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| 32 | -rw-r--r--···0·root·········(0)·root·········(0)·····1316·2021-02-02·09:27:14.000000·./usr/share/man/man1/diff_map.1.gz | 32 | -rw-r--r--···0·root·········(0)·root·········(0)·····1316·2021-02-02·09:27:14.000000·./usr/share/man/man1/diff_map.1.gz |
| 33 | -rw-r--r--···0·root·········(0)·root·········(0)·····1209·2021-02-02·09:27:14.000000·./usr/share/man/man1/diff_tomo.1.gz | 33 | -rw-r--r--···0·root·········(0)·root·········(0)·····1209·2021-02-02·09:27:14.000000·./usr/share/man/man1/diff_tomo.1.gz |
| 34 | -rw-r--r--···0·root·········(0)·root·········(0)······406·2021-02-02·09:27:14.000000·./usr/share/man/man1/eiger-mask.1.gz | 34 | -rw-r--r--···0·root·········(0)·root·········(0)······406·2021-02-02·09:27:14.000000·./usr/share/man/man1/eiger-mask.1.gz |
| 35 | -rw-r--r--···0·root·········(0)·root·········(0)·····1145·2021-02-02·09:27:14.000000·./usr/share/man/man1/pyFAI-average.1.gz | 35 | -rw-r--r--···0·root·········(0)·root·········(0)·····1145·2021-02-02·09:27:14.000000·./usr/share/man/man1/pyFAI-average.1.gz |
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| 38 | -rw-r--r--···0·root·········(0)·root·········(0)·····2445·2021-02-02·09:27:14.000000·./usr/share/man/man1/pyFAI-calib2.1.gz | 38 | -rw-r--r--···0·root·········(0)·root·········(0)·····2445·2021-02-02·09:27:14.000000·./usr/share/man/man1/pyFAI-calib2.1.gz |
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| 41 | -rw-r--r--···0·root·········(0)·root·········(0)·····1229·2021-02-02·09:27:14.000000·./usr/share/man/man1/pyFAI-integrate.1.gz | 41 | -rw-r--r--···0·root·········(0)·root·········(0)·····1229·2021-02-02·09:27:14.000000·./usr/share/man/man1/pyFAI-integrate.1.gz |
| 42 | -rw-r--r--···0·root·········(0)·root·········(0)·····257 | 42 | -rw-r--r--···0·root·········(0)·root·········(0)·····2579·2021-02-02·09:27:14.000000·./usr/share/man/man1/pyFAI-recalib.1.gz |
| 43 | -rw-r--r--···0·root·········(0)·root·········(0)·····1042·2021-02-02·09:27:14.000000·./usr/share/man/man1/pyFAI-saxs.1.gz | 43 | -rw-r--r--···0·root·········(0)·root·········(0)·····1042·2021-02-02·09:27:14.000000·./usr/share/man/man1/pyFAI-saxs.1.gz |
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| 45 | -rw-r--r--···0·root·········(0)·root·········(0)·····1462·2021-02-02·09:27:14.000000·./usr/share/man/man1/sparsify-Bragg.1.gz | 45 | -rw-r--r--···0·root·········(0)·root·········(0)·····1462·2021-02-02·09:27:14.000000·./usr/share/man/man1/sparsify-Bragg.1.gz |
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| 1 | .\"·DO·NOT·MODIFY·THIS·FILE!··It·was·generated·by·help2man·1.48.1. | 1 | .\"·DO·NOT·MODIFY·THIS·FILE!··It·was·generated·by·help2man·1.48.1. |
| 2 | .TH·DETECTOR2NEXUS',·"1"·"February·2021"·"detector2nexus',·'--version']"·"User·Commands" | 2 | .TH·DETECTOR2NEXUS',·"1"·"February·2021"·"detector2nexus',·'--version']"·"User·Commands" |
| 3 | .SH·NAME | 3 | .SH·NAME |
| 4 | detector2nexus',·\-·Converts·a·detector·description·into·a·NeXus·detector·usable·by·other·pyFAI·utilities | 4 | detector2nexus',·\-·Converts·a·detector·description·into·a·NeXus·detector·usable·by·other·pyFAI·utilities |
| 5 | .SH·DESCRIPTION | 5 | .SH·DESCRIPTION |
| 6 | ['/tmp/tmp | 6 | ['/tmp/tmp8n7123dk/detector2nexus',·'\-\-help'] |
| 7 | usage:·detector2nexus·[options]·[options]·\fB\-o\fR·nxs.h5 | 7 | usage:·detector2nexus·[options]·[options]·\fB\-o\fR·nxs.h5 |
| 8 | .PP | 8 | .PP |
| 9 | Convert·a·complex·detector·definition·(multiple·modules,·possibly·in·3D)·into | 9 | Convert·a·complex·detector·definition·(multiple·modules,·possibly·in·3D)·into |
| 10 | a·single·NeXus·detector·definition·together·with·the·mask·(and·much·more·in | 10 | a·single·NeXus·detector·definition·together·with·the·mask·(and·much·more·in |
| 11 | the·future) | 11 | the·future) |
| 12 | .SS·"optional·arguments:" | 12 | .SS·"optional·arguments:" |
| 13 | .TP | 13 | .TP |
| Offset 4, 20 lines modified | Offset 4, 21 lines modified | ||
| 4 | calibration·\-·CLI·tool·for·determining·the·geometry·of·a·detector·using·a·reference·sample. | 4 | calibration·\-·CLI·tool·for·determining·the·geometry·of·a·detector·using·a·reference·sample. |
| 5 | .SH·DESCRIPTION | 5 | .SH·DESCRIPTION |
| 6 | usage:·pyFAI\-calib·[options]·\fB\-w\fR·1·\fB\-D\fR·detector·\fB\-c\fR·calibrant.D·imagefile.edf | 6 | usage:·pyFAI\-calib·[options]·\fB\-w\fR·1·\fB\-D\fR·detector·\fB\-c\fR·calibrant.D·imagefile.edf |
| 7 | .PP | 7 | .PP |
| 8 | Calibrate·the·diffraction·setup·geometry·based·on·Debye\-Sherrer·rings·images | 8 | Calibrate·the·diffraction·setup·geometry·based·on·Debye\-Sherrer·rings·images |
| 9 | without·a·priori·knowledge·of·your·setup.·You·will·need·to·provide·a·calibrant | 9 | without·a·priori·knowledge·of·your·setup.·You·will·need·to·provide·a·calibrant |
| 10 | or·a·"d\-spacing"·file·containing·the·spacing·of·Miller·plans·in·Angstrom·(in | 10 | or·a·"d\-spacing"·file·containing·the·spacing·of·Miller·plans·in·Angstrom·(in |
| 11 | decreasing·order).·Calibrants·available:· | 11 | decreasing·order).·Calibrants·available:·alpha_Al2O3,·Si_SRM640e, |
| 12 | PBBA,·Si_SRM640b,·Si_SRM640c,·Si_SRM640a,·quartz,·C14H30O,·ZnO,·Au,·AgBh,·Pt, | ||
| 13 | Si,·mock,·CrOx,·LaB6_SRM660a,·Cr2O3,·Si_SRM640d,·LaB6,·CeO2,·LaB6_SRM660b, | ||
| 14 | CuO,·NaCl,·Ni,·Si_SRM640,·Al,·LaB6_SRM660c,·alpha_Al2O3·or·search·in·the | ||
| 15 | American·Mineralogist·database:·http://rruff.geo.arizona.edu/AMS/amcsd.php·The | ||
| 16 | 12 | cristobaltite,·Si_SRM640b,·CrOx,·mock,·TiO2,·NaCl,·Si_SRM640a,·quartz,·Si,·Ni, | |
| 13 | Al,·C14H30O,·CuO,·LaB6,·Si_SRM640,·ZnO,·Au,·AgBh,·LaB6_SRM660a,·Pt, | ||
| 14 | Si_SRM640c,·PBBA,·LaB6_SRM660c,·Si_SRM640d,·CeO2,·LaB6_SRM660b,·Cr2O3·or | ||
| 15 | search·in·the·American·Mineralogist·database: | ||
| 16 | http://rruff.geo.arizona.edu/AMS/amcsd.php·The·\fB\-\-calibrant\fR·option·is·mandatory | ||
| 17 | ! | ||
| 17 | .SS·"positional·arguments:" | 18 | .SS·"positional·arguments:" |
| 18 | .TP | 19 | .TP |
| 19 | FILE | 20 | FILE |
| 20 | List·of·files·to·calibrate | 21 | List·of·files·to·calibrate |
| 21 | .SS·"optional·arguments:" | 22 | .SS·"optional·arguments:" |
| 22 | .TP | 23 | .TP |
| 23 | \fB\-h\fR,·\fB\-\-help\fR | 24 | \fB\-h\fR,·\fB\-\-help\fR |
| Offset 4, 19 lines modified | Offset 4, 20 lines modified | ||
| 4 | calibration·\-·GUI·tool·for·determining·the·geometry·of·a·detector·using·a·reference·sample. | 4 | calibration·\-·GUI·tool·for·determining·the·geometry·of·a·detector·using·a·reference·sample. |
| 5 | .SH·DESCRIPTION | 5 | .SH·DESCRIPTION |
| 6 | usage:·pyFAI\-calib2·[options]·input_image.edf | 6 | usage:·pyFAI\-calib2·[options]·input_image.edf |
| 7 | .PP | 7 | .PP |
| 8 | Calibrate·the·diffraction·setup·geometry·based·on·Debye\-Sherrer·rings·images | 8 | Calibrate·the·diffraction·setup·geometry·based·on·Debye\-Sherrer·rings·images |
| 9 | without·a·priori·knowledge·of·your·setup.·You·will·need·to·provide·a·calibrant | 9 | without·a·priori·knowledge·of·your·setup.·You·will·need·to·provide·a·calibrant |
| 10 | or·a·"d\-spacing"·file·containing·the·spacing·of·Miller·plans·in·Angstrom·(in | 10 | or·a·"d\-spacing"·file·containing·the·spacing·of·Miller·plans·in·Angstrom·(in |
| 11 | decreasing·order).·Calibrants·available:· | 11 | decreasing·order).·Calibrants·available:·alpha_Al2O3,·Si_SRM640e, |
| 12 | PBBA,·Si_SRM640b,·Si_SRM640c,·Si_SRM640a,·quartz,·C14H30O,·ZnO,·Au,·AgBh,·Pt, | ||
| 13 | Si,·mock,·CrOx,·LaB6_SRM660a,·Cr2O3,·Si_SRM640d,·LaB6,·CeO2,·LaB6_SRM660b, | ||
| 14 | CuO,·NaCl,·Ni,·Si_SRM640,·Al,·LaB6_SRM660c,·alpha_Al2O3·or·search·in·the | ||
| 15 | 12 | cristobaltite,·Si_SRM640b,·CrOx,·mock,·TiO2,·NaCl,·Si_SRM640a,·quartz,·Si,·Ni, | |
| 13 | Al,·C14H30O,·CuO,·LaB6,·Si_SRM640,·ZnO,·Au,·AgBh,·LaB6_SRM660a,·Pt, | ||
| 14 | Si_SRM640c,·PBBA,·LaB6_SRM660c,·Si_SRM640d,·CeO2,·LaB6_SRM660b,·Cr2O3·or | ||
| 15 | search·in·the·American·Mineralogist·database: | ||
| 16 | http://rruff.geo.arizona.edu/AMS/amcsd.php | ||
| 16 | .SS·"positional·arguments:" | 17 | .SS·"positional·arguments:" |
| 17 | .TP | 18 | .TP |
| 18 | FILE | 19 | FILE |
| 19 | List·of·files·to·calibrate | 20 | List·of·files·to·calibrate |
| 20 | .SS·"optional·arguments:" | 21 | .SS·"optional·arguments:" |
| 21 | .TP | 22 | .TP |
| 22 | \fB\-h\fR,·\fB\-\-help\fR | 23 | \fB\-h\fR,·\fB\-\-help\fR |
| Offset 4, 19 lines modified | Offset 4, 19 lines modified | ||
| 4 | calibration·\-·DEPRECATED·tool·for·refining·the·geometry·of·a·detector·using·a·reference·sample·and·a·previously·known·calibration·file. | 4 | calibration·\-·DEPRECATED·tool·for·refining·the·geometry·of·a·detector·using·a·reference·sample·and·a·previously·known·calibration·file. |
| 5 | .SH·DESCRIPTION | 5 | .SH·DESCRIPTION |
| 6 | usage:·pyFAI\-recalib·[options]·\fB\-i\fR·ponifile·\fB\-w\fR·1·\fB\-c\fR·calibrant.D·imagefile.edf | 6 | usage:·pyFAI\-recalib·[options]·\fB\-i\fR·ponifile·\fB\-w\fR·1·\fB\-c\fR·calibrant.D·imagefile.edf |
| 7 | .PP | 7 | .PP |
| 8 | Calibrate·the·diffraction·setup·geometry·based·on·Debye\-Sherrer·rings·images | 8 | Calibrate·the·diffraction·setup·geometry·based·on·Debye\-Sherrer·rings·images |
| 9 | with·a·priori·knowledge·of·your·setup·(an·input·PONI\-file).·You·will·need·to | 9 | with·a·priori·knowledge·of·your·setup·(an·input·PONI\-file).·You·will·need·to |
| 10 | provide·a·calibrant·or·a·"d\-spacing"·file·containing·the·spacing·of·Miller | 10 | provide·a·calibrant·or·a·"d\-spacing"·file·containing·the·spacing·of·Miller |
| 11 | plans·in·Angstrom·(in·decreasing·order).·Calibrants·available:· | 11 | plans·in·Angstrom·(in·decreasing·order).·Calibrants·available:·alpha_Al2O3, |
| 12 | cristobaltite,·Si_SRM640e,·PBBA,·Si_SRM640b,·Si_SRM640c,·Si_SRM640a,·quartz, | ||
| 13 | C14H30O,·ZnO,·Au,·AgBh,·Pt,·Si,·mock,·CrOx,·LaB6_SRM660a,·Cr2O3,·Si_SRM640d, | ||
| 14 | 12 | Si_SRM640e,·cristobaltite,·Si_SRM640b,·CrOx,·mock,·TiO2,·NaCl,·Si_SRM640a, | |
| 13 | quartz,·Si,·Ni,·Al,·C14H30O,·CuO,·LaB6,·Si_SRM640,·ZnO,·Au,·AgBh, | ||
| 14 | LaB6_SRM660a,·Pt,·Si_SRM640c,·PBBA,·LaB6_SRM660c,·Si_SRM640d,·CeO2, | ||
| 15 | a | 15 | LaB6_SRM660b,·Cr2O3·or·search·in·the·American·Mineralogist·database: |
| 16 | http://rruff.geo.arizona.edu/AMS/amcsd.php·The·\fB\-\-calibrant\fR·option·is·mandatory | 16 | http://rruff.geo.arizona.edu/AMS/amcsd.php·The·\fB\-\-calibrant\fR·option·is·mandatory |
| 17 | ! | 17 | ! |
| 18 | .SS·"positional·arguments:" | 18 | .SS·"positional·arguments:" |
| 19 | .TP | 19 | .TP |
| 20 | FILE | 20 | FILE |
| 21 | List·of·files·to·calibrate | 21 | List·of·files·to·calibrate |
| 22 | .SS·"optional·arguments:" | 22 | .SS·"optional·arguments:" |
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| 1 | -rw-r--r--···0········0········0········4·2021-02-02·09:27:14.000000·debian-binary | 1 | -rw-r--r--···0········0········0········4·2021-02-02·09:27:14.000000·debian-binary |
| 2 | -rw-r--r--···0········0········0····1044 | 2 | -rw-r--r--···0········0········0····10444·2021-02-02·09:27:14.000000·control.tar.xz |
| 3 | -rw-r--r--···0········0········0·573898 | 3 | -rw-r--r--···0········0········0·57389812·2021-02-02·09:27:14.000000·data.tar.xz |
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| 5448 | <span·id="calibrant-module"></span><h2><code·class="xref·py·py-mod·docutils·literal·notranslate"><span·class="pre">calibrant</span></code>·Module<a·class="headerlink"·href="#module-pyFAI.calibrant"·title="Permalink·to·this·headline">¶</a></h2> | 5448 | <span·id="calibrant-module"></span><h2><code·class="xref·py·py-mod·docutils·literal·notranslate"><span·class="pre">calibrant</span></code>·Module<a·class="headerlink"·href="#module-pyFAI.calibrant"·title="Permalink·to·this·headline">¶</a></h2> |
| 5449 | <p>Calibrant</p> | 5449 | <p>Calibrant</p> |
| 5450 | <p>A·module·containing·classical·calibrant·and·also·tools·to·generate·d-spacing.</p> | 5450 | <p>A·module·containing·classical·calibrant·and·also·tools·to·generate·d-spacing.</p> |
| 5451 | <p>Interesting·formula: | 5451 | <p>Interesting·formula: |
| 5452 | <a·class="reference·external"·href="http://geoweb3.princeton.edu/research/MineralPhy/xtalgeometry.pdf">http://geoweb3.princeton.edu/research/MineralPhy/xtalgeometry.pdf</a></p> | 5452 | <a·class="reference·external"·href="http://geoweb3.princeton.edu/research/MineralPhy/xtalgeometry.pdf">http://geoweb3.princeton.edu/research/MineralPhy/xtalgeometry.pdf</a></p> |
| 5453 | <dl·class="py·data"> | 5453 | <dl·class="py·data"> |
| 5454 | <dt·id="pyFAI.calibrant.CALIBRANT_FACTORY"> | 5454 | <dt·id="pyFAI.calibrant.CALIBRANT_FACTORY"> |
| 5455 | <code·class="sig-prename·descclassname">pyFAI.calibrant.</code><code·class="sig-name·descname">CALIBRANT_FACTORY</code><em·class="property">·=·Calibrants·available:· | 5455 | <code·class="sig-prename·descclassname">pyFAI.calibrant.</code><code·class="sig-name·descname">CALIBRANT_FACTORY</code><em·class="property">·=·Calibrants·available:·alpha_Al2O3,·Si_SRM640e,·cristobaltite,·Si_SRM640b,·CrOx,·mock,·TiO2,·NaCl,·Si_SRM640a,·quartz,·Si,·Ni,·Al,·C14H30O,·CuO,·LaB6,·Si_SRM640,·ZnO,·Au,·AgBh,·LaB6_SRM660a,·Pt,·Si_SRM640c,·PBBA,·LaB6_SRM660c,·Si_SRM640d,·CeO2,·LaB6_SRM660b,·Cr2O3</em><a·class="headerlink"·href="#pyFAI.calibrant.CALIBRANT_FACTORY"·title="Permalink·to·this·definition">¶</a></dt> |
| 5456 | <dd><p>Default·calibration·factory·provided·by·the·library.</p> | 5456 | <dd><p>Default·calibration·factory·provided·by·the·library.</p> |
| 5457 | </dd></dl> | 5457 | </dd></dl> |
| 5458 | <dl·class="py·class"> | 5458 | <dl·class="py·class"> |
| 5459 | <dt·id="pyFAI.calibrant.Calibrant"> | 5459 | <dt·id="pyFAI.calibrant.Calibrant"> |
| 5460 | <em·class="property">class·</em><code·class="sig-prename·descclassname">pyFAI.calibrant.</code><code·class="sig-name·descname">Calibrant</code><span·class="sig-paren">(</span><em·class="sig-param"><span·class="n">filename</span><span·class="o">=</span><span·class="default_value">None</span></em>,·<em·class="sig-param"><span·class="n">dSpacing</span><span·class="o">=</span><span·class="default_value">None</span></em>,·<em·class="sig-param"><span·class="n">wavelength</span><span·class="o">=</span><span·class="default_value">None</span></em><span·class="sig-paren">)</span><a·class="headerlink"·href="#pyFAI.calibrant.Calibrant"·title="Permalink·to·this·definition">¶</a></dt> | 5460 | <em·class="property">class·</em><code·class="sig-prename·descclassname">pyFAI.calibrant.</code><code·class="sig-name·descname">Calibrant</code><span·class="sig-paren">(</span><em·class="sig-param"><span·class="n">filename</span><span·class="o">=</span><span·class="default_value">None</span></em>,·<em·class="sig-param"><span·class="n">dSpacing</span><span·class="o">=</span><span·class="default_value">None</span></em>,·<em·class="sig-param"><span·class="n">wavelength</span><span·class="o">=</span><span·class="default_value">None</span></em><span·class="sig-paren">)</span><a·class="headerlink"·href="#pyFAI.calibrant.Calibrant"·title="Permalink·to·this·definition">¶</a></dt> |
| 5461 | <dd><p>Bases:·<code·class="xref·py·py-class·docutils·literal·notranslate"><span·class="pre">object</span></code></p> | 5461 | <dd><p>Bases:·<code·class="xref·py·py-class·docutils·literal·notranslate"><span·class="pre">object</span></code></p> |
| Offset 3299, 18 lines modified | Offset 3299, 19 lines modified | ||
| 3299 | ················*·n_5·â·look·for·a·larger·neighborhood | 3299 | ················*·n_5·â·look·for·a·larger·neighborhood |
| 3300 | ··pyFAI.blob_detection.make_gaussian(im,·sigma,·xc,·yc)¶ | 3300 | ··pyFAI.blob_detection.make_gaussian(im,·sigma,·xc,·yc)¶ |
| 3301 | *****·calibrant·Module¶·***** | 3301 | *****·calibrant·Module¶·***** |
| 3302 | Calibrant | 3302 | Calibrant |
| 3303 | A·module·containing·classical·calibrant·and·also·tools·to·generate·d-spacing. | 3303 | A·module·containing·classical·calibrant·and·also·tools·to·generate·d-spacing. |
| 3304 | Interesting·formula:·http://geoweb3.princeton.edu/research/MineralPhy/ | 3304 | Interesting·formula:·http://geoweb3.princeton.edu/research/MineralPhy/ |
| 3305 | xtalgeometry.pdf | 3305 | xtalgeometry.pdf |
| 3306 | ··pyFAI.calibrant.CALIBRANT_FACTORY=·Calibrants·available:· | 3306 | ··pyFAI.calibrant.CALIBRANT_FACTORY=·Calibrants·available:·alpha_Al2O3, |
| 3307 | ··Si_SRM640e,·PBBA,·Si_SRM640b,·Si_SRM640c,·Si_SRM640a,·quartz,·C14H30O,·ZnO, | ||
| 3308 | ··Au,·AgBh,·Pt,·Si,·mock,·CrOx,·LaB6_SRM660a,·Cr2O3,·Si_SRM640d,·LaB6,·CeO2, | ||
| 3309 | ·· | 3307 | ··Si_SRM640e,·cristobaltite,·Si_SRM640b,·CrOx,·mock,·TiO2,·NaCl,·Si_SRM640a, |
| 3308 | ··quartz,·Si,·Ni,·Al,·C14H30O,·CuO,·LaB6,·Si_SRM640,·ZnO,·Au,·AgBh, | ||
| 3309 | ··LaB6_SRM660a,·Pt,·Si_SRM640c,·PBBA,·LaB6_SRM660c,·Si_SRM640d,·CeO2, | ||
| 3310 | ··LaB6_SRM660b,·Cr2O3¶ | ||
| 3310 | ······Default·calibration·factory·provided·by·the·library. | 3311 | ······Default·calibration·factory·provided·by·the·library. |
| 3311 | ··classpyFAI.calibrant.Calibrant(filename=None,·dSpacing=None, | 3312 | ··classpyFAI.calibrant.Calibrant(filename=None,·dSpacing=None, |
| 3312 | ··wavelength=None)¶ | 3313 | ··wavelength=None)¶ |
| 3313 | ······Bases:·object | 3314 | ······Bases:·object |
| 3314 | ······A·calibrant·is·a·reference·compound·where·the·d-spacing·(interplanar | 3315 | ······A·calibrant·is·a·reference·compound·where·the·d-spacing·(interplanar |
| 3315 | ······distances)·are·known.·They·are·expressed·in·Angstrom·(in·the·file) | 3316 | ······distances)·are·known.·They·are·expressed·in·Angstrom·(in·the·file) |
| 3316 | ········__init__(filename=None,·dSpacing=None,·wavelength=None)¶ | 3317 | ········__init__(filename=None,·dSpacing=None,·wavelength=None)¶ |