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| 2 | ·0e6ac063f338965920fb3ed6d3e2357c·2547544·debug·optional·cpl-plugin-uves-dbgsym_5.9.1+dfsg-1_arm64.deb | 2 | ·0e6ac063f338965920fb3ed6d3e2357c·2547544·debug·optional·cpl-plugin-uves-dbgsym_5.9.1+dfsg-1_arm64.deb |
| 3 | · | 3 | ·f4d814f208dd44a16242d9255528ae55·182344·doc·optional·cpl-plugin-uves-doc_5.9.1+dfsg-1_all.deb |
| 4 | ·4a88e7f73b5501552ab633a8a64492b2·820780·science·optional·cpl-plugin-uves_5.9.1+dfsg-1_arm64.deb | 4 | ·4a88e7f73b5501552ab633a8a64492b2·820780·science·optional·cpl-plugin-uves_5.9.1+dfsg-1_arm64.deb |
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| 1 | Package:·cpl-plugin-uves-doc | 1 | Package:·cpl-plugin-uves-doc |
| 2 | Source:·cpl-plugin-uves | 2 | Source:·cpl-plugin-uves |
| 3 | Version:·5.9.1+dfsg-1 | 3 | Version:·5.9.1+dfsg-1 |
| 4 | Architecture:·all | 4 | Architecture:·all |
| 5 | Maintainer:·Debian·Astronomy·Maintainers·<debian-astro-maintainers@lists.alioth.debian.org> | 5 | Maintainer:·Debian·Astronomy·Maintainers·<debian-astro-maintainers@lists.alioth.debian.org> |
| 6 | Installed-Size:·139 | 6 | Installed-Size:·1393 |
| 7 | Section:·doc | 7 | Section:·doc |
| 8 | Priority:·optional | 8 | Priority:·optional |
| 9 | Multi-Arch:·foreign | 9 | Multi-Arch:·foreign |
| 10 | Homepage:·https://www.eso.org/sci/software/pipelines/uves | 10 | Homepage:·https://www.eso.org/sci/software/pipelines/uves |
| 11 | Description:·ESO·data·reduction·pipeline·documentation·for·UVES | 11 | Description:·ESO·data·reduction·pipeline·documentation·for·UVES |
| 12 | ·This·package·contains·the·HTML·documentation·and·manpages·for·the·data | 12 | ·This·package·contains·the·HTML·documentation·and·manpages·for·the·data |
| 13 | ·reduction·pipeline·for·the·UVES·instrument·of·the·Very·Large·Telescope | 13 | ·reduction·pipeline·for·the·UVES·instrument·of·the·Very·Large·Telescope |
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| 87 | -rw-r--r--···0·root·········(0)·root·········(0)·····2906·2018-04-27·13:52:31.000000·./usr/share/man/man7/flames_cal_mkmaster.7.gz | 87 | -rw-r--r--···0·root·········(0)·root·········(0)·····2906·2018-04-27·13:52:31.000000·./usr/share/man/man7/flames_cal_mkmaster.7.gz |
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| 94 | -rw-r--r--···0·root·········(0)·root·········(0)·····1350·2018-04-27·13:52:31.000000·./usr/share/man/man7/flames_utl_unpack.7.gz | 94 | -rw-r--r--···0·root·········(0)·root·········(0)·····1350·2018-04-27·13:52:31.000000·./usr/share/man/man7/flames_utl_unpack.7.gz |
| 95 | -rw-r--r--···0·root·········(0)·root·········(0)·····2297·2018-04-27·13:52:31.000000·./usr/share/man/man7/uves_cal_cd_align.7.gz | 95 | -rw-r--r--···0·root·········(0)·root·········(0)·····2297·2018-04-27·13:52:31.000000·./usr/share/man/man7/uves_cal_cd_align.7.gz |
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| 101 | -rw-r--r--···0·root·········(0)·root·········(0)·····3760·2018-04-27·13:52:31.000000·./usr/share/man/man7/uves_cal_orderpos.7.gz | 101 | -rw-r--r--···0·root·········(0)·root·········(0)·····3760·2018-04-27·13:52:31.000000·./usr/share/man/man7/uves_cal_orderpos.7.gz |
| 102 | -rw-r--r--···0·root·········(0)·root·········(0)·····2509·2018-04-27·13:52:31.000000·./usr/share/man/man7/uves_cal_predict.7.gz | 102 | -rw-r--r--···0·root·········(0)·root·········(0)·····2509·2018-04-27·13:52:31.000000·./usr/share/man/man7/uves_cal_predict.7.gz |
| 103 | -rw-r--r--···0·root·········(0)·root·········(0)·····547 | 103 | -rw-r--r--···0·root·········(0)·root·········(0)·····5479·2018-04-27·13:52:31.000000·./usr/share/man/man7/uves_cal_response.7.gz |
| 104 | -rw-r--r--···0·root·········(0)·root·········(0)·····510 | 104 | -rw-r--r--···0·root·········(0)·root·········(0)·····5105·2018-04-27·13:52:31.000000·./usr/share/man/man7/uves_cal_tflat.7.gz |
| 105 | -rw-r--r--···0·root·········(0)·root·········(0)·····543 | 105 | -rw-r--r--···0·root·········(0)·root·········(0)·····5436·2018-04-27·13:52:31.000000·./usr/share/man/man7/uves_cal_wavecal.7.gz |
| 106 | -rw-r--r--···0·root·········(0)·root·········(0)·····9 | 106 | -rw-r--r--···0·root·········(0)·root·········(0)·····9112·2018-04-27·13:52:31.000000·./usr/share/man/man7/uves_obs_redchain.7.gz |
| 107 | -rw-r--r--···0·root·········(0)·root·········(0)·····552 | 107 | -rw-r--r--···0·root·········(0)·root·········(0)·····5529·2018-04-27·13:52:31.000000·./usr/share/man/man7/uves_obs_scired.7.gz |
| 108 | -rw-r--r--···0·root·········(0)·root·········(0)·····1595·2018-04-27·13:52:31.000000·./usr/share/man/man7/uves_utl_ima_arith.7.gz | 108 | -rw-r--r--···0·root·········(0)·root·········(0)·····1595·2018-04-27·13:52:31.000000·./usr/share/man/man7/uves_utl_ima_arith.7.gz |
| 109 | -rw-r--r--···0·root·········(0)·root·········(0)·····1681·2018-04-27·13:52:31.000000·./usr/share/man/man7/uves_utl_remove_crh_single.7.gz | 109 | -rw-r--r--···0·root·········(0)·root·········(0)·····1681·2018-04-27·13:52:31.000000·./usr/share/man/man7/uves_utl_remove_crh_single.7.gz |
| 110 | lrwxrwxrwx···0·root·········(0)·root·········(0)········0·2018-04-27·13:52:31.000000·./usr/share/doc/cpl-plugin-uves/html/_static/doctools.js·->·../../../../javascript/sphinxdoc/1.0/doctools.js | 110 | lrwxrwxrwx···0·root·········(0)·root·········(0)········0·2018-04-27·13:52:31.000000·./usr/share/doc/cpl-plugin-uves/html/_static/doctools.js·->·../../../../javascript/sphinxdoc/1.0/doctools.js |
| 111 | lrwxrwxrwx···0·root·········(0)·root·········(0)········0·2018-04-27·13:52:31.000000·./usr/share/doc/cpl-plugin-uves/html/_static/jquery.js·->·../../../../javascript/sphinxdoc/1.0/jquery.js | 111 | lrwxrwxrwx···0·root·········(0)·root·········(0)········0·2018-04-27·13:52:31.000000·./usr/share/doc/cpl-plugin-uves/html/_static/jquery.js·->·../../../../javascript/sphinxdoc/1.0/jquery.js |
| 112 | lrwxrwxrwx···0·root·········(0)·root·········(0)········0·2018-04-27·13:52:31.000000·./usr/share/doc/cpl-plugin-uves/html/_static/searchtools.js·->·../../../../javascript/sphinxdoc/1.0/searchtools.js | 112 | lrwxrwxrwx···0·root·········(0)·root·········(0)········0·2018-04-27·13:52:31.000000·./usr/share/doc/cpl-plugin-uves/html/_static/searchtools.js·->·../../../../javascript/sphinxdoc/1.0/searchtools.js |
| 113 | lrwxrwxrwx···0·root·········(0)·root·········(0)········0·2018-04-27·13:52:31.000000·./usr/share/doc/cpl-plugin-uves/html/_static/underscore.js·->·../../../../javascript/sphinxdoc/1.0/underscore.js | 113 | lrwxrwxrwx···0·root·········(0)·root·········(0)········0·2018-04-27·13:52:31.000000·./usr/share/doc/cpl-plugin-uves/html/_static/underscore.js·->·../../../../javascript/sphinxdoc/1.0/underscore.js |
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| 142 | ····Degrees·of·the·global·2d·dispersion·polynomial.·If·a·negative·number··is·specified,·the·polynomial·degrees·are·automatically·selected·by··starting·from·(1,·1)·and·inreasing·the·degrees·as·long·as·the·RMS··residual·decreases·significantly·(int;·default:·4)·[default=4]. | 142 | ····Degrees·of·the·global·2d·dispersion·polynomial.·If·a·negative·number··is·specified,·the·polynomial·degrees·are·automatically·selected·by··starting·from·(1,·1)·and·inreasing·the·degrees·as·long·as·the·RMS··residual·decreases·significantly·(int;·default:·4)·[default=4]. |
| 143 | ..·py:attribute::·flames_cal_wavecal.param.tolerance | 143 | ..·py:attribute::·flames_cal_wavecal.param.tolerance |
| 144 | ····Tolerance·of·fit.·If·positive,·the·tolerance·is·in·pixel·units.·If··negative,·abs(tolerance)·is·in·wavelength·units.·Lines·with·residuals··worse·than·the·tolerance·are·excluded·from·the·final·fit.·Unlike·in··previous·versions,·this·parameter·is·not·corrected·for·CCD·binning.··This·rejection·based·on·the·absolute·residual·in·pixel·can·be··effectively·disabled·by·setting·the·tolerance·to·a·very·large·number··(e.g.·9999).·In·that·case·outliers·will·be·rejected·using·only·kappa··sigma·clipping.·(float;·default:·0.6)·[default=0.6]. | 144 | ····Tolerance·of·fit.·If·positive,·the·tolerance·is·in·pixel·units.·If··negative,·abs(tolerance)·is·in·wavelength·units.·Lines·with·residuals··worse·than·the·tolerance·are·excluded·from·the·final·fit.·Unlike·in··previous·versions,·this·parameter·is·not·corrected·for·CCD·binning.··This·rejection·based·on·the·absolute·residual·in·pixel·can·be··effectively·disabled·by·setting·the·tolerance·to·a·very·large·number··(e.g.·9999).·In·that·case·outliers·will·be·rejected·using·only·kappa··sigma·clipping.·(float;·default:·0.6)·[default=0.6]. |
| 145 | ..·py:attribute::·flames_cal_wavecal.param.kappa | 145 | ..·py:attribute::·flames_cal_wavecal.param.kappa |
| 146 | ····Lines·with·residuals·more·then·kappa·stdev·are·rejected·from·the·final··fit·(float;·default:·4.0)·[default=4.0]. | 146 | ····Lines·with·residuals·more·then·kappa·stdev·are·rejected·from·the·final··fit·(float;·default:·4.0)·[default=4.0]. |
| 147 | ..·py:attribute::·flames_cal_wavecal.param.rebin.wavestep | ||
| 148 | ····The·bin·size·(in·w.l.u.)·in·wavelength·space.·If·negative,·a·step·size··of·2/3·*·(·average·pixel·size·)·is·used.·(float;·default:·-1.0)·[default=-1.0]. | ||
| 149 | ..·py:attribute::·flames_cal_wavecal.param.rebin.scale | ||
| 150 | ····Whether·or·not·to·multiply·by·the·factor·dx/dlambda·(pixels·per··wavelength)·during·the·rebinning.·This·option·is·disabled·as·default··in·concordance·with·the·method·used·in·the·MIDAS·pipeline.·This·option··should·be·set·to·true·to·convert·the·observed·flux·(in·pixel-space)·to··a·flux·per·wavelength·(in·wavelength-space).·(bool;·default:·False)·[default=False]. | ||
| 151 | ..·py:attribute::·flames_cal_wavecal.param.extract.method | 147 | ..·py:attribute::·flames_cal_wavecal.param.extract.method |
| 152 | ····Extraction·method.·(2d/optimal·not·supported·by·uves_cal_wavecal,··weighted·supported·only·by·uves_cal_wavecal,·2d·not·supported·by··uves_cal_response)·(str;·default:·'average')·[default="average"]. | 148 | ····Extraction·method.·(2d/optimal·not·supported·by·uves_cal_wavecal,··weighted·supported·only·by·uves_cal_wavecal,·2d·not·supported·by··uves_cal_response)·(str;·default:·'average')·[default="average"]. |
| 153 | ..·py:attribute::·flames_cal_wavecal.param.extract.kappa | 149 | ..·py:attribute::·flames_cal_wavecal.param.extract.kappa |
| 154 | ····In·optimal·extraction·mode,·this·is·the·threshold·for·bad·(i.e.··hot/cold)·pixel·rejection.·If·a·pixel·deviates·more·than·kappa*sigma··(where·sigma·is·the·uncertainty·of·the·pixel·flux)·from·the·inferred··spatial·profile,·its·weight·is·set·to·zero.·Range:·[-1,100].·If·this··parameter·is·negative,·no·rejection·is·performed.·(float;·default:··10.0)·[default=10.0]. | 150 | ····In·optimal·extraction·mode,·this·is·the·threshold·for·bad·(i.e.··hot/cold)·pixel·rejection.·If·a·pixel·deviates·more·than·kappa*sigma··(where·sigma·is·the·uncertainty·of·the·pixel·flux)·from·the·inferred··spatial·profile,·its·weight·is·set·to·zero.·Range:·[-1,100].·If·this··parameter·is·negative,·no·rejection·is·performed.·(float;·default:··10.0)·[default=10.0]. |
| 155 | ..·py:attribute::·flames_cal_wavecal.param.extract.chunk | 151 | ..·py:attribute::·flames_cal_wavecal.param.extract.chunk |
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| 169 | ····In·optimal·extraction·mode,·the·sky·subtraction·method·to·use.··'median'·estimates·the·sky·as·the·median·of·pixels·along·the·slit··(ignoring·pixels·close·to·the·object),·whereas·'optimal'·does·a·chi··square·minimization·along·the·slit·to·obtain·the·best·combined·object··and·sky·levels.·The·optimal·method·gives·the·most·accurate·sky··determination·but·is·also·a·bit·slower·than·the·median·method·(str;··default:·'optimal')·[default="optimal"]. | 163 | ····In·optimal·extraction·mode,·the·sky·subtraction·method·to·use.··'median'·estimates·the·sky·as·the·median·of·pixels·along·the·slit··(ignoring·pixels·close·to·the·object),·whereas·'optimal'·does·a·chi··square·minimization·along·the·slit·to·obtain·the·best·combined·object··and·sky·levels.·The·optimal·method·gives·the·most·accurate·sky··determination·but·is·also·a·bit·slower·than·the·median·method·(str;··default:·'optimal')·[default="optimal"]. |
| 170 | ..·py:attribute::·flames_cal_wavecal.param.extract.oversample | 164 | ..·py:attribute::·flames_cal_wavecal.param.extract.oversample |
| 171 | ····The·oversampling·factor·used·for·the·virtual·resampling·algorithm.·If··negative,·the·value·5·is·used·for·S/N·<=200,·and·the·value·10·is·used··if·the·estimated·S/N·is·>·200·(int;·default:·-1)·[default=-1]. | 165 | ····The·oversampling·factor·used·for·the·virtual·resampling·algorithm.·If··negative,·the·value·5·is·used·for·S/N·<=200,·and·the·value·10·is·used··if·the·estimated·S/N·is·>·200·(int;·default:·-1)·[default=-1]. |
| 172 | ..·py:attribute::·flames_cal_wavecal.param.extract.best | 166 | ..·py:attribute::·flames_cal_wavecal.param.extract.best |
| 173 | ····(optimal·extraction·only)·If·false·(fastest),·the·spectrum·is··extracted·only·once.·If·true·(best),·the·spectrum·is·extracted·twice,··the·second·time·using·improved·variance·estimates·based·on·the·first··iteration.·Better·variance·estimates·slightly·improve·the·obtained··signal·to·noise·but·at·the·cost·of·increased·execution·time·(bool;··default:·True)·[default=True]. | 167 | ····(optimal·extraction·only)·If·false·(fastest),·the·spectrum·is··extracted·only·once.·If·true·(best),·the·spectrum·is·extracted·twice,··the·second·time·using·improved·variance·estimates·based·on·the·first··iteration.·Better·variance·estimates·slightly·improve·the·obtained··signal·to·noise·but·at·the·cost·of·increased·execution·time·(bool;··default:·True)·[default=True]. |
| 168 | ..·py:attribute::·flames_cal_wavecal.param.rebin.wavestep | ||
| 169 | ····The·bin·size·(in·w.l.u.)·in·wavelength·space.·If·negative,·a·step·size··of·2/3·*·(·average·pixel·size·)·is·used.·(float;·default:·-1.0)·[default=-1.0]. | ||
| 170 | ..·py:attribute::·flames_cal_wavecal.param.rebin.scale | ||
| 171 | ····Whether·or·not·to·multiply·by·the·factor·dx/dlambda·(pixels·per··wavelength)·during·the·rebinning.·This·option·is·disabled·as·default··in·concordance·with·the·method·used·in·the·MIDAS·pipeline.·This·option··should·be·set·to·true·to·convert·the·observed·flux·(in·pixel-space)·to··a·flux·per·wavelength·(in·wavelength-space).·(bool;·default:·False)·[default=False]. | ||
| 174 | The·following·code·snippet·shows·the·default·settings·for·the·available· | 172 | The·following·code·snippet·shows·the·default·settings·for·the·available· |
| 175 | parameters. | 173 | parameters. |
| 176 | :: | 174 | :: |
| Offset 196, 23 lines modified | Offset 196, 23 lines modified | ||
| 196 | ···flames_cal_wavecal.param.shiftstep·=·0.1 | 196 | ···flames_cal_wavecal.param.shiftstep·=·0.1 |
| 197 | ···flames_cal_wavecal.param.shifttoler·=·0.05 | 197 | ···flames_cal_wavecal.param.shifttoler·=·0.05 |
| 198 | ···flames_cal_wavecal.param.alpha·=·0.1 | 198 | ···flames_cal_wavecal.param.alpha·=·0.1 |
| 199 | ···flames_cal_wavecal.param.maxerror·=·20.0 | 199 | ···flames_cal_wavecal.param.maxerror·=·20.0 |
| 200 | ···flames_cal_wavecal.param.degree·=·4 | 200 | ···flames_cal_wavecal.param.degree·=·4 |
| 201 | ···flames_cal_wavecal.param.tolerance·=·0.6 | 201 | ···flames_cal_wavecal.param.tolerance·=·0.6 |
| 202 | ···flames_cal_wavecal.param.kappa·=·4.0 | 202 | ···flames_cal_wavecal.param.kappa·=·4.0 |
| 203 | ···flames_cal_wavecal.param.rebin.wavestep·=·-1.0 | ||
| 204 | ···flames_cal_wavecal.param.rebin.scale·=·False | ||
| 205 | ···flames_cal_wavecal.param.extract.method·=·"average" | 203 | ···flames_cal_wavecal.param.extract.method·=·"average" |
| 206 | ···flames_cal_wavecal.param.extract.kappa·=·10.0 | 204 | ···flames_cal_wavecal.param.extract.kappa·=·10.0 |
| 207 | ···flames_cal_wavecal.param.extract.chunk·=·32 | 205 | ···flames_cal_wavecal.param.extract.chunk·=·32 |
| 208 | ···flames_cal_wavecal.param.extract.profile·=·"auto" | 206 | ···flames_cal_wavecal.param.extract.profile·=·"auto" |
| 209 | ···flames_cal_wavecal.param.extract.skymethod·=·"optimal" | 207 | ···flames_cal_wavecal.param.extract.skymethod·=·"optimal" |
| 210 | ···flames_cal_wavecal.param.extract.oversample·=·-1 | 208 | ···flames_cal_wavecal.param.extract.oversample·=·-1 |
| 211 | ···flames_cal_wavecal.param.extract.best·=·True | 209 | ···flames_cal_wavecal.param.extract.best·=·True |
| 210 | ···flames_cal_wavecal.param.rebin.wavestep·=·-1.0 | ||
| 211 | ···flames_cal_wavecal.param.rebin.scale·=·False | ||
| 212 | You·may·also·set·or·overwrite·some·or·all·parameters·by·the·recipe· | 212 | You·may·also·set·or·overwrite·some·or·all·parameters·by·the·recipe· |
| 213 | parameter·`param`,·as·shown·in·the·following·example: | 213 | parameter·`param`,·as·shown·in·the·following·example: |
| 214 | :: | 214 | :: |
| Offset 62, 125 lines modified | Offset 62, 41 lines modified | ||
| 62 | ····Whether·or·not·to·save·intermediate·results·to·local·directory·(bool;··default:·False)·[default=False]. | 62 | ····Whether·or·not·to·save·intermediate·results·to·local·directory·(bool;··default:·False)·[default=False]. |
| 63 | ..·py:attribute::·flames_obs_redchain.param.plotter | 63 | ..·py:attribute::·flames_obs_redchain.param.plotter |
| 64 | ····Any·plots·produced·by·the·recipe·are·redirected·to·the·command··specified·by·this·parameter.·The·plotting·command·must·contain·the··substring·'gnuplot'·and·must·be·able·to·parse·gnuplot·syntax·on·its··standard·input.·Valid·examples·of·such·a·command·may·include·'gnuplot··-persist'·and·'cat·>·mygnuplot$$.gp'.·A·finer·control·of·the·plotting··options·can·be·obtained·by·writing·an·executable·script,·e.g.··my_gnuplot.pl,·that·executes·gnuplot·after·setting·the·desired·gnuplot··options·(e.g.·set·terminal·pslatex·color).·To·turn·off·plotting,·set··this·parameter·to·'no'·(str;·default:·'no')·[default="no"]. | 64 | ····Any·plots·produced·by·the·recipe·are·redirected·to·the·command··specified·by·this·parameter.·The·plotting·command·must·contain·the··substring·'gnuplot'·and·must·be·able·to·parse·gnuplot·syntax·on·its··standard·input.·Valid·examples·of·such·a·command·may·include·'gnuplot··-persist'·and·'cat·>·mygnuplot$$.gp'.·A·finer·control·of·the·plotting··options·can·be·obtained·by·writing·an·executable·script,·e.g.··my_gnuplot.pl,·that·executes·gnuplot·after·setting·the·desired·gnuplot··options·(e.g.·set·terminal·pslatex·color).·To·turn·off·plotting,·set··this·parameter·to·'no'·(str;·default:·'no')·[default="no"]. |
| 65 | ..·py:attribute::·flames_obs_redchain.param.process_chip | 65 | ..·py:attribute::·flames_obs_redchain.param.process_chip |
| 66 | ····For·RED·arm·data·process·the·redl,·redu,·or·both·chip(s)·(str;··default:·'both')·[default="both"]. | 66 | ····For·RED·arm·data·process·the·redl,·redu,·or·both·chip(s)·(str;··default:·'both')·[default="both"]. |
| 67 | ..·py:attribute::·flames_obs_redchain.param.flames_cal_predict.mbox_x | ||
| 68 | ····Match·box·X·size·(int;·default:·40)·[default=40]. | ||
| 69 | ..·py:attribute::·flames_obs_redchain.param.flames_cal_predict.mbox_y | ||
| 70 | ····Match·box·Y·size·(int;·default:·40)·[default=40]. | ||
| 71 | ..·py:attribute::·flames_obs_redchain.param.flames_cal_predict.trans_x | ||
| 72 | ····Detector·translation·along·X·(float;·default:·0.0)·[default=0.0]. | ||
| 73 | ..·py:attribute::·flames_obs_redchain.param.flames_cal_predict.trans_y | ||
| 74 | ····Detector·translation·along·Y·(float;·default:·0.0)·[default=0.0]. | ||
| 75 | ..·py:attribute::·flames_obs_redchain.param.flames_cal_predict.ech_angle_off | ||
| 76 | ····Offset·on·echelle·angle·(float;·default:·0.0)·[default=0.0]. | ||
| 77 | ..·py:attribute::·flames_obs_redchain.param.flames_cal_predict.cd_angle_off | ||
| 78 | ····Offset·on·cross·disperser·angle·(float;·default:·0.0)·[default=0.0]. | ||
| 79 | ..·py:attribute::·flames_obs_redchain.param.flames_cal_predict.ccd_rot_angle_off | ||
| 80 | ····Offset·on·CCD·rotation·angle·(float;·default:·0.0)·[default=0.0]. | ||
| 81 | ..·py:attribute::·flames_obs_redchain.param.flames_cal_predict.compute_regression_sw | ||
| 82 | ····Compute·regression?·(bool;·default:·True)·[default=True]. | ||
| 83 | ..·py:attribute::·flames_obs_redchain.param.flames_cal_predict.def_pol1 | ||
| 84 | ····Polynomial·X·deg·(int;·default:·4)·[default=4]. | ||
| 85 | ..·py:attribute::·flames_obs_redchain.param.flames_cal_predict.def_pol2 | ||
| 86 | ····Polynomial·Y·deg·(int;·default:·5)·[default=5]. | ||
| 87 | ..·py:attribute::·flames_obs_redchain.param.flames_cal_predict.kappa | ||
| 88 | ····Kappa·value·in·kappa·sigma·clipping·on·RESIDUAL·between·YFIT·and·Y··columns·(float;·default:·4.5)·[default=4.5]. | ||
| 89 | ..·py:attribute::·flames_obs_redchain.param.flames_cal_predict.tol | ||
| 90 | ····Tolerance·in·kappa·sigma·clipping·on·RESIDUAL·between·YFIT·and·Y··columns·(float;·default:·2.0)·[default=2.0]. | ||
| 91 | ..·py:attribute::·flames_obs_redchain.param.flames_ | 67 | ..·py:attribute::·flames_obs_redchain.param.flames_cal_prep_sff_ofpos.ext_method |
| 92 | ····Extraction·method·(str;·default:·'opt')·[default="opt"]. | 68 | ····Extraction·method·(str;·default:·'opt')·[default="opt"]. |
| 93 | ..·py:attribute::·flames_obs_redchain.param.flames_obs_scired.cor_max_fnd | ||
| 94 | ····Find·correlation·maximum?·(str;·default:·'Y')·[default="Y"]. | ||
| 95 | ..·py:attribute::·flames_obs_redchain.param.flames_obs_scired.cor_def_rng | ||
| 96 | ····Correlation·range·size?·(float;·default:·6.0)·[default=6.0]. | ||
| 97 | ..·py:attribute::·flames_obs_redchain.param.flames_obs_scired.cor_def_pnt | ||
| 98 | ····Correlation·sampling·points?·(int;·default:·25)·[default=25]. | ||
| 99 | ..·py:attribute::·flames_obs_redchain.param.flames_obs_scired.cor_def_off | ||
| 100 | ····Correlation·center·offset?·(float;·default:·0.0)·[default=0.0]. | ||
| 101 | ..·py:attribute::·flames_obs_redchain.param.flames_obs_scired.corvel_iter | ||
| 102 | ····Velocity·correlation·iteration·number·(SimCal)·(int;·default:·1)·[default=1]. | ||
| 103 | ..·py:attribute::·flames_obs_redchain.param.flames_ | 69 | ..·py:attribute::·flames_obs_redchain.param.flames_cal_prep_sff_ofpos.bias_method |
| 104 | ····Bias·subtraction·method·(str;·default:·'M')·[default="M"]. | 70 | ····Bias·subtraction·method,·M·for·master·bias·frame,·N·for·no·bias··subtraction,·V·to·subtract·a·constant·bias·level·defined·by·the··parameter·bias_value·(str;·default:·'M')·[default="M"]. |
| 105 | ..·py:attribute::·flames_obs_redchain.param.flames_ | 71 | ..·py:attribute::·flames_obs_redchain.param.flames_cal_prep_sff_ofpos.bias_value |
| 106 | ····Bias·value·(only·if·bias_method·=·V)·(int;·default:·200)·[default=200]. | 72 | ····Bias·value·(only·if·bias_method·=·V)·(int;·default:·200)·[default=200]. |
| 107 | ..·py:attribute::·flames_obs_redchain.param.flames_obs_scired.cubify_sw | ||
| 108 | ····Cubify·switch·(str;·default:·'N')·[default="N"]. | ||
| 109 | ..·py:attribute::·flames_obs_redchain.param.flames_ | 73 | ..·py:attribute::·flames_obs_redchain.param.flames_cal_prep_sff_ofpos.filter_switch |
| 110 | ····Filter·switch·(str;·default:·'none')·[default="none"]. | 74 | ····Filter·switch·(str;·default:·'none')·[default="none"]. |
| 111 | ..·py:attribute::·flames_obs_redchain.param.flames_obs_scired.bkg_max_io_win | ||
| 112 | ····Background·window·number·in·each·full·inter·order·(int;·default:·500)·[default=500]. | ||
| 113 | ..·py:attribute::·flames_obs_redchain.param.flames_obs_scired.bkg_xy_win_sz_x | ||
| 114 | ····x·maximum·size·of·each·background·window:··(int;·default:·6)·[default=6]. | ||
| 115 | ..·py:attribute::·flames_obs_redchain.param.flames_obs_scired.bkg_xy_win_sz_y | ||
| 116 | ····y·maximum·size·of·each·background·window:··(int;·default:·2)·[default=2]. | ||
| 117 | ..·py:attribute::·flames_obs_redchain.param.flames_obs_scired.pixel_thresh_max | ||
| 118 | ····Pixel·saturation·threshold·max·(int;·default:·55000)·[default=55000]. | ||
| 119 | ..·py:attribute::·flames_obs_redchain.param.flames_obs_scired.pixel_thresh_min | ||
| 120 | ····Pixel·saturation·threshold·min·(int;·default:·-20)·[default=-20]. | ||
| 121 | ..·py:attribute::·flames_obs_redchain.param.flames_ | 75 | ..·py:attribute::·flames_obs_redchain.param.flames_cal_prep_sff_ofpos.sat_thr |
| 122 | ····Kappa·sigma·threshold·(float;·default:·10.0)·[default=10.0]. | ||
| 123 | ..·py:attribute::·flames_obs_redchain.param.flames_obs_scired.drs_base_name | ||
| 124 | ····Base·name·for·science·products·(str;·default:·'fxb')·[default="fxb"]. | ||
| 125 | ..·py:attribute::·flames_obs_redchain.param.flames_obs_scired.drs_maxyshift | ||
| 126 | ····Half·width·of·the·interval·to·scan·for·correlation,·when·determining·y··shift·(float;·default:·3.0)·[default=3.0]. | ||
| 127 | ..·py:attribute::·flames_obs_redchain.param.flames_obs_scired.drs_ext_w_siz | ||
| 128 | ···· | 76 | ····Saturation·threshold·(int;·default:·55000)·[default=55000]. |
| 129 | ..·py:attribute::·flames_obs_redchain.param.flames_ | 77 | ..·py:attribute::·flames_obs_redchain.param.flames_cal_prep_sff_ofpos.fileprep |
| 130 | ····Order·merging·method.·If·'optimal',·the·flux·in·the·overlapping·region··is·set·to·the·(optimally·computed,·using·the·uncertainties)·average·of··single·order·spectra.·If·'sum',·the·flux·in·the·overlapping·region·is··computed·as·the·sum·of·the·single·order·spectra.·If·flat-fielding·is··done,·method·'optimal'·is·recommended,·otherwise·'sum'.·(str;·default:··'optimal')·[default="optimal"]. | ||
| 131 | 78 | ····Slitff*·and·Fibreff*·file·preparation.·If·fast·extraction·method·is··used·it·should·be·set·to·FALSE·(bool;·default:·True)·[default=True]. | |
| 79 | ..·py:attribute::·flames_obs_redchain.param.flames_cal_prep_sff_ofpos.cubify | ||
| 132 | ····Order·merging·left·hand·(short·wavelength)·cut.·To·reduce·the·amount··of·order·overlapping·regions·we·allow·to·cut·short·and·long·wavelength··ranges.·This·may·reduce·the·ripple·possibly·introduced·by·the·order··merging.·Suggested·values·are:·10·(W<=390),·12·(390<W<=437,··520<W<=564),·14·(437<W<=520,·564<W<860),·4·(W>=860)··(float;·default:··-1.0)·[default=-1.0]. | ||
| 133 | 80 | ····Cubify·switch·(bool;·default:·True)·[default=True]. | |
| 81 | ..·py:attribute::·flames_obs_redchain.param.flames_cal_prep_sff_ofpos.save_flat_size | ||
| 134 | ···· | 82 | ····To·be·sure·to·use·the·flat·part·of·a·slit·flatsone·may·need·to··subtract·this·bit.·The·default·value·-1,·is·used·for·automatic··setting:·if·WCEN=520·save_flat_size=0,·else·save_flat_size=2.·Values··explicitly·set·by·user·overwrite·this·rule.·(int;·default:·-1)·[default=-1]. |
| 135 | ..·py:attribute::·flames_obs_redchain.param.flames_ | 83 | ..·py:attribute::·flames_obs_redchain.param.flames_cal_prep_sff_ofpos.clean_tmp_products |
| 136 | ····Input·data·format·(bool;·default:·False)·[default=False]. | 84 | ····Input·data·format·(bool;·default:·False)·[default=False]. |
| 137 | ..·py:attribute::·flames_obs_redchain.param.flames_obs_scired.rebin.wavestep | ||
| 138 | ····The·bin·size·(in·w.l.u.)·in·wavelength·space.·If·negative,·a·step·size··of·2/3·*·(·average·pixel·size·)·is·used.·(float;·default:·-1.0)·[default=-1.0]. | ||
| 139 | ..·py:attribute::·flames_obs_redchain.param.flames_obs_scired.rebin.scale | ||
| 140 | ····Whether·or·not·to·multiply·by·the·factor·dx/dlambda·(pixels·per··wavelength)·during·the·rebinning.·This·option·is·disabled·as·default··in·concordance·with·the·method·used·in·the·MIDAS·pipeline.·This·option··should·be·set·to·true·to·convert·the·observed·flux·(in·pixel-space)·to··a·flux·per·wavelength·(in·wavelength-space).·(bool;·default:·False)·[default=False]. | ||
| 141 | ..·py:attribute::·flames_obs_redchain.param.uves_cal_mbias.clean_traps | 85 | ..·py:attribute::·flames_obs_redchain.param.uves_cal_mbias.clean_traps |
| 142 | ····Clean·detector·traps.·If·TRUE·detector·traps·are·interpolated.The·bad··pixels·are·replaced·by·the·average·of·thenearest·good·pixels·in·the··same·column,·or·simply·marked·as·bad.·The·positions·of·bad·pixels·are··hard-coded·(as·function·of·UVES·chip).·(bool;·default:·False)·[default=False]. | 86 | ····Clean·detector·traps.·If·TRUE·detector·traps·are·interpolated.The·bad··pixels·are·replaced·by·the·average·of·thenearest·good·pixels·in·the··same·column,·or·simply·marked·as·bad.·The·positions·of·bad·pixels·are··hard-coded·(as·function·of·UVES·chip).·(bool;·default:·False)·[default=False]. |
| 143 | ..·py:attribute::·flames_obs_redchain.param.uves_cal_mbias.stack_method | 87 | ..·py:attribute::·flames_obs_redchain.param.uves_cal_mbias.stack_method |
| 144 | ····Method·used·to·build·master·frame··(str;·default:·'median')·[default="median"]. | 88 | ····Method·used·to·build·master·frame··(str;·default:·'median')·[default="median"]. |
| 145 | ..·py:attribute::·flames_obs_redchain.param.uves_cal_mbias.klow | 89 | ..·py:attribute::·flames_obs_redchain.param.uves_cal_mbias.klow |
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| 75 | ····For·RED·arm·data·process·the·redl,·redu,·or·both·chip(s)·(str;··default:·'both')·[default="both"]. | 75 | ····For·RED·arm·data·process·the·redl,·redu,·or·both·chip(s)·(str;··default:·'both')·[default="both"]. |
| 76 | ..·py:attribute::·uves_cal_mkmaster.param.clean_traps | 76 | ..·py:attribute::·uves_cal_mkmaster.param.clean_traps |
| 77 | ····Clean·detector·traps.·If·TRUE·detector·traps·are·interpolated.The·bad··pixels·are·replaced·by·the·average·of·thenearest·good·pixels·in·the··same·column,·or·simply·marked·as·bad.·The·positions·of·bad·pixels·are··hard-coded·(as·function·of·UVES·chip).·(bool;·default:·False)·[default=False]. | 77 | ····Clean·detector·traps.·If·TRUE·detector·traps·are·interpolated.The·bad··pixels·are·replaced·by·the·average·of·thenearest·good·pixels·in·the··same·column,·or·simply·marked·as·bad.·The·positions·of·bad·pixels·are··hard-coded·(as·function·of·UVES·chip).·(bool;·default:·False)·[default=False]. |
| 78 | ..·py:attribute::·uves_cal_mkmaster.param.norm_method | 78 | ..·py:attribute::·uves_cal_mkmaster.param.norm_method |
| 79 | ····Method·used·to·build·master·frame··(str;·default:·'explevel')·[default="explevel"]. | 79 | ····Method·used·to·build·master·frame··(str;·default:·'explevel')·[default="explevel"]. |
| 80 | ..·py:attribute::·uves_cal_mkmaster.param.backsub.mmethod | ||
| 81 | ····Background·measuring·method.·If·equal·to·'median'·the·background·is··sampled·using·the·median·of·a·subwindow.·If·'minimum',·the·subwindow··minimum·value·is·used.·If·'no',·no·background·subtraction·is·done.··(str;·default:·'median')·[default="median"]. | ||
| 82 | ..·py:attribute::·uves_cal_mkmaster.param.backsub.npoints | ||
| 83 | ····This·is·the·number·of·columns·in·interorder·space·used·to·sample·the··background.·(int;·default:·82)·[default=82]. | ||
| 84 | ..·py:attribute::·uves_cal_mkmaster.param.backsub.radiusy | ||
| 85 | ····The·height·(in·pixels)·of·the·background·sampling·window·is·(2*radiusy··+·1).·This·parameter·is·not·corrected·for·binning.·(int;·default:·2)·[default=2]. | ||
| 86 | ..·py:attribute::·uves_cal_mkmaster.param.backsub.sdegree | ||
| 87 | ····Degree·of·interpolating·splines.·Currently·only·degree·=·1·is··supported·(int;·default:·1)·[default=1]. | ||
| 88 | ..·py:attribute::·uves_cal_mkmaster.param.backsub.smoothx | ||
| 89 | ····If·spline·interpolation·is·used·to·measure·the·background,·the··x-radius·of·the·post-smoothing·window·is·(smoothx·*·image_width).··Here,·'image_width'·is·the·image·width·after·binning.·If·negative,·the··default·values·are·used:·(25.0/4096)·for·blue·flat-field·frames,··(50.0/4096)·for·red·flat-field·frames,·(300.0/4096)·for·blue·science··frames·and·(300.0/4096)·for·red·science·frames.·(float;·default:·-1.0)·[default=-1.0]. | ||
| 90 | ..·py:attribute::·uves_cal_mkmaster.param.backsub.smoothy | ||
| 91 | ····If·spline·interpolation·is·used·to·measure·the·background,·the··y-radius·of·the·post-smoothing·window·is·(smoothy·*·image_height).··Here,·'image_height'·is·the·image·height·after·binning.·If·negative,··the·default·values·are·used:·(100.0/2048)·for·blue·flat-field·frames,··(300.0/2048)·for·red·flat-field·frames,·(200.0/2048)·for·blue·science··frames·and·(500.0/2048)·for·red·science·frames.·(float;·default:·-1.0)·[default=-1.0]. | ||
| 80 | ..·py:attribute::·uves_cal_mkmaster.param.qc_dark.reg.num_x | 92 | ..·py:attribute::·uves_cal_mkmaster.param.qc_dark.reg.num_x |
| 81 | ····Number·of·regions·along·the·X·axis·(where·mean/med/rms·are·computed).··(int;·default:·4)·[default=4]. | 93 | ····Number·of·regions·along·the·X·axis·(where·mean/med/rms·are·computed).··(int;·default:·4)·[default=4]. |
| 82 | ..·py:attribute::·uves_cal_mkmaster.param.qc_dark.reg.num_y | 94 | ..·py:attribute::·uves_cal_mkmaster.param.qc_dark.reg.num_y |
| 83 | ····Number·of·regions·along·the·Y·axis(where·mean/med/rms·are·computed).··(int;·default:·4)·[default=4]. | 95 | ····Number·of·regions·along·the·Y·axis(where·mean/med/rms·are·computed).··(int;·default:·4)·[default=4]. |
| 84 | ..·py:attribute::·uves_cal_mkmaster.param.qc_dark.reg.box_sx | 96 | ..·py:attribute::·uves_cal_mkmaster.param.qc_dark.reg.box_sx |
| Offset 96, 32 lines modified | Offset 114, 14 lines modified | ||
| 96 | ····X·distance·between·the·left·hand·side·of·the·detector·and·the·left··hand·side·of·the·region·[pix]·(int;·default:·100)·[default=100]. | 114 | ····X·distance·between·the·left·hand·side·of·the·detector·and·the·left··hand·side·of·the·region·[pix]·(int;·default:·100)·[default=100]. |
| 97 | ..·py:attribute::·uves_cal_mkmaster.param.qc_dark.reg.border_y | 115 | ..·py:attribute::·uves_cal_mkmaster.param.qc_dark.reg.border_y |
| 98 | ····X·distance·between·the·left·hand·side·of·the·detector·and·the·left··hand·side·of·the·region·[pix]·(int;·default:·100)·[default=100]. | 116 | ····X·distance·between·the·left·hand·side·of·the·detector·and·the·left··hand·side·of·the·region·[pix]·(int;·default:·100)·[default=100]. |
| 99 | ..·py:attribute::·uves_cal_mkmaster.param.qc_dark.reg.when | 117 | ..·py:attribute::·uves_cal_mkmaster.param.qc_dark.reg.when |
| 100 | ····When·QC·analysis·is·performed.·0:·on·each·raw·frame·or·1:·on·the··master·frame·(int;·default:·0)·[default=0]. | 118 | ····When·QC·analysis·is·performed.·0:·on·each·raw·frame·or·1:·on·the··master·frame·(int;·default:·0)·[default=0]. |
| 101 | ..·py:attribute::·uves_cal_mkmaster.param.backsub.mmethod | ||
| 102 | ····Background·measuring·method.·If·equal·to·'median'·the·background·is··sampled·using·the·median·of·a·subwindow.·If·'minimum',·the·subwindow··minimum·value·is·used.·If·'no',·no·background·subtraction·is·done.··(str;·default:·'median')·[default="median"]. | ||
| 103 | ..·py:attribute::·uves_cal_mkmaster.param.backsub.npoints | ||
| 104 | ····This·is·the·number·of·columns·in·interorder·space·used·to·sample·the··background.·(int;·default:·82)·[default=82]. | ||
| 105 | ..·py:attribute::·uves_cal_mkmaster.param.backsub.radiusy | ||
| 106 | ····The·height·(in·pixels)·of·the·background·sampling·window·is·(2*radiusy··+·1).·This·parameter·is·not·corrected·for·binning.·(int;·default:·2)·[default=2]. | ||
| 107 | ..·py:attribute::·uves_cal_mkmaster.param.backsub.sdegree | ||
| 108 | ····Degree·of·interpolating·splines.·Currently·only·degree·=·1·is··supported·(int;·default:·1)·[default=1]. | ||
| 109 | ..·py:attribute::·uves_cal_mkmaster.param.backsub.smoothx | ||
| 110 | ····If·spline·interpolation·is·used·to·measure·the·background,·the··x-radius·of·the·post-smoothing·window·is·(smoothx·*·image_width).··Here,·'image_width'·is·the·image·width·after·binning.·If·negative,·the··default·values·are·used:·(25.0/4096)·for·blue·flat-field·frames,··(50.0/4096)·for·red·flat-field·frames,·(300.0/4096)·for·blue·science··frames·and·(300.0/4096)·for·red·science·frames.·(float;·default:·-1.0)·[default=-1.0]. | ||
| 111 | ..·py:attribute::·uves_cal_mkmaster.param.backsub.smoothy | ||
| 112 | ····If·spline·interpolation·is·used·to·measure·the·background,·the··y-radius·of·the·post-smoothing·window·is·(smoothy·*·image_height).··Here,·'image_height'·is·the·image·height·after·binning.·If·negative,··the·default·values·are·used:·(100.0/2048)·for·blue·flat-field·frames,··(300.0/2048)·for·red·flat-field·frames,·(200.0/2048)·for·blue·science··frames·and·(500.0/2048)·for·red·science·frames.·(float;·default:·-1.0)·[default=-1.0]. | ||
| 113 | The·following·code·snippet·shows·the·default·settings·for·the·available· | 119 | The·following·code·snippet·shows·the·default·settings·for·the·available· |
| 114 | parameters. | 120 | parameters. |
| 115 | :: | 121 | :: |
| Offset 140, 27 lines modified | Offset 140, 27 lines modified | ||
| 140 | ···uves_cal_mkmaster.param.khigh·=·5.0 | 140 | ···uves_cal_mkmaster.param.khigh·=·5.0 |
| 141 | ···uves_cal_mkmaster.param.niter·=·5 | 141 | ···uves_cal_mkmaster.param.niter·=·5 |
| 142 | ···uves_cal_mkmaster.param.debug·=·False | 142 | ···uves_cal_mkmaster.param.debug·=·False |
| 143 | ···uves_cal_mkmaster.param.plotter·=·"no" | 143 | ···uves_cal_mkmaster.param.plotter·=·"no" |
| 144 | ···uves_cal_mkmaster.param.process_chip·=·"both" | 144 | ···uves_cal_mkmaster.param.process_chip·=·"both" |
| 145 | ···uves_cal_mkmaster.param.clean_traps·=·False | 145 | ···uves_cal_mkmaster.param.clean_traps·=·False |
| 146 | ···uves_cal_mkmaster.param.norm_method·=·"explevel" | 146 | ···uves_cal_mkmaster.param.norm_method·=·"explevel" |
| 147 | ···uves_cal_mkmaster.param.backsub.mmethod·=·"median" | ||
| 148 | ···uves_cal_mkmaster.param.backsub.npoints·=·82 | ||
| 149 | ···uves_cal_mkmaster.param.backsub.radiusy·=·2 | ||
| 150 | ···uves_cal_mkmaster.param.backsub.sdegree·=·1 | ||
| 151 | ···uves_cal_mkmaster.param.backsub.smoothx·=·-1.0 | ||
| 152 | ···uves_cal_mkmaster.param.backsub.smoothy·=·-1.0 | ||
| 147 | ···uves_cal_mkmaster.param.qc_dark.reg.num_x·=·4 | 153 | ···uves_cal_mkmaster.param.qc_dark.reg.num_x·=·4 |
| 148 | ···uves_cal_mkmaster.param.qc_dark.reg.num_y·=·4 | 154 | ···uves_cal_mkmaster.param.qc_dark.reg.num_y·=·4 |
| 149 | ···uves_cal_mkmaster.param.qc_dark.reg.box_sx·=·100 | 155 | ···uves_cal_mkmaster.param.qc_dark.reg.box_sx·=·100 |
| 150 | ···uves_cal_mkmaster.param.qc_dark.reg.box_sy·=·100 | 156 | ···uves_cal_mkmaster.param.qc_dark.reg.box_sy·=·100 |
| 151 | ···uves_cal_mkmaster.param.qc_dark.reg.border_x·=·100 | 157 | ···uves_cal_mkmaster.param.qc_dark.reg.border_x·=·100 |
| 152 | ···uves_cal_mkmaster.param.qc_dark.reg.border_y·=·100 | 158 | ···uves_cal_mkmaster.param.qc_dark.reg.border_y·=·100 |
| 153 | ···uves_cal_mkmaster.param.qc_dark.reg.when·=·0 | 159 | ···uves_cal_mkmaster.param.qc_dark.reg.when·=·0 |
| 154 | ···uves_cal_mkmaster.param.backsub.mmethod·=·"median" | ||
| 155 | ···uves_cal_mkmaster.param.backsub.npoints·=·82 | ||
| 156 | ···uves_cal_mkmaster.param.backsub.radiusy·=·2 | ||
| 157 | ···uves_cal_mkmaster.param.backsub.sdegree·=·1 | ||
| 158 | ···uves_cal_mkmaster.param.backsub.smoothx·=·-1.0 | ||
| 159 | ···uves_cal_mkmaster.param.backsub.smoothy·=·-1.0 | ||
| 160 | You·may·also·set·or·overwrite·some·or·all·parameters·by·the·recipe· | 160 | You·may·also·set·or·overwrite·some·or·all·parameters·by·the·recipe· |
| 161 | parameter·`param`,·as·shown·in·the·following·example: | 161 | parameter·`param`,·as·shown·in·the·following·example: |
| 162 | :: | 162 | :: |
| Offset 70, 26 lines modified | Offset 70, 14 lines modified | ||
| 70 | ····Any·plots·produced·by·the·recipe·are·redirected·to·the·command··specified·by·this·parameter.·The·plotting·command·must·contain·the··substring·'gnuplot'·and·must·be·able·to·parse·gnuplot·syntax·on·its··standard·input.·Valid·examples·of·such·a·command·may·include·'gnuplot··-persist'·and·'cat·>·mygnuplot$$.gp'.·A·finer·control·of·the·plotting··options·can·be·obtained·by·writing·an·executable·script,·e.g.··my_gnuplot.pl,·that·executes·gnuplot·after·setting·the·desired·gnuplot··options·(e.g.·set·terminal·pslatex·color).·To·turn·off·plotting,·set··this·parameter·to·'no'·(str;·default:·'no')·[default="no"]. | 70 | ····Any·plots·produced·by·the·recipe·are·redirected·to·the·command··specified·by·this·parameter.·The·plotting·command·must·contain·the··substring·'gnuplot'·and·must·be·able·to·parse·gnuplot·syntax·on·its··standard·input.·Valid·examples·of·such·a·command·may·include·'gnuplot··-persist'·and·'cat·>·mygnuplot$$.gp'.·A·finer·control·of·the·plotting··options·can·be·obtained·by·writing·an·executable·script,·e.g.··my_gnuplot.pl,·that·executes·gnuplot·after·setting·the·desired·gnuplot··options·(e.g.·set·terminal·pslatex·color).·To·turn·off·plotting,·set··this·parameter·to·'no'·(str;·default:·'no')·[default="no"]. |
| 71 | ..·py:attribute::·uves_cal_response.param.process_chip | 71 | ..·py:attribute::·uves_cal_response.param.process_chip |
| 72 | ····For·RED·arm·data·process·the·redl,·redu,·or·both·chip(s)·(str;··default:·'both')·[default="both"]. | 72 | ····For·RED·arm·data·process·the·redl,·redu,·or·both·chip(s)·(str;··default:·'both')·[default="both"]. |
| 73 | ..·py:attribute::·uves_cal_response.param.paccuracy | 73 | ..·py:attribute::·uves_cal_response.param.paccuracy |
| 74 | ····The·pointing·accuracy·(in·arcseconds)·used·to·identify·the·observed··star·with·a·catalogue·star.·If·the·angular·separation·is·less·than··this·number,·the·identification·is·made.·(float;·default:·60.0)·[default=60.0]. | 74 | ····The·pointing·accuracy·(in·arcseconds)·used·to·identify·the·observed··star·with·a·catalogue·star.·If·the·angular·separation·is·less·than··this·number,·the·identification·is·made.·(float;·default:·60.0)·[default=60.0]. |
| 75 | ..·py:attribute::·uves_cal_response.param.efficiency.reduce.ffmethod | ||
| 76 | ····Flat-fielding·method.·If·set·to·'pixel',·flat-fielding·is·done·in··pixel-pixel·space·(before·extraction);·if·set·to·'extract',·flat-··fielding·is·performed·in·pixel-order·space·(i.e.·after·extraction).·If··set·to·'no',·no·flat-field·correction·is·done.·<pixel·|·extract·|·no>··(str;·default:·'no')·[default="no"]. | ||
| 77 | ..·py:attribute::·uves_cal_response.param.efficiency.reduce.merge | ||
| 78 | ····Order·merging·method.·If·'optimal',·the·flux·in·the·overlapping·region··is·set·to·the·(optimally·computed,·using·the·uncertainties)·average·of··single·order·spectra.·If·'sum',·the·flux·in·the·overlapping·region·is··computed·as·the·sum·of·the·single·order·spectra.If·'noappend'·the··spectrum·is·simply·rebinned·but·not·merged.If·flat-fielding·is·done,··method·'optimal'·is·recommended,·otherwise·'sum'.·<optimal·|·sum·|··noappend>·(str;·default:·'sum')·[default="sum"]. | ||
| 79 | ..·py:attribute::·uves_cal_response.param.efficiency.reduce.best | ||
| 80 | ····(optimal·extraction·only)·If·false·(fastest),·the·spectrum·is··extracted·only·once.·If·true·(best),·the·spectrum·is·extracted·twice,··the·second·time·using·improved·variance·estimates·based·on·the·first··iteration.·Better·variance·estimates·slightly·improve·the·obtained··signal·to·noise·but·at·the·cost·of·increased·execution·time·(bool;··default:·True)·[default=True]. | ||
| 81 | ..·py:attribute::·uves_cal_response.param.efficiency.reduce.extract.method | ||
| 82 | ····Extraction·method.·<average·|·linear·|·weighted·|·optimal>·(str;··default:·'linear')·[default="linear"]. | ||
| 83 | ..·py:attribute::·uves_cal_response.param.reduce.slitlength | 75 | ..·py:attribute::·uves_cal_response.param.reduce.slitlength |
| 84 | ····Extraction·slit·length·(in·pixels).·If·negative,·the·value·inferred··from·the·raw·frame·header·is·used·(float;·default:·-1.0)·[default=-1.0]. | 76 | ····Extraction·slit·length·(in·pixels).·If·negative,·the·value·inferred··from·the·raw·frame·header·is·used·(float;·default:·-1.0)·[default=-1.0]. |
| 85 | ..·py:attribute::·uves_cal_response.param.reduce.skysub | 77 | ..·py:attribute::·uves_cal_response.param.reduce.skysub |
| 86 | ····Do·sky-subtraction·(only·applicable·to·linear·and·average··extractions)?·(bool;·default:·True)·[default=True]. | 78 | ····Do·sky-subtraction·(only·applicable·to·linear·and·average··extractions)?·(bool;·default:·True)·[default=True]. |
| 87 | ..·py:attribute::·uves_cal_response.param.reduce.objoffset | 79 | ..·py:attribute::·uves_cal_response.param.reduce.objoffset |
| Offset 109, 14 lines modified | Offset 97, 35 lines modified | ||
| 109 | ····Order·merging·method.·If·'optimal',·the·flux·in·the·overlapping·region··is·set·to·the·(optimally·computed,·using·the·uncertainties)·average·of··single·order·spectra.·If·'sum',·the·flux·in·the·overlapping·region·is··computed·as·the·sum·of·the·single·order·spectra.·If·'noappend'·the··spectrum·is·simply·rebinned·but·not·merged.If·flat-fielding·is·done,··method·'optimal'·is·recommended,·otherwise·'sum'.·(str;·default:··'optimal')·[default="optimal"]. | 97 | ····Order·merging·method.·If·'optimal',·the·flux·in·the·overlapping·region··is·set·to·the·(optimally·computed,·using·the·uncertainties)·average·of··single·order·spectra.·If·'sum',·the·flux·in·the·overlapping·region·is··computed·as·the·sum·of·the·single·order·spectra.·If·'noappend'·the··spectrum·is·simply·rebinned·but·not·merged.If·flat-fielding·is·done,··method·'optimal'·is·recommended,·otherwise·'sum'.·(str;·default:··'optimal')·[default="optimal"]. |
| 110 | ..·py:attribute::·uves_cal_response.param.reduce.merge_delt1 | 98 | ..·py:attribute::·uves_cal_response.param.reduce.merge_delt1 |
| 111 | ····Order·merging·left·hand·(short·wavelength)·cut.·To·reduce·the·amount··of·order·overlapping·regions·we·allow·to·cut·short·and·long·wavelength··ranges.·This·may·reduce·the·ripple·possibly·introduced·by·the·order··merging.·Suggested·values·are:·10·(W<=390),·12·(390<W<=437,··520<W<=564),·14·(437<W<=520,·564<W)··(float;·default:·0.0)·[default=0.0]. | 99 | ····Order·merging·left·hand·(short·wavelength)·cut.·To·reduce·the·amount··of·order·overlapping·regions·we·allow·to·cut·short·and·long·wavelength··ranges.·This·may·reduce·the·ripple·possibly·introduced·by·the·order··merging.·Suggested·values·are:·10·(W<=390),·12·(390<W<=437,··520<W<=564),·14·(437<W<=520,·564<W)··(float;·default:·0.0)·[default=0.0]. |
| 112 | ..·py:attribute::·uves_cal_response.param.reduce.merge_delt2 | 100 | ..·py:attribute::·uves_cal_response.param.reduce.merge_delt2 |
| 113 | ····Order·merging·right·hand·(long·wavelength)·cut.·To·reduce·the·amount··of·order·overlapping·regions·we·allow·to·cut·short·and·long·wavelength··ranges.·This·may·reduce·the·ripple·possibly·introduced·by·the·order··merging.·Suggested·values·is·4·(float;·default:·0.0)·[default=0.0]. | 101 | ····Order·merging·right·hand·(long·wavelength)·cut.·To·reduce·the·amount··of·order·overlapping·regions·we·allow·to·cut·short·and·long·wavelength··ranges.·This·may·reduce·the·ripple·possibly·introduced·by·the·order··merging.·Suggested·values·is·4·(float;·default:·0.0)·[default=0.0]. |
| 102 | ..·py:attribute::·uves_cal_response.param.reduce.extract.method | ||
| 103 | ····Extraction·method.·(2d/optimal·not·supported·by·uves_cal_wavecal,··weighted·supported·only·by·uves_cal_wavecal,·2d·not·supported·by··uves_cal_response)·(str;·default:·'optimal')·[default="optimal"]. | ||
| 104 | ..·py:attribute::·uves_cal_response.param.reduce.extract.kappa | ||
| 105 | ····In·optimal·extraction·mode,·this·is·the·threshold·for·bad·(i.e.··hot/cold)·pixel·rejection.·If·a·pixel·deviates·more·than·kappa*sigma··(where·sigma·is·the·uncertainty·of·the·pixel·flux)·from·the·inferred··spatial·profile,·its·weight·is·set·to·zero.·Range:·[-1,100].·If·this··parameter·is·negative,·no·rejection·is·performed.·(float;·default:··10.0)·[default=10.0]. | ||
| 106 | ..·py:attribute::·uves_cal_response.param.reduce.extract.chunk | ||
| 107 | ····In·optimal·extraction·mode,·the·chunk·size·(in·pixels)·used·for··fitting·the·analytical·profile·(a·fit·of·the·analytical·profile·to··single·bins·would·suffer·from·low·statistics).·(int;·default:·32)·[default=32]. | ||
| 108 | ..·py:attribute::·uves_cal_response.param.reduce.extract.profile | ||
| 109 | ····In·optimal·extraction·mode,·the·kind·of·profile·to·use.·'gauss'·gives··a·Gaussian·profile,·'moffat'·gives·a·Moffat·profile·with·beta=4·and·a··possible·linear·sky·contribution.·'virtual'·uses·a·virtual·resampling··algorithm·(i.e.·measures·and·uses·the·actual·object·profile).··'constant'·assumes·a·constant·spatial·profile·and·allows·optimal··extraction·of·wavelength·calibration·frames.·'auto'·will·automatically··select·the·best·method·based·on·the·estimated·S/N·of·the·object.·For··low·S/N,·'moffat'·or·'gauss'·are·recommended·(for·robustness).·For··high·S/N,·'virtual'·is·recommended·(for·accuracy).·In·the·case·of··virtual·resampling,·a·precise·determination·of·the·order·positions·is··required;·therefore·the·order-definition·is·repeated·using·the··(assumed·non-low·S/N)·science·frame·(str;·default:·'auto')·[default="auto"]. | ||
| 110 | ..·py:attribute::·uves_cal_response.param.reduce.extract.skymethod | ||
| 111 | ····In·optimal·extraction·mode,·the·sky·subtraction·method·to·use.··'median'·estimates·the·sky·as·the·median·of·pixels·along·the·slit··(ignoring·pixels·close·to·the·object),·whereas·'optimal'·does·a·chi··square·minimization·along·the·slit·to·obtain·the·best·combined·object··and·sky·levels.·The·optimal·method·gives·the·most·accurate·sky··determination·but·is·also·a·bit·slower·than·the·median·method·(str;··default:·'optimal')·[default="optimal"]. | ||
| 112 | ..·py:attribute::·uves_cal_response.param.reduce.extract.oversample | ||
| 113 | ····The·oversampling·factor·used·for·the·virtual·resampling·algorithm.·If··negative,·the·value·5·is·used·for·S/N·<=200,·and·the·value·10·is·used··if·the·estimated·S/N·is·>·200·(int;·default:·-1)·[default=-1]. | ||
| 114 | ..·py:attribute::·uves_cal_response.param.reduce.extract.best | ||
| 115 | ····(optimal·extraction·only)·If·false·(fastest),·the·spectrum·is··extracted·only·once.·If·true·(best),·the·spectrum·is·extracted·twice,··the·second·time·using·improved·variance·estimates·based·on·the·first··iteration.·Better·variance·estimates·slightly·improve·the·obtained··signal·to·noise·but·at·the·cost·of·increased·execution·time·(bool;··default:·True)·[default=True]. | ||
| 114 | ..·py:attribute::·uves_cal_response.param.reduce.rebin.wavestep | 116 | ..·py:attribute::·uves_cal_response.param.reduce.rebin.wavestep |
| 115 | ····The·bin·size·(in·w.l.u.)·in·wavelength·space.·If·negative,·a·step·size··of·2/3·*·(·average·pixel·size·)·is·used.·(float;·default:·-1.0)·[default=-1.0]. | 117 | ····The·bin·size·(in·w.l.u.)·in·wavelength·space.·If·negative,·a·step·size··of·2/3·*·(·average·pixel·size·)·is·used.·(float;·default:·-1.0)·[default=-1.0]. |
| 116 | ..·py:attribute::·uves_cal_response.param.reduce.rebin.scale | 118 | ..·py:attribute::·uves_cal_response.param.reduce.rebin.scale |
| 117 | ····Whether·or·not·to·multiply·by·the·factor·dx/dlambda·(pixels·per··wavelength)·during·the·rebinning.·This·option·is·disabled·as·default··in·concordance·with·the·method·used·in·the·MIDAS·pipeline.·This·option··should·be·set·to·true·to·convert·the·observed·flux·(in·pixel-space)·to··a·flux·per·wavelength·(in·wavelength-space).·(bool;·default:·False)·[default=False]. | 119 | ····Whether·or·not·to·multiply·by·the·factor·dx/dlambda·(pixels·per··wavelength)·during·the·rebinning.·This·option·is·disabled·as·default··in·concordance·with·the·method·used·in·the·MIDAS·pipeline.·This·option··should·be·set·to·true·to·convert·the·observed·flux·(in·pixel-space)·to··a·flux·per·wavelength·(in·wavelength-space).·(bool;·default:·False)·[default=False]. |
| 118 | ..·py:attribute::·uves_cal_response.param.reduce.backsub.mmethod | 120 | ..·py:attribute::·uves_cal_response.param.reduce.backsub.mmethod |
| Offset 133, 77 lines modified | Offset 142, 68 lines modified | ||
| 133 | ····Degree·of·interpolating·splines.·Currently·only·degree·=·1·is··supported·(int;·default:·1)·[default=1]. | 142 | ····Degree·of·interpolating·splines.·Currently·only·degree·=·1·is··supported·(int;·default:·1)·[default=1]. |
| 134 | ..·py:attribute::·uves_cal_response.param.reduce.backsub.smoothx | 143 | ..·py:attribute::·uves_cal_response.param.reduce.backsub.smoothx |
| 135 | ····If·spline·interpolation·is·used·to·measure·the·background,·the··x-radius·of·the·post-smoothing·window·is·(smoothx·*·image_width).··Here,·'image_width'·is·the·image·width·after·binning.·If·negative,·the··default·values·are·used:·(25.0/4096)·for·blue·flat-field·frames,··(50.0/4096)·for·red·flat-field·frames,·(300.0/4096)·for·blue·science··frames·and·(300.0/4096)·for·red·science·frames.·(float;·default:·-1.0)·[default=-1.0]. | 144 | ····If·spline·interpolation·is·used·to·measure·the·background,·the··x-radius·of·the·post-smoothing·window·is·(smoothx·*·image_width).··Here,·'image_width'·is·the·image·width·after·binning.·If·negative,·the··default·values·are·used:·(25.0/4096)·for·blue·flat-field·frames,··(50.0/4096)·for·red·flat-field·frames,·(300.0/4096)·for·blue·science··frames·and·(300.0/4096)·for·red·science·frames.·(float;·default:·-1.0)·[default=-1.0]. |
| 136 | ..·py:attribute::·uves_cal_response.param.reduce.backsub.smoothy | 145 | ..·py:attribute::·uves_cal_response.param.reduce.backsub.smoothy |
| 137 | ····If·spline·interpolation·is·used·to·measure·the·background,·the··y-radius·of·the·post-smoothing·window·is·(smoothy·*·image_height).··Here,·'image_height'·is·the·image·height·after·binning.·If·negative,··the·default·values·are·used:·(100.0/2048)·for·blue·flat-field·frames,··(300.0/2048)·for·red·flat-field·frames,·(200.0/2048)·for·blue·science··frames·and·(500.0/2048)·for·red·science·frames.·(float;·default:·-1.0)·[default=-1.0]. | 146 | ····If·spline·interpolation·is·used·to·measure·the·background,·the··y-radius·of·the·post-smoothing·window·is·(smoothy·*·image_height).··Here,·'image_height'·is·the·image·height·after·binning.·If·negative,··the·default·values·are·used:·(100.0/2048)·for·blue·flat-field·frames,··(300.0/2048)·for·red·flat-field·frames,·(200.0/2048)·for·blue·science··frames·and·(500.0/2048)·for·red·science·frames.·(float;·default:·-1.0)·[default=-1.0]. |
| 138 | ..·py:attribute::·uves_cal_response.param. | 147 | ..·py:attribute::·uves_cal_response.param.efficiency.reduce.ffmethod |
| 139 | ····Extraction·method.·(2d/optimal·not·supported·by·uves_cal_wavecal,··weighted·supported·only·by·uves_cal_wavecal,·2d·not·supported·by··uves_cal_response)·(str;·default:·'optimal')·[default="optimal"]. | ||
| 140 | ..·py:attribute::·uves_cal_response.param.reduce.extract.kappa | ||
| 141 | ····In·optimal·extraction·mode,·this·is·the·threshold·for·bad·(i.e.··hot/cold)·pixel·rejection.·If·a·pixel·deviates·more·than·kappa*sigma··(where·sigma·is·the·uncertainty·of·the·pixel·flux)·from·the·inferred··spatial·profile,·its·weight·is·set·to·zero.·Range:·[-1,100].·If·this··parameter·is·negative,·no·rejection·is·performed.·(float;·default:··10.0)·[default=10.0]. | ||
| 142 | ..·py:attribute::·uves_cal_response.param.reduce.extract.chunk | ||
| 143 | ····In·optimal·extraction·mode,·the·chunk·size·(in·pixels)·used·for··fitting·the·analytical·profile·(a·fit·of·the·analytical·profile·to··single·bins·would·suffer·from·low·statistics).·(int;·default:·32)·[default=32]. | ||
| 144 | ..·py:attribute::·uves_cal_response.param.reduce.extract.profile | ||
| 145 | ····In·optimal·extraction·mode,·the·kind·of·profile·to·use.·'gauss'·gives··a·Gaussian·profile,·'moffat'·gives·a·Moffat·profile·with·beta=4·and·a··possible·linear·sky·contribution.·'virtual'·uses·a·virtual·resampling··algorithm·(i.e.·measures·and·uses·the·actual·object·profile).··'constant'·assumes·a·constant·spatial·profile·and·allows·optimal··extraction·of·wavelength·calibration·frames.·'auto'·will·automatically··select·the·best·method·based·on·the·estimated·S/N·of·the·object.·For··low·S/N,·'moffat'·or·'gauss'·are·recommended·(for·robustness).·For··high·S/N,·'virtual'·is·recommended·(for·accuracy).·In·the·case·of··virtual·resampling,·a·precise·determination·of·the·order·positions·is··required;·therefore·the·order-definition·is·repeated·using·the··(assumed·non-low·S/N)·science·frame·(str;·default:·'auto')·[default="auto"]. | ||
| 146 | ..·py:attribute::·uves_cal_response.param.reduce.extract.skymethod | ||
| 147 | ···· | 148 | ····Flat-fielding·method.·If·set·to·'pixel',·flat-fielding·is·done·in··pixel-pixel·space·(before·extraction);·if·set·to·'extract',·flat-··fielding·is·performed·in·pixel-order·space·(i.e.·after·extraction).·If··set·to·'no',·no·flat-field·correction·is·done.·<pixel·|·extract·|·no>··(str;·default:·'no')·[default="no"]. |
| 148 | ..·py:attribute::·uves_cal_response.param. | 149 | ..·py:attribute::·uves_cal_response.param.efficiency.reduce.merge |
| 149 | ···· | 150 | ····Order·merging·method.·If·'optimal',·the·flux·in·the·overlapping·region··is·set·to·the·(optimally·computed,·using·the·uncertainties)·average·of··single·order·spectra.·If·'sum',·the·flux·in·the·overlapping·region·is··computed·as·the·sum·of·the·single·order·spectra.If·'noappend'·the··spectrum·is·simply·rebinned·but·not·merged.If·flat-fielding·is·done,··method·'optimal'·is·recommended,·otherwise·'sum'.·<optimal·|·sum·|··noappend>·(str;·default:·'sum')·[default="sum"]. |
| 150 | ..·py:attribute::·uves_cal_response.param. | 151 | ..·py:attribute::·uves_cal_response.param.efficiency.reduce.best |
| 151 | ····(optimal·extraction·only)·If·false·(fastest),·the·spectrum·is··extracted·only·once.·If·true·(best),·the·spectrum·is·extracted·twice,··the·second·time·using·improved·variance·estimates·based·on·the·first··iteration.·Better·variance·estimates·slightly·improve·the·obtained··signal·to·noise·but·at·the·cost·of·increased·execution·time·(bool;··default:·True)·[default=True]. | 152 | ····(optimal·extraction·only)·If·false·(fastest),·the·spectrum·is··extracted·only·once.·If·true·(best),·the·spectrum·is·extracted·twice,··the·second·time·using·improved·variance·estimates·based·on·the·first··iteration.·Better·variance·estimates·slightly·improve·the·obtained··signal·to·noise·but·at·the·cost·of·increased·execution·time·(bool;··default:·True)·[default=True]. |
| 153 | ..·py:attribute::·uves_cal_response.param.efficiency.reduce.extract.method | ||
| 154 | ····Extraction·method.·<average·|·linear·|·weighted·|·optimal>·(str;··default:·'linear')·[default="linear"]. | ||
| 152 | The·following·code·snippet·shows·the·default·settings·for·the·available· | 155 | The·following·code·snippet·shows·the·default·settings·for·the·available· |
| 153 | parameters. | 156 | parameters. |
| 154 | :: | 157 | :: |
| 155 | ···import·cpl | 158 | ···import·cpl |
| 156 | ···uves_cal_response·=·cpl.Recipe("uves_cal_response") | 159 | ···uves_cal_response·=·cpl.Recipe("uves_cal_response") |
| 157 | ···uves_cal_response.param.debug·=·False | 160 | ···uves_cal_response.param.debug·=·False |
| 158 | ···uves_cal_response.param.plotter·=·"no" | 161 | ···uves_cal_response.param.plotter·=·"no" |
| 159 | ···uves_cal_response.param.process_chip·=·"both" | 162 | ···uves_cal_response.param.process_chip·=·"both" |
| 160 | ···uves_cal_response.param.paccuracy·=·60.0 | 163 | ···uves_cal_response.param.paccuracy·=·60.0 |
| 161 | ···uves_cal_response.param.efficiency.reduce.ffmethod·=·"no" | ||
| 162 | ···uves_cal_response.param.efficiency.reduce.merge·=·"sum" | ||
| 163 | ···uves_cal_response.param.efficiency.reduce.best·=·True | ||
| 164 | ···uves_cal_response.param.efficiency.reduce.extract.method·=·"linear" | ||
| 165 | ···uves_cal_response.param.reduce.slitlength·=·-1.0 | 164 | ···uves_cal_response.param.reduce.slitlength·=·-1.0 |
| 166 | ···uves_cal_response.param.reduce.skysub·=·True | 165 | ···uves_cal_response.param.reduce.skysub·=·True |
| 167 | ···uves_cal_response.param.reduce.objoffset·=·0.0 | 166 | ···uves_cal_response.param.reduce.objoffset·=·0.0 |
| 168 | ···uves_cal_response.param.reduce.objslit·=·-1.0 | 167 | ···uves_cal_response.param.reduce.objslit·=·-1.0 |
| 169 | ···uves_cal_response.param.reduce.tiltcorr·=·True | 168 | ···uves_cal_response.param.reduce.tiltcorr·=·True |
| 170 | ···uves_cal_response.param.reduce.ffmethod·=·"extract" | 169 | ···uves_cal_response.param.reduce.ffmethod·=·"extract" |
| 171 | ···uves_cal_response.param.reduce.merge·=·"optimal" | 170 | ···uves_cal_response.param.reduce.merge·=·"optimal" |
| 172 | ···uves_cal_response.param.reduce.merge_delt1·=·0.0 | 171 | ···uves_cal_response.param.reduce.merge_delt1·=·0.0 |
| 173 | ···uves_cal_response.param.reduce.merge_delt2·=·0.0 | 172 | ···uves_cal_response.param.reduce.merge_delt2·=·0.0 |
| 173 | ···uves_cal_response.param.reduce.extract.method·=·"optimal" | ||
| 174 | ···uves_cal_response.param.reduce.extract.kappa·=·10.0 | ||
| 175 | ···uves_cal_response.param.reduce.extract.chunk·=·32 | ||
| 176 | ···uves_cal_response.param.reduce.extract.profile·=·"auto" | ||
| 177 | ···uves_cal_response.param.reduce.extract.skymethod·=·"optimal" | ||
| 178 | ···uves_cal_response.param.reduce.extract.oversample·=·-1 | ||
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| Offset 92, 14 lines modified | Offset 92, 35 lines modified | ||
| 92 | ····Order·merging·method.·If·'optimal',·the·flux·in·the·overlapping·region··is·set·to·the·(optimally·computed,·using·the·uncertainties)·average·of··single·order·spectra.·If·'sum',·the·flux·in·the·overlapping·region·is··computed·as·the·sum·of·the·single·order·spectra.·If·'noappend'·the··spectrum·is·simply·rebinned·but·not·merged.If·flat-fielding·is·done,··method·'optimal'·is·recommended,·otherwise·'sum'.·(str;·default:··'optimal')·[default="optimal"]. | 92 | ····Order·merging·method.·If·'optimal',·the·flux·in·the·overlapping·region··is·set·to·the·(optimally·computed,·using·the·uncertainties)·average·of··single·order·spectra.·If·'sum',·the·flux·in·the·overlapping·region·is··computed·as·the·sum·of·the·single·order·spectra.·If·'noappend'·the··spectrum·is·simply·rebinned·but·not·merged.If·flat-fielding·is·done,··method·'optimal'·is·recommended,·otherwise·'sum'.·(str;·default:··'optimal')·[default="optimal"]. |
| 93 | ..·py:attribute::·uves_cal_tflat.param.reduce.merge_delt1 | 93 | ..·py:attribute::·uves_cal_tflat.param.reduce.merge_delt1 |
| 94 | ····Order·merging·left·hand·(short·wavelength)·cut.·To·reduce·the·amount··of·order·overlapping·regions·we·allow·to·cut·short·and·long·wavelength··ranges.·This·may·reduce·the·ripple·possibly·introduced·by·the·order··merging.·Suggested·values·are:·10·(W<=390),·12·(390<W<=437,··520<W<=564),·14·(437<W<=520,·564<W)··(float;·default:·0.0)·[default=0.0]. | 94 | ····Order·merging·left·hand·(short·wavelength)·cut.·To·reduce·the·amount··of·order·overlapping·regions·we·allow·to·cut·short·and·long·wavelength··ranges.·This·may·reduce·the·ripple·possibly·introduced·by·the·order··merging.·Suggested·values·are:·10·(W<=390),·12·(390<W<=437,··520<W<=564),·14·(437<W<=520,·564<W)··(float;·default:·0.0)·[default=0.0]. |
| 95 | ..·py:attribute::·uves_cal_tflat.param.reduce.merge_delt2 | 95 | ..·py:attribute::·uves_cal_tflat.param.reduce.merge_delt2 |
| 96 | ····Order·merging·right·hand·(long·wavelength)·cut.·To·reduce·the·amount··of·order·overlapping·regions·we·allow·to·cut·short·and·long·wavelength··ranges.·This·may·reduce·the·ripple·possibly·introduced·by·the·order··merging.·Suggested·values·is·4·(float;·default:·0.0)·[default=0.0]. | 96 | ····Order·merging·right·hand·(long·wavelength)·cut.·To·reduce·the·amount··of·order·overlapping·regions·we·allow·to·cut·short·and·long·wavelength··ranges.·This·may·reduce·the·ripple·possibly·introduced·by·the·order··merging.·Suggested·values·is·4·(float;·default:·0.0)·[default=0.0]. |
| 97 | ..·py:attribute::·uves_cal_tflat.param.reduce.extract.method | ||
| 98 | ····Extraction·method.·(2d/optimal·not·supported·by·uves_cal_wavecal,··weighted·supported·only·by·uves_cal_wavecal,·2d·not·supported·by··uves_cal_response)·(str;·default:·'average')·[default="average"]. | ||
| 99 | ..·py:attribute::·uves_cal_tflat.param.reduce.extract.kappa | ||
| 100 | ····In·optimal·extraction·mode,·this·is·the·threshold·for·bad·(i.e.··hot/cold)·pixel·rejection.·If·a·pixel·deviates·more·than·kappa*sigma··(where·sigma·is·the·uncertainty·of·the·pixel·flux)·from·the·inferred··spatial·profile,·its·weight·is·set·to·zero.·Range:·[-1,100].·If·this··parameter·is·negative,·no·rejection·is·performed.·(float;·default:··10.0)·[default=10.0]. | ||
| 101 | ..·py:attribute::·uves_cal_tflat.param.reduce.extract.chunk | ||
| 102 | ····In·optimal·extraction·mode,·the·chunk·size·(in·pixels)·used·for··fitting·the·analytical·profile·(a·fit·of·the·analytical·profile·to··single·bins·would·suffer·from·low·statistics).·(int;·default:·32)·[default=32]. | ||
| 103 | ..·py:attribute::·uves_cal_tflat.param.reduce.extract.profile | ||
| 104 | ····In·optimal·extraction·mode,·the·kind·of·profile·to·use.·'gauss'·gives··a·Gaussian·profile,·'moffat'·gives·a·Moffat·profile·with·beta=4·and·a··possible·linear·sky·contribution.·'virtual'·uses·a·virtual·resampling··algorithm·(i.e.·measures·and·uses·the·actual·object·profile).··'constant'·assumes·a·constant·spatial·profile·and·allows·optimal··extraction·of·wavelength·calibration·frames.·'auto'·will·automatically··select·the·best·method·based·on·the·estimated·S/N·of·the·object.·For··low·S/N,·'moffat'·or·'gauss'·are·recommended·(for·robustness).·For··high·S/N,·'virtual'·is·recommended·(for·accuracy).·In·the·case·of··virtual·resampling,·a·precise·determination·of·the·order·positions·is··required;·therefore·the·order-definition·is·repeated·using·the··(assumed·non-low·S/N)·science·frame·(str;·default:·'auto')·[default="auto"]. | ||
| 105 | ..·py:attribute::·uves_cal_tflat.param.reduce.extract.skymethod | ||
| 106 | ····In·optimal·extraction·mode,·the·sky·subtraction·method·to·use.··'median'·estimates·the·sky·as·the·median·of·pixels·along·the·slit··(ignoring·pixels·close·to·the·object),·whereas·'optimal'·does·a·chi··square·minimization·along·the·slit·to·obtain·the·best·combined·object··and·sky·levels.·The·optimal·method·gives·the·most·accurate·sky··determination·but·is·also·a·bit·slower·than·the·median·method·(str;··default:·'optimal')·[default="optimal"]. | ||
| 107 | ..·py:attribute::·uves_cal_tflat.param.reduce.extract.oversample | ||
| 108 | ····The·oversampling·factor·used·for·the·virtual·resampling·algorithm.·If··negative,·the·value·5·is·used·for·S/N·<=200,·and·the·value·10·is·used··if·the·estimated·S/N·is·>·200·(int;·default:·-1)·[default=-1]. | ||
| 109 | ..·py:attribute::·uves_cal_tflat.param.reduce.extract.best | ||
| 110 | ····(optimal·extraction·only)·If·false·(fastest),·the·spectrum·is··extracted·only·once.·If·true·(best),·the·spectrum·is·extracted·twice,··the·second·time·using·improved·variance·estimates·based·on·the·first··iteration.·Better·variance·estimates·slightly·improve·the·obtained··signal·to·noise·but·at·the·cost·of·increased·execution·time·(bool;··default:·True)·[default=True]. | ||
| 97 | ..·py:attribute::·uves_cal_tflat.param.reduce.rebin.wavestep | 111 | ..·py:attribute::·uves_cal_tflat.param.reduce.rebin.wavestep |
| 98 | ····The·bin·size·(in·w.l.u.)·in·wavelength·space.·If·negative,·a·step·size··of·2/3·*·(·average·pixel·size·)·is·used.·(float;·default:·-1.0)·[default=-1.0]. | 112 | ····The·bin·size·(in·w.l.u.)·in·wavelength·space.·If·negative,·a·step·size··of·2/3·*·(·average·pixel·size·)·is·used.·(float;·default:·-1.0)·[default=-1.0]. |
| 99 | ..·py:attribute::·uves_cal_tflat.param.reduce.rebin.scale | 113 | ..·py:attribute::·uves_cal_tflat.param.reduce.rebin.scale |
| 100 | ····Whether·or·not·to·multiply·by·the·factor·dx/dlambda·(pixels·per··wavelength)·during·the·rebinning.·This·option·is·disabled·as·default··in·concordance·with·the·method·used·in·the·MIDAS·pipeline.·This·option··should·be·set·to·true·to·convert·the·observed·flux·(in·pixel-space)·to··a·flux·per·wavelength·(in·wavelength-space).·(bool;·default:·False)·[default=False]. | 114 | ····Whether·or·not·to·multiply·by·the·factor·dx/dlambda·(pixels·per··wavelength)·during·the·rebinning.·This·option·is·disabled·as·default··in·concordance·with·the·method·used·in·the·MIDAS·pipeline.·This·option··should·be·set·to·true·to·convert·the·observed·flux·(in·pixel-space)·to··a·flux·per·wavelength·(in·wavelength-space).·(bool;·default:·False)·[default=False]. |
| 101 | ..·py:attribute::·uves_cal_tflat.param.reduce.backsub.mmethod | 115 | ..·py:attribute::·uves_cal_tflat.param.reduce.backsub.mmethod |
| Offset 116, 35 lines modified | Offset 137, 14 lines modified | ||
| 116 | ····Degree·of·interpolating·splines.·Currently·only·degree·=·1·is··supported·(int;·default:·1)·[default=1]. | 137 | ····Degree·of·interpolating·splines.·Currently·only·degree·=·1·is··supported·(int;·default:·1)·[default=1]. |
| 117 | ..·py:attribute::·uves_cal_tflat.param.reduce.backsub.smoothx | 138 | ..·py:attribute::·uves_cal_tflat.param.reduce.backsub.smoothx |
| 118 | ····If·spline·interpolation·is·used·to·measure·the·background,·the··x-radius·of·the·post-smoothing·window·is·(smoothx·*·image_width).··Here,·'image_width'·is·the·image·width·after·binning.·If·negative,·the··default·values·are·used:·(25.0/4096)·for·blue·flat-field·frames,··(50.0/4096)·for·red·flat-field·frames,·(300.0/4096)·for·blue·science··frames·and·(300.0/4096)·for·red·science·frames.·(float;·default:·-1.0)·[default=-1.0]. | 139 | ····If·spline·interpolation·is·used·to·measure·the·background,·the··x-radius·of·the·post-smoothing·window·is·(smoothx·*·image_width).··Here,·'image_width'·is·the·image·width·after·binning.·If·negative,·the··default·values·are·used:·(25.0/4096)·for·blue·flat-field·frames,··(50.0/4096)·for·red·flat-field·frames,·(300.0/4096)·for·blue·science··frames·and·(300.0/4096)·for·red·science·frames.·(float;·default:·-1.0)·[default=-1.0]. |
| 119 | ..·py:attribute::·uves_cal_tflat.param.reduce.backsub.smoothy | 140 | ..·py:attribute::·uves_cal_tflat.param.reduce.backsub.smoothy |
| 120 | ····If·spline·interpolation·is·used·to·measure·the·background,·the··y-radius·of·the·post-smoothing·window·is·(smoothy·*·image_height).··Here,·'image_height'·is·the·image·height·after·binning.·If·negative,··the·default·values·are·used:·(100.0/2048)·for·blue·flat-field·frames,··(300.0/2048)·for·red·flat-field·frames,·(200.0/2048)·for·blue·science··frames·and·(500.0/2048)·for·red·science·frames.·(float;·default:·-1.0)·[default=-1.0]. | 141 | ····If·spline·interpolation·is·used·to·measure·the·background,·the··y-radius·of·the·post-smoothing·window·is·(smoothy·*·image_height).··Here,·'image_height'·is·the·image·height·after·binning.·If·negative,··the·default·values·are·used:·(100.0/2048)·for·blue·flat-field·frames,··(300.0/2048)·for·red·flat-field·frames,·(200.0/2048)·for·blue·science··frames·and·(500.0/2048)·for·red·science·frames.·(float;·default:·-1.0)·[default=-1.0]. |
| 121 | ..·py:attribute::·uves_cal_tflat.param.reduce.extract.method | ||
| 122 | ····Extraction·method.·(2d/optimal·not·supported·by·uves_cal_wavecal,··weighted·supported·only·by·uves_cal_wavecal,·2d·not·supported·by··uves_cal_response)·(str;·default:·'average')·[default="average"]. | ||
| 123 | ..·py:attribute::·uves_cal_tflat.param.reduce.extract.kappa | ||
| 124 | ····In·optimal·extraction·mode,·this·is·the·threshold·for·bad·(i.e.··hot/cold)·pixel·rejection.·If·a·pixel·deviates·more·than·kappa*sigma··(where·sigma·is·the·uncertainty·of·the·pixel·flux)·from·the·inferred··spatial·profile,·its·weight·is·set·to·zero.·Range:·[-1,100].·If·this··parameter·is·negative,·no·rejection·is·performed.·(float;·default:··10.0)·[default=10.0]. | ||
| 125 | ..·py:attribute::·uves_cal_tflat.param.reduce.extract.chunk | ||
| 126 | ····In·optimal·extraction·mode,·the·chunk·size·(in·pixels)·used·for··fitting·the·analytical·profile·(a·fit·of·the·analytical·profile·to··single·bins·would·suffer·from·low·statistics).·(int;·default:·32)·[default=32]. | ||
| 127 | ..·py:attribute::·uves_cal_tflat.param.reduce.extract.profile | ||
| 128 | ····In·optimal·extraction·mode,·the·kind·of·profile·to·use.·'gauss'·gives··a·Gaussian·profile,·'moffat'·gives·a·Moffat·profile·with·beta=4·and·a··possible·linear·sky·contribution.·'virtual'·uses·a·virtual·resampling··algorithm·(i.e.·measures·and·uses·the·actual·object·profile).··'constant'·assumes·a·constant·spatial·profile·and·allows·optimal··extraction·of·wavelength·calibration·frames.·'auto'·will·automatically··select·the·best·method·based·on·the·estimated·S/N·of·the·object.·For··low·S/N,·'moffat'·or·'gauss'·are·recommended·(for·robustness).·For··high·S/N,·'virtual'·is·recommended·(for·accuracy).·In·the·case·of··virtual·resampling,·a·precise·determination·of·the·order·positions·is··required;·therefore·the·order-definition·is·repeated·using·the··(assumed·non-low·S/N)·science·frame·(str;·default:·'auto')·[default="auto"]. | ||
| 129 | ..·py:attribute::·uves_cal_tflat.param.reduce.extract.skymethod | ||
| 130 | ····In·optimal·extraction·mode,·the·sky·subtraction·method·to·use.··'median'·estimates·the·sky·as·the·median·of·pixels·along·the·slit··(ignoring·pixels·close·to·the·object),·whereas·'optimal'·does·a·chi··square·minimization·along·the·slit·to·obtain·the·best·combined·object··and·sky·levels.·The·optimal·method·gives·the·most·accurate·sky··determination·but·is·also·a·bit·slower·than·the·median·method·(str;··default:·'optimal')·[default="optimal"]. | ||
| 131 | ..·py:attribute::·uves_cal_tflat.param.reduce.extract.oversample | ||
| 132 | ····The·oversampling·factor·used·for·the·virtual·resampling·algorithm.·If··negative,·the·value·5·is·used·for·S/N·<=200,·and·the·value·10·is·used··if·the·estimated·S/N·is·>·200·(int;·default:·-1)·[default=-1]. | ||
| 133 | ..·py:attribute::·uves_cal_tflat.param.reduce.extract.best | ||
| 134 | ····(optimal·extraction·only)·If·false·(fastest),·the·spectrum·is··extracted·only·once.·If·true·(best),·the·spectrum·is·extracted·twice,··the·second·time·using·improved·variance·estimates·based·on·the·first··iteration.·Better·variance·estimates·slightly·improve·the·obtained··signal·to·noise·but·at·the·cost·of·increased·execution·time·(bool;··default:·True)·[default=True]. | ||
| 135 | The·following·code·snippet·shows·the·default·settings·for·the·available· | 142 | The·following·code·snippet·shows·the·default·settings·for·the·available· |
| 136 | parameters. | 143 | parameters. |
| 137 | :: | 144 | :: |
| Offset 167, 29 lines modified | Offset 167, 29 lines modified | ||
| 167 | ···uves_cal_tflat.param.reduce.objoffset·=·0.0 | 167 | ···uves_cal_tflat.param.reduce.objoffset·=·0.0 |
| 168 | ···uves_cal_tflat.param.reduce.objslit·=·-1.0 | 168 | ···uves_cal_tflat.param.reduce.objslit·=·-1.0 |
| 169 | ···uves_cal_tflat.param.reduce.tiltcorr·=·True | 169 | ···uves_cal_tflat.param.reduce.tiltcorr·=·True |
| 170 | ···uves_cal_tflat.param.reduce.ffmethod·=·"extract" | 170 | ···uves_cal_tflat.param.reduce.ffmethod·=·"extract" |
| 171 | ···uves_cal_tflat.param.reduce.merge·=·"optimal" | 171 | ···uves_cal_tflat.param.reduce.merge·=·"optimal" |
| 172 | ···uves_cal_tflat.param.reduce.merge_delt1·=·0.0 | 172 | ···uves_cal_tflat.param.reduce.merge_delt1·=·0.0 |
| 173 | ···uves_cal_tflat.param.reduce.merge_delt2·=·0.0 | 173 | ···uves_cal_tflat.param.reduce.merge_delt2·=·0.0 |
| 174 | ···uves_cal_tflat.param.reduce.extract.method·=·"average" | ||
| 175 | ···uves_cal_tflat.param.reduce.extract.kappa·=·10.0 | ||
| 176 | ···uves_cal_tflat.param.reduce.extract.chunk·=·32 | ||
| 177 | ···uves_cal_tflat.param.reduce.extract.profile·=·"auto" | ||
| 178 | ···uves_cal_tflat.param.reduce.extract.skymethod·=·"optimal" | ||
| 179 | ···uves_cal_tflat.param.reduce.extract.oversample·=·-1 | ||
| 180 | ···uves_cal_tflat.param.reduce.extract.best·=·True | ||
| 174 | ···uves_cal_tflat.param.reduce.rebin.wavestep·=·-1.0 | 181 | ···uves_cal_tflat.param.reduce.rebin.wavestep·=·-1.0 |
| 175 | ···uves_cal_tflat.param.reduce.rebin.scale·=·False | 182 | ···uves_cal_tflat.param.reduce.rebin.scale·=·False |
| 176 | ···uves_cal_tflat.param.reduce.backsub.mmethod·=·"median" | 183 | ···uves_cal_tflat.param.reduce.backsub.mmethod·=·"median" |
| 177 | ···uves_cal_tflat.param.reduce.backsub.npoints·=·82 | 184 | ···uves_cal_tflat.param.reduce.backsub.npoints·=·82 |
| 178 | ···uves_cal_tflat.param.reduce.backsub.radiusy·=·2 | 185 | ···uves_cal_tflat.param.reduce.backsub.radiusy·=·2 |
| 179 | ···uves_cal_tflat.param.reduce.backsub.sdegree·=·1 | 186 | ···uves_cal_tflat.param.reduce.backsub.sdegree·=·1 |
| 180 | ···uves_cal_tflat.param.reduce.backsub.smoothx·=·-1.0 | 187 | ···uves_cal_tflat.param.reduce.backsub.smoothx·=·-1.0 |
| 181 | ···uves_cal_tflat.param.reduce.backsub.smoothy·=·-1.0 | 188 | ···uves_cal_tflat.param.reduce.backsub.smoothy·=·-1.0 |
| 182 | ···uves_cal_tflat.param.reduce.extract.method·=·"average" | ||
| 183 | ···uves_cal_tflat.param.reduce.extract.kappa·=·10.0 | ||
| 184 | ···uves_cal_tflat.param.reduce.extract.chunk·=·32 | ||
| 185 | ···uves_cal_tflat.param.reduce.extract.profile·=·"auto" | ||
| 186 | ···uves_cal_tflat.param.reduce.extract.skymethod·=·"optimal" | ||
| 187 | ···uves_cal_tflat.param.reduce.extract.oversample·=·-1 | ||
| 188 | ···uves_cal_tflat.param.reduce.extract.best·=·True | ||
| 189 | You·may·also·set·or·overwrite·some·or·all·parameters·by·the·recipe· | 189 | You·may·also·set·or·overwrite·some·or·all·parameters·by·the·recipe· |
| 190 | parameter·`param`,·as·shown·in·the·following·example: | 190 | parameter·`param`,·as·shown·in·the·following·example: |
| 191 | :: | 191 | :: |
| Offset 144, 20 lines modified | Offset 144, 14 lines modified | ||
| 144 | ····Degrees·of·the·global·2d·dispersion·polynomial.·If·a·negative·number··is·specified,·the·polynomial·degrees·are·automatically·selected·by··starting·from·(1,·1)·and·inreasing·the·degrees·as·long·as·the·RMS··residual·decreases·significantly·(int;·default:·4)·[default=4]. | 144 | ····Degrees·of·the·global·2d·dispersion·polynomial.·If·a·negative·number··is·specified,·the·polynomial·degrees·are·automatically·selected·by··starting·from·(1,·1)·and·inreasing·the·degrees·as·long·as·the·RMS··residual·decreases·significantly·(int;·default:·4)·[default=4]. |
| 145 | ..·py:attribute::·uves_cal_wavecal.param.tolerance | 145 | ..·py:attribute::·uves_cal_wavecal.param.tolerance |
| 146 | ····Tolerance·of·fit.·If·positive,·the·tolerance·is·in·pixel·units.·If··negative,·abs(tolerance)·is·in·wavelength·units.·Lines·with·residuals··worse·than·the·tolerance·are·excluded·from·the·final·fit.·Unlike·in··previous·versions,·this·parameter·is·not·corrected·for·CCD·binning.··This·rejection·based·on·the·absolute·residual·in·pixel·can·be··effectively·disabled·by·setting·the·tolerance·to·a·very·large·number··(e.g.·9999).·In·that·case·outliers·will·be·rejected·using·only·kappa··sigma·clipping.·(float;·default:·0.6)·[default=0.6]. | 146 | ····Tolerance·of·fit.·If·positive,·the·tolerance·is·in·pixel·units.·If··negative,·abs(tolerance)·is·in·wavelength·units.·Lines·with·residuals··worse·than·the·tolerance·are·excluded·from·the·final·fit.·Unlike·in··previous·versions,·this·parameter·is·not·corrected·for·CCD·binning.··This·rejection·based·on·the·absolute·residual·in·pixel·can·be··effectively·disabled·by·setting·the·tolerance·to·a·very·large·number··(e.g.·9999).·In·that·case·outliers·will·be·rejected·using·only·kappa··sigma·clipping.·(float;·default:·0.6)·[default=0.6]. |
| 147 | ..·py:attribute::·uves_cal_wavecal.param.kappa | 147 | ..·py:attribute::·uves_cal_wavecal.param.kappa |
| 148 | ····Lines·with·residuals·more·then·kappa·stdev·are·rejected·from·the·final··fit·(float;·default:·4.0)·[default=4.0]. | 148 | ····Lines·with·residuals·more·then·kappa·stdev·are·rejected·from·the·final··fit·(float;·default:·4.0)·[default=4.0]. |
| 149 | ..·py:attribute::·uves_cal_wavecal.param.rebin.wavestep | ||
| 150 | ····The·bin·size·(in·w.l.u.)·in·wavelength·space.·If·negative,·a·step·size··of·2/3·*·(·average·pixel·size·)·is·used.·(float;·default:·-1.0)·[default=-1.0]. | ||
| 151 | ..·py:attribute::·uves_cal_wavecal.param.rebin.scale | ||
| 152 | ····Whether·or·not·to·multiply·by·the·factor·dx/dlambda·(pixels·per··wavelength)·during·the·rebinning.·This·option·is·disabled·as·default··in·concordance·with·the·method·used·in·the·MIDAS·pipeline.·This·option··should·be·set·to·true·to·convert·the·observed·flux·(in·pixel-space)·to··a·flux·per·wavelength·(in·wavelength-space).·(bool;·default:·False)·[default=False]. | ||
| 153 | ..·py:attribute::·uves_cal_wavecal.param.extract.method | 149 | ..·py:attribute::·uves_cal_wavecal.param.extract.method |
| 154 | ····Extraction·method.·(2d/optimal·not·supported·by·uves_cal_wavecal,··weighted·supported·only·by·uves_cal_wavecal,·2d·not·supported·by··uves_cal_response)·(str;·default:·'average')·[default="average"]. | 150 | ····Extraction·method.·(2d/optimal·not·supported·by·uves_cal_wavecal,··weighted·supported·only·by·uves_cal_wavecal,·2d·not·supported·by··uves_cal_response)·(str;·default:·'average')·[default="average"]. |
| 155 | ..·py:attribute::·uves_cal_wavecal.param.extract.kappa | 151 | ..·py:attribute::·uves_cal_wavecal.param.extract.kappa |
| 156 | ····In·optimal·extraction·mode,·this·is·the·threshold·for·bad·(i.e.··hot/cold)·pixel·rejection.·If·a·pixel·deviates·more·than·kappa*sigma··(where·sigma·is·the·uncertainty·of·the·pixel·flux)·from·the·inferred··spatial·profile,·its·weight·is·set·to·zero.·Range:·[-1,100].·If·this··parameter·is·negative,·no·rejection·is·performed.·(float;·default:··10.0)·[default=10.0]. | 152 | ····In·optimal·extraction·mode,·this·is·the·threshold·for·bad·(i.e.··hot/cold)·pixel·rejection.·If·a·pixel·deviates·more·than·kappa*sigma··(where·sigma·is·the·uncertainty·of·the·pixel·flux)·from·the·inferred··spatial·profile,·its·weight·is·set·to·zero.·Range:·[-1,100].·If·this··parameter·is·negative,·no·rejection·is·performed.·(float;·default:··10.0)·[default=10.0]. |
| 157 | ..·py:attribute::·uves_cal_wavecal.param.extract.chunk | 153 | ..·py:attribute::·uves_cal_wavecal.param.extract.chunk |
| Offset 171, 14 lines modified | Offset 165, 20 lines modified | ||
| 171 | ····In·optimal·extraction·mode,·the·sky·subtraction·method·to·use.··'median'·estimates·the·sky·as·the·median·of·pixels·along·the·slit··(ignoring·pixels·close·to·the·object),·whereas·'optimal'·does·a·chi··square·minimization·along·the·slit·to·obtain·the·best·combined·object··and·sky·levels.·The·optimal·method·gives·the·most·accurate·sky··determination·but·is·also·a·bit·slower·than·the·median·method·(str;··default:·'optimal')·[default="optimal"]. | 165 | ····In·optimal·extraction·mode,·the·sky·subtraction·method·to·use.··'median'·estimates·the·sky·as·the·median·of·pixels·along·the·slit··(ignoring·pixels·close·to·the·object),·whereas·'optimal'·does·a·chi··square·minimization·along·the·slit·to·obtain·the·best·combined·object··and·sky·levels.·The·optimal·method·gives·the·most·accurate·sky··determination·but·is·also·a·bit·slower·than·the·median·method·(str;··default:·'optimal')·[default="optimal"]. |
| 172 | ..·py:attribute::·uves_cal_wavecal.param.extract.oversample | 166 | ..·py:attribute::·uves_cal_wavecal.param.extract.oversample |
| 173 | ····The·oversampling·factor·used·for·the·virtual·resampling·algorithm.·If··negative,·the·value·5·is·used·for·S/N·<=200,·and·the·value·10·is·used··if·the·estimated·S/N·is·>·200·(int;·default:·-1)·[default=-1]. | 167 | ····The·oversampling·factor·used·for·the·virtual·resampling·algorithm.·If··negative,·the·value·5·is·used·for·S/N·<=200,·and·the·value·10·is·used··if·the·estimated·S/N·is·>·200·(int;·default:·-1)·[default=-1]. |
| 174 | ..·py:attribute::·uves_cal_wavecal.param.extract.best | 168 | ..·py:attribute::·uves_cal_wavecal.param.extract.best |
| 175 | ····(optimal·extraction·only)·If·false·(fastest),·the·spectrum·is··extracted·only·once.·If·true·(best),·the·spectrum·is·extracted·twice,··the·second·time·using·improved·variance·estimates·based·on·the·first··iteration.·Better·variance·estimates·slightly·improve·the·obtained··signal·to·noise·but·at·the·cost·of·increased·execution·time·(bool;··default:·True)·[default=True]. | 169 | ····(optimal·extraction·only)·If·false·(fastest),·the·spectrum·is··extracted·only·once.·If·true·(best),·the·spectrum·is·extracted·twice,··the·second·time·using·improved·variance·estimates·based·on·the·first··iteration.·Better·variance·estimates·slightly·improve·the·obtained··signal·to·noise·but·at·the·cost·of·increased·execution·time·(bool;··default:·True)·[default=True]. |
| 170 | ..·py:attribute::·uves_cal_wavecal.param.rebin.wavestep | ||
| 171 | ····The·bin·size·(in·w.l.u.)·in·wavelength·space.·If·negative,·a·step·size··of·2/3·*·(·average·pixel·size·)·is·used.·(float;·default:·-1.0)·[default=-1.0]. | ||
| 172 | ..·py:attribute::·uves_cal_wavecal.param.rebin.scale | ||
| 173 | ····Whether·or·not·to·multiply·by·the·factor·dx/dlambda·(pixels·per··wavelength)·during·the·rebinning.·This·option·is·disabled·as·default··in·concordance·with·the·method·used·in·the·MIDAS·pipeline.·This·option··should·be·set·to·true·to·convert·the·observed·flux·(in·pixel-space)·to··a·flux·per·wavelength·(in·wavelength-space).·(bool;·default:·False)·[default=False]. | ||
| 176 | The·following·code·snippet·shows·the·default·settings·for·the·available· | 174 | The·following·code·snippet·shows·the·default·settings·for·the·available· |
| 177 | parameters. | 175 | parameters. |
| 178 | :: | 176 | :: |
| Offset 198, 23 lines modified | Offset 198, 23 lines modified | ||
| 198 | ···uves_cal_wavecal.param.shiftstep·=·0.1 | 198 | ···uves_cal_wavecal.param.shiftstep·=·0.1 |
| 199 | ···uves_cal_wavecal.param.shifttoler·=·0.05 | 199 | ···uves_cal_wavecal.param.shifttoler·=·0.05 |
| 200 | ···uves_cal_wavecal.param.alpha·=·0.1 | 200 | ···uves_cal_wavecal.param.alpha·=·0.1 |
| 201 | ···uves_cal_wavecal.param.maxerror·=·20.0 | 201 | ···uves_cal_wavecal.param.maxerror·=·20.0 |
| 202 | ···uves_cal_wavecal.param.degree·=·4 | 202 | ···uves_cal_wavecal.param.degree·=·4 |
| 203 | ···uves_cal_wavecal.param.tolerance·=·0.6 | 203 | ···uves_cal_wavecal.param.tolerance·=·0.6 |
| 204 | ···uves_cal_wavecal.param.kappa·=·4.0 | 204 | ···uves_cal_wavecal.param.kappa·=·4.0 |
| 205 | ···uves_cal_wavecal.param.rebin.wavestep·=·-1.0 | ||
| 206 | ···uves_cal_wavecal.param.rebin.scale·=·False | ||
| 207 | ···uves_cal_wavecal.param.extract.method·=·"average" | 205 | ···uves_cal_wavecal.param.extract.method·=·"average" |
| 208 | ···uves_cal_wavecal.param.extract.kappa·=·10.0 | 206 | ···uves_cal_wavecal.param.extract.kappa·=·10.0 |
| 209 | ···uves_cal_wavecal.param.extract.chunk·=·32 | 207 | ···uves_cal_wavecal.param.extract.chunk·=·32 |
| 210 | ···uves_cal_wavecal.param.extract.profile·=·"auto" | 208 | ···uves_cal_wavecal.param.extract.profile·=·"auto" |
| 211 | ···uves_cal_wavecal.param.extract.skymethod·=·"optimal" | 209 | ···uves_cal_wavecal.param.extract.skymethod·=·"optimal" |
| 212 | ···uves_cal_wavecal.param.extract.oversample·=·-1 | 210 | ···uves_cal_wavecal.param.extract.oversample·=·-1 |
| 213 | ···uves_cal_wavecal.param.extract.best·=·True | 211 | ···uves_cal_wavecal.param.extract.best·=·True |
| 212 | ···uves_cal_wavecal.param.rebin.wavestep·=·-1.0 | ||
| 213 | ···uves_cal_wavecal.param.rebin.scale·=·False | ||
| 214 | You·may·also·set·or·overwrite·some·or·all·parameters·by·the·recipe· | 214 | You·may·also·set·or·overwrite·some·or·all·parameters·by·the·recipe· |
| 215 | parameter·`param`,·as·shown·in·the·following·example: | 215 | parameter·`param`,·as·shown·in·the·following·example: |
| 216 | :: | 216 | :: |
| Offset 62, 14 lines modified | Offset 62, 29 lines modified | ||
| 62 | ····Whether·or·not·to·save·intermediate·results·to·local·directory·(bool;··default:·False)·[default=False]. | 62 | ····Whether·or·not·to·save·intermediate·results·to·local·directory·(bool;··default:·False)·[default=False]. |
| 63 | ..·py:attribute::·uves_obs_redchain.param.plotter | 63 | ..·py:attribute::·uves_obs_redchain.param.plotter |
| 64 | ····Any·plots·produced·by·the·recipe·are·redirected·to·the·command··specified·by·this·parameter.·The·plotting·command·must·contain·the··substring·'gnuplot'·and·must·be·able·to·parse·gnuplot·syntax·on·its··standard·input.·Valid·examples·of·such·a·command·may·include·'gnuplot··-persist'·and·'cat·>·mygnuplot$$.gp'.·A·finer·control·of·the·plotting··options·can·be·obtained·by·writing·an·executable·script,·e.g.··my_gnuplot.pl,·that·executes·gnuplot·after·setting·the·desired·gnuplot··options·(e.g.·set·terminal·pslatex·color).·To·turn·off·plotting,·set··this·parameter·to·'no'·(str;·default:·'no')·[default="no"]. | 64 | ····Any·plots·produced·by·the·recipe·are·redirected·to·the·command··specified·by·this·parameter.·The·plotting·command·must·contain·the··substring·'gnuplot'·and·must·be·able·to·parse·gnuplot·syntax·on·its··standard·input.·Valid·examples·of·such·a·command·may·include·'gnuplot··-persist'·and·'cat·>·mygnuplot$$.gp'.·A·finer·control·of·the·plotting··options·can·be·obtained·by·writing·an·executable·script,·e.g.··my_gnuplot.pl,·that·executes·gnuplot·after·setting·the·desired·gnuplot··options·(e.g.·set·terminal·pslatex·color).·To·turn·off·plotting,·set··this·parameter·to·'no'·(str;·default:·'no')·[default="no"]. |
| 65 | ..·py:attribute::·uves_obs_redchain.param.process_chip | 65 | ..·py:attribute::·uves_obs_redchain.param.process_chip |
| 66 | ····For·RED·arm·data·process·the·redl,·redu,·or·both·chip(s)·(str;··default:·'both')·[default="both"]. | 66 | ····For·RED·arm·data·process·the·redl,·redu,·or·both·chip(s)·(str;··default:·'both')·[default="both"]. |
| 67 | ..·py:attribute::·uves_obs_redchain.param.uves_cal_mbias.clean_traps | ||
| 68 | ····Clean·detector·traps.·If·TRUE·detector·traps·are·interpolated.The·bad··pixels·are·replaced·by·the·average·of·thenearest·good·pixels·in·the··same·column,·or·simply·marked·as·bad.·The·positions·of·bad·pixels·are··hard-coded·(as·function·of·UVES·chip).·(bool;·default:·False)·[default=False]. | ||
| 69 | ..·py:attribute::·uves_obs_redchain.param.uves_cal_mbias.stack_method | ||
| 70 | ····Method·used·to·build·master·frame··(str;·default:·'median')·[default="median"]. | ||
| 71 | ..·py:attribute::·uves_obs_redchain.param.uves_cal_mbias.klow | ||
| 72 | ····Kappa·used·to·clip·low·level·values,·when·method·is·set·to·'mean'··(float;·default:·5.0)·[default=5.0]. | ||
| 73 | ..·py:attribute::·uves_obs_redchain.param.uves_cal_mbias.khigh | ||
| 74 | ····Kappa·used·to·clip·high·level·values,·when·method·is·set·to·'mean'··(float;·default:·5.0)·[default=5.0]. | ||
| 75 | ..·py:attribute::·uves_obs_redchain.param.uves_cal_mbias.niter | ||
| 76 | ····Number·of·kappa·sigma·iterations,·when·method·is·set·to·'mean'··(int;··default:·5)·[default=5]. | ||
| 67 | ..·py:attribute::·uves_obs_redchain.param.uves_cal_wavecal.nwindows | 77 | ..·py:attribute::·uves_obs_redchain.param.uves_cal_wavecal.nwindows |
| 68 | ····Number·of·extraction·windows·per·trace.·The·windows·will·be·aligned··(i.e.·no·overlap·and·no·spacing·between·adjacent·windows).·Unless·an··offset·is·specified,·the·middle·window(s)·is·centered·on·the·trace··(int;·default:·3)·[default=3]. | 78 | ····Number·of·extraction·windows·per·trace.·The·windows·will·be·aligned··(i.e.·no·overlap·and·no·spacing·between·adjacent·windows).·Unless·an··offset·is·specified,·the·middle·window(s)·is·centered·on·the·trace··(int;·default:·3)·[default=3]. |
| 69 | ..·py:attribute::·uves_obs_redchain.param.uves_cal_wavecal.length | 79 | ..·py:attribute::·uves_obs_redchain.param.uves_cal_wavecal.length |
| 70 | ····Length·(in·pixels)·of·each·extraction·window.·This·parameter·is·also··equal·to·the·seperation·of·adjacent·window·centers,·causing·the··extraction·windows·to·always·be·aligned.·The·parameter·is··automatically·adjusted·according·to·the·binning·of·the·input·raw··frame.·If·negative,·the·extraction·window·length·is·determined··automatically·to·cover·the·full·slit·(float;·default:·-1.0)·[default=-1.0]. | 80 | ····Length·(in·pixels)·of·each·extraction·window.·This·parameter·is·also··equal·to·the·seperation·of·adjacent·window·centers,·causing·the··extraction·windows·to·always·be·aligned.·The·parameter·is··automatically·adjusted·according·to·the·binning·of·the·input·raw··frame.·If·negative,·the·extraction·window·length·is·determined··automatically·to·cover·the·full·slit·(float;·default:·-1.0)·[default=-1.0]. |
| 71 | ..·py:attribute::·uves_obs_redchain.param.uves_cal_wavecal.offset | 81 | ..·py:attribute::·uves_obs_redchain.param.uves_cal_wavecal.offset |
| Offset 131, 14 lines modified | Offset 146, 35 lines modified | ||
| 131 | ····(optimal·extraction·only)·If·false·(fastest),·the·spectrum·is··extracted·only·once.·If·true·(best),·the·spectrum·is·extracted·twice,··the·second·time·using·improved·variance·estimates·based·on·the·first··iteration.·Better·variance·estimates·slightly·improve·the·obtained··signal·to·noise·but·at·the·cost·of·increased·execution·time·(bool;··default:·True)·[default=True]. | 146 | ····(optimal·extraction·only)·If·false·(fastest),·the·spectrum·is··extracted·only·once.·If·true·(best),·the·spectrum·is·extracted·twice,··the·second·time·using·improved·variance·estimates·based·on·the·first··iteration.·Better·variance·estimates·slightly·improve·the·obtained··signal·to·noise·but·at·the·cost·of·increased·execution·time·(bool;··default:·True)·[default=True]. |
| 132 | ..·py:attribute::·uves_obs_redchain.param.uves_cal_wavecal.rebin.wavestep | 147 | ..·py:attribute::·uves_obs_redchain.param.uves_cal_wavecal.rebin.wavestep |
| 133 | ····The·bin·size·(in·w.l.u.)·in·wavelength·space.·If·negative,·a·step·size··of·2/3·*·(·average·pixel·size·)·is·used.·(float;·default:·-1.0)·[default=-1.0]. | 148 | ····The·bin·size·(in·w.l.u.)·in·wavelength·space.·If·negative,·a·step·size··of·2/3·*·(·average·pixel·size·)·is·used.·(float;·default:·-1.0)·[default=-1.0]. |
| 134 | ..·py:attribute::·uves_obs_redchain.param.uves_cal_wavecal.rebin.scale | 149 | ..·py:attribute::·uves_obs_redchain.param.uves_cal_wavecal.rebin.scale |
| 135 | ····Whether·or·not·to·multiply·by·the·factor·dx/dlambda·(pixels·per··wavelength)·during·the·rebinning.·This·option·is·disabled·as·default··in·concordance·with·the·method·used·in·the·MIDAS·pipeline.·This·option··should·be·set·to·true·to·convert·the·observed·flux·(in·pixel-space)·to··a·flux·per·wavelength·(in·wavelength-space).·(bool;·default:·False)·[default=False]. | 150 | ····Whether·or·not·to·multiply·by·the·factor·dx/dlambda·(pixels·per··wavelength)·during·the·rebinning.·This·option·is·disabled·as·default··in·concordance·with·the·method·used·in·the·MIDAS·pipeline.·This·option··should·be·set·to·true·to·convert·the·observed·flux·(in·pixel-space)·to··a·flux·per·wavelength·(in·wavelength-space).·(bool;·default:·False)·[default=False]. |
| 151 | ..·py:attribute::·uves_obs_redchain.param.uves_cal_mflat.norm_method | ||
| 152 | ····Method·used·to·build·master·frame··(str;·default:·'explevel')·[default="explevel"]. | ||
| 153 | ..·py:attribute::·uves_obs_redchain.param.uves_cal_mflat.backsub.mmethod | ||
| 154 | ····Background·measuring·method.·If·equal·to·'median'·the·background·is··sampled·using·the·median·of·a·subwindow.·If·'minimum',·the·subwindow··minimum·value·is·used.·If·'no',·no·background·subtraction·is·done.··(str;·default:·'median')·[default="median"]. | ||
| 155 | ..·py:attribute::·uves_obs_redchain.param.uves_cal_mflat.backsub.npoints | ||
| 156 | ····This·is·the·number·of·columns·in·interorder·space·used·to·sample·the··background.·(int;·default:·82)·[default=82]. | ||
| 157 | ..·py:attribute::·uves_obs_redchain.param.uves_cal_mflat.backsub.radiusy | ||
| 158 | ····The·height·(in·pixels)·of·the·background·sampling·window·is·(2*radiusy··+·1).·This·parameter·is·not·corrected·for·binning.·(int;·default:·2)·[default=2]. | ||
| 159 | ..·py:attribute::·uves_obs_redchain.param.uves_cal_mflat.backsub.sdegree | ||
| 160 | ····Degree·of·interpolating·splines.·Currently·only·degree·=·1·is··supported·(int;·default:·1)·[default=1]. | ||
| 161 | ..·py:attribute::·uves_obs_redchain.param.uves_cal_mflat.backsub.smoothx | ||
| 162 | ····If·spline·interpolation·is·used·to·measure·the·background,·the··x-radius·of·the·post-smoothing·window·is·(smoothx·*·image_width).··Here,·'image_width'·is·the·image·width·after·binning.·If·negative,·the··default·values·are·used:·(25.0/4096)·for·blue·flat-field·frames,··(50.0/4096)·for·red·flat-field·frames,·(300.0/4096)·for·blue·science··frames·and·(300.0/4096)·for·red·science·frames.·(float;·default:·-1.0)·[default=-1.0]. | ||
| 163 | ..·py:attribute::·uves_obs_redchain.param.uves_cal_mflat.backsub.smoothy | ||
| 164 | ····If·spline·interpolation·is·used·to·measure·the·background,·the··y-radius·of·the·post-smoothing·window·is·(smoothy·*·image_height).··Here,·'image_height'·is·the·image·height·after·binning.·If·negative,··the·default·values·are·used:·(100.0/2048)·for·blue·flat-field·frames,··(300.0/2048)·for·red·flat-field·frames,·(200.0/2048)·for·blue·science··frames·and·(500.0/2048)·for·red·science·frames.·(float;·default:·-1.0)·[default=-1.0]. | ||
| 136 | ..·py:attribute::·uves_obs_redchain.param.uves_cal_predict.mbox_x | 165 | ..·py:attribute::·uves_obs_redchain.param.uves_cal_predict.mbox_x |
| 137 | ····Match·box·X·size·(int;·default:·40)·[default=40]. | 166 | ····Match·box·X·size·(int;·default:·40)·[default=40]. |
| 138 | ..·py:attribute::·uves_obs_redchain.param.uves_cal_predict.mbox_y | 167 | ..·py:attribute::·uves_obs_redchain.param.uves_cal_predict.mbox_y |
| 139 | ····Match·box·Y·size·(int;·default:·40)·[default=40]. | 168 | ····Match·box·Y·size·(int;·default:·40)·[default=40]. |
| 140 | ..·py:attribute::·uves_obs_redchain.param.uves_cal_predict.trans_x | 169 | ..·py:attribute::·uves_obs_redchain.param.uves_cal_predict.trans_x |
| Offset 167, 44 lines modified | Offset 203, 89 lines modified | ||
| 167 | ····Polynomial·Y·deg·(int;·default:·5)·[default=5]. | 203 | ····Polynomial·Y·deg·(int;·default:·5)·[default=5]. |
| 168 | ..·py:attribute::·uves_obs_redchain.param.uves_cal_predict.kappa | 204 | ..·py:attribute::·uves_obs_redchain.param.uves_cal_predict.kappa |
| 169 | ····Kappa·value·in·kappa·sigma·clipping·on·RESIDUAL·between·YFIT·and·Y··columns·(float;·default:·4.5)·[default=4.5]. | 205 | ····Kappa·value·in·kappa·sigma·clipping·on·RESIDUAL·between·YFIT·and·Y··columns·(float;·default:·4.5)·[default=4.5]. |
| 170 | ..·py:attribute::·uves_obs_redchain.param.uves_cal_predict.tol | 206 | ..·py:attribute::·uves_obs_redchain.param.uves_cal_predict.tol |
| 171 | ····Tolerance·in·kappa·sigma·clipping·on·RESIDUAL·between·YFIT·and·Y··columns·(float;·default:·2.0)·[default=2.0]. | 207 | ····Tolerance·in·kappa·sigma·clipping·on·RESIDUAL·between·YFIT·and·Y··columns·(float;·default:·2.0)·[default=2.0]. |
| 172 | ..·py:attribute::·uves_obs_redchain.param.uves_ | 208 | ..·py:attribute::·uves_obs_redchain.param.uves_obs_scired.clean_traps |
| 173 | ····Clean·detector·traps.·If·TRUE·detector·traps·are·interpolated.The·bad··pixels·are·replaced·by·the·average·of·thenearest·good·pixels·in·the··same·column,·or·simply·marked·as·bad.·The·positions·of·bad·pixels·are··hard-coded·(as·function·of·UVES·chip).·(bool;·default:·False)·[default=False]. | 209 | ····Clean·detector·traps.·If·TRUE·detector·traps·are·interpolated.The·bad··pixels·are·replaced·by·the·average·of·thenearest·good·pixels·in·the··same·column,·or·simply·marked·as·bad.·The·positions·of·bad·pixels·are··hard-coded·(as·function·of·UVES·chip).·(bool;·default:·False)·[default=False]. |
| 174 | ..·py:attribute::·uves_obs_redchain.param.uves_ | 210 | ..·py:attribute::·uves_obs_redchain.param.uves_obs_scired.reduce.slitlength |
| 175 | ····Method·used·to·build·master·frame··(str;·default:·'median')·[default="median"]. | ||
| 176 | 211 | ····Extraction·slit·length·(in·pixels).·If·negative,·the·value·inferred··from·the·raw·frame·header·is·used·(float;·default:·-1.0)·[default=-1.0]. | |
| 212 | ..·py:attribute::·uves_obs_redchain.param.uves_obs_scired.reduce.skysub | ||
| 177 | ····Kappa·used·to·clip·low·level·values,·when·method·is·set·to·'mean'··(float;·default:·5.0)·[default=5.0]. | ||
| 178 | 213 | ····Do·sky-subtraction·(only·applicable·to·linear·and·average··extractions)?·(bool;·default:·True)·[default=True]. | |
| 214 | ..·py:attribute::·uves_obs_redchain.param.uves_obs_scired.reduce.objoffset | ||
| 179 | ···· | 215 | ····Offset·(in·pixels)·of·extraction·slit·with·respect·to·center·of·order.··This·parameter·applies·to·linear/average/optimal·extraction.·For··linear/average·extraction,·if·the·related·parameter·objslit·is··negative,·the·offset·is·automatically·determined·by·measuring·the··actual·object·position.··(float;·default:·0.0)·[default=0.0]. |
| 180 | ..·py:attribute::·uves_obs_redchain.param.uves_ | 216 | ..·py:attribute::·uves_obs_redchain.param.uves_obs_scired.reduce.objslit |
| 181 | ····Number·of·kappa·sigma·iterations,·when·method·is·set·to·'mean'··(int;··default:·5)·[default=5]. | ||
| 182 | . | 217 | ····Object·window·size·(in·pixels).·This·must·be·less·than·the·total·slit··length.·If·negative,·the·default·value·(half·of·full·slit·length)·is··used.·The·upper·and·lower·sky·windows·are·defined·as·the·part·of·the··full·slit·(if·any)·outside·the·object·window.·The·center·of·the·object··window·is·determined·by·the·offset·parameter.·This·parameter·does·not··apply·to·optimal·extraction.·(float;·default:·-1.0)·[default=-1.0]. |
| 218 | ..·py:attribute::·uves_obs_redchain.param.uves_obs_scired.reduce.tiltcorr | ||
| 183 | ···· | 219 | ····If·enabled·(recommended),·the·provided·dispersion·solutions·obtained··at·different·slit·positions·are·interpolated·linearly·at·the·actually··measured·position·of·the·object/sky.·Line·tilt·correction·is·currently··not·supported·for·2d·extraction,·in·which·case·the·dispersion·solution··obtained·at·the·middle·of·the·slit·is·always·used.·(bool;·default:··True)·[default=True]. |
| 184 | ..·py:attribute::·uves_obs_redchain.param.uves_ | 220 | ..·py:attribute::·uves_obs_redchain.param.uves_obs_scired.reduce.ffmethod |
| 185 | ····Flat-fielding·method.·If·set·to·'pixel',·flat-fielding·is·done·in··pixel-pixel·space·(before·extraction);·if·set·to·'extract',·flat-··fielding·is·performed·in·pixel-order·space·(i.e.·after·extraction).·If··set·to·'no',·no·flat-field·correction·is·done | 221 | ····Flat-fielding·method.·If·set·to·'pixel',·flat-fielding·is·done·in··pixel-pixel·space·(before·extraction);·if·set·to·'extract',·flat-··fielding·is·performed·in·pixel-order·space·(i.e.·after·extraction).·If··set·to·'no',·no·flat-field·correction·is·done·(str;·default:··'extract')·[default="extract"]. |
| 186 | ..·py:attribute::·uves_obs_redchain.param.uves_ | 222 | ..·py:attribute::·uves_obs_redchain.param.uves_obs_scired.reduce.merge |
| 187 | ····Order·merging·method.·If·'optimal',·the·flux·in·the·overlapping·region··is·set·to·the·(optimally·computed,·using·the·uncertainties)·average·of··single·order·spectra.·If·'sum',·the·flux·in·the·overlapping·region·is··computed·as·the·sum·of·the·single·order·spectra.If·'noappend'·the··spectrum·is·simply·rebinned·but·not·merged.If·flat-fielding·is·done,··method·'optimal'·is·recommended,·otherwise·'sum'. | 223 | ····Order·merging·method.·If·'optimal',·the·flux·in·the·overlapping·region··is·set·to·the·(optimally·computed,·using·the·uncertainties)·average·of··single·order·spectra.·If·'sum',·the·flux·in·the·overlapping·region·is··computed·as·the·sum·of·the·single·order·spectra.·If·'noappend'·the··spectrum·is·simply·rebinned·but·not·merged.If·flat-fielding·is·done,··method·'optimal'·is·recommended,·otherwise·'sum'.·(str;·default:··'optimal')·[default="optimal"]. |
| 224 | ..·py:attribute::·uves_obs_redchain.param.uves_obs_scired.reduce.merge_delt1 | ||
| 225 | ····Order·merging·left·hand·(short·wavelength)·cut.·To·reduce·the·amount··of·order·overlapping·regions·we·allow·to·cut·short·and·long·wavelength··ranges.·This·may·reduce·the·ripple·possibly·introduced·by·the·order··merging.·Suggested·values·are:·10·(W<=390),·12·(390<W<=437,··520<W<=564),·14·(437<W<=520,·564<W)··(float;·default:·0.0)·[default=0.0]. | ||
| 226 | ..·py:attribute::·uves_obs_redchain.param.uves_obs_scired.reduce.merge_delt2 | ||
| 227 | ····Order·merging·right·hand·(long·wavelength)·cut.·To·reduce·the·amount··of·order·overlapping·regions·we·allow·to·cut·short·and·long·wavelength··ranges.·This·may·reduce·the·ripple·possibly·introduced·by·the·order··merging.·Suggested·values·is·4·(float;·default:·0.0)·[default=0.0]. | ||
| 228 | ..·py:attribute::·uves_obs_redchain.param.uves_obs_scired.reduce.backsub.mmethod | ||
| 229 | ····Background·measuring·method.·If·equal·to·'median'·the·background·is··sampled·using·the·median·of·a·subwindow.·If·'minimum',·the·subwindow··minimum·value·is·used.·If·'no',·no·background·subtraction·is·done.··(str;·default:·'median')·[default="median"]. | ||
| 230 | ..·py:attribute::·uves_obs_redchain.param.uves_obs_scired.reduce.backsub.npoints | ||
| 231 | ····This·is·the·number·of·columns·in·interorder·space·used·to·sample·the··background.·(int;·default:·82)·[default=82]. | ||
| 232 | ..·py:attribute::·uves_obs_redchain.param.uves_obs_scired.reduce.backsub.radiusy | ||
| 233 | ····The·height·(in·pixels)·of·the·background·sampling·window·is·(2*radiusy··+·1).·This·parameter·is·not·corrected·for·binning.·(int;·default:·2)·[default=2]. | ||
| 234 | ..·py:attribute::·uves_obs_redchain.param.uves_obs_scired.reduce.backsub.sdegree | ||
| 235 | ····Degree·of·interpolating·splines.·Currently·only·degree·=·1·is··supported·(int;·default:·1)·[default=1]. | ||
| 236 | ..·py:attribute::·uves_obs_redchain.param.uves_obs_scired.reduce.backsub.smoothx | ||
| 237 | ····If·spline·interpolation·is·used·to·measure·the·background,·the··x-radius·of·the·post-smoothing·window·is·(smoothx·*·image_width).··Here,·'image_width'·is·the·image·width·after·binning.·If·negative,·the··default·values·are·used:·(25.0/4096)·for·blue·flat-field·frames,··(50.0/4096)·for·red·flat-field·frames,·(300.0/4096)·for·blue·science··frames·and·(300.0/4096)·for·red·science·frames.·(float;·default:·-1.0)·[default=-1.0]. | ||
| 238 | ..·py:attribute::·uves_obs_redchain.param.uves_obs_scired.reduce.backsub.smoothy | ||
| 239 | ····If·spline·interpolation·is·used·to·measure·the·background,·the··y-radius·of·the·post-smoothing·window·is·(smoothy·*·image_height).··Here,·'image_height'·is·the·image·height·after·binning.·If·negative,··the·default·values·are·used:·(100.0/2048)·for·blue·flat-field·frames,··(300.0/2048)·for·red·flat-field·frames,·(200.0/2048)·for·blue·science··frames·and·(500.0/2048)·for·red·science·frames.·(float;·default:·-1.0)·[default=-1.0]. | ||
| 240 | ..·py:attribute::·uves_obs_redchain.param.uves_obs_scired.reduce.extract.method | ||
| 241 | ····Extraction·method.·(2d/optimal·not·supported·by·uves_cal_wavecal,··weighted·supported·only·by·uves_cal_wavecal,·2d·not·supported·by··uves_cal_response)·(str;·default:·'optimal')·[default="optimal"]. | ||
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| 114 | ····Order·merging·method.·If·'optimal',·the·flux·in·the·overlapping·region··is·set·to·the·(optimally·computed,·using·the·uncertainties)·average·of··single·order·spectra.·If·'sum',·the·flux·in·the·overlapping·region·is··computed·as·the·sum·of·the·single·order·spectra.·If·'noappend'·the··spectrum·is·simply·rebinned·but·not·merged.If·flat-fielding·is·done,··method·'optimal'·is·recommended,·otherwise·'sum'.·(str;·default:··'optimal')·[default="optimal"]. | 114 | ····Order·merging·method.·If·'optimal',·the·flux·in·the·overlapping·region··is·set·to·the·(optimally·computed,·using·the·uncertainties)·average·of··single·order·spectra.·If·'sum',·the·flux·in·the·overlapping·region·is··computed·as·the·sum·of·the·single·order·spectra.·If·'noappend'·the··spectrum·is·simply·rebinned·but·not·merged.If·flat-fielding·is·done,··method·'optimal'·is·recommended,·otherwise·'sum'.·(str;·default:··'optimal')·[default="optimal"]. |
| 115 | ..·py:attribute::·uves_obs_scired.param.reduce.merge_delt1 | 115 | ..·py:attribute::·uves_obs_scired.param.reduce.merge_delt1 |
| 116 | ····Order·merging·left·hand·(short·wavelength)·cut.·To·reduce·the·amount··of·order·overlapping·regions·we·allow·to·cut·short·and·long·wavelength··ranges.·This·may·reduce·the·ripple·possibly·introduced·by·the·order··merging.·Suggested·values·are:·10·(W<=390),·12·(390<W<=437,··520<W<=564),·14·(437<W<=520,·564<W)··(float;·default:·0.0)·[default=0.0]. | 116 | ····Order·merging·left·hand·(short·wavelength)·cut.·To·reduce·the·amount··of·order·overlapping·regions·we·allow·to·cut·short·and·long·wavelength··ranges.·This·may·reduce·the·ripple·possibly·introduced·by·the·order··merging.·Suggested·values·are:·10·(W<=390),·12·(390<W<=437,··520<W<=564),·14·(437<W<=520,·564<W)··(float;·default:·0.0)·[default=0.0]. |
| 117 | ..·py:attribute::·uves_obs_scired.param.reduce.merge_delt2 | 117 | ..·py:attribute::·uves_obs_scired.param.reduce.merge_delt2 |
| 118 | ····Order·merging·right·hand·(long·wavelength)·cut.·To·reduce·the·amount··of·order·overlapping·regions·we·allow·to·cut·short·and·long·wavelength··ranges.·This·may·reduce·the·ripple·possibly·introduced·by·the·order··merging.·Suggested·values·is·4·(float;·default:·0.0)·[default=0.0]. | 118 | ····Order·merging·right·hand·(long·wavelength)·cut.·To·reduce·the·amount··of·order·overlapping·regions·we·allow·to·cut·short·and·long·wavelength··ranges.·This·may·reduce·the·ripple·possibly·introduced·by·the·order··merging.·Suggested·values·is·4·(float;·default:·0.0)·[default=0.0]. |
| 119 | ..·py:attribute::·uves_obs_scired.param.reduce.extract.method | ||
| 120 | ····Extraction·method.·(2d/optimal·not·supported·by·uves_cal_wavecal,··weighted·supported·only·by·uves_cal_wavecal,·2d·not·supported·by··uves_cal_response)·(str;·default:·'optimal')·[default="optimal"]. | ||
| 121 | ..·py:attribute::·uves_obs_scired.param.reduce.extract.kappa | ||
| 122 | ····In·optimal·extraction·mode,·this·is·the·threshold·for·bad·(i.e.··hot/cold)·pixel·rejection.·If·a·pixel·deviates·more·than·kappa*sigma··(where·sigma·is·the·uncertainty·of·the·pixel·flux)·from·the·inferred··spatial·profile,·its·weight·is·set·to·zero.·Range:·[-1,100].·If·this··parameter·is·negative,·no·rejection·is·performed.·(float;·default:··10.0)·[default=10.0]. | ||
| 123 | ..·py:attribute::·uves_obs_scired.param.reduce.extract.chunk | ||
| 124 | ····In·optimal·extraction·mode,·the·chunk·size·(in·pixels)·used·for··fitting·the·analytical·profile·(a·fit·of·the·analytical·profile·to··single·bins·would·suffer·from·low·statistics).·(int;·default:·32)·[default=32]. | ||
| 125 | ..·py:attribute::·uves_obs_scired.param.reduce.extract.profile | ||
| 126 | ····In·optimal·extraction·mode,·the·kind·of·profile·to·use.·'gauss'·gives··a·Gaussian·profile,·'moffat'·gives·a·Moffat·profile·with·beta=4·and·a··possible·linear·sky·contribution.·'virtual'·uses·a·virtual·resampling··algorithm·(i.e.·measures·and·uses·the·actual·object·profile).··'constant'·assumes·a·constant·spatial·profile·and·allows·optimal··extraction·of·wavelength·calibration·frames.·'auto'·will·automatically··select·the·best·method·based·on·the·estimated·S/N·of·the·object.·For··low·S/N,·'moffat'·or·'gauss'·are·recommended·(for·robustness).·For··high·S/N,·'virtual'·is·recommended·(for·accuracy).·In·the·case·of··virtual·resampling,·a·precise·determination·of·the·order·positions·is··required;·therefore·the·order-definition·is·repeated·using·the··(assumed·non-low·S/N)·science·frame·(str;·default:·'auto')·[default="auto"]. | ||
| 127 | ..·py:attribute::·uves_obs_scired.param.reduce.extract.skymethod | ||
| 128 | ····In·optimal·extraction·mode,·the·sky·subtraction·method·to·use.··'median'·estimates·the·sky·as·the·median·of·pixels·along·the·slit··(ignoring·pixels·close·to·the·object),·whereas·'optimal'·does·a·chi··square·minimization·along·the·slit·to·obtain·the·best·combined·object··and·sky·levels.·The·optimal·method·gives·the·most·accurate·sky··determination·but·is·also·a·bit·slower·than·the·median·method·(str;··default:·'optimal')·[default="optimal"]. | ||
| 129 | ..·py:attribute::·uves_obs_scired.param.reduce.extract.oversample | ||
| 130 | ····The·oversampling·factor·used·for·the·virtual·resampling·algorithm.·If··negative,·the·value·5·is·used·for·S/N·<=200,·and·the·value·10·is·used··if·the·estimated·S/N·is·>·200·(int;·default:·-1)·[default=-1]. | ||
| 131 | ..·py:attribute::·uves_obs_scired.param.reduce.extract.best | ||
| 132 | ····(optimal·extraction·only)·If·false·(fastest),·the·spectrum·is··extracted·only·once.·If·true·(best),·the·spectrum·is·extracted·twice,··the·second·time·using·improved·variance·estimates·based·on·the·first··iteration.·Better·variance·estimates·slightly·improve·the·obtained··signal·to·noise·but·at·the·cost·of·increased·execution·time·(bool;··default:·True)·[default=True]. | ||
| 119 | ..·py:attribute::·uves_obs_scired.param.reduce.rebin.wavestep | 133 | ..·py:attribute::·uves_obs_scired.param.reduce.rebin.wavestep |
| 120 | ····The·bin·size·(in·w.l.u.)·in·wavelength·space.·If·negative,·a·step·size··of·2/3·*·(·average·pixel·size·)·is·used.·(float;·default:·-1.0)·[default=-1.0]. | 134 | ····The·bin·size·(in·w.l.u.)·in·wavelength·space.·If·negative,·a·step·size··of·2/3·*·(·average·pixel·size·)·is·used.·(float;·default:·-1.0)·[default=-1.0]. |
| 121 | ..·py:attribute::·uves_obs_scired.param.reduce.rebin.scale | 135 | ..·py:attribute::·uves_obs_scired.param.reduce.rebin.scale |
| 122 | ····Whether·or·not·to·multiply·by·the·factor·dx/dlambda·(pixels·per··wavelength)·during·the·rebinning.·This·option·is·disabled·as·default··in·concordance·with·the·method·used·in·the·MIDAS·pipeline.·This·option··should·be·set·to·true·to·convert·the·observed·flux·(in·pixel-space)·to··a·flux·per·wavelength·(in·wavelength-space).·(bool;·default:·False)·[default=False]. | 136 | ····Whether·or·not·to·multiply·by·the·factor·dx/dlambda·(pixels·per··wavelength)·during·the·rebinning.·This·option·is·disabled·as·default··in·concordance·with·the·method·used·in·the·MIDAS·pipeline.·This·option··should·be·set·to·true·to·convert·the·observed·flux·(in·pixel-space)·to··a·flux·per·wavelength·(in·wavelength-space).·(bool;·default:·False)·[default=False]. |
| 123 | ..·py:attribute::·uves_obs_scired.param.reduce.backsub.mmethod | 137 | ..·py:attribute::·uves_obs_scired.param.reduce.backsub.mmethod |
| Offset 138, 35 lines modified | Offset 159, 14 lines modified | ||
| 138 | ····Degree·of·interpolating·splines.·Currently·only·degree·=·1·is··supported·(int;·default:·1)·[default=1]. | 159 | ····Degree·of·interpolating·splines.·Currently·only·degree·=·1·is··supported·(int;·default:·1)·[default=1]. |
| 139 | ..·py:attribute::·uves_obs_scired.param.reduce.backsub.smoothx | 160 | ..·py:attribute::·uves_obs_scired.param.reduce.backsub.smoothx |
| 140 | ····If·spline·interpolation·is·used·to·measure·the·background,·the··x-radius·of·the·post-smoothing·window·is·(smoothx·*·image_width).··Here,·'image_width'·is·the·image·width·after·binning.·If·negative,·the··default·values·are·used:·(25.0/4096)·for·blue·flat-field·frames,··(50.0/4096)·for·red·flat-field·frames,·(300.0/4096)·for·blue·science··frames·and·(300.0/4096)·for·red·science·frames.·(float;·default:·-1.0)·[default=-1.0]. | 161 | ····If·spline·interpolation·is·used·to·measure·the·background,·the··x-radius·of·the·post-smoothing·window·is·(smoothx·*·image_width).··Here,·'image_width'·is·the·image·width·after·binning.·If·negative,·the··default·values·are·used:·(25.0/4096)·for·blue·flat-field·frames,··(50.0/4096)·for·red·flat-field·frames,·(300.0/4096)·for·blue·science··frames·and·(300.0/4096)·for·red·science·frames.·(float;·default:·-1.0)·[default=-1.0]. |
| 141 | ..·py:attribute::·uves_obs_scired.param.reduce.backsub.smoothy | 162 | ..·py:attribute::·uves_obs_scired.param.reduce.backsub.smoothy |
| 142 | ····If·spline·interpolation·is·used·to·measure·the·background,·the··y-radius·of·the·post-smoothing·window·is·(smoothy·*·image_height).··Here,·'image_height'·is·the·image·height·after·binning.·If·negative,··the·default·values·are·used:·(100.0/2048)·for·blue·flat-field·frames,··(300.0/2048)·for·red·flat-field·frames,·(200.0/2048)·for·blue·science··frames·and·(500.0/2048)·for·red·science·frames.·(float;·default:·-1.0)·[default=-1.0]. | 163 | ····If·spline·interpolation·is·used·to·measure·the·background,·the··y-radius·of·the·post-smoothing·window·is·(smoothy·*·image_height).··Here,·'image_height'·is·the·image·height·after·binning.·If·negative,··the·default·values·are·used:·(100.0/2048)·for·blue·flat-field·frames,··(300.0/2048)·for·red·flat-field·frames,·(200.0/2048)·for·blue·science··frames·and·(500.0/2048)·for·red·science·frames.·(float;·default:·-1.0)·[default=-1.0]. |
| 143 | ..·py:attribute::·uves_obs_scired.param.reduce.extract.method | ||
| 144 | ····Extraction·method.·(2d/optimal·not·supported·by·uves_cal_wavecal,··weighted·supported·only·by·uves_cal_wavecal,·2d·not·supported·by··uves_cal_response)·(str;·default:·'optimal')·[default="optimal"]. | ||
| 145 | ..·py:attribute::·uves_obs_scired.param.reduce.extract.kappa | ||
| 146 | ····In·optimal·extraction·mode,·this·is·the·threshold·for·bad·(i.e.··hot/cold)·pixel·rejection.·If·a·pixel·deviates·more·than·kappa*sigma··(where·sigma·is·the·uncertainty·of·the·pixel·flux)·from·the·inferred··spatial·profile,·its·weight·is·set·to·zero.·Range:·[-1,100].·If·this··parameter·is·negative,·no·rejection·is·performed.·(float;·default:··10.0)·[default=10.0]. | ||
| 147 | ..·py:attribute::·uves_obs_scired.param.reduce.extract.chunk | ||
| 148 | ····In·optimal·extraction·mode,·the·chunk·size·(in·pixels)·used·for··fitting·the·analytical·profile·(a·fit·of·the·analytical·profile·to··single·bins·would·suffer·from·low·statistics).·(int;·default:·32)·[default=32]. | ||
| 149 | ..·py:attribute::·uves_obs_scired.param.reduce.extract.profile | ||
| 150 | ····In·optimal·extraction·mode,·the·kind·of·profile·to·use.·'gauss'·gives··a·Gaussian·profile,·'moffat'·gives·a·Moffat·profile·with·beta=4·and·a··possible·linear·sky·contribution.·'virtual'·uses·a·virtual·resampling··algorithm·(i.e.·measures·and·uses·the·actual·object·profile).··'constant'·assumes·a·constant·spatial·profile·and·allows·optimal··extraction·of·wavelength·calibration·frames.·'auto'·will·automatically··select·the·best·method·based·on·the·estimated·S/N·of·the·object.·For··low·S/N,·'moffat'·or·'gauss'·are·recommended·(for·robustness).·For··high·S/N,·'virtual'·is·recommended·(for·accuracy).·In·the·case·of··virtual·resampling,·a·precise·determination·of·the·order·positions·is··required;·therefore·the·order-definition·is·repeated·using·the··(assumed·non-low·S/N)·science·frame·(str;·default:·'auto')·[default="auto"]. | ||
| 151 | ..·py:attribute::·uves_obs_scired.param.reduce.extract.skymethod | ||
| 152 | ····In·optimal·extraction·mode,·the·sky·subtraction·method·to·use.··'median'·estimates·the·sky·as·the·median·of·pixels·along·the·slit··(ignoring·pixels·close·to·the·object),·whereas·'optimal'·does·a·chi··square·minimization·along·the·slit·to·obtain·the·best·combined·object··and·sky·levels.·The·optimal·method·gives·the·most·accurate·sky··determination·but·is·also·a·bit·slower·than·the·median·method·(str;··default:·'optimal')·[default="optimal"]. | ||
| 153 | ..·py:attribute::·uves_obs_scired.param.reduce.extract.oversample | ||
| 154 | ····The·oversampling·factor·used·for·the·virtual·resampling·algorithm.·If··negative,·the·value·5·is·used·for·S/N·<=200,·and·the·value·10·is·used··if·the·estimated·S/N·is·>·200·(int;·default:·-1)·[default=-1]. | ||
| 155 | ..·py:attribute::·uves_obs_scired.param.reduce.extract.best | ||
| 156 | ····(optimal·extraction·only)·If·false·(fastest),·the·spectrum·is··extracted·only·once.·If·true·(best),·the·spectrum·is·extracted·twice,··the·second·time·using·improved·variance·estimates·based·on·the·first··iteration.·Better·variance·estimates·slightly·improve·the·obtained··signal·to·noise·but·at·the·cost·of·increased·execution·time·(bool;··default:·True)·[default=True]. | ||
| 157 | The·following·code·snippet·shows·the·default·settings·for·the·available· | 164 | The·following·code·snippet·shows·the·default·settings·for·the·available· |
| 158 | parameters. | 165 | parameters. |
| 159 | :: | 166 | :: |
| Offset 182, 29 lines modified | Offset 182, 29 lines modified | ||
| 182 | ···uves_obs_scired.param.reduce.objoffset·=·0.0 | 182 | ···uves_obs_scired.param.reduce.objoffset·=·0.0 |
| 183 | ···uves_obs_scired.param.reduce.objslit·=·-1.0 | 183 | ···uves_obs_scired.param.reduce.objslit·=·-1.0 |
| 184 | ···uves_obs_scired.param.reduce.tiltcorr·=·True | 184 | ···uves_obs_scired.param.reduce.tiltcorr·=·True |
| 185 | ···uves_obs_scired.param.reduce.ffmethod·=·"extract" | 185 | ···uves_obs_scired.param.reduce.ffmethod·=·"extract" |
| 186 | ···uves_obs_scired.param.reduce.merge·=·"optimal" | 186 | ···uves_obs_scired.param.reduce.merge·=·"optimal" |
| 187 | ···uves_obs_scired.param.reduce.merge_delt1·=·0.0 | 187 | ···uves_obs_scired.param.reduce.merge_delt1·=·0.0 |
| 188 | ···uves_obs_scired.param.reduce.merge_delt2·=·0.0 | 188 | ···uves_obs_scired.param.reduce.merge_delt2·=·0.0 |
| 189 | ···uves_obs_scired.param.reduce.extract.method·=·"optimal" | ||
| 190 | ···uves_obs_scired.param.reduce.extract.kappa·=·10.0 | ||
| 191 | ···uves_obs_scired.param.reduce.extract.chunk·=·32 | ||
| 192 | ···uves_obs_scired.param.reduce.extract.profile·=·"auto" | ||
| 193 | ···uves_obs_scired.param.reduce.extract.skymethod·=·"optimal" | ||
| 194 | ···uves_obs_scired.param.reduce.extract.oversample·=·-1 | ||
| 195 | ···uves_obs_scired.param.reduce.extract.best·=·True | ||
| 189 | ···uves_obs_scired.param.reduce.rebin.wavestep·=·-1.0 | 196 | ···uves_obs_scired.param.reduce.rebin.wavestep·=·-1.0 |
| 190 | ···uves_obs_scired.param.reduce.rebin.scale·=·False | 197 | ···uves_obs_scired.param.reduce.rebin.scale·=·False |
| 191 | ···uves_obs_scired.param.reduce.backsub.mmethod·=·"median" | 198 | ···uves_obs_scired.param.reduce.backsub.mmethod·=·"median" |
| 192 | ···uves_obs_scired.param.reduce.backsub.npoints·=·82 | 199 | ···uves_obs_scired.param.reduce.backsub.npoints·=·82 |
| 193 | ···uves_obs_scired.param.reduce.backsub.radiusy·=·2 | 200 | ···uves_obs_scired.param.reduce.backsub.radiusy·=·2 |
| 194 | ···uves_obs_scired.param.reduce.backsub.sdegree·=·1 | 201 | ···uves_obs_scired.param.reduce.backsub.sdegree·=·1 |
| 195 | ···uves_obs_scired.param.reduce.backsub.smoothx·=·-1.0 | 202 | ···uves_obs_scired.param.reduce.backsub.smoothx·=·-1.0 |
| 196 | ···uves_obs_scired.param.reduce.backsub.smoothy·=·-1.0 | 203 | ···uves_obs_scired.param.reduce.backsub.smoothy·=·-1.0 |
| 197 | ···uves_obs_scired.param.reduce.extract.method·=·"optimal" | ||
| 198 | ···uves_obs_scired.param.reduce.extract.kappa·=·10.0 | ||
| 199 | ···uves_obs_scired.param.reduce.extract.chunk·=·32 | ||
| 200 | ···uves_obs_scired.param.reduce.extract.profile·=·"auto" | ||
| 201 | ···uves_obs_scired.param.reduce.extract.skymethod·=·"optimal" | ||
| 202 | ···uves_obs_scired.param.reduce.extract.oversample·=·-1 | ||
| 203 | ···uves_obs_scired.param.reduce.extract.best·=·True | ||
| 204 | You·may·also·set·or·overwrite·some·or·all·parameters·by·the·recipe· | 204 | You·may·also·set·or·overwrite·some·or·all·parameters·by·the·recipe· |
| 205 | parameter·`param`,·as·shown·in·the·following·example: | 205 | parameter·`param`,·as·shown·in·the·following·example: |
| 206 | :: | 206 | :: |
| Offset 268, 26 lines modified | Offset 268, 14 lines modified | ||
| 268 | <dl·class="attribute"> | 268 | <dl·class="attribute"> |
| 269 | <dt·id="flames_cal_wavecal.param.kappa"> | 269 | <dt·id="flames_cal_wavecal.param.kappa"> |
| 270 | <code·class="descclassname">flames_cal_wavecal.param.</code><code·class="descname">kappa</code><a·class="headerlink"·href="#flames_cal_wavecal.param.kappa"·title="Permalink·to·this·definition">¶</a></dt> | 270 | <code·class="descclassname">flames_cal_wavecal.param.</code><code·class="descname">kappa</code><a·class="headerlink"·href="#flames_cal_wavecal.param.kappa"·title="Permalink·to·this·definition">¶</a></dt> |
| 271 | <dd><p>Lines·with·residuals·more·then·kappa·stdev·are·rejected·from·the·final··fit·(float;·default:·4.0)·[default=4.0].</p> | 271 | <dd><p>Lines·with·residuals·more·then·kappa·stdev·are·rejected·from·the·final··fit·(float;·default:·4.0)·[default=4.0].</p> |
| 272 | </dd></dl> | 272 | </dd></dl> |
| 273 | <dl·class="attribute"> | 273 | <dl·class="attribute"> |
| 274 | <dt·id="flames_cal_wavecal.param.rebin.wavestep"> | ||
| 275 | <code·class="descclassname">flames_cal_wavecal.param.rebin.</code><code·class="descname">wavestep</code><a·class="headerlink"·href="#flames_cal_wavecal.param.rebin.wavestep"·title="Permalink·to·this·definition">¶</a></dt> | ||
| 276 | <dd><p>The·bin·size·(in·w.l.u.)·in·wavelength·space.·If·negative,·a·step·size··of·2/3·*·(·average·pixel·size·)·is·used.·(float;·default:·-1.0)·[default=-1.0].</p> | ||
| 277 | </dd></dl> | ||
| 278 | <dl·class="attribute"> | ||
| 279 | <dt·id="flames_cal_wavecal.param.rebin.scale"> | ||
| 280 | <code·class="descclassname">flames_cal_wavecal.param.rebin.</code><code·class="descname">scale</code><a·class="headerlink"·href="#flames_cal_wavecal.param.rebin.scale"·title="Permalink·to·this·definition">¶</a></dt> | ||
| 281 | <dd><p>Whether·or·not·to·multiply·by·the·factor·dx/dlambda·(pixels·per··wavelength)·during·the·rebinning.·This·option·is·disabled·as·default··in·concordance·with·the·method·used·in·the·MIDAS·pipeline.·This·option··should·be·set·to·true·to·convert·the·observed·flux·(in·pixel-space)·to··a·flux·per·wavelength·(in·wavelength-space).·(bool;·default:·False)·[default=False].</p> | ||
| 282 | </dd></dl> | ||
| 283 | <dl·class="attribute"> | ||
| 284 | <dt·id="flames_cal_wavecal.param.extract.method"> | 274 | <dt·id="flames_cal_wavecal.param.extract.method"> |
| 285 | <code·class="descclassname">flames_cal_wavecal.param.extract.</code><code·class="descname">method</code><a·class="headerlink"·href="#flames_cal_wavecal.param.extract.method"·title="Permalink·to·this·definition">¶</a></dt> | 275 | <code·class="descclassname">flames_cal_wavecal.param.extract.</code><code·class="descname">method</code><a·class="headerlink"·href="#flames_cal_wavecal.param.extract.method"·title="Permalink·to·this·definition">¶</a></dt> |
| 286 | <dd><p>Extraction·method.·(2d/optimal·not·supported·by·uves_cal_wavecal,··weighted·supported·only·by·uves_cal_wavecal,·2d·not·supported·by··uves_cal_response)·(str;·default:·‘average’)·[default=”average”].</p> | 276 | <dd><p>Extraction·method.·(2d/optimal·not·supported·by·uves_cal_wavecal,··weighted·supported·only·by·uves_cal_wavecal,·2d·not·supported·by··uves_cal_response)·(str;·default:·‘average’)·[default=”average”].</p> |
| 287 | </dd></dl> | 277 | </dd></dl> |
| 288 | <dl·class="attribute"> | 278 | <dl·class="attribute"> |
| 289 | <dt·id="flames_cal_wavecal.param.extract.kappa"> | 279 | <dt·id="flames_cal_wavecal.param.extract.kappa"> |
| Offset 321, 14 lines modified | Offset 309, 26 lines modified | ||
| 321 | <dl·class="attribute"> | 309 | <dl·class="attribute"> |
| 322 | <dt·id="flames_cal_wavecal.param.extract.best"> | 310 | <dt·id="flames_cal_wavecal.param.extract.best"> |
| 323 | <code·class="descclassname">flames_cal_wavecal.param.extract.</code><code·class="descname">best</code><a·class="headerlink"·href="#flames_cal_wavecal.param.extract.best"·title="Permalink·to·this·definition">¶</a></dt> | 311 | <code·class="descclassname">flames_cal_wavecal.param.extract.</code><code·class="descname">best</code><a·class="headerlink"·href="#flames_cal_wavecal.param.extract.best"·title="Permalink·to·this·definition">¶</a></dt> |
| 324 | <dd><p>(optimal·extraction·only)·If·false·(fastest),·the·spectrum·is··extracted·only·once.·If·true·(best),·the·spectrum·is·extracted·twice,··the·second·time·using·improved·variance·estimates·based·on·the·first··iteration.·Better·variance·estimates·slightly·improve·the·obtained··signal·to·noise·but·at·the·cost·of·increased·execution·time·(bool;··default:·True)·[default=True].</p> | 312 | <dd><p>(optimal·extraction·only)·If·false·(fastest),·the·spectrum·is··extracted·only·once.·If·true·(best),·the·spectrum·is·extracted·twice,··the·second·time·using·improved·variance·estimates·based·on·the·first··iteration.·Better·variance·estimates·slightly·improve·the·obtained··signal·to·noise·but·at·the·cost·of·increased·execution·time·(bool;··default:·True)·[default=True].</p> |
| 325 | </dd></dl> | 313 | </dd></dl> |
| 314 | <dl·class="attribute"> | ||
| 315 | <dt·id="flames_cal_wavecal.param.rebin.wavestep"> | ||
| 316 | <code·class="descclassname">flames_cal_wavecal.param.rebin.</code><code·class="descname">wavestep</code><a·class="headerlink"·href="#flames_cal_wavecal.param.rebin.wavestep"·title="Permalink·to·this·definition">¶</a></dt> | ||
| 317 | <dd><p>The·bin·size·(in·w.l.u.)·in·wavelength·space.·If·negative,·a·step·size··of·2/3·*·(·average·pixel·size·)·is·used.·(float;·default:·-1.0)·[default=-1.0].</p> | ||
| 318 | </dd></dl> | ||
| 319 | <dl·class="attribute"> | ||
| 320 | <dt·id="flames_cal_wavecal.param.rebin.scale"> | ||
| 321 | <code·class="descclassname">flames_cal_wavecal.param.rebin.</code><code·class="descname">scale</code><a·class="headerlink"·href="#flames_cal_wavecal.param.rebin.scale"·title="Permalink·to·this·definition">¶</a></dt> | ||
| 322 | <dd><p>Whether·or·not·to·multiply·by·the·factor·dx/dlambda·(pixels·per··wavelength)·during·the·rebinning.·This·option·is·disabled·as·default··in·concordance·with·the·method·used·in·the·MIDAS·pipeline.·This·option··should·be·set·to·true·to·convert·the·observed·flux·(in·pixel-space)·to··a·flux·per·wavelength·(in·wavelength-space).·(bool;·default:·False)·[default=False].</p> | ||
| 323 | </dd></dl> | ||
| 326 | <p>The·following·code·snippet·shows·the·default·settings·for·the·available | 324 | <p>The·following·code·snippet·shows·the·default·settings·for·the·available |
| 327 | parameters.</p> | 325 | parameters.</p> |
| 328 | <div·class="highlight-default·notranslate"><div·class="highlight"><pre><span></span><span·class="kn">import</span>·<span·class="nn">cpl</span> | 326 | <div·class="highlight-default·notranslate"><div·class="highlight"><pre><span></span><span·class="kn">import</span>·<span·class="nn">cpl</span> |
| 329 | <span·class="n">flames_cal_wavecal</span>·<span·class="o">=</span>·<span·class="n">cpl</span><span·class="o">.</span><span·class="n">Recipe</span><span·class="p">(</span><span·class="s2">"flames_cal_wavecal"</span><span·class="p">)</span> | 327 | <span·class="n">flames_cal_wavecal</span>·<span·class="o">=</span>·<span·class="n">cpl</span><span·class="o">.</span><span·class="n">Recipe</span><span·class="p">(</span><span·class="s2">"flames_cal_wavecal"</span><span·class="p">)</span> |
| 330 | <span·class="n">flames_cal_wavecal</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">debug</span>·<span·class="o">=</span>·<span·class="kc">False</span> | 328 | <span·class="n">flames_cal_wavecal</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">debug</span>·<span·class="o">=</span>·<span·class="kc">False</span> |
| 331 | <span·class="n">flames_cal_wavecal</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">plotter</span>·<span·class="o">=</span>·<span·class="s2">"no"</span> | 329 | <span·class="n">flames_cal_wavecal</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">plotter</span>·<span·class="o">=</span>·<span·class="s2">"no"</span> |
| Offset 343, 23 lines modified | Offset 343, 23 lines modified | ||
| 343 | <span·class="n">flames_cal_wavecal</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">shiftstep</span>·<span·class="o">=</span>·<span·class="mf">0.1</span> | 343 | <span·class="n">flames_cal_wavecal</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">shiftstep</span>·<span·class="o">=</span>·<span·class="mf">0.1</span> |
| 344 | <span·class="n">flames_cal_wavecal</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">shifttoler</span>·<span·class="o">=</span>·<span·class="mf">0.05</span> | 344 | <span·class="n">flames_cal_wavecal</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">shifttoler</span>·<span·class="o">=</span>·<span·class="mf">0.05</span> |
| 345 | <span·class="n">flames_cal_wavecal</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">alpha</span>·<span·class="o">=</span>·<span·class="mf">0.1</span> | 345 | <span·class="n">flames_cal_wavecal</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">alpha</span>·<span·class="o">=</span>·<span·class="mf">0.1</span> |
| 346 | <span·class="n">flames_cal_wavecal</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">maxerror</span>·<span·class="o">=</span>·<span·class="mf">20.0</span> | 346 | <span·class="n">flames_cal_wavecal</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">maxerror</span>·<span·class="o">=</span>·<span·class="mf">20.0</span> |
| 347 | <span·class="n">flames_cal_wavecal</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">degree</span>·<span·class="o">=</span>·<span·class="mi">4</span> | 347 | <span·class="n">flames_cal_wavecal</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">degree</span>·<span·class="o">=</span>·<span·class="mi">4</span> |
| 348 | <span·class="n">flames_cal_wavecal</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">tolerance</span>·<span·class="o">=</span>·<span·class="mf">0.6</span> | 348 | <span·class="n">flames_cal_wavecal</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">tolerance</span>·<span·class="o">=</span>·<span·class="mf">0.6</span> |
| 349 | <span·class="n">flames_cal_wavecal</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">kappa</span>·<span·class="o">=</span>·<span·class="mf">4.0</span> | 349 | <span·class="n">flames_cal_wavecal</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">kappa</span>·<span·class="o">=</span>·<span·class="mf">4.0</span> |
| 350 | <span·class="n">flames_cal_wavecal</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">rebin</span><span·class="o">.</span><span·class="n">wavestep</span>·<span·class="o">=</span>·<span·class="o">-</span><span·class="mf">1.0</span> | ||
| 351 | <span·class="n">flames_cal_wavecal</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">rebin</span><span·class="o">.</span><span·class="n">scale</span>·<span·class="o">=</span>·<span·class="kc">False</span> | ||
| 352 | <span·class="n">flames_cal_wavecal</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">extract</span><span·class="o">.</span><span·class="n">method</span>·<span·class="o">=</span>·<span·class="s2">"average"</span> | 350 | <span·class="n">flames_cal_wavecal</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">extract</span><span·class="o">.</span><span·class="n">method</span>·<span·class="o">=</span>·<span·class="s2">"average"</span> |
| 353 | <span·class="n">flames_cal_wavecal</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">extract</span><span·class="o">.</span><span·class="n">kappa</span>·<span·class="o">=</span>·<span·class="mf">10.0</span> | 351 | <span·class="n">flames_cal_wavecal</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">extract</span><span·class="o">.</span><span·class="n">kappa</span>·<span·class="o">=</span>·<span·class="mf">10.0</span> |
| 354 | <span·class="n">flames_cal_wavecal</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">extract</span><span·class="o">.</span><span·class="n">chunk</span>·<span·class="o">=</span>·<span·class="mi">32</span> | 352 | <span·class="n">flames_cal_wavecal</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">extract</span><span·class="o">.</span><span·class="n">chunk</span>·<span·class="o">=</span>·<span·class="mi">32</span> |
| 355 | <span·class="n">flames_cal_wavecal</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">extract</span><span·class="o">.</span><span·class="n">profile</span>·<span·class="o">=</span>·<span·class="s2">"auto"</span> | 353 | <span·class="n">flames_cal_wavecal</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">extract</span><span·class="o">.</span><span·class="n">profile</span>·<span·class="o">=</span>·<span·class="s2">"auto"</span> |
| 356 | <span·class="n">flames_cal_wavecal</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">extract</span><span·class="o">.</span><span·class="n">skymethod</span>·<span·class="o">=</span>·<span·class="s2">"optimal"</span> | 354 | <span·class="n">flames_cal_wavecal</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">extract</span><span·class="o">.</span><span·class="n">skymethod</span>·<span·class="o">=</span>·<span·class="s2">"optimal"</span> |
| 357 | <span·class="n">flames_cal_wavecal</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">extract</span><span·class="o">.</span><span·class="n">oversample</span>·<span·class="o">=</span>·<span·class="o">-</span><span·class="mi">1</span> | 355 | <span·class="n">flames_cal_wavecal</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">extract</span><span·class="o">.</span><span·class="n">oversample</span>·<span·class="o">=</span>·<span·class="o">-</span><span·class="mi">1</span> |
| 358 | <span·class="n">flames_cal_wavecal</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">extract</span><span·class="o">.</span><span·class="n">best</span>·<span·class="o">=</span>·<span·class="kc">True</span> | 356 | <span·class="n">flames_cal_wavecal</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">extract</span><span·class="o">.</span><span·class="n">best</span>·<span·class="o">=</span>·<span·class="kc">True</span> |
| 357 | <span·class="n">flames_cal_wavecal</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">rebin</span><span·class="o">.</span><span·class="n">wavestep</span>·<span·class="o">=</span>·<span·class="o">-</span><span·class="mf">1.0</span> | ||
| 358 | <span·class="n">flames_cal_wavecal</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">rebin</span><span·class="o">.</span><span·class="n">scale</span>·<span·class="o">=</span>·<span·class="kc">False</span> | ||
| 359 | </pre></div> | 359 | </pre></div> |
| 360 | </div> | 360 | </div> |
| 361 | <p>You·may·also·set·or·overwrite·some·or·all·parameters·by·the·recipe | 361 | <p>You·may·also·set·or·overwrite·some·or·all·parameters·by·the·recipe |
| 362 | parameter·<cite>param</cite>,·as·shown·in·the·following·example:</p> | 362 | parameter·<cite>param</cite>,·as·shown·in·the·following·example:</p> |
| 363 | <div·class="highlight-default·notranslate"><div·class="highlight"><pre><span></span><span·class="kn">import</span>·<span·class="nn">cpl</span> | 363 | <div·class="highlight-default·notranslate"><div·class="highlight"><pre><span></span><span·class="kn">import</span>·<span·class="nn">cpl</span> |
| 364 | <span·class="n">flames_cal_wavecal</span>·<span·class="o">=</span>·<span·class="n">cpl</span><span·class="o">.</span><span·class="n">Recipe</span><span·class="p">(</span><span·class="s2">"flames_cal_wavecal"</span><span·class="p">)</span> | 364 | <span·class="n">flames_cal_wavecal</span>·<span·class="o">=</span>·<span·class="n">cpl</span><span·class="o">.</span><span·class="n">Recipe</span><span·class="p">(</span><span·class="s2">"flames_cal_wavecal"</span><span·class="p">)</span> |
| 365 | <span·class="p">[</span><span·class="o">...</span><span·class="p">]</span> | 365 | <span·class="p">[</span><span·class="o">...</span><span·class="p">]</span> |
| Offset 152, 317 lines modified | Offset 152, 221 lines modified | ||
| 152 | <dl·class="attribute"> | 152 | <dl·class="attribute"> |
| 153 | <dt·id="flames_obs_redchain.param.process_chip"> | 153 | <dt·id="flames_obs_redchain.param.process_chip"> |
| 154 | <code·class="descclassname">flames_obs_redchain.param.</code><code·class="descname">process_chip</code><a·class="headerlink"·href="#flames_obs_redchain.param.process_chip"·title="Permalink·to·this·definition">¶</a></dt> | 154 | <code·class="descclassname">flames_obs_redchain.param.</code><code·class="descname">process_chip</code><a·class="headerlink"·href="#flames_obs_redchain.param.process_chip"·title="Permalink·to·this·definition">¶</a></dt> |
| 155 | <dd><p>For·RED·arm·data·process·the·redl,·redu,·or·both·chip(s)·(str;··default:·‘both’)·[default=”both”].</p> | 155 | <dd><p>For·RED·arm·data·process·the·redl,·redu,·or·both·chip(s)·(str;··default:·‘both’)·[default=”both”].</p> |
| 156 | </dd></dl> | 156 | </dd></dl> |
| 157 | <dl·class="attribute"> | 157 | <dl·class="attribute"> |
| 158 | <dt·id="flames_obs_redchain.param.flames_cal_predict.mbox_x"> | ||
| 159 | <code·class="descclassname">flames_obs_redchain.param.flames_cal_predict.</code><code·class="descname">mbox_x</code><a·class="headerlink"·href="#flames_obs_redchain.param.flames_cal_predict.mbox_x"·title="Permalink·to·this·definition">¶</a></dt> | ||
| 160 | <dd><p>Match·box·X·size·(int;·default:·40)·[default=40].</p> | ||
| 161 | </dd></dl> | ||
| 162 | <dl·class="attribute"> | ||
| 163 | <dt·id="flames_obs_redchain.param.flames_cal_predict.mbox_y"> | ||
| 164 | <code·class="descclassname">flames_obs_redchain.param.flames_cal_predict.</code><code·class="descname">mbox_y</code><a·class="headerlink"·href="#flames_obs_redchain.param.flames_cal_predict.mbox_y"·title="Permalink·to·this·definition">¶</a></dt> | ||
| 165 | <dd><p>Match·box·Y·size·(int;·default:·40)·[default=40].</p> | ||
| 166 | </dd></dl> | ||
| 167 | <dl·class="attribute"> | ||
| 168 | <dt·id="flames_obs_redchain.param.flames_cal_predict.trans_x"> | ||
| 169 | <code·class="descclassname">flames_obs_redchain.param.flames_cal_predict.</code><code·class="descname">trans_x</code><a·class="headerlink"·href="#flames_obs_redchain.param.flames_cal_predict.trans_x"·title="Permalink·to·this·definition">¶</a></dt> | ||
| 170 | <dd><p>Detector·translation·along·X·(float;·default:·0.0)·[default=0.0].</p> | ||
| 171 | </dd></dl> | ||
| 172 | <dl·class="attribute"> | ||
| 173 | <dt·id="flames_obs_redchain.param.flames_cal_predict.trans_y"> | ||
| 174 | <code·class="descclassname">flames_obs_redchain.param.flames_cal_predict.</code><code·class="descname">trans_y</code><a·class="headerlink"·href="#flames_obs_redchain.param.flames_cal_predict.trans_y"·title="Permalink·to·this·definition">¶</a></dt> | ||
| 175 | <dd><p>Detector·translation·along·Y·(float;·default:·0.0)·[default=0.0].</p> | ||
| 176 | </dd></dl> | ||
| 177 | <dl·class="attribute"> | ||
| 178 | <dt·id="flames_obs_redchain.param.flames_cal_predict.ech_angle_off"> | ||
| 179 | <code·class="descclassname">flames_obs_redchain.param.flames_cal_predict.</code><code·class="descname">ech_angle_off</code><a·class="headerlink"·href="#flames_obs_redchain.param.flames_cal_predict.ech_angle_off"·title="Permalink·to·this·definition">¶</a></dt> | ||
| 180 | <dd><p>Offset·on·echelle·angle·(float;·default:·0.0)·[default=0.0].</p> | ||
| 181 | </dd></dl> | ||
| 182 | <dl·class="attribute"> | ||
| 183 | <dt·id="flames_obs_redchain.param.flames_cal_predict.cd_angle_off"> | ||
| 184 | <code·class="descclassname">flames_obs_redchain.param.flames_cal_predict.</code><code·class="descname">cd_angle_off</code><a·class="headerlink"·href="#flames_obs_redchain.param.flames_cal_predict.cd_angle_off"·title="Permalink·to·this·definition">¶</a></dt> | ||
| 185 | <dd><p>Offset·on·cross·disperser·angle·(float;·default:·0.0)·[default=0.0].</p> | ||
| 186 | </dd></dl> | ||
| 187 | <dl·class="attribute"> | ||
| 188 | <dt·id="flames_obs_redchain.param.flames_cal_predict.ccd_rot_angle_off"> | ||
| 189 | <code·class="descclassname">flames_obs_redchain.param.flames_cal_predict.</code><code·class="descname">ccd_rot_angle_off</code><a·class="headerlink"·href="#flames_obs_redchain.param.flames_cal_predict.ccd_rot_angle_off"·title="Permalink·to·this·definition">¶</a></dt> | ||
| 190 | <dd><p>Offset·on·CCD·rotation·angle·(float;·default:·0.0)·[default=0.0].</p> | ||
| 191 | </dd></dl> | ||
| 192 | <dl·class="attribute"> | ||
| 193 | <dt·id="flames_obs_redchain.param.flames_cal_predict.compute_regression_sw"> | ||
| 194 | <code·class="descclassname">flames_obs_redchain.param.flames_cal_predict.</code><code·class="descname">compute_regression_sw</code><a·class="headerlink"·href="#flames_obs_redchain.param.flames_cal_predict.compute_regression_sw"·title="Permalink·to·this·definition">¶</a></dt> | ||
| 195 | <dd><p>Compute·regression?·(bool;·default:·True)·[default=True].</p> | ||
| 196 | </dd></dl> | ||
| 197 | <dl·class="attribute"> | ||
| 198 | <dt·id="flames_obs_redchain.param.flames_cal_predict.def_pol1"> | ||
| 199 | <code·class="descclassname">flames_obs_redchain.param.flames_cal_predict.</code><code·class="descname">def_pol1</code><a·class="headerlink"·href="#flames_obs_redchain.param.flames_cal_predict.def_pol1"·title="Permalink·to·this·definition">¶</a></dt> | ||
| 200 | <dd><p>Polynomial·X·deg·(int;·default:·4)·[default=4].</p> | ||
| 201 | </dd></dl> | ||
| 202 | <dl·class="attribute"> | ||
| 203 | <dt·id="flames_obs_redchain.param.flames_cal_predict.def_pol2"> | ||
| 204 | <code·class="descclassname">flames_obs_redchain.param.flames_cal_predict.</code><code·class="descname">def_pol2</code><a·class="headerlink"·href="#flames_obs_redchain.param.flames_cal_predict.def_pol2"·title="Permalink·to·this·definition">¶</a></dt> | ||
| 205 | <dd><p>Polynomial·Y·deg·(int;·default:·5)·[default=5].</p> | ||
| 206 | </dd></dl> | ||
| 207 | <dl·class="attribute"> | ||
| 208 | <dt·id="flames_obs_redchain.param.flames_cal_predict.kappa"> | ||
| 209 | <code·class="descclassname">flames_obs_redchain.param.flames_cal_predict.</code><code·class="descname">kappa</code><a·class="headerlink"·href="#flames_obs_redchain.param.flames_cal_predict.kappa"·title="Permalink·to·this·definition">¶</a></dt> | ||
| 210 | <dd><p>Kappa·value·in·kappa·sigma·clipping·on·RESIDUAL·between·YFIT·and·Y··columns·(float;·default:·4.5)·[default=4.5].</p> | ||
| 211 | </dd></dl> | ||
| 212 | <dl·class="attribute"> | ||
| 213 | <dt·id="flames_obs_redchain.param.flames_cal_predict.tol"> | ||
| 214 | <code·class="descclassname">flames_obs_redchain.param.flames_cal_predict.</code><code·class="descname">tol</code><a·class="headerlink"·href="#flames_obs_redchain.param.flames_cal_predict.tol"·title="Permalink·to·this·definition">¶</a></dt> | ||
| 215 | <dd><p>Tolerance·in·kappa·sigma·clipping·on·RESIDUAL·between·YFIT·and·Y··columns·(float;·default:·2.0)·[default=2.0].</p> | ||
| 216 | </dd></dl> | ||
| 217 | <dl·class="attribute"> | ||
| 218 | <dt·id="flames_obs_redchain.param.flames_ | 158 | <dt·id="flames_obs_redchain.param.flames_cal_prep_sff_ofpos.ext_method"> |
| 219 | <code·class="descclassname">flames_obs_redchain.param.flames_ | 159 | <code·class="descclassname">flames_obs_redchain.param.flames_cal_prep_sff_ofpos.</code><code·class="descname">ext_method</code><a·class="headerlink"·href="#flames_obs_redchain.param.flames_cal_prep_sff_ofpos.ext_method"·title="Permalink·to·this·definition">¶</a></dt> |
| 220 | <dd><p>Extraction·method·(str;·default:·‘opt’)·[default=”opt”].</p> | 160 | <dd><p>Extraction·method·(str;·default:·‘opt’)·[default=”opt”].</p> |
| 221 | </dd></dl> | 161 | </dd></dl> |
| 222 | <dl·class="attribute"> | 162 | <dl·class="attribute"> |
| 163 | <dt·id="flames_obs_redchain.param.flames_cal_prep_sff_ofpos.bias_method"> | ||
| 164 | <code·class="descclassname">flames_obs_redchain.param.flames_cal_prep_sff_ofpos.</code><code·class="descname">bias_method</code><a·class="headerlink"·href="#flames_obs_redchain.param.flames_cal_prep_sff_ofpos.bias_method"·title="Permalink·to·this·definition">¶</a></dt> | ||
| 165 | <dd><p>Bias·subtraction·method,·M·for·master·bias·frame,·N·for·no·bias··subtraction,·V·to·subtract·a·constant·bias·level·defined·by·the··parameter·bias_value·(str;·default:·‘M’)·[default=”M”].</p> | ||
| 223 | <dt·id="flames_obs_redchain.param.flames_obs_scired.cor_max_fnd"> | ||
| 224 | <code·class="descclassname">flames_obs_redchain.param.flames_obs_scired.</code><code·class="descname">cor_max_fnd</code><a·class="headerlink"·href="#flames_obs_redchain.param.flames_obs_scired.cor_max_fnd"·title="Permalink·to·this·definition">¶</a></dt> | ||
| 225 | <dd><p>Find·correlation·maximum?·(str;·default:·‘Y’)·[default=”Y”].</p> | ||
| 226 | </dd></dl> | ||
| 227 | <dl·class="attribute"> | ||
| 228 | <dt·id="flames_obs_redchain.param.flames_obs_scired.cor_def_rng"> | ||
| 229 | <code·class="descclassname">flames_obs_redchain.param.flames_obs_scired.</code><code·class="descname">cor_def_rng</code><a·class="headerlink"·href="#flames_obs_redchain.param.flames_obs_scired.cor_def_rng"·title="Permalink·to·this·definition">¶</a></dt> | ||
| 230 | <dd><p>Correlation·range·size?·(float;·default:·6.0)·[default=6.0].</p> | ||
| 231 | </dd></dl> | ||
| 232 | <dl·class="attribute"> | ||
| 233 | <dt·id="flames_obs_redchain.param.flames_obs_scired.cor_def_pnt"> | ||
| 234 | <code·class="descclassname">flames_obs_redchain.param.flames_obs_scired.</code><code·class="descname">cor_def_pnt</code><a·class="headerlink"·href="#flames_obs_redchain.param.flames_obs_scired.cor_def_pnt"·title="Permalink·to·this·definition">¶</a></dt> | ||
| 235 | <dd><p>Correlation·sampling·points?·(int;·default:·25)·[default=25].</p> | ||
| 236 | </dd></dl> | ||
| 237 | <dl·class="attribute"> | ||
| 238 | <dt·id="flames_obs_redchain.param.flames_obs_scired.cor_def_off"> | ||
| 239 | <code·class="descclassname">flames_obs_redchain.param.flames_obs_scired.</code><code·class="descname">cor_def_off</code><a·class="headerlink"·href="#flames_obs_redchain.param.flames_obs_scired.cor_def_off"·title="Permalink·to·this·definition">¶</a></dt> | ||
| 240 | <dd><p>Correlation·center·offset?·(float;·default:·0.0)·[default=0.0].</p> | ||
| 241 | </dd></dl> | ||
| 242 | <dl·class="attribute"> | ||
| 243 | <dt·id="flames_obs_redchain.param.flames_obs_scired.corvel_iter"> | ||
| 244 | <code·class="descclassname">flames_obs_redchain.param.flames_obs_scired.</code><code·class="descname">corvel_iter</code><a·class="headerlink"·href="#flames_obs_redchain.param.flames_obs_scired.corvel_iter"·title="Permalink·to·this·definition">¶</a></dt> | ||
| 245 | <dd><p>Velocity·correlation·iteration·number·(SimCal)·(int;·default:·1)·[default=1].</p> | ||
| 246 | </dd></dl> | 166 | </dd></dl> |
| 247 | <dl·class="attribute"> | 167 | <dl·class="attribute"> |
| 248 | <dt·id="flames_obs_redchain.param.flames_ | 168 | <dt·id="flames_obs_redchain.param.flames_cal_prep_sff_ofpos.bias_value"> |
| 249 | <code·class="descclassname">flames_obs_redchain.param.flames_obs_scired.</code><code·class="descname">bias_method</code><a·class="headerlink"·href="#flames_obs_redchain.param.flames_obs_scired.bias_method"·title="Permalink·to·this·definition">¶</a></dt> | ||
| 250 | <dd | 169 | <code·class="descclassname">flames_obs_redchain.param.flames_cal_prep_sff_ofpos.</code><code·class="descname">bias_value</code><a·class="headerlink"·href="#flames_obs_redchain.param.flames_cal_prep_sff_ofpos.bias_value"·title="Permalink·to·this·definition">¶</a></dt> |
| 170 | <dd><p>Bias·value·(only·if·bias_method·=·V)·(int;·default:·200)·[default=200].</p> | ||
| 251 | </dd></dl> | 171 | </dd></dl> |
| 252 | <dl·class="attribute"> | 172 | <dl·class="attribute"> |
| 253 | <dt·id="flames_obs_redchain.param.flames_obs_scired.bias_value"> | ||
| 254 | <code·class="descclassname">flames_obs_redchain.param.flames_obs_scired.</code><code·class="descname">bias_value</code><a·class="headerlink"·href="#flames_obs_redchain.param.flames_obs_scired.bias_value"·title="Permalink·to·this·definition">¶</a></dt> | ||
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| 207 | <dl·class="attribute"> | 207 | <dl·class="attribute"> |
| 208 | <dt·id="uves_cal_mkmaster.param.norm_method"> | 208 | <dt·id="uves_cal_mkmaster.param.norm_method"> |
| 209 | <code·class="descclassname">uves_cal_mkmaster.param.</code><code·class="descname">norm_method</code><a·class="headerlink"·href="#uves_cal_mkmaster.param.norm_method"·title="Permalink·to·this·definition">¶</a></dt> | 209 | <code·class="descclassname">uves_cal_mkmaster.param.</code><code·class="descname">norm_method</code><a·class="headerlink"·href="#uves_cal_mkmaster.param.norm_method"·title="Permalink·to·this·definition">¶</a></dt> |
| 210 | <dd><p>Method·used·to·build·master·frame··(str;·default:·‘explevel’)·[default=”explevel”].</p> | 210 | <dd><p>Method·used·to·build·master·frame··(str;·default:·‘explevel’)·[default=”explevel”].</p> |
| 211 | </dd></dl> | 211 | </dd></dl> |
| 212 | <dl·class="attribute"> | 212 | <dl·class="attribute"> |
| 213 | <dt·id="uves_cal_mkmaster.param.backsub.mmethod"> | ||
| 214 | <code·class="descclassname">uves_cal_mkmaster.param.backsub.</code><code·class="descname">mmethod</code><a·class="headerlink"·href="#uves_cal_mkmaster.param.backsub.mmethod"·title="Permalink·to·this·definition">¶</a></dt> | ||
| 215 | <dd><p>Background·measuring·method.·If·equal·to·‘median’·the·background·is··sampled·using·the·median·of·a·subwindow.·If·‘minimum’,·the·subwindow··minimum·value·is·used.·If·‘no’,·no·background·subtraction·is·done.··(str;·default:·‘median’)·[default=”median”].</p> | ||
| 216 | </dd></dl> | ||
| 217 | <dl·class="attribute"> | ||
| 218 | <dt·id="uves_cal_mkmaster.param.backsub.npoints"> | ||
| 219 | <code·class="descclassname">uves_cal_mkmaster.param.backsub.</code><code·class="descname">npoints</code><a·class="headerlink"·href="#uves_cal_mkmaster.param.backsub.npoints"·title="Permalink·to·this·definition">¶</a></dt> | ||
| 220 | <dd><p>This·is·the·number·of·columns·in·interorder·space·used·to·sample·the··background.·(int;·default:·82)·[default=82].</p> | ||
| 221 | </dd></dl> | ||
| 222 | <dl·class="attribute"> | ||
| 223 | <dt·id="uves_cal_mkmaster.param.backsub.radiusy"> | ||
| 224 | <code·class="descclassname">uves_cal_mkmaster.param.backsub.</code><code·class="descname">radiusy</code><a·class="headerlink"·href="#uves_cal_mkmaster.param.backsub.radiusy"·title="Permalink·to·this·definition">¶</a></dt> | ||
| 225 | <dd><p>The·height·(in·pixels)·of·the·background·sampling·window·is·(2*radiusy··+·1).·This·parameter·is·not·corrected·for·binning.·(int;·default:·2)·[default=2].</p> | ||
| 226 | </dd></dl> | ||
| 227 | <dl·class="attribute"> | ||
| 228 | <dt·id="uves_cal_mkmaster.param.backsub.sdegree"> | ||
| 229 | <code·class="descclassname">uves_cal_mkmaster.param.backsub.</code><code·class="descname">sdegree</code><a·class="headerlink"·href="#uves_cal_mkmaster.param.backsub.sdegree"·title="Permalink·to·this·definition">¶</a></dt> | ||
| 230 | <dd><p>Degree·of·interpolating·splines.·Currently·only·degree·=·1·is··supported·(int;·default:·1)·[default=1].</p> | ||
| 231 | </dd></dl> | ||
| 232 | <dl·class="attribute"> | ||
| 233 | <dt·id="uves_cal_mkmaster.param.backsub.smoothx"> | ||
| 234 | <code·class="descclassname">uves_cal_mkmaster.param.backsub.</code><code·class="descname">smoothx</code><a·class="headerlink"·href="#uves_cal_mkmaster.param.backsub.smoothx"·title="Permalink·to·this·definition">¶</a></dt> | ||
| 235 | <dd><p>If·spline·interpolation·is·used·to·measure·the·background,·the··x-radius·of·the·post-smoothing·window·is·(smoothx·*·image_width).··Here,·‘image_width’·is·the·image·width·after·binning.·If·negative,·the··default·values·are·used:·(25.0/4096)·for·blue·flat-field·frames,··(50.0/4096)·for·red·flat-field·frames,·(300.0/4096)·for·blue·science··frames·and·(300.0/4096)·for·red·science·frames.·(float;·default:·-1.0)·[default=-1.0].</p> | ||
| 236 | </dd></dl> | ||
| 237 | <dl·class="attribute"> | ||
| 238 | <dt·id="uves_cal_mkmaster.param.backsub.smoothy"> | ||
| 239 | <code·class="descclassname">uves_cal_mkmaster.param.backsub.</code><code·class="descname">smoothy</code><a·class="headerlink"·href="#uves_cal_mkmaster.param.backsub.smoothy"·title="Permalink·to·this·definition">¶</a></dt> | ||
| 240 | <dd><p>If·spline·interpolation·is·used·to·measure·the·background,·the··y-radius·of·the·post-smoothing·window·is·(smoothy·*·image_height).··Here,·‘image_height’·is·the·image·height·after·binning.·If·negative,··the·default·values·are·used:·(100.0/2048)·for·blue·flat-field·frames,··(300.0/2048)·for·red·flat-field·frames,·(200.0/2048)·for·blue·science··frames·and·(500.0/2048)·for·red·science·frames.·(float;·default:·-1.0)·[default=-1.0].</p> | ||
| 241 | </dd></dl> | ||
| 242 | <dl·class="attribute"> | ||
| 213 | <dt·id="uves_cal_mkmaster.param.qc_dark.reg.num_x"> | 243 | <dt·id="uves_cal_mkmaster.param.qc_dark.reg.num_x"> |
| 214 | <code·class="descclassname">uves_cal_mkmaster.param.qc_dark.reg.</code><code·class="descname">num_x</code><a·class="headerlink"·href="#uves_cal_mkmaster.param.qc_dark.reg.num_x"·title="Permalink·to·this·definition">¶</a></dt> | 244 | <code·class="descclassname">uves_cal_mkmaster.param.qc_dark.reg.</code><code·class="descname">num_x</code><a·class="headerlink"·href="#uves_cal_mkmaster.param.qc_dark.reg.num_x"·title="Permalink·to·this·definition">¶</a></dt> |
| 215 | <dd><p>Number·of·regions·along·the·X·axis·(where·mean/med/rms·are·computed).··(int;·default:·4)·[default=4].</p> | 245 | <dd><p>Number·of·regions·along·the·X·axis·(where·mean/med/rms·are·computed).··(int;·default:·4)·[default=4].</p> |
| 216 | </dd></dl> | 246 | </dd></dl> |
| 217 | <dl·class="attribute"> | 247 | <dl·class="attribute"> |
| 218 | <dt·id="uves_cal_mkmaster.param.qc_dark.reg.num_y"> | 248 | <dt·id="uves_cal_mkmaster.param.qc_dark.reg.num_y"> |
| Offset 248, 50 lines modified | Offset 284, 14 lines modified | ||
| 248 | <dl·class="attribute"> | 284 | <dl·class="attribute"> |
| 249 | <dt·id="uves_cal_mkmaster.param.qc_dark.reg.when"> | 285 | <dt·id="uves_cal_mkmaster.param.qc_dark.reg.when"> |
| 250 | <code·class="descclassname">uves_cal_mkmaster.param.qc_dark.reg.</code><code·class="descname">when</code><a·class="headerlink"·href="#uves_cal_mkmaster.param.qc_dark.reg.when"·title="Permalink·to·this·definition">¶</a></dt> | 286 | <code·class="descclassname">uves_cal_mkmaster.param.qc_dark.reg.</code><code·class="descname">when</code><a·class="headerlink"·href="#uves_cal_mkmaster.param.qc_dark.reg.when"·title="Permalink·to·this·definition">¶</a></dt> |
| 251 | <dd><p>When·QC·analysis·is·performed.·0:·on·each·raw·frame·or·1:·on·the··master·frame·(int;·default:·0)·[default=0].</p> | 287 | <dd><p>When·QC·analysis·is·performed.·0:·on·each·raw·frame·or·1:·on·the··master·frame·(int;·default:·0)·[default=0].</p> |
| 252 | </dd></dl> | 288 | </dd></dl> |
| 253 | <dl·class="attribute"> | ||
| 254 | <dt·id="uves_cal_mkmaster.param.backsub.mmethod"> | ||
| 255 | <code·class="descclassname">uves_cal_mkmaster.param.backsub.</code><code·class="descname">mmethod</code><a·class="headerlink"·href="#uves_cal_mkmaster.param.backsub.mmethod"·title="Permalink·to·this·definition">¶</a></dt> | ||
| 256 | <dd><p>Background·measuring·method.·If·equal·to·‘median’·the·background·is··sampled·using·the·median·of·a·subwindow.·If·‘minimum’,·the·subwindow··minimum·value·is·used.·If·‘no’,·no·background·subtraction·is·done.··(str;·default:·‘median’)·[default=”median”].</p> | ||
| 257 | </dd></dl> | ||
| 258 | <dl·class="attribute"> | ||
| 259 | <dt·id="uves_cal_mkmaster.param.backsub.npoints"> | ||
| 260 | <code·class="descclassname">uves_cal_mkmaster.param.backsub.</code><code·class="descname">npoints</code><a·class="headerlink"·href="#uves_cal_mkmaster.param.backsub.npoints"·title="Permalink·to·this·definition">¶</a></dt> | ||
| 261 | <dd><p>This·is·the·number·of·columns·in·interorder·space·used·to·sample·the··background.·(int;·default:·82)·[default=82].</p> | ||
| 262 | </dd></dl> | ||
| 263 | <dl·class="attribute"> | ||
| 264 | <dt·id="uves_cal_mkmaster.param.backsub.radiusy"> | ||
| 265 | <code·class="descclassname">uves_cal_mkmaster.param.backsub.</code><code·class="descname">radiusy</code><a·class="headerlink"·href="#uves_cal_mkmaster.param.backsub.radiusy"·title="Permalink·to·this·definition">¶</a></dt> | ||
| 266 | <dd><p>The·height·(in·pixels)·of·the·background·sampling·window·is·(2*radiusy··+·1).·This·parameter·is·not·corrected·for·binning.·(int;·default:·2)·[default=2].</p> | ||
| 267 | </dd></dl> | ||
| 268 | <dl·class="attribute"> | ||
| 269 | <dt·id="uves_cal_mkmaster.param.backsub.sdegree"> | ||
| 270 | <code·class="descclassname">uves_cal_mkmaster.param.backsub.</code><code·class="descname">sdegree</code><a·class="headerlink"·href="#uves_cal_mkmaster.param.backsub.sdegree"·title="Permalink·to·this·definition">¶</a></dt> | ||
| 271 | <dd><p>Degree·of·interpolating·splines.·Currently·only·degree·=·1·is··supported·(int;·default:·1)·[default=1].</p> | ||
| 272 | </dd></dl> | ||
| 273 | <dl·class="attribute"> | ||
| 274 | <dt·id="uves_cal_mkmaster.param.backsub.smoothx"> | ||
| 275 | <code·class="descclassname">uves_cal_mkmaster.param.backsub.</code><code·class="descname">smoothx</code><a·class="headerlink"·href="#uves_cal_mkmaster.param.backsub.smoothx"·title="Permalink·to·this·definition">¶</a></dt> | ||
| 276 | <dd><p>If·spline·interpolation·is·used·to·measure·the·background,·the··x-radius·of·the·post-smoothing·window·is·(smoothx·*·image_width).··Here,·‘image_width’·is·the·image·width·after·binning.·If·negative,·the··default·values·are·used:·(25.0/4096)·for·blue·flat-field·frames,··(50.0/4096)·for·red·flat-field·frames,·(300.0/4096)·for·blue·science··frames·and·(300.0/4096)·for·red·science·frames.·(float;·default:·-1.0)·[default=-1.0].</p> | ||
| 277 | </dd></dl> | ||
| 278 | <dl·class="attribute"> | ||
| 279 | <dt·id="uves_cal_mkmaster.param.backsub.smoothy"> | ||
| 280 | <code·class="descclassname">uves_cal_mkmaster.param.backsub.</code><code·class="descname">smoothy</code><a·class="headerlink"·href="#uves_cal_mkmaster.param.backsub.smoothy"·title="Permalink·to·this·definition">¶</a></dt> | ||
| 281 | <dd><p>If·spline·interpolation·is·used·to·measure·the·background,·the··y-radius·of·the·post-smoothing·window·is·(smoothy·*·image_height).··Here,·‘image_height’·is·the·image·height·after·binning.·If·negative,··the·default·values·are·used:·(100.0/2048)·for·blue·flat-field·frames,··(300.0/2048)·for·red·flat-field·frames,·(200.0/2048)·for·blue·science··frames·and·(500.0/2048)·for·red·science·frames.·(float;·default:·-1.0)·[default=-1.0].</p> | ||
| 282 | </dd></dl> | ||
| 283 | <p>The·following·code·snippet·shows·the·default·settings·for·the·available | 289 | <p>The·following·code·snippet·shows·the·default·settings·for·the·available |
| 284 | parameters.</p> | 290 | parameters.</p> |
| 285 | <div·class="highlight-default·notranslate"><div·class="highlight"><pre><span></span><span·class="kn">import</span>·<span·class="nn">cpl</span> | 291 | <div·class="highlight-default·notranslate"><div·class="highlight"><pre><span></span><span·class="kn">import</span>·<span·class="nn">cpl</span> |
| 286 | <span·class="n">uves_cal_mkmaster</span>·<span·class="o">=</span>·<span·class="n">cpl</span><span·class="o">.</span><span·class="n">Recipe</span><span·class="p">(</span><span·class="s2">"uves_cal_mkmaster"</span><span·class="p">)</span> | 292 | <span·class="n">uves_cal_mkmaster</span>·<span·class="o">=</span>·<span·class="n">cpl</span><span·class="o">.</span><span·class="n">Recipe</span><span·class="p">(</span><span·class="s2">"uves_cal_mkmaster"</span><span·class="p">)</span> |
| 287 | <span·class="n">uves_cal_mkmaster</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">stack_method</span>·<span·class="o">=</span>·<span·class="s2">"median"</span> | 293 | <span·class="n">uves_cal_mkmaster</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">stack_method</span>·<span·class="o">=</span>·<span·class="s2">"median"</span> |
| 288 | <span·class="n">uves_cal_mkmaster</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">klow</span>·<span·class="o">=</span>·<span·class="mf">5.0</span> | 294 | <span·class="n">uves_cal_mkmaster</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">klow</span>·<span·class="o">=</span>·<span·class="mf">5.0</span> |
| Offset 305, 27 lines modified | Offset 305, 27 lines modified | ||
| 305 | <span·class="n">uves_cal_mkmaster</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">khigh</span>·<span·class="o">=</span>·<span·class="mf">5.0</span> | 305 | <span·class="n">uves_cal_mkmaster</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">khigh</span>·<span·class="o">=</span>·<span·class="mf">5.0</span> |
| 306 | <span·class="n">uves_cal_mkmaster</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">niter</span>·<span·class="o">=</span>·<span·class="mi">5</span> | 306 | <span·class="n">uves_cal_mkmaster</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">niter</span>·<span·class="o">=</span>·<span·class="mi">5</span> |
| 307 | <span·class="n">uves_cal_mkmaster</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">debug</span>·<span·class="o">=</span>·<span·class="kc">False</span> | 307 | <span·class="n">uves_cal_mkmaster</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">debug</span>·<span·class="o">=</span>·<span·class="kc">False</span> |
| 308 | <span·class="n">uves_cal_mkmaster</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">plotter</span>·<span·class="o">=</span>·<span·class="s2">"no"</span> | 308 | <span·class="n">uves_cal_mkmaster</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">plotter</span>·<span·class="o">=</span>·<span·class="s2">"no"</span> |
| 309 | <span·class="n">uves_cal_mkmaster</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">process_chip</span>·<span·class="o">=</span>·<span·class="s2">"both"</span> | 309 | <span·class="n">uves_cal_mkmaster</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">process_chip</span>·<span·class="o">=</span>·<span·class="s2">"both"</span> |
| 310 | <span·class="n">uves_cal_mkmaster</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">clean_traps</span>·<span·class="o">=</span>·<span·class="kc">False</span> | 310 | <span·class="n">uves_cal_mkmaster</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">clean_traps</span>·<span·class="o">=</span>·<span·class="kc">False</span> |
| 311 | <span·class="n">uves_cal_mkmaster</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">norm_method</span>·<span·class="o">=</span>·<span·class="s2">"explevel"</span> | 311 | <span·class="n">uves_cal_mkmaster</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">norm_method</span>·<span·class="o">=</span>·<span·class="s2">"explevel"</span> |
| 312 | <span·class="n">uves_cal_mkmaster</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">backsub</span><span·class="o">.</span><span·class="n">mmethod</span>·<span·class="o">=</span>·<span·class="s2">"median"</span> | ||
| 313 | <span·class="n">uves_cal_mkmaster</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">backsub</span><span·class="o">.</span><span·class="n">npoints</span>·<span·class="o">=</span>·<span·class="mi">82</span> | ||
| 314 | <span·class="n">uves_cal_mkmaster</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">backsub</span><span·class="o">.</span><span·class="n">radiusy</span>·<span·class="o">=</span>·<span·class="mi">2</span> | ||
| 315 | <span·class="n">uves_cal_mkmaster</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">backsub</span><span·class="o">.</span><span·class="n">sdegree</span>·<span·class="o">=</span>·<span·class="mi">1</span> | ||
| 316 | <span·class="n">uves_cal_mkmaster</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">backsub</span><span·class="o">.</span><span·class="n">smoothx</span>·<span·class="o">=</span>·<span·class="o">-</span><span·class="mf">1.0</span> | ||
| 317 | <span·class="n">uves_cal_mkmaster</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">backsub</span><span·class="o">.</span><span·class="n">smoothy</span>·<span·class="o">=</span>·<span·class="o">-</span><span·class="mf">1.0</span> | ||
| 312 | <span·class="n">uves_cal_mkmaster</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">qc_dark</span><span·class="o">.</span><span·class="n">reg</span><span·class="o">.</span><span·class="n">num_x</span>·<span·class="o">=</span>·<span·class="mi">4</span> | 318 | <span·class="n">uves_cal_mkmaster</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">qc_dark</span><span·class="o">.</span><span·class="n">reg</span><span·class="o">.</span><span·class="n">num_x</span>·<span·class="o">=</span>·<span·class="mi">4</span> |
| 313 | <span·class="n">uves_cal_mkmaster</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">qc_dark</span><span·class="o">.</span><span·class="n">reg</span><span·class="o">.</span><span·class="n">num_y</span>·<span·class="o">=</span>·<span·class="mi">4</span> | 319 | <span·class="n">uves_cal_mkmaster</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">qc_dark</span><span·class="o">.</span><span·class="n">reg</span><span·class="o">.</span><span·class="n">num_y</span>·<span·class="o">=</span>·<span·class="mi">4</span> |
| 314 | <span·class="n">uves_cal_mkmaster</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">qc_dark</span><span·class="o">.</span><span·class="n">reg</span><span·class="o">.</span><span·class="n">box_sx</span>·<span·class="o">=</span>·<span·class="mi">100</span> | 320 | <span·class="n">uves_cal_mkmaster</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">qc_dark</span><span·class="o">.</span><span·class="n">reg</span><span·class="o">.</span><span·class="n">box_sx</span>·<span·class="o">=</span>·<span·class="mi">100</span> |
| 315 | <span·class="n">uves_cal_mkmaster</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">qc_dark</span><span·class="o">.</span><span·class="n">reg</span><span·class="o">.</span><span·class="n">box_sy</span>·<span·class="o">=</span>·<span·class="mi">100</span> | 321 | <span·class="n">uves_cal_mkmaster</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">qc_dark</span><span·class="o">.</span><span·class="n">reg</span><span·class="o">.</span><span·class="n">box_sy</span>·<span·class="o">=</span>·<span·class="mi">100</span> |
| 316 | <span·class="n">uves_cal_mkmaster</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">qc_dark</span><span·class="o">.</span><span·class="n">reg</span><span·class="o">.</span><span·class="n">border_x</span>·<span·class="o">=</span>·<span·class="mi">100</span> | 322 | <span·class="n">uves_cal_mkmaster</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">qc_dark</span><span·class="o">.</span><span·class="n">reg</span><span·class="o">.</span><span·class="n">border_x</span>·<span·class="o">=</span>·<span·class="mi">100</span> |
| 317 | <span·class="n">uves_cal_mkmaster</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">qc_dark</span><span·class="o">.</span><span·class="n">reg</span><span·class="o">.</span><span·class="n">border_y</span>·<span·class="o">=</span>·<span·class="mi">100</span> | 323 | <span·class="n">uves_cal_mkmaster</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">qc_dark</span><span·class="o">.</span><span·class="n">reg</span><span·class="o">.</span><span·class="n">border_y</span>·<span·class="o">=</span>·<span·class="mi">100</span> |
| 318 | <span·class="n">uves_cal_mkmaster</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">qc_dark</span><span·class="o">.</span><span·class="n">reg</span><span·class="o">.</span><span·class="n">when</span>·<span·class="o">=</span>·<span·class="mi">0</span> | 324 | <span·class="n">uves_cal_mkmaster</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">qc_dark</span><span·class="o">.</span><span·class="n">reg</span><span·class="o">.</span><span·class="n">when</span>·<span·class="o">=</span>·<span·class="mi">0</span> |
| 319 | <span·class="n">uves_cal_mkmaster</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">backsub</span><span·class="o">.</span><span·class="n">mmethod</span>·<span·class="o">=</span>·<span·class="s2">"median"</span> | ||
| 320 | <span·class="n">uves_cal_mkmaster</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">backsub</span><span·class="o">.</span><span·class="n">npoints</span>·<span·class="o">=</span>·<span·class="mi">82</span> | ||
| 321 | <span·class="n">uves_cal_mkmaster</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">backsub</span><span·class="o">.</span><span·class="n">radiusy</span>·<span·class="o">=</span>·<span·class="mi">2</span> | ||
| 322 | <span·class="n">uves_cal_mkmaster</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">backsub</span><span·class="o">.</span><span·class="n">sdegree</span>·<span·class="o">=</span>·<span·class="mi">1</span> | ||
| 323 | <span·class="n">uves_cal_mkmaster</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">backsub</span><span·class="o">.</span><span·class="n">smoothx</span>·<span·class="o">=</span>·<span·class="o">-</span><span·class="mf">1.0</span> | ||
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| 168 | <dl·class="attribute"> | 168 | <dl·class="attribute"> |
| 169 | <dt·id="uves_cal_response.param.paccuracy"> | 169 | <dt·id="uves_cal_response.param.paccuracy"> |
| 170 | <code·class="descclassname">uves_cal_response.param.</code><code·class="descname">paccuracy</code><a·class="headerlink"·href="#uves_cal_response.param.paccuracy"·title="Permalink·to·this·definition">¶</a></dt> | 170 | <code·class="descclassname">uves_cal_response.param.</code><code·class="descname">paccuracy</code><a·class="headerlink"·href="#uves_cal_response.param.paccuracy"·title="Permalink·to·this·definition">¶</a></dt> |
| 171 | <dd><p>The·pointing·accuracy·(in·arcseconds)·used·to·identify·the·observed··star·with·a·catalogue·star.·If·the·angular·separation·is·less·than··this·number,·the·identification·is·made.·(float;·default:·60.0)·[default=60.0].</p> | 171 | <dd><p>The·pointing·accuracy·(in·arcseconds)·used·to·identify·the·observed··star·with·a·catalogue·star.·If·the·angular·separation·is·less·than··this·number,·the·identification·is·made.·(float;·default:·60.0)·[default=60.0].</p> |
| 172 | </dd></dl> | 172 | </dd></dl> |
| 173 | <dl·class="attribute"> | 173 | <dl·class="attribute"> |
| 174 | <dt·id="uves_cal_response.param.efficiency.reduce.ffmethod"> | ||
| 175 | <code·class="descclassname">uves_cal_response.param.efficiency.reduce.</code><code·class="descname">ffmethod</code><a·class="headerlink"·href="#uves_cal_response.param.efficiency.reduce.ffmethod"·title="Permalink·to·this·definition">¶</a></dt> | ||
| 176 | <dd><p>Flat-fielding·method.·If·set·to·‘pixel’,·flat-fielding·is·done·in··pixel-pixel·space·(before·extraction);·if·set·to·‘extract’,·flat-··fielding·is·performed·in·pixel-order·space·(i.e.·after·extraction).·If··set·to·‘no’,·no·flat-field·correction·is·done.·<pixel·|·extract·|·no>··(str;·default:·‘no’)·[default=”no”].</p> | ||
| 177 | </dd></dl> | ||
| 178 | <dl·class="attribute"> | ||
| 179 | <dt·id="uves_cal_response.param.efficiency.reduce.merge"> | ||
| 180 | <code·class="descclassname">uves_cal_response.param.efficiency.reduce.</code><code·class="descname">merge</code><a·class="headerlink"·href="#uves_cal_response.param.efficiency.reduce.merge"·title="Permalink·to·this·definition">¶</a></dt> | ||
| 181 | <dd><p>Order·merging·method.·If·‘optimal’,·the·flux·in·the·overlapping·region··is·set·to·the·(optimally·computed,·using·the·uncertainties)·average·of··single·order·spectra.·If·‘sum’,·the·flux·in·the·overlapping·region·is··computed·as·the·sum·of·the·single·order·spectra.If·‘noappend’·the··spectrum·is·simply·rebinned·but·not·merged.If·flat-fielding·is·done,··method·‘optimal’·is·recommended,·otherwise·‘sum’.·<optimal·|·sum·|··noappend>·(str;·default:·‘sum’)·[default=”sum”].</p> | ||
| 182 | </dd></dl> | ||
| 183 | <dl·class="attribute"> | ||
| 184 | <dt·id="uves_cal_response.param.efficiency.reduce.best"> | ||
| 185 | <code·class="descclassname">uves_cal_response.param.efficiency.reduce.</code><code·class="descname">best</code><a·class="headerlink"·href="#uves_cal_response.param.efficiency.reduce.best"·title="Permalink·to·this·definition">¶</a></dt> | ||
| 186 | <dd><p>(optimal·extraction·only)·If·false·(fastest),·the·spectrum·is··extracted·only·once.·If·true·(best),·the·spectrum·is·extracted·twice,··the·second·time·using·improved·variance·estimates·based·on·the·first··iteration.·Better·variance·estimates·slightly·improve·the·obtained··signal·to·noise·but·at·the·cost·of·increased·execution·time·(bool;··default:·True)·[default=True].</p> | ||
| 187 | </dd></dl> | ||
| 188 | <dl·class="attribute"> | ||
| 189 | <dt·id="uves_cal_response.param.efficiency.reduce.extract.method"> | ||
| 190 | <code·class="descclassname">uves_cal_response.param.efficiency.reduce.extract.</code><code·class="descname">method</code><a·class="headerlink"·href="#uves_cal_response.param.efficiency.reduce.extract.method"·title="Permalink·to·this·definition">¶</a></dt> | ||
| 191 | <dd><p>Extraction·method.·<average·|·linear·|·weighted·|·optimal>·(str;··default:·‘linear’)·[default=”linear”].</p> | ||
| 192 | </dd></dl> | ||
| 193 | <dl·class="attribute"> | ||
| 194 | <dt·id="uves_cal_response.param.reduce.slitlength"> | 174 | <dt·id="uves_cal_response.param.reduce.slitlength"> |
| 195 | <code·class="descclassname">uves_cal_response.param.reduce.</code><code·class="descname">slitlength</code><a·class="headerlink"·href="#uves_cal_response.param.reduce.slitlength"·title="Permalink·to·this·definition">¶</a></dt> | 175 | <code·class="descclassname">uves_cal_response.param.reduce.</code><code·class="descname">slitlength</code><a·class="headerlink"·href="#uves_cal_response.param.reduce.slitlength"·title="Permalink·to·this·definition">¶</a></dt> |
| 196 | <dd><p>Extraction·slit·length·(in·pixels).·If·negative,·the·value·inferred··from·the·raw·frame·header·is·used·(float;·default:·-1.0)·[default=-1.0].</p> | 176 | <dd><p>Extraction·slit·length·(in·pixels).·If·negative,·the·value·inferred··from·the·raw·frame·header·is·used·(float;·default:·-1.0)·[default=-1.0].</p> |
| 197 | </dd></dl> | 177 | </dd></dl> |
| 198 | <dl·class="attribute"> | 178 | <dl·class="attribute"> |
| 199 | <dt·id="uves_cal_response.param.reduce.skysub"> | 179 | <dt·id="uves_cal_response.param.reduce.skysub"> |
| Offset 246, 14 lines modified | Offset 222, 56 lines modified | ||
| 246 | <dl·class="attribute"> | 222 | <dl·class="attribute"> |
| 247 | <dt·id="uves_cal_response.param.reduce.merge_delt2"> | 223 | <dt·id="uves_cal_response.param.reduce.merge_delt2"> |
| 248 | <code·class="descclassname">uves_cal_response.param.reduce.</code><code·class="descname">merge_delt2</code><a·class="headerlink"·href="#uves_cal_response.param.reduce.merge_delt2"·title="Permalink·to·this·definition">¶</a></dt> | 224 | <code·class="descclassname">uves_cal_response.param.reduce.</code><code·class="descname">merge_delt2</code><a·class="headerlink"·href="#uves_cal_response.param.reduce.merge_delt2"·title="Permalink·to·this·definition">¶</a></dt> |
| 249 | <dd><p>Order·merging·right·hand·(long·wavelength)·cut.·To·reduce·the·amount··of·order·overlapping·regions·we·allow·to·cut·short·and·long·wavelength··ranges.·This·may·reduce·the·ripple·possibly·introduced·by·the·order··merging.·Suggested·values·is·4·(float;·default:·0.0)·[default=0.0].</p> | 225 | <dd><p>Order·merging·right·hand·(long·wavelength)·cut.·To·reduce·the·amount··of·order·overlapping·regions·we·allow·to·cut·short·and·long·wavelength··ranges.·This·may·reduce·the·ripple·possibly·introduced·by·the·order··merging.·Suggested·values·is·4·(float;·default:·0.0)·[default=0.0].</p> |
| 250 | </dd></dl> | 226 | </dd></dl> |
| 251 | <dl·class="attribute"> | 227 | <dl·class="attribute"> |
| 228 | <dt·id="uves_cal_response.param.reduce.extract.method"> | ||
| 229 | <code·class="descclassname">uves_cal_response.param.reduce.extract.</code><code·class="descname">method</code><a·class="headerlink"·href="#uves_cal_response.param.reduce.extract.method"·title="Permalink·to·this·definition">¶</a></dt> | ||
| 230 | <dd><p>Extraction·method.·(2d/optimal·not·supported·by·uves_cal_wavecal,··weighted·supported·only·by·uves_cal_wavecal,·2d·not·supported·by··uves_cal_response)·(str;·default:·‘optimal’)·[default=”optimal”].</p> | ||
| 231 | </dd></dl> | ||
| 232 | <dl·class="attribute"> | ||
| 233 | <dt·id="uves_cal_response.param.reduce.extract.kappa"> | ||
| 234 | <code·class="descclassname">uves_cal_response.param.reduce.extract.</code><code·class="descname">kappa</code><a·class="headerlink"·href="#uves_cal_response.param.reduce.extract.kappa"·title="Permalink·to·this·definition">¶</a></dt> | ||
| 235 | <dd><p>In·optimal·extraction·mode,·this·is·the·threshold·for·bad·(i.e.··hot/cold)·pixel·rejection.·If·a·pixel·deviates·more·than·kappa*sigma··(where·sigma·is·the·uncertainty·of·the·pixel·flux)·from·the·inferred··spatial·profile,·its·weight·is·set·to·zero.·Range:·[-1,100].·If·this··parameter·is·negative,·no·rejection·is·performed.·(float;·default:··10.0)·[default=10.0].</p> | ||
| 236 | </dd></dl> | ||
| 237 | <dl·class="attribute"> | ||
| 238 | <dt·id="uves_cal_response.param.reduce.extract.chunk"> | ||
| 239 | <code·class="descclassname">uves_cal_response.param.reduce.extract.</code><code·class="descname">chunk</code><a·class="headerlink"·href="#uves_cal_response.param.reduce.extract.chunk"·title="Permalink·to·this·definition">¶</a></dt> | ||
| 240 | <dd><p>In·optimal·extraction·mode,·the·chunk·size·(in·pixels)·used·for··fitting·the·analytical·profile·(a·fit·of·the·analytical·profile·to··single·bins·would·suffer·from·low·statistics).·(int;·default:·32)·[default=32].</p> | ||
| 241 | </dd></dl> | ||
| 242 | <dl·class="attribute"> | ||
| 243 | <dt·id="uves_cal_response.param.reduce.extract.profile"> | ||
| 244 | <code·class="descclassname">uves_cal_response.param.reduce.extract.</code><code·class="descname">profile</code><a·class="headerlink"·href="#uves_cal_response.param.reduce.extract.profile"·title="Permalink·to·this·definition">¶</a></dt> | ||
| 245 | <dd><p>In·optimal·extraction·mode,·the·kind·of·profile·to·use.·‘gauss’·gives··a·Gaussian·profile,·‘moffat’·gives·a·Moffat·profile·with·beta=4·and·a··possible·linear·sky·contribution.·‘virtual’·uses·a·virtual·resampling··algorithm·(i.e.·measures·and·uses·the·actual·object·profile).··‘constant’·assumes·a·constant·spatial·profile·and·allows·optimal··extraction·of·wavelength·calibration·frames.·‘auto’·will·automatically··select·the·best·method·based·on·the·estimated·S/N·of·the·object.·For··low·S/N,·‘moffat’·or·‘gauss’·are·recommended·(for·robustness).·For··high·S/N,·‘virtual’·is·recommended·(for·accuracy).·In·the·case·of··virtual·resampling,·a·precise·determination·of·the·order·positions·is··required;·therefore·the·order-definition·is·repeated·using·the··(assumed·non-low·S/N)·science·frame·(str;·default:·‘auto’)·[default=”auto”].</p> | ||
| 246 | </dd></dl> | ||
| 247 | <dl·class="attribute"> | ||
| 248 | <dt·id="uves_cal_response.param.reduce.extract.skymethod"> | ||
| 249 | <code·class="descclassname">uves_cal_response.param.reduce.extract.</code><code·class="descname">skymethod</code><a·class="headerlink"·href="#uves_cal_response.param.reduce.extract.skymethod"·title="Permalink·to·this·definition">¶</a></dt> | ||
| 250 | <dd><p>In·optimal·extraction·mode,·the·sky·subtraction·method·to·use.··‘median’·estimates·the·sky·as·the·median·of·pixels·along·the·slit··(ignoring·pixels·close·to·the·object),·whereas·‘optimal’·does·a·chi··square·minimization·along·the·slit·to·obtain·the·best·combined·object··and·sky·levels.·The·optimal·method·gives·the·most·accurate·sky··determination·but·is·also·a·bit·slower·than·the·median·method·(str;··default:·‘optimal’)·[default=”optimal”].</p> | ||
| 251 | </dd></dl> | ||
| 252 | <dl·class="attribute"> | ||
| 253 | <dt·id="uves_cal_response.param.reduce.extract.oversample"> | ||
| 254 | <code·class="descclassname">uves_cal_response.param.reduce.extract.</code><code·class="descname">oversample</code><a·class="headerlink"·href="#uves_cal_response.param.reduce.extract.oversample"·title="Permalink·to·this·definition">¶</a></dt> | ||
| 255 | <dd><p>The·oversampling·factor·used·for·the·virtual·resampling·algorithm.·If··negative,·the·value·5·is·used·for·S/N·<=200,·and·the·value·10·is·used··if·the·estimated·S/N·is·>·200·(int;·default:·-1)·[default=-1].</p> | ||
| 256 | </dd></dl> | ||
| 257 | <dl·class="attribute"> | ||
| 258 | <dt·id="uves_cal_response.param.reduce.extract.best"> | ||
| 259 | <code·class="descclassname">uves_cal_response.param.reduce.extract.</code><code·class="descname">best</code><a·class="headerlink"·href="#uves_cal_response.param.reduce.extract.best"·title="Permalink·to·this·definition">¶</a></dt> | ||
| 260 | <dd><p>(optimal·extraction·only)·If·false·(fastest),·the·spectrum·is··extracted·only·once.·If·true·(best),·the·spectrum·is·extracted·twice,··the·second·time·using·improved·variance·estimates·based·on·the·first··iteration.·Better·variance·estimates·slightly·improve·the·obtained··signal·to·noise·but·at·the·cost·of·increased·execution·time·(bool;··default:·True)·[default=True].</p> | ||
| 261 | </dd></dl> | ||
| 262 | <dl·class="attribute"> | ||
| 252 | <dt·id="uves_cal_response.param.reduce.rebin.wavestep"> | 263 | <dt·id="uves_cal_response.param.reduce.rebin.wavestep"> |
| 253 | <code·class="descclassname">uves_cal_response.param.reduce.rebin.</code><code·class="descname">wavestep</code><a·class="headerlink"·href="#uves_cal_response.param.reduce.rebin.wavestep"·title="Permalink·to·this·definition">¶</a></dt> | 264 | <code·class="descclassname">uves_cal_response.param.reduce.rebin.</code><code·class="descname">wavestep</code><a·class="headerlink"·href="#uves_cal_response.param.reduce.rebin.wavestep"·title="Permalink·to·this·definition">¶</a></dt> |
| 254 | <dd><p>The·bin·size·(in·w.l.u.)·in·wavelength·space.·If·negative,·a·step·size··of·2/3·*·(·average·pixel·size·)·is·used.·(float;·default:·-1.0)·[default=-1.0].</p> | 265 | <dd><p>The·bin·size·(in·w.l.u.)·in·wavelength·space.·If·negative,·a·step·size··of·2/3·*·(·average·pixel·size·)·is·used.·(float;·default:·-1.0)·[default=-1.0].</p> |
| 255 | </dd></dl> | 266 | </dd></dl> |
| 256 | <dl·class="attribute"> | 267 | <dl·class="attribute"> |
| 257 | <dt·id="uves_cal_response.param.reduce.rebin.scale"> | 268 | <dt·id="uves_cal_response.param.reduce.rebin.scale"> |
| Offset 294, 92 lines modified | Offset 312, 74 lines modified | ||
| 294 | <dl·class="attribute"> | 312 | <dl·class="attribute"> |
| 295 | <dt·id="uves_cal_response.param.reduce.backsub.smoothy"> | 313 | <dt·id="uves_cal_response.param.reduce.backsub.smoothy"> |
| 296 | <code·class="descclassname">uves_cal_response.param.reduce.backsub.</code><code·class="descname">smoothy</code><a·class="headerlink"·href="#uves_cal_response.param.reduce.backsub.smoothy"·title="Permalink·to·this·definition">¶</a></dt> | 314 | <code·class="descclassname">uves_cal_response.param.reduce.backsub.</code><code·class="descname">smoothy</code><a·class="headerlink"·href="#uves_cal_response.param.reduce.backsub.smoothy"·title="Permalink·to·this·definition">¶</a></dt> |
| 297 | <dd><p>If·spline·interpolation·is·used·to·measure·the·background,·the··y-radius·of·the·post-smoothing·window·is·(smoothy·*·image_height).··Here,·‘image_height’·is·the·image·height·after·binning.·If·negative,··the·default·values·are·used:·(100.0/2048)·for·blue·flat-field·frames,··(300.0/2048)·for·red·flat-field·frames,·(200.0/2048)·for·blue·science··frames·and·(500.0/2048)·for·red·science·frames.·(float;·default:·-1.0)·[default=-1.0].</p> | 315 | <dd><p>If·spline·interpolation·is·used·to·measure·the·background,·the··y-radius·of·the·post-smoothing·window·is·(smoothy·*·image_height).··Here,·‘image_height’·is·the·image·height·after·binning.·If·negative,··the·default·values·are·used:·(100.0/2048)·for·blue·flat-field·frames,··(300.0/2048)·for·red·flat-field·frames,·(200.0/2048)·for·blue·science··frames·and·(500.0/2048)·for·red·science·frames.·(float;·default:·-1.0)·[default=-1.0].</p> |
| 298 | </dd></dl> | 316 | </dd></dl> |
| 299 | <dl·class="attribute"> | 317 | <dl·class="attribute"> |
| 300 | <dt·id="uves_cal_response.param. | 318 | <dt·id="uves_cal_response.param.efficiency.reduce.ffmethod"> |
| 319 | <code·class="descclassname">uves_cal_response.param.efficiency.reduce.</code><code·class="descname">ffmethod</code><a·class="headerlink"·href="#uves_cal_response.param.efficiency.reduce.ffmethod"·title="Permalink·to·this·definition">¶</a></dt> | ||
| 320 | <dd><p>Flat-fielding·method.·If·set·to·‘pixel’,·flat-fielding·is·done·in··pixel-pixel·space·(before·extraction);·if·set·to·‘extract’,·flat-··fielding·is·performed·in·pixel-order·space·(i.e.·after·extraction).·If··set·to·‘no’,·no·flat-field·correction·is·done.·<pixel·|·extract·|·no>··(str;·default:·‘no’)·[default=”no”].</p> | ||
| 301 | <code·class="descclassname">uves_cal_response.param.reduce.extract.</code><code·class="descname">method</code><a·class="headerlink"·href="#uves_cal_response.param.reduce.extract.method"·title="Permalink·to·this·definition">¶</a></dt> | ||
| 302 | <dd><p>Extraction·method.·(2d/optimal·not·supported·by·uves_cal_wavecal,··weighted·supported·only·by·uves_cal_wavecal,·2d·not·supported·by··uves_cal_response)·(str;·default:·‘optimal’)·[default=”optimal”].</p> | ||
| 303 | </dd></dl> | ||
| 304 | <dl·class="attribute"> | ||
| 305 | <dt·id="uves_cal_response.param.reduce.extract.kappa"> | ||
| 306 | <code·class="descclassname">uves_cal_response.param.reduce.extract.</code><code·class="descname">kappa</code><a·class="headerlink"·href="#uves_cal_response.param.reduce.extract.kappa"·title="Permalink·to·this·definition">¶</a></dt> | ||
| 307 | <dd><p>In·optimal·extraction·mode,·this·is·the·threshold·for·bad·(i.e.··hot/cold)·pixel·rejection.·If·a·pixel·deviates·more·than·kappa*sigma··(where·sigma·is·the·uncertainty·of·the·pixel·flux)·from·the·inferred··spatial·profile,·its·weight·is·set·to·zero.·Range:·[-1,100].·If·this··parameter·is·negative,·no·rejection·is·performed.·(float;·default:··10.0)·[default=10.0].</p> | ||
| 308 | </dd></dl> | ||
| 309 | <dl·class="attribute"> | ||
| 310 | <dt·id="uves_cal_response.param.reduce.extract.chunk"> | ||
| 311 | <code·class="descclassname">uves_cal_response.param.reduce.extract.</code><code·class="descname">chunk</code><a·class="headerlink"·href="#uves_cal_response.param.reduce.extract.chunk"·title="Permalink·to·this·definition">¶</a></dt> | ||
| 312 | <dd><p>In·optimal·extraction·mode,·the·chunk·size·(in·pixels)·used·for··fitting·the·analytical·profile·(a·fit·of·the·analytical·profile·to··single·bins·would·suffer·from·low·statistics).·(int;·default:·32)·[default=32].</p> | ||
| 313 | </dd></dl> | ||
| 314 | <dl·class="attribute"> | ||
| 315 | <dt·id="uves_cal_response.param.reduce.extract.profile"> | ||
| 316 | <code·class="descclassname">uves_cal_response.param.reduce.extract.</code><code·class="descname">profile</code><a·class="headerlink"·href="#uves_cal_response.param.reduce.extract.profile"·title="Permalink·to·this·definition">¶</a></dt> | ||
| 317 | <dd><p>In·optimal·extraction·mode,·the·kind·of·profile·to·use.·‘gauss’·gives··a·Gaussian·profile,·‘moffat’·gives·a·Moffat·profile·with·beta=4·and·a··possible·linear·sky·contribution.·‘virtual’·uses·a·virtual·resampling··algorithm·(i.e.·measures·and·uses·the·actual·object·profile).··‘constant’·assumes·a·constant·spatial·profile·and·allows·optimal··extraction·of·wavelength·calibration·frames.·‘auto’·will·automatically··select·the·best·method·based·on·the·estimated·S/N·of·the·object.·For··low·S/N,·‘moffat’·or·‘gauss’·are·recommended·(for·robustness).·For··high·S/N,·‘virtual’·is·recommended·(for·accuracy).·In·the·case·of··virtual·resampling,·a·precise·determination·of·the·order·positions·is··required;·therefore·the·order-definition·is·repeated·using·the··(assumed·non-low·S/N)·science·frame·(str;·default:·‘auto’)·[default=”auto”].</p> | ||
| 318 | </dd></dl> | 321 | </dd></dl> |
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| 236 | <dl·class="attribute"> | 236 | <dl·class="attribute"> |
| 237 | <dt·id="uves_cal_tflat.param.reduce.merge_delt2"> | 237 | <dt·id="uves_cal_tflat.param.reduce.merge_delt2"> |
| 238 | <code·class="descclassname">uves_cal_tflat.param.reduce.</code><code·class="descname">merge_delt2</code><a·class="headerlink"·href="#uves_cal_tflat.param.reduce.merge_delt2"·title="Permalink·to·this·definition">¶</a></dt> | 238 | <code·class="descclassname">uves_cal_tflat.param.reduce.</code><code·class="descname">merge_delt2</code><a·class="headerlink"·href="#uves_cal_tflat.param.reduce.merge_delt2"·title="Permalink·to·this·definition">¶</a></dt> |
| 239 | <dd><p>Order·merging·right·hand·(long·wavelength)·cut.·To·reduce·the·amount··of·order·overlapping·regions·we·allow·to·cut·short·and·long·wavelength··ranges.·This·may·reduce·the·ripple·possibly·introduced·by·the·order··merging.·Suggested·values·is·4·(float;·default:·0.0)·[default=0.0].</p> | 239 | <dd><p>Order·merging·right·hand·(long·wavelength)·cut.·To·reduce·the·amount··of·order·overlapping·regions·we·allow·to·cut·short·and·long·wavelength··ranges.·This·may·reduce·the·ripple·possibly·introduced·by·the·order··merging.·Suggested·values·is·4·(float;·default:·0.0)·[default=0.0].</p> |
| 240 | </dd></dl> | 240 | </dd></dl> |
| 241 | <dl·class="attribute"> | 241 | <dl·class="attribute"> |
| 242 | <dt·id="uves_cal_tflat.param.reduce.extract.method"> | ||
| 243 | <code·class="descclassname">uves_cal_tflat.param.reduce.extract.</code><code·class="descname">method</code><a·class="headerlink"·href="#uves_cal_tflat.param.reduce.extract.method"·title="Permalink·to·this·definition">¶</a></dt> | ||
| 244 | <dd><p>Extraction·method.·(2d/optimal·not·supported·by·uves_cal_wavecal,··weighted·supported·only·by·uves_cal_wavecal,·2d·not·supported·by··uves_cal_response)·(str;·default:·‘average’)·[default=”average”].</p> | ||
| 245 | </dd></dl> | ||
| 246 | <dl·class="attribute"> | ||
| 247 | <dt·id="uves_cal_tflat.param.reduce.extract.kappa"> | ||
| 248 | <code·class="descclassname">uves_cal_tflat.param.reduce.extract.</code><code·class="descname">kappa</code><a·class="headerlink"·href="#uves_cal_tflat.param.reduce.extract.kappa"·title="Permalink·to·this·definition">¶</a></dt> | ||
| 249 | <dd><p>In·optimal·extraction·mode,·this·is·the·threshold·for·bad·(i.e.··hot/cold)·pixel·rejection.·If·a·pixel·deviates·more·than·kappa*sigma··(where·sigma·is·the·uncertainty·of·the·pixel·flux)·from·the·inferred··spatial·profile,·its·weight·is·set·to·zero.·Range:·[-1,100].·If·this··parameter·is·negative,·no·rejection·is·performed.·(float;·default:··10.0)·[default=10.0].</p> | ||
| 250 | </dd></dl> | ||
| 251 | <dl·class="attribute"> | ||
| 252 | <dt·id="uves_cal_tflat.param.reduce.extract.chunk"> | ||
| 253 | <code·class="descclassname">uves_cal_tflat.param.reduce.extract.</code><code·class="descname">chunk</code><a·class="headerlink"·href="#uves_cal_tflat.param.reduce.extract.chunk"·title="Permalink·to·this·definition">¶</a></dt> | ||
| 254 | <dd><p>In·optimal·extraction·mode,·the·chunk·size·(in·pixels)·used·for··fitting·the·analytical·profile·(a·fit·of·the·analytical·profile·to··single·bins·would·suffer·from·low·statistics).·(int;·default:·32)·[default=32].</p> | ||
| 255 | </dd></dl> | ||
| 256 | <dl·class="attribute"> | ||
| 257 | <dt·id="uves_cal_tflat.param.reduce.extract.profile"> | ||
| 258 | <code·class="descclassname">uves_cal_tflat.param.reduce.extract.</code><code·class="descname">profile</code><a·class="headerlink"·href="#uves_cal_tflat.param.reduce.extract.profile"·title="Permalink·to·this·definition">¶</a></dt> | ||
| 259 | <dd><p>In·optimal·extraction·mode,·the·kind·of·profile·to·use.·‘gauss’·gives··a·Gaussian·profile,·‘moffat’·gives·a·Moffat·profile·with·beta=4·and·a··possible·linear·sky·contribution.·‘virtual’·uses·a·virtual·resampling··algorithm·(i.e.·measures·and·uses·the·actual·object·profile).··‘constant’·assumes·a·constant·spatial·profile·and·allows·optimal··extraction·of·wavelength·calibration·frames.·‘auto’·will·automatically··select·the·best·method·based·on·the·estimated·S/N·of·the·object.·For··low·S/N,·‘moffat’·or·‘gauss’·are·recommended·(for·robustness).·For··high·S/N,·‘virtual’·is·recommended·(for·accuracy).·In·the·case·of··virtual·resampling,·a·precise·determination·of·the·order·positions·is··required;·therefore·the·order-definition·is·repeated·using·the··(assumed·non-low·S/N)·science·frame·(str;·default:·‘auto’)·[default=”auto”].</p> | ||
| 260 | </dd></dl> | ||
| 261 | <dl·class="attribute"> | ||
| 262 | <dt·id="uves_cal_tflat.param.reduce.extract.skymethod"> | ||
| 263 | <code·class="descclassname">uves_cal_tflat.param.reduce.extract.</code><code·class="descname">skymethod</code><a·class="headerlink"·href="#uves_cal_tflat.param.reduce.extract.skymethod"·title="Permalink·to·this·definition">¶</a></dt> | ||
| 264 | <dd><p>In·optimal·extraction·mode,·the·sky·subtraction·method·to·use.··‘median’·estimates·the·sky·as·the·median·of·pixels·along·the·slit··(ignoring·pixels·close·to·the·object),·whereas·‘optimal’·does·a·chi··square·minimization·along·the·slit·to·obtain·the·best·combined·object··and·sky·levels.·The·optimal·method·gives·the·most·accurate·sky··determination·but·is·also·a·bit·slower·than·the·median·method·(str;··default:·‘optimal’)·[default=”optimal”].</p> | ||
| 265 | </dd></dl> | ||
| 266 | <dl·class="attribute"> | ||
| 267 | <dt·id="uves_cal_tflat.param.reduce.extract.oversample"> | ||
| 268 | <code·class="descclassname">uves_cal_tflat.param.reduce.extract.</code><code·class="descname">oversample</code><a·class="headerlink"·href="#uves_cal_tflat.param.reduce.extract.oversample"·title="Permalink·to·this·definition">¶</a></dt> | ||
| 269 | <dd><p>The·oversampling·factor·used·for·the·virtual·resampling·algorithm.·If··negative,·the·value·5·is·used·for·S/N·<=200,·and·the·value·10·is·used··if·the·estimated·S/N·is·>·200·(int;·default:·-1)·[default=-1].</p> | ||
| 270 | </dd></dl> | ||
| 271 | <dl·class="attribute"> | ||
| 272 | <dt·id="uves_cal_tflat.param.reduce.extract.best"> | ||
| 273 | <code·class="descclassname">uves_cal_tflat.param.reduce.extract.</code><code·class="descname">best</code><a·class="headerlink"·href="#uves_cal_tflat.param.reduce.extract.best"·title="Permalink·to·this·definition">¶</a></dt> | ||
| 274 | <dd><p>(optimal·extraction·only)·If·false·(fastest),·the·spectrum·is··extracted·only·once.·If·true·(best),·the·spectrum·is·extracted·twice,··the·second·time·using·improved·variance·estimates·based·on·the·first··iteration.·Better·variance·estimates·slightly·improve·the·obtained··signal·to·noise·but·at·the·cost·of·increased·execution·time·(bool;··default:·True)·[default=True].</p> | ||
| 275 | </dd></dl> | ||
| 276 | <dl·class="attribute"> | ||
| 242 | <dt·id="uves_cal_tflat.param.reduce.rebin.wavestep"> | 277 | <dt·id="uves_cal_tflat.param.reduce.rebin.wavestep"> |
| 243 | <code·class="descclassname">uves_cal_tflat.param.reduce.rebin.</code><code·class="descname">wavestep</code><a·class="headerlink"·href="#uves_cal_tflat.param.reduce.rebin.wavestep"·title="Permalink·to·this·definition">¶</a></dt> | 278 | <code·class="descclassname">uves_cal_tflat.param.reduce.rebin.</code><code·class="descname">wavestep</code><a·class="headerlink"·href="#uves_cal_tflat.param.reduce.rebin.wavestep"·title="Permalink·to·this·definition">¶</a></dt> |
| 244 | <dd><p>The·bin·size·(in·w.l.u.)·in·wavelength·space.·If·negative,·a·step·size··of·2/3·*·(·average·pixel·size·)·is·used.·(float;·default:·-1.0)·[default=-1.0].</p> | 279 | <dd><p>The·bin·size·(in·w.l.u.)·in·wavelength·space.·If·negative,·a·step·size··of·2/3·*·(·average·pixel·size·)·is·used.·(float;·default:·-1.0)·[default=-1.0].</p> |
| 245 | </dd></dl> | 280 | </dd></dl> |
| 246 | <dl·class="attribute"> | 281 | <dl·class="attribute"> |
| 247 | <dt·id="uves_cal_tflat.param.reduce.rebin.scale"> | 282 | <dt·id="uves_cal_tflat.param.reduce.rebin.scale"> |
| Offset 283, 56 lines modified | Offset 325, 14 lines modified | ||
| 283 | <dl·class="attribute"> | 325 | <dl·class="attribute"> |
| 284 | <dt·id="uves_cal_tflat.param.reduce.backsub.smoothy"> | 326 | <dt·id="uves_cal_tflat.param.reduce.backsub.smoothy"> |
| 285 | <code·class="descclassname">uves_cal_tflat.param.reduce.backsub.</code><code·class="descname">smoothy</code><a·class="headerlink"·href="#uves_cal_tflat.param.reduce.backsub.smoothy"·title="Permalink·to·this·definition">¶</a></dt> | 327 | <code·class="descclassname">uves_cal_tflat.param.reduce.backsub.</code><code·class="descname">smoothy</code><a·class="headerlink"·href="#uves_cal_tflat.param.reduce.backsub.smoothy"·title="Permalink·to·this·definition">¶</a></dt> |
| 286 | <dd><p>If·spline·interpolation·is·used·to·measure·the·background,·the··y-radius·of·the·post-smoothing·window·is·(smoothy·*·image_height).··Here,·‘image_height’·is·the·image·height·after·binning.·If·negative,··the·default·values·are·used:·(100.0/2048)·for·blue·flat-field·frames,··(300.0/2048)·for·red·flat-field·frames,·(200.0/2048)·for·blue·science··frames·and·(500.0/2048)·for·red·science·frames.·(float;·default:·-1.0)·[default=-1.0].</p> | 328 | <dd><p>If·spline·interpolation·is·used·to·measure·the·background,·the··y-radius·of·the·post-smoothing·window·is·(smoothy·*·image_height).··Here,·‘image_height’·is·the·image·height·after·binning.·If·negative,··the·default·values·are·used:·(100.0/2048)·for·blue·flat-field·frames,··(300.0/2048)·for·red·flat-field·frames,·(200.0/2048)·for·blue·science··frames·and·(500.0/2048)·for·red·science·frames.·(float;·default:·-1.0)·[default=-1.0].</p> |
| 287 | </dd></dl> | 329 | </dd></dl> |
| 288 | <dl·class="attribute"> | ||
| 289 | <dt·id="uves_cal_tflat.param.reduce.extract.method"> | ||
| 290 | <code·class="descclassname">uves_cal_tflat.param.reduce.extract.</code><code·class="descname">method</code><a·class="headerlink"·href="#uves_cal_tflat.param.reduce.extract.method"·title="Permalink·to·this·definition">¶</a></dt> | ||
| 291 | <dd><p>Extraction·method.·(2d/optimal·not·supported·by·uves_cal_wavecal,··weighted·supported·only·by·uves_cal_wavecal,·2d·not·supported·by··uves_cal_response)·(str;·default:·‘average’)·[default=”average”].</p> | ||
| 292 | </dd></dl> | ||
| 293 | <dl·class="attribute"> | ||
| 294 | <dt·id="uves_cal_tflat.param.reduce.extract.kappa"> | ||
| 295 | <code·class="descclassname">uves_cal_tflat.param.reduce.extract.</code><code·class="descname">kappa</code><a·class="headerlink"·href="#uves_cal_tflat.param.reduce.extract.kappa"·title="Permalink·to·this·definition">¶</a></dt> | ||
| 296 | <dd><p>In·optimal·extraction·mode,·this·is·the·threshold·for·bad·(i.e.··hot/cold)·pixel·rejection.·If·a·pixel·deviates·more·than·kappa*sigma··(where·sigma·is·the·uncertainty·of·the·pixel·flux)·from·the·inferred··spatial·profile,·its·weight·is·set·to·zero.·Range:·[-1,100].·If·this··parameter·is·negative,·no·rejection·is·performed.·(float;·default:··10.0)·[default=10.0].</p> | ||
| 297 | </dd></dl> | ||
| 298 | <dl·class="attribute"> | ||
| 299 | <dt·id="uves_cal_tflat.param.reduce.extract.chunk"> | ||
| 300 | <code·class="descclassname">uves_cal_tflat.param.reduce.extract.</code><code·class="descname">chunk</code><a·class="headerlink"·href="#uves_cal_tflat.param.reduce.extract.chunk"·title="Permalink·to·this·definition">¶</a></dt> | ||
| 301 | <dd><p>In·optimal·extraction·mode,·the·chunk·size·(in·pixels)·used·for··fitting·the·analytical·profile·(a·fit·of·the·analytical·profile·to··single·bins·would·suffer·from·low·statistics).·(int;·default:·32)·[default=32].</p> | ||
| 302 | </dd></dl> | ||
| 303 | <dl·class="attribute"> | ||
| 304 | <dt·id="uves_cal_tflat.param.reduce.extract.profile"> | ||
| 305 | <code·class="descclassname">uves_cal_tflat.param.reduce.extract.</code><code·class="descname">profile</code><a·class="headerlink"·href="#uves_cal_tflat.param.reduce.extract.profile"·title="Permalink·to·this·definition">¶</a></dt> | ||
| 306 | <dd><p>In·optimal·extraction·mode,·the·kind·of·profile·to·use.·‘gauss’·gives··a·Gaussian·profile,·‘moffat’·gives·a·Moffat·profile·with·beta=4·and·a··possible·linear·sky·contribution.·‘virtual’·uses·a·virtual·resampling··algorithm·(i.e.·measures·and·uses·the·actual·object·profile).··‘constant’·assumes·a·constant·spatial·profile·and·allows·optimal··extraction·of·wavelength·calibration·frames.·‘auto’·will·automatically··select·the·best·method·based·on·the·estimated·S/N·of·the·object.·For··low·S/N,·‘moffat’·or·‘gauss’·are·recommended·(for·robustness).·For··high·S/N,·‘virtual’·is·recommended·(for·accuracy).·In·the·case·of··virtual·resampling,·a·precise·determination·of·the·order·positions·is··required;·therefore·the·order-definition·is·repeated·using·the··(assumed·non-low·S/N)·science·frame·(str;·default:·‘auto’)·[default=”auto”].</p> | ||
| 307 | </dd></dl> | ||
| 308 | <dl·class="attribute"> | ||
| 309 | <dt·id="uves_cal_tflat.param.reduce.extract.skymethod"> | ||
| 310 | <code·class="descclassname">uves_cal_tflat.param.reduce.extract.</code><code·class="descname">skymethod</code><a·class="headerlink"·href="#uves_cal_tflat.param.reduce.extract.skymethod"·title="Permalink·to·this·definition">¶</a></dt> | ||
| 311 | <dd><p>In·optimal·extraction·mode,·the·sky·subtraction·method·to·use.··‘median’·estimates·the·sky·as·the·median·of·pixels·along·the·slit··(ignoring·pixels·close·to·the·object),·whereas·‘optimal’·does·a·chi··square·minimization·along·the·slit·to·obtain·the·best·combined·object··and·sky·levels.·The·optimal·method·gives·the·most·accurate·sky··determination·but·is·also·a·bit·slower·than·the·median·method·(str;··default:·‘optimal’)·[default=”optimal”].</p> | ||
| 312 | </dd></dl> | ||
| 313 | <dl·class="attribute"> | ||
| 314 | <dt·id="uves_cal_tflat.param.reduce.extract.oversample"> | ||
| 315 | <code·class="descclassname">uves_cal_tflat.param.reduce.extract.</code><code·class="descname">oversample</code><a·class="headerlink"·href="#uves_cal_tflat.param.reduce.extract.oversample"·title="Permalink·to·this·definition">¶</a></dt> | ||
| 316 | <dd><p>The·oversampling·factor·used·for·the·virtual·resampling·algorithm.·If··negative,·the·value·5·is·used·for·S/N·<=200,·and·the·value·10·is·used··if·the·estimated·S/N·is·>·200·(int;·default:·-1)·[default=-1].</p> | ||
| 317 | </dd></dl> | ||
| 318 | <dl·class="attribute"> | ||
| 319 | <dt·id="uves_cal_tflat.param.reduce.extract.best"> | ||
| 320 | <code·class="descclassname">uves_cal_tflat.param.reduce.extract.</code><code·class="descname">best</code><a·class="headerlink"·href="#uves_cal_tflat.param.reduce.extract.best"·title="Permalink·to·this·definition">¶</a></dt> | ||
| 321 | <dd><p>(optimal·extraction·only)·If·false·(fastest),·the·spectrum·is··extracted·only·once.·If·true·(best),·the·spectrum·is·extracted·twice,··the·second·time·using·improved·variance·estimates·based·on·the·first··iteration.·Better·variance·estimates·slightly·improve·the·obtained··signal·to·noise·but·at·the·cost·of·increased·execution·time·(bool;··default:·True)·[default=True].</p> | ||
| 322 | </dd></dl> | ||
| 323 | <p>The·following·code·snippet·shows·the·default·settings·for·the·available | 330 | <p>The·following·code·snippet·shows·the·default·settings·for·the·available |
| 324 | parameters.</p> | 331 | parameters.</p> |
| 325 | <div·class="highlight-default·notranslate"><div·class="highlight"><pre><span></span><span·class="kn">import</span>·<span·class="nn">cpl</span> | 332 | <div·class="highlight-default·notranslate"><div·class="highlight"><pre><span></span><span·class="kn">import</span>·<span·class="nn">cpl</span> |
| 326 | <span·class="n">uves_cal_tflat</span>·<span·class="o">=</span>·<span·class="n">cpl</span><span·class="o">.</span><span·class="n">Recipe</span><span·class="p">(</span><span·class="s2">"uves_cal_tflat"</span><span·class="p">)</span> | 333 | <span·class="n">uves_cal_tflat</span>·<span·class="o">=</span>·<span·class="n">cpl</span><span·class="o">.</span><span·class="n">Recipe</span><span·class="p">(</span><span·class="s2">"uves_cal_tflat"</span><span·class="p">)</span> |
| 327 | <span·class="n">uves_cal_tflat</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">debug</span>·<span·class="o">=</span>·<span·class="kc">False</span> | 334 | <span·class="n">uves_cal_tflat</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">debug</span>·<span·class="o">=</span>·<span·class="kc">False</span> |
| 328 | <span·class="n">uves_cal_tflat</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">plotter</span>·<span·class="o">=</span>·<span·class="s2">"no"</span> | 335 | <span·class="n">uves_cal_tflat</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">plotter</span>·<span·class="o">=</span>·<span·class="s2">"no"</span> |
| Offset 350, 29 lines modified | Offset 350, 29 lines modified | ||
| 350 | <span·class="n">uves_cal_tflat</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">reduce</span><span·class="o">.</span><span·class="n">objoffset</span>·<span·class="o">=</span>·<span·class="mf">0.0</span> | 350 | <span·class="n">uves_cal_tflat</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">reduce</span><span·class="o">.</span><span·class="n">objoffset</span>·<span·class="o">=</span>·<span·class="mf">0.0</span> |
| 351 | <span·class="n">uves_cal_tflat</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">reduce</span><span·class="o">.</span><span·class="n">objslit</span>·<span·class="o">=</span>·<span·class="o">-</span><span·class="mf">1.0</span> | 351 | <span·class="n">uves_cal_tflat</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">reduce</span><span·class="o">.</span><span·class="n">objslit</span>·<span·class="o">=</span>·<span·class="o">-</span><span·class="mf">1.0</span> |
| 352 | <span·class="n">uves_cal_tflat</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">reduce</span><span·class="o">.</span><span·class="n">tiltcorr</span>·<span·class="o">=</span>·<span·class="kc">True</span> | 352 | <span·class="n">uves_cal_tflat</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">reduce</span><span·class="o">.</span><span·class="n">tiltcorr</span>·<span·class="o">=</span>·<span·class="kc">True</span> |
| 353 | <span·class="n">uves_cal_tflat</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">reduce</span><span·class="o">.</span><span·class="n">ffmethod</span>·<span·class="o">=</span>·<span·class="s2">"extract"</span> | 353 | <span·class="n">uves_cal_tflat</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">reduce</span><span·class="o">.</span><span·class="n">ffmethod</span>·<span·class="o">=</span>·<span·class="s2">"extract"</span> |
| 354 | <span·class="n">uves_cal_tflat</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">reduce</span><span·class="o">.</span><span·class="n">merge</span>·<span·class="o">=</span>·<span·class="s2">"optimal"</span> | 354 | <span·class="n">uves_cal_tflat</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">reduce</span><span·class="o">.</span><span·class="n">merge</span>·<span·class="o">=</span>·<span·class="s2">"optimal"</span> |
| 355 | <span·class="n">uves_cal_tflat</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">reduce</span><span·class="o">.</span><span·class="n">merge_delt1</span>·<span·class="o">=</span>·<span·class="mf">0.0</span> | 355 | <span·class="n">uves_cal_tflat</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">reduce</span><span·class="o">.</span><span·class="n">merge_delt1</span>·<span·class="o">=</span>·<span·class="mf">0.0</span> |
| 356 | <span·class="n">uves_cal_tflat</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">reduce</span><span·class="o">.</span><span·class="n">merge_delt2</span>·<span·class="o">=</span>·<span·class="mf">0.0</span> | 356 | <span·class="n">uves_cal_tflat</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">reduce</span><span·class="o">.</span><span·class="n">merge_delt2</span>·<span·class="o">=</span>·<span·class="mf">0.0</span> |
| 357 | <span·class="n">uves_cal_tflat</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">reduce</span><span·class="o">.</span><span·class="n">extract</span><span·class="o">.</span><span·class="n">method</span>·<span·class="o">=</span>·<span·class="s2">"average"</span> | ||
| 358 | <span·class="n">uves_cal_tflat</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">reduce</span><span·class="o">.</span><span·class="n">extract</span><span·class="o">.</span><span·class="n">kappa</span>·<span·class="o">=</span>·<span·class="mf">10.0</span> | ||
| 359 | <span·class="n">uves_cal_tflat</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">reduce</span><span·class="o">.</span><span·class="n">extract</span><span·class="o">.</span><span·class="n">chunk</span>·<span·class="o">=</span>·<span·class="mi">32</span> | ||
| 360 | <span·class="n">uves_cal_tflat</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">reduce</span><span·class="o">.</span><span·class="n">extract</span><span·class="o">.</span><span·class="n">profile</span>·<span·class="o">=</span>·<span·class="s2">"auto"</span> | ||
| 361 | <span·class="n">uves_cal_tflat</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">reduce</span><span·class="o">.</span><span·class="n">extract</span><span·class="o">.</span><span·class="n">skymethod</span>·<span·class="o">=</span>·<span·class="s2">"optimal"</span> | ||
| 362 | <span·class="n">uves_cal_tflat</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">reduce</span><span·class="o">.</span><span·class="n">extract</span><span·class="o">.</span><span·class="n">oversample</span>·<span·class="o">=</span>·<span·class="o">-</span><span·class="mi">1</span> | ||
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| 270 | <dl·class="attribute"> | 270 | <dl·class="attribute"> |
| 271 | <dt·id="uves_cal_wavecal.param.kappa"> | 271 | <dt·id="uves_cal_wavecal.param.kappa"> |
| 272 | <code·class="descclassname">uves_cal_wavecal.param.</code><code·class="descname">kappa</code><a·class="headerlink"·href="#uves_cal_wavecal.param.kappa"·title="Permalink·to·this·definition">¶</a></dt> | 272 | <code·class="descclassname">uves_cal_wavecal.param.</code><code·class="descname">kappa</code><a·class="headerlink"·href="#uves_cal_wavecal.param.kappa"·title="Permalink·to·this·definition">¶</a></dt> |
| 273 | <dd><p>Lines·with·residuals·more·then·kappa·stdev·are·rejected·from·the·final··fit·(float;·default:·4.0)·[default=4.0].</p> | 273 | <dd><p>Lines·with·residuals·more·then·kappa·stdev·are·rejected·from·the·final··fit·(float;·default:·4.0)·[default=4.0].</p> |
| 274 | </dd></dl> | 274 | </dd></dl> |
| 275 | <dl·class="attribute"> | 275 | <dl·class="attribute"> |
| 276 | <dt·id="uves_cal_wavecal.param.rebin.wavestep"> | ||
| 277 | <code·class="descclassname">uves_cal_wavecal.param.rebin.</code><code·class="descname">wavestep</code><a·class="headerlink"·href="#uves_cal_wavecal.param.rebin.wavestep"·title="Permalink·to·this·definition">¶</a></dt> | ||
| 278 | <dd><p>The·bin·size·(in·w.l.u.)·in·wavelength·space.·If·negative,·a·step·size··of·2/3·*·(·average·pixel·size·)·is·used.·(float;·default:·-1.0)·[default=-1.0].</p> | ||
| 279 | </dd></dl> | ||
| 280 | <dl·class="attribute"> | ||
| 281 | <dt·id="uves_cal_wavecal.param.rebin.scale"> | ||
| 282 | <code·class="descclassname">uves_cal_wavecal.param.rebin.</code><code·class="descname">scale</code><a·class="headerlink"·href="#uves_cal_wavecal.param.rebin.scale"·title="Permalink·to·this·definition">¶</a></dt> | ||
| 283 | <dd><p>Whether·or·not·to·multiply·by·the·factor·dx/dlambda·(pixels·per··wavelength)·during·the·rebinning.·This·option·is·disabled·as·default··in·concordance·with·the·method·used·in·the·MIDAS·pipeline.·This·option··should·be·set·to·true·to·convert·the·observed·flux·(in·pixel-space)·to··a·flux·per·wavelength·(in·wavelength-space).·(bool;·default:·False)·[default=False].</p> | ||
| 284 | </dd></dl> | ||
| 285 | <dl·class="attribute"> | ||
| 286 | <dt·id="uves_cal_wavecal.param.extract.method"> | 276 | <dt·id="uves_cal_wavecal.param.extract.method"> |
| 287 | <code·class="descclassname">uves_cal_wavecal.param.extract.</code><code·class="descname">method</code><a·class="headerlink"·href="#uves_cal_wavecal.param.extract.method"·title="Permalink·to·this·definition">¶</a></dt> | 277 | <code·class="descclassname">uves_cal_wavecal.param.extract.</code><code·class="descname">method</code><a·class="headerlink"·href="#uves_cal_wavecal.param.extract.method"·title="Permalink·to·this·definition">¶</a></dt> |
| 288 | <dd><p>Extraction·method.·(2d/optimal·not·supported·by·uves_cal_wavecal,··weighted·supported·only·by·uves_cal_wavecal,·2d·not·supported·by··uves_cal_response)·(str;·default:·‘average’)·[default=”average”].</p> | 278 | <dd><p>Extraction·method.·(2d/optimal·not·supported·by·uves_cal_wavecal,··weighted·supported·only·by·uves_cal_wavecal,·2d·not·supported·by··uves_cal_response)·(str;·default:·‘average’)·[default=”average”].</p> |
| 289 | </dd></dl> | 279 | </dd></dl> |
| 290 | <dl·class="attribute"> | 280 | <dl·class="attribute"> |
| 291 | <dt·id="uves_cal_wavecal.param.extract.kappa"> | 281 | <dt·id="uves_cal_wavecal.param.extract.kappa"> |
| Offset 323, 14 lines modified | Offset 311, 26 lines modified | ||
| 323 | <dl·class="attribute"> | 311 | <dl·class="attribute"> |
| 324 | <dt·id="uves_cal_wavecal.param.extract.best"> | 312 | <dt·id="uves_cal_wavecal.param.extract.best"> |
| 325 | <code·class="descclassname">uves_cal_wavecal.param.extract.</code><code·class="descname">best</code><a·class="headerlink"·href="#uves_cal_wavecal.param.extract.best"·title="Permalink·to·this·definition">¶</a></dt> | 313 | <code·class="descclassname">uves_cal_wavecal.param.extract.</code><code·class="descname">best</code><a·class="headerlink"·href="#uves_cal_wavecal.param.extract.best"·title="Permalink·to·this·definition">¶</a></dt> |
| 326 | <dd><p>(optimal·extraction·only)·If·false·(fastest),·the·spectrum·is··extracted·only·once.·If·true·(best),·the·spectrum·is·extracted·twice,··the·second·time·using·improved·variance·estimates·based·on·the·first··iteration.·Better·variance·estimates·slightly·improve·the·obtained··signal·to·noise·but·at·the·cost·of·increased·execution·time·(bool;··default:·True)·[default=True].</p> | 314 | <dd><p>(optimal·extraction·only)·If·false·(fastest),·the·spectrum·is··extracted·only·once.·If·true·(best),·the·spectrum·is·extracted·twice,··the·second·time·using·improved·variance·estimates·based·on·the·first··iteration.·Better·variance·estimates·slightly·improve·the·obtained··signal·to·noise·but·at·the·cost·of·increased·execution·time·(bool;··default:·True)·[default=True].</p> |
| 327 | </dd></dl> | 315 | </dd></dl> |
| 316 | <dl·class="attribute"> | ||
| 317 | <dt·id="uves_cal_wavecal.param.rebin.wavestep"> | ||
| 318 | <code·class="descclassname">uves_cal_wavecal.param.rebin.</code><code·class="descname">wavestep</code><a·class="headerlink"·href="#uves_cal_wavecal.param.rebin.wavestep"·title="Permalink·to·this·definition">¶</a></dt> | ||
| 319 | <dd><p>The·bin·size·(in·w.l.u.)·in·wavelength·space.·If·negative,·a·step·size··of·2/3·*·(·average·pixel·size·)·is·used.·(float;·default:·-1.0)·[default=-1.0].</p> | ||
| 320 | </dd></dl> | ||
| 321 | <dl·class="attribute"> | ||
| 322 | <dt·id="uves_cal_wavecal.param.rebin.scale"> | ||
| 323 | <code·class="descclassname">uves_cal_wavecal.param.rebin.</code><code·class="descname">scale</code><a·class="headerlink"·href="#uves_cal_wavecal.param.rebin.scale"·title="Permalink·to·this·definition">¶</a></dt> | ||
| 324 | <dd><p>Whether·or·not·to·multiply·by·the·factor·dx/dlambda·(pixels·per··wavelength)·during·the·rebinning.·This·option·is·disabled·as·default··in·concordance·with·the·method·used·in·the·MIDAS·pipeline.·This·option··should·be·set·to·true·to·convert·the·observed·flux·(in·pixel-space)·to··a·flux·per·wavelength·(in·wavelength-space).·(bool;·default:·False)·[default=False].</p> | ||
| 325 | </dd></dl> | ||
| 328 | <p>The·following·code·snippet·shows·the·default·settings·for·the·available | 326 | <p>The·following·code·snippet·shows·the·default·settings·for·the·available |
| 329 | parameters.</p> | 327 | parameters.</p> |
| 330 | <div·class="highlight-default·notranslate"><div·class="highlight"><pre><span></span><span·class="kn">import</span>·<span·class="nn">cpl</span> | 328 | <div·class="highlight-default·notranslate"><div·class="highlight"><pre><span></span><span·class="kn">import</span>·<span·class="nn">cpl</span> |
| 331 | <span·class="n">uves_cal_wavecal</span>·<span·class="o">=</span>·<span·class="n">cpl</span><span·class="o">.</span><span·class="n">Recipe</span><span·class="p">(</span><span·class="s2">"uves_cal_wavecal"</span><span·class="p">)</span> | 329 | <span·class="n">uves_cal_wavecal</span>·<span·class="o">=</span>·<span·class="n">cpl</span><span·class="o">.</span><span·class="n">Recipe</span><span·class="p">(</span><span·class="s2">"uves_cal_wavecal"</span><span·class="p">)</span> |
| 332 | <span·class="n">uves_cal_wavecal</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">debug</span>·<span·class="o">=</span>·<span·class="kc">False</span> | 330 | <span·class="n">uves_cal_wavecal</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">debug</span>·<span·class="o">=</span>·<span·class="kc">False</span> |
| 333 | <span·class="n">uves_cal_wavecal</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">plotter</span>·<span·class="o">=</span>·<span·class="s2">"no"</span> | 331 | <span·class="n">uves_cal_wavecal</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">plotter</span>·<span·class="o">=</span>·<span·class="s2">"no"</span> |
| Offset 345, 23 lines modified | Offset 345, 23 lines modified | ||
| 345 | <span·class="n">uves_cal_wavecal</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">shiftstep</span>·<span·class="o">=</span>·<span·class="mf">0.1</span> | 345 | <span·class="n">uves_cal_wavecal</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">shiftstep</span>·<span·class="o">=</span>·<span·class="mf">0.1</span> |
| 346 | <span·class="n">uves_cal_wavecal</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">shifttoler</span>·<span·class="o">=</span>·<span·class="mf">0.05</span> | 346 | <span·class="n">uves_cal_wavecal</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">shifttoler</span>·<span·class="o">=</span>·<span·class="mf">0.05</span> |
| 347 | <span·class="n">uves_cal_wavecal</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">alpha</span>·<span·class="o">=</span>·<span·class="mf">0.1</span> | 347 | <span·class="n">uves_cal_wavecal</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">alpha</span>·<span·class="o">=</span>·<span·class="mf">0.1</span> |
| 348 | <span·class="n">uves_cal_wavecal</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">maxerror</span>·<span·class="o">=</span>·<span·class="mf">20.0</span> | 348 | <span·class="n">uves_cal_wavecal</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">maxerror</span>·<span·class="o">=</span>·<span·class="mf">20.0</span> |
| 349 | <span·class="n">uves_cal_wavecal</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">degree</span>·<span·class="o">=</span>·<span·class="mi">4</span> | 349 | <span·class="n">uves_cal_wavecal</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">degree</span>·<span·class="o">=</span>·<span·class="mi">4</span> |
| 350 | <span·class="n">uves_cal_wavecal</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">tolerance</span>·<span·class="o">=</span>·<span·class="mf">0.6</span> | 350 | <span·class="n">uves_cal_wavecal</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">tolerance</span>·<span·class="o">=</span>·<span·class="mf">0.6</span> |
| 351 | <span·class="n">uves_cal_wavecal</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">kappa</span>·<span·class="o">=</span>·<span·class="mf">4.0</span> | 351 | <span·class="n">uves_cal_wavecal</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">kappa</span>·<span·class="o">=</span>·<span·class="mf">4.0</span> |
| 352 | <span·class="n">uves_cal_wavecal</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">rebin</span><span·class="o">.</span><span·class="n">wavestep</span>·<span·class="o">=</span>·<span·class="o">-</span><span·class="mf">1.0</span> | ||
| 353 | <span·class="n">uves_cal_wavecal</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">rebin</span><span·class="o">.</span><span·class="n">scale</span>·<span·class="o">=</span>·<span·class="kc">False</span> | ||
| 354 | <span·class="n">uves_cal_wavecal</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">extract</span><span·class="o">.</span><span·class="n">method</span>·<span·class="o">=</span>·<span·class="s2">"average"</span> | 352 | <span·class="n">uves_cal_wavecal</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">extract</span><span·class="o">.</span><span·class="n">method</span>·<span·class="o">=</span>·<span·class="s2">"average"</span> |
| 355 | <span·class="n">uves_cal_wavecal</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">extract</span><span·class="o">.</span><span·class="n">kappa</span>·<span·class="o">=</span>·<span·class="mf">10.0</span> | 353 | <span·class="n">uves_cal_wavecal</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">extract</span><span·class="o">.</span><span·class="n">kappa</span>·<span·class="o">=</span>·<span·class="mf">10.0</span> |
| 356 | <span·class="n">uves_cal_wavecal</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">extract</span><span·class="o">.</span><span·class="n">chunk</span>·<span·class="o">=</span>·<span·class="mi">32</span> | 354 | <span·class="n">uves_cal_wavecal</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">extract</span><span·class="o">.</span><span·class="n">chunk</span>·<span·class="o">=</span>·<span·class="mi">32</span> |
| 357 | <span·class="n">uves_cal_wavecal</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">extract</span><span·class="o">.</span><span·class="n">profile</span>·<span·class="o">=</span>·<span·class="s2">"auto"</span> | 355 | <span·class="n">uves_cal_wavecal</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">extract</span><span·class="o">.</span><span·class="n">profile</span>·<span·class="o">=</span>·<span·class="s2">"auto"</span> |
| 358 | <span·class="n">uves_cal_wavecal</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">extract</span><span·class="o">.</span><span·class="n">skymethod</span>·<span·class="o">=</span>·<span·class="s2">"optimal"</span> | 356 | <span·class="n">uves_cal_wavecal</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">extract</span><span·class="o">.</span><span·class="n">skymethod</span>·<span·class="o">=</span>·<span·class="s2">"optimal"</span> |
| 359 | <span·class="n">uves_cal_wavecal</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">extract</span><span·class="o">.</span><span·class="n">oversample</span>·<span·class="o">=</span>·<span·class="o">-</span><span·class="mi">1</span> | 357 | <span·class="n">uves_cal_wavecal</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">extract</span><span·class="o">.</span><span·class="n">oversample</span>·<span·class="o">=</span>·<span·class="o">-</span><span·class="mi">1</span> |
| 360 | <span·class="n">uves_cal_wavecal</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">extract</span><span·class="o">.</span><span·class="n">best</span>·<span·class="o">=</span>·<span·class="kc">True</span> | 358 | <span·class="n">uves_cal_wavecal</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">extract</span><span·class="o">.</span><span·class="n">best</span>·<span·class="o">=</span>·<span·class="kc">True</span> |
| 359 | <span·class="n">uves_cal_wavecal</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">rebin</span><span·class="o">.</span><span·class="n">wavestep</span>·<span·class="o">=</span>·<span·class="o">-</span><span·class="mf">1.0</span> | ||
| 360 | <span·class="n">uves_cal_wavecal</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">rebin</span><span·class="o">.</span><span·class="n">scale</span>·<span·class="o">=</span>·<span·class="kc">False</span> | ||
| 361 | </pre></div> | 361 | </pre></div> |
| 362 | </div> | 362 | </div> |
| 363 | <p>You·may·also·set·or·overwrite·some·or·all·parameters·by·the·recipe | 363 | <p>You·may·also·set·or·overwrite·some·or·all·parameters·by·the·recipe |
| 364 | parameter·<cite>param</cite>,·as·shown·in·the·following·example:</p> | 364 | parameter·<cite>param</cite>,·as·shown·in·the·following·example:</p> |
| 365 | <div·class="highlight-default·notranslate"><div·class="highlight"><pre><span></span><span·class="kn">import</span>·<span·class="nn">cpl</span> | 365 | <div·class="highlight-default·notranslate"><div·class="highlight"><pre><span></span><span·class="kn">import</span>·<span·class="nn">cpl</span> |
| 366 | <span·class="n">uves_cal_wavecal</span>·<span·class="o">=</span>·<span·class="n">cpl</span><span·class="o">.</span><span·class="n">Recipe</span><span·class="p">(</span><span·class="s2">"uves_cal_wavecal"</span><span·class="p">)</span> | 366 | <span·class="n">uves_cal_wavecal</span>·<span·class="o">=</span>·<span·class="n">cpl</span><span·class="o">.</span><span·class="n">Recipe</span><span·class="p">(</span><span·class="s2">"uves_cal_wavecal"</span><span·class="p">)</span> |
| 367 | <span·class="p">[</span><span·class="o">...</span><span·class="p">]</span> | 367 | <span·class="p">[</span><span·class="o">...</span><span·class="p">]</span> |
| Offset 152, 14 lines modified | Offset 152, 44 lines modified | ||
| 152 | <dl·class="attribute"> | 152 | <dl·class="attribute"> |
| 153 | <dt·id="uves_obs_redchain.param.process_chip"> | 153 | <dt·id="uves_obs_redchain.param.process_chip"> |
| 154 | <code·class="descclassname">uves_obs_redchain.param.</code><code·class="descname">process_chip</code><a·class="headerlink"·href="#uves_obs_redchain.param.process_chip"·title="Permalink·to·this·definition">¶</a></dt> | 154 | <code·class="descclassname">uves_obs_redchain.param.</code><code·class="descname">process_chip</code><a·class="headerlink"·href="#uves_obs_redchain.param.process_chip"·title="Permalink·to·this·definition">¶</a></dt> |
| 155 | <dd><p>For·RED·arm·data·process·the·redl,·redu,·or·both·chip(s)·(str;··default:·‘both’)·[default=”both”].</p> | 155 | <dd><p>For·RED·arm·data·process·the·redl,·redu,·or·both·chip(s)·(str;··default:·‘both’)·[default=”both”].</p> |
| 156 | </dd></dl> | 156 | </dd></dl> |
| 157 | <dl·class="attribute"> | 157 | <dl·class="attribute"> |
| 158 | <dt·id="uves_obs_redchain.param.uves_cal_mbias.clean_traps"> | ||
| 159 | <code·class="descclassname">uves_obs_redchain.param.uves_cal_mbias.</code><code·class="descname">clean_traps</code><a·class="headerlink"·href="#uves_obs_redchain.param.uves_cal_mbias.clean_traps"·title="Permalink·to·this·definition">¶</a></dt> | ||
| 160 | <dd><p>Clean·detector·traps.·If·TRUE·detector·traps·are·interpolated.The·bad··pixels·are·replaced·by·the·average·of·thenearest·good·pixels·in·the··same·column,·or·simply·marked·as·bad.·The·positions·of·bad·pixels·are··hard-coded·(as·function·of·UVES·chip).·(bool;·default:·False)·[default=False].</p> | ||
| 161 | </dd></dl> | ||
| 162 | <dl·class="attribute"> | ||
| 163 | <dt·id="uves_obs_redchain.param.uves_cal_mbias.stack_method"> | ||
| 164 | <code·class="descclassname">uves_obs_redchain.param.uves_cal_mbias.</code><code·class="descname">stack_method</code><a·class="headerlink"·href="#uves_obs_redchain.param.uves_cal_mbias.stack_method"·title="Permalink·to·this·definition">¶</a></dt> | ||
| 165 | <dd><p>Method·used·to·build·master·frame··(str;·default:·‘median’)·[default=”median”].</p> | ||
| 166 | </dd></dl> | ||
| 167 | <dl·class="attribute"> | ||
| 168 | <dt·id="uves_obs_redchain.param.uves_cal_mbias.klow"> | ||
| 169 | <code·class="descclassname">uves_obs_redchain.param.uves_cal_mbias.</code><code·class="descname">klow</code><a·class="headerlink"·href="#uves_obs_redchain.param.uves_cal_mbias.klow"·title="Permalink·to·this·definition">¶</a></dt> | ||
| 170 | <dd><p>Kappa·used·to·clip·low·level·values,·when·method·is·set·to·‘mean’··(float;·default:·5.0)·[default=5.0].</p> | ||
| 171 | </dd></dl> | ||
| 172 | <dl·class="attribute"> | ||
| 173 | <dt·id="uves_obs_redchain.param.uves_cal_mbias.khigh"> | ||
| 174 | <code·class="descclassname">uves_obs_redchain.param.uves_cal_mbias.</code><code·class="descname">khigh</code><a·class="headerlink"·href="#uves_obs_redchain.param.uves_cal_mbias.khigh"·title="Permalink·to·this·definition">¶</a></dt> | ||
| 175 | <dd><p>Kappa·used·to·clip·high·level·values,·when·method·is·set·to·‘mean’··(float;·default:·5.0)·[default=5.0].</p> | ||
| 176 | </dd></dl> | ||
| 177 | <dl·class="attribute"> | ||
| 178 | <dt·id="uves_obs_redchain.param.uves_cal_mbias.niter"> | ||
| 179 | <code·class="descclassname">uves_obs_redchain.param.uves_cal_mbias.</code><code·class="descname">niter</code><a·class="headerlink"·href="#uves_obs_redchain.param.uves_cal_mbias.niter"·title="Permalink·to·this·definition">¶</a></dt> | ||
| 180 | <dd><p>Number·of·kappa·sigma·iterations,·when·method·is·set·to·‘mean’··(int;··default:·5)·[default=5].</p> | ||
| 181 | </dd></dl> | ||
| 182 | <dl·class="attribute"> | ||
| 158 | <dt·id="uves_obs_redchain.param.uves_cal_wavecal.nwindows"> | 183 | <dt·id="uves_obs_redchain.param.uves_cal_wavecal.nwindows"> |
| 159 | <code·class="descclassname">uves_obs_redchain.param.uves_cal_wavecal.</code><code·class="descname">nwindows</code><a·class="headerlink"·href="#uves_obs_redchain.param.uves_cal_wavecal.nwindows"·title="Permalink·to·this·definition">¶</a></dt> | 184 | <code·class="descclassname">uves_obs_redchain.param.uves_cal_wavecal.</code><code·class="descname">nwindows</code><a·class="headerlink"·href="#uves_obs_redchain.param.uves_cal_wavecal.nwindows"·title="Permalink·to·this·definition">¶</a></dt> |
| 160 | <dd><p>Number·of·extraction·windows·per·trace.·The·windows·will·be·aligned··(i.e.·no·overlap·and·no·spacing·between·adjacent·windows).·Unless·an··offset·is·specified,·the·middle·window(s)·is·centered·on·the·trace··(int;·default:·3)·[default=3].</p> | 185 | <dd><p>Number·of·extraction·windows·per·trace.·The·windows·will·be·aligned··(i.e.·no·overlap·and·no·spacing·between·adjacent·windows).·Unless·an··offset·is·specified,·the·middle·window(s)·is·centered·on·the·trace··(int;·default:·3)·[default=3].</p> |
| 161 | </dd></dl> | 186 | </dd></dl> |
| 162 | <dl·class="attribute"> | 187 | <dl·class="attribute"> |
| 163 | <dt·id="uves_obs_redchain.param.uves_cal_wavecal.length"> | 188 | <dt·id="uves_obs_redchain.param.uves_cal_wavecal.length"> |
| Offset 290, 14 lines modified | Offset 320, 56 lines modified | ||
| 290 | <dl·class="attribute"> | 320 | <dl·class="attribute"> |
| 291 | <dt·id="uves_obs_redchain.param.uves_cal_wavecal.rebin.scale"> | 321 | <dt·id="uves_obs_redchain.param.uves_cal_wavecal.rebin.scale"> |
| 292 | <code·class="descclassname">uves_obs_redchain.param.uves_cal_wavecal.rebin.</code><code·class="descname">scale</code><a·class="headerlink"·href="#uves_obs_redchain.param.uves_cal_wavecal.rebin.scale"·title="Permalink·to·this·definition">¶</a></dt> | 322 | <code·class="descclassname">uves_obs_redchain.param.uves_cal_wavecal.rebin.</code><code·class="descname">scale</code><a·class="headerlink"·href="#uves_obs_redchain.param.uves_cal_wavecal.rebin.scale"·title="Permalink·to·this·definition">¶</a></dt> |
| 293 | <dd><p>Whether·or·not·to·multiply·by·the·factor·dx/dlambda·(pixels·per··wavelength)·during·the·rebinning.·This·option·is·disabled·as·default··in·concordance·with·the·method·used·in·the·MIDAS·pipeline.·This·option··should·be·set·to·true·to·convert·the·observed·flux·(in·pixel-space)·to··a·flux·per·wavelength·(in·wavelength-space).·(bool;·default:·False)·[default=False].</p> | 323 | <dd><p>Whether·or·not·to·multiply·by·the·factor·dx/dlambda·(pixels·per··wavelength)·during·the·rebinning.·This·option·is·disabled·as·default··in·concordance·with·the·method·used·in·the·MIDAS·pipeline.·This·option··should·be·set·to·true·to·convert·the·observed·flux·(in·pixel-space)·to··a·flux·per·wavelength·(in·wavelength-space).·(bool;·default:·False)·[default=False].</p> |
| 294 | </dd></dl> | 324 | </dd></dl> |
| 295 | <dl·class="attribute"> | 325 | <dl·class="attribute"> |
| 326 | <dt·id="uves_obs_redchain.param.uves_cal_mflat.norm_method"> | ||
| 327 | <code·class="descclassname">uves_obs_redchain.param.uves_cal_mflat.</code><code·class="descname">norm_method</code><a·class="headerlink"·href="#uves_obs_redchain.param.uves_cal_mflat.norm_method"·title="Permalink·to·this·definition">¶</a></dt> | ||
| 328 | <dd><p>Method·used·to·build·master·frame··(str;·default:·‘explevel’)·[default=”explevel”].</p> | ||
| 329 | </dd></dl> | ||
| 330 | <dl·class="attribute"> | ||
| 331 | <dt·id="uves_obs_redchain.param.uves_cal_mflat.backsub.mmethod"> | ||
| 332 | <code·class="descclassname">uves_obs_redchain.param.uves_cal_mflat.backsub.</code><code·class="descname">mmethod</code><a·class="headerlink"·href="#uves_obs_redchain.param.uves_cal_mflat.backsub.mmethod"·title="Permalink·to·this·definition">¶</a></dt> | ||
| 333 | <dd><p>Background·measuring·method.·If·equal·to·‘median’·the·background·is··sampled·using·the·median·of·a·subwindow.·If·‘minimum’,·the·subwindow··minimum·value·is·used.·If·‘no’,·no·background·subtraction·is·done.··(str;·default:·‘median’)·[default=”median”].</p> | ||
| 334 | </dd></dl> | ||
| 335 | <dl·class="attribute"> | ||
| 336 | <dt·id="uves_obs_redchain.param.uves_cal_mflat.backsub.npoints"> | ||
| 337 | <code·class="descclassname">uves_obs_redchain.param.uves_cal_mflat.backsub.</code><code·class="descname">npoints</code><a·class="headerlink"·href="#uves_obs_redchain.param.uves_cal_mflat.backsub.npoints"·title="Permalink·to·this·definition">¶</a></dt> | ||
| 338 | <dd><p>This·is·the·number·of·columns·in·interorder·space·used·to·sample·the··background.·(int;·default:·82)·[default=82].</p> | ||
| 339 | </dd></dl> | ||
| 340 | <dl·class="attribute"> | ||
| 341 | <dt·id="uves_obs_redchain.param.uves_cal_mflat.backsub.radiusy"> | ||
| 342 | <code·class="descclassname">uves_obs_redchain.param.uves_cal_mflat.backsub.</code><code·class="descname">radiusy</code><a·class="headerlink"·href="#uves_obs_redchain.param.uves_cal_mflat.backsub.radiusy"·title="Permalink·to·this·definition">¶</a></dt> | ||
| 343 | <dd><p>The·height·(in·pixels)·of·the·background·sampling·window·is·(2*radiusy··+·1).·This·parameter·is·not·corrected·for·binning.·(int;·default:·2)·[default=2].</p> | ||
| 344 | </dd></dl> | ||
| 345 | <dl·class="attribute"> | ||
| 346 | <dt·id="uves_obs_redchain.param.uves_cal_mflat.backsub.sdegree"> | ||
| 347 | <code·class="descclassname">uves_obs_redchain.param.uves_cal_mflat.backsub.</code><code·class="descname">sdegree</code><a·class="headerlink"·href="#uves_obs_redchain.param.uves_cal_mflat.backsub.sdegree"·title="Permalink·to·this·definition">¶</a></dt> | ||
| 348 | <dd><p>Degree·of·interpolating·splines.·Currently·only·degree·=·1·is··supported·(int;·default:·1)·[default=1].</p> | ||
| 349 | </dd></dl> | ||
| 350 | <dl·class="attribute"> | ||
| 351 | <dt·id="uves_obs_redchain.param.uves_cal_mflat.backsub.smoothx"> | ||
| 352 | <code·class="descclassname">uves_obs_redchain.param.uves_cal_mflat.backsub.</code><code·class="descname">smoothx</code><a·class="headerlink"·href="#uves_obs_redchain.param.uves_cal_mflat.backsub.smoothx"·title="Permalink·to·this·definition">¶</a></dt> | ||
| 353 | <dd><p>If·spline·interpolation·is·used·to·measure·the·background,·the··x-radius·of·the·post-smoothing·window·is·(smoothx·*·image_width).··Here,·‘image_width’·is·the·image·width·after·binning.·If·negative,·the··default·values·are·used:·(25.0/4096)·for·blue·flat-field·frames,··(50.0/4096)·for·red·flat-field·frames,·(300.0/4096)·for·blue·science··frames·and·(300.0/4096)·for·red·science·frames.·(float;·default:·-1.0)·[default=-1.0].</p> | ||
| 354 | </dd></dl> | ||
| 355 | <dl·class="attribute"> | ||
| 356 | <dt·id="uves_obs_redchain.param.uves_cal_mflat.backsub.smoothy"> | ||
| 357 | <code·class="descclassname">uves_obs_redchain.param.uves_cal_mflat.backsub.</code><code·class="descname">smoothy</code><a·class="headerlink"·href="#uves_obs_redchain.param.uves_cal_mflat.backsub.smoothy"·title="Permalink·to·this·definition">¶</a></dt> | ||
| 358 | <dd><p>If·spline·interpolation·is·used·to·measure·the·background,·the··y-radius·of·the·post-smoothing·window·is·(smoothy·*·image_height).··Here,·‘image_height’·is·the·image·height·after·binning.·If·negative,··the·default·values·are·used:·(100.0/2048)·for·blue·flat-field·frames,··(300.0/2048)·for·red·flat-field·frames,·(200.0/2048)·for·blue·science··frames·and·(500.0/2048)·for·red·science·frames.·(float;·default:·-1.0)·[default=-1.0].</p> | ||
| 359 | </dd></dl> | ||
| 360 | <dl·class="attribute"> | ||
| 296 | <dt·id="uves_obs_redchain.param.uves_cal_predict.mbox_x"> | 361 | <dt·id="uves_obs_redchain.param.uves_cal_predict.mbox_x"> |
| 297 | <code·class="descclassname">uves_obs_redchain.param.uves_cal_predict.</code><code·class="descname">mbox_x</code><a·class="headerlink"·href="#uves_obs_redchain.param.uves_cal_predict.mbox_x"·title="Permalink·to·this·definition">¶</a></dt> | 362 | <code·class="descclassname">uves_obs_redchain.param.uves_cal_predict.</code><code·class="descname">mbox_x</code><a·class="headerlink"·href="#uves_obs_redchain.param.uves_cal_predict.mbox_x"·title="Permalink·to·this·definition">¶</a></dt> |
| 298 | <dd><p>Match·box·X·size·(int;·default:·40)·[default=40].</p> | 363 | <dd><p>Match·box·X·size·(int;·default:·40)·[default=40].</p> |
| 299 | </dd></dl> | 364 | </dd></dl> |
| 300 | <dl·class="attribute"> | 365 | <dl·class="attribute"> |
| 301 | <dt·id="uves_obs_redchain.param.uves_cal_predict.mbox_y"> | 366 | <dt·id="uves_obs_redchain.param.uves_cal_predict.mbox_y"> |
| Offset 362, 71 lines modified | Offset 434, 161 lines modified | ||
| 362 | <dl·class="attribute"> | 434 | <dl·class="attribute"> |
| 363 | <dt·id="uves_obs_redchain.param.uves_cal_predict.tol"> | 435 | <dt·id="uves_obs_redchain.param.uves_cal_predict.tol"> |
| 364 | <code·class="descclassname">uves_obs_redchain.param.uves_cal_predict.</code><code·class="descname">tol</code><a·class="headerlink"·href="#uves_obs_redchain.param.uves_cal_predict.tol"·title="Permalink·to·this·definition">¶</a></dt> | 436 | <code·class="descclassname">uves_obs_redchain.param.uves_cal_predict.</code><code·class="descname">tol</code><a·class="headerlink"·href="#uves_obs_redchain.param.uves_cal_predict.tol"·title="Permalink·to·this·definition">¶</a></dt> |
| 365 | <dd><p>Tolerance·in·kappa·sigma·clipping·on·RESIDUAL·between·YFIT·and·Y··columns·(float;·default:·2.0)·[default=2.0].</p> | 437 | <dd><p>Tolerance·in·kappa·sigma·clipping·on·RESIDUAL·between·YFIT·and·Y··columns·(float;·default:·2.0)·[default=2.0].</p> |
| 366 | </dd></dl> | 438 | </dd></dl> |
| 367 | <dl·class="attribute"> | 439 | <dl·class="attribute"> |
| 368 | <dt·id="uves_obs_redchain.param.uves_ | 440 | <dt·id="uves_obs_redchain.param.uves_obs_scired.clean_traps"> |
| 369 | <code·class="descclassname">uves_obs_redchain.param.uves_ | 441 | <code·class="descclassname">uves_obs_redchain.param.uves_obs_scired.</code><code·class="descname">clean_traps</code><a·class="headerlink"·href="#uves_obs_redchain.param.uves_obs_scired.clean_traps"·title="Permalink·to·this·definition">¶</a></dt> |
| 370 | <dd><p>Clean·detector·traps.·If·TRUE·detector·traps·are·interpolated.The·bad··pixels·are·replaced·by·the·average·of·thenearest·good·pixels·in·the··same·column,·or·simply·marked·as·bad.·The·positions·of·bad·pixels·are··hard-coded·(as·function·of·UVES·chip).·(bool;·default:·False)·[default=False].</p> | 442 | <dd><p>Clean·detector·traps.·If·TRUE·detector·traps·are·interpolated.The·bad··pixels·are·replaced·by·the·average·of·thenearest·good·pixels·in·the··same·column,·or·simply·marked·as·bad.·The·positions·of·bad·pixels·are··hard-coded·(as·function·of·UVES·chip).·(bool;·default:·False)·[default=False].</p> |
| 371 | </dd></dl> | 443 | </dd></dl> |
| 372 | <dl·class="attribute"> | 444 | <dl·class="attribute"> |
| 373 | <dt·id="uves_obs_redchain.param.uves_cal_mbias.stack_method"> | ||
| 374 | <code·class="descclassname">uves_obs_redchain.param.uves_cal_mbias.</code><code·class="descname">stack_method</code><a·class="headerlink"·href="#uves_obs_redchain.param.uves_cal_mbias.stack_method"·title="Permalink·to·this·definition">¶</a></dt> | ||
| 375 | <d | 445 | <dt·id="uves_obs_redchain.param.uves_obs_scired.reduce.slitlength"> |
| 446 | <code·class="descclassname">uves_obs_redchain.param.uves_obs_scired.reduce.</code><code·class="descname">slitlength</code><a·class="headerlink"·href="#uves_obs_redchain.param.uves_obs_scired.reduce.slitlength"·title="Permalink·to·this·definition">¶</a></dt> | ||
| 447 | <dd><p>Extraction·slit·length·(in·pixels).·If·negative,·the·value·inferred··from·the·raw·frame·header·is·used·(float;·default:·-1.0)·[default=-1.0].</p> | ||
| 376 | </dd></dl> | 448 | </dd></dl> |
| 377 | <dl·class="attribute"> | 449 | <dl·class="attribute"> |
| 378 | <dt·id="uves_obs_redchain.param.uves_cal_mbias.klow"> | ||
| 379 | <code·class="descclassname">uves_obs_redchain.param.uves_cal_mbias.</code><code·class="descname">klow</code><a·class="headerlink"·href="#uves_obs_redchain.param.uves_cal_mbias.klow"·title="Permalink·to·this·definition">¶</a></dt> | ||
| 380 | <d | 450 | <dt·id="uves_obs_redchain.param.uves_obs_scired.reduce.skysub"> |
| 451 | <code·class="descclassname">uves_obs_redchain.param.uves_obs_scired.reduce.</code><code·class="descname">skysub</code><a·class="headerlink"·href="#uves_obs_redchain.param.uves_obs_scired.reduce.skysub"·title="Permalink·to·this·definition">¶</a></dt> | ||
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| 237 | <dl·class="attribute"> | 237 | <dl·class="attribute"> |
| 238 | <dt·id="uves_obs_scired.param.reduce.merge_delt2"> | 238 | <dt·id="uves_obs_scired.param.reduce.merge_delt2"> |
| 239 | <code·class="descclassname">uves_obs_scired.param.reduce.</code><code·class="descname">merge_delt2</code><a·class="headerlink"·href="#uves_obs_scired.param.reduce.merge_delt2"·title="Permalink·to·this·definition">¶</a></dt> | 239 | <code·class="descclassname">uves_obs_scired.param.reduce.</code><code·class="descname">merge_delt2</code><a·class="headerlink"·href="#uves_obs_scired.param.reduce.merge_delt2"·title="Permalink·to·this·definition">¶</a></dt> |
| 240 | <dd><p>Order·merging·right·hand·(long·wavelength)·cut.·To·reduce·the·amount··of·order·overlapping·regions·we·allow·to·cut·short·and·long·wavelength··ranges.·This·may·reduce·the·ripple·possibly·introduced·by·the·order··merging.·Suggested·values·is·4·(float;·default:·0.0)·[default=0.0].</p> | 240 | <dd><p>Order·merging·right·hand·(long·wavelength)·cut.·To·reduce·the·amount··of·order·overlapping·regions·we·allow·to·cut·short·and·long·wavelength··ranges.·This·may·reduce·the·ripple·possibly·introduced·by·the·order··merging.·Suggested·values·is·4·(float;·default:·0.0)·[default=0.0].</p> |
| 241 | </dd></dl> | 241 | </dd></dl> |
| 242 | <dl·class="attribute"> | 242 | <dl·class="attribute"> |
| 243 | <dt·id="uves_obs_scired.param.reduce.extract.method"> | ||
| 244 | <code·class="descclassname">uves_obs_scired.param.reduce.extract.</code><code·class="descname">method</code><a·class="headerlink"·href="#uves_obs_scired.param.reduce.extract.method"·title="Permalink·to·this·definition">¶</a></dt> | ||
| 245 | <dd><p>Extraction·method.·(2d/optimal·not·supported·by·uves_cal_wavecal,··weighted·supported·only·by·uves_cal_wavecal,·2d·not·supported·by··uves_cal_response)·(str;·default:·‘optimal’)·[default=”optimal”].</p> | ||
| 246 | </dd></dl> | ||
| 247 | <dl·class="attribute"> | ||
| 248 | <dt·id="uves_obs_scired.param.reduce.extract.kappa"> | ||
| 249 | <code·class="descclassname">uves_obs_scired.param.reduce.extract.</code><code·class="descname">kappa</code><a·class="headerlink"·href="#uves_obs_scired.param.reduce.extract.kappa"·title="Permalink·to·this·definition">¶</a></dt> | ||
| 250 | <dd><p>In·optimal·extraction·mode,·this·is·the·threshold·for·bad·(i.e.··hot/cold)·pixel·rejection.·If·a·pixel·deviates·more·than·kappa*sigma··(where·sigma·is·the·uncertainty·of·the·pixel·flux)·from·the·inferred··spatial·profile,·its·weight·is·set·to·zero.·Range:·[-1,100].·If·this··parameter·is·negative,·no·rejection·is·performed.·(float;·default:··10.0)·[default=10.0].</p> | ||
| 251 | </dd></dl> | ||
| 252 | <dl·class="attribute"> | ||
| 253 | <dt·id="uves_obs_scired.param.reduce.extract.chunk"> | ||
| 254 | <code·class="descclassname">uves_obs_scired.param.reduce.extract.</code><code·class="descname">chunk</code><a·class="headerlink"·href="#uves_obs_scired.param.reduce.extract.chunk"·title="Permalink·to·this·definition">¶</a></dt> | ||
| 255 | <dd><p>In·optimal·extraction·mode,·the·chunk·size·(in·pixels)·used·for··fitting·the·analytical·profile·(a·fit·of·the·analytical·profile·to··single·bins·would·suffer·from·low·statistics).·(int;·default:·32)·[default=32].</p> | ||
| 256 | </dd></dl> | ||
| 257 | <dl·class="attribute"> | ||
| 258 | <dt·id="uves_obs_scired.param.reduce.extract.profile"> | ||
| 259 | <code·class="descclassname">uves_obs_scired.param.reduce.extract.</code><code·class="descname">profile</code><a·class="headerlink"·href="#uves_obs_scired.param.reduce.extract.profile"·title="Permalink·to·this·definition">¶</a></dt> | ||
| 260 | <dd><p>In·optimal·extraction·mode,·the·kind·of·profile·to·use.·‘gauss’·gives··a·Gaussian·profile,·‘moffat’·gives·a·Moffat·profile·with·beta=4·and·a··possible·linear·sky·contribution.·‘virtual’·uses·a·virtual·resampling··algorithm·(i.e.·measures·and·uses·the·actual·object·profile).··‘constant’·assumes·a·constant·spatial·profile·and·allows·optimal··extraction·of·wavelength·calibration·frames.·‘auto’·will·automatically··select·the·best·method·based·on·the·estimated·S/N·of·the·object.·For··low·S/N,·‘moffat’·or·‘gauss’·are·recommended·(for·robustness).·For··high·S/N,·‘virtual’·is·recommended·(for·accuracy).·In·the·case·of··virtual·resampling,·a·precise·determination·of·the·order·positions·is··required;·therefore·the·order-definition·is·repeated·using·the··(assumed·non-low·S/N)·science·frame·(str;·default:·‘auto’)·[default=”auto”].</p> | ||
| 261 | </dd></dl> | ||
| 262 | <dl·class="attribute"> | ||
| 263 | <dt·id="uves_obs_scired.param.reduce.extract.skymethod"> | ||
| 264 | <code·class="descclassname">uves_obs_scired.param.reduce.extract.</code><code·class="descname">skymethod</code><a·class="headerlink"·href="#uves_obs_scired.param.reduce.extract.skymethod"·title="Permalink·to·this·definition">¶</a></dt> | ||
| 265 | <dd><p>In·optimal·extraction·mode,·the·sky·subtraction·method·to·use.··‘median’·estimates·the·sky·as·the·median·of·pixels·along·the·slit··(ignoring·pixels·close·to·the·object),·whereas·‘optimal’·does·a·chi··square·minimization·along·the·slit·to·obtain·the·best·combined·object··and·sky·levels.·The·optimal·method·gives·the·most·accurate·sky··determination·but·is·also·a·bit·slower·than·the·median·method·(str;··default:·‘optimal’)·[default=”optimal”].</p> | ||
| 266 | </dd></dl> | ||
| 267 | <dl·class="attribute"> | ||
| 268 | <dt·id="uves_obs_scired.param.reduce.extract.oversample"> | ||
| 269 | <code·class="descclassname">uves_obs_scired.param.reduce.extract.</code><code·class="descname">oversample</code><a·class="headerlink"·href="#uves_obs_scired.param.reduce.extract.oversample"·title="Permalink·to·this·definition">¶</a></dt> | ||
| 270 | <dd><p>The·oversampling·factor·used·for·the·virtual·resampling·algorithm.·If··negative,·the·value·5·is·used·for·S/N·<=200,·and·the·value·10·is·used··if·the·estimated·S/N·is·>·200·(int;·default:·-1)·[default=-1].</p> | ||
| 271 | </dd></dl> | ||
| 272 | <dl·class="attribute"> | ||
| 273 | <dt·id="uves_obs_scired.param.reduce.extract.best"> | ||
| 274 | <code·class="descclassname">uves_obs_scired.param.reduce.extract.</code><code·class="descname">best</code><a·class="headerlink"·href="#uves_obs_scired.param.reduce.extract.best"·title="Permalink·to·this·definition">¶</a></dt> | ||
| 275 | <dd><p>(optimal·extraction·only)·If·false·(fastest),·the·spectrum·is··extracted·only·once.·If·true·(best),·the·spectrum·is·extracted·twice,··the·second·time·using·improved·variance·estimates·based·on·the·first··iteration.·Better·variance·estimates·slightly·improve·the·obtained··signal·to·noise·but·at·the·cost·of·increased·execution·time·(bool;··default:·True)·[default=True].</p> | ||
| 276 | </dd></dl> | ||
| 277 | <dl·class="attribute"> | ||
| 243 | <dt·id="uves_obs_scired.param.reduce.rebin.wavestep"> | 278 | <dt·id="uves_obs_scired.param.reduce.rebin.wavestep"> |
| 244 | <code·class="descclassname">uves_obs_scired.param.reduce.rebin.</code><code·class="descname">wavestep</code><a·class="headerlink"·href="#uves_obs_scired.param.reduce.rebin.wavestep"·title="Permalink·to·this·definition">¶</a></dt> | 279 | <code·class="descclassname">uves_obs_scired.param.reduce.rebin.</code><code·class="descname">wavestep</code><a·class="headerlink"·href="#uves_obs_scired.param.reduce.rebin.wavestep"·title="Permalink·to·this·definition">¶</a></dt> |
| 245 | <dd><p>The·bin·size·(in·w.l.u.)·in·wavelength·space.·If·negative,·a·step·size··of·2/3·*·(·average·pixel·size·)·is·used.·(float;·default:·-1.0)·[default=-1.0].</p> | 280 | <dd><p>The·bin·size·(in·w.l.u.)·in·wavelength·space.·If·negative,·a·step·size··of·2/3·*·(·average·pixel·size·)·is·used.·(float;·default:·-1.0)·[default=-1.0].</p> |
| 246 | </dd></dl> | 281 | </dd></dl> |
| 247 | <dl·class="attribute"> | 282 | <dl·class="attribute"> |
| 248 | <dt·id="uves_obs_scired.param.reduce.rebin.scale"> | 283 | <dt·id="uves_obs_scired.param.reduce.rebin.scale"> |
| Offset 284, 56 lines modified | Offset 326, 14 lines modified | ||
| 284 | <dl·class="attribute"> | 326 | <dl·class="attribute"> |
| 285 | <dt·id="uves_obs_scired.param.reduce.backsub.smoothy"> | 327 | <dt·id="uves_obs_scired.param.reduce.backsub.smoothy"> |
| 286 | <code·class="descclassname">uves_obs_scired.param.reduce.backsub.</code><code·class="descname">smoothy</code><a·class="headerlink"·href="#uves_obs_scired.param.reduce.backsub.smoothy"·title="Permalink·to·this·definition">¶</a></dt> | 328 | <code·class="descclassname">uves_obs_scired.param.reduce.backsub.</code><code·class="descname">smoothy</code><a·class="headerlink"·href="#uves_obs_scired.param.reduce.backsub.smoothy"·title="Permalink·to·this·definition">¶</a></dt> |
| 287 | <dd><p>If·spline·interpolation·is·used·to·measure·the·background,·the··y-radius·of·the·post-smoothing·window·is·(smoothy·*·image_height).··Here,·‘image_height’·is·the·image·height·after·binning.·If·negative,··the·default·values·are·used:·(100.0/2048)·for·blue·flat-field·frames,··(300.0/2048)·for·red·flat-field·frames,·(200.0/2048)·for·blue·science··frames·and·(500.0/2048)·for·red·science·frames.·(float;·default:·-1.0)·[default=-1.0].</p> | 329 | <dd><p>If·spline·interpolation·is·used·to·measure·the·background,·the··y-radius·of·the·post-smoothing·window·is·(smoothy·*·image_height).··Here,·‘image_height’·is·the·image·height·after·binning.·If·negative,··the·default·values·are·used:·(100.0/2048)·for·blue·flat-field·frames,··(300.0/2048)·for·red·flat-field·frames,·(200.0/2048)·for·blue·science··frames·and·(500.0/2048)·for·red·science·frames.·(float;·default:·-1.0)·[default=-1.0].</p> |
| 288 | </dd></dl> | 330 | </dd></dl> |
| 289 | <dl·class="attribute"> | ||
| 290 | <dt·id="uves_obs_scired.param.reduce.extract.method"> | ||
| 291 | <code·class="descclassname">uves_obs_scired.param.reduce.extract.</code><code·class="descname">method</code><a·class="headerlink"·href="#uves_obs_scired.param.reduce.extract.method"·title="Permalink·to·this·definition">¶</a></dt> | ||
| 292 | <dd><p>Extraction·method.·(2d/optimal·not·supported·by·uves_cal_wavecal,··weighted·supported·only·by·uves_cal_wavecal,·2d·not·supported·by··uves_cal_response)·(str;·default:·‘optimal’)·[default=”optimal”].</p> | ||
| 293 | </dd></dl> | ||
| 294 | <dl·class="attribute"> | ||
| 295 | <dt·id="uves_obs_scired.param.reduce.extract.kappa"> | ||
| 296 | <code·class="descclassname">uves_obs_scired.param.reduce.extract.</code><code·class="descname">kappa</code><a·class="headerlink"·href="#uves_obs_scired.param.reduce.extract.kappa"·title="Permalink·to·this·definition">¶</a></dt> | ||
| 297 | <dd><p>In·optimal·extraction·mode,·this·is·the·threshold·for·bad·(i.e.··hot/cold)·pixel·rejection.·If·a·pixel·deviates·more·than·kappa*sigma··(where·sigma·is·the·uncertainty·of·the·pixel·flux)·from·the·inferred··spatial·profile,·its·weight·is·set·to·zero.·Range:·[-1,100].·If·this··parameter·is·negative,·no·rejection·is·performed.·(float;·default:··10.0)·[default=10.0].</p> | ||
| 298 | </dd></dl> | ||
| 299 | <dl·class="attribute"> | ||
| 300 | <dt·id="uves_obs_scired.param.reduce.extract.chunk"> | ||
| 301 | <code·class="descclassname">uves_obs_scired.param.reduce.extract.</code><code·class="descname">chunk</code><a·class="headerlink"·href="#uves_obs_scired.param.reduce.extract.chunk"·title="Permalink·to·this·definition">¶</a></dt> | ||
| 302 | <dd><p>In·optimal·extraction·mode,·the·chunk·size·(in·pixels)·used·for··fitting·the·analytical·profile·(a·fit·of·the·analytical·profile·to··single·bins·would·suffer·from·low·statistics).·(int;·default:·32)·[default=32].</p> | ||
| 303 | </dd></dl> | ||
| 304 | <dl·class="attribute"> | ||
| 305 | <dt·id="uves_obs_scired.param.reduce.extract.profile"> | ||
| 306 | <code·class="descclassname">uves_obs_scired.param.reduce.extract.</code><code·class="descname">profile</code><a·class="headerlink"·href="#uves_obs_scired.param.reduce.extract.profile"·title="Permalink·to·this·definition">¶</a></dt> | ||
| 307 | <dd><p>In·optimal·extraction·mode,·the·kind·of·profile·to·use.·‘gauss’·gives··a·Gaussian·profile,·‘moffat’·gives·a·Moffat·profile·with·beta=4·and·a··possible·linear·sky·contribution.·‘virtual’·uses·a·virtual·resampling··algorithm·(i.e.·measures·and·uses·the·actual·object·profile).··‘constant’·assumes·a·constant·spatial·profile·and·allows·optimal··extraction·of·wavelength·calibration·frames.·‘auto’·will·automatically··select·the·best·method·based·on·the·estimated·S/N·of·the·object.·For··low·S/N,·‘moffat’·or·‘gauss’·are·recommended·(for·robustness).·For··high·S/N,·‘virtual’·is·recommended·(for·accuracy).·In·the·case·of··virtual·resampling,·a·precise·determination·of·the·order·positions·is··required;·therefore·the·order-definition·is·repeated·using·the··(assumed·non-low·S/N)·science·frame·(str;·default:·‘auto’)·[default=”auto”].</p> | ||
| 308 | </dd></dl> | ||
| 309 | <dl·class="attribute"> | ||
| 310 | <dt·id="uves_obs_scired.param.reduce.extract.skymethod"> | ||
| 311 | <code·class="descclassname">uves_obs_scired.param.reduce.extract.</code><code·class="descname">skymethod</code><a·class="headerlink"·href="#uves_obs_scired.param.reduce.extract.skymethod"·title="Permalink·to·this·definition">¶</a></dt> | ||
| 312 | <dd><p>In·optimal·extraction·mode,·the·sky·subtraction·method·to·use.··‘median’·estimates·the·sky·as·the·median·of·pixels·along·the·slit··(ignoring·pixels·close·to·the·object),·whereas·‘optimal’·does·a·chi··square·minimization·along·the·slit·to·obtain·the·best·combined·object··and·sky·levels.·The·optimal·method·gives·the·most·accurate·sky··determination·but·is·also·a·bit·slower·than·the·median·method·(str;··default:·‘optimal’)·[default=”optimal”].</p> | ||
| 313 | </dd></dl> | ||
| 314 | <dl·class="attribute"> | ||
| 315 | <dt·id="uves_obs_scired.param.reduce.extract.oversample"> | ||
| 316 | <code·class="descclassname">uves_obs_scired.param.reduce.extract.</code><code·class="descname">oversample</code><a·class="headerlink"·href="#uves_obs_scired.param.reduce.extract.oversample"·title="Permalink·to·this·definition">¶</a></dt> | ||
| 317 | <dd><p>The·oversampling·factor·used·for·the·virtual·resampling·algorithm.·If··negative,·the·value·5·is·used·for·S/N·<=200,·and·the·value·10·is·used··if·the·estimated·S/N·is·>·200·(int;·default:·-1)·[default=-1].</p> | ||
| 318 | </dd></dl> | ||
| 319 | <dl·class="attribute"> | ||
| 320 | <dt·id="uves_obs_scired.param.reduce.extract.best"> | ||
| 321 | <code·class="descclassname">uves_obs_scired.param.reduce.extract.</code><code·class="descname">best</code><a·class="headerlink"·href="#uves_obs_scired.param.reduce.extract.best"·title="Permalink·to·this·definition">¶</a></dt> | ||
| 322 | <dd><p>(optimal·extraction·only)·If·false·(fastest),·the·spectrum·is··extracted·only·once.·If·true·(best),·the·spectrum·is·extracted·twice,··the·second·time·using·improved·variance·estimates·based·on·the·first··iteration.·Better·variance·estimates·slightly·improve·the·obtained··signal·to·noise·but·at·the·cost·of·increased·execution·time·(bool;··default:·True)·[default=True].</p> | ||
| 323 | </dd></dl> | ||
| 324 | <p>The·following·code·snippet·shows·the·default·settings·for·the·available | 331 | <p>The·following·code·snippet·shows·the·default·settings·for·the·available |
| 325 | parameters.</p> | 332 | parameters.</p> |
| 326 | <div·class="highlight-default·notranslate"><div·class="highlight"><pre><span></span><span·class="kn">import</span>·<span·class="nn">cpl</span> | 333 | <div·class="highlight-default·notranslate"><div·class="highlight"><pre><span></span><span·class="kn">import</span>·<span·class="nn">cpl</span> |
| 327 | <span·class="n">uves_obs_scired</span>·<span·class="o">=</span>·<span·class="n">cpl</span><span·class="o">.</span><span·class="n">Recipe</span><span·class="p">(</span><span·class="s2">"uves_obs_scired"</span><span·class="p">)</span> | 334 | <span·class="n">uves_obs_scired</span>·<span·class="o">=</span>·<span·class="n">cpl</span><span·class="o">.</span><span·class="n">Recipe</span><span·class="p">(</span><span·class="s2">"uves_obs_scired"</span><span·class="p">)</span> |
| 328 | <span·class="n">uves_obs_scired</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">debug</span>·<span·class="o">=</span>·<span·class="kc">False</span> | 335 | <span·class="n">uves_obs_scired</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">debug</span>·<span·class="o">=</span>·<span·class="kc">False</span> |
| 329 | <span·class="n">uves_obs_scired</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">plotter</span>·<span·class="o">=</span>·<span·class="s2">"no"</span> | 336 | <span·class="n">uves_obs_scired</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">plotter</span>·<span·class="o">=</span>·<span·class="s2">"no"</span> |
| Offset 344, 29 lines modified | Offset 344, 29 lines modified | ||
| 344 | <span·class="n">uves_obs_scired</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">reduce</span><span·class="o">.</span><span·class="n">objoffset</span>·<span·class="o">=</span>·<span·class="mf">0.0</span> | 344 | <span·class="n">uves_obs_scired</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">reduce</span><span·class="o">.</span><span·class="n">objoffset</span>·<span·class="o">=</span>·<span·class="mf">0.0</span> |
| 345 | <span·class="n">uves_obs_scired</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">reduce</span><span·class="o">.</span><span·class="n">objslit</span>·<span·class="o">=</span>·<span·class="o">-</span><span·class="mf">1.0</span> | 345 | <span·class="n">uves_obs_scired</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">reduce</span><span·class="o">.</span><span·class="n">objslit</span>·<span·class="o">=</span>·<span·class="o">-</span><span·class="mf">1.0</span> |
| 346 | <span·class="n">uves_obs_scired</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">reduce</span><span·class="o">.</span><span·class="n">tiltcorr</span>·<span·class="o">=</span>·<span·class="kc">True</span> | 346 | <span·class="n">uves_obs_scired</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">reduce</span><span·class="o">.</span><span·class="n">tiltcorr</span>·<span·class="o">=</span>·<span·class="kc">True</span> |
| 347 | <span·class="n">uves_obs_scired</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">reduce</span><span·class="o">.</span><span·class="n">ffmethod</span>·<span·class="o">=</span>·<span·class="s2">"extract"</span> | 347 | <span·class="n">uves_obs_scired</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">reduce</span><span·class="o">.</span><span·class="n">ffmethod</span>·<span·class="o">=</span>·<span·class="s2">"extract"</span> |
| 348 | <span·class="n">uves_obs_scired</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">reduce</span><span·class="o">.</span><span·class="n">merge</span>·<span·class="o">=</span>·<span·class="s2">"optimal"</span> | 348 | <span·class="n">uves_obs_scired</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">reduce</span><span·class="o">.</span><span·class="n">merge</span>·<span·class="o">=</span>·<span·class="s2">"optimal"</span> |
| 349 | <span·class="n">uves_obs_scired</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">reduce</span><span·class="o">.</span><span·class="n">merge_delt1</span>·<span·class="o">=</span>·<span·class="mf">0.0</span> | 349 | <span·class="n">uves_obs_scired</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">reduce</span><span·class="o">.</span><span·class="n">merge_delt1</span>·<span·class="o">=</span>·<span·class="mf">0.0</span> |
| 350 | <span·class="n">uves_obs_scired</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">reduce</span><span·class="o">.</span><span·class="n">merge_delt2</span>·<span·class="o">=</span>·<span·class="mf">0.0</span> | 350 | <span·class="n">uves_obs_scired</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">reduce</span><span·class="o">.</span><span·class="n">merge_delt2</span>·<span·class="o">=</span>·<span·class="mf">0.0</span> |
| 351 | <span·class="n">uves_obs_scired</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">reduce</span><span·class="o">.</span><span·class="n">extract</span><span·class="o">.</span><span·class="n">method</span>·<span·class="o">=</span>·<span·class="s2">"optimal"</span> | ||
| 352 | <span·class="n">uves_obs_scired</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">reduce</span><span·class="o">.</span><span·class="n">extract</span><span·class="o">.</span><span·class="n">kappa</span>·<span·class="o">=</span>·<span·class="mf">10.0</span> | ||
| 353 | <span·class="n">uves_obs_scired</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">reduce</span><span·class="o">.</span><span·class="n">extract</span><span·class="o">.</span><span·class="n">chunk</span>·<span·class="o">=</span>·<span·class="mi">32</span> | ||
| 354 | <span·class="n">uves_obs_scired</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">reduce</span><span·class="o">.</span><span·class="n">extract</span><span·class="o">.</span><span·class="n">profile</span>·<span·class="o">=</span>·<span·class="s2">"auto"</span> | ||
| 355 | <span·class="n">uves_obs_scired</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">reduce</span><span·class="o">.</span><span·class="n">extract</span><span·class="o">.</span><span·class="n">skymethod</span>·<span·class="o">=</span>·<span·class="s2">"optimal"</span> | ||
| 356 | <span·class="n">uves_obs_scired</span><span·class="o">.</span><span·class="n">param</span><span·class="o">.</span><span·class="n">reduce</span><span·class="o">.</span><span·class="n">extract</span><span·class="o">.</span><span·class="n">oversample</span>·<span·class="o">=</span>·<span·class="o">-</span><span·class="mi">1</span> | ||
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| Offset 185, 14 lines modified | Offset 185, 27 lines modified | ||
| 185 | file·is·\fBflames_cal_wavecal.calibrate.tolerance\fR·[default·=·\fI0.6\fR]. | 185 | file·is·\fBflames_cal_wavecal.calibrate.tolerance\fR·[default·=·\fI0.6\fR]. |
| 186 | .TP | 186 | .TP |
| 187 | \fB\-\-kappa\fR·\fI<float>\fR | 187 | \fB\-\-kappa\fR·\fI<float>\fR |
| 188 | Lines·with·residuals·more·then·kappa·stdev·are·rejected·from·the·final | 188 | Lines·with·residuals·more·then·kappa·stdev·are·rejected·from·the·final |
| 189 | fit·(float;·default:·4.0).·The·full·name·of·this·option·for·the·EsoRex·configuration | 189 | fit·(float;·default:·4.0).·The·full·name·of·this·option·for·the·EsoRex·configuration |
| 190 | file·is·\fBflames_cal_wavecal.calibrate.kappa\fR·[default·=·\fI4.0\fR]. | 190 | file·is·\fBflames_cal_wavecal.calibrate.kappa\fR·[default·=·\fI4.0\fR]. |
| 191 | .TP | 191 | .TP |
| 192 | \fB\-\-rebin.wavestep\fR·\fI<float>\fR | ||
| 193 | The·bin·size·(in·w.l.u.)·in·wavelength·space.·If·negative,·a·step·size | ||
| 194 | of·2/3·*·(·average·pixel·size·)·is·used.·(float;·default:·\-1.0).·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
| 195 | file·is·\fBflames_cal_wavecal.rebin.wavestep\fR·[default·=·\fI\-1.0\fR]. | ||
| 196 | .TP | ||
| 197 | \fB\-\-rebin.scale\fR·\fI<bool>\fR | ||
| 198 | Whether·or·not·to·multiply·by·the·factor·dx/dlambda·(pixels·per | ||
| 199 | wavelength)·during·the·rebinning.·This·option·is·disabled·as·default | ||
| 200 | in·concordance·with·the·method·used·in·the·MIDAS·pipeline.·This·option | ||
| 201 | should·be·set·to·true·to·convert·the·observed·flux·(in·pixel\-space)·to | ||
| 202 | a·flux·per·wavelength·(in·wavelength\-space).·(bool;·default:·False).·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
| 203 | file·is·\fBflames_cal_wavecal.rebin.scale\fR·[default·=·\fIFalse\fR]. | ||
| 204 | .TP | ||
| 192 | \fB\-\-extract.method\fR·\fI<str>\fR | 205 | \fB\-\-extract.method\fR·\fI<str>\fR |
| 193 | Extraction·method.·(2d/optimal·not·supported·by·uves_cal_wavecal, | 206 | Extraction·method.·(2d/optimal·not·supported·by·uves_cal_wavecal, |
| 194 | weighted·supported·only·by·uves_cal_wavecal,·2d·not·supported·by | 207 | weighted·supported·only·by·uves_cal_wavecal,·2d·not·supported·by |
| 195 | uves_cal_response)·(str;·default:·\'average\').·The·full·name·of·this·option·for·the·EsoRex·configuration | 208 | uves_cal_response)·(str;·default:·\'average\').·The·full·name·of·this·option·for·the·EsoRex·configuration |
| 196 | file·is·\fBflames_cal_wavecal.extract.method\fR·[default·=·\fIaverage\fR]. | 209 | file·is·\fBflames_cal_wavecal.extract.method\fR·[default·=·\fIaverage\fR]. |
| 197 | .TP | 210 | .TP |
| 198 | \fB\-\-extract.kappa\fR·\fI<float>\fR | 211 | \fB\-\-extract.kappa\fR·\fI<float>\fR |
| Offset 245, 27 lines modified | Offset 258, 14 lines modified | ||
| 245 | (optimal·extraction·only)·If·false·(fastest),·the·spectrum·is | 258 | (optimal·extraction·only)·If·false·(fastest),·the·spectrum·is |
| 246 | extracted·only·once.·If·true·(best),·the·spectrum·is·extracted·twice, | 259 | extracted·only·once.·If·true·(best),·the·spectrum·is·extracted·twice, |
| 247 | the·second·time·using·improved·variance·estimates·based·on·the·first | 260 | the·second·time·using·improved·variance·estimates·based·on·the·first |
| 248 | iteration.·Better·variance·estimates·slightly·improve·the·obtained | 261 | iteration.·Better·variance·estimates·slightly·improve·the·obtained |
| 249 | signal·to·noise·but·at·the·cost·of·increased·execution·time·(bool; | 262 | signal·to·noise·but·at·the·cost·of·increased·execution·time·(bool; |
| 250 | default:·True).·The·full·name·of·this·option·for·the·EsoRex·configuration | 263 | default:·True).·The·full·name·of·this·option·for·the·EsoRex·configuration |
| 251 | file·is·\fBflames_cal_wavecal.extract.best\fR·[default·=·\fITrue\fR]. | 264 | file·is·\fBflames_cal_wavecal.extract.best\fR·[default·=·\fITrue\fR]. |
| 252 | .TP | ||
| 253 | \fB\-\-rebin.wavestep\fR·\fI<float>\fR | ||
| 254 | The·bin·size·(in·w.l.u.)·in·wavelength·space.·If·negative,·a·step·size | ||
| 255 | of·2/3·*·(·average·pixel·size·)·is·used.·(float;·default:·\-1.0).·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
| 256 | file·is·\fBflames_cal_wavecal.rebin.wavestep\fR·[default·=·\fI\-1.0\fR]. | ||
| 257 | .TP | ||
| 258 | \fB\-\-rebin.scale\fR·\fI<bool>\fR | ||
| 259 | Whether·or·not·to·multiply·by·the·factor·dx/dlambda·(pixels·per | ||
| 260 | wavelength)·during·the·rebinning.·This·option·is·disabled·as·default | ||
| 261 | in·concordance·with·the·method·used·in·the·MIDAS·pipeline.·This·option | ||
| 262 | should·be·set·to·true·to·convert·the·observed·flux·(in·pixel\-space)·to | ||
| 263 | a·flux·per·wavelength·(in·wavelength\-space).·(bool;·default:·False).·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
| 264 | file·is·\fBflames_cal_wavecal.rebin.scale\fR·[default·=·\fIFalse\fR]. | ||
| 265 | .PP | 265 | .PP |
| 266 | Note·that·it·is·possible·to·create·a·configuration·file·containing·these | 266 | Note·that·it·is·possible·to·create·a·configuration·file·containing·these |
| 267 | options,·along·with·suitable·default·values.·Please·refer·to·the·details | 267 | options,·along·with·suitable·default·values.·Please·refer·to·the·details |
| 268 | provided·by·the·'esorex·\-\-help'·command. | 268 | provided·by·the·'esorex·\-\-help'·command. |
| 269 | .SH·SEE·ALSO | 269 | .SH·SEE·ALSO |
| Offset 62, 155 lines modified | Offset 62, 14 lines modified | ||
| 62 | file·is·\fBuves.plotter\fR·[default·=·\fIno\fR]. | 62 | file·is·\fBuves.plotter\fR·[default·=·\fIno\fR]. |
| 63 | .TP | 63 | .TP |
| 64 | \fB\-\-process_chip\fR·\fI<str>\fR | 64 | \fB\-\-process_chip\fR·\fI<str>\fR |
| 65 | For·RED·arm·data·process·the·redl,·redu,·or·both·chip(s)·(str; | 65 | For·RED·arm·data·process·the·redl,·redu,·or·both·chip(s)·(str; |
| 66 | default:·\'both\').·The·full·name·of·this·option·for·the·EsoRex·configuration | 66 | default:·\'both\').·The·full·name·of·this·option·for·the·EsoRex·configuration |
| 67 | file·is·\fBuves.process_chip\fR·[default·=·\fIboth\fR]. | 67 | file·is·\fBuves.process_chip\fR·[default·=·\fIboth\fR]. |
| 68 | .TP | 68 | .TP |
| 69 | \fB\-\-uves_cal_mflat.norm_method\fR·\fI<str>\fR | ||
| 70 | Method·used·to·build·master·frame··(str;·default:·\'explevel\').·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
| 71 | file·is·\fBflames_obs_redchain.uves_cal_mflat.norm_method\fR·[default·=·\fIexplevel\fR]. | ||
| 72 | .TP | ||
| 73 | \fB\-\-uves_cal_mflat.backsub.mmethod\fR·\fI<str>\fR | ||
| 74 | Background·measuring·method.·If·equal·to·\'median\'·the·background·is | ||
| 75 | sampled·using·the·median·of·a·subwindow.·If·\'minimum\',·the·subwindow | ||
| 76 | minimum·value·is·used.·If·\'no\',·no·background·subtraction·is·done. | ||
| 77 | (str;·default:·\'median\').·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
| 78 | file·is·\fBflames_obs_redchain.uves_cal_mflat.backsub.mmethod\fR·[default·=·\fImedian\fR]. | ||
| 79 | .TP | ||
| 80 | \fB\-\-uves_cal_mflat.backsub.npoints\fR·\fI<int>\fR | ||
| 81 | This·is·the·number·of·columns·in·interorder·space·used·to·sample·the | ||
| 82 | background.·(int;·default:·82).·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
| 83 | file·is·\fBflames_obs_redchain.uves_cal_mflat.backsub.npoints\fR·[default·=·\fI82\fR]. | ||
| 84 | .TP | ||
| 85 | \fB\-\-uves_cal_mflat.backsub.radiusy\fR·\fI<int>\fR | ||
| 86 | The·height·(in·pixels)·of·the·background·sampling·window·is·(2*radiusy | ||
| 87 | +·1).·This·parameter·is·not·corrected·for·binning.·(int;·default:·2).·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
| 88 | file·is·\fBflames_obs_redchain.uves_cal_mflat.backsub.radiusy\fR·[default·=·\fI2\fR]. | ||
| 89 | .TP | ||
| 90 | \fB\-\-uves_cal_mflat.backsub.sdegree\fR·\fI<int>\fR | ||
| 91 | Degree·of·interpolating·splines.·Currently·only·degree·=·1·is | ||
| 92 | supported·(int;·default:·1).·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
| 93 | file·is·\fBflames_obs_redchain.uves_cal_mflat.backsub.sdegree\fR·[default·=·\fI1\fR]. | ||
| 94 | .TP | ||
| 95 | \fB\-\-uves_cal_mflat.backsub.smoothx\fR·\fI<float>\fR | ||
| 96 | If·spline·interpolation·is·used·to·measure·the·background,·the | ||
| 97 | x\-radius·of·the·post\-smoothing·window·is·(smoothx·*·image_width). | ||
| 98 | Here,·\'image_width\'·is·the·image·width·after·binning.·If·negative,·the | ||
| 99 | default·values·are·used:·(25.0/4096)·for·blue·flat\-field·frames, | ||
| 100 | (50.0/4096)·for·red·flat\-field·frames,·(300.0/4096)·for·blue·science | ||
| 101 | frames·and·(300.0/4096)·for·red·science·frames.·(float;·default:·\-1.0).·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
| 102 | file·is·\fBflames_obs_redchain.uves_cal_mflat.backsub.smoothx\fR·[default·=·\fI\-1.0\fR]. | ||
| 103 | .TP | ||
| 104 | \fB\-\-uves_cal_mflat.backsub.smoothy\fR·\fI<float>\fR | ||
| 105 | If·spline·interpolation·is·used·to·measure·the·background,·the | ||
| 106 | y\-radius·of·the·post\-smoothing·window·is·(smoothy·*·image_height). | ||
| 107 | Here,·\'image_height\'·is·the·image·height·after·binning.·If·negative, | ||
| 108 | the·default·values·are·used:·(100.0/2048)·for·blue·flat\-field·frames, | ||
| 109 | (300.0/2048)·for·red·flat\-field·frames,·(200.0/2048)·for·blue·science | ||
| 110 | frames·and·(500.0/2048)·for·red·science·frames.·(float;·default:·\-1.0).·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
| 111 | file·is·\fBflames_obs_redchain.uves_cal_mflat.backsub.smoothy\fR·[default·=·\fI\-1.0\fR]. | ||
| 112 | .TP | ||
| 113 | \fB\-\-uves_cal_mdark.stack_method\fR·\fI<str>\fR | ||
| 114 | Method·used·to·build·master·frame··(str;·default:·\'median\').·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
| 115 | file·is·\fBflames_obs_redchain.uves_cal_mdark.stack_method\fR·[default·=·\fImedian\fR]. | ||
| 116 | .TP | ||
| 117 | \fB\-\-uves_cal_mdark.klow\fR·\fI<float>\fR | ||
| 118 | Kappa·used·to·clip·low·level·values,·when·method·is·set·to·\'mean\' | ||
| 119 | (float;·default:·5.0).·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
| 120 | file·is·\fBflames_obs_redchain.uves_cal_mdark.klow\fR·[default·=·\fI5.0\fR]. | ||
| 121 | .TP | ||
| 122 | \fB\-\-uves_cal_mdark.khigh\fR·\fI<float>\fR | ||
| 123 | Kappa·used·to·clip·high·level·values,·when·method·is·set·to·\'mean\' | ||
| 124 | (float;·default:·5.0).·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
| 125 | file·is·\fBflames_obs_redchain.uves_cal_mdark.khigh\fR·[default·=·\fI5.0\fR]. | ||
| 126 | .TP | ||
| 127 | \fB\-\-uves_cal_mdark.niter\fR·\fI<int>\fR | ||
| 128 | Number·of·kappa·sigma·iterations,·when·method·is·set·to·\'mean\'··(int; | ||
| 129 | default:·5).·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
| 130 | file·is·\fBflames_obs_redchain.uves_cal_mdark.niter\fR·[default·=·\fI5\fR]. | ||
| 131 | .TP | ||
| 132 | \fB\-\-uves_cal_mdark.stack_method\fR·\fI<str>\fR | ||
| 133 | Method·used·to·build·master·frame··(str;·default:·\'median\').·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
| 134 | file·is·\fBflames_obs_redchain.uves_cal_mdark.stack_method\fR·[default·=·\fImedian\fR]. | ||
| 135 | .TP | ||
| 136 | \fB\-\-uves_cal_mdark.klow\fR·\fI<float>\fR | ||
| 137 | Kappa·used·to·clip·low·level·values,·when·method·is·set·to·\'mean\' | ||
| 138 | (float;·default:·5.0).·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
| 139 | file·is·\fBflames_obs_redchain.uves_cal_mdark.klow\fR·[default·=·\fI5.0\fR]. | ||
| 140 | .TP | ||
| 141 | \fB\-\-uves_cal_mdark.khigh\fR·\fI<float>\fR | ||
| 142 | Kappa·used·to·clip·high·level·values,·when·method·is·set·to·\'mean\' | ||
| 143 | (float;·default:·5.0).·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
| 144 | file·is·\fBflames_obs_redchain.uves_cal_mdark.khigh\fR·[default·=·\fI5.0\fR]. | ||
| 145 | .TP | ||
| 146 | \fB\-\-uves_cal_mdark.niter\fR·\fI<int>\fR | ||
| 147 | Number·of·kappa·sigma·iterations,·when·method·is·set·to·\'mean\'··(int; | ||
| 148 | default:·5).·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
| 149 | file·is·\fBflames_obs_redchain.uves_cal_mdark.niter\fR·[default·=·\fI5\fR]. | ||
| 150 | .TP | ||
| 151 | \fB\-\-uves_cal_mdark.qc_dark.reg.num_x\fR·\fI<int>\fR | ||
| 152 | Number·of·regions·along·the·X·axis·(where·mean/med/rms·are·computed). | ||
| 153 | (int;·default:·4).·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
| 154 | file·is·\fBflames_obs_redchain.uves_cal_mdark.qc_dark.reg.num_x\fR·[default·=·\fI4\fR]. | ||
| 155 | .TP | ||
| 156 | \fB\-\-uves_cal_mdark.qc_dark.reg.num_y\fR·\fI<int>\fR | ||
| 157 | Number·of·regions·along·the·Y·axis(where·mean/med/rms·are·computed). | ||
| 158 | (int;·default:·4).·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
| 159 | file·is·\fBflames_obs_redchain.uves_cal_mdark.qc_dark.reg.num_y\fR·[default·=·\fI4\fR]. | ||
| 160 | .TP | ||
| 161 | \fB\-\-uves_cal_mdark.qc_dark.reg.box_sx\fR·\fI<int>\fR | ||
| 162 | Region·X·size·[pix]·(int;·default:·100).·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
| 163 | file·is·\fBflames_obs_redchain.uves_cal_mdark.qc_dark.reg.box_sx\fR·[default·=·\fI100\fR]. | ||
| 164 | .TP | ||
| 165 | \fB\-\-uves_cal_mdark.qc_dark.reg.box_sy\fR·\fI<int>\fR | ||
| 166 | Region·Y·size·[pix]·(int;·default:·100).·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
| 167 | file·is·\fBflames_obs_redchain.uves_cal_mdark.qc_dark.reg.box_sy\fR·[default·=·\fI100\fR]. | ||
| 168 | .TP | ||
| 169 | \fB\-\-uves_cal_mdark.qc_dark.reg.border_x\fR·\fI<int>\fR | ||
| 170 | X·distance·between·the·left·hand·side·of·the·detector·and·the·left | ||
| 171 | hand·side·of·the·region·[pix]·(int;·default:·100).·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
| 172 | file·is·\fBflames_obs_redchain.uves_cal_mdark.qc_dark.reg.border_x\fR·[default·=·\fI100\fR]. | ||
| 173 | .TP | ||
| 174 | \fB\-\-uves_cal_mdark.qc_dark.reg.border_y\fR·\fI<int>\fR | ||
| 175 | X·distance·between·the·left·hand·side·of·the·detector·and·the·left | ||
| 176 | hand·side·of·the·region·[pix]·(int;·default:·100).·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
| 177 | file·is·\fBflames_obs_redchain.uves_cal_mdark.qc_dark.reg.border_y\fR·[default·=·\fI100\fR]. | ||
| 178 | .TP | ||
| 179 | \fB\-\-uves_cal_mdark.qc_dark.reg.when\fR·\fI<int>\fR | ||
| 180 | When·QC·analysis·is·performed.·0:·on·each·raw·frame·or·1:·on·the | ||
| 181 | master·frame·(int;·default:·0).·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
| 182 | file·is·\fBflames_obs_redchain.uves_cal_mdark.qc_dark.reg.when\fR·[default·=·\fI0\fR]. | ||
| 183 | .TP | ||
| 184 | \fB\-\-uves_cal_mbias.clean_traps\fR·\fI<bool>\fR | ||
| 185 | Clean·detector·traps.·If·TRUE·detector·traps·are·interpolated.The·bad | ||
| 186 | pixels·are·replaced·by·the·average·of·thenearest·good·pixels·in·the | ||
| 187 | same·column,·or·simply·marked·as·bad.·The·positions·of·bad·pixels·are | ||
| 188 | hard\-coded·(as·function·of·UVES·chip).·(bool;·default:·False).·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
| Max diff block lines reached; 35656/44813 bytes (79.57%) of diff not shown. | |||
| Offset 105, 14 lines modified | Offset 105, 47 lines modified | ||
| 105 | hard\-coded·(as·function·of·UVES·chip).·(bool;·default:·False).·The·full·name·of·this·option·for·the·EsoRex·configuration | 105 | hard\-coded·(as·function·of·UVES·chip).·(bool;·default:·False).·The·full·name·of·this·option·for·the·EsoRex·configuration |
| 106 | file·is·\fBuves_cal_mkmaster.clean_traps\fR·[default·=·\fIFalse\fR]. | 106 | file·is·\fBuves_cal_mkmaster.clean_traps\fR·[default·=·\fIFalse\fR]. |
| 107 | .TP | 107 | .TP |
| 108 | \fB\-\-norm_method\fR·\fI<str>\fR | 108 | \fB\-\-norm_method\fR·\fI<str>\fR |
| 109 | Method·used·to·build·master·frame··(str;·default:·\'explevel\').·The·full·name·of·this·option·for·the·EsoRex·configuration | 109 | Method·used·to·build·master·frame··(str;·default:·\'explevel\').·The·full·name·of·this·option·for·the·EsoRex·configuration |
| 110 | file·is·\fBuves_cal_mkmaster.norm_method\fR·[default·=·\fIexplevel\fR]. | 110 | file·is·\fBuves_cal_mkmaster.norm_method\fR·[default·=·\fIexplevel\fR]. |
| 111 | .TP | 111 | .TP |
| 112 | \fB\-\-qc_dark.reg.num_x\fR·\fI<int>\fR | ||
| 113 | Number·of·regions·along·the·X·axis·(where·mean/med/rms·are·computed). | ||
| 114 | (int;·default:·4).·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
| 115 | file·is·\fBuves_cal_mkmaster.qc_dark.reg.num_x\fR·[default·=·\fI4\fR]. | ||
| 116 | .TP | ||
| 117 | \fB\-\-qc_dark.reg.num_y\fR·\fI<int>\fR | ||
| 118 | Number·of·regions·along·the·Y·axis(where·mean/med/rms·are·computed). | ||
| 119 | (int;·default:·4).·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
| 120 | file·is·\fBuves_cal_mkmaster.qc_dark.reg.num_y\fR·[default·=·\fI4\fR]. | ||
| 121 | .TP | ||
| 122 | \fB\-\-qc_dark.reg.box_sx\fR·\fI<int>\fR | ||
| 123 | Region·X·size·[pix]·(int;·default:·100).·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
| 124 | file·is·\fBuves_cal_mkmaster.qc_dark.reg.box_sx\fR·[default·=·\fI100\fR]. | ||
| 125 | .TP | ||
| 126 | \fB\-\-qc_dark.reg.box_sy\fR·\fI<int>\fR | ||
| 127 | Region·Y·size·[pix]·(int;·default:·100).·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
| 128 | file·is·\fBuves_cal_mkmaster.qc_dark.reg.box_sy\fR·[default·=·\fI100\fR]. | ||
| 129 | .TP | ||
| 130 | \fB\-\-qc_dark.reg.border_x\fR·\fI<int>\fR | ||
| 131 | X·distance·between·the·left·hand·side·of·the·detector·and·the·left | ||
| 132 | hand·side·of·the·region·[pix]·(int;·default:·100).·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
| 133 | file·is·\fBuves_cal_mkmaster.qc_dark.reg.border_x\fR·[default·=·\fI100\fR]. | ||
| 134 | .TP | ||
| 135 | \fB\-\-qc_dark.reg.border_y\fR·\fI<int>\fR | ||
| 136 | X·distance·between·the·left·hand·side·of·the·detector·and·the·left | ||
| 137 | hand·side·of·the·region·[pix]·(int;·default:·100).·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
| 138 | file·is·\fBuves_cal_mkmaster.qc_dark.reg.border_y\fR·[default·=·\fI100\fR]. | ||
| 139 | .TP | ||
| 140 | \fB\-\-qc_dark.reg.when\fR·\fI<int>\fR | ||
| 141 | When·QC·analysis·is·performed.·0:·on·each·raw·frame·or·1:·on·the | ||
| 142 | master·frame·(int;·default:·0).·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
| 143 | file·is·\fBuves_cal_mkmaster.qc_dark.reg.when\fR·[default·=·\fI0\fR]. | ||
| 144 | .TP | ||
| 112 | \fB\-\-backsub.mmethod\fR·\fI<str>\fR | 145 | \fB\-\-backsub.mmethod\fR·\fI<str>\fR |
| 113 | Background·measuring·method.·If·equal·to·\'median\'·the·background·is | 146 | Background·measuring·method.·If·equal·to·\'median\'·the·background·is |
| 114 | sampled·using·the·median·of·a·subwindow.·If·\'minimum\',·the·subwindow | 147 | sampled·using·the·median·of·a·subwindow.·If·\'minimum\',·the·subwindow |
| 115 | minimum·value·is·used.·If·\'no\',·no·background·subtraction·is·done. | 148 | minimum·value·is·used.·If·\'no\',·no·background·subtraction·is·done. |
| 116 | (str;·default:·\'median\').·The·full·name·of·this·option·for·the·EsoRex·configuration | 149 | (str;·default:·\'median\').·The·full·name·of·this·option·for·the·EsoRex·configuration |
| 117 | file·is·\fBuves_cal_mkmaster.backsub.mmethod\fR·[default·=·\fImedian\fR]. | 150 | file·is·\fBuves_cal_mkmaster.backsub.mmethod\fR·[default·=·\fImedian\fR]. |
| 118 | .TP | 151 | .TP |
| Offset 144, 47 lines modified | Offset 177, 14 lines modified | ||
| 144 | If·spline·interpolation·is·used·to·measure·the·background,·the | 177 | If·spline·interpolation·is·used·to·measure·the·background,·the |
| 145 | y\-radius·of·the·post\-smoothing·window·is·(smoothy·*·image_height). | 178 | y\-radius·of·the·post\-smoothing·window·is·(smoothy·*·image_height). |
| 146 | Here,·\'image_height\'·is·the·image·height·after·binning.·If·negative, | 179 | Here,·\'image_height\'·is·the·image·height·after·binning.·If·negative, |
| 147 | the·default·values·are·used:·(100.0/2048)·for·blue·flat\-field·frames, | 180 | the·default·values·are·used:·(100.0/2048)·for·blue·flat\-field·frames, |
| 148 | (300.0/2048)·for·red·flat\-field·frames,·(200.0/2048)·for·blue·science | 181 | (300.0/2048)·for·red·flat\-field·frames,·(200.0/2048)·for·blue·science |
| 149 | frames·and·(500.0/2048)·for·red·science·frames.·(float;·default:·\-1.0).·The·full·name·of·this·option·for·the·EsoRex·configuration | 182 | frames·and·(500.0/2048)·for·red·science·frames.·(float;·default:·\-1.0).·The·full·name·of·this·option·for·the·EsoRex·configuration |
| 150 | file·is·\fBuves_cal_mkmaster.backsub.smoothy\fR·[default·=·\fI\-1.0\fR]. | 183 | file·is·\fBuves_cal_mkmaster.backsub.smoothy\fR·[default·=·\fI\-1.0\fR]. |
| 151 | .TP | ||
| 152 | \fB\-\-qc_dark.reg.num_x\fR·\fI<int>\fR | ||
| 153 | Number·of·regions·along·the·X·axis·(where·mean/med/rms·are·computed). | ||
| 154 | (int;·default:·4).·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
| 155 | file·is·\fBuves_cal_mkmaster.qc_dark.reg.num_x\fR·[default·=·\fI4\fR]. | ||
| 156 | .TP | ||
| 157 | \fB\-\-qc_dark.reg.num_y\fR·\fI<int>\fR | ||
| 158 | Number·of·regions·along·the·Y·axis(where·mean/med/rms·are·computed). | ||
| 159 | (int;·default:·4).·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
| 160 | file·is·\fBuves_cal_mkmaster.qc_dark.reg.num_y\fR·[default·=·\fI4\fR]. | ||
| 161 | .TP | ||
| 162 | \fB\-\-qc_dark.reg.box_sx\fR·\fI<int>\fR | ||
| 163 | Region·X·size·[pix]·(int;·default:·100).·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
| 164 | file·is·\fBuves_cal_mkmaster.qc_dark.reg.box_sx\fR·[default·=·\fI100\fR]. | ||
| 165 | .TP | ||
| 166 | \fB\-\-qc_dark.reg.box_sy\fR·\fI<int>\fR | ||
| 167 | Region·Y·size·[pix]·(int;·default:·100).·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
| 168 | file·is·\fBuves_cal_mkmaster.qc_dark.reg.box_sy\fR·[default·=·\fI100\fR]. | ||
| 169 | .TP | ||
| 170 | \fB\-\-qc_dark.reg.border_x\fR·\fI<int>\fR | ||
| 171 | X·distance·between·the·left·hand·side·of·the·detector·and·the·left | ||
| 172 | hand·side·of·the·region·[pix]·(int;·default:·100).·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
| 173 | file·is·\fBuves_cal_mkmaster.qc_dark.reg.border_x\fR·[default·=·\fI100\fR]. | ||
| 174 | .TP | ||
| 175 | \fB\-\-qc_dark.reg.border_y\fR·\fI<int>\fR | ||
| 176 | X·distance·between·the·left·hand·side·of·the·detector·and·the·left | ||
| 177 | hand·side·of·the·region·[pix]·(int;·default:·100).·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
| 178 | file·is·\fBuves_cal_mkmaster.qc_dark.reg.border_y\fR·[default·=·\fI100\fR]. | ||
| 179 | .TP | ||
| 180 | \fB\-\-qc_dark.reg.when\fR·\fI<int>\fR | ||
| 181 | When·QC·analysis·is·performed.·0:·on·each·raw·frame·or·1:·on·the | ||
| 182 | master·frame·(int;·default:·0).·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
| 183 | file·is·\fBuves_cal_mkmaster.qc_dark.reg.when\fR·[default·=·\fI0\fR]. | ||
| 184 | .PP | 184 | .PP |
| 185 | Note·that·it·is·possible·to·create·a·configuration·file·containing·these | 185 | Note·that·it·is·possible·to·create·a·configuration·file·containing·these |
| 186 | options,·along·with·suitable·default·values.·Please·refer·to·the·details | 186 | options,·along·with·suitable·default·values.·Please·refer·to·the·details |
| 187 | provided·by·the·'esorex·\-\-help'·command. | 187 | provided·by·the·'esorex·\-\-help'·command. |
| 188 | .SH·SEE·ALSO | 188 | .SH·SEE·ALSO |
| Offset 68, 46 lines modified | Offset 68, 14 lines modified | ||
| 68 | .TP | 68 | .TP |
| 69 | \fB\-\-paccuracy\fR·\fI<float>\fR | 69 | \fB\-\-paccuracy\fR·\fI<float>\fR |
| 70 | The·pointing·accuracy·(in·arcseconds)·used·to·identify·the·observed | 70 | The·pointing·accuracy·(in·arcseconds)·used·to·identify·the·observed |
| 71 | star·with·a·catalogue·star.·If·the·angular·separation·is·less·than | 71 | star·with·a·catalogue·star.·If·the·angular·separation·is·less·than |
| 72 | this·number,·the·identification·is·made.·(float;·default:·60.0).·The·full·name·of·this·option·for·the·EsoRex·configuration | 72 | this·number,·the·identification·is·made.·(float;·default:·60.0).·The·full·name·of·this·option·for·the·EsoRex·configuration |
| 73 | file·is·\fBuves_cal_response.efficiency.paccuracy\fR·[default·=·\fI60.0\fR]. | 73 | file·is·\fBuves_cal_response.efficiency.paccuracy\fR·[default·=·\fI60.0\fR]. |
| 74 | .TP | 74 | .TP |
| 75 | \fB\-\-efficiency.reduce.ffmethod\fR·\fI<str>\fR | ||
| 76 | Flat\-fielding·method.·If·set·to·\'pixel\',·flat\-fielding·is·done·in | ||
| 77 | pixel\-pixel·space·(before·extraction);·if·set·to·\'extract\',·flat\- | ||
| 78 | fielding·is·performed·in·pixel\-order·space·(i.e.·after·extraction).·If | ||
| 79 | set·to·\'no\',·no·flat\-field·correction·is·done.·<pixel·|·extract·|·no> | ||
| 80 | (str;·default:·\'no\').·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
| 81 | file·is·\fBuves_cal_response.efficiency.reduce.ffmethod\fR·[default·=·\fIno\fR]. | ||
| 82 | .TP | ||
| 83 | \fB\-\-efficiency.reduce.merge\fR·\fI<str>\fR | ||
| 84 | Order·merging·method.·If·\'optimal\',·the·flux·in·the·overlapping·region | ||
| 85 | is·set·to·the·(optimally·computed,·using·the·uncertainties)·average·of | ||
| 86 | single·order·spectra.·If·\'sum\',·the·flux·in·the·overlapping·region·is | ||
| 87 | computed·as·the·sum·of·the·single·order·spectra.If·\'noappend\'·the | ||
| 88 | spectrum·is·simply·rebinned·but·not·merged.If·flat\-fielding·is·done, | ||
| 89 | method·\'optimal\'·is·recommended,·otherwise·\'sum\'.·<optimal·|·sum·| | ||
| 90 | noappend>·(str;·default:·\'sum\').·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
| 91 | file·is·\fBuves_cal_response.efficiency.reduce.merge\fR·[default·=·\fIsum\fR]. | ||
| 92 | .TP | ||
| 93 | \fB\-\-efficiency.reduce.best\fR·\fI<bool>\fR | ||
| 94 | (optimal·extraction·only)·If·false·(fastest),·the·spectrum·is | ||
| 95 | extracted·only·once.·If·true·(best),·the·spectrum·is·extracted·twice, | ||
| 96 | the·second·time·using·improved·variance·estimates·based·on·the·first | ||
| 97 | iteration.·Better·variance·estimates·slightly·improve·the·obtained | ||
| 98 | signal·to·noise·but·at·the·cost·of·increased·execution·time·(bool; | ||
| 99 | default:·True).·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
| 100 | file·is·\fBuves_cal_response.efficiency.reduce.best\fR·[default·=·\fITrue\fR]. | ||
| 101 | .TP | ||
| 102 | \fB\-\-efficiency.reduce.extract.method\fR·\fI<str>\fR | ||
| 103 | Extraction·method.·<average·|·linear·|·weighted·|·optimal>·(str; | ||
| 104 | default:·\'linear\').·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
| 105 | file·is·\fBuves_cal_response.efficiency.reduce.extract.method\fR·[default·=·\fIlinear\fR]. | ||
| 106 | .TP | ||
| 107 | \fB\-\-reduce.slitlength\fR·\fI<float>\fR | 75 | \fB\-\-reduce.slitlength\fR·\fI<float>\fR |
| 108 | Extraction·slit·length·(in·pixels).·If·negative,·the·value·inferred | 76 | Extraction·slit·length·(in·pixels).·If·negative,·the·value·inferred |
| 109 | from·the·raw·frame·header·is·used·(float;·default:·\-1.0).·The·full·name·of·this·option·for·the·EsoRex·configuration | 77 | from·the·raw·frame·header·is·used·(float;·default:·\-1.0).·The·full·name·of·this·option·for·the·EsoRex·configuration |
| 110 | file·is·\fBuves_cal_response.reduce.slitlength\fR·[default·=·\fI\-1.0\fR]. | 78 | file·is·\fBuves_cal_response.reduce.slitlength\fR·[default·=·\fI\-1.0\fR]. |
| 111 | .TP | 79 | .TP |
| 112 | \fB\-\-reduce.skysub\fR·\fI<bool>\fR | 80 | \fB\-\-reduce.skysub\fR·\fI<bool>\fR |
| 113 | Do·sky\-subtraction·(only·applicable·to·linear·and·average | 81 | Do·sky\-subtraction·(only·applicable·to·linear·and·average |
| Offset 169, 27 lines modified | Offset 137, 14 lines modified | ||
| 169 | \fB\-\-reduce.merge_delt2\fR·\fI<float>\fR | 137 | \fB\-\-reduce.merge_delt2\fR·\fI<float>\fR |
| 170 | Order·merging·right·hand·(long·wavelength)·cut.·To·reduce·the·amount | 138 | Order·merging·right·hand·(long·wavelength)·cut.·To·reduce·the·amount |
| 171 | of·order·overlapping·regions·we·allow·to·cut·short·and·long·wavelength | 139 | of·order·overlapping·regions·we·allow·to·cut·short·and·long·wavelength |
| 172 | ranges.·This·may·reduce·the·ripple·possibly·introduced·by·the·order | 140 | ranges.·This·may·reduce·the·ripple·possibly·introduced·by·the·order |
| 173 | merging.·Suggested·values·is·4·(float;·default:·0.0).·The·full·name·of·this·option·for·the·EsoRex·configuration | 141 | merging.·Suggested·values·is·4·(float;·default:·0.0).·The·full·name·of·this·option·for·the·EsoRex·configuration |
| 174 | file·is·\fBuves_cal_response.reduce.merge_delt2\fR·[default·=·\fI0.0\fR]. | 142 | file·is·\fBuves_cal_response.reduce.merge_delt2\fR·[default·=·\fI0.0\fR]. |
| 175 | .TP | 143 | .TP |
| 176 | \fB\-\-reduce.rebin.wavestep\fR·\fI<float>\fR | ||
| 177 | The·bin·size·(in·w.l.u.)·in·wavelength·space.·If·negative,·a·step·size | ||
| 178 | of·2/3·*·(·average·pixel·size·)·is·used.·(float;·default:·\-1.0).·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
| 179 | file·is·\fBuves_cal_response.reduce.rebin.wavestep\fR·[default·=·\fI\-1.0\fR]. | ||
| 180 | .TP | ||
| 181 | \fB\-\-reduce.rebin.scale\fR·\fI<bool>\fR | ||
| 182 | Whether·or·not·to·multiply·by·the·factor·dx/dlambda·(pixels·per | ||
| 183 | wavelength)·during·the·rebinning.·This·option·is·disabled·as·default | ||
| 184 | in·concordance·with·the·method·used·in·the·MIDAS·pipeline.·This·option | ||
| 185 | should·be·set·to·true·to·convert·the·observed·flux·(in·pixel\-space)·to | ||
| 186 | a·flux·per·wavelength·(in·wavelength\-space).·(bool;·default:·False).·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
| 187 | file·is·\fBuves_cal_response.reduce.rebin.scale\fR·[default·=·\fIFalse\fR]. | ||
| 188 | .TP | ||
| 189 | \fB\-\-reduce.extract.method\fR·\fI<str>\fR | 144 | \fB\-\-reduce.extract.method\fR·\fI<str>\fR |
| 190 | Extraction·method.·(2d/optimal·not·supported·by·uves_cal_wavecal, | 145 | Extraction·method.·(2d/optimal·not·supported·by·uves_cal_wavecal, |
| 191 | weighted·supported·only·by·uves_cal_wavecal,·2d·not·supported·by | 146 | weighted·supported·only·by·uves_cal_wavecal,·2d·not·supported·by |
| 192 | uves_cal_response)·(str;·default:·\'optimal\').·The·full·name·of·this·option·for·the·EsoRex·configuration | 147 | uves_cal_response)·(str;·default:·\'optimal\').·The·full·name·of·this·option·for·the·EsoRex·configuration |
| 193 | file·is·\fBuves_cal_response.reduce.extract.method\fR·[default·=·\fIoptimal\fR]. | 148 | file·is·\fBuves_cal_response.reduce.extract.method\fR·[default·=·\fIoptimal\fR]. |
| 194 | .TP | 149 | .TP |
| 195 | \fB\-\-reduce.extract.kappa\fR·\fI<float>\fR | 150 | \fB\-\-reduce.extract.kappa\fR·\fI<float>\fR |
| Offset 282, 14 lines modified | Offset 237, 59 lines modified | ||
| 282 | If·spline·interpolation·is·used·to·measure·the·background,·the | 237 | If·spline·interpolation·is·used·to·measure·the·background,·the |
| 283 | y\-radius·of·the·post\-smoothing·window·is·(smoothy·*·image_height). | 238 | y\-radius·of·the·post\-smoothing·window·is·(smoothy·*·image_height). |
| 284 | Here,·\'image_height\'·is·the·image·height·after·binning.·If·negative, | 239 | Here,·\'image_height\'·is·the·image·height·after·binning.·If·negative, |
| 285 | the·default·values·are·used:·(100.0/2048)·for·blue·flat\-field·frames, | 240 | the·default·values·are·used:·(100.0/2048)·for·blue·flat\-field·frames, |
| 286 | (300.0/2048)·for·red·flat\-field·frames,·(200.0/2048)·for·blue·science | 241 | (300.0/2048)·for·red·flat\-field·frames,·(200.0/2048)·for·blue·science |
| 287 | frames·and·(500.0/2048)·for·red·science·frames.·(float;·default:·\-1.0).·The·full·name·of·this·option·for·the·EsoRex·configuration | 242 | frames·and·(500.0/2048)·for·red·science·frames.·(float;·default:·\-1.0).·The·full·name·of·this·option·for·the·EsoRex·configuration |
| 288 | file·is·\fBuves_cal_response.reduce.backsub.smoothy\fR·[default·=·\fI\-1.0\fR]. | 243 | file·is·\fBuves_cal_response.reduce.backsub.smoothy\fR·[default·=·\fI\-1.0\fR]. |
| 244 | .TP | ||
| 245 | \fB\-\-reduce.rebin.wavestep\fR·\fI<float>\fR | ||
| 246 | The·bin·size·(in·w.l.u.)·in·wavelength·space.·If·negative,·a·step·size | ||
| 247 | of·2/3·*·(·average·pixel·size·)·is·used.·(float;·default:·\-1.0).·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
| 248 | file·is·\fBuves_cal_response.reduce.rebin.wavestep\fR·[default·=·\fI\-1.0\fR]. | ||
| 249 | .TP | ||
| 250 | \fB\-\-reduce.rebin.scale\fR·\fI<bool>\fR | ||
| 251 | Whether·or·not·to·multiply·by·the·factor·dx/dlambda·(pixels·per | ||
| 252 | wavelength)·during·the·rebinning.·This·option·is·disabled·as·default | ||
| 253 | in·concordance·with·the·method·used·in·the·MIDAS·pipeline.·This·option | ||
| 254 | should·be·set·to·true·to·convert·the·observed·flux·(in·pixel\-space)·to | ||
| 255 | a·flux·per·wavelength·(in·wavelength\-space).·(bool;·default:·False).·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
| 256 | file·is·\fBuves_cal_response.reduce.rebin.scale\fR·[default·=·\fIFalse\fR]. | ||
| 257 | .TP | ||
| 258 | \fB\-\-efficiency.reduce.ffmethod\fR·\fI<str>\fR | ||
| 259 | Flat\-fielding·method.·If·set·to·\'pixel\',·flat\-fielding·is·done·in | ||
| 260 | pixel\-pixel·space·(before·extraction);·if·set·to·\'extract\',·flat\- | ||
| 261 | fielding·is·performed·in·pixel\-order·space·(i.e.·after·extraction).·If | ||
| 262 | set·to·\'no\',·no·flat\-field·correction·is·done.·<pixel·|·extract·|·no> | ||
| 263 | (str;·default:·\'no\').·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
| 264 | file·is·\fBuves_cal_response.efficiency.reduce.ffmethod\fR·[default·=·\fIno\fR]. | ||
| 265 | .TP | ||
| 266 | \fB\-\-efficiency.reduce.merge\fR·\fI<str>\fR | ||
| 267 | Order·merging·method.·If·\'optimal\',·the·flux·in·the·overlapping·region | ||
| 268 | is·set·to·the·(optimally·computed,·using·the·uncertainties)·average·of | ||
| 269 | single·order·spectra.·If·\'sum\',·the·flux·in·the·overlapping·region·is | ||
| 270 | computed·as·the·sum·of·the·single·order·spectra.If·\'noappend\'·the | ||
| 271 | spectrum·is·simply·rebinned·but·not·merged.If·flat\-fielding·is·done, | ||
| 272 | method·\'optimal\'·is·recommended,·otherwise·\'sum\'.·<optimal·|·sum·| | ||
| 273 | noappend>·(str;·default:·\'sum\').·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
| 274 | file·is·\fBuves_cal_response.efficiency.reduce.merge\fR·[default·=·\fIsum\fR]. | ||
| 275 | .TP | ||
| 276 | \fB\-\-efficiency.reduce.best\fR·\fI<bool>\fR | ||
| 277 | (optimal·extraction·only)·If·false·(fastest),·the·spectrum·is | ||
| 278 | extracted·only·once.·If·true·(best),·the·spectrum·is·extracted·twice, | ||
| 279 | the·second·time·using·improved·variance·estimates·based·on·the·first | ||
| 280 | iteration.·Better·variance·estimates·slightly·improve·the·obtained | ||
| 281 | signal·to·noise·but·at·the·cost·of·increased·execution·time·(bool; | ||
| 282 | default:·True).·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
| 283 | file·is·\fBuves_cal_response.efficiency.reduce.best\fR·[default·=·\fITrue\fR]. | ||
| 284 | .TP | ||
| 285 | \fB\-\-efficiency.reduce.extract.method\fR·\fI<str>\fR | ||
| 286 | Extraction·method.·<average·|·linear·|·weighted·|·optimal>·(str; | ||
| 287 | default:·\'linear\').·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
| 288 | file·is·\fBuves_cal_response.efficiency.reduce.extract.method\fR·[default·=·\fIlinear\fR]. | ||
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| Offset 159, 27 lines modified | Offset 159, 14 lines modified | ||
| 159 | \fB\-\-reduce.merge_delt2\fR·\fI<float>\fR | 159 | \fB\-\-reduce.merge_delt2\fR·\fI<float>\fR |
| 160 | Order·merging·right·hand·(long·wavelength)·cut.·To·reduce·the·amount | 160 | Order·merging·right·hand·(long·wavelength)·cut.·To·reduce·the·amount |
| 161 | of·order·overlapping·regions·we·allow·to·cut·short·and·long·wavelength | 161 | of·order·overlapping·regions·we·allow·to·cut·short·and·long·wavelength |
| 162 | ranges.·This·may·reduce·the·ripple·possibly·introduced·by·the·order | 162 | ranges.·This·may·reduce·the·ripple·possibly·introduced·by·the·order |
| 163 | merging.·Suggested·values·is·4·(float;·default:·0.0).·The·full·name·of·this·option·for·the·EsoRex·configuration | 163 | merging.·Suggested·values·is·4·(float;·default:·0.0).·The·full·name·of·this·option·for·the·EsoRex·configuration |
| 164 | file·is·\fBuves_cal_tflat.reduce.merge_delt2\fR·[default·=·\fI0.0\fR]. | 164 | file·is·\fBuves_cal_tflat.reduce.merge_delt2\fR·[default·=·\fI0.0\fR]. |
| 165 | .TP | 165 | .TP |
| 166 | \fB\-\-reduce.rebin.wavestep\fR·\fI<float>\fR | ||
| 167 | The·bin·size·(in·w.l.u.)·in·wavelength·space.·If·negative,·a·step·size | ||
| 168 | of·2/3·*·(·average·pixel·size·)·is·used.·(float;·default:·\-1.0).·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
| 169 | file·is·\fBuves_cal_tflat.reduce.rebin.wavestep\fR·[default·=·\fI\-1.0\fR]. | ||
| 170 | .TP | ||
| 171 | \fB\-\-reduce.rebin.scale\fR·\fI<bool>\fR | ||
| 172 | Whether·or·not·to·multiply·by·the·factor·dx/dlambda·(pixels·per | ||
| 173 | wavelength)·during·the·rebinning.·This·option·is·disabled·as·default | ||
| 174 | in·concordance·with·the·method·used·in·the·MIDAS·pipeline.·This·option | ||
| 175 | should·be·set·to·true·to·convert·the·observed·flux·(in·pixel\-space)·to | ||
| 176 | a·flux·per·wavelength·(in·wavelength\-space).·(bool;·default:·False).·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
| 177 | file·is·\fBuves_cal_tflat.reduce.rebin.scale\fR·[default·=·\fIFalse\fR]. | ||
| 178 | .TP | ||
| 179 | \fB\-\-reduce.extract.method\fR·\fI<str>\fR | 166 | \fB\-\-reduce.extract.method\fR·\fI<str>\fR |
| 180 | Extraction·method.·(2d/optimal·not·supported·by·uves_cal_wavecal, | 167 | Extraction·method.·(2d/optimal·not·supported·by·uves_cal_wavecal, |
| 181 | weighted·supported·only·by·uves_cal_wavecal,·2d·not·supported·by | 168 | weighted·supported·only·by·uves_cal_wavecal,·2d·not·supported·by |
| 182 | uves_cal_response)·(str;·default:·\'average\').·The·full·name·of·this·option·for·the·EsoRex·configuration | 169 | uves_cal_response)·(str;·default:·\'average\').·The·full·name·of·this·option·for·the·EsoRex·configuration |
| 183 | file·is·\fBuves_cal_tflat.reduce.extract.method\fR·[default·=·\fIaverage\fR]. | 170 | file·is·\fBuves_cal_tflat.reduce.extract.method\fR·[default·=·\fIaverage\fR]. |
| 184 | .TP | 171 | .TP |
| 185 | \fB\-\-reduce.extract.kappa\fR·\fI<float>\fR | 172 | \fB\-\-reduce.extract.kappa\fR·\fI<float>\fR |
| Offset 272, 14 lines modified | Offset 259, 27 lines modified | ||
| 272 | If·spline·interpolation·is·used·to·measure·the·background,·the | 259 | If·spline·interpolation·is·used·to·measure·the·background,·the |
| 273 | y\-radius·of·the·post\-smoothing·window·is·(smoothy·*·image_height). | 260 | y\-radius·of·the·post\-smoothing·window·is·(smoothy·*·image_height). |
| 274 | Here,·\'image_height\'·is·the·image·height·after·binning.·If·negative, | 261 | Here,·\'image_height\'·is·the·image·height·after·binning.·If·negative, |
| 275 | the·default·values·are·used:·(100.0/2048)·for·blue·flat\-field·frames, | 262 | the·default·values·are·used:·(100.0/2048)·for·blue·flat\-field·frames, |
| 276 | (300.0/2048)·for·red·flat\-field·frames,·(200.0/2048)·for·blue·science | 263 | (300.0/2048)·for·red·flat\-field·frames,·(200.0/2048)·for·blue·science |
| 277 | frames·and·(500.0/2048)·for·red·science·frames.·(float;·default:·\-1.0).·The·full·name·of·this·option·for·the·EsoRex·configuration | 264 | frames·and·(500.0/2048)·for·red·science·frames.·(float;·default:·\-1.0).·The·full·name·of·this·option·for·the·EsoRex·configuration |
| 278 | file·is·\fBuves_cal_tflat.reduce.backsub.smoothy\fR·[default·=·\fI\-1.0\fR]. | 265 | file·is·\fBuves_cal_tflat.reduce.backsub.smoothy\fR·[default·=·\fI\-1.0\fR]. |
| 266 | .TP | ||
| 267 | \fB\-\-reduce.rebin.wavestep\fR·\fI<float>\fR | ||
| 268 | The·bin·size·(in·w.l.u.)·in·wavelength·space.·If·negative,·a·step·size | ||
| 269 | of·2/3·*·(·average·pixel·size·)·is·used.·(float;·default:·\-1.0).·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
| 270 | file·is·\fBuves_cal_tflat.reduce.rebin.wavestep\fR·[default·=·\fI\-1.0\fR]. | ||
| 271 | .TP | ||
| 272 | \fB\-\-reduce.rebin.scale\fR·\fI<bool>\fR | ||
| 273 | Whether·or·not·to·multiply·by·the·factor·dx/dlambda·(pixels·per | ||
| 274 | wavelength)·during·the·rebinning.·This·option·is·disabled·as·default | ||
| 275 | in·concordance·with·the·method·used·in·the·MIDAS·pipeline.·This·option | ||
| 276 | should·be·set·to·true·to·convert·the·observed·flux·(in·pixel\-space)·to | ||
| 277 | a·flux·per·wavelength·(in·wavelength\-space).·(bool;·default:·False).·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
| 278 | file·is·\fBuves_cal_tflat.reduce.rebin.scale\fR·[default·=·\fIFalse\fR]. | ||
| 279 | .PP | 279 | .PP |
| 280 | Note·that·it·is·possible·to·create·a·configuration·file·containing·these | 280 | Note·that·it·is·possible·to·create·a·configuration·file·containing·these |
| 281 | options,·along·with·suitable·default·values.·Please·refer·to·the·details | 281 | options,·along·with·suitable·default·values.·Please·refer·to·the·details |
| 282 | provided·by·the·'esorex·\-\-help'·command. | 282 | provided·by·the·'esorex·\-\-help'·command. |
| 283 | .SH·SEE·ALSO | 283 | .SH·SEE·ALSO |
| Offset 187, 14 lines modified | Offset 187, 27 lines modified | ||
| 187 | file·is·\fBuves_cal_wavecal.calibrate.tolerance\fR·[default·=·\fI0.6\fR]. | 187 | file·is·\fBuves_cal_wavecal.calibrate.tolerance\fR·[default·=·\fI0.6\fR]. |
| 188 | .TP | 188 | .TP |
| 189 | \fB\-\-kappa\fR·\fI<float>\fR | 189 | \fB\-\-kappa\fR·\fI<float>\fR |
| 190 | Lines·with·residuals·more·then·kappa·stdev·are·rejected·from·the·final | 190 | Lines·with·residuals·more·then·kappa·stdev·are·rejected·from·the·final |
| 191 | fit·(float;·default:·4.0).·The·full·name·of·this·option·for·the·EsoRex·configuration | 191 | fit·(float;·default:·4.0).·The·full·name·of·this·option·for·the·EsoRex·configuration |
| 192 | file·is·\fBuves_cal_wavecal.calibrate.kappa\fR·[default·=·\fI4.0\fR]. | 192 | file·is·\fBuves_cal_wavecal.calibrate.kappa\fR·[default·=·\fI4.0\fR]. |
| 193 | .TP | 193 | .TP |
| 194 | \fB\-\-rebin.wavestep\fR·\fI<float>\fR | ||
| 195 | The·bin·size·(in·w.l.u.)·in·wavelength·space.·If·negative,·a·step·size | ||
| 196 | of·2/3·*·(·average·pixel·size·)·is·used.·(float;·default:·\-1.0).·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
| 197 | file·is·\fBuves_cal_wavecal.rebin.wavestep\fR·[default·=·\fI\-1.0\fR]. | ||
| 198 | .TP | ||
| 199 | \fB\-\-rebin.scale\fR·\fI<bool>\fR | ||
| 200 | Whether·or·not·to·multiply·by·the·factor·dx/dlambda·(pixels·per | ||
| 201 | wavelength)·during·the·rebinning.·This·option·is·disabled·as·default | ||
| 202 | in·concordance·with·the·method·used·in·the·MIDAS·pipeline.·This·option | ||
| 203 | should·be·set·to·true·to·convert·the·observed·flux·(in·pixel\-space)·to | ||
| 204 | a·flux·per·wavelength·(in·wavelength\-space).·(bool;·default:·False).·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
| 205 | file·is·\fBuves_cal_wavecal.rebin.scale\fR·[default·=·\fIFalse\fR]. | ||
| 206 | .TP | ||
| 194 | \fB\-\-extract.method\fR·\fI<str>\fR | 207 | \fB\-\-extract.method\fR·\fI<str>\fR |
| 195 | Extraction·method.·(2d/optimal·not·supported·by·uves_cal_wavecal, | 208 | Extraction·method.·(2d/optimal·not·supported·by·uves_cal_wavecal, |
| 196 | weighted·supported·only·by·uves_cal_wavecal,·2d·not·supported·by | 209 | weighted·supported·only·by·uves_cal_wavecal,·2d·not·supported·by |
| 197 | uves_cal_response)·(str;·default:·\'average\').·The·full·name·of·this·option·for·the·EsoRex·configuration | 210 | uves_cal_response)·(str;·default:·\'average\').·The·full·name·of·this·option·for·the·EsoRex·configuration |
| 198 | file·is·\fBuves_cal_wavecal.extract.method\fR·[default·=·\fIaverage\fR]. | 211 | file·is·\fBuves_cal_wavecal.extract.method\fR·[default·=·\fIaverage\fR]. |
| 199 | .TP | 212 | .TP |
| 200 | \fB\-\-extract.kappa\fR·\fI<float>\fR | 213 | \fB\-\-extract.kappa\fR·\fI<float>\fR |
| Offset 247, 27 lines modified | Offset 260, 14 lines modified | ||
| 247 | (optimal·extraction·only)·If·false·(fastest),·the·spectrum·is | 260 | (optimal·extraction·only)·If·false·(fastest),·the·spectrum·is |
| 248 | extracted·only·once.·If·true·(best),·the·spectrum·is·extracted·twice, | 261 | extracted·only·once.·If·true·(best),·the·spectrum·is·extracted·twice, |
| 249 | the·second·time·using·improved·variance·estimates·based·on·the·first | 262 | the·second·time·using·improved·variance·estimates·based·on·the·first |
| 250 | iteration.·Better·variance·estimates·slightly·improve·the·obtained | 263 | iteration.·Better·variance·estimates·slightly·improve·the·obtained |
| 251 | signal·to·noise·but·at·the·cost·of·increased·execution·time·(bool; | 264 | signal·to·noise·but·at·the·cost·of·increased·execution·time·(bool; |
| 252 | default:·True).·The·full·name·of·this·option·for·the·EsoRex·configuration | 265 | default:·True).·The·full·name·of·this·option·for·the·EsoRex·configuration |
| 253 | file·is·\fBuves_cal_wavecal.extract.best\fR·[default·=·\fITrue\fR]. | 266 | file·is·\fBuves_cal_wavecal.extract.best\fR·[default·=·\fITrue\fR]. |
| 254 | .TP | ||
| 255 | \fB\-\-rebin.wavestep\fR·\fI<float>\fR | ||
| 256 | The·bin·size·(in·w.l.u.)·in·wavelength·space.·If·negative,·a·step·size | ||
| 257 | of·2/3·*·(·average·pixel·size·)·is·used.·(float;·default:·\-1.0).·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
| 258 | file·is·\fBuves_cal_wavecal.rebin.wavestep\fR·[default·=·\fI\-1.0\fR]. | ||
| 259 | .TP | ||
| 260 | \fB\-\-rebin.scale\fR·\fI<bool>\fR | ||
| 261 | Whether·or·not·to·multiply·by·the·factor·dx/dlambda·(pixels·per | ||
| 262 | wavelength)·during·the·rebinning.·This·option·is·disabled·as·default | ||
| 263 | in·concordance·with·the·method·used·in·the·MIDAS·pipeline.·This·option | ||
| 264 | should·be·set·to·true·to·convert·the·observed·flux·(in·pixel\-space)·to | ||
| 265 | a·flux·per·wavelength·(in·wavelength\-space).·(bool;·default:·False).·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
| 266 | file·is·\fBuves_cal_wavecal.rebin.scale\fR·[default·=·\fIFalse\fR]. | ||
| 267 | .PP | 267 | .PP |
| 268 | Note·that·it·is·possible·to·create·a·configuration·file·containing·these | 268 | Note·that·it·is·possible·to·create·a·configuration·file·containing·these |
| 269 | options,·along·with·suitable·default·values.·Please·refer·to·the·details | 269 | options,·along·with·suitable·default·values.·Please·refer·to·the·details |
| 270 | provided·by·the·'esorex·\-\-help'·command. | 270 | provided·by·the·'esorex·\-\-help'·command. |
| 271 | .SH·SEE·ALSO | 271 | .SH·SEE·ALSO |
| Offset 62, 154 lines modified | Offset 62, 173 lines modified | ||
| 62 | file·is·\fBuves.plotter\fR·[default·=·\fIno\fR]. | 62 | file·is·\fBuves.plotter\fR·[default·=·\fIno\fR]. |
| 63 | .TP | 63 | .TP |
| 64 | \fB\-\-process_chip\fR·\fI<str>\fR | 64 | \fB\-\-process_chip\fR·\fI<str>\fR |
| 65 | For·RED·arm·data·process·the·redl,·redu,·or·both·chip(s)·(str; | 65 | For·RED·arm·data·process·the·redl,·redu,·or·both·chip(s)·(str; |
| 66 | default:·\'both\').·The·full·name·of·this·option·for·the·EsoRex·configuration | 66 | default:·\'both\').·The·full·name·of·this·option·for·the·EsoRex·configuration |
| 67 | file·is·\fBuves.process_chip\fR·[default·=·\fIboth\fR]. | 67 | file·is·\fBuves.process_chip\fR·[default·=·\fIboth\fR]. |
| 68 | .TP | 68 | .TP |
| 69 | \fB\-\-uves_cal_wavecal.nwindows\fR·\fI<int>\fR | ||
| 70 | Number·of·extraction·windows·per·trace.·The·windows·will·be·aligned | ||
| 71 | (i.e.·no·overlap·and·no·spacing·between·adjacent·windows).·Unless·an | ||
| 72 | offset·is·specified,·the·middle·window(s)·is·centered·on·the·trace | ||
| 69 | \fB\-\-uves_cal_mflat.norm_method\fR·\fI<str>\fR | ||
| 70 | Method·used·to·build·master·frame··(str;·default:·\'explevel\').·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
| 71 | file·is·\fBuves_obs_redchain.uves_cal_mflat.norm_method\fR·[default·=·\fIexplevel\fR]. | ||
| 72 | .TP | ||
| 73 | \fB\-\-uves_cal_mflat.backsub.mmethod\fR·\fI<str>\fR | ||
| 74 | Background·measuring·method.·If·equal·to·\'median\'·the·background·is | ||
| 75 | sampled·using·the·median·of·a·subwindow.·If·\'minimum\',·the·subwindow | ||
| 76 | minimum·value·is·used.·If·\'no\',·no·background·subtraction·is·done. | ||
| 77 | (str;·default:·\'median\').·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
| 78 | file·is·\fBuves_obs_redchain.uves_cal_mflat.backsub.mmethod\fR·[default·=·\fImedian\fR]. | ||
| 79 | .TP | ||
| 80 | \fB\-\-uves_cal_mflat.backsub.npoints\fR·\fI<int>\fR | ||
| 81 | This·is·the·number·of·columns·in·interorder·space·used·to·sample·the | ||
| 82 | background.·(int;·default:·82).·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
| 83 | file·is·\fBuves_obs_redchain.uves_cal_mflat.backsub.npoints\fR·[default·=·\fI82\fR]. | ||
| 84 | .TP | ||
| 85 | \fB\-\-uves_cal_mflat.backsub.radiusy\fR·\fI<int>\fR | ||
| 86 | The·height·(in·pixels)·of·the·background·sampling·window·is·(2*radiusy | ||
| 87 | +·1).·This·parameter·is·not·corrected·for·binning.·(int;·default:·2).·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
| 88 | file·is·\fBuves_obs_redchain.uves_cal_mflat.backsub.radiusy\fR·[default·=·\fI2\fR]. | ||
| 89 | .TP | ||
| 90 | \fB\-\-uves_cal_mflat.backsub.sdegree\fR·\fI<int>\fR | ||
| 91 | Degree·of·interpolating·splines.·Currently·only·degree·=·1·is | ||
| 92 | 73 | (int;·default:·3).·The·full·name·of·this·option·for·the·EsoRex·configuration | |
| 93 | file·is·\fBuves_obs_redchain.uves_cal_ | 74 | file·is·\fBuves_obs_redchain.uves_cal_wavecal.nwindows\fR·[default·=·\fI3\fR]. |
| 94 | .TP | 75 | .TP |
| 95 | \fB\-\-uves_cal_mflat.backsub.smoothx\fR·\fI<float>\fR | ||
| 96 | If·spline·interpolation·is·used·to·measure·the·background,·the | ||
| 97 | x\-radius·of·the·post\-smoothing·window·is·(smoothx·*·image_width). | ||
| 98 | Here,·\'image_width\'·is·the·image·width·after·binning.·If·negative,·the | ||
| 99 | default·values·are·used:·(25.0/4096)·for·blue·flat\-field·frames, | ||
| 100 | (50.0/4096)·for·red·flat\-field·frames,·(300.0/4096)·for·blue·science | ||
| 101 | 76 | \fB\-\-uves_cal_wavecal.length\fR·\fI<float>\fR | |
| 77 | Length·(in·pixels)·of·each·extraction·window.·This·parameter·is·also | ||
| 78 | equal·to·the·seperation·of·adjacent·window·centers,·causing·the | ||
| 79 | extraction·windows·to·always·be·aligned.·The·parameter·is | ||
| 80 | automatically·adjusted·according·to·the·binning·of·the·input·raw | ||
| 81 | frame.·If·negative,·the·extraction·window·length·is·determined | ||
| 82 | automatically·to·cover·the·full·slit·(float;·default:·\-1.0).·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
| 102 | file·is·\fBuves_obs_redchain.uves_cal_ | 83 | file·is·\fBuves_obs_redchain.uves_cal_wavecal.length\fR·[default·=·\fI\-1.0\fR]. |
| 103 | .TP | 84 | .TP |
| 85 | \fB\-\-uves_cal_wavecal.offset\fR·\fI<float>\fR | ||
| 86 | A·global·offset·(in·pixels)·of·all·extraction·windows·(float;·default: | ||
| 87 | 0.0).·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
| 104 | \fB\-\-uves_cal_mflat.backsub.smoothy\fR·\fI<float>\fR | ||
| 105 | If·spline·interpolation·is·used·to·measure·the·background,·the | ||
| 106 | y\-radius·of·the·post\-smoothing·window·is·(smoothy·*·image_height). | ||
| 107 | Here,·\'image_height\'·is·the·image·height·after·binning.·If·negative, | ||
| 108 | the·default·values·are·used:·(100.0/2048)·for·blue·flat\-field·frames, | ||
| 109 | (300.0/2048)·for·red·flat\-field·frames,·(200.0/2048)·for·blue·science | ||
| 110 | frames·and·(500.0/2048)·for·red·science·frames.·(float;·default:·\-1.0).·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
| 111 | file·is·\fBuves_obs_redchain.uves_cal_ | 88 | file·is·\fBuves_obs_redchain.uves_cal_wavecal.offset\fR·[default·=·\fI0.0\fR]. |
| 112 | .TP | 89 | .TP |
| 113 | \fB\-\-uves_cal_mdark.stack_method\fR·\fI<str>\fR | ||
| 114 | 90 | \fB\-\-uves_cal_wavecal.range\fR·\fI<int>\fR | |
| 91 | Width·(pix)·of·search·window·is·2*range·+·1.·This·parameter·is | ||
| 92 | automatically·adjusted·according·to·binning.·(int;·default:·8).·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
| 115 | file·is·\fBuves_obs_redchain.uves_cal_ | 93 | file·is·\fBuves_obs_redchain.uves_cal_wavecal.search.range\fR·[default·=·\fI8\fR]. |
| 116 | .TP | 94 | .TP |
| 117 | \fB\-\-uves_cal_mdark.klow\fR·\fI<float>\fR | ||
| 118 | Kappa·used·to·clip·low·level·values,·when·method·is·set·to·\'mean\' | ||
| 119 | 95 | \fB\-\-uves_cal_wavecal.minlines\fR·\fI<int>\fR | |
| 96 | Minimum·number·of·lines·to·detect.·If·zero,·the·default·value·(1100 | ||
| 97 | for·BLUE/REDL·chips;·1000·for·REDU·chip)·is·used.·(int;·default:·0).·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
| 120 | file·is·\fBuves_obs_redchain.uves_cal_ | 98 | file·is·\fBuves_obs_redchain.uves_cal_wavecal.search.minlines\fR·[default·=·\fI0\fR]. |
| 121 | .TP | 99 | .TP |
| 122 | \fB\-\-uves_cal_mdark.khigh\fR·\fI<float>\fR | ||
| 123 | Kappa·used·to·clip·high·level·values,·when·method·is·set·to·\'mean\' | ||
| 124 | 100 | \fB\-\-uves_cal_wavecal.maxlines\fR·\fI<int>\fR | |
| 101 | Maximum·number·of·lines·to·detect.·If·zero,·the·default·value·(1600 | ||
| 102 | for·BLUE/REDL·chip;·1400·for·REDU·chip)·is·used.·(int;·default:·0).·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
| 125 | file·is·\fBuves_obs_redchain.uves_cal_ | 103 | file·is·\fBuves_obs_redchain.uves_cal_wavecal.search.maxlines\fR·[default·=·\fI0\fR]. |
| 126 | .TP | 104 | .TP |
| 127 | \fB\-\-uves_cal_mdark.niter\fR·\fI<int>\fR | ||
| 128 | 105 | \fB\-\-uves_cal_wavecal.shiftmax\fR·\fI<float>\fR | |
| 106 | The·maximum·shift·(pix)·in·either·direction·compared·to·guess | ||
| 107 | solution.·This·parameter·is·automatically·corrected·for·binning | ||
| 129 | default:· | 108 | (float;·default:·10.0).·The·full·name·of·this·option·for·the·EsoRex·configuration |
| 130 | file·is·\fBuves_obs_redchain.uves_cal_ | 109 | file·is·\fBuves_obs_redchain.uves_cal_wavecal.first.shiftmax\fR·[default·=·\fI10.0\fR]. |
| 131 | .TP | 110 | .TP |
| 132 | \fB\-\-uves_cal_mdark.stack_method\fR·\fI<str>\fR | ||
| 133 | 111 | \fB\-\-uves_cal_wavecal.shiftstep\fR·\fI<float>\fR | |
| 112 | The·step·size·(pix)·used·when·searching·for·the·optimum·shift.·This | ||
| 113 | parameter·is·automatically·corrected·for·binning·(float;·default:·0.1).·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
| 134 | file·is·\fBuves_obs_redchain.uves_cal_ | 114 | file·is·\fBuves_obs_redchain.uves_cal_wavecal.first.shiftstep\fR·[default·=·\fI0.1\fR]. |
| 135 | .TP | 115 | .TP |
| 136 | \fB\-\-uves_cal_mdark.klow\fR·\fI<float>\fR | ||
| 137 | 116 | \fB\-\-uves_cal_wavecal.shifttoler\fR·\fI<float>\fR | |
| 117 | Tolerance·(pix)·when·matching·shifted·lines.·This·parameter·is·not | ||
| 138 | (float;·default:· | 118 | adjusted·according·to·binning·(float;·default:·0.05).·The·full·name·of·this·option·for·the·EsoRex·configuration |
| 139 | file·is·\fBuves_obs_redchain.uves_cal_ | 119 | file·is·\fBuves_obs_redchain.uves_cal_wavecal.first.shifttoler\fR·[default·=·\fI0.05\fR]. |
| 140 | .TP | 120 | .TP |
| 141 | \fB\-\-uves_cal_ | 121 | \fB\-\-uves_cal_wavecal.alpha\fR·\fI<float>\fR |
| 142 | 122 | The·parameter·that·controls·the·distance·to·the·nearest·neighbours | |
| 143 | (float;·default:· | 123 | (float;·default:·0.1).·The·full·name·of·this·option·for·the·EsoRex·configuration |
| 144 | file·is·\fBuves_obs_redchain.uves_cal_ | 124 | file·is·\fBuves_obs_redchain.uves_cal_wavecal.identify.alpha\fR·[default·=·\fI0.1\fR]. |
| 145 | .TP | 125 | .TP |
| 146 | \fB\-\-uves_cal_mdark.niter\fR·\fI<int>\fR | ||
| 147 | 126 | \fB\-\-uves_cal_wavecal.maxerror\fR·\fI<float>\fR | |
| 127 | This·parameter·controls·the·graceful·exit·of·the·identification·loop. | ||
| 128 | If·the·RMS·of·the·global·fit·exceeds·this·value·(pix)·the·iteration | ||
| 148 | default:· | 129 | stops·(float;·default:·20.0).·The·full·name·of·this·option·for·the·EsoRex·configuration |
| 149 | file·is·\fBuves_obs_redchain.uves_cal_ | 130 | file·is·\fBuves_obs_redchain.uves_cal_wavecal.identify.maxerror\fR·[default·=·\fI20.0\fR]. |
| 150 | .TP | 131 | .TP |
| 151 | \fB\-\-uves_cal_mdark.qc_dark.reg.num_x\fR·\fI<int>\fR | ||
| 152 | 132 | \fB\-\-uves_cal_wavecal.degree\fR·\fI<int>\fR | |
| 133 | Degrees·of·the·global·2d·dispersion·polynomial.·If·a·negative·number | ||
| 134 | is·specified,·the·polynomial·degrees·are·automatically·selected·by | ||
| 135 | starting·from·(1,·1)·and·inreasing·the·degrees·as·long·as·the·RMS | ||
| 153 | (int;·default:·4).·The·full·name·of·this·option·for·the·EsoRex·configuration | 136 | residual·decreases·significantly·(int;·default:·4).·The·full·name·of·this·option·for·the·EsoRex·configuration |
| 154 | file·is·\fBuves_obs_redchain.uves_cal_ | 137 | file·is·\fBuves_obs_redchain.uves_cal_wavecal.identify.degree\fR·[default·=·\fI4\fR]. |
| 155 | .TP | 138 | .TP |
| 156 | \fB\-\-uves_cal_mdark.qc_dark.reg.num_y\fR·\fI<int>\fR | ||
| 157 | 139 | \fB\-\-uves_cal_wavecal.tolerance\fR·\fI<float>\fR | |
| 140 | Tolerance·of·fit.·If·positive,·the·tolerance·is·in·pixel·units.·If | ||
| 141 | negative,·abs(tolerance)·is·in·wavelength·units.·Lines·with·residuals | ||
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| Offset 154, 27 lines modified | Offset 154, 14 lines modified | ||
| 154 | \fB\-\-reduce.merge_delt2\fR·\fI<float>\fR | 154 | \fB\-\-reduce.merge_delt2\fR·\fI<float>\fR |
| 155 | Order·merging·right·hand·(long·wavelength)·cut.·To·reduce·the·amount | 155 | Order·merging·right·hand·(long·wavelength)·cut.·To·reduce·the·amount |
| 156 | of·order·overlapping·regions·we·allow·to·cut·short·and·long·wavelength | 156 | of·order·overlapping·regions·we·allow·to·cut·short·and·long·wavelength |
| 157 | ranges.·This·may·reduce·the·ripple·possibly·introduced·by·the·order | 157 | ranges.·This·may·reduce·the·ripple·possibly·introduced·by·the·order |
| 158 | merging.·Suggested·values·is·4·(float;·default:·0.0).·The·full·name·of·this·option·for·the·EsoRex·configuration | 158 | merging.·Suggested·values·is·4·(float;·default:·0.0).·The·full·name·of·this·option·for·the·EsoRex·configuration |
| 159 | file·is·\fBuves_obs_scired.reduce.merge_delt2\fR·[default·=·\fI0.0\fR]. | 159 | file·is·\fBuves_obs_scired.reduce.merge_delt2\fR·[default·=·\fI0.0\fR]. |
| 160 | .TP | 160 | .TP |
| 161 | \fB\-\-reduce.rebin.wavestep\fR·\fI<float>\fR | ||
| 162 | The·bin·size·(in·w.l.u.)·in·wavelength·space.·If·negative,·a·step·size | ||
| 163 | of·2/3·*·(·average·pixel·size·)·is·used.·(float;·default:·\-1.0).·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
| 164 | file·is·\fBuves_obs_scired.reduce.rebin.wavestep\fR·[default·=·\fI\-1.0\fR]. | ||
| 165 | .TP | ||
| 166 | \fB\-\-reduce.rebin.scale\fR·\fI<bool>\fR | ||
| 167 | Whether·or·not·to·multiply·by·the·factor·dx/dlambda·(pixels·per | ||
| 168 | wavelength)·during·the·rebinning.·This·option·is·disabled·as·default | ||
| 169 | in·concordance·with·the·method·used·in·the·MIDAS·pipeline.·This·option | ||
| 170 | should·be·set·to·true·to·convert·the·observed·flux·(in·pixel\-space)·to | ||
| 171 | a·flux·per·wavelength·(in·wavelength\-space).·(bool;·default:·False).·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
| 172 | file·is·\fBuves_obs_scired.reduce.rebin.scale\fR·[default·=·\fIFalse\fR]. | ||
| 173 | .TP | ||
| 174 | \fB\-\-reduce.extract.method\fR·\fI<str>\fR | 161 | \fB\-\-reduce.extract.method\fR·\fI<str>\fR |
| 175 | Extraction·method.·(2d/optimal·not·supported·by·uves_cal_wavecal, | 162 | Extraction·method.·(2d/optimal·not·supported·by·uves_cal_wavecal, |
| 176 | weighted·supported·only·by·uves_cal_wavecal,·2d·not·supported·by | 163 | weighted·supported·only·by·uves_cal_wavecal,·2d·not·supported·by |
| 177 | uves_cal_response)·(str;·default:·\'optimal\').·The·full·name·of·this·option·for·the·EsoRex·configuration | 164 | uves_cal_response)·(str;·default:·\'optimal\').·The·full·name·of·this·option·for·the·EsoRex·configuration |
| 178 | file·is·\fBuves_obs_scired.reduce.extract.method\fR·[default·=·\fIoptimal\fR]. | 165 | file·is·\fBuves_obs_scired.reduce.extract.method\fR·[default·=·\fIoptimal\fR]. |
| 179 | .TP | 166 | .TP |
| 180 | \fB\-\-reduce.extract.kappa\fR·\fI<float>\fR | 167 | \fB\-\-reduce.extract.kappa\fR·\fI<float>\fR |
| Offset 267, 14 lines modified | Offset 254, 27 lines modified | ||
| 267 | If·spline·interpolation·is·used·to·measure·the·background,·the | 254 | If·spline·interpolation·is·used·to·measure·the·background,·the |
| 268 | y\-radius·of·the·post\-smoothing·window·is·(smoothy·*·image_height). | 255 | y\-radius·of·the·post\-smoothing·window·is·(smoothy·*·image_height). |
| 269 | Here,·\'image_height\'·is·the·image·height·after·binning.·If·negative, | 256 | Here,·\'image_height\'·is·the·image·height·after·binning.·If·negative, |
| 270 | the·default·values·are·used:·(100.0/2048)·for·blue·flat\-field·frames, | 257 | the·default·values·are·used:·(100.0/2048)·for·blue·flat\-field·frames, |
| 271 | (300.0/2048)·for·red·flat\-field·frames,·(200.0/2048)·for·blue·science | 258 | (300.0/2048)·for·red·flat\-field·frames,·(200.0/2048)·for·blue·science |
| 272 | frames·and·(500.0/2048)·for·red·science·frames.·(float;·default:·\-1.0).·The·full·name·of·this·option·for·the·EsoRex·configuration | 259 | frames·and·(500.0/2048)·for·red·science·frames.·(float;·default:·\-1.0).·The·full·name·of·this·option·for·the·EsoRex·configuration |
| 273 | file·is·\fBuves_obs_scired.reduce.backsub.smoothy\fR·[default·=·\fI\-1.0\fR]. | 260 | file·is·\fBuves_obs_scired.reduce.backsub.smoothy\fR·[default·=·\fI\-1.0\fR]. |
| 261 | .TP | ||
| 262 | \fB\-\-reduce.rebin.wavestep\fR·\fI<float>\fR | ||
| 263 | The·bin·size·(in·w.l.u.)·in·wavelength·space.·If·negative,·a·step·size | ||
| 264 | of·2/3·*·(·average·pixel·size·)·is·used.·(float;·default:·\-1.0).·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
| 265 | file·is·\fBuves_obs_scired.reduce.rebin.wavestep\fR·[default·=·\fI\-1.0\fR]. | ||
| 266 | .TP | ||
| 267 | \fB\-\-reduce.rebin.scale\fR·\fI<bool>\fR | ||
| 268 | Whether·or·not·to·multiply·by·the·factor·dx/dlambda·(pixels·per | ||
| 269 | wavelength)·during·the·rebinning.·This·option·is·disabled·as·default | ||
| 270 | in·concordance·with·the·method·used·in·the·MIDAS·pipeline.·This·option | ||
| 271 | should·be·set·to·true·to·convert·the·observed·flux·(in·pixel\-space)·to | ||
| 272 | a·flux·per·wavelength·(in·wavelength\-space).·(bool;·default:·False).·The·full·name·of·this·option·for·the·EsoRex·configuration | ||
| 273 | file·is·\fBuves_obs_scired.reduce.rebin.scale\fR·[default·=·\fIFalse\fR]. | ||
| 274 | .PP | 274 | .PP |
| 275 | Note·that·it·is·possible·to·create·a·configuration·file·containing·these | 275 | Note·that·it·is·possible·to·create·a·configuration·file·containing·these |
| 276 | options,·along·with·suitable·default·values.·Please·refer·to·the·details | 276 | options,·along·with·suitable·default·values.·Please·refer·to·the·details |
| 277 | provided·by·the·'esorex·\-\-help'·command. | 277 | provided·by·the·'esorex·\-\-help'·command. |
| 278 | .SH·SEE·ALSO | 278 | .SH·SEE·ALSO |