinning.·This·option·is·disabled·as·default | ||
200 | in·concordance·with·the·method·used·in·the·MIDAS·pipeline.·This·option | ||
201 | should·be·set·to·true·to·convert·the·observed·flux·(in·pixel\-space)·to | ||
202 | a·flux·per·wavelength·(in·wavelength\-space).·(bool;·default:·False).·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
203 | file·is·\fBflames_cal_wavecal.rebin.scale\fR·[default·=·\fIFalse\fR]. | ||
204 | .TP | ||
192 | \fB\-\-extract.method\fR·\fI<str>\fR | 205 | \fB\-\-extract.method\fR·\fI<str>\fR |
193 | Extraction·method.·(2d/optimal·not·supported·by·uves_cal_wavecal, | 206 | Extraction·method.·(2d/optimal·not·supported·by·uves_cal_wavecal, |
194 | weighted·supported·only·by·uves_cal_wavecal,·2d·not·supported·by | 207 | weighted·supported·only·by·uves_cal_wavecal,·2d·not·supported·by |
195 | uves_cal_response)·(str;·default:·\'average\').·The·full·name·of·this·option·for·the·EsoRex·configuration | 208 | uves_cal_response)·(str;·default:·\'average\').·The·full·name·of·this·option·for·the·EsoRex·configuration |
196 | file·is·\fBflames_cal_wavecal.extract.method\fR·[default·=·\fIaverage\fR]. | 209 | file·is·\fBflames_cal_wavecal.extract.method\fR·[default·=·\fIaverage\fR]. |
197 | .TP | 210 | .TP |
198 | \fB\-\-extract.kappa\fR·\fI<float>\fR | 211 | \fB\-\-extract.kappa\fR·\fI<float>\fR |
Offset 245, 27 lines modified | Offset 258, 14 lines modified | ||
245 | (optimal·extraction·only)·If·false·(fastest),·the·spectrum·is | 258 | (optimal·extraction·only)·If·false·(fastest),·the·spectrum·is |
246 | extracted·only·once.·If·true·(best),·the·spectrum·is·extracted·twice, | 259 | extracted·only·once.·If·true·(best),·the·spectrum·is·extracted·twice, |
247 | the·second·time·using·improved·variance·estimates·based·on·the·first | 260 | the·second·time·using·improved·variance·estimates·based·on·the·first |
248 | iteration.·Better·variance·estimates·slightly·improve·the·obtained | 261 | iteration.·Better·variance·estimates·slightly·improve·the·obtained |
249 | signal·to·noise·but·at·the·cost·of·increased·execution·time·(bool; | 262 | signal·to·noise·but·at·the·cost·of·increased·execution·time·(bool; |
250 | default:·True).·The·full·name·of·this·option·for·the·EsoRex·configuration | 263 | default:·True).·The·full·name·of·this·option·for·the·EsoRex·configuration |
251 | file·is·\fBflames_cal_wavecal.extract.best\fR·[default·=·\fITrue\fR]. | 264 | file·is·\fBflames_cal_wavecal.extract.best\fR·[default·=·\fITrue\fR]. |
252 | .TP | ||
253 | \fB\-\-rebin.wavestep\fR·\fI<float>\fR | ||
254 | The·bin·size·(in·w.l.u.)·in·wavelength·space.·If·negative,·a·step·size | ||
255 | of·2/3·*·(·average·pixel·size·)·is·used.·(float;·default:·\-1.0).·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
256 | file·is·\fBflames_cal_wavecal.rebin.wavestep\fR·[default·=·\fI\-1.0\fR]. | ||
257 | .TP | ||
258 | \fB\-\-rebin.scale\fR·\fI<bool>\fR | ||
259 | Whether·or·not·to·multiply·by·the·factor·dx/dlambda·(pixels·per | ||
260 | wavelength)·during·the·rebinning.·This·option·is·disabled·as·default | ||
261 | in·concordance·with·the·method·used·in·the·MIDAS·pipeline.·This·option | ||
262 | should·be·set·to·true·to·convert·the·observed·flux·(in·pixel\-space)·to | ||
263 | a·flux·per·wavelength·(in·wavelength\-space).·(bool;·default:·False).·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
264 | file·is·\fBflames_cal_wavecal.rebin.scale\fR·[default·=·\fIFalse\fR]. | ||
265 | .PP | 265 | .PP |
266 | Note·that·it·is·possible·to·create·a·configuration·file·containing·these | 266 | Note·that·it·is·possible·to·create·a·configuration·file·containing·these |
267 | options,·along·with·suitable·default·values.·Please·refer·to·the·details | 267 | options,·along·with·suitable·default·values.·Please·refer·to·the·details |
268 | provided·by·the·'esorex·\-\-help'·command. | 268 | provided·by·the·'esorex·\-\-help'·command. |
269 | .SH·SEE·ALSO | 269 | .SH·SEE·ALSO |
Offset 112, 14 lines modified | Offset 112, 56 lines modified | ||
112 | file·is·\fBflames_obs_redchain.flames_cal_predict.kappa\fR·[default·=·\fI4.5\fR]. | 112 | file·is·\fBflames_obs_redchain.flames_cal_predict.kappa\fR·[default·=·\fI4.5\fR]. |
113 | .TP | 113 | .TP |
114 | \fB\-\-flames_cal_predict.tol\fR·\fI<float>\fR | 114 | \fB\-\-flames_cal_predict.tol\fR·\fI<float>\fR |
115 | Tolerance·in·kappa·sigma·clipping·on·RESIDUAL·between·YFIT·and·Y | 115 | Tolerance·in·kappa·sigma·clipping·on·RESIDUAL·between·YFIT·and·Y |
116 | columns·(float;·default:·2.0).·The·full·name·of·this·option·for·the·EsoRex·configuration | 116 | columns·(float;·default:·2.0).·The·full·name·of·this·option·for·the·EsoRex·configuration |
117 | file·is·\fBflames_obs_redchain.flames_cal_predict.tol\fR·[default·=·\fI2.0\fR]. | 117 | file·is·\fBflames_obs_redchain.flames_cal_predict.tol\fR·[default·=·\fI2.0\fR]. |
118 | .TP | 118 | .TP |
119 | \fB\-\-flames_cal_prep_sff_ofpos.ext_method\fR·\fI<str>\fR | ||
120 | Extraction·method·(str;·default:·\'opt\').·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
121 | file·is·\fBflames_obs_redchain.flames_cal_prep_sff_ofpos.ext_method\fR·[default·=·\fIopt\fR]. | ||
122 | .TP | ||
123 | \fB\-\-flames_cal_prep_sff_ofpos.bias_method\fR·\fI<str>\fR | ||
124 | Bias·subtraction·method,·M·for·master·bias·frame,·N·for·no·bias | ||
125 | subtraction,·V·to·subtract·a·constant·bias·level·defined·by·the | ||
126 | parameter·bias_value·(str;·default:·\'M\').·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
127 | file·is·\fBflames_obs_redchain.flames_cal_prep_sff_ofpos.bias_method\fR·[default·=·\fIM\fR]. | ||
128 | .TP | ||
129 | \fB\-\-flames_cal_prep_sff_ofpos.bias_value\fR·\fI<int>\fR | ||
130 | Bias·value·(only·if·bias_method·=·V)·(int;·default:·200).·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
131 | file·is·\fBflames_obs_redchain.flames_cal_prep_sff_ofpos.bias_value\fR·[default·=·\fI200\fR]. | ||
132 | .TP | ||
133 | \fB\-\-flames_cal_prep_sff_ofpos.filter_switch\fR·\fI<str>\fR | ||
134 | Filter·switch·(str;·default:·\'none\').·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
135 | file·is·\fBflames_obs_redchain.flames_cal_prep_sff_ofpos.filter_switch\fR·[default·=·\fInone\fR]. | ||
136 | .TP | ||
137 | \fB\-\-flames_cal_prep_sff_ofpos.sat_thr\fR·\fI<int>\fR | ||
138 | Saturation·threshold·(int;·default:·55000).·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
139 | file·is·\fBflames_obs_redchain.flames_cal_prep_sff_ofpos.sat_thr\fR·[default·=·\fI55000\fR]. | ||
140 | .TP | ||
141 | \fB\-\-flames_cal_prep_sff_ofpos.fileprep\fR·\fI<bool>\fR | ||
142 | Slitff*·and·Fibreff*·file·preparation.·If·fast·extraction·method·is | ||
143 | used·it·should·be·set·to·FALSE·(bool;·default:·True).·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
144 | file·is·\fBflames_obs_redchain.flames_cal_prep_sff_ofpos.fileprep\fR·[default·=·\fITrue\fR]. | ||
145 | .TP | ||
146 | \fB\-\-flames_cal_prep_sff_ofpos.cubify\fR·\fI<bool>\fR | ||
147 | Cubify·switch·(bool;·default:·True).·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
148 | file·is·\fBflames_obs_redchain.flames_cal_prep_sff_ofpos.cubify\fR·[default·=·\fITrue\fR]. | ||
149 | .TP | ||
150 | \fB\-\-flames_cal_prep_sff_ofpos.save_flat_size\fR·\fI<int>\fR | ||
151 | To·be·sure·to·use·the·flat·part·of·a·slit·flatsone·may·need·to | ||
152 | subtract·this·bit.·The·default·value·\-1,·is·used·for·automatic | ||
153 | setting:·if·WCEN=520·save_flat_size=0,·else·save_flat_size=2.·Values | ||
154 | explicitly·set·by·user·overwrite·this·rule.·(int;·default:·\-1).·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
155 | file·is·\fBflames_obs_redchain.flames_cal_prep_sff_ofpos.save_flat_size\fR·[default·=·\fI\-1\fR]. | ||
156 | .TP | ||
157 | \fB\-\-flames_cal_prep_sff_ofpos.clean_tmp_products\fR·\fI<bool>\fR | ||
158 | Input·data·format·(bool;·default:·False).·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
159 | file·is·\fBflames_obs_redchain.flames_cal_prep_sff_ofpos.clean_tmp_products\fR·[default·=·\fIFalse\fR]. | ||
160 | .TP | ||
119 | \fB\-\-uves_cal_mflat.norm_method\fR·\fI<str>\fR | 161 | \fB\-\-uves_cal_mflat.norm_method\fR·\fI<str>\fR |
120 | Method·used·to·build·master·frame··(str;·default:·\'explevel\').·The·full·name·of·this·option·for·the·EsoRex·configuration | 162 | Method·used·to·build·master·frame··(str;·default:·\'explevel\').·The·full·name·of·this·option·for·the·EsoRex·configuration |
121 | file·is·\fBflames_obs_redchain.uves_cal_mflat.norm_method\fR·[default·=·\fIexplevel\fR]. | 163 | file·is·\fBflames_obs_redchain.uves_cal_mflat.norm_method\fR·[default·=·\fIexplevel\fR]. |
122 | .TP | 164 | .TP |
123 | \fB\-\-uves_cal_mflat.backsub.mmethod\fR·\fI<str>\fR | 165 | \fB\-\-uves_cal_mflat.backsub.mmethod\fR·\fI<str>\fR |
124 | Background·measuring·method.·If·equal·to·\'median\'·the·background·is | 166 | Background·measuring·method.·If·equal·to·\'median\'·the·background·is |
125 | sampled·using·the·median·of·a·subwindow.·If·\'minimum\',·the·subwindow | 167 | sampled·using·the·median·of·a·subwindow.·If·\'minimum\',·the·subwindow |
Offset 156, 14 lines modified | Offset 198, 85 lines modified | ||
156 | y\-radius·of·the·post\-smoothing·window·is·(smoothy·*·image_height). | 198 | y\-radius·of·the·post\-smoothing·window·is·(smoothy·*·image_height). |
157 | Here,·\'image_height\'·is·the·image·height·after·binning.·If·negative, | 199 | Here,·\'image_height\'·is·the·image·height·after·binning.·If·negative, |
158 | the·default·values·are·used:·(100.0/2048)·for·blue·flat\-field·frames, | 200 | the·default·values·are·used:·(100.0/2048)·for·blue·flat\-field·frames, |
159 | (300.0/2048)·for·red·flat\-field·frames,·(200.0/2048)·for·blue·science | 201 | (300.0/2048)·for·red·flat\-field·frames,·(200.0/2048)·for·blue·science |
160 | frames·and·(500.0/2048)·for·red·science·frames.·(float;·default:·\-1.0).·The·full·name·of·this·option·for·the·EsoRex·configuration | 202 | frames·and·(500.0/2048)·for·red·science·frames.·(float;·default:·\-1.0).·The·full·name·of·this·option·for·the·EsoRex·configuration |
161 | file·is·\fBflames_obs_redchain.uves_cal_mflat.backsub.smoothy\fR·[default·=·\fI\-1.0\fR]. | 203 | file·is·\fBflames_obs_redchain.uves_cal_mflat.backsub.smoothy\fR·[default·=·\fI\-1.0\fR]. |
162 | .TP | 204 | .TP |
205 | \fB\-\-uves_cal_mdark.stack_method\fR·\fI<str>\fR | ||
206 | Method·used·to·build·master·frame··(str;·default:·\'median\').·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
207 | file·is·\fBflames_obs_redchain.uves_cal_mdark.stack_method\fR·[default·=·\fImedian\fR]. | ||
208 | .TP | ||
209 | \fB\-\-uves_cal_mdark.klow\fR·\fI<float>\fR | ||
210 | Kappa·used·to·clip·low·level·values,·when·method·is·set·to·\'mean\' | ||
211 | (float;·default:·5.0).·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
212 | file·is·\fBflames_obs_redchain.uves_cal_mdark.klow\fR·[default·=·\fI5.0\fR]. | ||
213 | .TP | ||
214 | \fB\-\-uves_cal_mdark.khigh\fR·\fI<float>\fR | ||
215 | Kappa·used·to·clip·high·level·values,·when·method·is·set·to·\'mean\' | ||
216 | (float;·default:·5.0).·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
217 | file·is·\fBflames_obs_redchain.uves_cal_mdark.khigh\fR·[default·=·\fI5.0\fR]. | ||
218 | .TP | ||
219 | \fB\-\-uves_cal_mdark.niter\fR·\fI<int>\fR | ||
220 | Number·of·kappa·sigma·iterations,·when·method·is·set·to·\'mean\'··(int; | ||
221 | default:·5).·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
222 | file·is·\fBflames_obs_redchain.uves_cal_mdark.niter\fR·[default·=·\fI5\fR]. | ||
223 | .TP | ||
224 | \fB\-\-uves_cal_mdark.stack_method\fR·\fI<str>\fR | ||
225 | Method·used·to·build·master·frame··(str;·default:·\'median\').·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
226 | file·is·\fBflames_obs_redchain.uves_cal_mdark.stack_method\fR·[default·=·\fImedian\fR]. | ||
227 | .TP | ||
228 | \fB\-\-uves_cal_mdark.klow\fR·\fI<float>\fR | ||
229 | Kappa·used·to·clip·low·level·values,·when·method·is·set·to·\'mean\' | ||
230 | (float;·default:·5.0).·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
231 | file·is·\fBflames_obs_redchain.uves_cal_mdark.klow\fR·[default·=·\fI5.0\fR]. | ||
232 | .TP | ||
233 | \fB\-\-uves_cal_mdark.khigh\fR·\fI<float>\fR | ||
234 | Kappa·used·to·clip·high·level·values,·when·method·is·set·to·\'mean\' | ||
235 | (float;·default:·5.0).·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
236 | file·is·\fBflames_obs_redchain.uves_cal_mdark.khigh\fR·[default·=·\fI5.0\fR]. | ||
237 | .TP | ||
238 | \fB\-\-uves_cal_mdark.niter\fR·\fI<int>\fR | ||
239 | Number·of·kappa·sigma·iterations,·when·method·is·set·to·\'mean\'··(int; | ||
240 | default:·5).·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
241 | file·is·\fBflames_obs_redchain.uves_cal_mdark.niter\fR·[default·=·\fI5\fR]. | ||
242 | .TP | ||
243 | \fB\-\-uves_cal_mdark.qc_dark.reg.num_x\fR·\fI<int>\fR | ||
244 | Number·of·regions·along·the·X·axis·(where·mean/med/rms·are·computed). | ||
245 | (int;·default:·4).·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
246 | file·is·\fBflames_obs_redchain.uves_cal_mdark.qc_dark.reg.num_x\fR·[default·=·\fI4\fR]. | ||
247 | .TP | ||
248 | \fB\-\-uves_cal_mdark.qc_dark.reg.num_y\fR·\fI<int>\fR | ||
249 | Number·of·regions·along·the·Y·axis(where·mean/med/rms·are·computed). | ||
250 | (int;·default:·4).·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
251 | file·is·\fBflames_obs_redchain.uves_cal_mdark.qc_dark.reg.num_y\fR·[default·=·\fI4\fR]. | ||
252 | .TP | ||
253 | \fB\-\-uves_cal_mdark.qc_dark.reg.box_sx\fR·\fI<int>\fR | ||
254 | Region·X·size·[pix]·(int;·default:·100).·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
255 | file·is·\fBflames_obs_redchain.uves_cal_mdark.qc_dark.reg.box_sx\fR·[default·=·\fI100\fR]. | ||
256 | .TP | ||
257 | \fB\-\-uves_cal_mdark.qc_dark.reg.box_sy\fR·\fI<int>\fR | ||
258 | Region·Y·size·[pix]·(int;·default:·100).·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
259 | file·is·\fBflames_obs_redchain.uves_cal_mdark.qc_dark.reg.box_sy\fR·[default·=·\fI100\fR]. | ||
260 | .TP | ||
261 | \fB\-\-uves_cal_mdark.qc_dark.reg.border_x\fR·\fI<int>\fR | ||
262 | X·distance·between·the·left·hand·side·of·the·detector·and·the·left | ||
263 | hand·side·of·the·region·[pix]·(int;·default:·100).·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
264 | file·is·\fBflames_obs_redchain.uves_cal_mdark.qc_dark.reg.border_x\fR·[default·=·\fI100\fR]. | ||
265 | .TP | ||
266 | \fB\-\-uves_cal_mdark.qc_dark.reg.border_y\fR·\fI<int>\fR | ||
267 | X·distance·between·the·left·hand·side·of·the·detector·and·the·left | ||
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Offset 68, 46 lines modified | Offset 68, 14 lines modified | ||
68 | .TP | 68 | .TP |
69 | \fB\-\-paccuracy\fR·\fI<float>\fR | 69 | \fB\-\-paccuracy\fR·\fI<float>\fR |
70 | The·pointing·accuracy·(in·arcseconds)·used·to·identify·the·observed | 70 | The·pointing·accuracy·(in·arcseconds)·used·to·identify·the·observed |
71 | star·with·a·catalogue·star.·If·the·angular·separation·is·less·than | 71 | star·with·a·catalogue·star.·If·the·angular·separation·is·less·than |
72 | this·number,·the·identification·is·made.·(float;·default:·60.0).·The·full·name·of·this·option·for·the·EsoRex·configuration | 72 | this·number,·the·identification·is·made.·(float;·default:·60.0).·The·full·name·of·this·option·for·the·EsoRex·configuration |
73 | file·is·\fBuves_cal_response.efficiency.paccuracy\fR·[default·=·\fI60.0\fR]. | 73 | file·is·\fBuves_cal_response.efficiency.paccuracy\fR·[default·=·\fI60.0\fR]. |
74 | .TP | 74 | .TP |
75 | \fB\-\-efficiency.reduce.ffmethod\fR·\fI<str>\fR | ||
76 | Flat\-fielding·method.·If·set·to·\'pixel\',·flat\-fielding·is·done·in | ||
77 | pixel\-pixel·space·(before·extraction);·if·set·to·\'extract\',·flat\- | ||
78 | fielding·is·performed·in·pixel\-order·space·(i.e.·after·extraction).·If | ||
79 | set·to·\'no\',·no·flat\-field·correction·is·done.·<pixel·|·extract·|·no> | ||
80 | (str;·default:·\'no\').·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
81 | file·is·\fBuves_cal_response.efficiency.reduce.ffmethod\fR·[default·=·\fIno\fR]. | ||
82 | .TP | ||
83 | \fB\-\-efficiency.reduce.merge\fR·\fI<str>\fR | ||
84 | Order·merging·method.·If·\'optimal\',·the·flux·in·the·overlapping·region | ||
85 | is·set·to·the·(optimally·computed,·using·the·uncertainties)·average·of | ||
86 | single·order·spectra.·If·\'sum\',·the·flux·in·the·overlapping·region·is | ||
87 | computed·as·the·sum·of·the·single·order·spectra.If·\'noappend\'·the | ||
88 | spectrum·is·simply·rebinned·but·not·merged.If·flat\-fielding·is·done, | ||
89 | method·\'optimal\'·is·recommended,·otherwise·\'sum\'.·<optimal·|·sum·| | ||
90 | noappend>·(str;·default:·\'sum\').·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
91 | file·is·\fBuves_cal_response.efficiency.reduce.merge\fR·[default·=·\fIsum\fR]. | ||
92 | .TP | ||
93 | \fB\-\-efficiency.reduce.best\fR·\fI<bool>\fR | ||
94 | (optimal·extraction·only)·If·false·(fastest),·the·spectrum·is | ||
95 | extracted·only·once.·If·true·(best),·the·spectrum·is·extracted·twice, | ||
96 | the·second·time·using·improved·variance·estimates·based·on·the·first | ||
97 | iteration.·Better·variance·estimates·slightly·improve·the·obtained | ||
98 | signal·to·noise·but·at·the·cost·of·increased·execution·time·(bool; | ||
99 | default:·True).·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
100 | file·is·\fBuves_cal_response.efficiency.reduce.best\fR·[default·=·\fITrue\fR]. | ||
101 | .TP | ||
102 | \fB\-\-efficiency.reduce.extract.method\fR·\fI<str>\fR | ||
103 | Extraction·method.·<average·|·linear·|·weighted·|·optimal>·(str; | ||
104 | default:·\'linear\').·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
105 | file·is·\fBuves_cal_response.efficiency.reduce.extract.method\fR·[default·=·\fIlinear\fR]. | ||
106 | .TP | ||
107 | \fB\-\-reduce.slitlength\fR·\fI<float>\fR | 75 | \fB\-\-reduce.slitlength\fR·\fI<float>\fR |
108 | Extraction·slit·length·(in·pixels).·If·negative,·the·value·inferred | 76 | Extraction·slit·length·(in·pixels).·If·negative,·the·value·inferred |
109 | from·the·raw·frame·header·is·used·(float;·default:·\-1.0).·The·full·name·of·this·option·for·the·EsoRex·configuration | 77 | from·the·raw·frame·header·is·used·(float;·default:·\-1.0).·The·full·name·of·this·option·for·the·EsoRex·configuration |
110 | file·is·\fBuves_cal_response.reduce.slitlength\fR·[default·=·\fI\-1.0\fR]. | 78 | file·is·\fBuves_cal_response.reduce.slitlength\fR·[default·=·\fI\-1.0\fR]. |
111 | .TP | 79 | .TP |
112 | \fB\-\-reduce.skysub\fR·\fI<bool>\fR | 80 | \fB\-\-reduce.skysub\fR·\fI<bool>\fR |
113 | Do·sky\-subtraction·(only·applicable·to·linear·and·average | 81 | Do·sky\-subtraction·(only·applicable·to·linear·and·average |
Offset 169, 54 lines modified | Offset 137, 14 lines modified | ||
169 | \fB\-\-reduce.merge_delt2\fR·\fI<float>\fR | 137 | \fB\-\-reduce.merge_delt2\fR·\fI<float>\fR |
170 | Order·merging·right·hand·(long·wavelength)·cut.·To·reduce·the·amount | 138 | Order·merging·right·hand·(long·wavelength)·cut.·To·reduce·the·amount |
171 | of·order·overlapping·regions·we·allow·to·cut·short·and·long·wavelength | 139 | of·order·overlapping·regions·we·allow·to·cut·short·and·long·wavelength |
172 | ranges.·This·may·reduce·the·ripple·possibly·introduced·by·the·order | 140 | ranges.·This·may·reduce·the·ripple·possibly·introduced·by·the·order |
173 | merging.·Suggested·values·is·4·(float;·default:·0.0).·The·full·name·of·this·option·for·the·EsoRex·configuration | 141 | merging.·Suggested·values·is·4·(float;·default:·0.0).·The·full·name·of·this·option·for·the·EsoRex·configuration |
174 | file·is·\fBuves_cal_response.reduce.merge_delt2\fR·[default·=·\fI0.0\fR]. | 142 | file·is·\fBuves_cal_response.reduce.merge_delt2\fR·[default·=·\fI0.0\fR]. |
175 | .TP | 143 | .TP |
176 | \fB\-\-reduce.backsub.mmethod\fR·\fI<str>\fR | ||
177 | Background·measuring·method.·If·equal·to·\'median\'·the·background·is | ||
178 | sampled·using·the·median·of·a·subwindow.·If·\'minimum\',·the·subwindow | ||
179 | minimum·value·is·used.·If·\'no\',·no·background·subtraction·is·done. | ||
180 | (str;·default:·\'median\').·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
181 | file·is·\fBuves_cal_response.reduce.backsub.mmethod\fR·[default·=·\fImedian\fR]. | ||
182 | .TP | ||
183 | \fB\-\-reduce.backsub.npoints\fR·\fI<int>\fR | ||
184 | This·is·the·number·of·columns·in·interorder·space·used·to·sample·the | ||
185 | background.·(int;·default:·82).·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
186 | file·is·\fBuves_cal_response.reduce.backsub.npoints\fR·[default·=·\fI82\fR]. | ||
187 | .TP | ||
188 | \fB\-\-reduce.backsub.radiusy\fR·\fI<int>\fR | ||
189 | The·height·(in·pixels)·of·the·background·sampling·window·is·(2*radiusy | ||
190 | +·1).·This·parameter·is·not·corrected·for·binning.·(int;·default:·2).·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
191 | file·is·\fBuves_cal_response.reduce.backsub.radiusy\fR·[default·=·\fI2\fR]. | ||
192 | .TP | ||
193 | \fB\-\-reduce.backsub.sdegree\fR·\fI<int>\fR | ||
194 | Degree·of·interpolating·splines.·Currently·only·degree·=·1·is | ||
195 | supported·(int;·default:·1).·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
196 | file·is·\fBuves_cal_response.reduce.backsub.sdegree\fR·[default·=·\fI1\fR]. | ||
197 | .TP | ||
198 | \fB\-\-reduce.backsub.smoothx\fR·\fI<float>\fR | ||
199 | If·spline·interpolation·is·used·to·measure·the·background,·the | ||
200 | x\-radius·of·the·post\-smoothing·window·is·(smoothx·*·image_width). | ||
201 | Here,·\'image_width\'·is·the·image·width·after·binning.·If·negative,·the | ||
202 | default·values·are·used:·(25.0/4096)·for·blue·flat\-field·frames, | ||
203 | (50.0/4096)·for·red·flat\-field·frames,·(300.0/4096)·for·blue·science | ||
204 | frames·and·(300.0/4096)·for·red·science·frames.·(float;·default:·\-1.0).·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
205 | file·is·\fBuves_cal_response.reduce.backsub.smoothx\fR·[default·=·\fI\-1.0\fR]. | ||
206 | .TP | ||
207 | \fB\-\-reduce.backsub.smoothy\fR·\fI<float>\fR | ||
208 | If·spline·interpolation·is·used·to·measure·the·background,·the | ||
209 | y\-radius·of·the·post\-smoothing·window·is·(smoothy·*·image_height). | ||
210 | Here,·\'image_height\'·is·the·image·height·after·binning.·If·negative, | ||
211 | the·default·values·are·used:·(100.0/2048)·for·blue·flat\-field·frames, | ||
212 | (300.0/2048)·for·red·flat\-field·frames,·(200.0/2048)·for·blue·science | ||
213 | frames·and·(500.0/2048)·for·red·science·frames.·(float;·default:·\-1.0).·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
214 | file·is·\fBuves_cal_response.reduce.backsub.smoothy\fR·[default·=·\fI\-1.0\fR]. | ||
215 | .TP | ||
216 | \fB\-\-reduce.rebin.wavestep\fR·\fI<float>\fR | 144 | \fB\-\-reduce.rebin.wavestep\fR·\fI<float>\fR |
217 | The·bin·size·(in·w.l.u.)·in·wavelength·space.·If·negative,·a·step·size | 145 | The·bin·size·(in·w.l.u.)·in·wavelength·space.·If·negative,·a·step·size |
218 | of·2/3·*·(·average·pixel·size·)·is·used.·(float;·default:·\-1.0).·The·full·name·of·this·option·for·the·EsoRex·configuration | 146 | of·2/3·*·(·average·pixel·size·)·is·used.·(float;·default:·\-1.0).·The·full·name·of·this·option·for·the·EsoRex·configuration |
219 | file·is·\fBuves_cal_response.reduce.rebin.wavestep\fR·[default·=·\fI\-1.0\fR]. | 147 | file·is·\fBuves_cal_response.reduce.rebin.wavestep\fR·[default·=·\fI\-1.0\fR]. |
220 | .TP | 148 | .TP |
221 | \fB\-\-reduce.rebin.scale\fR·\fI<bool>\fR | 149 | \fB\-\-reduce.rebin.scale\fR·\fI<bool>\fR |
222 | Whether·or·not·to·multiply·by·the·factor·dx/dlambda·(pixels·per | 150 | Whether·or·not·to·multiply·by·the·factor·dx/dlambda·(pixels·per |
Offset 282, 14 lines modified | Offset 210, 86 lines modified | ||
282 | (optimal·extraction·only)·If·false·(fastest),·the·spectrum·is | 210 | (optimal·extraction·only)·If·false·(fastest),·the·spectrum·is |
283 | extracted·only·once.·If·true·(best),·the·spectrum·is·extracted·twice, | 211 | extracted·only·once.·If·true·(best),·the·spectrum·is·extracted·twice, |
284 | the·second·time·using·improved·variance·estimates·based·on·the·first | 212 | the·second·time·using·improved·variance·estimates·based·on·the·first |
285 | iteration.·Better·variance·estimates·slightly·improve·the·obtained | 213 | iteration.·Better·variance·estimates·slightly·improve·the·obtained |
286 | signal·to·noise·but·at·the·cost·of·increased·execution·time·(bool; | 214 | signal·to·noise·but·at·the·cost·of·increased·execution·time·(bool; |
287 | default:·True).·The·full·name·of·this·option·for·the·EsoRex·configuration | 215 | default:·True).·The·full·name·of·this·option·for·the·EsoRex·configuration |
288 | file·is·\fBuves_cal_response.reduce.extract.best\fR·[default·=·\fITrue\fR]. | 216 | file·is·\fBuves_cal_response.reduce.extract.best\fR·[default·=·\fITrue\fR]. |
217 | .TP | ||
218 | \fB\-\-reduce.backsub.mmethod\fR·\fI<str>\fR | ||
219 | Background·measuring·method.·If·equal·to·\'median\'·the·background·is | ||
220 | sampled·using·the·median·of·a·subwindow.·If·\'minimum\',·the·subwindow | ||
221 | minimum·value·is·used.·If·\'no\',·no·background·subtraction·is·done. | ||
222 | (str;·default:·\'median\').·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
223 | file·is·\fBuves_cal_response.reduce.backsub.mmethod\fR·[default·=·\fImedian\fR]. | ||
224 | .TP | ||
225 | \fB\-\-reduce.backsub.npoints\fR·\fI<int>\fR | ||
226 | This·is·the·number·of·columns·in·interorder·space·used·to·sample·the | ||
227 | background.·(int;·default:·82).·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
228 | file·is·\fBuves_cal_response.reduce.backsub.npoints\fR·[default·=·\fI82\fR]. | ||
229 | .TP | ||
230 | \fB\-\-reduce.backsub.radiusy\fR·\fI<int>\fR | ||
231 | The·height·(in·pixels)·of·the·background·sampling·window·is·(2*radiusy | ||
232 | +·1).·This·parameter·is·not·corrected·for·binning.·(int;·default:·2).·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
233 | file·is·\fBuves_cal_response.reduce.backsub.radiusy\fR·[default·=·\fI2\fR]. | ||
234 | .TP | ||
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Offset 50, 54 lines modified | Offset 50, 14 lines modified | ||
50 | hard\-coded·(as·function·of·UVES·chip).·(bool;·default:·False).·The·full·name·of·this·option·for·the·EsoRex·configuration | 50 | hard\-coded·(as·function·of·UVES·chip).·(bool;·default:·False).·The·full·name·of·this·option·for·the·EsoRex·configuration |
51 | file·is·\fBuves_cal_tflat.clean_traps\fR·[default·=·\fIFalse\fR]. | 51 | file·is·\fBuves_cal_tflat.clean_traps\fR·[default·=·\fIFalse\fR]. |
52 | .TP | 52 | .TP |
53 | \fB\-\-norm_method\fR·\fI<str>\fR | 53 | \fB\-\-norm_method\fR·\fI<str>\fR |
54 | Method·used·to·build·master·frame··(str;·default:·\'explevel\').·The·full·name·of·this·option·for·the·EsoRex·configuration | 54 | Method·used·to·build·master·frame··(str;·default:·\'explevel\').·The·full·name·of·this·option·for·the·EsoRex·configuration |
55 | file·is·\fBuves_cal_tflat.norm_method\fR·[default·=·\fIexplevel\fR]. | 55 | file·is·\fBuves_cal_tflat.norm_method\fR·[default·=·\fIexplevel\fR]. |
56 | .TP | 56 | .TP |
57 | \fB\-\-backsub.mmethod\fR·\fI<str>\fR | ||
58 | Background·measuring·method.·If·equal·to·\'median\'·the·background·is | ||
59 | sampled·using·the·median·of·a·subwindow.·If·\'minimum\',·the·subwindow | ||
60 | minimum·value·is·used.·If·\'no\',·no·background·subtraction·is·done. | ||
61 | (str;·default:·\'median\').·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
62 | file·is·\fBuves_cal_tflat.backsub.mmethod\fR·[default·=·\fImedian\fR]. | ||
63 | .TP | ||
64 | \fB\-\-backsub.npoints\fR·\fI<int>\fR | ||
65 | This·is·the·number·of·columns·in·interorder·space·used·to·sample·the | ||
66 | background.·(int;·default:·82).·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
67 | file·is·\fBuves_cal_tflat.backsub.npoints\fR·[default·=·\fI82\fR]. | ||
68 | .TP | ||
69 | \fB\-\-backsub.radiusy\fR·\fI<int>\fR | ||
70 | The·height·(in·pixels)·of·the·background·sampling·window·is·(2*radiusy | ||
71 | +·1).·This·parameter·is·not·corrected·for·binning.·(int;·default:·2).·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
72 | file·is·\fBuves_cal_tflat.backsub.radiusy\fR·[default·=·\fI2\fR]. | ||
73 | .TP | ||
74 | \fB\-\-backsub.sdegree\fR·\fI<int>\fR | ||
75 | Degree·of·interpolating·splines.·Currently·only·degree·=·1·is | ||
76 | supported·(int;·default:·1).·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
77 | file·is·\fBuves_cal_tflat.backsub.sdegree\fR·[default·=·\fI1\fR]. | ||
78 | .TP | ||
79 | \fB\-\-backsub.smoothx\fR·\fI<float>\fR | ||
80 | If·spline·interpolation·is·used·to·measure·the·background,·the | ||
81 | x\-radius·of·the·post\-smoothing·window·is·(smoothx·*·image_width). | ||
82 | Here,·\'image_width\'·is·the·image·width·after·binning.·If·negative,·the | ||
83 | default·values·are·used:·(25.0/4096)·for·blue·flat\-field·frames, | ||
84 | (50.0/4096)·for·red·flat\-field·frames,·(300.0/4096)·for·blue·science | ||
85 | frames·and·(300.0/4096)·for·red·science·frames.·(float;·default:·\-1.0).·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
86 | file·is·\fBuves_cal_tflat.backsub.smoothx\fR·[default·=·\fI\-1.0\fR]. | ||
87 | .TP | ||
88 | \fB\-\-backsub.smoothy\fR·\fI<float>\fR | ||
89 | If·spline·interpolation·is·used·to·measure·the·background,·the | ||
90 | y\-radius·of·the·post\-smoothing·window·is·(smoothy·*·image_height). | ||
91 | Here,·\'image_height\'·is·the·image·height·after·binning.·If·negative, | ||
92 | the·default·values·are·used:·(100.0/2048)·for·blue·flat\-field·frames, | ||
93 | (300.0/2048)·for·red·flat\-field·frames,·(200.0/2048)·for·blue·science | ||
94 | frames·and·(500.0/2048)·for·red·science·frames.·(float;·default:·\-1.0).·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
95 | file·is·\fBuves_cal_tflat.backsub.smoothy\fR·[default·=·\fI\-1.0\fR]. | ||
96 | .TP | ||
97 | \fB\-\-reduce.slitlength\fR·\fI<float>\fR | 57 | \fB\-\-reduce.slitlength\fR·\fI<float>\fR |
98 | Extraction·slit·length·(in·pixels).·If·negative,·the·value·inferred | 58 | Extraction·slit·length·(in·pixels).·If·negative,·the·value·inferred |
99 | from·the·raw·frame·header·is·used·(float;·default:·\-1.0).·The·full·name·of·this·option·for·the·EsoRex·configuration | 59 | from·the·raw·frame·header·is·used·(float;·default:·\-1.0).·The·full·name·of·this·option·for·the·EsoRex·configuration |
100 | file·is·\fBuves_cal_tflat.reduce.slitlength\fR·[default·=·\fI\-1.0\fR]. | 60 | file·is·\fBuves_cal_tflat.reduce.slitlength\fR·[default·=·\fI\-1.0\fR]. |
101 | .TP | 61 | .TP |
102 | \fB\-\-reduce.skysub\fR·\fI<bool>\fR | 62 | \fB\-\-reduce.skysub\fR·\fI<bool>\fR |
103 | Do·sky\-subtraction·(only·applicable·to·linear·and·average | 63 | Do·sky\-subtraction·(only·applicable·to·linear·and·average |
Offset 159, 54 lines modified | Offset 119, 14 lines modified | ||
159 | \fB\-\-reduce.merge_delt2\fR·\fI<float>\fR | 119 | \fB\-\-reduce.merge_delt2\fR·\fI<float>\fR |
160 | Order·merging·right·hand·(long·wavelength)·cut.·To·reduce·the·amount | 120 | Order·merging·right·hand·(long·wavelength)·cut.·To·reduce·the·amount |
161 | of·order·overlapping·regions·we·allow·to·cut·short·and·long·wavelength | 121 | of·order·overlapping·regions·we·allow·to·cut·short·and·long·wavelength |
162 | ranges.·This·may·reduce·the·ripple·possibly·introduced·by·the·order | 122 | ranges.·This·may·reduce·the·ripple·possibly·introduced·by·the·order |
163 | merging.·Suggested·values·is·4·(float;·default:·0.0).·The·full·name·of·this·option·for·the·EsoRex·configuration | 123 | merging.·Suggested·values·is·4·(float;·default:·0.0).·The·full·name·of·this·option·for·the·EsoRex·configuration |
164 | file·is·\fBuves_cal_tflat.reduce.merge_delt2\fR·[default·=·\fI0.0\fR]. | 124 | file·is·\fBuves_cal_tflat.reduce.merge_delt2\fR·[default·=·\fI0.0\fR]. |
165 | .TP | 125 | .TP |
166 | \fB\-\-reduce.backsub.mmethod\fR·\fI<str>\fR | ||
167 | Background·measuring·method.·If·equal·to·\'median\'·the·background·is | ||
168 | sampled·using·the·median·of·a·subwindow.·If·\'minimum\',·the·subwindow | ||
169 | minimum·value·is·used.·If·\'no\',·no·background·subtraction·is·done. | ||
170 | (str;·default:·\'median\').·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
171 | file·is·\fBuves_cal_tflat.reduce.backsub.mmethod\fR·[default·=·\fImedian\fR]. | ||
172 | .TP | ||
173 | \fB\-\-reduce.backsub.npoints\fR·\fI<int>\fR | ||
174 | This·is·the·number·of·columns·in·interorder·space·used·to·sample·the | ||
175 | background.·(int;·default:·82).·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
176 | file·is·\fBuves_cal_tflat.reduce.backsub.npoints\fR·[default·=·\fI82\fR]. | ||
177 | .TP | ||
178 | \fB\-\-reduce.backsub.radiusy\fR·\fI<int>\fR | ||
179 | The·height·(in·pixels)·of·the·background·sampling·window·is·(2*radiusy | ||
180 | +·1).·This·parameter·is·not·corrected·for·binning.·(int;·default:·2).·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
181 | file·is·\fBuves_cal_tflat.reduce.backsub.radiusy\fR·[default·=·\fI2\fR]. | ||
182 | .TP | ||
183 | \fB\-\-reduce.backsub.sdegree\fR·\fI<int>\fR | ||
184 | Degree·of·interpolating·splines.·Currently·only·degree·=·1·is | ||
185 | supported·(int;·default:·1).·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
186 | file·is·\fBuves_cal_tflat.reduce.backsub.sdegree\fR·[default·=·\fI1\fR]. | ||
187 | .TP | ||
188 | \fB\-\-reduce.backsub.smoothx\fR·\fI<float>\fR | ||
189 | If·spline·interpolation·is·used·to·measure·the·background,·the | ||
190 | x\-radius·of·the·post\-smoothing·window·is·(smoothx·*·image_width). | ||
191 | Here,·\'image_width\'·is·the·image·width·after·binning.·If·negative,·the | ||
192 | default·values·are·used:·(25.0/4096)·for·blue·flat\-field·frames, | ||
193 | (50.0/4096)·for·red·flat\-field·frames,·(300.0/4096)·for·blue·science | ||
194 | frames·and·(300.0/4096)·for·red·science·frames.·(float;·default:·\-1.0).·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
195 | file·is·\fBuves_cal_tflat.reduce.backsub.smoothx\fR·[default·=·\fI\-1.0\fR]. | ||
196 | .TP | ||
197 | \fB\-\-reduce.backsub.smoothy\fR·\fI<float>\fR | ||
198 | If·spline·interpolation·is·used·to·measure·the·background,·the | ||
199 | y\-radius·of·the·post\-smoothing·window·is·(smoothy·*·image_height). | ||
200 | Here,·\'image_height\'·is·the·image·height·after·binning.·If·negative, | ||
201 | the·default·values·are·used:·(100.0/2048)·for·blue·flat\-field·frames, | ||
202 | (300.0/2048)·for·red·flat\-field·frames,·(200.0/2048)·for·blue·science | ||
203 | frames·and·(500.0/2048)·for·red·science·frames.·(float;·default:·\-1.0).·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
204 | file·is·\fBuves_cal_tflat.reduce.backsub.smoothy\fR·[default·=·\fI\-1.0\fR]. | ||
205 | .TP | ||
206 | \fB\-\-reduce.rebin.wavestep\fR·\fI<float>\fR | 126 | \fB\-\-reduce.rebin.wavestep\fR·\fI<float>\fR |
207 | The·bin·size·(in·w.l.u.)·in·wavelength·space.·If·negative,·a·step·size | 127 | The·bin·size·(in·w.l.u.)·in·wavelength·space.·If·negative,·a·step·size |
208 | of·2/3·*·(·average·pixel·size·)·is·used.·(float;·default:·\-1.0).·The·full·name·of·this·option·for·the·EsoRex·configuration | 128 | of·2/3·*·(·average·pixel·size·)·is·used.·(float;·default:·\-1.0).·The·full·name·of·this·option·for·the·EsoRex·configuration |
209 | file·is·\fBuves_cal_tflat.reduce.rebin.wavestep\fR·[default·=·\fI\-1.0\fR]. | 129 | file·is·\fBuves_cal_tflat.reduce.rebin.wavestep\fR·[default·=·\fI\-1.0\fR]. |
210 | .TP | 130 | .TP |
211 | \fB\-\-reduce.rebin.scale\fR·\fI<bool>\fR | 131 | \fB\-\-reduce.rebin.scale\fR·\fI<bool>\fR |
212 | Whether·or·not·to·multiply·by·the·factor·dx/dlambda·(pixels·per | 132 | Whether·or·not·to·multiply·by·the·factor·dx/dlambda·(pixels·per |
Offset 272, 14 lines modified | Offset 192, 94 lines modified | ||
272 | (optimal·extraction·only)·If·false·(fastest),·the·spectrum·is | 192 | (optimal·extraction·only)·If·false·(fastest),·the·spectrum·is |
273 | extracted·only·once.·If·true·(best),·the·spectrum·is·extracted·twice, | 193 | extracted·only·once.·If·true·(best),·the·spectrum·is·extracted·twice, |
274 | the·second·time·using·improved·variance·estimates·based·on·the·first | 194 | the·second·time·using·improved·variance·estimates·based·on·the·first |
275 | iteration.·Better·variance·estimates·slightly·improve·the·obtained | 195 | iteration.·Better·variance·estimates·slightly·improve·the·obtained |
276 | signal·to·noise·but·at·the·cost·of·increased·execution·time·(bool; | 196 | signal·to·noise·but·at·the·cost·of·increased·execution·time·(bool; |
277 | default:·True).·The·full·name·of·this·option·for·the·EsoRex·configuration | 197 | default:·True).·The·full·name·of·this·option·for·the·EsoRex·configuration |
278 | file·is·\fBuves_cal_tflat.reduce.extract.best\fR·[default·=·\fITrue\fR]. | 198 | file·is·\fBuves_cal_tflat.reduce.extract.best\fR·[default·=·\fITrue\fR]. |
199 | .TP | ||
200 | \fB\-\-reduce.backsub.mmethod\fR·\fI<str>\fR | ||
201 | Background·measuring·method.·If·equal·to·\'median\'·the·background·is | ||
202 | sampled·using·the·median·of·a·subwindow.·If·\'minimum\',·the·subwindow | ||
203 | minimum·value·is·used.·If·\'no\',·no·background·subtraction·is·done. | ||
204 | (str;·default:·\'median\').·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
205 | file·is·\fBuves_cal_tflat.reduce.backsub.mmethod\fR·[default·=·\fImedian\fR]. | ||
206 | .TP | ||
207 | \fB\-\-reduce.backsub.npoints\fR·\fI<int>\fR | ||
208 | This·is·the·number·of·columns·in·interorder·space·used·to·sample·the | ||
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Offset 187, 14 lines modified | Offset 187, 27 lines modified | ||
187 | file·is·\fBuves_cal_wavecal.calibrate.tolerance\fR·[default·=·\fI0.6\fR]. | 187 | file·is·\fBuves_cal_wavecal.calibrate.tolerance\fR·[default·=·\fI0.6\fR]. |
188 | .TP | 188 | .TP |
189 | \fB\-\-kappa\fR·\fI<float>\fR | 189 | \fB\-\-kappa\fR·\fI<float>\fR |
190 | Lines·with·residuals·more·then·kappa·stdev·are·rejected·from·the·final | 190 | Lines·with·residuals·more·then·kappa·stdev·are·rejected·from·the·final |
191 | fit·(float;·default:·4.0).·The·full·name·of·this·option·for·the·EsoRex·configuration | 191 | fit·(float;·default:·4.0).·The·full·name·of·this·option·for·the·EsoRex·configuration |
192 | file·is·\fBuves_cal_wavecal.calibrate.kappa\fR·[default·=·\fI4.0\fR]. | 192 | file·is·\fBuves_cal_wavecal.calibrate.kappa\fR·[default·=·\fI4.0\fR]. |
193 | .TP | 193 | .TP |
194 | \fB\-\-rebin.wavestep\fR·\fI<float>\fR | ||
195 | The·bin·size·(in·w.l.u.)·in·wavelength·space.·If·negative,·a·step·size | ||
196 | of·2/3·*·(·average·pixel·size·)·is·used.·(float;·default:·\-1.0).·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
197 | file·is·\fBuves_cal_wavecal.rebin.wavestep\fR·[default·=·\fI\-1.0\fR]. | ||
198 | .TP | ||
199 | \fB\-\-rebin.scale\fR·\fI<bool>\fR | ||
200 | Whether·or·not·to·multiply·by·the·factor·dx/dlambda·(pixels·per | ||
201 | wavelength)·during·the·rebinning.·This·option·is·disabled·as·default | ||
202 | in·concordance·with·the·method·used·in·the·MIDAS·pipeline.·This·option | ||
203 | should·be·set·to·true·to·convert·the·observed·flux·(in·pixel\-space)·to | ||
204 | a·flux·per·wavelength·(in·wavelength\-space).·(bool;·default:·False).·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
205 | file·is·\fBuves_cal_wavecal.rebin.scale\fR·[default·=·\fIFalse\fR]. | ||
206 | .TP | ||
194 | \fB\-\-extract.method\fR·\fI<str>\fR | 207 | \fB\-\-extract.method\fR·\fI<str>\fR |
195 | Extraction·method.·(2d/optimal·not·supported·by·uves_cal_wavecal, | 208 | Extraction·method.·(2d/optimal·not·supported·by·uves_cal_wavecal, |
196 | weighted·supported·only·by·uves_cal_wavecal,·2d·not·supported·by | 209 | weighted·supported·only·by·uves_cal_wavecal,·2d·not·supported·by |
197 | uves_cal_response)·(str;·default:·\'average\').·The·full·name·of·this·option·for·the·EsoRex·configuration | 210 | uves_cal_response)·(str;·default:·\'average\').·The·full·name·of·this·option·for·the·EsoRex·configuration |
198 | file·is·\fBuves_cal_wavecal.extract.method\fR·[default·=·\fIaverage\fR]. | 211 | file·is·\fBuves_cal_wavecal.extract.method\fR·[default·=·\fIaverage\fR]. |
199 | .TP | 212 | .TP |
200 | \fB\-\-extract.kappa\fR·\fI<float>\fR | 213 | \fB\-\-extract.kappa\fR·\fI<float>\fR |
Offset 247, 27 lines modified | Offset 260, 14 lines modified | ||
247 | (optimal·extraction·only)·If·false·(fastest),·the·spectrum·is | 260 | (optimal·extraction·only)·If·false·(fastest),·the·spectrum·is |
248 | extracted·only·once.·If·true·(best),·the·spectrum·is·extracted·twice, | 261 | extracted·only·once.·If·true·(best),·the·spectrum·is·extracted·twice, |
249 | the·second·time·using·improved·variance·estimates·based·on·the·first | 262 | the·second·time·using·improved·variance·estimates·based·on·the·first |
250 | iteration.·Better·variance·estimates·slightly·improve·the·obtained | 263 | iteration.·Better·variance·estimates·slightly·improve·the·obtained |
251 | signal·to·noise·but·at·the·cost·of·increased·execution·time·(bool; | 264 | signal·to·noise·but·at·the·cost·of·increased·execution·time·(bool; |
252 | default:·True).·The·full·name·of·this·option·for·the·EsoRex·configuration | 265 | default:·True).·The·full·name·of·this·option·for·the·EsoRex·configuration |
253 | file·is·\fBuves_cal_wavecal.extract.best\fR·[default·=·\fITrue\fR]. | 266 | file·is·\fBuves_cal_wavecal.extract.best\fR·[default·=·\fITrue\fR]. |
254 | .TP | ||
255 | \fB\-\-rebin.wavestep\fR·\fI<float>\fR | ||
256 | The·bin·size·(in·w.l.u.)·in·wavelength·space.·If·negative,·a·step·size | ||
257 | of·2/3·*·(·average·pixel·size·)·is·used.·(float;·default:·\-1.0).·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
258 | file·is·\fBuves_cal_wavecal.rebin.wavestep\fR·[default·=·\fI\-1.0\fR]. | ||
259 | .TP | ||
260 | \fB\-\-rebin.scale\fR·\fI<bool>\fR | ||
261 | Whether·or·not·to·multiply·by·the·factor·dx/dlambda·(pixels·per | ||
262 | wavelength)·during·the·rebinning.·This·option·is·disabled·as·default | ||
263 | in·concordance·with·the·method·used·in·the·MIDAS·pipeline.·This·option | ||
264 | should·be·set·to·true·to·convert·the·observed·flux·(in·pixel\-space)·to | ||
265 | a·flux·per·wavelength·(in·wavelength\-space).·(bool;·default:·False).·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
266 | file·is·\fBuves_cal_wavecal.rebin.scale\fR·[default·=·\fIFalse\fR]. | ||
267 | .PP | 267 | .PP |
268 | Note·that·it·is·possible·to·create·a·configuration·file·containing·these | 268 | Note·that·it·is·possible·to·create·a·configuration·file·containing·these |
269 | options,·along·with·suitable·default·values.·Please·refer·to·the·details | 269 | options,·along·with·suitable·default·values.·Please·refer·to·the·details |
270 | provided·by·the·'esorex·\-\-help'·command. | 270 | provided·by·the·'esorex·\-\-help'·command. |
271 | .SH·SEE·ALSO | 271 | .SH·SEE·ALSO |
Offset 62, 324 lines modified | Offset 62, 14 lines modified | ||
62 | file·is·\fBuves.plotter\fR·[default·=·\fIno\fR]. | 62 | file·is·\fBuves.plotter\fR·[default·=·\fIno\fR]. |
63 | .TP | 63 | .TP |
64 | \fB\-\-process_chip\fR·\fI<str>\fR | 64 | \fB\-\-process_chip\fR·\fI<str>\fR |
65 | For·RED·arm·data·process·the·redl,·redu,·or·both·chip(s)·(str; | 65 | For·RED·arm·data·process·the·redl,·redu,·or·both·chip(s)·(str; |
66 | default:·\'both\').·The·full·name·of·this·option·for·the·EsoRex·configuration | 66 | default:·\'both\').·The·full·name·of·this·option·for·the·EsoRex·configuration |
67 | file·is·\fBuves.process_chip\fR·[default·=·\fIboth\fR]. | 67 | file·is·\fBuves.process_chip\fR·[default·=·\fIboth\fR]. |
68 | .TP | 68 | .TP |
69 | \fB\-\-uves_cal_mflat.norm_method\fR·\fI<str>\fR | ||
70 | Method·used·to·build·master·frame··(str;·default:·\'explevel\').·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
71 | file·is·\fBuves_obs_redchain.uves_cal_mflat.norm_method\fR·[default·=·\fIexplevel\fR]. | ||
72 | .TP | ||
73 | \fB\-\-uves_cal_mflat.backsub.mmethod\fR·\fI<str>\fR | ||
74 | Background·measuring·method.·If·equal·to·\'median\'·the·background·is | ||
75 | sampled·using·the·median·of·a·subwindow.·If·\'minimum\',·the·subwindow | ||
76 | minimum·value·is·used.·If·\'no\',·no·background·subtraction·is·done. | ||
77 | (str;·default:·\'median\').·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
78 | file·is·\fBuves_obs_redchain.uves_cal_mflat.backsub.mmethod\fR·[default·=·\fImedian\fR]. | ||
79 | .TP | ||
80 | \fB\-\-uves_cal_mflat.backsub.npoints\fR·\fI<int>\fR | ||
81 | This·is·the·number·of·columns·in·interorder·space·used·to·sample·the | ||
82 | background.·(int;·default:·82).·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
83 | file·is·\fBuves_obs_redchain.uves_cal_mflat.backsub.npoints\fR·[default·=·\fI82\fR]. | ||
84 | .TP | ||
85 | \fB\-\-uves_cal_mflat.backsub.radiusy\fR·\fI<int>\fR | ||
86 | The·height·(in·pixels)·of·the·background·sampling·window·is·(2*radiusy | ||
87 | +·1).·This·parameter·is·not·corrected·for·binning.·(int;·default:·2).·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
88 | file·is·\fBuves_obs_redchain.uves_cal_mflat.backsub.radiusy\fR·[default·=·\fI2\fR]. | ||
89 | .TP | ||
90 | \fB\-\-uves_cal_mflat.backsub.sdegree\fR·\fI<int>\fR | ||
91 | Degree·of·interpolating·splines.·Currently·only·degree·=·1·is | ||
92 | supported·(int;·default:·1).·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
93 | file·is·\fBuves_obs_redchain.uves_cal_mflat.backsub.sdegree\fR·[default·=·\fI1\fR]. | ||
94 | .TP | ||
95 | \fB\-\-uves_cal_mflat.backsub.smoothx\fR·\fI<float>\fR | ||
96 | If·spline·interpolation·is·used·to·measure·the·background,·the | ||
97 | x\-radius·of·the·post\-smoothing·window·is·(smoothx·*·image_width). | ||
98 | Here,·\'image_width\'·is·the·image·width·after·binning.·If·negative,·the | ||
99 | default·values·are·used:·(25.0/4096)·for·blue·flat\-field·frames, | ||
100 | (50.0/4096)·for·red·flat\-field·frames,·(300.0/4096)·for·blue·science | ||
101 | frames·and·(300.0/4096)·for·red·science·frames.·(float;·default:·\-1.0).·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
102 | file·is·\fBuves_obs_redchain.uves_cal_mflat.backsub.smoothx\fR·[default·=·\fI\-1.0\fR]. | ||
103 | .TP | ||
104 | \fB\-\-uves_cal_mflat.backsub.smoothy\fR·\fI<float>\fR | ||
105 | If·spline·interpolation·is·used·to·measure·the·background,·the | ||
106 | y\-radius·of·the·post\-smoothing·window·is·(smoothy·*·image_height). | ||
107 | Here,·\'image_height\'·is·the·image·height·after·binning.·If·negative, | ||
108 | the·default·values·are·used:·(100.0/2048)·for·blue·flat\-field·frames, | ||
109 | (300.0/2048)·for·red·flat\-field·frames,·(200.0/2048)·for·blue·science | ||
110 | frames·and·(500.0/2048)·for·red·science·frames.·(float;·default:·\-1.0).·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
111 | file·is·\fBuves_obs_redchain.uves_cal_mflat.backsub.smoothy\fR·[default·=·\fI\-1.0\fR]. | ||
112 | .TP | ||
113 | \fB\-\-uves_obs_scired.clean_traps\fR·\fI<bool>\fR | ||
114 | Clean·detector·traps.·If·TRUE·detector·traps·are·interpolated.The·bad | ||
115 | pixels·are·replaced·by·the·average·of·thenearest·good·pixels·in·the | ||
116 | same·column,·or·simply·marked·as·bad.·The·positions·of·bad·pixels·are | ||
117 | hard\-coded·(as·function·of·UVES·chip).·(bool;·default:·False).·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
118 | file·is·\fBuves_obs_redchain.uves_obs_scired.clean_traps\fR·[default·=·\fIFalse\fR]. | ||
119 | .TP | ||
120 | \fB\-\-uves_obs_scired.reduce.slitlength\fR·\fI<float>\fR | ||
121 | Extraction·slit·length·(in·pixels).·If·negative,·the·value·inferred | ||
122 | from·the·raw·frame·header·is·used·(float;·default:·\-1.0).·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
123 | file·is·\fBuves_obs_redchain.uves_obs_scired.reduce.slitlength\fR·[default·=·\fI\-1.0\fR]. | ||
124 | .TP | ||
125 | \fB\-\-uves_obs_scired.reduce.skysub\fR·\fI<bool>\fR | ||
126 | Do·sky\-subtraction·(only·applicable·to·linear·and·average | ||
127 | extractions)?·(bool;·default:·True).·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
128 | file·is·\fBuves_obs_redchain.uves_obs_scired.reduce.skysub\fR·[default·=·\fITrue\fR]. | ||
129 | .TP | ||
130 | \fB\-\-uves_obs_scired.reduce.objoffset\fR·\fI<float>\fR | ||
131 | Offset·(in·pixels)·of·extraction·slit·with·respect·to·center·of·order. | ||
132 | This·parameter·applies·to·linear/average/optimal·extraction.·For | ||
133 | linear/average·extraction,·if·the·related·parameter·objslit·is | ||
134 | negative,·the·offset·is·automatically·determined·by·measuring·the | ||
135 | actual·object·position.··(float;·default:·0.0).·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
136 | file·is·\fBuves_obs_redchain.uves_obs_scired.reduce.objoffset\fR·[default·=·\fI0.0\fR]. | ||
137 | .TP | ||
138 | \fB\-\-uves_obs_scired.reduce.objslit\fR·\fI<float>\fR | ||
139 | Object·window·size·(in·pixels).·This·must·be·less·than·the·total·slit | ||
140 | length.·If·negative,·the·default·value·(half·of·full·slit·length)·is | ||
141 | used.·The·upper·and·lower·sky·windows·are·defined·as·the·part·of·the | ||
142 | full·slit·(if·any)·outside·the·object·window.·The·center·of·the·object | ||
143 | window·is·determined·by·the·offset·parameter.·This·parameter·does·not | ||
144 | apply·to·optimal·extraction.·(float;·default:·\-1.0).·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
145 | file·is·\fBuves_obs_redchain.uves_obs_scired.reduce.objslit\fR·[default·=·\fI\-1.0\fR]. | ||
146 | .TP | ||
147 | \fB\-\-uves_obs_scired.reduce.tiltcorr\fR·\fI<bool>\fR | ||
148 | If·enabled·(recommended),·the·provided·dispersion·solutions·obtained | ||
149 | at·different·slit·positions·are·interpolated·linearly·at·the·actually | ||
150 | measured·position·of·the·object/sky.·Line·tilt·correction·is·currently | ||
151 | not·supported·for·2d·extraction,·in·which·case·the·dispersion·solution | ||
152 | obtained·at·the·middle·of·the·slit·is·always·used.·(bool;·default: | ||
153 | True).·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
154 | file·is·\fBuves_obs_redchain.uves_obs_scired.reduce.tiltcorr\fR·[default·=·\fITrue\fR]. | ||
155 | .TP | ||
156 | \fB\-\-uves_obs_scired.reduce.ffmethod\fR·\fI<str>\fR | ||
157 | Flat\-fielding·method.·If·set·to·\'pixel\',·flat\-fielding·is·done·in | ||
158 | pixel\-pixel·space·(before·extraction);·if·set·to·\'extract\',·flat\- | ||
159 | fielding·is·performed·in·pixel\-order·space·(i.e.·after·extraction).·If | ||
160 | set·to·\'no\',·no·flat\-field·correction·is·done·(str;·default: | ||
161 | \'extract\').·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
162 | file·is·\fBuves_obs_redchain.uves_obs_scired.reduce.ffmethod\fR·[default·=·\fIextract\fR]. | ||
163 | .TP | ||
164 | \fB\-\-uves_obs_scired.reduce.merge\fR·\fI<str>\fR | ||
165 | Order·merging·method.·If·\'optimal\',·the·flux·in·the·overlapping·region | ||
166 | is·set·to·the·(optimally·computed,·using·the·uncertainties)·average·of | ||
167 | single·order·spectra.·If·\'sum\',·the·flux·in·the·overlapping·region·is | ||
168 | computed·as·the·sum·of·the·single·order·spectra.·If·\'noappend\'·the | ||
169 | spectrum·is·simply·rebinned·but·not·merged.If·flat\-fielding·is·done, | ||
170 | method·\'optimal\'·is·recommended,·otherwise·\'sum\'.·(str;·default: | ||
171 | \'optimal\').·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
172 | file·is·\fBuves_obs_redchain.uves_obs_scired.reduce.merge\fR·[default·=·\fIoptimal\fR]. | ||
173 | .TP | ||
174 | \fB\-\-uves_obs_scired.reduce.merge_delt1\fR·\fI<float>\fR | ||
175 | Order·merging·left·hand·(short·wavelength)·cut.·To·reduce·the·amount | ||
176 | of·order·overlapping·regions·we·allow·to·cut·short·and·long·wavelength | ||
177 | ranges.·This·may·reduce·the·ripple·possibly·introduced·by·the·order | ||
178 | merging.·Suggested·values·are:·10·(W<=390),·12·(390<W<=437, | ||
179 | 520<W<=564),·14·(437<W<=520,·564<W)··(float;·default:·0.0).·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
180 | file·is·\fBuves_obs_redchain.uves_obs_scired.reduce.merge_delt1\fR·[default·=·\fI0.0\fR]. | ||
181 | .TP | ||
182 | \fB\-\-uves_obs_scired.reduce.merge_delt2\fR·\fI<float>\fR | ||
183 | Order·merging·right·hand·(long·wavelength)·cut.·To·reduce·the·amount | ||
184 | of·order·overlapping·regions·we·allow·to·cut·short·and·long·wavelength | ||
185 | ranges.·This·may·reduce·the·ripple·possibly·introduced·by·the·order | ||
186 | merging.·Suggested·values·is·4·(float;·default:·0.0).·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
187 | file·is·\fBuves_obs_redchain.uves_obs_scired.reduce.merge_delt2\fR·[default·=·\fI0.0\fR]. | ||
188 | .TP | ||
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Offset 154, 54 lines modified | Offset 154, 14 lines modified | ||
154 | \fB\-\-reduce.merge_delt2\fR·\fI<float>\fR | 154 | \fB\-\-reduce.merge_delt2\fR·\fI<float>\fR |
155 | Order·merging·right·hand·(long·wavelength)·cut.·To·reduce·the·amount | 155 | Order·merging·right·hand·(long·wavelength)·cut.·To·reduce·the·amount |
156 | of·order·overlapping·regions·we·allow·to·cut·short·and·long·wavelength | 156 | of·order·overlapping·regions·we·allow·to·cut·short·and·long·wavelength |
157 | ranges.·This·may·reduce·the·ripple·possibly·introduced·by·the·order | 157 | ranges.·This·may·reduce·the·ripple·possibly·introduced·by·the·order |
158 | merging.·Suggested·values·is·4·(float;·default:·0.0).·The·full·name·of·this·option·for·the·EsoRex·configuration | 158 | merging.·Suggested·values·is·4·(float;·default:·0.0).·The·full·name·of·this·option·for·the·EsoRex·configuration |
159 | file·is·\fBuves_obs_scired.reduce.merge_delt2\fR·[default·=·\fI0.0\fR]. | 159 | file·is·\fBuves_obs_scired.reduce.merge_delt2\fR·[default·=·\fI0.0\fR]. |
160 | .TP | 160 | .TP |
161 | \fB\-\-reduce.backsub.mmethod\fR·\fI<str>\fR | ||
162 | Background·measuring·method.·If·equal·to·\'median\'·the·background·is | ||
163 | sampled·using·the·median·of·a·subwindow.·If·\'minimum\',·the·subwindow | ||
164 | minimum·value·is·used.·If·\'no\',·no·background·subtraction·is·done. | ||
165 | (str;·default:·\'median\').·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
166 | file·is·\fBuves_obs_scired.reduce.backsub.mmethod\fR·[default·=·\fImedian\fR]. | ||
167 | .TP | ||
168 | \fB\-\-reduce.backsub.npoints\fR·\fI<int>\fR | ||
169 | This·is·the·number·of·columns·in·interorder·space·used·to·sample·the | ||
170 | background.·(int;·default:·82).·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
171 | file·is·\fBuves_obs_scired.reduce.backsub.npoints\fR·[default·=·\fI82\fR]. | ||
172 | .TP | ||
173 | \fB\-\-reduce.backsub.radiusy\fR·\fI<int>\fR | ||
174 | The·height·(in·pixels)·of·the·background·sampling·window·is·(2*radiusy | ||
175 | +·1).·This·parameter·is·not·corrected·for·binning.·(int;·default:·2).·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
176 | file·is·\fBuves_obs_scired.reduce.backsub.radiusy\fR·[default·=·\fI2\fR]. | ||
177 | .TP | ||
178 | \fB\-\-reduce.backsub.sdegree\fR·\fI<int>\fR | ||
179 | Degree·of·interpolating·splines.·Currently·only·degree·=·1·is | ||
180 | supported·(int;·default:·1).·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
181 | file·is·\fBuves_obs_scired.reduce.backsub.sdegree\fR·[default·=·\fI1\fR]. | ||
182 | .TP | ||
183 | \fB\-\-reduce.backsub.smoothx\fR·\fI<float>\fR | ||
184 | If·spline·interpolation·is·used·to·measure·the·background,·the | ||
185 | x\-radius·of·the·post\-smoothing·window·is·(smoothx·*·image_width). | ||
186 | Here,·\'image_width\'·is·the·image·width·after·binning.·If·negative,·the | ||
187 | default·values·are·used:·(25.0/4096)·for·blue·flat\-field·frames, | ||
188 | (50.0/4096)·for·red·flat\-field·frames,·(300.0/4096)·for·blue·science | ||
189 | frames·and·(300.0/4096)·for·red·science·frames.·(float;·default:·\-1.0).·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
190 | file·is·\fBuves_obs_scired.reduce.backsub.smoothx\fR·[default·=·\fI\-1.0\fR]. | ||
191 | .TP | ||
192 | \fB\-\-reduce.backsub.smoothy\fR·\fI<float>\fR | ||
193 | If·spline·interpolation·is·used·to·measure·the·background,·the | ||
194 | y\-radius·of·the·post\-smoothing·window·is·(smoothy·*·image_height). | ||
195 | Here,·\'image_height\'·is·the·image·height·after·binning.·If·negative, | ||
196 | the·default·values·are·used:·(100.0/2048)·for·blue·flat\-field·frames, | ||
197 | (300.0/2048)·for·red·flat\-field·frames,·(200.0/2048)·for·blue·science | ||
198 | frames·and·(500.0/2048)·for·red·science·frames.·(float;·default:·\-1.0).·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
199 | file·is·\fBuves_obs_scired.reduce.backsub.smoothy\fR·[default·=·\fI\-1.0\fR]. | ||
200 | .TP | ||
201 | \fB\-\-reduce.rebin.wavestep\fR·\fI<float>\fR | 161 | \fB\-\-reduce.rebin.wavestep\fR·\fI<float>\fR |
202 | The·bin·size·(in·w.l.u.)·in·wavelength·space.·If·negative,·a·step·size | 162 | The·bin·size·(in·w.l.u.)·in·wavelength·space.·If·negative,·a·step·size |
203 | of·2/3·*·(·average·pixel·size·)·is·used.·(float;·default:·\-1.0).·The·full·name·of·this·option·for·the·EsoRex·configuration | 163 | of·2/3·*·(·average·pixel·size·)·is·used.·(float;·default:·\-1.0).·The·full·name·of·this·option·for·the·EsoRex·configuration |
204 | file·is·\fBuves_obs_scired.reduce.rebin.wavestep\fR·[default·=·\fI\-1.0\fR]. | 164 | file·is·\fBuves_obs_scired.reduce.rebin.wavestep\fR·[default·=·\fI\-1.0\fR]. |
205 | .TP | 165 | .TP |
206 | \fB\-\-reduce.rebin.scale\fR·\fI<bool>\fR | 166 | \fB\-\-reduce.rebin.scale\fR·\fI<bool>\fR |
207 | Whether·or·not·to·multiply·by·the·factor·dx/dlambda·(pixels·per | 167 | Whether·or·not·to·multiply·by·the·factor·dx/dlambda·(pixels·per |
Offset 267, 14 lines modified | Offset 227, 54 lines modified | ||
267 | (optimal·extraction·only)·If·false·(fastest),·the·spectrum·is | 227 | (optimal·extraction·only)·If·false·(fastest),·the·spectrum·is |
268 | extracted·only·once.·If·true·(best),·the·spectrum·is·extracted·twice, | 228 | extracted·only·once.·If·true·(best),·the·spectrum·is·extracted·twice, |
269 | the·second·time·using·improved·variance·estimates·based·on·the·first | 229 | the·second·time·using·improved·variance·estimates·based·on·the·first |
270 | iteration.·Better·variance·estimates·slightly·improve·the·obtained | 230 | iteration.·Better·variance·estimates·slightly·improve·the·obtained |
271 | signal·to·noise·but·at·the·cost·of·increased·execution·time·(bool; | 231 | signal·to·noise·but·at·the·cost·of·increased·execution·time·(bool; |
272 | default:·True).·The·full·name·of·this·option·for·the·EsoRex·configuration | 232 | default:·True).·The·full·name·of·this·option·for·the·EsoRex·configuration |
273 | file·is·\fBuves_obs_scired.reduce.extract.best\fR·[default·=·\fITrue\fR]. | 233 | file·is·\fBuves_obs_scired.reduce.extract.best\fR·[default·=·\fITrue\fR]. |
234 | .TP | ||
235 | \fB\-\-reduce.backsub.mmethod\fR·\fI<str>\fR | ||
236 | Background·measuring·method.·If·equal·to·\'median\'·the·background·is | ||
237 | sampled·using·the·median·of·a·subwindow.·If·\'minimum\',·the·subwindow | ||
238 | minimum·value·is·used.·If·\'no\',·no·background·subtraction·is·done. | ||
239 | (str;·default:·\'median\').·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
240 | file·is·\fBuves_obs_scired.reduce.backsub.mmethod\fR·[default·=·\fImedian\fR]. | ||
241 | .TP | ||
242 | \fB\-\-reduce.backsub.npoints\fR·\fI<int>\fR | ||
243 | This·is·the·number·of·columns·in·interorder·space·used·to·sample·the | ||
244 | background.·(int;·default:·82).·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
245 | file·is·\fBuves_obs_scired.reduce.backsub.npoints\fR·[default·=·\fI82\fR]. | ||
246 | .TP | ||
247 | \fB\-\-reduce.backsub.radiusy\fR·\fI<int>\fR | ||
248 | The·height·(in·pixels)·of·the·background·sampling·window·is·(2*radiusy | ||
249 | +·1).·This·parameter·is·not·corrected·for·binning.·(int;·default:·2).·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
250 | file·is·\fBuves_obs_scired.reduce.backsub.radiusy\fR·[default·=·\fI2\fR]. | ||
251 | .TP | ||
252 | \fB\-\-reduce.backsub.sdegree\fR·\fI<int>\fR | ||
253 | Degree·of·interpolating·splines.·Currently·only·degree·=·1·is | ||
254 | supported·(int;·default:·1).·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
255 | file·is·\fBuves_obs_scired.reduce.backsub.sdegree\fR·[default·=·\fI1\fR]. | ||
256 | .TP | ||
257 | \fB\-\-reduce.backsub.smoothx\fR·\fI<float>\fR | ||
258 | If·spline·interpolation·is·used·to·measure·the·background,·the | ||
259 | x\-radius·of·the·post\-smoothing·window·is·(smoothx·*·image_width). | ||
260 | Here,·\'image_width\'·is·the·image·width·after·binning.·If·negative,·the | ||
261 | default·values·are·used:·(25.0/4096)·for·blue·flat\-field·frames, | ||
262 | (50.0/4096)·for·red·flat\-field·frames,·(300.0/4096)·for·blue·science | ||
263 | frames·and·(300.0/4096)·for·red·science·frames.·(float;·default:·\-1.0).·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
264 | file·is·\fBuves_obs_scired.reduce.backsub.smoothx\fR·[default·=·\fI\-1.0\fR]. | ||
265 | .TP | ||
266 | \fB\-\-reduce.backsub.smoothy\fR·\fI<float>\fR | ||
267 | If·spline·interpolation·is·used·to·measure·the·background,·the | ||
268 | y\-radius·of·the·post\-smoothing·window·is·(smoothy·*·image_height). | ||
269 | Here,·\'image_height\'·is·the·image·height·after·binning.·If·negative, | ||
270 | the·default·values·are·used:·(100.0/2048)·for·blue·flat\-field·frames, | ||
271 | (300.0/2048)·for·red·flat\-field·frames,·(200.0/2048)·for·blue·science | ||
272 | frames·and·(500.0/2048)·for·red·science·frames.·(float;·default:·\-1.0).·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
273 | file·is·\fBuves_obs_scired.reduce.backsub.smoothy\fR·[default·=·\fI\-1.0\fR]. | ||
274 | .PP | 274 | .PP |
275 | Note·that·it·is·possible·to·create·a·configuration·file·containing·these | 275 | Note·that·it·is·possible·to·create·a·configuration·file·containing·these |
276 | options,·along·with·suitable·default·values.·Please·refer·to·the·details | 276 | options,·along·with·suitable·default·values.·Please·refer·to·the·details |
277 | provided·by·the·'esorex·\-\-help'·command. | 277 | provided·by·the·'esorex·\-\-help'·command. |
278 | .SH·SEE·ALSO | 278 | .SH·SEE·ALSO |