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1 ·e054264910bf08ed1feaf189b2f71e09·20020·contrib/science·optional·cpl-plugin-uves-calib_5.9.1+dfsg-1_all.deb1 ·e054264910bf08ed1feaf189b2f71e09·20020·contrib/science·optional·cpl-plugin-uves-calib_5.9.1+dfsg-1_all.deb
2 ·69a2725d03c61a73e4382406c3cdbd69·1976116·debug·optional·cpl-plugin-uves-dbgsym_5.9.1+dfsg-1_i386.deb2 ·69a2725d03c61a73e4382406c3cdbd69·1976116·debug·optional·cpl-plugin-uves-dbgsym_5.9.1+dfsg-1_i386.deb
3 ·4504f0414ceba5c3fa28f96be6fe005d·183028·doc·optional·cpl-plugin-uves-doc_5.9.1+dfsg-1_all.deb3 ·28341cec6966ae6fc5b202783cf4f5b8·182324·doc·optional·cpl-plugin-uves-doc_5.9.1+dfsg-1_all.deb
4 ·a7838523df0f2acc3258dd63dbc3ae9e·954184·science·optional·cpl-plugin-uves_5.9.1+dfsg-1_i386.deb4 ·a7838523df0f2acc3258dd63dbc3ae9e·954184·science·optional·cpl-plugin-uves_5.9.1+dfsg-1_i386.deb
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1 -rw-r--r--···0········0········0········4·2018-04-27·13:52:31.000000·debian-binary1 -rw-r--r--···0········0········0········4·2018-04-27·13:52:31.000000·debian-binary
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1 Package:·cpl-plugin-uves-doc1 Package:·cpl-plugin-uves-doc
2 Source:·cpl-plugin-uves2 Source:·cpl-plugin-uves
3 Version:·5.9.1+dfsg-13 Version:·5.9.1+dfsg-1
4 Architecture:·all4 Architecture:·all
5 Maintainer:·Debian·Astronomy·Maintainers·<debian-astro-maintainers@lists.alioth.debian.org>5 Maintainer:·Debian·Astronomy·Maintainers·<debian-astro-maintainers@lists.alioth.debian.org>
6 Installed-Size:·13946 Installed-Size:·1393
7 Section:·doc7 Section:·doc
8 Priority:·optional8 Priority:·optional
9 Multi-Arch:·foreign9 Multi-Arch:·foreign
10 Homepage:·https://www.eso.org/sci/software/pipelines/uves10 Homepage:·https://www.eso.org/sci/software/pipelines/uves
11 Description:·ESO·data·reduction·pipeline·documentation·for·UVES11 Description:·ESO·data·reduction·pipeline·documentation·for·UVES
12 ·This·package·contains·the·HTML·documentation·and·manpages·for·the·data12 ·This·package·contains·the·HTML·documentation·and·manpages·for·the·data
13 ·reduction·pipeline·for·the·UVES·instrument·of·the·Very·Large·Telescope13 ·reduction·pipeline·for·the·UVES·instrument·of·the·Very·Large·Telescope
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84 -rw-r--r--···0·root·········(0)·root·········(0)······777·2018-04-27·13:52:31.000000·./usr/share/doc-base/cpl-plugin-uves84 -rw-r--r--···0·root·········(0)·root·········(0)······777·2018-04-27·13:52:31.000000·./usr/share/doc-base/cpl-plugin-uves
85 drwxr-xr-x···0·root·········(0)·root·········(0)········0·2018-04-27·13:52:31.000000·./usr/share/man/85 drwxr-xr-x···0·root·········(0)·root·········(0)········0·2018-04-27·13:52:31.000000·./usr/share/man/
86 drwxr-xr-x···0·root·········(0)·root·········(0)········0·2018-04-27·13:52:31.000000·./usr/share/man/man7/86 drwxr-xr-x···0·root·········(0)·root·········(0)········0·2018-04-27·13:52:31.000000·./usr/share/man/man7/
87 -rw-r--r--···0·root·········(0)·root·········(0)·····2906·2018-04-27·13:52:31.000000·./usr/share/man/man7/flames_cal_mkmaster.7.gz87 -rw-r--r--···0·root·········(0)·root·········(0)·····2906·2018-04-27·13:52:31.000000·./usr/share/man/man7/flames_cal_mkmaster.7.gz
88 -rw-r--r--···0·root·········(0)·root·········(0)·····3717·2018-04-27·13:52:31.000000·./usr/share/man/man7/flames_cal_orderpos.7.gz88 -rw-r--r--···0·root·········(0)·root·········(0)·····3717·2018-04-27·13:52:31.000000·./usr/share/man/man7/flames_cal_orderpos.7.gz
89 -rw-r--r--···0·root·········(0)·root·········(0)·····2544·2018-04-27·13:52:31.000000·./usr/share/man/man7/flames_cal_predict.7.gz89 -rw-r--r--···0·root·········(0)·root·········(0)·····2544·2018-04-27·13:52:31.000000·./usr/share/man/man7/flames_cal_predict.7.gz
90 -rw-r--r--···0·root·········(0)·root·········(0)·····2639·2018-04-27·13:52:31.000000·./usr/share/man/man7/flames_cal_prep_sff_ofpos.7.gz90 -rw-r--r--···0·root·········(0)·root·········(0)·····2639·2018-04-27·13:52:31.000000·./usr/share/man/man7/flames_cal_prep_sff_ofpos.7.gz
91 -rw-r--r--···0·root·········(0)·root·········(0)·····5396·2018-04-27·13:52:31.000000·./usr/share/man/man7/flames_cal_wavecal.7.gz91 -rw-r--r--···0·root·········(0)·root·········(0)·····5400·2018-04-27·13:52:31.000000·./usr/share/man/man7/flames_cal_wavecal.7.gz
92 -rw-r--r--···0·root·········(0)·root·········(0)·····8840·2018-04-27·13:52:31.000000·./usr/share/man/man7/flames_obs_redchain.7.gz92 -rw-r--r--···0·root·········(0)·root·········(0)·····8833·2018-04-27·13:52:31.000000·./usr/share/man/man7/flames_obs_redchain.7.gz
93 -rw-r--r--···0·root·········(0)·root·········(0)·····3475·2018-04-27·13:52:31.000000·./usr/share/man/man7/flames_obs_scired.7.gz93 -rw-r--r--···0·root·········(0)·root·········(0)·····3475·2018-04-27·13:52:31.000000·./usr/share/man/man7/flames_obs_scired.7.gz
94 -rw-r--r--···0·root·········(0)·root·········(0)·····1350·2018-04-27·13:52:31.000000·./usr/share/man/man7/flames_utl_unpack.7.gz94 -rw-r--r--···0·root·········(0)·root·········(0)·····1350·2018-04-27·13:52:31.000000·./usr/share/man/man7/flames_utl_unpack.7.gz
95 -rw-r--r--···0·root·········(0)·root·········(0)·····2297·2018-04-27·13:52:31.000000·./usr/share/man/man7/uves_cal_cd_align.7.gz95 -rw-r--r--···0·root·········(0)·root·········(0)·····2297·2018-04-27·13:52:31.000000·./usr/share/man/man7/uves_cal_cd_align.7.gz
96 -rw-r--r--···0·root·········(0)·root·········(0)·····2263·2018-04-27·13:52:31.000000·./usr/share/man/man7/uves_cal_mbias.7.gz96 -rw-r--r--···0·root·········(0)·root·········(0)·····2263·2018-04-27·13:52:31.000000·./usr/share/man/man7/uves_cal_mbias.7.gz
97 -rw-r--r--···0·root·········(0)·root·········(0)·····2462·2018-04-27·13:52:31.000000·./usr/share/man/man7/uves_cal_mdark.7.gz97 -rw-r--r--···0·root·········(0)·root·········(0)·····2462·2018-04-27·13:52:31.000000·./usr/share/man/man7/uves_cal_mdark.7.gz
98 -rw-r--r--···0·root·········(0)·root·········(0)·····2847·2018-04-27·13:52:31.000000·./usr/share/man/man7/uves_cal_mflat.7.gz98 -rw-r--r--···0·root·········(0)·root·········(0)·····2847·2018-04-27·13:52:31.000000·./usr/share/man/man7/uves_cal_mflat.7.gz
99 -rw-r--r--···0·root·········(0)·root·········(0)·····1962·2018-04-27·13:52:31.000000·./usr/share/man/man7/uves_cal_mflat_combine.7.gz99 -rw-r--r--···0·root·········(0)·root·········(0)·····1962·2018-04-27·13:52:31.000000·./usr/share/man/man7/uves_cal_mflat_combine.7.gz
100 -rw-r--r--···0·root·········(0)·root·········(0)·····3039·2018-04-27·13:52:31.000000·./usr/share/man/man7/uves_cal_mkmaster.7.gz100 -rw-r--r--···0·root·········(0)·root·········(0)·····3039·2018-04-27·13:52:31.000000·./usr/share/man/man7/uves_cal_mkmaster.7.gz
101 -rw-r--r--···0·root·········(0)·root·········(0)·····3760·2018-04-27·13:52:31.000000·./usr/share/man/man7/uves_cal_orderpos.7.gz101 -rw-r--r--···0·root·········(0)·root·········(0)·····3760·2018-04-27·13:52:31.000000·./usr/share/man/man7/uves_cal_orderpos.7.gz
102 -rw-r--r--···0·root·········(0)·root·········(0)·····2509·2018-04-27·13:52:31.000000·./usr/share/man/man7/uves_cal_predict.7.gz102 -rw-r--r--···0·root·········(0)·root·········(0)·····2509·2018-04-27·13:52:31.000000·./usr/share/man/man7/uves_cal_predict.7.gz
103 -rw-r--r--···0·root·········(0)·root·········(0)·····5478·2018-04-27·13:52:31.000000·./usr/share/man/man7/uves_cal_response.7.gz103 -rw-r--r--···0·root·········(0)·root·········(0)·····5480·2018-04-27·13:52:31.000000·./usr/share/man/man7/uves_cal_response.7.gz
104 -rw-r--r--···0·root·········(0)·root·········(0)·····5111·2018-04-27·13:52:31.000000·./usr/share/man/man7/uves_cal_tflat.7.gz104 -rw-r--r--···0·root·········(0)·root·········(0)·····5088·2018-04-27·13:52:31.000000·./usr/share/man/man7/uves_cal_tflat.7.gz
105 -rw-r--r--···0·root·········(0)·root·········(0)·····5433·2018-04-27·13:52:31.000000·./usr/share/man/man7/uves_cal_wavecal.7.gz105 -rw-r--r--···0·root·········(0)·root·········(0)·····5436·2018-04-27·13:52:31.000000·./usr/share/man/man7/uves_cal_wavecal.7.gz
106 -rw-r--r--···0·root·········(0)·root·········(0)·····9713·2018-04-27·13:52:31.000000·./usr/share/man/man7/uves_obs_redchain.7.gz106 -rw-r--r--···0·root·········(0)·root·········(0)·····9093·2018-04-27·13:52:31.000000·./usr/share/man/man7/uves_obs_redchain.7.gz
107 -rw-r--r--···0·root·········(0)·root·········(0)·····5533·2018-04-27·13:52:31.000000·./usr/share/man/man7/uves_obs_scired.7.gz107 -rw-r--r--···0·root·········(0)·root·········(0)·····5527·2018-04-27·13:52:31.000000·./usr/share/man/man7/uves_obs_scired.7.gz
108 -rw-r--r--···0·root·········(0)·root·········(0)·····1595·2018-04-27·13:52:31.000000·./usr/share/man/man7/uves_utl_ima_arith.7.gz108 -rw-r--r--···0·root·········(0)·root·········(0)·····1595·2018-04-27·13:52:31.000000·./usr/share/man/man7/uves_utl_ima_arith.7.gz
109 -rw-r--r--···0·root·········(0)·root·········(0)·····1681·2018-04-27·13:52:31.000000·./usr/share/man/man7/uves_utl_remove_crh_single.7.gz109 -rw-r--r--···0·root·········(0)·root·········(0)·····1681·2018-04-27·13:52:31.000000·./usr/share/man/man7/uves_utl_remove_crh_single.7.gz
110 lrwxrwxrwx···0·root·········(0)·root·········(0)········0·2018-04-27·13:52:31.000000·./usr/share/doc/cpl-plugin-uves/html/_static/doctools.js·->·../../../../javascript/sphinxdoc/1.0/doctools.js110 lrwxrwxrwx···0·root·········(0)·root·········(0)········0·2018-04-27·13:52:31.000000·./usr/share/doc/cpl-plugin-uves/html/_static/doctools.js·->·../../../../javascript/sphinxdoc/1.0/doctools.js
111 lrwxrwxrwx···0·root·········(0)·root·········(0)········0·2018-04-27·13:52:31.000000·./usr/share/doc/cpl-plugin-uves/html/_static/jquery.js·->·../../../../javascript/sphinxdoc/1.0/jquery.js111 lrwxrwxrwx···0·root·········(0)·root·········(0)········0·2018-04-27·13:52:31.000000·./usr/share/doc/cpl-plugin-uves/html/_static/jquery.js·->·../../../../javascript/sphinxdoc/1.0/jquery.js
112 lrwxrwxrwx···0·root·········(0)·root·········(0)········0·2018-04-27·13:52:31.000000·./usr/share/doc/cpl-plugin-uves/html/_static/searchtools.js·->·../../../../javascript/sphinxdoc/1.0/searchtools.js112 lrwxrwxrwx···0·root·········(0)·root·········(0)········0·2018-04-27·13:52:31.000000·./usr/share/doc/cpl-plugin-uves/html/_static/searchtools.js·->·../../../../javascript/sphinxdoc/1.0/searchtools.js
113 lrwxrwxrwx···0·root·········(0)·root·········(0)········0·2018-04-27·13:52:31.000000·./usr/share/doc/cpl-plugin-uves/html/_static/underscore.js·->·../../../../javascript/sphinxdoc/1.0/underscore.js113 lrwxrwxrwx···0·root·········(0)·root·········(0)········0·2018-04-27·13:52:31.000000·./usr/share/doc/cpl-plugin-uves/html/_static/underscore.js·->·../../../../javascript/sphinxdoc/1.0/underscore.js
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62 ····Whether·or·not·to·save·intermediate·results·to·local·directory·(bool;··default:·False)·[default=False].62 ····Whether·or·not·to·save·intermediate·results·to·local·directory·(bool;··default:·False)·[default=False].
63 ..·py:attribute::·flames_obs_redchain.param.plotter63 ..·py:attribute::·flames_obs_redchain.param.plotter
  
64 ····Any·plots·produced·by·the·recipe·are·redirected·to·the·command··specified·by·this·parameter.·The·plotting·command·must·contain·the··substring·'gnuplot'·and·must·be·able·to·parse·gnuplot·syntax·on·its··standard·input.·Valid·examples·of·such·a·command·may·include·'gnuplot··-persist'·and·'cat·>·mygnuplot$$.gp'.·A·finer·control·of·the·plotting··options·can·be·obtained·by·writing·an·executable·script,·e.g.··my_gnuplot.pl,·that·executes·gnuplot·after·setting·the·desired·gnuplot··options·(e.g.·set·terminal·pslatex·color).·To·turn·off·plotting,·set··this·parameter·to·'no'·(str;·default:·'no')·[default="no"].64 ····Any·plots·produced·by·the·recipe·are·redirected·to·the·command··specified·by·this·parameter.·The·plotting·command·must·contain·the··substring·'gnuplot'·and·must·be·able·to·parse·gnuplot·syntax·on·its··standard·input.·Valid·examples·of·such·a·command·may·include·'gnuplot··-persist'·and·'cat·>·mygnuplot$$.gp'.·A·finer·control·of·the·plotting··options·can·be·obtained·by·writing·an·executable·script,·e.g.··my_gnuplot.pl,·that·executes·gnuplot·after·setting·the·desired·gnuplot··options·(e.g.·set·terminal·pslatex·color).·To·turn·off·plotting,·set··this·parameter·to·'no'·(str;·default:·'no')·[default="no"].
65 ..·py:attribute::·flames_obs_redchain.param.process_chip65 ..·py:attribute::·flames_obs_redchain.param.process_chip
  
66 ····For·RED·arm·data·process·the·redl,·redu,·or·both·chip(s)·(str;··default:·'both')·[default="both"].66 ····For·RED·arm·data·process·the·redl,·redu,·or·both·chip(s)·(str;··default:·'both')·[default="both"].
 67 ..·py:attribute::·flames_obs_redchain.param.flames_cal_orderpos.use_guess_tab
  
 68 ····If·a·Guess·order·table·is·provided·this·parameter·set·how·it·is··used:0:·No·usage,·1:·use·it·to·set·lower/upper·Y·raws·where·order·are··searched·2:·the·order·table·try·to·fully·match·the·guess·(int;··default:·1)·[default=1].
 69 ..·py:attribute::·flames_obs_redchain.param.flames_cal_orderpos.radx
  
 70 ····Half·X·size·of·median·filtering·window·(int;·default:·2)·[default=2].
 71 ..·py:attribute::·flames_obs_redchain.param.flames_cal_orderpos.rady
  
 72 ····Half·Y·size·of·median·filtering·window·(int;·default:·1)·[default=1].
 73 ..·py:attribute::·flames_obs_redchain.param.flames_cal_orderpos.mmethod
  
 74 ····Background·subtraction·method.·If·equal·to·'median'·the·background·is··sampled·using·the·median·of·a·sub-window.·If·'minimum',·the·minimum··sub-window·value·is·used.·If·'no',·no·background·subtraction·is·done.··(str;·default:·'median')·[default="median"].
 75 ..·py:attribute::·flames_obs_redchain.param.flames_cal_orderpos.backsubgrid
  
 76 ····Number·of·grid·points·(in·x-·and·y-direction)·used·to·estimate·the··background·(mode=poly).·(int;·default:·50)·[default=50].
 77 ..·py:attribute::·flames_obs_redchain.param.flames_cal_orderpos.backsubradiusy
  
 78 ····The·height·(in·pixels)·of·the·background·sampling·window·is·(2*radiusy··+·1).·This·parameter·is·not·corrected·for·binning.·(int;·default:·2)·[default=2].
 79 ..·py:attribute::·flames_obs_redchain.param.flames_cal_orderpos.backsubkappa
  
 80 ····The·value·of·kappa·in·the·one-sided·kappa-sigma·clipping·used·to··estimate·the·background·(mode=poly).·(float;·default:·4.0)·[default=4.0].
 81 ..·py:attribute::·flames_obs_redchain.param.flames_cal_orderpos.backsubdegx
  
 82 ····Degree·(in·x)·of·polynomial·used·to·estimate·the·background··(mode=poly).·(int;·default:·2)·[default=2].
 83 ..·py:attribute::·flames_obs_redchain.param.flames_cal_orderpos.backsubdegy
  
 84 ····Degree·(in·y)·of·polynomial·used·to·estimate·the·background··(mode=poly).·(int;·default:·2)·[default=2].
 85 ..·py:attribute::·flames_obs_redchain.param.flames_cal_orderpos.samplewidth
  
 86 ····Separation·of·sample·traces·(used·by·Hough·transform)·in·input·image··(int;·default:·50)·[default=50].
 87 ..·py:attribute::·flames_obs_redchain.param.flames_cal_orderpos.minslope
  
 88 ····Minimum·possible·line·slope.·This·should·be·the·'physical'·slope·on··the·chip,·i.e.·not·taking·binning·factors·into·account,·which·is··handled·by·the·recipe·(float;·default:·0.0)·[default=0.0].
 89 ..·py:attribute::·flames_obs_redchain.param.flames_cal_orderpos.maxslope
  
 90 ····Maximum·possible·line·slope·(float;·default:·0.2)·[default=0.2].
 91 ..·py:attribute::·flames_obs_redchain.param.flames_cal_orderpos.sloperes
  
 92 ····Resolution·(width·in·pixels)·of·Hough·space·(int;·default:·120)·[default=120].
 93 ..·py:attribute::·flames_obs_redchain.param.flames_cal_orderpos.pthres
  
 94 ····In·automatic·mode,·or·if·the·number·of·orders·to·detect·is·read·from·a··guess·table,·the·detection·of·new·lines·stops·when·the·intensity·of·a··candidate·line·drops·to·less·than·'pthres'·times·the·intensity·of·the··previous·detection.··(float;·default:·0.2)·[default=0.2].
 95 ..·py:attribute::·flames_obs_redchain.param.flames_cal_orderpos.tracestep
  
 96 ····The·step·size·used·when·tracing·the·orders·(int;·default:·10)·[default=10].
 97 ..·py:attribute::·flames_obs_redchain.param.flames_cal_orderpos.minthresh
  
 98 ····The·minimum·threshold·value·is·(min·+·minthres*(max·-·min)).·Here··'min'·and·'max'·are·the·lowest·and·highest·pixel·values·in·the·central··bin·of·the·order·(float;·default:·0.2)·[default=0.2].
 99 ..·py:attribute::·flames_obs_redchain.param.flames_cal_orderpos.maxgap
  
 100 ····If·the·order·line·drops·below·detection·threshold,·the·order·tracing··algorithm·will·try·to·jump·a·gap·of·maximum·size·'maxgap'·multiplied··by·the·image·width·(float;·default:·0.2)·[default=0.2].
 101 ..·py:attribute::·flames_obs_redchain.param.flames_cal_orderpos.maxrms
  
 102 ····When·fitting·the·orders·with·straight·lines,·this·is·the·maximum··allowed·RMS·relative·to·the·median·RMS·of·all·orders·(float;·default:··100.0)·[default=100.0].
 103 ..·py:attribute::·flames_obs_redchain.param.flames_cal_orderpos.defpol1
  
 104 ····The·degree·of·the·bivarite·fit·(cross·dispersion·direction).·If··negative,·the·degree·is·optimized·to·give·the·best·fit·(int;·default:··-1)·[default=-1].
 105 ..·py:attribute::·flames_obs_redchain.param.flames_cal_orderpos.defpol2
  
 106 ····The·degree·of·the·bivarite·fit·(order·number).·If·negative,·the·degree··is·optimized·to·give·the·best·fit·(int;·default:·-1)·[default=-1].
 107 ..·py:attribute::·flames_obs_redchain.param.flames_cal_orderpos.kappa
  
 108 ····Used·for·kappa-sigma·clipping·of·the·final·polynomial·fit.·If··negative,·no·clipping·is·done·(float;·default:·4.0)·[default=4.0].
 109 ..·py:attribute::·flames_obs_redchain.param.uves_cal_mflat.norm_method
  
 110 ····Method·used·to·build·master·frame··(str;·default:·'explevel')·[default="explevel"].
 111 ..·py:attribute::·flames_obs_redchain.param.uves_cal_mflat.backsub.mmethod
  
 112 ····Background·measuring·method.·If·equal·to·'median'·the·background·is··sampled·using·the·median·of·a·subwindow.·If·'minimum',·the·subwindow··minimum·value·is·used.·If·'no',·no·background·subtraction·is·done.··(str;·default:·'median')·[default="median"].
 113 ..·py:attribute::·flames_obs_redchain.param.uves_cal_mflat.backsub.npoints
  
 114 ····This·is·the·number·of·columns·in·interorder·space·used·to·sample·the··background.·(int;·default:·82)·[default=82].
 115 ..·py:attribute::·flames_obs_redchain.param.uves_cal_mflat.backsub.radiusy
  
 116 ····The·height·(in·pixels)·of·the·background·sampling·window·is·(2*radiusy··+·1).·This·parameter·is·not·corrected·for·binning.·(int;·default:·2)·[default=2].
 117 ..·py:attribute::·flames_obs_redchain.param.uves_cal_mflat.backsub.sdegree
  
 118 ····Degree·of·interpolating·splines.·Currently·only·degree·=·1·is··supported·(int;·default:·1)·[default=1].
 119 ..·py:attribute::·flames_obs_redchain.param.uves_cal_mflat.backsub.smoothx
  
 120 ····If·spline·interpolation·is·used·to·measure·the·background,·the··x-radius·of·the·post-smoothing·window·is·(smoothx·*·image_width).··Here,·'image_width'·is·the·image·width·after·binning.·If·negative,·the··default·values·are·used:·(25.0/4096)·for·blue·flat-field·frames,··(50.0/4096)·for·red·flat-field·frames,·(300.0/4096)·for·blue·science··frames·and·(300.0/4096)·for·red·science·frames.·(float;·default:·-1.0)·[default=-1.0].
 121 ..·py:attribute::·flames_obs_redchain.param.uves_cal_mflat.backsub.smoothy
  
 122 ····If·spline·interpolation·is·used·to·measure·the·background,·the··y-radius·of·the·post-smoothing·window·is·(smoothy·*·image_height).··Here,·'image_height'·is·the·image·height·after·binning.·If·negative,··the·default·values·are·used:·(100.0/2048)·for·blue·flat-field·frames,··(300.0/2048)·for·red·flat-field·frames,·(200.0/2048)·for·blue·science··frames·and·(500.0/2048)·for·red·science·frames.·(float;·default:·-1.0)·[default=-1.0].
67 ..·py:attribute::·flames_obs_redchain.param.flames_cal_prep_sff_ofpos.ext_method123 ..·py:attribute::·flames_obs_redchain.param.flames_cal_prep_sff_ofpos.ext_method
  
68 ····Extraction·method·(str;·default:·'opt')·[default="opt"].124 ····Extraction·method·(str;·default:·'opt')·[default="opt"].
69 ..·py:attribute::·flames_obs_redchain.param.flames_cal_prep_sff_ofpos.bias_method125 ..·py:attribute::·flames_obs_redchain.param.flames_cal_prep_sff_ofpos.bias_method
  
70 ····Bias·subtraction·method,·M·for·master·bias·frame,·N·for·no·bias··subtraction,·V·to·subtract·a·constant·bias·level·defined·by·the··parameter·bias_value·(str;·default:·'M')·[default="M"].126 ····Bias·subtraction·method,·M·for·master·bias·frame,·N·for·no·bias··subtraction,·V·to·subtract·a·constant·bias·level·defined·by·the··parameter·bias_value·(str;·default:·'M')·[default="M"].
71 ..·py:attribute::·flames_obs_redchain.param.flames_cal_prep_sff_ofpos.bias_value127 ..·py:attribute::·flames_obs_redchain.param.flames_cal_prep_sff_ofpos.bias_value
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158 ····In·optimal·extraction·mode,·the·sky·subtraction·method·to·use.··'median'·estimates·the·sky·as·the·median·of·pixels·along·the·slit··(ignoring·pixels·close·to·the·object),·whereas·'optimal'·does·a·chi··square·minimization·along·the·slit·to·obtain·the·best·combined·object··and·sky·levels.·The·optimal·method·gives·the·most·accurate·sky··determination·but·is·also·a·bit·slower·than·the·median·method·(str;··default:·'optimal')·[default="optimal"].242 ····In·optimal·extraction·mode,·the·sky·subtraction·method·to·use.··'median'·estimates·the·sky·as·the·median·of·pixels·along·the·slit··(ignoring·pixels·close·to·the·object),·whereas·'optimal'·does·a·chi··square·minimization·along·the·slit·to·obtain·the·best·combined·object··and·sky·levels.·The·optimal·method·gives·the·most·accurate·sky··determination·but·is·also·a·bit·slower·than·the·median·method·(str;··default:·'optimal')·[default="optimal"].
159 ..·py:attribute::·flames_obs_redchain.param.flames_cal_wavecal.extract.oversample243 ..·py:attribute::·flames_obs_redchain.param.flames_cal_wavecal.extract.oversample
  
160 ····The·oversampling·factor·used·for·the·virtual·resampling·algorithm.·If··negative,·the·value·5·is·used·for·S/N·<=200,·and·the·value·10·is·used··if·the·estimated·S/N·is·>·200·(int;·default:·-1)·[default=-1].244 ····The·oversampling·factor·used·for·the·virtual·resampling·algorithm.·If··negative,·the·value·5·is·used·for·S/N·<=200,·and·the·value·10·is·used··if·the·estimated·S/N·is·>·200·(int;·default:·-1)·[default=-1].
161 ..·py:attribute::·flames_obs_redchain.param.flames_cal_wavecal.extract.best245 ..·py:attribute::·flames_obs_redchain.param.flames_cal_wavecal.extract.best
  
162 ····(optimal·extraction·only)·If·false·(fastest),·the·spectrum·is··extracted·only·once.·If·true·(best),·the·spectrum·is·extracted·twice,··the·second·time·using·improved·variance·estimates·based·on·the·first··iteration.·Better·variance·estimates·slightly·improve·the·obtained··signal·to·noise·but·at·the·cost·of·increased·execution·time·(bool;··default:·True)·[default=True].246 ····(optimal·extraction·only)·If·false·(fastest),·the·spectrum·is··extracted·only·once.·If·true·(best),·the·spectrum·is·extracted·twice,··the·second·time·using·improved·variance·estimates·based·on·the·first··iteration.·Better·variance·estimates·slightly·improve·the·obtained··signal·to·noise·but·at·the·cost·of·increased·execution·time·(bool;··default:·True)·[default=True].
163 ..·py:attribute::·flames_obs_redchain.param.uves_cal_mbias.clean_traps 
  
164 ····Clean·detector·traps.·If·TRUE·detector·traps·are·interpolated.The·bad··pixels·are·replaced·by·the·average·of·thenearest·good·pixels·in·the··same·column,·or·simply·marked·as·bad.·The·positions·of·bad·pixels·are··hard-coded·(as·function·of·UVES·chip).·(bool;·default:·False)·[default=False]. 
165 ..·py:attribute::·flames_obs_redchain.param.uves_cal_mbias.stack_method 
  
166 ····Method·used·to·build·master·frame··(str;·default:·'median')·[default="median"]. 
167 ..·py:attribute::·flames_obs_redchain.param.uves_cal_mbias.klow 
  
168 ····Kappa·used·to·clip·low·level·values,·when·method·is·set·to·'mean'··(float;·default:·5.0)·[default=5.0]. 
169 ..·py:attribute::·flames_obs_redchain.param.uves_cal_mbias.khigh 
  
170 ····Kappa·used·to·clip·high·level·values,·when·method·is·set·to·'mean'··(float;·default:·5.0)·[default=5.0]. 
171 ..·py:attribute::·flames_obs_redchain.param.uves_cal_mbias.niter 
  
172 ····Number·of·kappa·sigma·iterations,·when·method·is·set·to·'mean'··(int;··default:·5)·[default=5]. 
173 ..·py:attribute::·flames_obs_redchain.param.uves_cal_mdark.stack_method 
  
174 ····Method·used·to·build·master·frame··(str;·default:·'median')·[default="median"]. 
175 ..·py:attribute::·flames_obs_redchain.param.uves_cal_mdark.klow 
  
176 ····Kappa·used·to·clip·low·level·values,·when·method·is·set·to·'mean'··(float;·default:·5.0)·[default=5.0]. 
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75 ····For·RED·arm·data·process·the·redl,·redu,·or·both·chip(s)·(str;··default:·'both')·[default="both"].75 ····For·RED·arm·data·process·the·redl,·redu,·or·both·chip(s)·(str;··default:·'both')·[default="both"].
76 ..·py:attribute::·uves_cal_mkmaster.param.clean_traps76 ..·py:attribute::·uves_cal_mkmaster.param.clean_traps
  
77 ····Clean·detector·traps.·If·TRUE·detector·traps·are·interpolated.The·bad··pixels·are·replaced·by·the·average·of·thenearest·good·pixels·in·the··same·column,·or·simply·marked·as·bad.·The·positions·of·bad·pixels·are··hard-coded·(as·function·of·UVES·chip).·(bool;·default:·False)·[default=False].77 ····Clean·detector·traps.·If·TRUE·detector·traps·are·interpolated.The·bad··pixels·are·replaced·by·the·average·of·thenearest·good·pixels·in·the··same·column,·or·simply·marked·as·bad.·The·positions·of·bad·pixels·are··hard-coded·(as·function·of·UVES·chip).·(bool;·default:·False)·[default=False].
78 ..·py:attribute::·uves_cal_mkmaster.param.norm_method78 ..·py:attribute::·uves_cal_mkmaster.param.norm_method
  
79 ····Method·used·to·build·master·frame··(str;·default:·'explevel')·[default="explevel"].79 ····Method·used·to·build·master·frame··(str;·default:·'explevel')·[default="explevel"].
80 ..·py:attribute::·uves_cal_mkmaster.param.backsub.mmethod 
  
81 ····Background·measuring·method.·If·equal·to·'median'·the·background·is··sampled·using·the·median·of·a·subwindow.·If·'minimum',·the·subwindow··minimum·value·is·used.·If·'no',·no·background·subtraction·is·done.··(str;·default:·'median')·[default="median"]. 
82 ..·py:attribute::·uves_cal_mkmaster.param.backsub.npoints 
  
83 ····This·is·the·number·of·columns·in·interorder·space·used·to·sample·the··background.·(int;·default:·82)·[default=82]. 
84 ..·py:attribute::·uves_cal_mkmaster.param.backsub.radiusy 
  
85 ····The·height·(in·pixels)·of·the·background·sampling·window·is·(2*radiusy··+·1).·This·parameter·is·not·corrected·for·binning.·(int;·default:·2)·[default=2]. 
86 ..·py:attribute::·uves_cal_mkmaster.param.backsub.sdegree 
  
87 ····Degree·of·interpolating·splines.·Currently·only·degree·=·1·is··supported·(int;·default:·1)·[default=1]. 
88 ..·py:attribute::·uves_cal_mkmaster.param.backsub.smoothx 
  
89 ····If·spline·interpolation·is·used·to·measure·the·background,·the··x-radius·of·the·post-smoothing·window·is·(smoothx·*·image_width).··Here,·'image_width'·is·the·image·width·after·binning.·If·negative,·the··default·values·are·used:·(25.0/4096)·for·blue·flat-field·frames,··(50.0/4096)·for·red·flat-field·frames,·(300.0/4096)·for·blue·science··frames·and·(300.0/4096)·for·red·science·frames.·(float;·default:·-1.0)·[default=-1.0]. 
90 ..·py:attribute::·uves_cal_mkmaster.param.backsub.smoothy 
  
91 ····If·spline·interpolation·is·used·to·measure·the·background,·the··y-radius·of·the·post-smoothing·window·is·(smoothy·*·image_height).··Here,·'image_height'·is·the·image·height·after·binning.·If·negative,··the·default·values·are·used:·(100.0/2048)·for·blue·flat-field·frames,··(300.0/2048)·for·red·flat-field·frames,·(200.0/2048)·for·blue·science··frames·and·(500.0/2048)·for·red·science·frames.·(float;·default:·-1.0)·[default=-1.0]. 
92 ..·py:attribute::·uves_cal_mkmaster.param.qc_dark.reg.num_x80 ..·py:attribute::·uves_cal_mkmaster.param.qc_dark.reg.num_x
  
93 ····Number·of·regions·along·the·X·axis·(where·mean/med/rms·are·computed).··(int;·default:·4)·[default=4].81 ····Number·of·regions·along·the·X·axis·(where·mean/med/rms·are·computed).··(int;·default:·4)·[default=4].
94 ..·py:attribute::·uves_cal_mkmaster.param.qc_dark.reg.num_y82 ..·py:attribute::·uves_cal_mkmaster.param.qc_dark.reg.num_y
  
95 ····Number·of·regions·along·the·Y·axis(where·mean/med/rms·are·computed).··(int;·default:·4)·[default=4].83 ····Number·of·regions·along·the·Y·axis(where·mean/med/rms·are·computed).··(int;·default:·4)·[default=4].
96 ..·py:attribute::·uves_cal_mkmaster.param.qc_dark.reg.box_sx84 ..·py:attribute::·uves_cal_mkmaster.param.qc_dark.reg.box_sx
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114 ····X·distance·between·the·left·hand·side·of·the·detector·and·the·left··hand·side·of·the·region·[pix]·(int;·default:·100)·[default=100].96 ····X·distance·between·the·left·hand·side·of·the·detector·and·the·left··hand·side·of·the·region·[pix]·(int;·default:·100)·[default=100].
115 ..·py:attribute::·uves_cal_mkmaster.param.qc_dark.reg.border_y97 ..·py:attribute::·uves_cal_mkmaster.param.qc_dark.reg.border_y
  
116 ····X·distance·between·the·left·hand·side·of·the·detector·and·the·left··hand·side·of·the·region·[pix]·(int;·default:·100)·[default=100].98 ····X·distance·between·the·left·hand·side·of·the·detector·and·the·left··hand·side·of·the·region·[pix]·(int;·default:·100)·[default=100].
117 ..·py:attribute::·uves_cal_mkmaster.param.qc_dark.reg.when99 ..·py:attribute::·uves_cal_mkmaster.param.qc_dark.reg.when
  
118 ····When·QC·analysis·is·performed.·0:·on·each·raw·frame·or·1:·on·the··master·frame·(int;·default:·0)·[default=0].100 ····When·QC·analysis·is·performed.·0:·on·each·raw·frame·or·1:·on·the··master·frame·(int;·default:·0)·[default=0].
 101 ..·py:attribute::·uves_cal_mkmaster.param.backsub.mmethod
  
 102 ····Background·measuring·method.·If·equal·to·'median'·the·background·is··sampled·using·the·median·of·a·subwindow.·If·'minimum',·the·subwindow··minimum·value·is·used.·If·'no',·no·background·subtraction·is·done.··(str;·default:·'median')·[default="median"].
 103 ..·py:attribute::·uves_cal_mkmaster.param.backsub.npoints
  
 104 ····This·is·the·number·of·columns·in·interorder·space·used·to·sample·the··background.·(int;·default:·82)·[default=82].
 105 ..·py:attribute::·uves_cal_mkmaster.param.backsub.radiusy
  
 106 ····The·height·(in·pixels)·of·the·background·sampling·window·is·(2*radiusy··+·1).·This·parameter·is·not·corrected·for·binning.·(int;·default:·2)·[default=2].
 107 ..·py:attribute::·uves_cal_mkmaster.param.backsub.sdegree
  
 108 ····Degree·of·interpolating·splines.·Currently·only·degree·=·1·is··supported·(int;·default:·1)·[default=1].
 109 ..·py:attribute::·uves_cal_mkmaster.param.backsub.smoothx
  
 110 ····If·spline·interpolation·is·used·to·measure·the·background,·the··x-radius·of·the·post-smoothing·window·is·(smoothx·*·image_width).··Here,·'image_width'·is·the·image·width·after·binning.·If·negative,·the··default·values·are·used:·(25.0/4096)·for·blue·flat-field·frames,··(50.0/4096)·for·red·flat-field·frames,·(300.0/4096)·for·blue·science··frames·and·(300.0/4096)·for·red·science·frames.·(float;·default:·-1.0)·[default=-1.0].
 111 ..·py:attribute::·uves_cal_mkmaster.param.backsub.smoothy
  
 112 ····If·spline·interpolation·is·used·to·measure·the·background,·the··y-radius·of·the·post-smoothing·window·is·(smoothy·*·image_height).··Here,·'image_height'·is·the·image·height·after·binning.·If·negative,··the·default·values·are·used:·(100.0/2048)·for·blue·flat-field·frames,··(300.0/2048)·for·red·flat-field·frames,·(200.0/2048)·for·blue·science··frames·and·(500.0/2048)·for·red·science·frames.·(float;·default:·-1.0)·[default=-1.0].
  
  
119 The·following·code·snippet·shows·the·default·settings·for·the·available·113 The·following·code·snippet·shows·the·default·settings·for·the·available·
120 parameters.114 parameters.
  
121 ::115 ::
  
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140 ···uves_cal_mkmaster.param.khigh·=·5.0140 ···uves_cal_mkmaster.param.khigh·=·5.0
141 ···uves_cal_mkmaster.param.niter·=·5141 ···uves_cal_mkmaster.param.niter·=·5
142 ···uves_cal_mkmaster.param.debug·=·False142 ···uves_cal_mkmaster.param.debug·=·False
143 ···uves_cal_mkmaster.param.plotter·=·"no"143 ···uves_cal_mkmaster.param.plotter·=·"no"
144 ···uves_cal_mkmaster.param.process_chip·=·"both"144 ···uves_cal_mkmaster.param.process_chip·=·"both"
145 ···uves_cal_mkmaster.param.clean_traps·=·False145 ···uves_cal_mkmaster.param.clean_traps·=·False
146 ···uves_cal_mkmaster.param.norm_method·=·"explevel"146 ···uves_cal_mkmaster.param.norm_method·=·"explevel"
147 ···uves_cal_mkmaster.param.backsub.mmethod·=·"median" 
148 ···uves_cal_mkmaster.param.backsub.npoints·=·82 
149 ···uves_cal_mkmaster.param.backsub.radiusy·=·2 
150 ···uves_cal_mkmaster.param.backsub.sdegree·=·1 
151 ···uves_cal_mkmaster.param.backsub.smoothx·=·-1.0 
152 ···uves_cal_mkmaster.param.backsub.smoothy·=·-1.0 
153 ···uves_cal_mkmaster.param.qc_dark.reg.num_x·=·4147 ···uves_cal_mkmaster.param.qc_dark.reg.num_x·=·4
154 ···uves_cal_mkmaster.param.qc_dark.reg.num_y·=·4148 ···uves_cal_mkmaster.param.qc_dark.reg.num_y·=·4
155 ···uves_cal_mkmaster.param.qc_dark.reg.box_sx·=·100149 ···uves_cal_mkmaster.param.qc_dark.reg.box_sx·=·100
156 ···uves_cal_mkmaster.param.qc_dark.reg.box_sy·=·100150 ···uves_cal_mkmaster.param.qc_dark.reg.box_sy·=·100
157 ···uves_cal_mkmaster.param.qc_dark.reg.border_x·=·100151 ···uves_cal_mkmaster.param.qc_dark.reg.border_x·=·100
158 ···uves_cal_mkmaster.param.qc_dark.reg.border_y·=·100152 ···uves_cal_mkmaster.param.qc_dark.reg.border_y·=·100
159 ···uves_cal_mkmaster.param.qc_dark.reg.when·=·0153 ···uves_cal_mkmaster.param.qc_dark.reg.when·=·0
 154 ···uves_cal_mkmaster.param.backsub.mmethod·=·"median"
 155 ···uves_cal_mkmaster.param.backsub.npoints·=·82
 156 ···uves_cal_mkmaster.param.backsub.radiusy·=·2
 157 ···uves_cal_mkmaster.param.backsub.sdegree·=·1
 158 ···uves_cal_mkmaster.param.backsub.smoothx·=·-1.0
 159 ···uves_cal_mkmaster.param.backsub.smoothy·=·-1.0
  
  
160 You·may·also·set·or·overwrite·some·or·all·parameters·by·the·recipe·160 You·may·also·set·or·overwrite·some·or·all·parameters·by·the·recipe·
161 parameter·`param`,·as·shown·in·the·following·example:161 parameter·`param`,·as·shown·in·the·following·example:
  
162 ::162 ::
  
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./usr/share/doc/cpl-plugin-uves/html/_sources/uves_obs_redchain.rst.txt
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62 ····Whether·or·not·to·save·intermediate·results·to·local·directory·(bool;··default:·False)·[default=False].62 ····Whether·or·not·to·save·intermediate·results·to·local·directory·(bool;··default:·False)·[default=False].
63 ..·py:attribute::·uves_obs_redchain.param.plotter63 ..·py:attribute::·uves_obs_redchain.param.plotter
  
64 ····Any·plots·produced·by·the·recipe·are·redirected·to·the·command··specified·by·this·parameter.·The·plotting·command·must·contain·the··substring·'gnuplot'·and·must·be·able·to·parse·gnuplot·syntax·on·its··standard·input.·Valid·examples·of·such·a·command·may·include·'gnuplot··-persist'·and·'cat·>·mygnuplot$$.gp'.·A·finer·control·of·the·plotting··options·can·be·obtained·by·writing·an·executable·script,·e.g.··my_gnuplot.pl,·that·executes·gnuplot·after·setting·the·desired·gnuplot··options·(e.g.·set·terminal·pslatex·color).·To·turn·off·plotting,·set··this·parameter·to·'no'·(str;·default:·'no')·[default="no"].64 ····Any·plots·produced·by·the·recipe·are·redirected·to·the·command··specified·by·this·parameter.·The·plotting·command·must·contain·the··substring·'gnuplot'·and·must·be·able·to·parse·gnuplot·syntax·on·its··standard·input.·Valid·examples·of·such·a·command·may·include·'gnuplot··-persist'·and·'cat·>·mygnuplot$$.gp'.·A·finer·control·of·the·plotting··options·can·be·obtained·by·writing·an·executable·script,·e.g.··my_gnuplot.pl,·that·executes·gnuplot·after·setting·the·desired·gnuplot··options·(e.g.·set·terminal·pslatex·color).·To·turn·off·plotting,·set··this·parameter·to·'no'·(str;·default:·'no')·[default="no"].
65 ..·py:attribute::·uves_obs_redchain.param.process_chip65 ..·py:attribute::·uves_obs_redchain.param.process_chip
  
66 ····For·RED·arm·data·process·the·redl,·redu,·or·both·chip(s)·(str;··default:·'both')·[default="both"].66 ····For·RED·arm·data·process·the·redl,·redu,·or·both·chip(s)·(str;··default:·'both')·[default="both"].
67 ..·py:attribute::·uves_obs_redchain.param.uves_cal_predict.mbox_x 
  
68 ····Match·box·X·size·(int;·default:·40)·[default=40]. 
69 ..·py:attribute::·uves_obs_redchain.param.uves_cal_predict.mbox_y 
  
70 ····Match·box·Y·size·(int;·default:·40)·[default=40]. 
71 ..·py:attribute::·uves_obs_redchain.param.uves_cal_predict.trans_x 
  
72 ····Detector·translation·along·X·(float;·default:·0.0)·[default=0.0]. 
73 ..·py:attribute::·uves_obs_redchain.param.uves_cal_predict.trans_y 
  
74 ····Detector·translation·along·Y·(float;·default:·0.0)·[default=0.0]. 
75 ..·py:attribute::·uves_obs_redchain.param.uves_cal_predict.ech_angle_off 
  
76 ····Offset·on·echelle·angle·(float;·default:·0.0)·[default=0.0]. 
77 ..·py:attribute::·uves_obs_redchain.param.uves_cal_predict.cd_angle_off 
  
78 ····Offset·on·cross·disperser·angle·(float;·default:·0.0)·[default=0.0]. 
79 ..·py:attribute::·uves_obs_redchain.param.uves_cal_predict.ccd_rot_angle_off 
  
80 ····Offset·on·CCD·rotation·angle·(float;·default:·0.0)·[default=0.0]. 
81 ..·py:attribute::·uves_obs_redchain.param.uves_cal_predict.compute_regression_sw 
  
82 ····Compute·regression?·(bool;·default:·True)·[default=True]. 
83 ..·py:attribute::·uves_obs_redchain.param.uves_cal_predict.def_pol1 
  
84 ····Polynomial·X·deg·(int;·default:·4)·[default=4]. 
85 ..·py:attribute::·uves_obs_redchain.param.uves_cal_predict.def_pol2 
  
86 ····Polynomial·Y·deg·(int;·default:·5)·[default=5]. 
87 ..·py:attribute::·uves_obs_redchain.param.uves_cal_predict.kappa 
  
88 ····Kappa·value·in·kappa·sigma·clipping·on·RESIDUAL·between·YFIT·and·Y··columns·(float;·default:·4.5)·[default=4.5]. 
89 ..·py:attribute::·uves_obs_redchain.param.uves_cal_predict.tol 
  
90 ····Tolerance·in·kappa·sigma·clipping·on·RESIDUAL·between·YFIT·and·Y··columns·(float;·default:·2.0)·[default=2.0]. 
91 ..·py:attribute::·uves_obs_redchain.param.uves_cal_mbias.clean_traps 
  
92 ····Clean·detector·traps.·If·TRUE·detector·traps·are·interpolated.The·bad··pixels·are·replaced·by·the·average·of·thenearest·good·pixels·in·the··same·column,·or·simply·marked·as·bad.·The·positions·of·bad·pixels·are··hard-coded·(as·function·of·UVES·chip).·(bool;·default:·False)·[default=False]. 
93 ..·py:attribute::·uves_obs_redchain.param.uves_cal_mbias.stack_method 
  
94 ····Method·used·to·build·master·frame··(str;·default:·'median')·[default="median"]. 
95 ..·py:attribute::·uves_obs_redchain.param.uves_cal_mbias.klow 
  
96 ····Kappa·used·to·clip·low·level·values,·when·method·is·set·to·'mean'··(float;·default:·5.0)·[default=5.0]. 
97 ..·py:attribute::·uves_obs_redchain.param.uves_cal_mbias.khigh 
  
98 ····Kappa·used·to·clip·high·level·values,·when·method·is·set·to·'mean'··(float;·default:·5.0)·[default=5.0]. 
99 ..·py:attribute::·uves_obs_redchain.param.uves_cal_mbias.niter 
  
100 ····Number·of·kappa·sigma·iterations,·when·method·is·set·to·'mean'··(int;··default:·5)·[default=5]. 
101 ..·py:attribute::·uves_obs_redchain.param.uves_cal_mdark.stack_method 
  
102 ····Method·used·to·build·master·frame··(str;·default:·'median')·[default="median"]. 
103 ..·py:attribute::·uves_obs_redchain.param.uves_cal_mdark.klow 
  
104 ····Kappa·used·to·clip·low·level·values,·when·method·is·set·to·'mean'··(float;·default:·5.0)·[default=5.0]. 
105 ..·py:attribute::·uves_obs_redchain.param.uves_cal_mdark.khigh 
  
106 ····Kappa·used·to·clip·high·level·values,·when·method·is·set·to·'mean'··(float;·default:·5.0)·[default=5.0]. 
107 ..·py:attribute::·uves_obs_redchain.param.uves_cal_mdark.niter 
  
108 ····Number·of·kappa·sigma·iterations,·when·method·is·set·to·'mean'··(int;··default:·5)·[default=5]. 
109 ..·py:attribute::·uves_obs_redchain.param.uves_cal_mdark.stack_method 
  
110 ····Method·used·to·build·master·frame··(str;·default:·'median')·[default="median"]. 
111 ..·py:attribute::·uves_obs_redchain.param.uves_cal_mdark.klow 
  
112 ····Kappa·used·to·clip·low·level·values,·when·method·is·set·to·'mean'··(float;·default:·5.0)·[default=5.0]. 
113 ..·py:attribute::·uves_obs_redchain.param.uves_cal_mdark.khigh 
  
114 ····Kappa·used·to·clip·high·level·values,·when·method·is·set·to·'mean'··(float;·default:·5.0)·[default=5.0]. 
115 ..·py:attribute::·uves_obs_redchain.param.uves_cal_mdark.niter 
  
116 ····Number·of·kappa·sigma·iterations,·when·method·is·set·to·'mean'··(int;··default:·5)·[default=5]. 
117 ..·py:attribute::·uves_obs_redchain.param.uves_cal_mdark.qc_dark.reg.num_x 
  
118 ····Number·of·regions·along·the·X·axis·(where·mean/med/rms·are·computed).··(int;·default:·4)·[default=4]. 
119 ..·py:attribute::·uves_obs_redchain.param.uves_cal_mdark.qc_dark.reg.num_y 
  
120 ····Number·of·regions·along·the·Y·axis(where·mean/med/rms·are·computed).··(int;·default:·4)·[default=4]. 
121 ..·py:attribute::·uves_obs_redchain.param.uves_cal_mdark.qc_dark.reg.box_sx 
  
122 ····Region·X·size·[pix]·(int;·default:·100)·[default=100]. 
123 ..·py:attribute::·uves_obs_redchain.param.uves_cal_mdark.qc_dark.reg.box_sy 
  
124 ····Region·Y·size·[pix]·(int;·default:·100)·[default=100]. 
125 ..·py:attribute::·uves_obs_redchain.param.uves_cal_mdark.qc_dark.reg.border_x 
  
126 ····X·distance·between·the·left·hand·side·of·the·detector·and·the·left··hand·side·of·the·region·[pix]·(int;·default:·100)·[default=100]. 
127 ..·py:attribute::·uves_obs_redchain.param.uves_cal_mdark.qc_dark.reg.border_y 
  
128 ····X·distance·between·the·left·hand·side·of·the·detector·and·the·left··hand·side·of·the·region·[pix]·(int;·default:·100)·[default=100]. 
129 ..·py:attribute::·uves_obs_redchain.param.uves_cal_mdark.qc_dark.reg.when 
  
130 ····When·QC·analysis·is·performed.·0:·on·each·raw·frame·or·1:·on·the··master·frame·(int;·default:·0)·[default=0]. 
131 ..·py:attribute::·uves_obs_redchain.param.uves_obs_scired.clean_traps67 ..·py:attribute::·uves_obs_redchain.param.uves_obs_scired.clean_traps
  
132 ····Clean·detector·traps.·If·TRUE·detector·traps·are·interpolated.The·bad··pixels·are·replaced·by·the·average·of·thenearest·good·pixels·in·the··same·column,·or·simply·marked·as·bad.·The·positions·of·bad·pixels·are··hard-coded·(as·function·of·UVES·chip).·(bool;·default:·False)·[default=False].68 ····Clean·detector·traps.·If·TRUE·detector·traps·are·interpolated.The·bad··pixels·are·replaced·by·the·average·of·thenearest·good·pixels·in·the··same·column,·or·simply·marked·as·bad.·The·positions·of·bad·pixels·are··hard-coded·(as·function·of·UVES·chip).·(bool;·default:·False)·[default=False].
133 ..·py:attribute::·uves_obs_redchain.param.uves_obs_scired.reduce.slitlength69 ..·py:attribute::·uves_obs_redchain.param.uves_obs_scired.reduce.slitlength
  
134 ····Extraction·slit·length·(in·pixels).·If·negative,·the·value·inferred··from·the·raw·frame·header·is·used·(float;·default:·-1.0)·[default=-1.0].70 ····Extraction·slit·length·(in·pixels).·If·negative,·the·value·inferred··from·the·raw·frame·header·is·used·(float;·default:·-1.0)·[default=-1.0].
135 ..·py:attribute::·uves_obs_redchain.param.uves_obs_scired.reduce.skysub71 ..·py:attribute::·uves_obs_redchain.param.uves_obs_scired.reduce.skysub
Offset 188, 41 lines modifiedOffset 92, 14 lines modified
188 ····Order·merging·method.·If·'optimal',·the·flux·in·the·overlapping·region··is·set·to·the·(optimally·computed,·using·the·uncertainties)·average·of··single·order·spectra.·If·'sum',·the·flux·in·the·overlapping·region·is··computed·as·the·sum·of·the·single·order·spectra.·If·'noappend'·the··spectrum·is·simply·rebinned·but·not·merged.If·flat-fielding·is·done,··method·'optimal'·is·recommended,·otherwise·'sum'.·(str;·default:··'optimal')·[default="optimal"].92 ····Order·merging·method.·If·'optimal',·the·flux·in·the·overlapping·region··is·set·to·the·(optimally·computed,·using·the·uncertainties)·average·of··single·order·spectra.·If·'sum',·the·flux·in·the·overlapping·region·is··computed·as·the·sum·of·the·single·order·spectra.·If·'noappend'·the··spectrum·is·simply·rebinned·but·not·merged.If·flat-fielding·is·done,··method·'optimal'·is·recommended,·otherwise·'sum'.·(str;·default:··'optimal')·[default="optimal"].
189 ..·py:attribute::·uves_obs_redchain.param.uves_obs_scired.reduce.merge_delt193 ..·py:attribute::·uves_obs_redchain.param.uves_obs_scired.reduce.merge_delt1
  
190 ····Order·merging·left·hand·(short·wavelength)·cut.·To·reduce·the·amount··of·order·overlapping·regions·we·allow·to·cut·short·and·long·wavelength··ranges.·This·may·reduce·the·ripple·possibly·introduced·by·the·order··merging.·Suggested·values·are:·10·(W<=390),·12·(390<W<=437,··520<W<=564),·14·(437<W<=520,·564<W)··(float;·default:·0.0)·[default=0.0].94 ····Order·merging·left·hand·(short·wavelength)·cut.·To·reduce·the·amount··of·order·overlapping·regions·we·allow·to·cut·short·and·long·wavelength··ranges.·This·may·reduce·the·ripple·possibly·introduced·by·the·order··merging.·Suggested·values·are:·10·(W<=390),·12·(390<W<=437,··520<W<=564),·14·(437<W<=520,·564<W)··(float;·default:·0.0)·[default=0.0].
191 ..·py:attribute::·uves_obs_redchain.param.uves_obs_scired.reduce.merge_delt295 ..·py:attribute::·uves_obs_redchain.param.uves_obs_scired.reduce.merge_delt2
  
192 ····Order·merging·right·hand·(long·wavelength)·cut.·To·reduce·the·amount··of·order·overlapping·regions·we·allow·to·cut·short·and·long·wavelength··ranges.·This·may·reduce·the·ripple·possibly·introduced·by·the·order··merging.·Suggested·values·is·4·(float;·default:·0.0)·[default=0.0].96 ····Order·merging·right·hand·(long·wavelength)·cut.·To·reduce·the·amount··of·order·overlapping·regions·we·allow·to·cut·short·and·long·wavelength··ranges.·This·may·reduce·the·ripple·possibly·introduced·by·the·order··merging.·Suggested·values·is·4·(float;·default:·0.0)·[default=0.0].
193 ..·py:attribute::·uves_obs_redchain.param.uves_obs_scired.reduce.rebin.wavestep 
  
194 ····The·bin·size·(in·w.l.u.)·in·wavelength·space.·If·negative,·a·step·size··of·2/3·*·(·average·pixel·size·)·is·used.·(float;·default:·-1.0)·[default=-1.0]. 
195 ..·py:attribute::·uves_obs_redchain.param.uves_obs_scired.reduce.rebin.scale 
  
196 ····Whether·or·not·to·multiply·by·the·factor·dx/dlambda·(pixels·per··wavelength)·during·the·rebinning.·This·option·is·disabled·as·default··in·concordance·with·the·method·used·in·the·MIDAS·pipeline.·This·option··should·be·set·to·true·to·convert·the·observed·flux·(in·pixel-space)·to··a·flux·per·wavelength·(in·wavelength-space).·(bool;·default:·False)·[default=False]. 
197 ..·py:attribute::·uves_obs_redchain.param.uves_obs_scired.reduce.extract.method 
  
198 ····Extraction·method.·(2d/optimal·not·supported·by·uves_cal_wavecal,··weighted·supported·only·by·uves_cal_wavecal,·2d·not·supported·by··uves_cal_response)·(str;·default:·'optimal')·[default="optimal"]. 
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152 <dl·class="attribute">152 <dl·class="attribute">
153 <dt·id="flames_obs_redchain.param.process_chip">153 <dt·id="flames_obs_redchain.param.process_chip">
154 <code·class="descclassname">flames_obs_redchain.param.</code><code·class="descname">process_chip</code><a·class="headerlink"·href="#flames_obs_redchain.param.process_chip"·title="Permalink·to·this·definition">¶</a></dt>154 <code·class="descclassname">flames_obs_redchain.param.</code><code·class="descname">process_chip</code><a·class="headerlink"·href="#flames_obs_redchain.param.process_chip"·title="Permalink·to·this·definition">¶</a></dt>
155 <dd><p>For·RED·arm·data·process·the·redl,·redu,·or·both·chip(s)·(str;··default:·‘both’)·[default=”both”].</p>155 <dd><p>For·RED·arm·data·process·the·redl,·redu,·or·both·chip(s)·(str;··default:·‘both’)·[default=”both”].</p>
156 </dd></dl>156 </dd></dl>
  
157 <dl·class="attribute">157 <dl·class="attribute">
 158 <dt·id="flames_obs_redchain.param.flames_cal_orderpos.use_guess_tab">
 159 <code·class="descclassname">flames_obs_redchain.param.flames_cal_orderpos.</code><code·class="descname">use_guess_tab</code><a·class="headerlink"·href="#flames_obs_redchain.param.flames_cal_orderpos.use_guess_tab"·title="Permalink·to·this·definition">¶</a></dt>
 160 <dd><p>If·a·Guess·order·table·is·provided·this·parameter·set·how·it·is··used:0:·No·usage,·1:·use·it·to·set·lower/upper·Y·raws·where·order·are··searched·2:·the·order·table·try·to·fully·match·the·guess·(int;··default:·1)·[default=1].</p>
 161 </dd></dl>
  
 162 <dl·class="attribute">
 163 <dt·id="flames_obs_redchain.param.flames_cal_orderpos.radx">
 164 <code·class="descclassname">flames_obs_redchain.param.flames_cal_orderpos.</code><code·class="descname">radx</code><a·class="headerlink"·href="#flames_obs_redchain.param.flames_cal_orderpos.radx"·title="Permalink·to·this·definition">¶</a></dt>
 165 <dd><p>Half·X·size·of·median·filtering·window·(int;·default:·2)·[default=2].</p>
 166 </dd></dl>
  
 167 <dl·class="attribute">
 168 <dt·id="flames_obs_redchain.param.flames_cal_orderpos.rady">
 169 <code·class="descclassname">flames_obs_redchain.param.flames_cal_orderpos.</code><code·class="descname">rady</code><a·class="headerlink"·href="#flames_obs_redchain.param.flames_cal_orderpos.rady"·title="Permalink·to·this·definition">¶</a></dt>
 170 <dd><p>Half·Y·size·of·median·filtering·window·(int;·default:·1)·[default=1].</p>
 171 </dd></dl>
  
 172 <dl·class="attribute">
 173 <dt·id="flames_obs_redchain.param.flames_cal_orderpos.mmethod">
 174 <code·class="descclassname">flames_obs_redchain.param.flames_cal_orderpos.</code><code·class="descname">mmethod</code><a·class="headerlink"·href="#flames_obs_redchain.param.flames_cal_orderpos.mmethod"·title="Permalink·to·this·definition">¶</a></dt>
 175 <dd><p>Background·subtraction·method.·If·equal·to·‘median’·the·background·is··sampled·using·the·median·of·a·sub-window.·If·‘minimum’,·the·minimum··sub-window·value·is·used.·If·‘no’,·no·background·subtraction·is·done.··(str;·default:·‘median’)·[default=”median”].</p>
 176 </dd></dl>
  
 177 <dl·class="attribute">
 178 <dt·id="flames_obs_redchain.param.flames_cal_orderpos.backsubgrid">
 179 <code·class="descclassname">flames_obs_redchain.param.flames_cal_orderpos.</code><code·class="descname">backsubgrid</code><a·class="headerlink"·href="#flames_obs_redchain.param.flames_cal_orderpos.backsubgrid"·title="Permalink·to·this·definition">¶</a></dt>
 180 <dd><p>Number·of·grid·points·(in·x-·and·y-direction)·used·to·estimate·the··background·(mode=poly).·(int;·default:·50)·[default=50].</p>
 181 </dd></dl>
  
 182 <dl·class="attribute">
 183 <dt·id="flames_obs_redchain.param.flames_cal_orderpos.backsubradiusy">
 184 <code·class="descclassname">flames_obs_redchain.param.flames_cal_orderpos.</code><code·class="descname">backsubradiusy</code><a·class="headerlink"·href="#flames_obs_redchain.param.flames_cal_orderpos.backsubradiusy"·title="Permalink·to·this·definition">¶</a></dt>
 185 <dd><p>The·height·(in·pixels)·of·the·background·sampling·window·is·(2*radiusy··+·1).·This·parameter·is·not·corrected·for·binning.·(int;·default:·2)·[default=2].</p>
 186 </dd></dl>
  
 187 <dl·class="attribute">
 188 <dt·id="flames_obs_redchain.param.flames_cal_orderpos.backsubkappa">
 189 <code·class="descclassname">flames_obs_redchain.param.flames_cal_orderpos.</code><code·class="descname">backsubkappa</code><a·class="headerlink"·href="#flames_obs_redchain.param.flames_cal_orderpos.backsubkappa"·title="Permalink·to·this·definition">¶</a></dt>
 190 <dd><p>The·value·of·kappa·in·the·one-sided·kappa-sigma·clipping·used·to··estimate·the·background·(mode=poly).·(float;·default:·4.0)·[default=4.0].</p>
 191 </dd></dl>
  
 192 <dl·class="attribute">
 193 <dt·id="flames_obs_redchain.param.flames_cal_orderpos.backsubdegx">
 194 <code·class="descclassname">flames_obs_redchain.param.flames_cal_orderpos.</code><code·class="descname">backsubdegx</code><a·class="headerlink"·href="#flames_obs_redchain.param.flames_cal_orderpos.backsubdegx"·title="Permalink·to·this·definition">¶</a></dt>
 195 <dd><p>Degree·(in·x)·of·polynomial·used·to·estimate·the·background··(mode=poly).·(int;·default:·2)·[default=2].</p>
 196 </dd></dl>
  
 197 <dl·class="attribute">
 198 <dt·id="flames_obs_redchain.param.flames_cal_orderpos.backsubdegy">
 199 <code·class="descclassname">flames_obs_redchain.param.flames_cal_orderpos.</code><code·class="descname">backsubdegy</code><a·class="headerlink"·href="#flames_obs_redchain.param.flames_cal_orderpos.backsubdegy"·title="Permalink·to·this·definition">¶</a></dt>
 200 <dd><p>Degree·(in·y)·of·polynomial·used·to·estimate·the·background··(mode=poly).·(int;·default:·2)·[default=2].</p>
 201 </dd></dl>
  
 202 <dl·class="attribute">
 203 <dt·id="flames_obs_redchain.param.flames_cal_orderpos.samplewidth">
 204 <code·class="descclassname">flames_obs_redchain.param.flames_cal_orderpos.</code><code·class="descname">samplewidth</code><a·class="headerlink"·href="#flames_obs_redchain.param.flames_cal_orderpos.samplewidth"·title="Permalink·to·this·definition">¶</a></dt>
 205 <dd><p>Separation·of·sample·traces·(used·by·Hough·transform)·in·input·image··(int;·default:·50)·[default=50].</p>
 206 </dd></dl>
  
 207 <dl·class="attribute">
 208 <dt·id="flames_obs_redchain.param.flames_cal_orderpos.minslope">
 209 <code·class="descclassname">flames_obs_redchain.param.flames_cal_orderpos.</code><code·class="descname">minslope</code><a·class="headerlink"·href="#flames_obs_redchain.param.flames_cal_orderpos.minslope"·title="Permalink·to·this·definition">¶</a></dt>
 210 <dd><p>Minimum·possible·line·slope.·This·should·be·the·‘physical’·slope·on··the·chip,·i.e.·not·taking·binning·factors·into·account,·which·is··handled·by·the·recipe·(float;·default:·0.0)·[default=0.0].</p>
 211 </dd></dl>
  
 212 <dl·class="attribute">
 213 <dt·id="flames_obs_redchain.param.flames_cal_orderpos.maxslope">
 214 <code·class="descclassname">flames_obs_redchain.param.flames_cal_orderpos.</code><code·class="descname">maxslope</code><a·class="headerlink"·href="#flames_obs_redchain.param.flames_cal_orderpos.maxslope"·title="Permalink·to·this·definition">¶</a></dt>
 215 <dd><p>Maximum·possible·line·slope·(float;·default:·0.2)·[default=0.2].</p>
 216 </dd></dl>
  
 217 <dl·class="attribute">
 218 <dt·id="flames_obs_redchain.param.flames_cal_orderpos.sloperes">
 219 <code·class="descclassname">flames_obs_redchain.param.flames_cal_orderpos.</code><code·class="descname">sloperes</code><a·class="headerlink"·href="#flames_obs_redchain.param.flames_cal_orderpos.sloperes"·title="Permalink·to·this·definition">¶</a></dt>
 220 <dd><p>Resolution·(width·in·pixels)·of·Hough·space·(int;·default:·120)·[default=120].</p>
 221 </dd></dl>
  
 222 <dl·class="attribute">
 223 <dt·id="flames_obs_redchain.param.flames_cal_orderpos.pthres">
 224 <code·class="descclassname">flames_obs_redchain.param.flames_cal_orderpos.</code><code·class="descname">pthres</code><a·class="headerlink"·href="#flames_obs_redchain.param.flames_cal_orderpos.pthres"·title="Permalink·to·this·definition">¶</a></dt>
 225 <dd><p>In·automatic·mode,·or·if·the·number·of·orders·to·detect·is·read·from·a··guess·table,·the·detection·of·new·lines·stops·when·the·intensity·of·a··candidate·line·drops·to·less·than·‘pthres’·times·the·intensity·of·the··previous·detection.··(float;·default:·0.2)·[default=0.2].</p>
 226 </dd></dl>
  
 227 <dl·class="attribute">
 228 <dt·id="flames_obs_redchain.param.flames_cal_orderpos.tracestep">
 229 <code·class="descclassname">flames_obs_redchain.param.flames_cal_orderpos.</code><code·class="descname">tracestep</code><a·class="headerlink"·href="#flames_obs_redchain.param.flames_cal_orderpos.tracestep"·title="Permalink·to·this·definition">¶</a></dt>
 230 <dd><p>The·step·size·used·when·tracing·the·orders·(int;·default:·10)·[default=10].</p>
 231 </dd></dl>
  
 232 <dl·class="attribute">
 233 <dt·id="flames_obs_redchain.param.flames_cal_orderpos.minthresh">
 234 <code·class="descclassname">flames_obs_redchain.param.flames_cal_orderpos.</code><code·class="descname">minthresh</code><a·class="headerlink"·href="#flames_obs_redchain.param.flames_cal_orderpos.minthresh"·title="Permalink·to·this·definition">¶</a></dt>
 235 <dd><p>The·minimum·threshold·value·is·(min·+·minthres*(max·-·min)).·Here··‘min’·and·‘max’·are·the·lowest·and·highest·pixel·values·in·the·central··bin·of·the·order·(float;·default:·0.2)·[default=0.2].</p>
 236 </dd></dl>
  
 237 <dl·class="attribute">
 238 <dt·id="flames_obs_redchain.param.flames_cal_orderpos.maxgap">
 239 <code·class="descclassname">flames_obs_redchain.param.flames_cal_orderpos.</code><code·class="descname">maxgap</code><a·class="headerlink"·href="#flames_obs_redchain.param.flames_cal_orderpos.maxgap"·title="Permalink·to·this·definition">¶</a></dt>
 240 <dd><p>If·the·order·line·drops·below·detection·threshold,·the·order·tracing··algorithm·will·try·to·jump·a·gap·of·maximum·size·‘maxgap’·multiplied··by·the·image·width·(float;·default:·0.2)·[default=0.2].</p>
 241 </dd></dl>
  
 242 <dl·class="attribute">
 243 <dt·id="flames_obs_redchain.param.flames_cal_orderpos.maxrms">
 244 <code·class="descclassname">flames_obs_redchain.param.flames_cal_orderpos.</code><code·class="descname">maxrms</code><a·class="headerlink"·href="#flames_obs_redchain.param.flames_cal_orderpos.maxrms"·title="Permalink·to·this·definition">¶</a></dt>
 245 <dd><p>When·fitting·the·orders·with·straight·lines,·this·is·the·maximum··allowed·RMS·relative·to·the·median·RMS·of·all·orders·(float;·default:··100.0)·[default=100.0].</p>
 246 </dd></dl>
  
 247 <dl·class="attribute">
 248 <dt·id="flames_obs_redchain.param.flames_cal_orderpos.defpol1">
 249 <code·class="descclassname">flames_obs_redchain.param.flames_cal_orderpos.</code><code·class="descname">defpol1</code><a·class="headerlink"·href="#flames_obs_redchain.param.flames_cal_orderpos.defpol1"·title="Permalink·to·this·definition">¶</a></dt>
 250 <dd><p>The·degree·of·the·bivarite·fit·(cross·dispersion·direction).·If··negative,·the·degree·is·optimized·to·give·the·best·fit·(int;·default:··-1)·[default=-1].</p>
 251 </dd></dl>
  
 252 <dl·class="attribute">
 253 <dt·id="flames_obs_redchain.param.flames_cal_orderpos.defpol2">
 254 <code·class="descclassname">flames_obs_redchain.param.flames_cal_orderpos.</code><code·class="descname">defpol2</code><a·class="headerlink"·href="#flames_obs_redchain.param.flames_cal_orderpos.defpol2"·title="Permalink·to·this·definition">¶</a></dt>
 255 <dd><p>The·degree·of·the·bivarite·fit·(order·number).·If·negative,·the·degree··is·optimized·to·give·the·best·fit·(int;·default:·-1)·[default=-1].</p>
 256 </dd></dl>
  
 257 <dl·class="attribute">
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207 <dl·class="attribute">207 <dl·class="attribute">
208 <dt·id="uves_cal_mkmaster.param.norm_method">208 <dt·id="uves_cal_mkmaster.param.norm_method">
209 <code·class="descclassname">uves_cal_mkmaster.param.</code><code·class="descname">norm_method</code><a·class="headerlink"·href="#uves_cal_mkmaster.param.norm_method"·title="Permalink·to·this·definition">¶</a></dt>209 <code·class="descclassname">uves_cal_mkmaster.param.</code><code·class="descname">norm_method</code><a·class="headerlink"·href="#uves_cal_mkmaster.param.norm_method"·title="Permalink·to·this·definition">¶</a></dt>
210 <dd><p>Method·used·to·build·master·frame··(str;·default:·‘explevel’)·[default=”explevel”].</p>210 <dd><p>Method·used·to·build·master·frame··(str;·default:·‘explevel’)·[default=”explevel”].</p>
211 </dd></dl>211 </dd></dl>
  
212 <dl·class="attribute">212 <dl·class="attribute">
213 <dt·id="uves_cal_mkmaster.param.backsub.mmethod"> 
214 <code·class="descclassname">uves_cal_mkmaster.param.backsub.</code><code·class="descname">mmethod</code><a·class="headerlink"·href="#uves_cal_mkmaster.param.backsub.mmethod"·title="Permalink·to·this·definition">¶</a></dt> 
215 <dd><p>Background·measuring·method.·If·equal·to·‘median’·the·background·is··sampled·using·the·median·of·a·subwindow.·If·‘minimum’,·the·subwindow··minimum·value·is·used.·If·‘no’,·no·background·subtraction·is·done.··(str;·default:·‘median’)·[default=”median”].</p> 
216 </dd></dl> 
  
217 <dl·class="attribute"> 
218 <dt·id="uves_cal_mkmaster.param.backsub.npoints"> 
219 <code·class="descclassname">uves_cal_mkmaster.param.backsub.</code><code·class="descname">npoints</code><a·class="headerlink"·href="#uves_cal_mkmaster.param.backsub.npoints"·title="Permalink·to·this·definition">¶</a></dt> 
220 <dd><p>This·is·the·number·of·columns·in·interorder·space·used·to·sample·the··background.·(int;·default:·82)·[default=82].</p> 
221 </dd></dl> 
  
222 <dl·class="attribute"> 
223 <dt·id="uves_cal_mkmaster.param.backsub.radiusy"> 
224 <code·class="descclassname">uves_cal_mkmaster.param.backsub.</code><code·class="descname">radiusy</code><a·class="headerlink"·href="#uves_cal_mkmaster.param.backsub.radiusy"·title="Permalink·to·this·definition">¶</a></dt> 
225 <dd><p>The·height·(in·pixels)·of·the·background·sampling·window·is·(2*radiusy··+·1).·This·parameter·is·not·corrected·for·binning.·(int;·default:·2)·[default=2].</p> 
226 </dd></dl> 
  
227 <dl·class="attribute"> 
228 <dt·id="uves_cal_mkmaster.param.backsub.sdegree"> 
229 <code·class="descclassname">uves_cal_mkmaster.param.backsub.</code><code·class="descname">sdegree</code><a·class="headerlink"·href="#uves_cal_mkmaster.param.backsub.sdegree"·title="Permalink·to·this·definition">¶</a></dt> 
230 <dd><p>Degree·of·interpolating·splines.·Currently·only·degree·=·1·is··supported·(int;·default:·1)·[default=1].</p> 
231 </dd></dl> 
  
232 <dl·class="attribute"> 
233 <dt·id="uves_cal_mkmaster.param.backsub.smoothx"> 
234 <code·class="descclassname">uves_cal_mkmaster.param.backsub.</code><code·class="descname">smoothx</code><a·class="headerlink"·href="#uves_cal_mkmaster.param.backsub.smoothx"·title="Permalink·to·this·definition">¶</a></dt> 
235 <dd><p>If·spline·interpolation·is·used·to·measure·the·background,·the··x-radius·of·the·post-smoothing·window·is·(smoothx·*·image_width).··Here,·‘image_width’·is·the·image·width·after·binning.·If·negative,·the··default·values·are·used:·(25.0/4096)·for·blue·flat-field·frames,··(50.0/4096)·for·red·flat-field·frames,·(300.0/4096)·for·blue·science··frames·and·(300.0/4096)·for·red·science·frames.·(float;·default:·-1.0)·[default=-1.0].</p> 
236 </dd></dl> 
  
237 <dl·class="attribute"> 
238 <dt·id="uves_cal_mkmaster.param.backsub.smoothy"> 
239 <code·class="descclassname">uves_cal_mkmaster.param.backsub.</code><code·class="descname">smoothy</code><a·class="headerlink"·href="#uves_cal_mkmaster.param.backsub.smoothy"·title="Permalink·to·this·definition">¶</a></dt> 
240 <dd><p>If·spline·interpolation·is·used·to·measure·the·background,·the··y-radius·of·the·post-smoothing·window·is·(smoothy·*·image_height).··Here,·‘image_height’·is·the·image·height·after·binning.·If·negative,··the·default·values·are·used:·(100.0/2048)·for·blue·flat-field·frames,··(300.0/2048)·for·red·flat-field·frames,·(200.0/2048)·for·blue·science··frames·and·(500.0/2048)·for·red·science·frames.·(float;·default:·-1.0)·[default=-1.0].</p> 
241 </dd></dl> 
  
242 <dl·class="attribute"> 
243 <dt·id="uves_cal_mkmaster.param.qc_dark.reg.num_x">213 <dt·id="uves_cal_mkmaster.param.qc_dark.reg.num_x">
244 <code·class="descclassname">uves_cal_mkmaster.param.qc_dark.reg.</code><code·class="descname">num_x</code><a·class="headerlink"·href="#uves_cal_mkmaster.param.qc_dark.reg.num_x"·title="Permalink·to·this·definition">¶</a></dt>214 <code·class="descclassname">uves_cal_mkmaster.param.qc_dark.reg.</code><code·class="descname">num_x</code><a·class="headerlink"·href="#uves_cal_mkmaster.param.qc_dark.reg.num_x"·title="Permalink·to·this·definition">¶</a></dt>
245 <dd><p>Number·of·regions·along·the·X·axis·(where·mean/med/rms·are·computed).··(int;·default:·4)·[default=4].</p>215 <dd><p>Number·of·regions·along·the·X·axis·(where·mean/med/rms·are·computed).··(int;·default:·4)·[default=4].</p>
246 </dd></dl>216 </dd></dl>
  
247 <dl·class="attribute">217 <dl·class="attribute">
248 <dt·id="uves_cal_mkmaster.param.qc_dark.reg.num_y">218 <dt·id="uves_cal_mkmaster.param.qc_dark.reg.num_y">
Offset 284, 14 lines modifiedOffset 248, 50 lines modified
  
284 <dl·class="attribute">248 <dl·class="attribute">
285 <dt·id="uves_cal_mkmaster.param.qc_dark.reg.when">249 <dt·id="uves_cal_mkmaster.param.qc_dark.reg.when">
286 <code·class="descclassname">uves_cal_mkmaster.param.qc_dark.reg.</code><code·class="descname">when</code><a·class="headerlink"·href="#uves_cal_mkmaster.param.qc_dark.reg.when"·title="Permalink·to·this·definition">¶</a></dt>250 <code·class="descclassname">uves_cal_mkmaster.param.qc_dark.reg.</code><code·class="descname">when</code><a·class="headerlink"·href="#uves_cal_mkmaster.param.qc_dark.reg.when"·title="Permalink·to·this·definition">¶</a></dt>
287 <dd><p>When·QC·analysis·is·performed.·0:·on·each·raw·frame·or·1:·on·the··master·frame·(int;·default:·0)·[default=0].</p>251 <dd><p>When·QC·analysis·is·performed.·0:·on·each·raw·frame·or·1:·on·the··master·frame·(int;·default:·0)·[default=0].</p>
288 </dd></dl>252 </dd></dl>
  
 253 <dl·class="attribute">
 254 <dt·id="uves_cal_mkmaster.param.backsub.mmethod">
 255 <code·class="descclassname">uves_cal_mkmaster.param.backsub.</code><code·class="descname">mmethod</code><a·class="headerlink"·href="#uves_cal_mkmaster.param.backsub.mmethod"·title="Permalink·to·this·definition">¶</a></dt>
 256 <dd><p>Background·measuring·method.·If·equal·to·‘median’·the·background·is··sampled·using·the·median·of·a·subwindow.·If·‘minimum’,·the·subwindow··minimum·value·is·used.·If·‘no’,·no·background·subtraction·is·done.··(str;·default:·‘median’)·[default=”median”].</p>
 257 </dd></dl>
  
 258 <dl·class="attribute">
 259 <dt·id="uves_cal_mkmaster.param.backsub.npoints">
 260 <code·class="descclassname">uves_cal_mkmaster.param.backsub.</code><code·class="descname">npoints</code><a·class="headerlink"·href="#uves_cal_mkmaster.param.backsub.npoints"·title="Permalink·to·this·definition">¶</a></dt>
 261 <dd><p>This·is·the·number·of·columns·in·interorder·space·used·to·sample·the··background.·(int;·default:·82)·[default=82].</p>
 262 </dd></dl>
  
 263 <dl·class="attribute">
 264 <dt·id="uves_cal_mkmaster.param.backsub.radiusy">
 265 <code·class="descclassname">uves_cal_mkmaster.param.backsub.</code><code·class="descname">radiusy</code><a·class="headerlink"·href="#uves_cal_mkmaster.param.backsub.radiusy"·title="Permalink·to·this·definition">¶</a></dt>
 266 <dd><p>The·height·(in·pixels)·of·the·background·sampling·window·is·(2*radiusy··+·1).·This·parameter·is·not·corrected·for·binning.·(int;·default:·2)·[default=2].</p>
 267 </dd></dl>
  
 268 <dl·class="attribute">
 269 <dt·id="uves_cal_mkmaster.param.backsub.sdegree">
 270 <code·class="descclassname">uves_cal_mkmaster.param.backsub.</code><code·class="descname">sdegree</code><a·class="headerlink"·href="#uves_cal_mkmaster.param.backsub.sdegree"·title="Permalink·to·this·definition">¶</a></dt>
 271 <dd><p>Degree·of·interpolating·splines.·Currently·only·degree·=·1·is··supported·(int;·default:·1)·[default=1].</p>
 272 </dd></dl>
  
 273 <dl·class="attribute">
 274 <dt·id="uves_cal_mkmaster.param.backsub.smoothx">
 275 <code·class="descclassname">uves_cal_mkmaster.param.backsub.</code><code·class="descname">smoothx</code><a·class="headerlink"·href="#uves_cal_mkmaster.param.backsub.smoothx"·title="Permalink·to·this·definition">¶</a></dt>
 276 <dd><p>If·spline·interpolation·is·used·to·measure·the·background,·the··x-radius·of·the·post-smoothing·window·is·(smoothx·*·image_width).··Here,·‘image_width’·is·the·image·width·after·binning.·If·negative,·the··default·values·are·used:·(25.0/4096)·for·blue·flat-field·frames,··(50.0/4096)·for·red·flat-field·frames,·(300.0/4096)·for·blue·science··frames·and·(300.0/4096)·for·red·science·frames.·(float;·default:·-1.0)·[default=-1.0].</p>
 277 </dd></dl>
  
 278 <dl·class="attribute">
 279 <dt·id="uves_cal_mkmaster.param.backsub.smoothy">
 280 <code·class="descclassname">uves_cal_mkmaster.param.backsub.</code><code·class="descname">smoothy</code><a·class="headerlink"·href="#uves_cal_mkmaster.param.backsub.smoothy"·title="Permalink·to·this·definition">¶</a></dt>
 281 <dd><p>If·spline·interpolation·is·used·to·measure·the·background,·the··y-radius·of·the·post-smoothing·window·is·(smoothy·*·image_height).··Here,·‘image_height’·is·the·image·height·after·binning.·If·negative,··the·default·values·are·used:·(100.0/2048)·for·blue·flat-field·frames,··(300.0/2048)·for·red·flat-field·frames,·(200.0/2048)·for·blue·science··frames·and·(500.0/2048)·for·red·science·frames.·(float;·default:·-1.0)·[default=-1.0].</p>
 282 </dd></dl>
  
289 <p>The·following·code·snippet·shows·the·default·settings·for·the·available283 <p>The·following·code·snippet·shows·the·default·settings·for·the·available
290 parameters.</p>284 parameters.</p>
291 <div·class="highlight-default·notranslate"><div·class="highlight"><pre><span></span><span·class="kn">import</span>·<span·class="nn">cpl</span>285 <div·class="highlight-default·notranslate"><div·class="highlight"><pre><span></span><span·class="kn">import</span>·<span·class="nn">cpl</span>
292 <span·class="n">uves_cal_mkmaster</span>·<span·class="o">=</span>·<span·class="n">cpl</span><span·class="o">.</span><span·class="n">Recipe</span><span·class="p">(</span><span·class="s2">&quot;uves_cal_mkmaster&quot;</span><span·class="p">)</span>286 <span·class="n">uves_cal_mkmaster</span>·<span·class="o">=</span>·<span·class="n">cpl</span><span·class="o">.</span><span·class="n">Recipe</span><span·class="p">(</span><span·class="s2">&quot;uves_cal_mkmaster&quot;</span><span·class="p">)</span>
  
293 <span·class="n">uves_cal_mkmaster</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">stack_method</span>·<span·class="o">=</span>·<span·class="s2">&quot;median&quot;</span>287 <span·class="n">uves_cal_mkmaster</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">stack_method</span>·<span·class="o">=</span>·<span·class="s2">&quot;median&quot;</span>
294 <span·class="n">uves_cal_mkmaster</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">klow</span>·<span·class="o">=</span>·<span·class="mf">5.0</span>288 <span·class="n">uves_cal_mkmaster</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">klow</span>·<span·class="o">=</span>·<span·class="mf">5.0</span>
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305 <span·class="n">uves_cal_mkmaster</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">khigh</span>·<span·class="o">=</span>·<span·class="mf">5.0</span>305 <span·class="n">uves_cal_mkmaster</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">khigh</span>·<span·class="o">=</span>·<span·class="mf">5.0</span>
306 <span·class="n">uves_cal_mkmaster</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">niter</span>·<span·class="o">=</span>·<span·class="mi">5</span>306 <span·class="n">uves_cal_mkmaster</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">niter</span>·<span·class="o">=</span>·<span·class="mi">5</span>
307 <span·class="n">uves_cal_mkmaster</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">debug</span>·<span·class="o">=</span>·<span·class="kc">False</span>307 <span·class="n">uves_cal_mkmaster</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">debug</span>·<span·class="o">=</span>·<span·class="kc">False</span>
308 <span·class="n">uves_cal_mkmaster</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">plotter</span>·<span·class="o">=</span>·<span·class="s2">&quot;no&quot;</span>308 <span·class="n">uves_cal_mkmaster</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">plotter</span>·<span·class="o">=</span>·<span·class="s2">&quot;no&quot;</span>
309 <span·class="n">uves_cal_mkmaster</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">process_chip</span>·<span·class="o">=</span>·<span·class="s2">&quot;both&quot;</span>309 <span·class="n">uves_cal_mkmaster</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">process_chip</span>·<span·class="o">=</span>·<span·class="s2">&quot;both&quot;</span>
310 <span·class="n">uves_cal_mkmaster</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">clean_traps</span>·<span·class="o">=</span>·<span·class="kc">False</span>310 <span·class="n">uves_cal_mkmaster</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">clean_traps</span>·<span·class="o">=</span>·<span·class="kc">False</span>
311 <span·class="n">uves_cal_mkmaster</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">norm_method</span>·<span·class="o">=</span>·<span·class="s2">&quot;explevel&quot;</span>311 <span·class="n">uves_cal_mkmaster</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">norm_method</span>·<span·class="o">=</span>·<span·class="s2">&quot;explevel&quot;</span>
312 <span·class="n">uves_cal_mkmaster</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">backsub</span><span·class="o">.</span><span·class="n">mmethod</span>·<span·class="o">=</span>·<span·class="s2">&quot;median&quot;</span> 
313 <span·class="n">uves_cal_mkmaster</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">backsub</span><span·class="o">.</span><span·class="n">npoints</span>·<span·class="o">=</span>·<span·class="mi">82</span> 
314 <span·class="n">uves_cal_mkmaster</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">backsub</span><span·class="o">.</span><span·class="n">radiusy</span>·<span·class="o">=</span>·<span·class="mi">2</span> 
315 <span·class="n">uves_cal_mkmaster</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">backsub</span><span·class="o">.</span><span·class="n">sdegree</span>·<span·class="o">=</span>·<span·class="mi">1</span> 
316 <span·class="n">uves_cal_mkmaster</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">backsub</span><span·class="o">.</span><span·class="n">smoothx</span>·<span·class="o">=</span>·<span·class="o">-</span><span·class="mf">1.0</span> 
317 <span·class="n">uves_cal_mkmaster</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">backsub</span><span·class="o">.</span><span·class="n">smoothy</span>·<span·class="o">=</span>·<span·class="o">-</span><span·class="mf">1.0</span> 
318 <span·class="n">uves_cal_mkmaster</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">qc_dark</span><span·class="o">.</span><span·class="n">reg</span><span·class="o">.</span><span·class="n">num_x</span>·<span·class="o">=</span>·<span·class="mi">4</span>312 <span·class="n">uves_cal_mkmaster</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">qc_dark</span><span·class="o">.</span><span·class="n">reg</span><span·class="o">.</span><span·class="n">num_x</span>·<span·class="o">=</span>·<span·class="mi">4</span>
319 <span·class="n">uves_cal_mkmaster</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">qc_dark</span><span·class="o">.</span><span·class="n">reg</span><span·class="o">.</span><span·class="n">num_y</span>·<span·class="o">=</span>·<span·class="mi">4</span>313 <span·class="n">uves_cal_mkmaster</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">qc_dark</span><span·class="o">.</span><span·class="n">reg</span><span·class="o">.</span><span·class="n">num_y</span>·<span·class="o">=</span>·<span·class="mi">4</span>
320 <span·class="n">uves_cal_mkmaster</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">qc_dark</span><span·class="o">.</span><span·class="n">reg</span><span·class="o">.</span><span·class="n">box_sx</span>·<span·class="o">=</span>·<span·class="mi">100</span>314 <span·class="n">uves_cal_mkmaster</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">qc_dark</span><span·class="o">.</span><span·class="n">reg</span><span·class="o">.</span><span·class="n">box_sx</span>·<span·class="o">=</span>·<span·class="mi">100</span>
321 <span·class="n">uves_cal_mkmaster</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">qc_dark</span><span·class="o">.</span><span·class="n">reg</span><span·class="o">.</span><span·class="n">box_sy</span>·<span·class="o">=</span>·<span·class="mi">100</span>315 <span·class="n">uves_cal_mkmaster</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">qc_dark</span><span·class="o">.</span><span·class="n">reg</span><span·class="o">.</span><span·class="n">box_sy</span>·<span·class="o">=</span>·<span·class="mi">100</span>
322 <span·class="n">uves_cal_mkmaster</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">qc_dark</span><span·class="o">.</span><span·class="n">reg</span><span·class="o">.</span><span·class="n">border_x</span>·<span·class="o">=</span>·<span·class="mi">100</span>316 <span·class="n">uves_cal_mkmaster</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">qc_dark</span><span·class="o">.</span><span·class="n">reg</span><span·class="o">.</span><span·class="n">border_x</span>·<span·class="o">=</span>·<span·class="mi">100</span>
323 <span·class="n">uves_cal_mkmaster</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">qc_dark</span><span·class="o">.</span><span·class="n">reg</span><span·class="o">.</span><span·class="n">border_y</span>·<span·class="o">=</span>·<span·class="mi">100</span>317 <span·class="n">uves_cal_mkmaster</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">qc_dark</span><span·class="o">.</span><span·class="n">reg</span><span·class="o">.</span><span·class="n">border_y</span>·<span·class="o">=</span>·<span·class="mi">100</span>
324 <span·class="n">uves_cal_mkmaster</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">qc_dark</span><span·class="o">.</span><span·class="n">reg</span><span·class="o">.</span><span·class="n">when</span>·<span·class="o">=</span>·<span·class="mi">0</span>318 <span·class="n">uves_cal_mkmaster</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">qc_dark</span><span·class="o">.</span><span·class="n">reg</span><span·class="o">.</span><span·class="n">when</span>·<span·class="o">=</span>·<span·class="mi">0</span>
 319 <span·class="n">uves_cal_mkmaster</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">backsub</span><span·class="o">.</span><span·class="n">mmethod</span>·<span·class="o">=</span>·<span·class="s2">&quot;median&quot;</span>
 320 <span·class="n">uves_cal_mkmaster</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">backsub</span><span·class="o">.</span><span·class="n">npoints</span>·<span·class="o">=</span>·<span·class="mi">82</span>
 321 <span·class="n">uves_cal_mkmaster</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">backsub</span><span·class="o">.</span><span·class="n">radiusy</span>·<span·class="o">=</span>·<span·class="mi">2</span>
 322 <span·class="n">uves_cal_mkmaster</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">backsub</span><span·class="o">.</span><span·class="n">sdegree</span>·<span·class="o">=</span>·<span·class="mi">1</span>
 323 <span·class="n">uves_cal_mkmaster</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">backsub</span><span·class="o">.</span><span·class="n">smoothx</span>·<span·class="o">=</span>·<span·class="o">-</span><span·class="mf">1.0</span>
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152 <dl·class="attribute">152 <dl·class="attribute">
153 <dt·id="uves_obs_redchain.param.process_chip">153 <dt·id="uves_obs_redchain.param.process_chip">
154 <code·class="descclassname">uves_obs_redchain.param.</code><code·class="descname">process_chip</code><a·class="headerlink"·href="#uves_obs_redchain.param.process_chip"·title="Permalink·to·this·definition">¶</a></dt>154 <code·class="descclassname">uves_obs_redchain.param.</code><code·class="descname">process_chip</code><a·class="headerlink"·href="#uves_obs_redchain.param.process_chip"·title="Permalink·to·this·definition">¶</a></dt>
155 <dd><p>For·RED·arm·data·process·the·redl,·redu,·or·both·chip(s)·(str;··default:·‘both’)·[default=”both”].</p>155 <dd><p>For·RED·arm·data·process·the·redl,·redu,·or·both·chip(s)·(str;··default:·‘both’)·[default=”both”].</p>
156 </dd></dl>156 </dd></dl>
  
157 <dl·class="attribute">157 <dl·class="attribute">
158 <dt·id="uves_obs_redchain.param.uves_cal_predict.mbox_x"> 
159 <code·class="descclassname">uves_obs_redchain.param.uves_cal_predict.</code><code·class="descname">mbox_x</code><a·class="headerlink"·href="#uves_obs_redchain.param.uves_cal_predict.mbox_x"·title="Permalink·to·this·definition">¶</a></dt> 
160 <dd><p>Match·box·X·size·(int;·default:·40)·[default=40].</p> 
161 </dd></dl> 
  
162 <dl·class="attribute"> 
163 <dt·id="uves_obs_redchain.param.uves_cal_predict.mbox_y"> 
164 <code·class="descclassname">uves_obs_redchain.param.uves_cal_predict.</code><code·class="descname">mbox_y</code><a·class="headerlink"·href="#uves_obs_redchain.param.uves_cal_predict.mbox_y"·title="Permalink·to·this·definition">¶</a></dt> 
165 <dd><p>Match·box·Y·size·(int;·default:·40)·[default=40].</p> 
166 </dd></dl> 
  
167 <dl·class="attribute"> 
168 <dt·id="uves_obs_redchain.param.uves_cal_predict.trans_x"> 
169 <code·class="descclassname">uves_obs_redchain.param.uves_cal_predict.</code><code·class="descname">trans_x</code><a·class="headerlink"·href="#uves_obs_redchain.param.uves_cal_predict.trans_x"·title="Permalink·to·this·definition">¶</a></dt> 
170 <dd><p>Detector·translation·along·X·(float;·default:·0.0)·[default=0.0].</p> 
171 </dd></dl> 
  
172 <dl·class="attribute"> 
173 <dt·id="uves_obs_redchain.param.uves_cal_predict.trans_y"> 
174 <code·class="descclassname">uves_obs_redchain.param.uves_cal_predict.</code><code·class="descname">trans_y</code><a·class="headerlink"·href="#uves_obs_redchain.param.uves_cal_predict.trans_y"·title="Permalink·to·this·definition">¶</a></dt> 
175 <dd><p>Detector·translation·along·Y·(float;·default:·0.0)·[default=0.0].</p> 
176 </dd></dl> 
  
177 <dl·class="attribute"> 
178 <dt·id="uves_obs_redchain.param.uves_cal_predict.ech_angle_off"> 
179 <code·class="descclassname">uves_obs_redchain.param.uves_cal_predict.</code><code·class="descname">ech_angle_off</code><a·class="headerlink"·href="#uves_obs_redchain.param.uves_cal_predict.ech_angle_off"·title="Permalink·to·this·definition">¶</a></dt> 
180 <dd><p>Offset·on·echelle·angle·(float;·default:·0.0)·[default=0.0].</p> 
181 </dd></dl> 
  
182 <dl·class="attribute"> 
183 <dt·id="uves_obs_redchain.param.uves_cal_predict.cd_angle_off"> 
184 <code·class="descclassname">uves_obs_redchain.param.uves_cal_predict.</code><code·class="descname">cd_angle_off</code><a·class="headerlink"·href="#uves_obs_redchain.param.uves_cal_predict.cd_angle_off"·title="Permalink·to·this·definition">¶</a></dt> 
185 <dd><p>Offset·on·cross·disperser·angle·(float;·default:·0.0)·[default=0.0].</p> 
186 </dd></dl> 
  
187 <dl·class="attribute"> 
188 <dt·id="uves_obs_redchain.param.uves_cal_predict.ccd_rot_angle_off"> 
189 <code·class="descclassname">uves_obs_redchain.param.uves_cal_predict.</code><code·class="descname">ccd_rot_angle_off</code><a·class="headerlink"·href="#uves_obs_redchain.param.uves_cal_predict.ccd_rot_angle_off"·title="Permalink·to·this·definition">¶</a></dt> 
190 <dd><p>Offset·on·CCD·rotation·angle·(float;·default:·0.0)·[default=0.0].</p> 
191 </dd></dl> 
  
192 <dl·class="attribute"> 
193 <dt·id="uves_obs_redchain.param.uves_cal_predict.compute_regression_sw"> 
194 <code·class="descclassname">uves_obs_redchain.param.uves_cal_predict.</code><code·class="descname">compute_regression_sw</code><a·class="headerlink"·href="#uves_obs_redchain.param.uves_cal_predict.compute_regression_sw"·title="Permalink·to·this·definition">¶</a></dt> 
195 <dd><p>Compute·regression?·(bool;·default:·True)·[default=True].</p> 
196 </dd></dl> 
  
197 <dl·class="attribute"> 
198 <dt·id="uves_obs_redchain.param.uves_cal_predict.def_pol1"> 
199 <code·class="descclassname">uves_obs_redchain.param.uves_cal_predict.</code><code·class="descname">def_pol1</code><a·class="headerlink"·href="#uves_obs_redchain.param.uves_cal_predict.def_pol1"·title="Permalink·to·this·definition">¶</a></dt> 
200 <dd><p>Polynomial·X·deg·(int;·default:·4)·[default=4].</p> 
201 </dd></dl> 
  
202 <dl·class="attribute"> 
203 <dt·id="uves_obs_redchain.param.uves_cal_predict.def_pol2"> 
204 <code·class="descclassname">uves_obs_redchain.param.uves_cal_predict.</code><code·class="descname">def_pol2</code><a·class="headerlink"·href="#uves_obs_redchain.param.uves_cal_predict.def_pol2"·title="Permalink·to·this·definition">¶</a></dt> 
205 <dd><p>Polynomial·Y·deg·(int;·default:·5)·[default=5].</p> 
206 </dd></dl> 
  
207 <dl·class="attribute"> 
208 <dt·id="uves_obs_redchain.param.uves_cal_predict.kappa"> 
209 <code·class="descclassname">uves_obs_redchain.param.uves_cal_predict.</code><code·class="descname">kappa</code><a·class="headerlink"·href="#uves_obs_redchain.param.uves_cal_predict.kappa"·title="Permalink·to·this·definition">¶</a></dt> 
210 <dd><p>Kappa·value·in·kappa·sigma·clipping·on·RESIDUAL·between·YFIT·and·Y··columns·(float;·default:·4.5)·[default=4.5].</p> 
211 </dd></dl> 
  
212 <dl·class="attribute"> 
213 <dt·id="uves_obs_redchain.param.uves_cal_predict.tol"> 
214 <code·class="descclassname">uves_obs_redchain.param.uves_cal_predict.</code><code·class="descname">tol</code><a·class="headerlink"·href="#uves_obs_redchain.param.uves_cal_predict.tol"·title="Permalink·to·this·definition">¶</a></dt> 
215 <dd><p>Tolerance·in·kappa·sigma·clipping·on·RESIDUAL·between·YFIT·and·Y··columns·(float;·default:·2.0)·[default=2.0].</p> 
216 </dd></dl> 
  
217 <dl·class="attribute"> 
218 <dt·id="uves_obs_redchain.param.uves_cal_mbias.clean_traps"> 
219 <code·class="descclassname">uves_obs_redchain.param.uves_cal_mbias.</code><code·class="descname">clean_traps</code><a·class="headerlink"·href="#uves_obs_redchain.param.uves_cal_mbias.clean_traps"·title="Permalink·to·this·definition">¶</a></dt> 
220 <dd><p>Clean·detector·traps.·If·TRUE·detector·traps·are·interpolated.The·bad··pixels·are·replaced·by·the·average·of·thenearest·good·pixels·in·the··same·column,·or·simply·marked·as·bad.·The·positions·of·bad·pixels·are··hard-coded·(as·function·of·UVES·chip).·(bool;·default:·False)·[default=False].</p> 
221 </dd></dl> 
  
222 <dl·class="attribute"> 
223 <dt·id="uves_obs_redchain.param.uves_cal_mbias.stack_method"> 
224 <code·class="descclassname">uves_obs_redchain.param.uves_cal_mbias.</code><code·class="descname">stack_method</code><a·class="headerlink"·href="#uves_obs_redchain.param.uves_cal_mbias.stack_method"·title="Permalink·to·this·definition">¶</a></dt> 
225 <dd><p>Method·used·to·build·master·frame··(str;·default:·‘median’)·[default=”median”].</p> 
226 </dd></dl> 
  
227 <dl·class="attribute"> 
228 <dt·id="uves_obs_redchain.param.uves_cal_mbias.klow"> 
229 <code·class="descclassname">uves_obs_redchain.param.uves_cal_mbias.</code><code·class="descname">klow</code><a·class="headerlink"·href="#uves_obs_redchain.param.uves_cal_mbias.klow"·title="Permalink·to·this·definition">¶</a></dt> 
230 <dd><p>Kappa·used·to·clip·low·level·values,·when·method·is·set·to·‘mean’··(float;·default:·5.0)·[default=5.0].</p> 
231 </dd></dl> 
  
232 <dl·class="attribute"> 
233 <dt·id="uves_obs_redchain.param.uves_cal_mbias.khigh"> 
234 <code·class="descclassname">uves_obs_redchain.param.uves_cal_mbias.</code><code·class="descname">khigh</code><a·class="headerlink"·href="#uves_obs_redchain.param.uves_cal_mbias.khigh"·title="Permalink·to·this·definition">¶</a></dt> 
235 <dd><p>Kappa·used·to·clip·high·level·values,·when·method·is·set·to·‘mean’··(float;·default:·5.0)·[default=5.0].</p> 
236 </dd></dl> 
  
237 <dl·class="attribute"> 
238 <dt·id="uves_obs_redchain.param.uves_cal_mbias.niter"> 
239 <code·class="descclassname">uves_obs_redchain.param.uves_cal_mbias.</code><code·class="descname">niter</code><a·class="headerlink"·href="#uves_obs_redchain.param.uves_cal_mbias.niter"·title="Permalink·to·this·definition">¶</a></dt> 
240 <dd><p>Number·of·kappa·sigma·iterations,·when·method·is·set·to·‘mean’··(int;··default:·5)·[default=5].</p> 
241 </dd></dl> 
  
242 <dl·class="attribute"> 
243 <dt·id="uves_obs_redchain.param.uves_cal_mdark.stack_method"> 
244 <code·class="descclassname">uves_obs_redchain.param.uves_cal_mdark.</code><code·class="descname">stack_method</code><a·class="headerlink"·href="#uves_obs_redchain.param.uves_cal_mdark.stack_method"·title="Permalink·to·this·definition">¶</a></dt> 
245 <dd><p>Method·used·to·build·master·frame··(str;·default:·‘median’)·[default=”median”].</p> 
246 </dd></dl> 
  
247 <dl·class="attribute"> 
248 <dt·id="uves_obs_redchain.param.uves_cal_mdark.klow"> 
249 <code·class="descclassname">uves_obs_redchain.param.uves_cal_mdark.</code><code·class="descname">klow</code><a·class="headerlink"·href="#uves_obs_redchain.param.uves_cal_mdark.klow"·title="Permalink·to·this·definition">¶</a></dt> 
250 <dd><p>Kappa·used·to·clip·low·level·values,·when·method·is·set·to·‘mean’··(float;·default:·5.0)·[default=5.0].</p> 
251 </dd></dl> 
  
252 <dl·class="attribute"> 
253 <dt·id="uves_obs_redchain.param.uves_cal_mdark.khigh"> 
254 <code·class="descclassname">uves_obs_redchain.param.uves_cal_mdark.</code><code·class="descname">khigh</code><a·class="headerlink"·href="#uves_obs_redchain.param.uves_cal_mdark.khigh"·title="Permalink·to·this·definition">¶</a></dt> 
255 <dd><p>Kappa·used·to·clip·high·level·values,·when·method·is·set·to·‘mean’··(float;·default:·5.0)·[default=5.0].</p> 
256 </dd></dl> 
  
257 <dl·class="attribute"> 
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185 file·is·\fBflames_cal_wavecal.calibrate.tolerance\fR·[default·=·\fI0.6\fR].185 file·is·\fBflames_cal_wavecal.calibrate.tolerance\fR·[default·=·\fI0.6\fR].
186 .TP186 .TP
187 \fB\-\-kappa\fR·\fI<float>\fR187 \fB\-\-kappa\fR·\fI<float>\fR
188 Lines·with·residuals·more·then·kappa·stdev·are·rejected·from·the·final188 Lines·with·residuals·more·then·kappa·stdev·are·rejected·from·the·final
189 fit·(float;·default:·4.0).·The·full·name·of·this·option·for·the·EsoRex·configuration189 fit·(float;·default:·4.0).·The·full·name·of·this·option·for·the·EsoRex·configuration
190 file·is·\fBflames_cal_wavecal.calibrate.kappa\fR·[default·=·\fI4.0\fR].190 file·is·\fBflames_cal_wavecal.calibrate.kappa\fR·[default·=·\fI4.0\fR].
191 .TP191 .TP
 192 \fB\-\-rebin.wavestep\fR·\fI<float>\fR
 193 The·bin·size·(in·w.l.u.)·in·wavelength·space.·If·negative,·a·step·size
 194 of·2/3·*·(·average·pixel·size·)·is·used.·(float;·default:·\-1.0).·The·full·name·of·this·option·for·the·EsoRex·configuration
 195 file·is·\fBflames_cal_wavecal.rebin.wavestep\fR·[default·=·\fI\-1.0\fR].
 196 .TP
 197 \fB\-\-rebin.scale\fR·\fI<bool>\fR
 198 Whether·or·not·to·multiply·by·the·factor·dx/dlambda·(pixels·per
 199 wavelength)·during·the·rebinning.·This·option·is·disabled·as·default
 200 in·concordance·with·the·method·used·in·the·MIDAS·pipeline.·This·option
 201 should·be·set·to·true·to·convert·the·observed·flux·(in·pixel\-space)·to
 202 a·flux·per·wavelength·(in·wavelength\-space).·(bool;·default:·False).·The·full·name·of·this·option·for·the·EsoRex·configuration
 203 file·is·\fBflames_cal_wavecal.rebin.scale\fR·[default·=·\fIFalse\fR].
 204 .TP
192 \fB\-\-extract.method\fR·\fI<str>\fR205 \fB\-\-extract.method\fR·\fI<str>\fR
193 Extraction·method.·(2d/optimal·not·supported·by·uves_cal_wavecal,206 Extraction·method.·(2d/optimal·not·supported·by·uves_cal_wavecal,
194 weighted·supported·only·by·uves_cal_wavecal,·2d·not·supported·by207 weighted·supported·only·by·uves_cal_wavecal,·2d·not·supported·by
195 uves_cal_response)·(str;·default:·\'average\').·The·full·name·of·this·option·for·the·EsoRex·configuration208 uves_cal_response)·(str;·default:·\'average\').·The·full·name·of·this·option·for·the·EsoRex·configuration
196 file·is·\fBflames_cal_wavecal.extract.method\fR·[default·=·\fIaverage\fR].209 file·is·\fBflames_cal_wavecal.extract.method\fR·[default·=·\fIaverage\fR].
197 .TP210 .TP
198 \fB\-\-extract.kappa\fR·\fI<float>\fR211 \fB\-\-extract.kappa\fR·\fI<float>\fR
Offset 245, 27 lines modifiedOffset 258, 14 lines modified
245 (optimal·extraction·only)·If·false·(fastest),·the·spectrum·is258 (optimal·extraction·only)·If·false·(fastest),·the·spectrum·is
246 extracted·only·once.·If·true·(best),·the·spectrum·is·extracted·twice,259 extracted·only·once.·If·true·(best),·the·spectrum·is·extracted·twice,
247 the·second·time·using·improved·variance·estimates·based·on·the·first260 the·second·time·using·improved·variance·estimates·based·on·the·first
248 iteration.·Better·variance·estimates·slightly·improve·the·obtained261 iteration.·Better·variance·estimates·slightly·improve·the·obtained
249 signal·to·noise·but·at·the·cost·of·increased·execution·time·(bool;262 signal·to·noise·but·at·the·cost·of·increased·execution·time·(bool;
250 default:·True).·The·full·name·of·this·option·for·the·EsoRex·configuration263 default:·True).·The·full·name·of·this·option·for·the·EsoRex·configuration
251 file·is·\fBflames_cal_wavecal.extract.best\fR·[default·=·\fITrue\fR].264 file·is·\fBflames_cal_wavecal.extract.best\fR·[default·=·\fITrue\fR].
252 .TP 
253 \fB\-\-rebin.wavestep\fR·\fI<float>\fR 
254 The·bin·size·(in·w.l.u.)·in·wavelength·space.·If·negative,·a·step·size 
255 of·2/3·*·(·average·pixel·size·)·is·used.·(float;·default:·\-1.0).·The·full·name·of·this·option·for·the·EsoRex·configuration 
256 file·is·\fBflames_cal_wavecal.rebin.wavestep\fR·[default·=·\fI\-1.0\fR]. 
257 .TP 
258 \fB\-\-rebin.scale\fR·\fI<bool>\fR 
259 Whether·or·not·to·multiply·by·the·factor·dx/dlambda·(pixels·per 
260 wavelength)·during·the·rebinning.·This·option·is·disabled·as·default 
261 in·concordance·with·the·method·used·in·the·MIDAS·pipeline.·This·option 
262 should·be·set·to·true·to·convert·the·observed·flux·(in·pixel\-space)·to 
263 a·flux·per·wavelength·(in·wavelength\-space).·(bool;·default:·False).·The·full·name·of·this·option·for·the·EsoRex·configuration 
264 file·is·\fBflames_cal_wavecal.rebin.scale\fR·[default·=·\fIFalse\fR]. 
  
265 .PP265 .PP
266 Note·that·it·is·possible·to·create·a·configuration·file·containing·these266 Note·that·it·is·possible·to·create·a·configuration·file·containing·these
267 options,·along·with·suitable·default·values.·Please·refer·to·the·details267 options,·along·with·suitable·default·values.·Please·refer·to·the·details
268 provided·by·the·'esorex·\-\-help'·command.268 provided·by·the·'esorex·\-\-help'·command.
  
269 .SH·SEE·ALSO269 .SH·SEE·ALSO
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./usr/share/man/man7/flames_obs_redchain.7.gz
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flames_obs_redchain.7
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112 file·is·\fBflames_obs_redchain.flames_cal_predict.kappa\fR·[default·=·\fI4.5\fR].112 file·is·\fBflames_obs_redchain.flames_cal_predict.kappa\fR·[default·=·\fI4.5\fR].
113 .TP113 .TP
114 \fB\-\-flames_cal_predict.tol\fR·\fI<float>\fR114 \fB\-\-flames_cal_predict.tol\fR·\fI<float>\fR
115 Tolerance·in·kappa·sigma·clipping·on·RESIDUAL·between·YFIT·and·Y115 Tolerance·in·kappa·sigma·clipping·on·RESIDUAL·between·YFIT·and·Y
116 columns·(float;·default:·2.0).·The·full·name·of·this·option·for·the·EsoRex·configuration116 columns·(float;·default:·2.0).·The·full·name·of·this·option·for·the·EsoRex·configuration
117 file·is·\fBflames_obs_redchain.flames_cal_predict.tol\fR·[default·=·\fI2.0\fR].117 file·is·\fBflames_obs_redchain.flames_cal_predict.tol\fR·[default·=·\fI2.0\fR].
118 .TP118 .TP
 119 \fB\-\-flames_cal_prep_sff_ofpos.ext_method\fR·\fI<str>\fR
 120 Extraction·method·(str;·default:·\'opt\').·The·full·name·of·this·option·for·the·EsoRex·configuration
 121 file·is·\fBflames_obs_redchain.flames_cal_prep_sff_ofpos.ext_method\fR·[default·=·\fIopt\fR].
 122 .TP
 123 \fB\-\-flames_cal_prep_sff_ofpos.bias_method\fR·\fI<str>\fR
 124 Bias·subtraction·method,·M·for·master·bias·frame,·N·for·no·bias
 125 subtraction,·V·to·subtract·a·constant·bias·level·defined·by·the
 126 parameter·bias_value·(str;·default:·\'M\').·The·full·name·of·this·option·for·the·EsoRex·configuration
 127 file·is·\fBflames_obs_redchain.flames_cal_prep_sff_ofpos.bias_method\fR·[default·=·\fIM\fR].
 128 .TP
 129 \fB\-\-flames_cal_prep_sff_ofpos.bias_value\fR·\fI<int>\fR
 130 Bias·value·(only·if·bias_method·=·V)·(int;·default:·200).·The·full·name·of·this·option·for·the·EsoRex·configuration
 131 file·is·\fBflames_obs_redchain.flames_cal_prep_sff_ofpos.bias_value\fR·[default·=·\fI200\fR].
 132 .TP
 133 \fB\-\-flames_cal_prep_sff_ofpos.filter_switch\fR·\fI<str>\fR
 134 Filter·switch·(str;·default:·\'none\').·The·full·name·of·this·option·for·the·EsoRex·configuration
 135 file·is·\fBflames_obs_redchain.flames_cal_prep_sff_ofpos.filter_switch\fR·[default·=·\fInone\fR].
 136 .TP
 137 \fB\-\-flames_cal_prep_sff_ofpos.sat_thr\fR·\fI<int>\fR
 138 Saturation·threshold·(int;·default:·55000).·The·full·name·of·this·option·for·the·EsoRex·configuration
 139 file·is·\fBflames_obs_redchain.flames_cal_prep_sff_ofpos.sat_thr\fR·[default·=·\fI55000\fR].
 140 .TP
 141 \fB\-\-flames_cal_prep_sff_ofpos.fileprep\fR·\fI<bool>\fR
 142 Slitff*·and·Fibreff*·file·preparation.·If·fast·extraction·method·is
 143 used·it·should·be·set·to·FALSE·(bool;·default:·True).·The·full·name·of·this·option·for·the·EsoRex·configuration
 144 file·is·\fBflames_obs_redchain.flames_cal_prep_sff_ofpos.fileprep\fR·[default·=·\fITrue\fR].
 145 .TP
 146 \fB\-\-flames_cal_prep_sff_ofpos.cubify\fR·\fI<bool>\fR
 147 Cubify·switch·(bool;·default:·True).·The·full·name·of·this·option·for·the·EsoRex·configuration
 148 file·is·\fBflames_obs_redchain.flames_cal_prep_sff_ofpos.cubify\fR·[default·=·\fITrue\fR].
 149 .TP
 150 \fB\-\-flames_cal_prep_sff_ofpos.save_flat_size\fR·\fI<int>\fR
 151 To·be·sure·to·use·the·flat·part·of·a·slit·flatsone·may·need·to
 152 subtract·this·bit.·The·default·value·\-1,·is·used·for·automatic
 153 setting:·if·WCEN=520·save_flat_size=0,·else·save_flat_size=2.·Values
 154 explicitly·set·by·user·overwrite·this·rule.·(int;·default:·\-1).·The·full·name·of·this·option·for·the·EsoRex·configuration
 155 file·is·\fBflames_obs_redchain.flames_cal_prep_sff_ofpos.save_flat_size\fR·[default·=·\fI\-1\fR].
 156 .TP
 157 \fB\-\-flames_cal_prep_sff_ofpos.clean_tmp_products\fR·\fI<bool>\fR
 158 Input·data·format·(bool;·default:·False).·The·full·name·of·this·option·for·the·EsoRex·configuration
 159 file·is·\fBflames_obs_redchain.flames_cal_prep_sff_ofpos.clean_tmp_products\fR·[default·=·\fIFalse\fR].
 160 .TP
119 \fB\-\-uves_cal_mflat.norm_method\fR·\fI<str>\fR161 \fB\-\-uves_cal_mflat.norm_method\fR·\fI<str>\fR
120 Method·used·to·build·master·frame··(str;·default:·\'explevel\').·The·full·name·of·this·option·for·the·EsoRex·configuration162 Method·used·to·build·master·frame··(str;·default:·\'explevel\').·The·full·name·of·this·option·for·the·EsoRex·configuration
121 file·is·\fBflames_obs_redchain.uves_cal_mflat.norm_method\fR·[default·=·\fIexplevel\fR].163 file·is·\fBflames_obs_redchain.uves_cal_mflat.norm_method\fR·[default·=·\fIexplevel\fR].
122 .TP164 .TP
123 \fB\-\-uves_cal_mflat.backsub.mmethod\fR·\fI<str>\fR165 \fB\-\-uves_cal_mflat.backsub.mmethod\fR·\fI<str>\fR
124 Background·measuring·method.·If·equal·to·\'median\'·the·background·is166 Background·measuring·method.·If·equal·to·\'median\'·the·background·is
125 sampled·using·the·median·of·a·subwindow.·If·\'minimum\',·the·subwindow167 sampled·using·the·median·of·a·subwindow.·If·\'minimum\',·the·subwindow
Offset 156, 14 lines modifiedOffset 198, 85 lines modified
156 y\-radius·of·the·post\-smoothing·window·is·(smoothy·*·image_height).198 y\-radius·of·the·post\-smoothing·window·is·(smoothy·*·image_height).
157 Here,·\'image_height\'·is·the·image·height·after·binning.·If·negative,199 Here,·\'image_height\'·is·the·image·height·after·binning.·If·negative,
158 the·default·values·are·used:·(100.0/2048)·for·blue·flat\-field·frames,200 the·default·values·are·used:·(100.0/2048)·for·blue·flat\-field·frames,
159 (300.0/2048)·for·red·flat\-field·frames,·(200.0/2048)·for·blue·science201 (300.0/2048)·for·red·flat\-field·frames,·(200.0/2048)·for·blue·science
160 frames·and·(500.0/2048)·for·red·science·frames.·(float;·default:·\-1.0).·The·full·name·of·this·option·for·the·EsoRex·configuration202 frames·and·(500.0/2048)·for·red·science·frames.·(float;·default:·\-1.0).·The·full·name·of·this·option·for·the·EsoRex·configuration
161 file·is·\fBflames_obs_redchain.uves_cal_mflat.backsub.smoothy\fR·[default·=·\fI\-1.0\fR].203 file·is·\fBflames_obs_redchain.uves_cal_mflat.backsub.smoothy\fR·[default·=·\fI\-1.0\fR].
162 .TP204 .TP
 205 \fB\-\-uves_cal_mdark.stack_method\fR·\fI<str>\fR
 206 Method·used·to·build·master·frame··(str;·default:·\'median\').·The·full·name·of·this·option·for·the·EsoRex·configuration
 207 file·is·\fBflames_obs_redchain.uves_cal_mdark.stack_method\fR·[default·=·\fImedian\fR].
 208 .TP
 209 \fB\-\-uves_cal_mdark.klow\fR·\fI<float>\fR
 210 Kappa·used·to·clip·low·level·values,·when·method·is·set·to·\'mean\'
 211 (float;·default:·5.0).·The·full·name·of·this·option·for·the·EsoRex·configuration
 212 file·is·\fBflames_obs_redchain.uves_cal_mdark.klow\fR·[default·=·\fI5.0\fR].
 213 .TP
 214 \fB\-\-uves_cal_mdark.khigh\fR·\fI<float>\fR
 215 Kappa·used·to·clip·high·level·values,·when·method·is·set·to·\'mean\'
 216 (float;·default:·5.0).·The·full·name·of·this·option·for·the·EsoRex·configuration
 217 file·is·\fBflames_obs_redchain.uves_cal_mdark.khigh\fR·[default·=·\fI5.0\fR].
 218 .TP
 219 \fB\-\-uves_cal_mdark.niter\fR·\fI<int>\fR
 220 Number·of·kappa·sigma·iterations,·when·method·is·set·to·\'mean\'··(int;
 221 default:·5).·The·full·name·of·this·option·for·the·EsoRex·configuration
 222 file·is·\fBflames_obs_redchain.uves_cal_mdark.niter\fR·[default·=·\fI5\fR].
 223 .TP
 224 \fB\-\-uves_cal_mdark.stack_method\fR·\fI<str>\fR
 225 Method·used·to·build·master·frame··(str;·default:·\'median\').·The·full·name·of·this·option·for·the·EsoRex·configuration
 226 file·is·\fBflames_obs_redchain.uves_cal_mdark.stack_method\fR·[default·=·\fImedian\fR].
 227 .TP
 228 \fB\-\-uves_cal_mdark.klow\fR·\fI<float>\fR
 229 Kappa·used·to·clip·low·level·values,·when·method·is·set·to·\'mean\'
 230 (float;·default:·5.0).·The·full·name·of·this·option·for·the·EsoRex·configuration
 231 file·is·\fBflames_obs_redchain.uves_cal_mdark.klow\fR·[default·=·\fI5.0\fR].
 232 .TP
 233 \fB\-\-uves_cal_mdark.khigh\fR·\fI<float>\fR
 234 Kappa·used·to·clip·high·level·values,·when·method·is·set·to·\'mean\'
 235 (float;·default:·5.0).·The·full·name·of·this·option·for·the·EsoRex·configuration
 236 file·is·\fBflames_obs_redchain.uves_cal_mdark.khigh\fR·[default·=·\fI5.0\fR].
 237 .TP
 238 \fB\-\-uves_cal_mdark.niter\fR·\fI<int>\fR
 239 Number·of·kappa·sigma·iterations,·when·method·is·set·to·\'mean\'··(int;
 240 default:·5).·The·full·name·of·this·option·for·the·EsoRex·configuration
 241 file·is·\fBflames_obs_redchain.uves_cal_mdark.niter\fR·[default·=·\fI5\fR].
 242 .TP
 243 \fB\-\-uves_cal_mdark.qc_dark.reg.num_x\fR·\fI<int>\fR
 244 Number·of·regions·along·the·X·axis·(where·mean/med/rms·are·computed).
 245 (int;·default:·4).·The·full·name·of·this·option·for·the·EsoRex·configuration
 246 file·is·\fBflames_obs_redchain.uves_cal_mdark.qc_dark.reg.num_x\fR·[default·=·\fI4\fR].
 247 .TP
 248 \fB\-\-uves_cal_mdark.qc_dark.reg.num_y\fR·\fI<int>\fR
 249 Number·of·regions·along·the·Y·axis(where·mean/med/rms·are·computed).
 250 (int;·default:·4).·The·full·name·of·this·option·for·the·EsoRex·configuration
 251 file·is·\fBflames_obs_redchain.uves_cal_mdark.qc_dark.reg.num_y\fR·[default·=·\fI4\fR].
 252 .TP
 253 \fB\-\-uves_cal_mdark.qc_dark.reg.box_sx\fR·\fI<int>\fR
 254 Region·X·size·[pix]·(int;·default:·100).·The·full·name·of·this·option·for·the·EsoRex·configuration
 255 file·is·\fBflames_obs_redchain.uves_cal_mdark.qc_dark.reg.box_sx\fR·[default·=·\fI100\fR].
 256 .TP
 257 \fB\-\-uves_cal_mdark.qc_dark.reg.box_sy\fR·\fI<int>\fR
 258 Region·Y·size·[pix]·(int;·default:·100).·The·full·name·of·this·option·for·the·EsoRex·configuration
 259 file·is·\fBflames_obs_redchain.uves_cal_mdark.qc_dark.reg.box_sy\fR·[default·=·\fI100\fR].
 260 .TP
 261 \fB\-\-uves_cal_mdark.qc_dark.reg.border_x\fR·\fI<int>\fR
 262 X·distance·between·the·left·hand·side·of·the·detector·and·the·left
 263 hand·side·of·the·region·[pix]·(int;·default:·100).·The·full·name·of·this·option·for·the·EsoRex·configuration
 264 file·is·\fBflames_obs_redchain.uves_cal_mdark.qc_dark.reg.border_x\fR·[default·=·\fI100\fR].
 265 .TP
 266 \fB\-\-uves_cal_mdark.qc_dark.reg.border_y\fR·\fI<int>\fR
 267 X·distance·between·the·left·hand·side·of·the·detector·and·the·left
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./usr/share/man/man7/uves_cal_response.7.gz
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uves_cal_response.7
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68 .TP68 .TP
69 \fB\-\-paccuracy\fR·\fI<float>\fR69 \fB\-\-paccuracy\fR·\fI<float>\fR
70 The·pointing·accuracy·(in·arcseconds)·used·to·identify·the·observed70 The·pointing·accuracy·(in·arcseconds)·used·to·identify·the·observed
71 star·with·a·catalogue·star.·If·the·angular·separation·is·less·than71 star·with·a·catalogue·star.·If·the·angular·separation·is·less·than
72 this·number,·the·identification·is·made.·(float;·default:·60.0).·The·full·name·of·this·option·for·the·EsoRex·configuration72 this·number,·the·identification·is·made.·(float;·default:·60.0).·The·full·name·of·this·option·for·the·EsoRex·configuration
73 file·is·\fBuves_cal_response.efficiency.paccuracy\fR·[default·=·\fI60.0\fR].73 file·is·\fBuves_cal_response.efficiency.paccuracy\fR·[default·=·\fI60.0\fR].
74 .TP74 .TP
75 \fB\-\-efficiency.reduce.ffmethod\fR·\fI<str>\fR 
76 Flat\-fielding·method.·If·set·to·\'pixel\',·flat\-fielding·is·done·in 
77 pixel\-pixel·space·(before·extraction);·if·set·to·\'extract\',·flat\- 
78 fielding·is·performed·in·pixel\-order·space·(i.e.·after·extraction).·If 
79 set·to·\'no\',·no·flat\-field·correction·is·done.·<pixel·|·extract·|·no> 
80 (str;·default:·\'no\').·The·full·name·of·this·option·for·the·EsoRex·configuration 
81 file·is·\fBuves_cal_response.efficiency.reduce.ffmethod\fR·[default·=·\fIno\fR]. 
82 .TP 
83 \fB\-\-efficiency.reduce.merge\fR·\fI<str>\fR 
84 Order·merging·method.·If·\'optimal\',·the·flux·in·the·overlapping·region 
85 is·set·to·the·(optimally·computed,·using·the·uncertainties)·average·of 
86 single·order·spectra.·If·\'sum\',·the·flux·in·the·overlapping·region·is 
87 computed·as·the·sum·of·the·single·order·spectra.If·\'noappend\'·the 
88 spectrum·is·simply·rebinned·but·not·merged.If·flat\-fielding·is·done, 
89 method·\'optimal\'·is·recommended,·otherwise·\'sum\'.·<optimal·|·sum·| 
90 noappend>·(str;·default:·\'sum\').·The·full·name·of·this·option·for·the·EsoRex·configuration 
91 file·is·\fBuves_cal_response.efficiency.reduce.merge\fR·[default·=·\fIsum\fR]. 
92 .TP 
93 \fB\-\-efficiency.reduce.best\fR·\fI<bool>\fR 
94 (optimal·extraction·only)·If·false·(fastest),·the·spectrum·is 
95 extracted·only·once.·If·true·(best),·the·spectrum·is·extracted·twice, 
96 the·second·time·using·improved·variance·estimates·based·on·the·first 
97 iteration.·Better·variance·estimates·slightly·improve·the·obtained 
98 signal·to·noise·but·at·the·cost·of·increased·execution·time·(bool; 
99 default:·True).·The·full·name·of·this·option·for·the·EsoRex·configuration 
100 file·is·\fBuves_cal_response.efficiency.reduce.best\fR·[default·=·\fITrue\fR]. 
101 .TP 
102 \fB\-\-efficiency.reduce.extract.method\fR·\fI<str>\fR 
103 Extraction·method.·<average·|·linear·|·weighted·|·optimal>·(str; 
104 default:·\'linear\').·The·full·name·of·this·option·for·the·EsoRex·configuration 
105 file·is·\fBuves_cal_response.efficiency.reduce.extract.method\fR·[default·=·\fIlinear\fR]. 
106 .TP 
107 \fB\-\-reduce.slitlength\fR·\fI<float>\fR75 \fB\-\-reduce.slitlength\fR·\fI<float>\fR
108 Extraction·slit·length·(in·pixels).·If·negative,·the·value·inferred76 Extraction·slit·length·(in·pixels).·If·negative,·the·value·inferred
109 from·the·raw·frame·header·is·used·(float;·default:·\-1.0).·The·full·name·of·this·option·for·the·EsoRex·configuration77 from·the·raw·frame·header·is·used·(float;·default:·\-1.0).·The·full·name·of·this·option·for·the·EsoRex·configuration
110 file·is·\fBuves_cal_response.reduce.slitlength\fR·[default·=·\fI\-1.0\fR].78 file·is·\fBuves_cal_response.reduce.slitlength\fR·[default·=·\fI\-1.0\fR].
111 .TP79 .TP
112 \fB\-\-reduce.skysub\fR·\fI<bool>\fR80 \fB\-\-reduce.skysub\fR·\fI<bool>\fR
113 Do·sky\-subtraction·(only·applicable·to·linear·and·average81 Do·sky\-subtraction·(only·applicable·to·linear·and·average
Offset 169, 54 lines modifiedOffset 137, 14 lines modified
169 \fB\-\-reduce.merge_delt2\fR·\fI<float>\fR137 \fB\-\-reduce.merge_delt2\fR·\fI<float>\fR
170 Order·merging·right·hand·(long·wavelength)·cut.·To·reduce·the·amount138 Order·merging·right·hand·(long·wavelength)·cut.·To·reduce·the·amount
171 of·order·overlapping·regions·we·allow·to·cut·short·and·long·wavelength139 of·order·overlapping·regions·we·allow·to·cut·short·and·long·wavelength
172 ranges.·This·may·reduce·the·ripple·possibly·introduced·by·the·order140 ranges.·This·may·reduce·the·ripple·possibly·introduced·by·the·order
173 merging.·Suggested·values·is·4·(float;·default:·0.0).·The·full·name·of·this·option·for·the·EsoRex·configuration141 merging.·Suggested·values·is·4·(float;·default:·0.0).·The·full·name·of·this·option·for·the·EsoRex·configuration
174 file·is·\fBuves_cal_response.reduce.merge_delt2\fR·[default·=·\fI0.0\fR].142 file·is·\fBuves_cal_response.reduce.merge_delt2\fR·[default·=·\fI0.0\fR].
175 .TP143 .TP
176 \fB\-\-reduce.backsub.mmethod\fR·\fI<str>\fR 
177 Background·measuring·method.·If·equal·to·\'median\'·the·background·is 
178 sampled·using·the·median·of·a·subwindow.·If·\'minimum\',·the·subwindow 
179 minimum·value·is·used.·If·\'no\',·no·background·subtraction·is·done. 
180 (str;·default:·\'median\').·The·full·name·of·this·option·for·the·EsoRex·configuration 
181 file·is·\fBuves_cal_response.reduce.backsub.mmethod\fR·[default·=·\fImedian\fR]. 
182 .TP 
183 \fB\-\-reduce.backsub.npoints\fR·\fI<int>\fR 
184 This·is·the·number·of·columns·in·interorder·space·used·to·sample·the 
185 background.·(int;·default:·82).·The·full·name·of·this·option·for·the·EsoRex·configuration 
186 file·is·\fBuves_cal_response.reduce.backsub.npoints\fR·[default·=·\fI82\fR]. 
187 .TP 
188 \fB\-\-reduce.backsub.radiusy\fR·\fI<int>\fR 
189 The·height·(in·pixels)·of·the·background·sampling·window·is·(2*radiusy 
190 +·1).·This·parameter·is·not·corrected·for·binning.·(int;·default:·2).·The·full·name·of·this·option·for·the·EsoRex·configuration 
191 file·is·\fBuves_cal_response.reduce.backsub.radiusy\fR·[default·=·\fI2\fR]. 
192 .TP 
193 \fB\-\-reduce.backsub.sdegree\fR·\fI<int>\fR 
194 Degree·of·interpolating·splines.·Currently·only·degree·=·1·is 
195 supported·(int;·default:·1).·The·full·name·of·this·option·for·the·EsoRex·configuration 
196 file·is·\fBuves_cal_response.reduce.backsub.sdegree\fR·[default·=·\fI1\fR]. 
197 .TP 
198 \fB\-\-reduce.backsub.smoothx\fR·\fI<float>\fR 
199 If·spline·interpolation·is·used·to·measure·the·background,·the 
200 x\-radius·of·the·post\-smoothing·window·is·(smoothx·*·image_width). 
201 Here,·\'image_width\'·is·the·image·width·after·binning.·If·negative,·the 
202 default·values·are·used:·(25.0/4096)·for·blue·flat\-field·frames, 
203 (50.0/4096)·for·red·flat\-field·frames,·(300.0/4096)·for·blue·science 
204 frames·and·(300.0/4096)·for·red·science·frames.·(float;·default:·\-1.0).·The·full·name·of·this·option·for·the·EsoRex·configuration 
205 file·is·\fBuves_cal_response.reduce.backsub.smoothx\fR·[default·=·\fI\-1.0\fR]. 
206 .TP 
207 \fB\-\-reduce.backsub.smoothy\fR·\fI<float>\fR 
208 If·spline·interpolation·is·used·to·measure·the·background,·the 
209 y\-radius·of·the·post\-smoothing·window·is·(smoothy·*·image_height). 
210 Here,·\'image_height\'·is·the·image·height·after·binning.·If·negative, 
211 the·default·values·are·used:·(100.0/2048)·for·blue·flat\-field·frames, 
212 (300.0/2048)·for·red·flat\-field·frames,·(200.0/2048)·for·blue·science 
213 frames·and·(500.0/2048)·for·red·science·frames.·(float;·default:·\-1.0).·The·full·name·of·this·option·for·the·EsoRex·configuration 
214 file·is·\fBuves_cal_response.reduce.backsub.smoothy\fR·[default·=·\fI\-1.0\fR]. 
215 .TP 
216 \fB\-\-reduce.rebin.wavestep\fR·\fI<float>\fR144 \fB\-\-reduce.rebin.wavestep\fR·\fI<float>\fR
217 The·bin·size·(in·w.l.u.)·in·wavelength·space.·If·negative,·a·step·size145 The·bin·size·(in·w.l.u.)·in·wavelength·space.·If·negative,·a·step·size
218 of·2/3·*·(·average·pixel·size·)·is·used.·(float;·default:·\-1.0).·The·full·name·of·this·option·for·the·EsoRex·configuration146 of·2/3·*·(·average·pixel·size·)·is·used.·(float;·default:·\-1.0).·The·full·name·of·this·option·for·the·EsoRex·configuration
219 file·is·\fBuves_cal_response.reduce.rebin.wavestep\fR·[default·=·\fI\-1.0\fR].147 file·is·\fBuves_cal_response.reduce.rebin.wavestep\fR·[default·=·\fI\-1.0\fR].
220 .TP148 .TP
221 \fB\-\-reduce.rebin.scale\fR·\fI<bool>\fR149 \fB\-\-reduce.rebin.scale\fR·\fI<bool>\fR
222 Whether·or·not·to·multiply·by·the·factor·dx/dlambda·(pixels·per150 Whether·or·not·to·multiply·by·the·factor·dx/dlambda·(pixels·per
Offset 282, 14 lines modifiedOffset 210, 86 lines modified
282 (optimal·extraction·only)·If·false·(fastest),·the·spectrum·is210 (optimal·extraction·only)·If·false·(fastest),·the·spectrum·is
283 extracted·only·once.·If·true·(best),·the·spectrum·is·extracted·twice,211 extracted·only·once.·If·true·(best),·the·spectrum·is·extracted·twice,
284 the·second·time·using·improved·variance·estimates·based·on·the·first212 the·second·time·using·improved·variance·estimates·based·on·the·first
285 iteration.·Better·variance·estimates·slightly·improve·the·obtained213 iteration.·Better·variance·estimates·slightly·improve·the·obtained
286 signal·to·noise·but·at·the·cost·of·increased·execution·time·(bool;214 signal·to·noise·but·at·the·cost·of·increased·execution·time·(bool;
287 default:·True).·The·full·name·of·this·option·for·the·EsoRex·configuration215 default:·True).·The·full·name·of·this·option·for·the·EsoRex·configuration
288 file·is·\fBuves_cal_response.reduce.extract.best\fR·[default·=·\fITrue\fR].216 file·is·\fBuves_cal_response.reduce.extract.best\fR·[default·=·\fITrue\fR].
 217 .TP
 218 \fB\-\-reduce.backsub.mmethod\fR·\fI<str>\fR
 219 Background·measuring·method.·If·equal·to·\'median\'·the·background·is
 220 sampled·using·the·median·of·a·subwindow.·If·\'minimum\',·the·subwindow
 221 minimum·value·is·used.·If·\'no\',·no·background·subtraction·is·done.
 222 (str;·default:·\'median\').·The·full·name·of·this·option·for·the·EsoRex·configuration
 223 file·is·\fBuves_cal_response.reduce.backsub.mmethod\fR·[default·=·\fImedian\fR].
 224 .TP
 225 \fB\-\-reduce.backsub.npoints\fR·\fI<int>\fR
 226 This·is·the·number·of·columns·in·interorder·space·used·to·sample·the
 227 background.·(int;·default:·82).·The·full·name·of·this·option·for·the·EsoRex·configuration
 228 file·is·\fBuves_cal_response.reduce.backsub.npoints\fR·[default·=·\fI82\fR].
 229 .TP
 230 \fB\-\-reduce.backsub.radiusy\fR·\fI<int>\fR
 231 The·height·(in·pixels)·of·the·background·sampling·window·is·(2*radiusy
 232 +·1).·This·parameter·is·not·corrected·for·binning.·(int;·default:·2).·The·full·name·of·this·option·for·the·EsoRex·configuration
 233 file·is·\fBuves_cal_response.reduce.backsub.radiusy\fR·[default·=·\fI2\fR].
 234 .TP
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12.2 KB
uves_cal_tflat.7
Ordering differences only
    
Offset 50, 54 lines modifiedOffset 50, 14 lines modified
50 hard\-coded·(as·function·of·UVES·chip).·(bool;·default:·False).·The·full·name·of·this·option·for·the·EsoRex·configuration50 hard\-coded·(as·function·of·UVES·chip).·(bool;·default:·False).·The·full·name·of·this·option·for·the·EsoRex·configuration
51 file·is·\fBuves_cal_tflat.clean_traps\fR·[default·=·\fIFalse\fR].51 file·is·\fBuves_cal_tflat.clean_traps\fR·[default·=·\fIFalse\fR].
52 .TP52 .TP
53 \fB\-\-norm_method\fR·\fI<str>\fR53 \fB\-\-norm_method\fR·\fI<str>\fR
54 Method·used·to·build·master·frame··(str;·default:·\'explevel\').·The·full·name·of·this·option·for·the·EsoRex·configuration54 Method·used·to·build·master·frame··(str;·default:·\'explevel\').·The·full·name·of·this·option·for·the·EsoRex·configuration
55 file·is·\fBuves_cal_tflat.norm_method\fR·[default·=·\fIexplevel\fR].55 file·is·\fBuves_cal_tflat.norm_method\fR·[default·=·\fIexplevel\fR].
56 .TP56 .TP
57 \fB\-\-backsub.mmethod\fR·\fI<str>\fR 
58 Background·measuring·method.·If·equal·to·\'median\'·the·background·is 
59 sampled·using·the·median·of·a·subwindow.·If·\'minimum\',·the·subwindow 
60 minimum·value·is·used.·If·\'no\',·no·background·subtraction·is·done. 
61 (str;·default:·\'median\').·The·full·name·of·this·option·for·the·EsoRex·configuration 
62 file·is·\fBuves_cal_tflat.backsub.mmethod\fR·[default·=·\fImedian\fR]. 
63 .TP 
64 \fB\-\-backsub.npoints\fR·\fI<int>\fR 
65 This·is·the·number·of·columns·in·interorder·space·used·to·sample·the 
66 background.·(int;·default:·82).·The·full·name·of·this·option·for·the·EsoRex·configuration 
67 file·is·\fBuves_cal_tflat.backsub.npoints\fR·[default·=·\fI82\fR]. 
68 .TP 
69 \fB\-\-backsub.radiusy\fR·\fI<int>\fR 
70 The·height·(in·pixels)·of·the·background·sampling·window·is·(2*radiusy 
71 +·1).·This·parameter·is·not·corrected·for·binning.·(int;·default:·2).·The·full·name·of·this·option·for·the·EsoRex·configuration 
72 file·is·\fBuves_cal_tflat.backsub.radiusy\fR·[default·=·\fI2\fR]. 
73 .TP 
74 \fB\-\-backsub.sdegree\fR·\fI<int>\fR 
75 Degree·of·interpolating·splines.·Currently·only·degree·=·1·is 
76 supported·(int;·default:·1).·The·full·name·of·this·option·for·the·EsoRex·configuration 
77 file·is·\fBuves_cal_tflat.backsub.sdegree\fR·[default·=·\fI1\fR]. 
78 .TP 
79 \fB\-\-backsub.smoothx\fR·\fI<float>\fR 
80 If·spline·interpolation·is·used·to·measure·the·background,·the 
81 x\-radius·of·the·post\-smoothing·window·is·(smoothx·*·image_width). 
82 Here,·\'image_width\'·is·the·image·width·after·binning.·If·negative,·the 
83 default·values·are·used:·(25.0/4096)·for·blue·flat\-field·frames, 
84 (50.0/4096)·for·red·flat\-field·frames,·(300.0/4096)·for·blue·science 
85 frames·and·(300.0/4096)·for·red·science·frames.·(float;·default:·\-1.0).·The·full·name·of·this·option·for·the·EsoRex·configuration 
86 file·is·\fBuves_cal_tflat.backsub.smoothx\fR·[default·=·\fI\-1.0\fR]. 
87 .TP 
88 \fB\-\-backsub.smoothy\fR·\fI<float>\fR 
89 If·spline·interpolation·is·used·to·measure·the·background,·the 
90 y\-radius·of·the·post\-smoothing·window·is·(smoothy·*·image_height). 
91 Here,·\'image_height\'·is·the·image·height·after·binning.·If·negative, 
92 the·default·values·are·used:·(100.0/2048)·for·blue·flat\-field·frames, 
93 (300.0/2048)·for·red·flat\-field·frames,·(200.0/2048)·for·blue·science 
94 frames·and·(500.0/2048)·for·red·science·frames.·(float;·default:·\-1.0).·The·full·name·of·this·option·for·the·EsoRex·configuration 
95 file·is·\fBuves_cal_tflat.backsub.smoothy\fR·[default·=·\fI\-1.0\fR]. 
96 .TP 
97 \fB\-\-reduce.slitlength\fR·\fI<float>\fR57 \fB\-\-reduce.slitlength\fR·\fI<float>\fR
98 Extraction·slit·length·(in·pixels).·If·negative,·the·value·inferred58 Extraction·slit·length·(in·pixels).·If·negative,·the·value·inferred
99 from·the·raw·frame·header·is·used·(float;·default:·\-1.0).·The·full·name·of·this·option·for·the·EsoRex·configuration59 from·the·raw·frame·header·is·used·(float;·default:·\-1.0).·The·full·name·of·this·option·for·the·EsoRex·configuration
100 file·is·\fBuves_cal_tflat.reduce.slitlength\fR·[default·=·\fI\-1.0\fR].60 file·is·\fBuves_cal_tflat.reduce.slitlength\fR·[default·=·\fI\-1.0\fR].
101 .TP61 .TP
102 \fB\-\-reduce.skysub\fR·\fI<bool>\fR62 \fB\-\-reduce.skysub\fR·\fI<bool>\fR
103 Do·sky\-subtraction·(only·applicable·to·linear·and·average63 Do·sky\-subtraction·(only·applicable·to·linear·and·average
Offset 159, 54 lines modifiedOffset 119, 14 lines modified
159 \fB\-\-reduce.merge_delt2\fR·\fI<float>\fR119 \fB\-\-reduce.merge_delt2\fR·\fI<float>\fR
160 Order·merging·right·hand·(long·wavelength)·cut.·To·reduce·the·amount120 Order·merging·right·hand·(long·wavelength)·cut.·To·reduce·the·amount
161 of·order·overlapping·regions·we·allow·to·cut·short·and·long·wavelength121 of·order·overlapping·regions·we·allow·to·cut·short·and·long·wavelength
162 ranges.·This·may·reduce·the·ripple·possibly·introduced·by·the·order122 ranges.·This·may·reduce·the·ripple·possibly·introduced·by·the·order
163 merging.·Suggested·values·is·4·(float;·default:·0.0).·The·full·name·of·this·option·for·the·EsoRex·configuration123 merging.·Suggested·values·is·4·(float;·default:·0.0).·The·full·name·of·this·option·for·the·EsoRex·configuration
164 file·is·\fBuves_cal_tflat.reduce.merge_delt2\fR·[default·=·\fI0.0\fR].124 file·is·\fBuves_cal_tflat.reduce.merge_delt2\fR·[default·=·\fI0.0\fR].
165 .TP125 .TP
166 \fB\-\-reduce.backsub.mmethod\fR·\fI<str>\fR 
167 Background·measuring·method.·If·equal·to·\'median\'·the·background·is 
168 sampled·using·the·median·of·a·subwindow.·If·\'minimum\',·the·subwindow 
169 minimum·value·is·used.·If·\'no\',·no·background·subtraction·is·done. 
170 (str;·default:·\'median\').·The·full·name·of·this·option·for·the·EsoRex·configuration 
171 file·is·\fBuves_cal_tflat.reduce.backsub.mmethod\fR·[default·=·\fImedian\fR]. 
172 .TP 
173 \fB\-\-reduce.backsub.npoints\fR·\fI<int>\fR 
174 This·is·the·number·of·columns·in·interorder·space·used·to·sample·the 
175 background.·(int;·default:·82).·The·full·name·of·this·option·for·the·EsoRex·configuration 
176 file·is·\fBuves_cal_tflat.reduce.backsub.npoints\fR·[default·=·\fI82\fR]. 
177 .TP 
178 \fB\-\-reduce.backsub.radiusy\fR·\fI<int>\fR 
179 The·height·(in·pixels)·of·the·background·sampling·window·is·(2*radiusy 
180 +·1).·This·parameter·is·not·corrected·for·binning.·(int;·default:·2).·The·full·name·of·this·option·for·the·EsoRex·configuration 
181 file·is·\fBuves_cal_tflat.reduce.backsub.radiusy\fR·[default·=·\fI2\fR]. 
182 .TP 
183 \fB\-\-reduce.backsub.sdegree\fR·\fI<int>\fR 
184 Degree·of·interpolating·splines.·Currently·only·degree·=·1·is 
185 supported·(int;·default:·1).·The·full·name·of·this·option·for·the·EsoRex·configuration 
186 file·is·\fBuves_cal_tflat.reduce.backsub.sdegree\fR·[default·=·\fI1\fR]. 
187 .TP 
188 \fB\-\-reduce.backsub.smoothx\fR·\fI<float>\fR 
189 If·spline·interpolation·is·used·to·measure·the·background,·the 
190 x\-radius·of·the·post\-smoothing·window·is·(smoothx·*·image_width). 
191 Here,·\'image_width\'·is·the·image·width·after·binning.·If·negative,·the 
192 default·values·are·used:·(25.0/4096)·for·blue·flat\-field·frames, 
193 (50.0/4096)·for·red·flat\-field·frames,·(300.0/4096)·for·blue·science 
194 frames·and·(300.0/4096)·for·red·science·frames.·(float;·default:·\-1.0).·The·full·name·of·this·option·for·the·EsoRex·configuration 
195 file·is·\fBuves_cal_tflat.reduce.backsub.smoothx\fR·[default·=·\fI\-1.0\fR]. 
196 .TP 
197 \fB\-\-reduce.backsub.smoothy\fR·\fI<float>\fR 
198 If·spline·interpolation·is·used·to·measure·the·background,·the 
199 y\-radius·of·the·post\-smoothing·window·is·(smoothy·*·image_height). 
200 Here,·\'image_height\'·is·the·image·height·after·binning.·If·negative, 
201 the·default·values·are·used:·(100.0/2048)·for·blue·flat\-field·frames, 
202 (300.0/2048)·for·red·flat\-field·frames,·(200.0/2048)·for·blue·science 
203 frames·and·(500.0/2048)·for·red·science·frames.·(float;·default:·\-1.0).·The·full·name·of·this·option·for·the·EsoRex·configuration 
204 file·is·\fBuves_cal_tflat.reduce.backsub.smoothy\fR·[default·=·\fI\-1.0\fR]. 
205 .TP 
206 \fB\-\-reduce.rebin.wavestep\fR·\fI<float>\fR126 \fB\-\-reduce.rebin.wavestep\fR·\fI<float>\fR
207 The·bin·size·(in·w.l.u.)·in·wavelength·space.·If·negative,·a·step·size127 The·bin·size·(in·w.l.u.)·in·wavelength·space.·If·negative,·a·step·size
208 of·2/3·*·(·average·pixel·size·)·is·used.·(float;·default:·\-1.0).·The·full·name·of·this·option·for·the·EsoRex·configuration128 of·2/3·*·(·average·pixel·size·)·is·used.·(float;·default:·\-1.0).·The·full·name·of·this·option·for·the·EsoRex·configuration
209 file·is·\fBuves_cal_tflat.reduce.rebin.wavestep\fR·[default·=·\fI\-1.0\fR].129 file·is·\fBuves_cal_tflat.reduce.rebin.wavestep\fR·[default·=·\fI\-1.0\fR].
210 .TP130 .TP
211 \fB\-\-reduce.rebin.scale\fR·\fI<bool>\fR131 \fB\-\-reduce.rebin.scale\fR·\fI<bool>\fR
212 Whether·or·not·to·multiply·by·the·factor·dx/dlambda·(pixels·per132 Whether·or·not·to·multiply·by·the·factor·dx/dlambda·(pixels·per
Offset 272, 14 lines modifiedOffset 192, 94 lines modified
272 (optimal·extraction·only)·If·false·(fastest),·the·spectrum·is192 (optimal·extraction·only)·If·false·(fastest),·the·spectrum·is
273 extracted·only·once.·If·true·(best),·the·spectrum·is·extracted·twice,193 extracted·only·once.·If·true·(best),·the·spectrum·is·extracted·twice,
274 the·second·time·using·improved·variance·estimates·based·on·the·first194 the·second·time·using·improved·variance·estimates·based·on·the·first
275 iteration.·Better·variance·estimates·slightly·improve·the·obtained195 iteration.·Better·variance·estimates·slightly·improve·the·obtained
276 signal·to·noise·but·at·the·cost·of·increased·execution·time·(bool;196 signal·to·noise·but·at·the·cost·of·increased·execution·time·(bool;
277 default:·True).·The·full·name·of·this·option·for·the·EsoRex·configuration197 default:·True).·The·full·name·of·this·option·for·the·EsoRex·configuration
278 file·is·\fBuves_cal_tflat.reduce.extract.best\fR·[default·=·\fITrue\fR].198 file·is·\fBuves_cal_tflat.reduce.extract.best\fR·[default·=·\fITrue\fR].
 199 .TP
 200 \fB\-\-reduce.backsub.mmethod\fR·\fI<str>\fR
 201 Background·measuring·method.·If·equal·to·\'median\'·the·background·is
 202 sampled·using·the·median·of·a·subwindow.·If·\'minimum\',·the·subwindow
 203 minimum·value·is·used.·If·\'no\',·no·background·subtraction·is·done.
 204 (str;·default:·\'median\').·The·full·name·of·this·option·for·the·EsoRex·configuration
 205 file·is·\fBuves_cal_tflat.reduce.backsub.mmethod\fR·[default·=·\fImedian\fR].
 206 .TP
 207 \fB\-\-reduce.backsub.npoints\fR·\fI<int>\fR
 208 This·is·the·number·of·columns·in·interorder·space·used·to·sample·the
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187 file·is·\fBuves_cal_wavecal.calibrate.tolerance\fR·[default·=·\fI0.6\fR].187 file·is·\fBuves_cal_wavecal.calibrate.tolerance\fR·[default·=·\fI0.6\fR].
188 .TP188 .TP
189 \fB\-\-kappa\fR·\fI<float>\fR189 \fB\-\-kappa\fR·\fI<float>\fR
190 Lines·with·residuals·more·then·kappa·stdev·are·rejected·from·the·final190 Lines·with·residuals·more·then·kappa·stdev·are·rejected·from·the·final
191 fit·(float;·default:·4.0).·The·full·name·of·this·option·for·the·EsoRex·configuration191 fit·(float;·default:·4.0).·The·full·name·of·this·option·for·the·EsoRex·configuration
192 file·is·\fBuves_cal_wavecal.calibrate.kappa\fR·[default·=·\fI4.0\fR].192 file·is·\fBuves_cal_wavecal.calibrate.kappa\fR·[default·=·\fI4.0\fR].
193 .TP193 .TP
 194 \fB\-\-rebin.wavestep\fR·\fI<float>\fR
 195 The·bin·size·(in·w.l.u.)·in·wavelength·space.·If·negative,·a·step·size
 196 of·2/3·*·(·average·pixel·size·)·is·used.·(float;·default:·\-1.0).·The·full·name·of·this·option·for·the·EsoRex·configuration
 197 file·is·\fBuves_cal_wavecal.rebin.wavestep\fR·[default·=·\fI\-1.0\fR].
 198 .TP
 199 \fB\-\-rebin.scale\fR·\fI<bool>\fR
 200 Whether·or·not·to·multiply·by·the·factor·dx/dlambda·(pixels·per
 201 wavelength)·during·the·rebinning.·This·option·is·disabled·as·default
 202 in·concordance·with·the·method·used·in·the·MIDAS·pipeline.·This·option
 203 should·be·set·to·true·to·convert·the·observed·flux·(in·pixel\-space)·to
 204 a·flux·per·wavelength·(in·wavelength\-space).·(bool;·default:·False).·The·full·name·of·this·option·for·the·EsoRex·configuration
 205 file·is·\fBuves_cal_wavecal.rebin.scale\fR·[default·=·\fIFalse\fR].
 206 .TP
194 \fB\-\-extract.method\fR·\fI<str>\fR207 \fB\-\-extract.method\fR·\fI<str>\fR
195 Extraction·method.·(2d/optimal·not·supported·by·uves_cal_wavecal,208 Extraction·method.·(2d/optimal·not·supported·by·uves_cal_wavecal,
196 weighted·supported·only·by·uves_cal_wavecal,·2d·not·supported·by209 weighted·supported·only·by·uves_cal_wavecal,·2d·not·supported·by
197 uves_cal_response)·(str;·default:·\'average\').·The·full·name·of·this·option·for·the·EsoRex·configuration210 uves_cal_response)·(str;·default:·\'average\').·The·full·name·of·this·option·for·the·EsoRex·configuration
198 file·is·\fBuves_cal_wavecal.extract.method\fR·[default·=·\fIaverage\fR].211 file·is·\fBuves_cal_wavecal.extract.method\fR·[default·=·\fIaverage\fR].
199 .TP212 .TP
200 \fB\-\-extract.kappa\fR·\fI<float>\fR213 \fB\-\-extract.kappa\fR·\fI<float>\fR
Offset 247, 27 lines modifiedOffset 260, 14 lines modified
247 (optimal·extraction·only)·If·false·(fastest),·the·spectrum·is260 (optimal·extraction·only)·If·false·(fastest),·the·spectrum·is
248 extracted·only·once.·If·true·(best),·the·spectrum·is·extracted·twice,261 extracted·only·once.·If·true·(best),·the·spectrum·is·extracted·twice,
249 the·second·time·using·improved·variance·estimates·based·on·the·first262 the·second·time·using·improved·variance·estimates·based·on·the·first
250 iteration.·Better·variance·estimates·slightly·improve·the·obtained263 iteration.·Better·variance·estimates·slightly·improve·the·obtained
251 signal·to·noise·but·at·the·cost·of·increased·execution·time·(bool;264 signal·to·noise·but·at·the·cost·of·increased·execution·time·(bool;
252 default:·True).·The·full·name·of·this·option·for·the·EsoRex·configuration265 default:·True).·The·full·name·of·this·option·for·the·EsoRex·configuration
253 file·is·\fBuves_cal_wavecal.extract.best\fR·[default·=·\fITrue\fR].266 file·is·\fBuves_cal_wavecal.extract.best\fR·[default·=·\fITrue\fR].
254 .TP 
255 \fB\-\-rebin.wavestep\fR·\fI<float>\fR 
256 The·bin·size·(in·w.l.u.)·in·wavelength·space.·If·negative,·a·step·size 
257 of·2/3·*·(·average·pixel·size·)·is·used.·(float;·default:·\-1.0).·The·full·name·of·this·option·for·the·EsoRex·configuration 
258 file·is·\fBuves_cal_wavecal.rebin.wavestep\fR·[default·=·\fI\-1.0\fR]. 
259 .TP 
260 \fB\-\-rebin.scale\fR·\fI<bool>\fR 
261 Whether·or·not·to·multiply·by·the·factor·dx/dlambda·(pixels·per 
262 wavelength)·during·the·rebinning.·This·option·is·disabled·as·default 
263 in·concordance·with·the·method·used·in·the·MIDAS·pipeline.·This·option 
264 should·be·set·to·true·to·convert·the·observed·flux·(in·pixel\-space)·to 
265 a·flux·per·wavelength·(in·wavelength\-space).·(bool;·default:·False).·The·full·name·of·this·option·for·the·EsoRex·configuration 
266 file·is·\fBuves_cal_wavecal.rebin.scale\fR·[default·=·\fIFalse\fR]. 
  
267 .PP267 .PP
268 Note·that·it·is·possible·to·create·a·configuration·file·containing·these268 Note·that·it·is·possible·to·create·a·configuration·file·containing·these
269 options,·along·with·suitable·default·values.·Please·refer·to·the·details269 options,·along·with·suitable·default·values.·Please·refer·to·the·details
270 provided·by·the·'esorex·\-\-help'·command.270 provided·by·the·'esorex·\-\-help'·command.
  
271 .SH·SEE·ALSO271 .SH·SEE·ALSO
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62 file·is·\fBuves.plotter\fR·[default·=·\fIno\fR].62 file·is·\fBuves.plotter\fR·[default·=·\fIno\fR].
63 .TP63 .TP
64 \fB\-\-process_chip\fR·\fI<str>\fR64 \fB\-\-process_chip\fR·\fI<str>\fR
65 For·RED·arm·data·process·the·redl,·redu,·or·both·chip(s)·(str;65 For·RED·arm·data·process·the·redl,·redu,·or·both·chip(s)·(str;
66 default:·\'both\').·The·full·name·of·this·option·for·the·EsoRex·configuration66 default:·\'both\').·The·full·name·of·this·option·for·the·EsoRex·configuration
67 file·is·\fBuves.process_chip\fR·[default·=·\fIboth\fR].67 file·is·\fBuves.process_chip\fR·[default·=·\fIboth\fR].
68 .TP68 .TP
69 \fB\-\-uves_cal_mflat.norm_method\fR·\fI<str>\fR 
70 Method·used·to·build·master·frame··(str;·default:·\'explevel\').·The·full·name·of·this·option·for·the·EsoRex·configuration 
71 file·is·\fBuves_obs_redchain.uves_cal_mflat.norm_method\fR·[default·=·\fIexplevel\fR]. 
72 .TP 
73 \fB\-\-uves_cal_mflat.backsub.mmethod\fR·\fI<str>\fR 
74 Background·measuring·method.·If·equal·to·\'median\'·the·background·is 
75 sampled·using·the·median·of·a·subwindow.·If·\'minimum\',·the·subwindow 
76 minimum·value·is·used.·If·\'no\',·no·background·subtraction·is·done. 
77 (str;·default:·\'median\').·The·full·name·of·this·option·for·the·EsoRex·configuration 
78 file·is·\fBuves_obs_redchain.uves_cal_mflat.backsub.mmethod\fR·[default·=·\fImedian\fR]. 
79 .TP 
80 \fB\-\-uves_cal_mflat.backsub.npoints\fR·\fI<int>\fR 
81 This·is·the·number·of·columns·in·interorder·space·used·to·sample·the 
82 background.·(int;·default:·82).·The·full·name·of·this·option·for·the·EsoRex·configuration 
83 file·is·\fBuves_obs_redchain.uves_cal_mflat.backsub.npoints\fR·[default·=·\fI82\fR]. 
84 .TP 
85 \fB\-\-uves_cal_mflat.backsub.radiusy\fR·\fI<int>\fR 
86 The·height·(in·pixels)·of·the·background·sampling·window·is·(2*radiusy 
87 +·1).·This·parameter·is·not·corrected·for·binning.·(int;·default:·2).·The·full·name·of·this·option·for·the·EsoRex·configuration 
88 file·is·\fBuves_obs_redchain.uves_cal_mflat.backsub.radiusy\fR·[default·=·\fI2\fR]. 
89 .TP 
90 \fB\-\-uves_cal_mflat.backsub.sdegree\fR·\fI<int>\fR 
91 Degree·of·interpolating·splines.·Currently·only·degree·=·1·is 
92 supported·(int;·default:·1).·The·full·name·of·this·option·for·the·EsoRex·configuration 
93 file·is·\fBuves_obs_redchain.uves_cal_mflat.backsub.sdegree\fR·[default·=·\fI1\fR]. 
94 .TP 
95 \fB\-\-uves_cal_mflat.backsub.smoothx\fR·\fI<float>\fR 
96 If·spline·interpolation·is·used·to·measure·the·background,·the 
97 x\-radius·of·the·post\-smoothing·window·is·(smoothx·*·image_width). 
98 Here,·\'image_width\'·is·the·image·width·after·binning.·If·negative,·the 
99 default·values·are·used:·(25.0/4096)·for·blue·flat\-field·frames, 
100 (50.0/4096)·for·red·flat\-field·frames,·(300.0/4096)·for·blue·science 
101 frames·and·(300.0/4096)·for·red·science·frames.·(float;·default:·\-1.0).·The·full·name·of·this·option·for·the·EsoRex·configuration 
102 file·is·\fBuves_obs_redchain.uves_cal_mflat.backsub.smoothx\fR·[default·=·\fI\-1.0\fR]. 
103 .TP 
104 \fB\-\-uves_cal_mflat.backsub.smoothy\fR·\fI<float>\fR 
105 If·spline·interpolation·is·used·to·measure·the·background,·the 
106 y\-radius·of·the·post\-smoothing·window·is·(smoothy·*·image_height). 
107 Here,·\'image_height\'·is·the·image·height·after·binning.·If·negative, 
108 the·default·values·are·used:·(100.0/2048)·for·blue·flat\-field·frames, 
109 (300.0/2048)·for·red·flat\-field·frames,·(200.0/2048)·for·blue·science 
110 frames·and·(500.0/2048)·for·red·science·frames.·(float;·default:·\-1.0).·The·full·name·of·this·option·for·the·EsoRex·configuration 
111 file·is·\fBuves_obs_redchain.uves_cal_mflat.backsub.smoothy\fR·[default·=·\fI\-1.0\fR]. 
112 .TP 
113 \fB\-\-uves_obs_scired.clean_traps\fR·\fI<bool>\fR 
114 Clean·detector·traps.·If·TRUE·detector·traps·are·interpolated.The·bad 
115 pixels·are·replaced·by·the·average·of·thenearest·good·pixels·in·the 
116 same·column,·or·simply·marked·as·bad.·The·positions·of·bad·pixels·are 
117 hard\-coded·(as·function·of·UVES·chip).·(bool;·default:·False).·The·full·name·of·this·option·for·the·EsoRex·configuration 
118 file·is·\fBuves_obs_redchain.uves_obs_scired.clean_traps\fR·[default·=·\fIFalse\fR]. 
119 .TP 
120 \fB\-\-uves_obs_scired.reduce.slitlength\fR·\fI<float>\fR 
121 Extraction·slit·length·(in·pixels).·If·negative,·the·value·inferred 
122 from·the·raw·frame·header·is·used·(float;·default:·\-1.0).·The·full·name·of·this·option·for·the·EsoRex·configuration 
123 file·is·\fBuves_obs_redchain.uves_obs_scired.reduce.slitlength\fR·[default·=·\fI\-1.0\fR]. 
124 .TP 
125 \fB\-\-uves_obs_scired.reduce.skysub\fR·\fI<bool>\fR 
126 Do·sky\-subtraction·(only·applicable·to·linear·and·average 
127 extractions)?·(bool;·default:·True).·The·full·name·of·this·option·for·the·EsoRex·configuration 
128 file·is·\fBuves_obs_redchain.uves_obs_scired.reduce.skysub\fR·[default·=·\fITrue\fR]. 
129 .TP 
130 \fB\-\-uves_obs_scired.reduce.objoffset\fR·\fI<float>\fR 
131 Offset·(in·pixels)·of·extraction·slit·with·respect·to·center·of·order. 
132 This·parameter·applies·to·linear/average/optimal·extraction.·For 
133 linear/average·extraction,·if·the·related·parameter·objslit·is 
134 negative,·the·offset·is·automatically·determined·by·measuring·the 
135 actual·object·position.··(float;·default:·0.0).·The·full·name·of·this·option·for·the·EsoRex·configuration 
136 file·is·\fBuves_obs_redchain.uves_obs_scired.reduce.objoffset\fR·[default·=·\fI0.0\fR]. 
137 .TP 
138 \fB\-\-uves_obs_scired.reduce.objslit\fR·\fI<float>\fR 
139 Object·window·size·(in·pixels).·This·must·be·less·than·the·total·slit 
140 length.·If·negative,·the·default·value·(half·of·full·slit·length)·is 
141 used.·The·upper·and·lower·sky·windows·are·defined·as·the·part·of·the 
142 full·slit·(if·any)·outside·the·object·window.·The·center·of·the·object 
143 window·is·determined·by·the·offset·parameter.·This·parameter·does·not 
144 apply·to·optimal·extraction.·(float;·default:·\-1.0).·The·full·name·of·this·option·for·the·EsoRex·configuration 
145 file·is·\fBuves_obs_redchain.uves_obs_scired.reduce.objslit\fR·[default·=·\fI\-1.0\fR]. 
146 .TP 
147 \fB\-\-uves_obs_scired.reduce.tiltcorr\fR·\fI<bool>\fR 
148 If·enabled·(recommended),·the·provided·dispersion·solutions·obtained 
149 at·different·slit·positions·are·interpolated·linearly·at·the·actually 
150 measured·position·of·the·object/sky.·Line·tilt·correction·is·currently 
151 not·supported·for·2d·extraction,·in·which·case·the·dispersion·solution 
152 obtained·at·the·middle·of·the·slit·is·always·used.·(bool;·default: 
153 True).·The·full·name·of·this·option·for·the·EsoRex·configuration 
154 file·is·\fBuves_obs_redchain.uves_obs_scired.reduce.tiltcorr\fR·[default·=·\fITrue\fR]. 
155 .TP 
156 \fB\-\-uves_obs_scired.reduce.ffmethod\fR·\fI<str>\fR 
157 Flat\-fielding·method.·If·set·to·\'pixel\',·flat\-fielding·is·done·in 
158 pixel\-pixel·space·(before·extraction);·if·set·to·\'extract\',·flat\- 
159 fielding·is·performed·in·pixel\-order·space·(i.e.·after·extraction).·If 
160 set·to·\'no\',·no·flat\-field·correction·is·done·(str;·default: 
161 \'extract\').·The·full·name·of·this·option·for·the·EsoRex·configuration 
162 file·is·\fBuves_obs_redchain.uves_obs_scired.reduce.ffmethod\fR·[default·=·\fIextract\fR]. 
163 .TP 
164 \fB\-\-uves_obs_scired.reduce.merge\fR·\fI<str>\fR 
165 Order·merging·method.·If·\'optimal\',·the·flux·in·the·overlapping·region 
166 is·set·to·the·(optimally·computed,·using·the·uncertainties)·average·of 
167 single·order·spectra.·If·\'sum\',·the·flux·in·the·overlapping·region·is 
168 computed·as·the·sum·of·the·single·order·spectra.·If·\'noappend\'·the 
169 spectrum·is·simply·rebinned·but·not·merged.If·flat\-fielding·is·done, 
170 method·\'optimal\'·is·recommended,·otherwise·\'sum\'.·(str;·default: 
171 \'optimal\').·The·full·name·of·this·option·for·the·EsoRex·configuration 
172 file·is·\fBuves_obs_redchain.uves_obs_scired.reduce.merge\fR·[default·=·\fIoptimal\fR]. 
173 .TP 
174 \fB\-\-uves_obs_scired.reduce.merge_delt1\fR·\fI<float>\fR 
175 Order·merging·left·hand·(short·wavelength)·cut.·To·reduce·the·amount 
176 of·order·overlapping·regions·we·allow·to·cut·short·and·long·wavelength 
177 ranges.·This·may·reduce·the·ripple·possibly·introduced·by·the·order 
178 merging.·Suggested·values·are:·10·(W<=390),·12·(390<W<=437, 
179 520<W<=564),·14·(437<W<=520,·564<W)··(float;·default:·0.0).·The·full·name·of·this·option·for·the·EsoRex·configuration 
180 file·is·\fBuves_obs_redchain.uves_obs_scired.reduce.merge_delt1\fR·[default·=·\fI0.0\fR]. 
181 .TP 
182 \fB\-\-uves_obs_scired.reduce.merge_delt2\fR·\fI<float>\fR 
183 Order·merging·right·hand·(long·wavelength)·cut.·To·reduce·the·amount 
184 of·order·overlapping·regions·we·allow·to·cut·short·and·long·wavelength 
185 ranges.·This·may·reduce·the·ripple·possibly·introduced·by·the·order 
186 merging.·Suggested·values·is·4·(float;·default:·0.0).·The·full·name·of·this·option·for·the·EsoRex·configuration 
187 file·is·\fBuves_obs_redchain.uves_obs_scired.reduce.merge_delt2\fR·[default·=·\fI0.0\fR]. 
188 .TP 
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154 \fB\-\-reduce.merge_delt2\fR·\fI<float>\fR154 \fB\-\-reduce.merge_delt2\fR·\fI<float>\fR
155 Order·merging·right·hand·(long·wavelength)·cut.·To·reduce·the·amount155 Order·merging·right·hand·(long·wavelength)·cut.·To·reduce·the·amount
156 of·order·overlapping·regions·we·allow·to·cut·short·and·long·wavelength156 of·order·overlapping·regions·we·allow·to·cut·short·and·long·wavelength
157 ranges.·This·may·reduce·the·ripple·possibly·introduced·by·the·order157 ranges.·This·may·reduce·the·ripple·possibly·introduced·by·the·order
158 merging.·Suggested·values·is·4·(float;·default:·0.0).·The·full·name·of·this·option·for·the·EsoRex·configuration158 merging.·Suggested·values·is·4·(float;·default:·0.0).·The·full·name·of·this·option·for·the·EsoRex·configuration
159 file·is·\fBuves_obs_scired.reduce.merge_delt2\fR·[default·=·\fI0.0\fR].159 file·is·\fBuves_obs_scired.reduce.merge_delt2\fR·[default·=·\fI0.0\fR].
160 .TP160 .TP
161 \fB\-\-reduce.backsub.mmethod\fR·\fI<str>\fR 
162 Background·measuring·method.·If·equal·to·\'median\'·the·background·is 
163 sampled·using·the·median·of·a·subwindow.·If·\'minimum\',·the·subwindow 
164 minimum·value·is·used.·If·\'no\',·no·background·subtraction·is·done. 
165 (str;·default:·\'median\').·The·full·name·of·this·option·for·the·EsoRex·configuration 
166 file·is·\fBuves_obs_scired.reduce.backsub.mmethod\fR·[default·=·\fImedian\fR]. 
167 .TP 
168 \fB\-\-reduce.backsub.npoints\fR·\fI<int>\fR 
169 This·is·the·number·of·columns·in·interorder·space·used·to·sample·the 
170 background.·(int;·default:·82).·The·full·name·of·this·option·for·the·EsoRex·configuration 
171 file·is·\fBuves_obs_scired.reduce.backsub.npoints\fR·[default·=·\fI82\fR]. 
172 .TP 
173 \fB\-\-reduce.backsub.radiusy\fR·\fI<int>\fR 
174 The·height·(in·pixels)·of·the·background·sampling·window·is·(2*radiusy 
175 +·1).·This·parameter·is·not·corrected·for·binning.·(int;·default:·2).·The·full·name·of·this·option·for·the·EsoRex·configuration 
176 file·is·\fBuves_obs_scired.reduce.backsub.radiusy\fR·[default·=·\fI2\fR]. 
177 .TP 
178 \fB\-\-reduce.backsub.sdegree\fR·\fI<int>\fR 
179 Degree·of·interpolating·splines.·Currently·only·degree·=·1·is 
180 supported·(int;·default:·1).·The·full·name·of·this·option·for·the·EsoRex·configuration 
181 file·is·\fBuves_obs_scired.reduce.backsub.sdegree\fR·[default·=·\fI1\fR]. 
182 .TP 
183 \fB\-\-reduce.backsub.smoothx\fR·\fI<float>\fR 
184 If·spline·interpolation·is·used·to·measure·the·background,·the 
185 x\-radius·of·the·post\-smoothing·window·is·(smoothx·*·image_width). 
186 Here,·\'image_width\'·is·the·image·width·after·binning.·If·negative,·the 
187 default·values·are·used:·(25.0/4096)·for·blue·flat\-field·frames, 
188 (50.0/4096)·for·red·flat\-field·frames,·(300.0/4096)·for·blue·science 
189 frames·and·(300.0/4096)·for·red·science·frames.·(float;·default:·\-1.0).·The·full·name·of·this·option·for·the·EsoRex·configuration 
190 file·is·\fBuves_obs_scired.reduce.backsub.smoothx\fR·[default·=·\fI\-1.0\fR]. 
191 .TP 
192 \fB\-\-reduce.backsub.smoothy\fR·\fI<float>\fR 
193 If·spline·interpolation·is·used·to·measure·the·background,·the 
194 y\-radius·of·the·post\-smoothing·window·is·(smoothy·*·image_height). 
195 Here,·\'image_height\'·is·the·image·height·after·binning.·If·negative, 
196 the·default·values·are·used:·(100.0/2048)·for·blue·flat\-field·frames, 
197 (300.0/2048)·for·red·flat\-field·frames,·(200.0/2048)·for·blue·science 
198 frames·and·(500.0/2048)·for·red·science·frames.·(float;·default:·\-1.0).·The·full·name·of·this·option·for·the·EsoRex·configuration 
199 file·is·\fBuves_obs_scired.reduce.backsub.smoothy\fR·[default·=·\fI\-1.0\fR]. 
200 .TP 
201 \fB\-\-reduce.rebin.wavestep\fR·\fI<float>\fR161 \fB\-\-reduce.rebin.wavestep\fR·\fI<float>\fR
202 The·bin·size·(in·w.l.u.)·in·wavelength·space.·If·negative,·a·step·size162 The·bin·size·(in·w.l.u.)·in·wavelength·space.·If·negative,·a·step·size
203 of·2/3·*·(·average·pixel·size·)·is·used.·(float;·default:·\-1.0).·The·full·name·of·this·option·for·the·EsoRex·configuration163 of·2/3·*·(·average·pixel·size·)·is·used.·(float;·default:·\-1.0).·The·full·name·of·this·option·for·the·EsoRex·configuration
204 file·is·\fBuves_obs_scired.reduce.rebin.wavestep\fR·[default·=·\fI\-1.0\fR].164 file·is·\fBuves_obs_scired.reduce.rebin.wavestep\fR·[default·=·\fI\-1.0\fR].
205 .TP165 .TP
206 \fB\-\-reduce.rebin.scale\fR·\fI<bool>\fR166 \fB\-\-reduce.rebin.scale\fR·\fI<bool>\fR
207 Whether·or·not·to·multiply·by·the·factor·dx/dlambda·(pixels·per167 Whether·or·not·to·multiply·by·the·factor·dx/dlambda·(pixels·per
Offset 267, 14 lines modifiedOffset 227, 54 lines modified
267 (optimal·extraction·only)·If·false·(fastest),·the·spectrum·is227 (optimal·extraction·only)·If·false·(fastest),·the·spectrum·is
268 extracted·only·once.·If·true·(best),·the·spectrum·is·extracted·twice,228 extracted·only·once.·If·true·(best),·the·spectrum·is·extracted·twice,
269 the·second·time·using·improved·variance·estimates·based·on·the·first229 the·second·time·using·improved·variance·estimates·based·on·the·first
270 iteration.·Better·variance·estimates·slightly·improve·the·obtained230 iteration.·Better·variance·estimates·slightly·improve·the·obtained
271 signal·to·noise·but·at·the·cost·of·increased·execution·time·(bool;231 signal·to·noise·but·at·the·cost·of·increased·execution·time·(bool;
272 default:·True).·The·full·name·of·this·option·for·the·EsoRex·configuration232 default:·True).·The·full·name·of·this·option·for·the·EsoRex·configuration
273 file·is·\fBuves_obs_scired.reduce.extract.best\fR·[default·=·\fITrue\fR].233 file·is·\fBuves_obs_scired.reduce.extract.best\fR·[default·=·\fITrue\fR].
 234 .TP
 235 \fB\-\-reduce.backsub.mmethod\fR·\fI<str>\fR
 236 Background·measuring·method.·If·equal·to·\'median\'·the·background·is
 237 sampled·using·the·median·of·a·subwindow.·If·\'minimum\',·the·subwindow
 238 minimum·value·is·used.·If·\'no\',·no·background·subtraction·is·done.
 239 (str;·default:·\'median\').·The·full·name·of·this·option·for·the·EsoRex·configuration
 240 file·is·\fBuves_obs_scired.reduce.backsub.mmethod\fR·[default·=·\fImedian\fR].
 241 .TP
 242 \fB\-\-reduce.backsub.npoints\fR·\fI<int>\fR
 243 This·is·the·number·of·columns·in·interorder·space·used·to·sample·the
 244 background.·(int;·default:·82).·The·full·name·of·this·option·for·the·EsoRex·configuration
 245 file·is·\fBuves_obs_scired.reduce.backsub.npoints\fR·[default·=·\fI82\fR].
 246 .TP
 247 \fB\-\-reduce.backsub.radiusy\fR·\fI<int>\fR
 248 The·height·(in·pixels)·of·the·background·sampling·window·is·(2*radiusy
 249 +·1).·This·parameter·is·not·corrected·for·binning.·(int;·default:·2).·The·full·name·of·this·option·for·the·EsoRex·configuration
 250 file·is·\fBuves_obs_scired.reduce.backsub.radiusy\fR·[default·=·\fI2\fR].
 251 .TP
 252 \fB\-\-reduce.backsub.sdegree\fR·\fI<int>\fR
 253 Degree·of·interpolating·splines.·Currently·only·degree·=·1·is
 254 supported·(int;·default:·1).·The·full·name·of·this·option·for·the·EsoRex·configuration
 255 file·is·\fBuves_obs_scired.reduce.backsub.sdegree\fR·[default·=·\fI1\fR].
 256 .TP
 257 \fB\-\-reduce.backsub.smoothx\fR·\fI<float>\fR
 258 If·spline·interpolation·is·used·to·measure·the·background,·the
 259 x\-radius·of·the·post\-smoothing·window·is·(smoothx·*·image_width).
 260 Here,·\'image_width\'·is·the·image·width·after·binning.·If·negative,·the
 261 default·values·are·used:·(25.0/4096)·for·blue·flat\-field·frames,
 262 (50.0/4096)·for·red·flat\-field·frames,·(300.0/4096)·for·blue·science
 263 frames·and·(300.0/4096)·for·red·science·frames.·(float;·default:·\-1.0).·The·full·name·of·this·option·for·the·EsoRex·configuration
 264 file·is·\fBuves_obs_scired.reduce.backsub.smoothx\fR·[default·=·\fI\-1.0\fR].
 265 .TP
 266 \fB\-\-reduce.backsub.smoothy\fR·\fI<float>\fR
 267 If·spline·interpolation·is·used·to·measure·the·background,·the
 268 y\-radius·of·the·post\-smoothing·window·is·(smoothy·*·image_height).
 269 Here,·\'image_height\'·is·the·image·height·after·binning.·If·negative,
 270 the·default·values·are·used:·(100.0/2048)·for·blue·flat\-field·frames,
 271 (300.0/2048)·for·red·flat\-field·frames,·(200.0/2048)·for·blue·science
 272 frames·and·(500.0/2048)·for·red·science·frames.·(float;·default:·\-1.0).·The·full·name·of·this·option·for·the·EsoRex·configuration
 273 file·is·\fBuves_obs_scired.reduce.backsub.smoothy\fR·[default·=·\fI\-1.0\fR].
  
274 .PP274 .PP
275 Note·that·it·is·possible·to·create·a·configuration·file·containing·these275 Note·that·it·is·possible·to·create·a·configuration·file·containing·these
276 options,·along·with·suitable·default·values.·Please·refer·to·the·details276 options,·along·with·suitable·default·values.·Please·refer·to·the·details
277 provided·by·the·'esorex·\-\-help'·command.277 provided·by·the·'esorex·\-\-help'·command.
  
278 .SH·SEE·ALSO278 .SH·SEE·ALSO