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1 ·d91d3f1d8ebba0cb62d19c3de8934282·6475868·debug·optional·freebayes-dbgsym_1.3.6-2_i386.deb1 ·d91d3f1d8ebba0cb62d19c3de8934282·6475868·debug·optional·freebayes-dbgsym_1.3.6-2_i386.deb
2 ·a837733ed3d790783ce9d52730971c8f·1529884·science·optional·freebayes_1.3.6-2_i386.deb2 ·90cd8400f30e1c0017333b320cb17377·1529884·science·optional·freebayes_1.3.6-2_i386.deb
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freebayes_1.3.6-2_i386.deb
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control.tar.xz
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control.tar
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./md5sums
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./md5sums
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data.tar.xz
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data.tar
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16 -rw-r--r--···0·root·········(0)·root·········(0)·······83·2022-11-01·13:38:51.000000·./usr/share/doc/freebayes/examples/README.test_data16 -rw-r--r--···0·root·········(0)·root·········(0)·······83·2022-11-01·13:38:51.000000·./usr/share/doc/freebayes/examples/README.test_data
17 drwxr-xr-x···0·root·········(0)·root·········(0)········0·2022-11-01·13:38:51.000000·./usr/share/doc/freebayes/examples/bash-tap/17 drwxr-xr-x···0·root·········(0)·root·········(0)········0·2022-11-01·13:38:51.000000·./usr/share/doc/freebayes/examples/bash-tap/
18 -rw-r--r--···0·root·········(0)·root·········(0)······109·2022-01-21·09:38:32.000000·./usr/share/doc/freebayes/examples/freebayes-env.yaml18 -rw-r--r--···0·root·········(0)·root·········(0)······109·2022-01-21·09:38:32.000000·./usr/share/doc/freebayes/examples/freebayes-env.yaml
19 drwxr-xr-x···0·root·········(0)·root·········(0)········0·2022-01-21·09:38:32.000000·./usr/share/doc/freebayes/examples/performance/19 drwxr-xr-x···0·root·········(0)·root·········(0)········0·2022-01-21·09:38:32.000000·./usr/share/doc/freebayes/examples/performance/
20 -rw-r--r--···0·root·········(0)·root·········(0)·····1652·2022-01-21·09:38:32.000000·./usr/share/doc/freebayes/examples/performance/benchmark.md20 -rw-r--r--···0·root·········(0)·root·········(0)·····1652·2022-01-21·09:38:32.000000·./usr/share/doc/freebayes/examples/performance/benchmark.md
21 -rw-r--r--···0·root·········(0)·root·········(0)······906·2022-01-21·09:38:32.000000·./usr/share/doc/freebayes/examples/pipeline.sh21 -rw-r--r--···0·root·········(0)·root·········(0)······906·2022-01-21·09:38:32.000000·./usr/share/doc/freebayes/examples/pipeline.sh
22 drwxr-xr-x···0·root·········(0)·root·········(0)········0·2022-11-01·13:38:51.000000·./usr/share/doc/freebayes/examples/regression/22 drwxr-xr-x···0·root·········(0)·root·········(0)········0·2022-11-01·13:38:51.000000·./usr/share/doc/freebayes/examples/regression/
23 -rw-r--r--···0·root·········(0)·root·········(0)····73338·2022-11-01·13:38:51.000000·./usr/share/doc/freebayes/examples/regression/NA12878.chr22.tiny.vcf23 -rw-r--r--···0·root·········(0)·root·········(0)····73339·2022-11-01·13:38:51.000000·./usr/share/doc/freebayes/examples/regression/NA12878.chr22.tiny.vcf
24 -rw-r--r--···0·root·········(0)·root·········(0)·······94·2022-01-21·09:38:32.000000·./usr/share/doc/freebayes/examples/regression/README.md24 -rw-r--r--···0·root·········(0)·root·········(0)·······94·2022-01-21·09:38:32.000000·./usr/share/doc/freebayes/examples/regression/README.md
25 -rw-r--r--···0·root·········(0)·root·········(0)······287·2022-01-21·09:38:32.000000·./usr/share/doc/freebayes/examples/runner.sh25 -rw-r--r--···0·root·········(0)·root·········(0)······287·2022-01-21·09:38:32.000000·./usr/share/doc/freebayes/examples/runner.sh
26 -rw-r--r--···0·root·········(0)·root·········(0)·····2743·2022-01-21·09:38:32.000000·./usr/share/doc/freebayes/examples/snakemake-freebayes-parallel.smk26 -rw-r--r--···0·root·········(0)·root·········(0)·····2743·2022-01-21·09:38:32.000000·./usr/share/doc/freebayes/examples/snakemake-freebayes-parallel.smk
27 drwxr-xr-x···0·root·········(0)·root·········(0)········0·2022-01-21·09:38:32.000000·./usr/share/doc/freebayes/examples/splice/27 drwxr-xr-x···0·root·········(0)·root·········(0)········0·2022-01-21·09:38:32.000000·./usr/share/doc/freebayes/examples/splice/
28 -rw-r--r--···0·root·········(0)·root·········(0)····22589·2022-01-21·09:38:32.000000·./usr/share/doc/freebayes/examples/splice/1:883884-887618.bam28 -rw-r--r--···0·root·········(0)·root·········(0)····22589·2022-01-21·09:38:32.000000·./usr/share/doc/freebayes/examples/splice/1:883884-887618.bam
29 -rw-r--r--···0·root·········(0)·root·········(0)······288·2022-01-21·09:38:32.000000·./usr/share/doc/freebayes/examples/splice/1:883884-887618.bam.bai29 -rw-r--r--···0·root·········(0)·root·········(0)······288·2022-01-21·09:38:32.000000·./usr/share/doc/freebayes/examples/splice/1:883884-887618.bam.bai
30 -rw-r--r--···0·root·········(0)·root·········(0)·····3801·2022-01-21·09:38:32.000000·./usr/share/doc/freebayes/examples/splice/1:883884-887618.fa30 -rw-r--r--···0·root·········(0)·root·········(0)·····3801·2022-01-21·09:38:32.000000·./usr/share/doc/freebayes/examples/splice/1:883884-887618.fa
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190 q»      10444» .»C»       A»      0»     .»    AB=0;ABP=0;AC=0;AF=0;AN=2;AO=2;CIGAR=1X;DP=38;DPB=38;DPRA=0;EPP=7.35324;EPPR=3.25157;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.1111;NS=1;NUMALT=1;ODDS=46.9393;PAIRED=1;PAIREDR=0.972222;PAO=0;PQA=0;PQR=0;PRO=0;QA=30;QR=1267;RO=36;RPL=1;RPP=3.0103;RPPR=6.8707;RPR=1;RUN=1;SAF=1;SAP=3.0103;SAR=1;SRF=17;SRP=3.25157;SRR=19;TYPE=snp;technology.ILLUMINA=1»    GT:DP:AD:RO:QR:AO:QA:GL»     0/0:38:36,2:36:1267:2:30:0,-8.58916,-111.153190 q»      10444» .»C»       A»      0»     .»    AB=0;ABP=0;AC=0;AF=0;AN=2;AO=2;CIGAR=1X;DP=38;DPB=38;DPRA=0;EPP=7.35324;EPPR=3.25157;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.1111;NS=1;NUMALT=1;ODDS=46.9393;PAIRED=1;PAIREDR=0.972222;PAO=0;PQA=0;PQR=0;PRO=0;QA=30;QR=1267;RO=36;RPL=1;RPP=3.0103;RPPR=6.8707;RPR=1;RUN=1;SAF=1;SAP=3.0103;SAR=1;SRF=17;SRP=3.25157;SRR=19;TYPE=snp;technology.ILLUMINA=1»    GT:DP:AD:RO:QR:AO:QA:GL»     0/0:38:36,2:36:1267:2:30:0,-8.58916,-111.153
191 q»      10469» .»T»       A»      9.71179e-15»   .»  AB=0;ABP=0;AC=0;AF=0;AN=2;AO=2;CIGAR=1X;DP=32;DPB=32;DPRA=0;EPP=7.35324;EPPR=13.4334;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.6;NS=1;NUMALT=1;ODDS=36.421;PAIRED=1;PAIREDR=0.966667;PAO=0;PQA=0;PQR=0;PRO=0;QA=48;QR=968;RO=30;RPL=0;RPP=7.35324;RPPR=5.61607;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=15;SRP=3.0103;SRR=15;TYPE=snp;technology.ILLUMINA=1»     GT:DP:AD:RO:QR:AO:QA:GL»      0/0:32:30,2:30:968:2:48:0,-5.07379,-82.8316191 q»      10469» .»T»       A»      9.70425e-15»   .»  AB=0;ABP=0;AC=0;AF=0;AN=2;AO=2;CIGAR=1X;DP=32;DPB=32;DPRA=0;EPP=7.35324;EPPR=13.4334;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.6;NS=1;NUMALT=1;ODDS=36.421;PAIRED=1;PAIREDR=0.966667;PAO=0;PQA=0;PQR=0;PRO=0;QA=48;QR=968;RO=30;RPL=0;RPP=7.35324;RPPR=5.61607;RPR=2;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=15;SRP=3.0103;SRR=15;TYPE=snp;technology.ILLUMINA=1»     GT:DP:AD:RO:QR:AO:QA:GL»      0/0:32:30,2:30:968:2:48:0,-5.07379,-82.8316
192 q»      10494» .»T»       A»      9.59124e-15»   .»  AB=0;ABP=0;AC=0;AF=0;AN=2;AO=2;CIGAR=1X;DP=33;DPB=33;DPRA=0;EPP=3.0103;EPPR=6.44263;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=1;NUMALT=1;ODDS=38.3256;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=39;QR=980;RO=31;RPL=0;RPP=7.35324;RPPR=3.08035;RPR=2;RUN=1;SAF=1;SAP=3.0103;SAR=1;SRF=13;SRP=4.76149;SRR=18;TYPE=snp;technology.ILLUMINA=1»      GT:DP:AD:RO:QR:AO:QA:GL»       0/0:33:31,2:31:980:2:39:0,-6.22911,-84.7558192 q»      10494» .»T»       A»      9.59124e-15»   .»  AB=0;ABP=0;AC=0;AF=0;AN=2;AO=2;CIGAR=1X;DP=33;DPB=33;DPRA=0;EPP=3.0103;EPPR=6.44263;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=1;NUMALT=1;ODDS=38.3256;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=39;QR=980;RO=31;RPL=0;RPP=7.35324;RPPR=3.08035;RPR=2;RUN=1;SAF=1;SAP=3.0103;SAR=1;SRF=13;SRP=4.76149;SRR=18;TYPE=snp;technology.ILLUMINA=1»      GT:DP:AD:RO:QR:AO:QA:GL»       0/0:33:31,2:31:980:2:39:0,-6.22911,-84.7558
193 q»      10500» .»C»       A»      1.27856e-14»   .»  AB=0;ABP=0;AC=0;AF=0;AN=2;AO=2;CIGAR=1X;DP=34;DPB=34;DPRA=0;EPP=3.0103;EPPR=9.79615;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=1;NUMALT=1;ODDS=39.6512;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=39;QR=967;RO=32;RPL=1;RPP=3.0103;RPPR=3.28173;RPR=1;RUN=1;SAF=0;SAP=7.35324;SAR=2;SRF=14;SRP=4.09604;SRR=18;TYPE=snp;technology.ILLUMINA=1»      GT:DP:AD:RO:QR:AO:QA:GL»       0/0:34:32,2:32:967:2:39:0,-6.53014,-83.5841193 q»      10500» .»C»       A»      1.27856e-14»   .»  AB=0;ABP=0;AC=0;AF=0;AN=2;AO=2;CIGAR=1X;DP=34;DPB=34;DPRA=0;EPP=3.0103;EPPR=9.79615;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=1;NUMALT=1;ODDS=39.6512;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=39;QR=967;RO=32;RPL=1;RPP=3.0103;RPPR=3.28173;RPR=1;RUN=1;SAF=0;SAP=7.35324;SAR=2;SRF=14;SRP=4.09604;SRR=18;TYPE=snp;technology.ILLUMINA=1»      GT:DP:AD:RO:QR:AO:QA:GL»       0/0:34:32,2:32:967:2:39:0,-6.53014,-83.5841
194 q»      10506» .»G»       A»      9.03327e-15»   .»  AB=0;ABP=0;AC=0;AF=0;AN=2;AO=2;CIGAR=1X;DP=32;DPB=32;DPRA=0;EPP=3.0103;EPPR=7.64277;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=1;NUMALT=1;ODDS=37.6579;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=36;QR=895;RO=30;RPL=0;RPP=7.35324;RPPR=4.16842;RPR=2;RUN=1;SAF=1;SAP=3.0103;SAR=1;SRF=12;SRP=5.61607;SRR=18;TYPE=snp;technology.ILLUMINA=1»      GT:DP:AD:RO:QR:AO:QA:GL»       0/0:32:30,2:30:895:2:36:0,-6.21302,-77.38194 q»      10506» .»G»       A»      9.03327e-15»   .»  AB=0;ABP=0;AC=0;AF=0;AN=2;AO=2;CIGAR=1X;DP=32;DPB=32;DPRA=0;EPP=3.0103;EPPR=7.64277;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=1;NUMALT=1;ODDS=37.6579;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=36;QR=895;RO=30;RPL=0;RPP=7.35324;RPPR=4.16842;RPR=2;RUN=1;SAF=1;SAP=3.0103;SAR=1;SRF=12;SRP=5.61607;SRR=18;TYPE=snp;technology.ILLUMINA=1»      GT:DP:AD:RO:QR:AO:QA:GL»       0/0:32:30,2:30:895:2:36:0,-6.21302,-77.38
195 q»      10508» .»T»       A»      6.76541e-14»   .»  AB=0;ABP=0;AC=0;AF=0;AN=2;AO=4;CIGAR=1X;DP=32;DPB=32;DPRA=0;EPP=11.6962;EPPR=14.1779;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=1;NUMALT=1;ODDS=32.0982;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=69;QR=885;RO=28;RPL=0;RPP=11.6962;RPPR=3.32051;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=9;SRP=10.7656;SRR=19;TYPE=snp;technology.ILLUMINA=1»     GT:DP:AD:RO:QR:AO:QA:GL»      0/0:32:28,4:28:885:4:69:0,-3.25056,-73.5337195 q»      10508» .»T»       A»      6.76541e-14»   .»  AB=0;ABP=0;AC=0;AF=0;AN=2;AO=4;CIGAR=1X;DP=32;DPB=32;DPRA=0;EPP=11.6962;EPPR=14.1779;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=1;NUMALT=1;ODDS=32.0982;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=69;QR=885;RO=28;RPL=0;RPP=11.6962;RPPR=3.32051;RPR=4;RUN=1;SAF=4;SAP=11.6962;SAR=0;SRF=9;SRP=10.7656;SRR=19;TYPE=snp;technology.ILLUMINA=1»     GT:DP:AD:RO:QR:AO:QA:GL»      0/0:32:28,4:28:885:4:69:0,-3.25056,-73.5337
196 q»      10529» .»C»       A»      1.23994e-12»   .»  AB=0;ABP=0;AC=0;AF=0;AN=2;AO=2;CIGAR=1X;DP=26;DPB=26;DPRA=0;EPP=3.0103;EPPR=3.0103;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=1;NUMALT=1;ODDS=28.8881;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=40;QR=629;RO=24;RPL=1;RPP=3.0103;RPPR=4.45795;RPR=1;RUN=1;SAF=0;SAP=7.35324;SAR=2;SRF=12;SRP=3.0103;SRR=12;TYPE=snp;technology.ILLUMINA=1»GT:DP:AD:RO:QR:AO:QA:GL» 0/0:26:24,2:24:629:2:40:0,-4.02692,-53.0437196 q»      10529» .»C»       A»      1.23994e-12»   .»  AB=0;ABP=0;AC=0;AF=0;AN=2;AO=2;CIGAR=1X;DP=26;DPB=26;DPRA=0;EPP=3.0103;EPPR=3.0103;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=1;NUMALT=1;ODDS=28.8881;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=40;QR=629;RO=24;RPL=1;RPP=3.0103;RPPR=4.45795;RPR=1;RUN=1;SAF=0;SAP=7.35324;SAR=2;SRF=12;SRP=3.0103;SRR=12;TYPE=snp;technology.ILLUMINA=1»GT:DP:AD:RO:QR:AO:QA:GL» 0/0:26:24,2:24:629:2:40:0,-4.02692,-53.0437
197 q»      10532» .»C»       A»      202.011»       .»      AB=0.407407;ABP=5.02092;AC=1;AF=0.5;AN=2;AO=11;CIGAR=1X;DP=27;DPB=27;DPRA=0;EPP=3.20771;EPPR=3.55317;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=1;NUMALT=1;ODDS=46.5147;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=368;QR=484;RO=16;RPL=6;RPP=3.20771;RPPR=5.18177;RPR=5;RUN=1;SAF=4;SAP=4.78696;SAR=7;SRF=9;SRP=3.55317;SRR=7;TYPE=snp;technology.ILLUMINA=1» GT:DP:AD:RO:QR:AO:QA:GL»  0/1:27:16,11:16:484:11:368:-25.2999,0,-35.7067197 q»      10532» .»C»       A»      202.011»       .»      AB=0.407407;ABP=5.02092;AC=1;AF=0.5;AN=2;AO=11;CIGAR=1X;DP=27;DPB=27;DPRA=0;EPP=3.20771;EPPR=3.55317;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=1;NUMALT=1;ODDS=46.5147;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=368;QR=484;RO=16;RPL=6;RPP=3.20771;RPPR=5.18177;RPR=5;RUN=1;SAF=4;SAP=4.78696;SAR=7;SRF=9;SRP=3.55317;SRR=7;TYPE=snp;technology.ILLUMINA=1» GT:DP:AD:RO:QR:AO:QA:GL»  0/1:27:16,11:16:484:11:368:-25.2999,0,-35.7067
198 q»      10541» .»G»       A»      7.34553e-14»   .»  AB=0;ABP=0;AC=0;AF=0;AN=2;AO=2;CIGAR=1X;DP=29;DPB=29;DPRA=0;EPP=7.35324;EPPR=5.02092;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=1;NUMALT=1;ODDS=31.8062;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=51;QR=924;RO=27;RPL=2;RPP=7.35324;RPPR=3.09072;RPR=0;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=12;SRP=3.73412;SRR=15;TYPE=snp;technology.ILLUMINA=1»    GT:DP:AD:RO:QR:AO:QA:GL»     0/0:29:27,2:27:924:2:51:0,-3.88572,-78.5982198 q»      10541» .»G»       A»      7.34553e-14»   .»  AB=0;ABP=0;AC=0;AF=0;AN=2;AO=2;CIGAR=1X;DP=29;DPB=29;DPRA=0;EPP=7.35324;EPPR=5.02092;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=1;NUMALT=1;ODDS=31.8062;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=51;QR=924;RO=27;RPL=2;RPP=7.35324;RPPR=3.09072;RPR=0;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=12;SRP=3.73412;SRR=15;TYPE=snp;technology.ILLUMINA=1»    GT:DP:AD:RO:QR:AO:QA:GL»     0/0:29:27,2:27:924:2:51:0,-3.88572,-78.5982
199 q»      10553» .»C»       A»      7.28166e-15»   .»  AB=0;ABP=0;AC=0;AF=0;AN=2;AO=2;CIGAR=1X;DP=31;DPB=31;DPRA=0;EPP=7.35324;EPPR=9.07545;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=1;NUMALT=1;ODDS=39.0348;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=30;QR=879;RO=29;RPL=2;RPP=7.35324;RPPR=3.08518;RPR=0;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=14;SRP=3.08518;SRR=15;TYPE=snp;technology.ILLUMINA=1»    GT:DP:AD:RO:QR:AO:QA:GL»     0/0:31:29,2:29:879:2:30:0,-6.48195,-76.518199 q»      10553» .»C»       A»      7.28166e-15»   .»  AB=0;ABP=0;AC=0;AF=0;AN=2;AO=2;CIGAR=1X;DP=31;DPB=31;DPRA=0;EPP=7.35324;EPPR=9.07545;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=1;NUMALT=1;ODDS=39.0348;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=30;QR=879;RO=29;RPL=2;RPP=7.35324;RPPR=3.08518;RPR=0;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=14;SRP=3.08518;SRR=15;TYPE=snp;technology.ILLUMINA=1»    GT:DP:AD:RO:QR:AO:QA:GL»     0/0:31:29,2:29:879:2:30:0,-6.48195,-76.518
200 q»      10570» .»T»       A»      2.17581e-14»   .»  AB=0;ABP=0;AC=0;AF=0;AN=2;AO=3;CIGAR=1X;DP=31;DPB=31;DPRA=0;EPP=3.73412;EPPR=22.8638;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=1;NUMALT=1;ODDS=33.5399;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=45;QR=854;RO=28;RPL=3;RPP=9.52472;RPPR=4.25114;RPR=0;RUN=1;SAF=2;SAP=3.73412;SAR=1;SRF=14;SRP=3.0103;SRR=14;TYPE=snp;technology.ILLUMINA=1»     GT:DP:AD:RO:QR:AO:QA:GL»      0/0:31:28,3:28:854:3:45:0,-5.13197,-72.9214200 q»      10570» .»T»       A»      2.17581e-14»   .»  AB=0;ABP=0;AC=0;AF=0;AN=2;AO=3;CIGAR=1X;DP=31;DPB=31;DPRA=0;EPP=3.73412;EPPR=22.8638;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=1;NUMALT=1;ODDS=33.5399;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=45;QR=854;RO=28;RPL=3;RPP=9.52472;RPPR=4.25114;RPR=0;RUN=1;SAF=2;SAP=3.73412;SAR=1;SRF=14;SRP=3.0103;SRR=14;TYPE=snp;technology.ILLUMINA=1»     GT:DP:AD:RO:QR:AO:QA:GL»      0/0:31:28,3:28:854:3:45:0,-5.13197,-72.9214
201 q»      10638» .»A»       G»      1.5648e-14»    .»   AB=0;ABP=0;AC=0;AF=0;AN=2;AO=3;CIGAR=1X;DP=37;DPB=37;DPRA=0;EPP=9.52472;EPPR=3.26577;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=1;NUMALT=1;ODDS=38.1368;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=70;QR=1247;RO=34;RPL=0;RPP=9.52472;RPPR=9.39698;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=24;SRP=15.5282;SRR=10;TYPE=snp;technology.ILLUMINA=1»    GT:DP:AD:RO:QR:AO:QA:GL»     0/0:37:34,3:34:1247:3:70:0,-4.60566,-105.977201 q»      10638» .»A»       G»      1.56404e-14»   .»  AB=0;ABP=0;AC=0;AF=0;AN=2;AO=3;CIGAR=1X;DP=37;DPB=37;DPRA=0;EPP=9.52472;EPPR=3.26577;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=1;NUMALT=1;ODDS=38.1368;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=70;QR=1247;RO=34;RPL=0;RPP=9.52472;RPPR=9.39698;RPR=3;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=24;SRP=15.5282;SRR=10;TYPE=snp;technology.ILLUMINA=1»   GT:DP:AD:RO:QR:AO:QA:GL»    0/0:37:34,3:34:1247:3:70:0,-4.60566,-105.977
202 q»      11080» .»A»       C»      0»     .»    AB=0;ABP=0;AC=0;AF=0;AN=2;AO=2;CIGAR=1X;DP=36;DPB=36;DPRA=0;EPP=7.35324;EPPR=5.30951;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=1;NUMALT=1;ODDS=41.6518;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=42;QR=1270;RO=34;RPL=1;RPP=3.0103;RPPR=15.5282;RPR=1;RUN=1;SAF=1;SAP=3.0103;SAR=1;SRF=24;SRP=15.5282;SRR=10;TYPE=snp;technology.ILLUMINA=1»       GT:DP:AD:RO:QR:AO:QA:GL»0/0:36:34,2:34:1270:2:42:0,-6.8473,-110.587202 q»      11080» .»A»       C»      0»     .»    AB=0;ABP=0;AC=0;AF=0;AN=2;AO=2;CIGAR=1X;DP=36;DPB=36;DPRA=0;EPP=7.35324;EPPR=5.30951;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=1;NUMALT=1;ODDS=41.6518;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=42;QR=1270;RO=34;RPL=1;RPP=3.0103;RPPR=15.5282;RPR=1;RUN=1;SAF=1;SAP=3.0103;SAR=1;SRF=24;SRP=15.5282;SRR=10;TYPE=snp;technology.ILLUMINA=1»       GT:DP:AD:RO:QR:AO:QA:GL»0/0:36:34,2:34:1270:2:42:0,-6.8473,-110.587
203 q»      11108» .»A»       G»      1.89558e-14»   .»  AB=0;ABP=0;AC=0;AF=0;AN=2;AO=2;CIGAR=1X;DP=33;DPB=33;DPRA=0;EPP=3.0103;EPPR=3.29983;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=1;NUMALT=1;ODDS=37.0748;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=41;QR=1060;RO=30;RPL=2;RPP=7.35324;RPPR=13.4334;RPR=0;RUN=1;SAF=1;SAP=3.0103;SAR=1;SRF=21;SRP=13.4334;SRR=9;TYPE=snp;technology.ILLUMINA=1»      GT:DP:AD:RO:QR:AO:QA:GL»       0/0:33:30,2:30:1060:2:41:0,-5.95976,-91.7692203 q»      11108» .»A»       G»      1.89558e-14»   .»  AB=0;ABP=0;AC=0;AF=0;AN=2;AO=2;CIGAR=1X;DP=33;DPB=33;DPRA=0;EPP=3.0103;EPPR=3.29983;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=60;NS=1;NUMALT=1;ODDS=37.0748;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=41;QR=1060;RO=30;RPL=2;RPP=7.35324;RPPR=13.4334;RPR=0;RUN=1;SAF=1;SAP=3.0103;SAR=1;SRF=21;SRP=13.4334;SRR=9;TYPE=snp;technology.ILLUMINA=1»      GT:DP:AD:RO:QR:AO:QA:GL»       0/0:33:30,2:30:1060:2:41:0,-5.95976,-91.7692
204 q»      11247» .»A»       C»      0»     .»    AB=0;ABP=0;AC=0;AF=0;AN=2;AO=2;CIGAR=1X;DP=40;DPB=40;DPRA=0;EPP=7.35324;EPPR=3.23888;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=1;NUMALT=1;ODDS=49.6079;PAIRED=1;PAIREDR=0.947368;PAO=0;PQA=0;PQR=0;PRO=0;QA=30;QR=1255;RO=38;RPL=1;RPP=3.0103;RPPR=3.23888;RPR=1;RUN=1;SAF=1;SAP=3.0103;SAR=1;SRF=18;SRP=3.23888;SRR=20;TYPE=snp;technology.ILLUMINA=1»GT:DP:AD:RO:QR:AO:QA:GL» 0/0:40:38,2:38:1255:2:30:0,-9.19122,-110.355204 q»      11247» .»A»       C»      0»     .»    AB=0;ABP=0;AC=0;AF=0;AN=2;AO=2;CIGAR=1X;DP=40;DPB=40;DPRA=0;EPP=7.35324;EPPR=3.23888;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=1;NUMALT=1;ODDS=49.6079;PAIRED=1;PAIREDR=0.947368;PAO=0;PQA=0;PQR=0;PRO=0;QA=30;QR=1255;RO=38;RPL=1;RPP=3.0103;RPPR=3.23888;RPR=1;RUN=1;SAF=1;SAP=3.0103;SAR=1;SRF=18;SRP=3.23888;SRR=20;TYPE=snp;technology.ILLUMINA=1»GT:DP:AD:RO:QR:AO:QA:GL» 0/0:40:38,2:38:1255:2:30:0,-9.19122,-110.355
205 q»      11261» .»T»       C»      466.929»       .»      AB=0.571429;ABP=4.56135;AC=1;AF=0.5;AN=2;AO=20;CIGAR=1X;DP=35;DPB=35;DPRA=0;EPP=3.0103;EPPR=4.31318;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=1;NUMALT=1;ODDS=67.8739;PAIRED=0.95;PAIREDR=0.933333;PAO=0;PQA=0;PQR=0;PRO=0;QA=696;QR=502;RO=15;RPL=7;RPP=6.91895;RPPR=4.31318;RPR=13;RUN=1;SAF=9;SAP=3.44459;SAR=11;SRF=6;SRP=4.31318;SRR=9;TYPE=snp;technology.ILLUMINA=1»      GT:DP:AD:RO:QR:AO:QA:GL»       0/1:35:15,20:15:502:20:696:-52.3979,0,-34.9499205 q»      11261» .»T»       C»      466.929»       .»      AB=0.571429;ABP=4.56135;AC=1;AF=0.5;AN=2;AO=20;CIGAR=1X;DP=35;DPB=35;DPRA=0;EPP=3.0103;EPPR=4.31318;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=1;NUMALT=1;ODDS=67.8739;PAIRED=0.95;PAIREDR=0.933333;PAO=0;PQA=0;PQR=0;PRO=0;QA=696;QR=502;RO=15;RPL=7;RPP=6.91895;RPPR=4.31318;RPR=13;RUN=1;SAF=9;SAP=3.44459;SAR=11;SRF=6;SRP=4.31318;SRR=9;TYPE=snp;technology.ILLUMINA=1»      GT:DP:AD:RO:QR:AO:QA:GL»       0/1:35:15,20:15:502:20:696:-52.3979,0,-34.9499
206 q»      11334» .»G»       T»      8.9657e-15»    .»   AB=0;ABP=0;AC=0;AF=0;AN=2;AO=3;CIGAR=1X;DP=42;DPB=42;DPRA=0;EPP=9.52472;EPPR=3.06598;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=1;NUMALT=1;ODDS=39.9619;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=92;QR=1347;RO=39;RPL=3;RPP=9.52472;RPPR=5.73856;RPR=0;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=17;SRP=4.40227;SRR=22;TYPE=snp;technology.ILLUMINA=1»    GT:DP:AD:RO:QR:AO:QA:GL»     0/0:42:39,3:39:1347:3:92:0,-4.06266,-112.904206 q»      11334» .»G»       T»      8.9657e-15»    .»   AB=0;ABP=0;AC=0;AF=0;AN=2;AO=3;CIGAR=1X;DP=42;DPB=42;DPRA=0;EPP=9.52472;EPPR=3.06598;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=1;NUMALT=1;ODDS=39.9619;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=92;QR=1347;RO=39;RPL=3;RPP=9.52472;RPPR=5.73856;RPR=0;RUN=1;SAF=3;SAP=9.52472;SAR=0;SRF=17;SRP=4.40227;SRR=22;TYPE=snp;technology.ILLUMINA=1»    GT:DP:AD:RO:QR:AO:QA:GL»     0/0:42:39,3:39:1347:3:92:0,-4.06266,-112.904
207 q»      11492» .»C»       A»      1.93169e-14»   .»  AB=0;ABP=0;AC=0;AF=0;AN=2;AO=2;CIGAR=1X;DP=32;DPB=32;DPRA=0;EPP=7.35324;EPPR=21.5402;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=1;NUMALT=1;ODDS=34.8974;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=55;QR=1122;RO=30;RPL=2;RPP=7.35324;RPPR=3.29983;RPR=0;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=17;SRP=4.16842;SRR=13;TYPE=snp;technology.ILLUMINA=1»   GT:DP:AD:RO:QR:AO:QA:GL»    0/0:32:30,2:30:1122:2:55:0,-4.41208,-96.0481207 q»      11492» .»C»       A»      1.93169e-14»   .»  AB=0;ABP=0;AC=0;AF=0;AN=2;AO=2;CIGAR=1X;DP=32;DPB=32;DPRA=0;EPP=7.35324;EPPR=21.5402;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=1;NUMALT=1;ODDS=34.8974;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=55;QR=1122;RO=30;RPL=2;RPP=7.35324;RPPR=3.29983;RPR=0;RUN=1;SAF=2;SAP=7.35324;SAR=0;SRF=17;SRP=4.16842;SRR=13;TYPE=snp;technology.ILLUMINA=1»   GT:DP:AD:RO:QR:AO:QA:GL»    0/0:32:30,2:30:1122:2:55:0,-4.41208,-96.0481
208 q»      11536» .»T»       C»      648.81».»       AB=0.648649;ABP=10.1116;AC=1;AF=0.5;AN=2;AO=24;CIGAR=1X;DP=37;DPB=37;DPRA=0;EPP=4.45795;EPPR=3.17734;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=1;NUMALT=1;ODDS=53.8563;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=913;QR=444;RO=13;RPL=11;RPP=3.37221;RPPR=3.17734;RPR=13;RUN=1;SAF=15;SAP=6.26751;SAR=9;SRF=8;SRP=4.51363;SRR=5;TYPE=snp;technology.ILLUMINA=1»       GT:DP:AD:RO:QR:AO:QA:GL»0/1:37:13,24:13:444:24:913:-71.3353,0,-29.1374208 q»      11536» .»T»       C»      648.81».»       AB=0.648649;ABP=10.1116;AC=1;AF=0.5;AN=2;AO=24;CIGAR=1X;DP=37;DPB=37;DPRA=0;EPP=4.45795;EPPR=3.17734;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=1;NUMALT=1;ODDS=53.8563;PAIRED=1;PAIREDR=1;PAO=0;PQA=0;PQR=0;PRO=0;QA=913;QR=444;RO=13;RPL=11;RPP=3.37221;RPPR=3.17734;RPR=13;RUN=1;SAF=15;SAP=6.26751;SAR=9;SRF=8;SRP=4.51363;SRR=5;TYPE=snp;technology.ILLUMINA=1»       GT:DP:AD:RO:QR:AO:QA:GL»0/1:37:13,24:13:444:24:913:-71.3353,0,-29.1374
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