Tue Apr 23 09:15:07 UTC 2024 I: starting to build opentsne/unstable/i386 on jenkins on '2024-04-23 09:14' Tue Apr 23 09:15:07 UTC 2024 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/i386_12/8818/console.log Tue Apr 23 09:15:07 UTC 2024 I: Downloading source for unstable/opentsne=1.0.0-1 --2024-04-23 09:15:07-- http://deb.debian.org/debian/pool/main/o/opentsne/opentsne_1.0.0-1.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2535 (2.5K) [text/prs.lines.tag] Saving to: ‘opentsne_1.0.0-1.dsc’ 0K .. 100% 316M=0s 2024-04-23 09:15:07 (316 MB/s) - ‘opentsne_1.0.0-1.dsc’ saved [2535/2535] Tue Apr 23 09:15:07 UTC 2024 I: opentsne_1.0.0-1.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: opentsne Binary: python3-opentsne Architecture: any Version: 1.0.0-1 Maintainer: Debian PaN Maintainers Uploaders: Debian Science Maintainers , Sebastien Delafond , Picca Frédéric-Emmanuel , Homepage: https://github.com/pavlin-policar/openTSNE Standards-Version: 4.6.2 Vcs-Browser: https://salsa.debian.org/science-team/opentsne Vcs-Git: https://salsa.debian.org/science-team/opentsne.git Testsuite: autopkgtest Testsuite-Triggers: python3-all, python3-pytest, python3-pytest-runner Build-Depends: cython3, debhelper-compat (= 13), dh-python, dh-sequence-numpy3, dh-sequence-python3, libfftw3-dev, pybuild-plugin-pyproject, python3-all-dev, python3-numpy, python3-pytest, python3-pytest-runner, python3-scipy, python3-setuptools, python3-sklearn Package-List: python3-opentsne deb python optional arch=any Checksums-Sha1: 244a87f6d7d657fd46af1d701fd298c47f138bcf 22643133 opentsne_1.0.0.orig.tar.gz a8c26c585715c789d6c1af3408d61216276966ed 3408 opentsne_1.0.0-1.debian.tar.xz Checksums-Sha256: 31de08ea24dbfccec756535d5b9c3aa72cdcaad1bad2f505de6993328743f4f0 22643133 opentsne_1.0.0.orig.tar.gz 4da2f0655295bb2a969c1325b6c37a27a24e571a61a77b6d6c3afae12fc2ab4b 3408 opentsne_1.0.0-1.debian.tar.xz Files: c3a837f60429d36cdae70c7ed08977ec 22643133 opentsne_1.0.0.orig.tar.gz 60e12597be8ee35fed40cb91c6fe7414 3408 opentsne_1.0.0-1.debian.tar.xz Dgit: eaea9923313de02d3ed794b05beeb3bc0a32f6bd debian archive/debian/1.0.0-1 https://git.dgit.debian.org/opentsne -----BEGIN PGP SIGNATURE----- iQJFBAEBCgAvFiEE2bRTt5m4gw2UXmoKW/VOXhK5ALsFAmT/KQIRHHBpY2NhQGRl Ymlhbi5vcmcACgkQW/VOXhK5ALvhsBAAxiMbcQF5CLMtKCOmBqSNUZdkGvR1Nz4w Yag+n9/WVa6Oz7RBgc5VPLQbyFz4+let1AMcG25evkGkXtbI8q9Kjm7uuayoUKak 5NlHcldWUnDJo2HV0pwh5uBd72B8rtK0gnF+iFyNhAKZP6FAJnzWbl6joSXBgzm6 Cyw+hwPVARIjdzSLK8q1A+hbKNaheweHQUTJhOiw8Qr/UsCneS5xVjXeEA2J+u4c AVagVskGmPqmZ4PD0AwZ0Z1uoODrA87yYu/Ni8i9V0N3YIt+uBKeHimWQyqfJNX+ 7YpC17g3TSWtoRD7K7ZKazLvsSAo203vPKyUakUGzh7aazNWe3dVlvMYGyg9AFPe pQN7gZm216Qal4hi3G8LDJT3F/DzBlOUktgtp0cIbKm4JdAInJG1EH390NR6mS4c AYmB3ks4RuxysbJ49Wv88Wwl9lgz3UOMXrEDUoW04SCvFG0P3VlYNEsYcXNtf4WF 6lt3aeSZbJobdl52K5jbz9TFk5+UeWMRY6Uv8fBJtrAFobzMjlqR3a9IsT3HsuVm 0lGIzLtOYjGQ3A9w/WT8l6KNImDc5pGWsrlOXHHRPjsmskcqseWvM/wVt4UB+MCO kYKP2dz104IaP9gMdSQB95mljsUksa43Fner1GGFo2iEoz1R4e0fOoH7xk9zxIRr 14lhx728JZU= =cK9b -----END PGP SIGNATURE----- Tue Apr 23 09:15:07 UTC 2024 I: Checking whether the package is not for us Tue Apr 23 09:15:07 UTC 2024 I: Starting 1st build on remote node ionos12-i386.debian.net. Tue Apr 23 09:15:07 UTC 2024 I: Preparing to do remote build '1' on ionos12-i386.debian.net. Tue Apr 23 09:17:50 UTC 2024 I: Deleting $TMPDIR on ionos12-i386.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Mon Apr 22 21:15:11 -12 2024 I: pbuilder-time-stamp: 1713863711 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: using eatmydata during job I: Copying source file I: copying [opentsne_1.0.0-1.dsc] I: copying [./opentsne_1.0.0.orig.tar.gz] I: copying [./opentsne_1.0.0-1.debian.tar.xz] I: Extracting source gpgv: Signature made Mon Sep 11 14:49:38 2023 gpgv: using RSA key D9B453B799B8830D945E6A0A5BF54E5E12B900BB gpgv: issuer "picca@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./opentsne_1.0.0-1.dsc: no acceptable signature found dpkg-source: info: extracting opentsne in opentsne-1.0.0 dpkg-source: info: unpacking opentsne_1.0.0.orig.tar.gz dpkg-source: info: unpacking opentsne_1.0.0-1.debian.tar.xz I: using fakeroot in build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/15179/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='i386' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=11 ' DISTRIBUTION='unstable' HOME='/root' HOST_ARCH='i386' IFS=' ' INVOCATION_ID='23c3762a85ab480092c9c67c65152e25' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' LD_LIBRARY_PATH='/usr/lib/libeatmydata' LD_PRELOAD='libeatmydata.so' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='15179' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.vjmtGZlw/pbuilderrc_sUjh --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.vjmtGZlw/b1 --logfile b1/build.log opentsne_1.0.0-1.dsc' SUDO_GID='112' SUDO_UID='107' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://46.16.76.132:3128' I: uname -a Linux ionos12-i386 6.1.0-20-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.85-1 (2024-04-11) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Apr 23 07:42 /bin -> usr/bin I: user script /srv/workspace/pbuilder/15179/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: i386 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: cython3, debhelper-compat (= 13), dh-python, dh-sequence-numpy3, dh-sequence-python3, libfftw3-dev, pybuild-plugin-pyproject, python3-all-dev, python3-numpy, python3-pytest, python3-pytest-runner, python3-scipy, python3-setuptools, python3-sklearn dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19681 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on cython3; however: Package cython3 is not installed. pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on dh-python; however: Package dh-python is not installed. pbuilder-satisfydepends-dummy depends on dh-sequence-numpy3; however: Package dh-sequence-numpy3 is not installed. pbuilder-satisfydepends-dummy depends on dh-sequence-python3; however: Package dh-sequence-python3 is not installed. pbuilder-satisfydepends-dummy depends on libfftw3-dev; however: Package libfftw3-dev is not installed. pbuilder-satisfydepends-dummy depends on pybuild-plugin-pyproject; however: Package pybuild-plugin-pyproject is not installed. pbuilder-satisfydepends-dummy depends on python3-all-dev; however: Package python3-all-dev is not installed. pbuilder-satisfydepends-dummy depends on python3-numpy; however: Package python3-numpy is not installed. pbuilder-satisfydepends-dummy depends on python3-pytest; however: Package python3-pytest is not installed. pbuilder-satisfydepends-dummy depends on python3-pytest-runner; however: Package python3-pytest-runner is not installed. pbuilder-satisfydepends-dummy depends on python3-scipy; however: Package python3-scipy is not installed. pbuilder-satisfydepends-dummy depends on python3-setuptools; however: Package python3-setuptools is not installed. pbuilder-satisfydepends-dummy depends on python3-sklearn; however: Package python3-sklearn is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} cython3{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libblas3{a} libdebhelper-perl{a} libelf1t64{a} libexpat1{a} libexpat1-dev{a} libfftw3-bin{a} libfftw3-dev{a} libfftw3-double3{a} libfftw3-long3{a} libfftw3-quad3{a} libfftw3-single3{a} libfile-stripnondeterminism-perl{a} libgfortran5{a} libicu72{a} libjs-jquery{a} libjs-sphinxdoc{a} libjs-underscore{a} liblapack3{a} liblbfgsb0{a} libmagic-mgc{a} libmagic1t64{a} libpipeline1{a} libproc2-0{a} libpython3-all-dev{a} libpython3-dev{a} libpython3-stdlib{a} libpython3.11-dev{a} libpython3.11-minimal{a} libpython3.11-stdlib{a} libpython3.11t64{a} libpython3.12-dev{a} libpython3.12-minimal{a} libpython3.12-stdlib{a} libpython3.12t64{a} libreadline8t64{a} libsub-override-perl{a} libtool{a} libuchardet0{a} libxml2{a} m4{a} man-db{a} media-types{a} netbase{a} po-debconf{a} procps{a} pybuild-plugin-pyproject{a} python3{a} python3-all{a} python3-all-dev{a} python3-build{a} python3-decorator{a} python3-dev{a} python3-distutils{a} python3-iniconfig{a} python3-installer{a} python3-joblib{a} python3-lib2to3{a} python3-minimal{a} python3-numpy{a} python3-packaging{a} python3-pkg-resources{a} python3-pluggy{a} python3-pyproject-hooks{a} python3-pytest{a} python3-pytest-runner{a} python3-scipy{a} python3-setuptools{a} python3-sklearn{a} python3-sklearn-lib{a} python3-threadpoolctl{a} python3-toml{a} python3-wheel{a} python3.11{a} python3.11-dev{a} python3.11-minimal{a} python3.12{a} python3.12-dev{a} python3.12-minimal{a} readline-common{a} sensible-utils{a} tzdata{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl javascript-common libarchive-cpio-perl libltdl-dev libmail-sendmail-perl lynx psmisc python3-matplotlib python3-pil python3-psutil python3-pygments python3-simplejson wget 0 packages upgraded, 99 newly installed, 0 to remove and 0 not upgraded. Need to get 96.3 MB of archives. After unpacking 451 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian unstable/main i386 libpython3.11-minimal i386 3.11.9-1 [817 kB] Get: 2 http://deb.debian.org/debian unstable/main i386 libexpat1 i386 2.6.2-1 [107 kB] Get: 3 http://deb.debian.org/debian unstable/main i386 python3.11-minimal i386 3.11.9-1 [1918 kB] Get: 4 http://deb.debian.org/debian unstable/main i386 python3-minimal i386 3.11.8-1 [26.3 kB] Get: 5 http://deb.debian.org/debian unstable/main i386 media-types all 10.1.0 [26.9 kB] Get: 6 http://deb.debian.org/debian unstable/main i386 netbase all 6.4 [12.8 kB] Get: 7 http://deb.debian.org/debian unstable/main i386 tzdata all 2024a-3 [255 kB] Get: 8 http://deb.debian.org/debian unstable/main i386 readline-common all 8.2-4 [69.3 kB] Get: 9 http://deb.debian.org/debian unstable/main i386 libreadline8t64 i386 8.2-4 [171 kB] Get: 10 http://deb.debian.org/debian unstable/main i386 libpython3.11-stdlib i386 3.11.9-1 [1795 kB] Get: 11 http://deb.debian.org/debian unstable/main i386 python3.11 i386 3.11.9-1 [602 kB] Get: 12 http://deb.debian.org/debian unstable/main i386 libpython3-stdlib i386 3.11.8-1 [9336 B] Get: 13 http://deb.debian.org/debian unstable/main i386 python3 i386 3.11.8-1 [27.4 kB] Get: 14 http://deb.debian.org/debian unstable/main i386 libpython3.12-minimal i386 3.12.3-1 [809 kB] Get: 15 http://deb.debian.org/debian unstable/main i386 python3.12-minimal i386 3.12.3-1 [2224 kB] Get: 16 http://deb.debian.org/debian unstable/main i386 libproc2-0 i386 2:4.0.4-4 [65.4 kB] Get: 17 http://deb.debian.org/debian unstable/main i386 procps i386 2:4.0.4-4 [876 kB] Get: 18 http://deb.debian.org/debian unstable/main i386 sensible-utils all 0.0.22 [22.4 kB] Get: 19 http://deb.debian.org/debian unstable/main i386 libmagic-mgc i386 1:5.45-3 [314 kB] Get: 20 http://deb.debian.org/debian unstable/main i386 libmagic1t64 i386 1:5.45-3 [114 kB] Get: 21 http://deb.debian.org/debian unstable/main i386 file i386 1:5.45-3 [42.9 kB] Get: 22 http://deb.debian.org/debian unstable/main i386 gettext-base i386 0.21-14+b1 [162 kB] Get: 23 http://deb.debian.org/debian unstable/main i386 libuchardet0 i386 0.0.8-1+b1 [69.1 kB] Get: 24 http://deb.debian.org/debian unstable/main i386 groff-base i386 1.23.0-3+b1 [1195 kB] Get: 25 http://deb.debian.org/debian unstable/main i386 bsdextrautils i386 2.40-6 [96.7 kB] Get: 26 http://deb.debian.org/debian unstable/main i386 libpipeline1 i386 1.5.7-2 [39.7 kB] Get: 27 http://deb.debian.org/debian unstable/main i386 man-db i386 2.12.1-1 [1421 kB] Get: 28 http://deb.debian.org/debian unstable/main i386 m4 i386 1.4.19-4 [293 kB] Get: 29 http://deb.debian.org/debian unstable/main i386 autoconf all 2.71-3 [332 kB] Get: 30 http://deb.debian.org/debian unstable/main i386 autotools-dev all 20220109.1 [51.6 kB] Get: 31 http://deb.debian.org/debian unstable/main i386 automake all 1:1.16.5-1.3 [823 kB] Get: 32 http://deb.debian.org/debian unstable/main i386 autopoint all 0.21-14 [496 kB] Get: 33 http://deb.debian.org/debian unstable/main i386 cython3 i386 3.0.10+dfsg-5 [3548 kB] Get: 34 http://deb.debian.org/debian unstable/main i386 libdebhelper-perl all 13.15.3 [88.0 kB] Get: 35 http://deb.debian.org/debian unstable/main i386 libtool all 2.4.7-7 [517 kB] Get: 36 http://deb.debian.org/debian unstable/main i386 dh-autoreconf all 20 [17.1 kB] Get: 37 http://deb.debian.org/debian unstable/main i386 libarchive-zip-perl all 1.68-1 [104 kB] Get: 38 http://deb.debian.org/debian unstable/main i386 libsub-override-perl all 0.10-1 [10.6 kB] Get: 39 http://deb.debian.org/debian unstable/main i386 libfile-stripnondeterminism-perl all 1.13.1-1 [19.4 kB] Get: 40 http://deb.debian.org/debian unstable/main i386 dh-strip-nondeterminism all 1.13.1-1 [8620 B] Get: 41 http://deb.debian.org/debian unstable/main i386 libelf1t64 i386 0.191-1+b1 [194 kB] Get: 42 http://deb.debian.org/debian unstable/main i386 dwz i386 0.15-1+b1 [116 kB] Get: 43 http://deb.debian.org/debian unstable/main i386 libicu72 i386 72.1-4+b1 [9549 kB] Get: 44 http://deb.debian.org/debian unstable/main i386 libxml2 i386 2.9.14+dfsg-1.3+b2 [727 kB] Get: 45 http://deb.debian.org/debian unstable/main i386 gettext i386 0.21-14+b1 [1311 kB] Get: 46 http://deb.debian.org/debian unstable/main i386 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 47 http://deb.debian.org/debian unstable/main i386 po-debconf all 1.0.21+nmu1 [248 kB] Get: 48 http://deb.debian.org/debian unstable/main i386 debhelper all 13.15.3 [901 kB] Get: 49 http://deb.debian.org/debian unstable/main i386 python3-pkg-resources all 68.1.2-2 [241 kB] Get: 50 http://deb.debian.org/debian unstable/main i386 python3-lib2to3 all 3.12.3-1 [77.6 kB] Get: 51 http://deb.debian.org/debian unstable/main i386 python3-distutils all 3.12.3-1 [131 kB] Get: 52 http://deb.debian.org/debian unstable/main i386 python3-setuptools all 68.1.2-2 [468 kB] Get: 53 http://deb.debian.org/debian unstable/main i386 dh-python all 6.20240422 [107 kB] Get: 54 http://deb.debian.org/debian unstable/main i386 libblas3 i386 3.12.0-3 [140 kB] Get: 55 http://deb.debian.org/debian unstable/main i386 libexpat1-dev i386 2.6.2-1 [165 kB] Get: 56 http://deb.debian.org/debian unstable/main i386 libfftw3-double3 i386 3.3.10-1+b2 [624 kB] Get: 57 http://deb.debian.org/debian unstable/main i386 libfftw3-long3 i386 3.3.10-1+b2 [339 kB] Get: 58 http://deb.debian.org/debian unstable/main i386 libfftw3-quad3 i386 3.3.10-1+b2 [1807 kB] Get: 59 http://deb.debian.org/debian unstable/main i386 libfftw3-single3 i386 3.3.10-1+b2 [645 kB] Get: 60 http://deb.debian.org/debian unstable/main i386 libfftw3-bin i386 3.3.10-1+b2 [50.8 kB] Get: 61 http://deb.debian.org/debian unstable/main i386 libfftw3-dev i386 3.3.10-1+b2 [3207 kB] Get: 62 http://deb.debian.org/debian unstable/main i386 libgfortran5 i386 14-20240330-1 [735 kB] Get: 63 http://deb.debian.org/debian unstable/main i386 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [326 kB] Get: 64 http://deb.debian.org/debian unstable/main i386 libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [116 kB] Get: 65 http://deb.debian.org/debian unstable/main i386 libjs-sphinxdoc all 7.2.6-6 [150 kB] Get: 66 http://deb.debian.org/debian unstable/main i386 liblapack3 i386 3.12.0-3 [2167 kB] Get: 67 http://deb.debian.org/debian unstable/main i386 liblbfgsb0 i386 3.0+dfsg.4-1+b1 [29.1 kB] Get: 68 http://deb.debian.org/debian unstable/main i386 libpython3.11t64 i386 3.11.9-1 [1982 kB] Get: 69 http://deb.debian.org/debian unstable/main i386 zlib1g-dev i386 1:1.3.dfsg-3.1 [915 kB] Get: 70 http://deb.debian.org/debian unstable/main i386 libpython3.11-dev i386 3.11.9-1 [4632 kB] Get: 71 http://deb.debian.org/debian unstable/main i386 libpython3-dev i386 3.11.8-1 [9600 B] Get: 72 http://deb.debian.org/debian unstable/main i386 libpython3.12-stdlib i386 3.12.3-1 [1945 kB] Get: 73 http://deb.debian.org/debian unstable/main i386 libpython3.12t64 i386 3.12.3-1 [2141 kB] Get: 74 http://deb.debian.org/debian unstable/main i386 libpython3.12-dev i386 3.12.3-1 [5240 kB] Get: 75 http://deb.debian.org/debian unstable/main i386 libpython3-all-dev i386 3.11.8-1 [1068 B] Get: 76 http://deb.debian.org/debian unstable/main i386 python3-packaging all 24.0-1 [45.5 kB] Get: 77 http://deb.debian.org/debian unstable/main i386 python3-pyproject-hooks all 1.0.0-2 [10.6 kB] Get: 78 http://deb.debian.org/debian unstable/main i386 python3-toml all 0.10.2-1 [16.2 kB] Get: 79 http://deb.debian.org/debian unstable/main i386 python3-wheel all 0.43.0-1 [52.5 kB] Get: 80 http://deb.debian.org/debian unstable/main i386 python3-build all 1.1.1-1 [32.5 kB] Get: 81 http://deb.debian.org/debian unstable/main i386 python3-installer all 0.7.0+dfsg1-3 [18.6 kB] Get: 82 http://deb.debian.org/debian unstable/main i386 pybuild-plugin-pyproject all 6.20240422 [11.1 kB] Get: 83 http://deb.debian.org/debian unstable/main i386 python3.12 i386 3.12.3-1 [659 kB] Get: 84 http://deb.debian.org/debian unstable/main i386 python3-all i386 3.11.8-1 [1056 B] Get: 85 http://deb.debian.org/debian unstable/main i386 python3.11-dev i386 3.11.9-1 [501 kB] Get: 86 http://deb.debian.org/debian unstable/main i386 python3-dev i386 3.11.8-1 [26.1 kB] Get: 87 http://deb.debian.org/debian unstable/main i386 python3.12-dev i386 3.12.3-1 [499 kB] Get: 88 http://deb.debian.org/debian unstable/main i386 python3-all-dev i386 3.11.8-1 [1072 B] Get: 89 http://deb.debian.org/debian unstable/main i386 python3-decorator all 5.1.1-5 [15.1 kB] Get: 90 http://deb.debian.org/debian unstable/main i386 python3-iniconfig all 1.1.1-2 [6396 B] Get: 91 http://deb.debian.org/debian unstable/main i386 python3-joblib all 1.3.2-2 [218 kB] Get: 92 http://deb.debian.org/debian unstable/main i386 python3-numpy i386 1:1.26.4+ds-6 [5465 kB] Get: 93 http://deb.debian.org/debian unstable/main i386 python3-pluggy all 1.4.0-1 [26.2 kB] Get: 94 http://deb.debian.org/debian unstable/main i386 python3-pytest all 8.1.1-1 [245 kB] Get: 95 http://deb.debian.org/debian unstable/main i386 python3-pytest-runner all 2.11.1-4 [8432 B] Get: 96 http://deb.debian.org/debian unstable/main i386 python3-scipy i386 1.11.4-6 [19.0 MB] Get: 97 http://deb.debian.org/debian unstable/main i386 python3-threadpoolctl all 3.1.0-1 [21.2 kB] Get: 98 http://deb.debian.org/debian unstable/main i386 python3-sklearn-lib i386 1.4.2+dfsg-1 [6126 kB] Get: 99 http://deb.debian.org/debian unstable/main i386 python3-sklearn all 1.4.2+dfsg-1 [2247 kB] Fetched 96.3 MB in 3s (31.3 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libpython3.11-minimal:i386. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19681 files and directories currently installed.) Preparing to unpack .../libpython3.11-minimal_3.11.9-1_i386.deb ... Unpacking libpython3.11-minimal:i386 (3.11.9-1) ... Selecting previously unselected package libexpat1:i386. Preparing to unpack .../libexpat1_2.6.2-1_i386.deb ... Unpacking libexpat1:i386 (2.6.2-1) ... Selecting previously unselected package python3.11-minimal. 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Unpacking python3-minimal (3.11.8-1) ... Selecting previously unselected package media-types. Preparing to unpack .../1-media-types_10.1.0_all.deb ... Unpacking media-types (10.1.0) ... Selecting previously unselected package netbase. Preparing to unpack .../2-netbase_6.4_all.deb ... Unpacking netbase (6.4) ... Selecting previously unselected package tzdata. Preparing to unpack .../3-tzdata_2024a-3_all.deb ... Unpacking tzdata (2024a-3) ... Selecting previously unselected package readline-common. Preparing to unpack .../4-readline-common_8.2-4_all.deb ... Unpacking readline-common (8.2-4) ... Selecting previously unselected package libreadline8t64:i386. Preparing to unpack .../5-libreadline8t64_8.2-4_i386.deb ... Adding 'diversion of /lib/i386-linux-gnu/libhistory.so.8 to /lib/i386-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/i386-linux-gnu/libhistory.so.8.2 to /lib/i386-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/i386-linux-gnu/libreadline.so.8 to /lib/i386-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/i386-linux-gnu/libreadline.so.8.2 to /lib/i386-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' Unpacking libreadline8t64:i386 (8.2-4) ... Selecting previously unselected package libpython3.11-stdlib:i386. Preparing to unpack .../6-libpython3.11-stdlib_3.11.9-1_i386.deb ... Unpacking libpython3.11-stdlib:i386 (3.11.9-1) ... Selecting previously unselected package python3.11. Preparing to unpack .../7-python3.11_3.11.9-1_i386.deb ... Unpacking python3.11 (3.11.9-1) ... Selecting previously unselected package libpython3-stdlib:i386. Preparing to unpack .../8-libpython3-stdlib_3.11.8-1_i386.deb ... Unpacking libpython3-stdlib:i386 (3.11.8-1) ... Setting up python3-minimal (3.11.8-1) ... Selecting previously unselected package python3. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20989 files and directories currently installed.) Preparing to unpack .../00-python3_3.11.8-1_i386.deb ... Unpacking python3 (3.11.8-1) ... Selecting previously unselected package libpython3.12-minimal:i386. 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Unpacking libpython3.11t64:i386 (3.11.9-1) ... Selecting previously unselected package zlib1g-dev:i386. Preparing to unpack .../56-zlib1g-dev_1%3a1.3.dfsg-3.1_i386.deb ... Unpacking zlib1g-dev:i386 (1:1.3.dfsg-3.1) ... Selecting previously unselected package libpython3.11-dev:i386. Preparing to unpack .../57-libpython3.11-dev_3.11.9-1_i386.deb ... Unpacking libpython3.11-dev:i386 (3.11.9-1) ... Selecting previously unselected package libpython3-dev:i386. Preparing to unpack .../58-libpython3-dev_3.11.8-1_i386.deb ... Unpacking libpython3-dev:i386 (3.11.8-1) ... Selecting previously unselected package libpython3.12-stdlib:i386. Preparing to unpack .../59-libpython3.12-stdlib_3.12.3-1_i386.deb ... Unpacking libpython3.12-stdlib:i386 (3.12.3-1) ... Selecting previously unselected package libpython3.12t64:i386. Preparing to unpack .../60-libpython3.12t64_3.12.3-1_i386.deb ... Unpacking libpython3.12t64:i386 (3.12.3-1) ... Selecting previously unselected package libpython3.12-dev:i386. 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Selecting previously unselected package python3-dev. Preparing to unpack .../73-python3-dev_3.11.8-1_i386.deb ... Unpacking python3-dev (3.11.8-1) ... Selecting previously unselected package python3.12-dev. Preparing to unpack .../74-python3.12-dev_3.12.3-1_i386.deb ... Unpacking python3.12-dev (3.12.3-1) ... Selecting previously unselected package python3-all-dev. Preparing to unpack .../75-python3-all-dev_3.11.8-1_i386.deb ... Unpacking python3-all-dev (3.11.8-1) ... Selecting previously unselected package python3-decorator. Preparing to unpack .../76-python3-decorator_5.1.1-5_all.deb ... Unpacking python3-decorator (5.1.1-5) ... Selecting previously unselected package python3-iniconfig. Preparing to unpack .../77-python3-iniconfig_1.1.1-2_all.deb ... Unpacking python3-iniconfig (1.1.1-2) ... Selecting previously unselected package python3-joblib. Preparing to unpack .../78-python3-joblib_1.3.2-2_all.deb ... Unpacking python3-joblib (1.3.2-2) ... 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Selecting previously unselected package python3-sklearn-lib:i386. Preparing to unpack .../85-python3-sklearn-lib_1.4.2+dfsg-1_i386.deb ... Unpacking python3-sklearn-lib:i386 (1.4.2+dfsg-1) ... Selecting previously unselected package python3-sklearn. Preparing to unpack .../86-python3-sklearn_1.4.2+dfsg-1_all.deb ... Unpacking python3-sklearn (1.4.2+dfsg-1) ... Setting up media-types (10.1.0) ... Setting up libpipeline1:i386 (1.5.7-2) ... Setting up libfftw3-single3:i386 (3.3.10-1+b2) ... Setting up libicu72:i386 (72.1-4+b1) ... Setting up bsdextrautils (2.40-6) ... Setting up libmagic-mgc (1:5.45-3) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libdebhelper-perl (13.15.3) ... Setting up libmagic1t64:i386 (1:5.45-3) ... Setting up libpython3.12-minimal:i386 (3.12.3-1) ... Setting up libfftw3-long3:i386 (3.3.10-1+b2) ... Setting up gettext-base (0.21-14+b1) ... Setting up m4 (1.4.19-4) ... Setting up file (1:5.45-3) ... Setting up libelf1t64:i386 (0.191-1+b1) ... Setting up tzdata (2024a-3) ... Current default time zone: 'Etc/UTC' Local time is now: Tue Apr 23 09:16:20 UTC 2024. Universal Time is now: Tue Apr 23 09:16:20 UTC 2024. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up autotools-dev (20220109.1) ... Setting up libblas3:i386 (3.12.0-3) ... update-alternatives: using /usr/lib/i386-linux-gnu/blas/libblas.so.3 to provide /usr/lib/i386-linux-gnu/libblas.so.3 (libblas.so.3-i386-linux-gnu) in auto mode Setting up libexpat1-dev:i386 (2.6.2-1) ... Setting up libfftw3-quad3:i386 (3.3.10-1+b2) ... Setting up libproc2-0:i386 (2:4.0.4-4) ... Setting up autopoint (0.21-14) ... Setting up libfftw3-double3:i386 (3.3.10-1+b2) ... Setting up libgfortran5:i386 (14-20240330-1) ... Setting up autoconf (2.71-3) ... Setting up zlib1g-dev:i386 (1:1.3.dfsg-3.1) ... Setting up dwz (0.15-1+b1) ... Setting up sensible-utils (0.0.22) ... Setting up libuchardet0:i386 (0.0.8-1+b1) ... Setting up procps (2:4.0.4-4) ... Setting up libsub-override-perl (0.10-1) ... Setting up netbase (6.4) ... Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... Setting up readline-common (8.2-4) ... Setting up libxml2:i386 (2.9.14+dfsg-1.3+b2) ... Setting up libjs-underscore (1.13.4~dfsg+~1.11.4-3) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.13.1-1) ... Setting up python3.12-minimal (3.12.3-1) ... Setting up liblapack3:i386 (3.12.0-3) ... update-alternatives: using /usr/lib/i386-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/i386-linux-gnu/liblapack.so.3 (liblapack.so.3-i386-linux-gnu) in auto mode Setting up gettext (0.21-14+b1) ... Setting up libtool (2.4.7-7) ... Setting up libfftw3-bin (3.3.10-1+b2) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up libjs-sphinxdoc (7.2.6-6) ... Setting up libreadline8t64:i386 (8.2-4) ... Setting up dh-strip-nondeterminism (1.13.1-1) ... Setting up groff-base (1.23.0-3+b1) ... Setting up libfftw3-dev:i386 (3.3.10-1+b2) ... Setting up liblbfgsb0:i386 (3.0+dfsg.4-1+b1) ... Setting up libpython3.12-stdlib:i386 (3.12.3-1) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libpython3.11-stdlib:i386 (3.11.9-1) ... Setting up python3.12 (3.12.3-1) ... Setting up libpython3.11t64:i386 (3.11.9-1) ... Setting up man-db (2.12.1-1) ... Not building database; man-db/auto-update is not 'true'. Setting up libpython3.12t64:i386 (3.12.3-1) ... Setting up libpython3.11-dev:i386 (3.11.9-1) ... Setting up libpython3-stdlib:i386 (3.11.8-1) ... Setting up python3.11 (3.11.9-1) ... Setting up libpython3-dev:i386 (3.11.8-1) ... Setting up python3.11-dev (3.11.9-1) ... Setting up debhelper (13.15.3) ... Setting up python3 (3.11.8-1) ... Setting up libpython3.12-dev:i386 (3.12.3-1) ... Setting up python3-wheel (0.43.0-1) ... Setting up python3-decorator (5.1.1-5) ... Setting up python3-packaging (24.0-1) ... Setting up python3-pyproject-hooks (1.0.0-2) ... Setting up libpython3-all-dev:i386 (3.11.8-1) ... Setting up python3.12-dev (3.12.3-1) ... Setting up cython3 (3.0.10+dfsg-5) ... Setting up python3-toml (0.10.2-1) ... Setting up python3-installer (0.7.0+dfsg1-3) ... Setting up python3-pluggy (1.4.0-1) ... Setting up python3-build (1.1.1-1) ... Setting up python3-lib2to3 (3.12.3-1) ... Setting up python3-pkg-resources (68.1.2-2) ... Setting up python3-distutils (3.12.3-1) ... python3.12: can't get files for byte-compilation Setting up python3-iniconfig (1.1.1-2) ... Setting up python3-setuptools (68.1.2-2) ... Setting up python3-joblib (1.3.2-2) ... Setting up python3-pytest (8.1.1-1) ... Setting up python3-threadpoolctl (3.1.0-1) ... Setting up python3-all (3.11.8-1) ... Setting up python3-dev (3.11.8-1) ... Setting up python3-numpy (1:1.26.4+ds-6) ... Setting up python3-pytest-runner (2.11.1-4) ... Setting up dh-python (6.20240422) ... Setting up python3-all-dev (3.11.8-1) ... Setting up python3-scipy (1.11.4-6) ... Setting up pybuild-plugin-pyproject (6.20240422) ... Setting up python3-sklearn-lib:i386 (1.4.2+dfsg-1) ... Setting up python3-sklearn (1.4.2+dfsg-1) ... Processing triggers for libc-bin (2.37-18) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps Reading package lists... Building dependency tree... Reading state information... fakeroot is already the newest version (1.34-1). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: Building the package I: Running cd /build/reproducible-path/opentsne-1.0.0/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../opentsne_1.0.0-1_source.changes dpkg-buildpackage: info: source package opentsne dpkg-buildpackage: info: source version 1.0.0-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Picca Frédéric-Emmanuel dpkg-source --before-build . dpkg-buildpackage: info: host architecture i386 fakeroot debian/rules clean dh clean --buildsystem=pybuild dh_auto_clean -O--buildsystem=pybuild dh_autoreconf_clean -O--buildsystem=pybuild dh_clean -O--buildsystem=pybuild debian/rules execute_after_dh_clean make[1]: Entering directory '/build/reproducible-path/opentsne-1.0.0' # remove the cython generated file to force rebuild rm -f openTSNE/_tsne.cpp openTSNE/kl_divergence.cpp openTSNE/quad_tree.cpp openTSNE/_matrix_mul/matrix_mul_fftw3.cpp openTSNE/_matrix_mul/matrix_mul_numpy.cpp make[1]: Leaving directory '/build/reproducible-path/opentsne-1.0.0' debian/rules build dh build --buildsystem=pybuild dh_update_autotools_config -O--buildsystem=pybuild dh_autoreconf -O--buildsystem=pybuild dh_auto_configure -O--buildsystem=pybuild dh_auto_build -O--buildsystem=pybuild I: pybuild plugin_pyproject:129: Building wheel for python3.12 with "build" module I: pybuild base:311: python3.12 -m build --skip-dependency-check --no-isolation --wheel --outdir /build/reproducible-path/opentsne-1.0.0/.pybuild/cpython3_3.12_opentsne * Building wheel... FFTW3 header files found. Using FFTW implementation of FFT. running bdist_wheel running build running build_py creating build/lib.linux-i686-cpython-312 creating build/lib.linux-i686-cpython-312/openTSNE copying openTSNE/tsne.py -> build/lib.linux-i686-cpython-312/openTSNE copying openTSNE/affinity.py -> build/lib.linux-i686-cpython-312/openTSNE copying openTSNE/initialization.py -> build/lib.linux-i686-cpython-312/openTSNE copying openTSNE/version.py -> build/lib.linux-i686-cpython-312/openTSNE copying openTSNE/__init__.py -> build/lib.linux-i686-cpython-312/openTSNE copying openTSNE/metrics.py -> build/lib.linux-i686-cpython-312/openTSNE copying openTSNE/utils.py -> build/lib.linux-i686-cpython-312/openTSNE copying openTSNE/callbacks.py -> build/lib.linux-i686-cpython-312/openTSNE copying openTSNE/nearest_neighbors.py -> build/lib.linux-i686-cpython-312/openTSNE copying openTSNE/sklearn.py -> build/lib.linux-i686-cpython-312/openTSNE creating build/lib.linux-i686-cpython-312/openTSNE/_matrix_mul copying openTSNE/_matrix_mul/__init__.py -> build/lib.linux-i686-cpython-312/openTSNE/_matrix_mul creating build/lib.linux-i686-cpython-312/openTSNE/dependencies copying openTSNE/dependencies/__init__.py -> build/lib.linux-i686-cpython-312/openTSNE/dependencies creating build/lib.linux-i686-cpython-312/openTSNE/dependencies/annoy copying openTSNE/dependencies/annoy/__init__.py -> build/lib.linux-i686-cpython-312/openTSNE/dependencies/annoy running build_ext creating build/reproducible-path/opentsne-1.0.0/tmp0c856zjn i686-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/opentsne-1.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include -I/usr/Library/include -c /build/reproducible-path/opentsne-1.0.0/tmp0c856zjn/omp.c -o build/reproducible-path/opentsne-1.0.0/tmp0c856zjn/omp.o Found openmp. Compiling with openmp flags... Traceback (most recent call last): File "/usr/lib/python3/dist-packages/pyproject_hooks/_in_process/_in_process.py", line 353, in main() File "/usr/lib/python3/dist-packages/pyproject_hooks/_in_process/_in_process.py", line 335, in main json_out['return_val'] = hook(**hook_input['kwargs']) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/usr/lib/python3/dist-packages/pyproject_hooks/_in_process/_in_process.py", line 251, in build_wheel return _build_backend().build_wheel(wheel_directory, config_settings, ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/usr/lib/python3/dist-packages/setuptools/build_meta.py", line 434, in build_wheel return self._build_with_temp_dir( ^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/usr/lib/python3/dist-packages/setuptools/build_meta.py", line 419, in _build_with_temp_dir self.run_setup() File "/usr/lib/python3/dist-packages/setuptools/build_meta.py", line 341, in run_setup exec(code, locals()) File "", line 268, in File "/usr/lib/python3/dist-packages/setuptools/__init__.py", line 107, in setup return distutils.core.setup(**attrs) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/usr/lib/python3/dist-packages/setuptools/_distutils/core.py", line 185, in setup return run_commands(dist) ^^^^^^^^^^^^^^^^^^ File "/usr/lib/python3/dist-packages/setuptools/_distutils/core.py", line 201, in run_commands dist.run_commands() File "/usr/lib/python3/dist-packages/setuptools/_distutils/dist.py", line 969, in run_commands self.run_command(cmd) File "/usr/lib/python3/dist-packages/setuptools/dist.py", line 1233, in run_command super().run_command(command) File "/usr/lib/python3/dist-packages/setuptools/_distutils/dist.py", line 988, in run_command cmd_obj.run() File "/usr/lib/python3/dist-packages/wheel/bdist_wheel.py", line 368, in run self.run_command("build") File "/usr/lib/python3/dist-packages/setuptools/_distutils/cmd.py", line 318, in run_command self.distribution.run_command(command) File "/usr/lib/python3/dist-packages/setuptools/dist.py", line 1233, in run_command super().run_command(command) File "/usr/lib/python3/dist-packages/setuptools/_distutils/dist.py", line 988, in run_command cmd_obj.run() File "/usr/lib/python3/dist-packages/setuptools/_distutils/command/build.py", line 131, in run self.run_command(cmd_name) File "/usr/lib/python3/dist-packages/setuptools/_distutils/cmd.py", line 318, in run_command self.distribution.run_command(command) File "/usr/lib/python3/dist-packages/setuptools/dist.py", line 1233, in run_command super().run_command(command) File "/usr/lib/python3/dist-packages/setuptools/_distutils/dist.py", line 988, in run_command cmd_obj.run() File "/usr/lib/python3/dist-packages/setuptools/_distutils/command/build_ext.py", line 345, in run self.build_extensions() File "", line 211, in build_extensions File "/usr/lib/python3/dist-packages/setuptools/_distutils/command/build_ext.py", line 467, in build_extensions self._build_extensions_serial() File "/usr/lib/python3/dist-packages/setuptools/_distutils/command/build_ext.py", line 493, in _build_extensions_serial self.build_extension(ext) File "/usr/lib/python3/dist-packages/Cython/Distutils/build_ext.py", line 130, in build_extension new_ext = cythonize( ^^^^^^^^^^ File "/usr/lib/python3/dist-packages/Cython/Build/Dependencies.py", line 1010, in cythonize module_list, module_metadata = create_extension_list( ^^^^^^^^^^^^^^^^^^^^^^ File "/usr/lib/python3/dist-packages/Cython/Build/Dependencies.py", line 859, in create_extension_list kwds = deps.distutils_info(file, aliases, base).values ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/usr/lib/python3/dist-packages/Cython/Build/Dependencies.py", line 707, in distutils_info return (self.transitive_merge(filename, self.distutils_info0, DistutilsInfo.merge) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/usr/lib/python3/dist-packages/Cython/Build/Dependencies.py", line 716, in transitive_merge return self.transitive_merge_helper( ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/usr/lib/python3/dist-packages/Cython/Build/Dependencies.py", line 728, in transitive_merge_helper for next in outgoing(node): ^^^^^^^^^^^^^^ File "Cython/Utils.py", line 129, in Cython.Utils.cached_method.wrapper File "/usr/lib/python3/dist-packages/Cython/Build/Dependencies.py", line 629, in cimported_files pxd_file = self.find_pxd(module, filename) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "Cython/Utils.py", line 129, in Cython.Utils.cached_method.wrapper File "/usr/lib/python3/dist-packages/Cython/Build/Dependencies.py", line 610, in find_pxd pxd = self.context.find_pxd_file(relative, source_file_path=filename) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/usr/lib/python3/dist-packages/Cython/Compiler/Main.py", line 281, in find_pxd_file pxd = self.search_include_directories( ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/usr/lib/python3/dist-packages/Cython/Compiler/Main.py", line 309, in search_include_directories return search_include_directories( ^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "Cython/Utils.py", line 90, in Cython.Utils.cached_function.wrapper File "/usr/lib/python3/dist-packages/Cython/Compiler/Main.py", line 703, in search_include_directories path = os.path.join(dirname, dotted_filename) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "", line 76, in join TypeError: expected str, bytes or os.PathLike object, not get_numpy_include ERROR Backend subprocess exited when trying to invoke build_wheel E: pybuild pybuild:389: build: plugin pyproject failed with: exit code=1: python3.12 -m build --skip-dependency-check --no-isolation --wheel --outdir /build/reproducible-path/opentsne-1.0.0/.pybuild/cpython3_3.12_opentsne I: pybuild plugin_pyproject:129: Building wheel for python3.11 with "build" module I: pybuild base:311: python3.11 -m build --skip-dependency-check --no-isolation --wheel --outdir /build/reproducible-path/opentsne-1.0.0/.pybuild/cpython3_3.11_opentsne * Building wheel... FFTW3 header files found. Using FFTW implementation of FFT. running bdist_wheel running build running build_py creating build/lib.linux-i686-cpython-311 creating build/lib.linux-i686-cpython-311/openTSNE copying openTSNE/tsne.py -> build/lib.linux-i686-cpython-311/openTSNE copying openTSNE/affinity.py -> build/lib.linux-i686-cpython-311/openTSNE copying openTSNE/initialization.py -> build/lib.linux-i686-cpython-311/openTSNE copying openTSNE/version.py -> build/lib.linux-i686-cpython-311/openTSNE copying openTSNE/__init__.py -> build/lib.linux-i686-cpython-311/openTSNE copying openTSNE/metrics.py -> build/lib.linux-i686-cpython-311/openTSNE copying openTSNE/utils.py -> build/lib.linux-i686-cpython-311/openTSNE copying openTSNE/callbacks.py -> build/lib.linux-i686-cpython-311/openTSNE copying openTSNE/nearest_neighbors.py -> build/lib.linux-i686-cpython-311/openTSNE copying openTSNE/sklearn.py -> build/lib.linux-i686-cpython-311/openTSNE creating build/lib.linux-i686-cpython-311/openTSNE/_matrix_mul copying openTSNE/_matrix_mul/__init__.py -> build/lib.linux-i686-cpython-311/openTSNE/_matrix_mul creating build/lib.linux-i686-cpython-311/openTSNE/dependencies copying openTSNE/dependencies/__init__.py -> build/lib.linux-i686-cpython-311/openTSNE/dependencies creating build/lib.linux-i686-cpython-311/openTSNE/dependencies/annoy copying openTSNE/dependencies/annoy/__init__.py -> build/lib.linux-i686-cpython-311/openTSNE/dependencies/annoy running build_ext i686-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -Werror=implicit-function-declaration -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/opentsne-1.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include -I/usr/Library/include -c ./tmpav5awxav/omp.c -o ./tmpav5awxav/omp.o Found openmp. Compiling with openmp flags... Traceback (most recent call last): File "/usr/lib/python3/dist-packages/pyproject_hooks/_in_process/_in_process.py", line 353, in main() File "/usr/lib/python3/dist-packages/pyproject_hooks/_in_process/_in_process.py", line 335, in main json_out['return_val'] = hook(**hook_input['kwargs']) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/usr/lib/python3/dist-packages/pyproject_hooks/_in_process/_in_process.py", line 251, in build_wheel return _build_backend().build_wheel(wheel_directory, config_settings, ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/usr/lib/python3/dist-packages/setuptools/build_meta.py", line 434, in build_wheel return self._build_with_temp_dir( ^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/usr/lib/python3/dist-packages/setuptools/build_meta.py", line 419, in _build_with_temp_dir self.run_setup() File "/usr/lib/python3/dist-packages/setuptools/build_meta.py", line 341, in run_setup exec(code, locals()) File "", line 268, in File "/usr/lib/python3/dist-packages/setuptools/__init__.py", line 107, in setup return distutils.core.setup(**attrs) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/usr/lib/python3/dist-packages/setuptools/_distutils/core.py", line 185, in setup return run_commands(dist) ^^^^^^^^^^^^^^^^^^ File "/usr/lib/python3/dist-packages/setuptools/_distutils/core.py", line 201, in run_commands dist.run_commands() File "/usr/lib/python3/dist-packages/setuptools/_distutils/dist.py", line 969, in run_commands self.run_command(cmd) File "/usr/lib/python3/dist-packages/setuptools/dist.py", line 1233, in run_command super().run_command(command) File "/usr/lib/python3/dist-packages/setuptools/_distutils/dist.py", line 988, in run_command cmd_obj.run() File "/usr/lib/python3/dist-packages/wheel/bdist_wheel.py", line 368, in run self.run_command("build") File "/usr/lib/python3/dist-packages/setuptools/_distutils/cmd.py", line 318, in run_command self.distribution.run_command(command) File "/usr/lib/python3/dist-packages/setuptools/dist.py", line 1233, in run_command super().run_command(command) File "/usr/lib/python3/dist-packages/setuptools/_distutils/dist.py", line 988, in run_command cmd_obj.run() File "/usr/lib/python3/dist-packages/setuptools/_distutils/command/build.py", line 131, in run self.run_command(cmd_name) File "/usr/lib/python3/dist-packages/setuptools/_distutils/cmd.py", line 318, in run_command self.distribution.run_command(command) File "/usr/lib/python3/dist-packages/setuptools/dist.py", line 1233, in run_command super().run_command(command) File "/usr/lib/python3/dist-packages/setuptools/_distutils/dist.py", line 988, in run_command cmd_obj.run() File "/usr/lib/python3/dist-packages/setuptools/_distutils/command/build_ext.py", line 345, in run self.build_extensions() File "", line 211, in build_extensions File "/usr/lib/python3/dist-packages/setuptools/_distutils/command/build_ext.py", line 467, in build_extensions self._build_extensions_serial() File "/usr/lib/python3/dist-packages/setuptools/_distutils/command/build_ext.py", line 493, in _build_extensions_serial self.build_extension(ext) File "/usr/lib/python3/dist-packages/Cython/Distutils/build_ext.py", line 130, in build_extension new_ext = cythonize( ^^^^^^^^^^ File "/usr/lib/python3/dist-packages/Cython/Build/Dependencies.py", line 1010, in cythonize module_list, module_metadata = create_extension_list( ^^^^^^^^^^^^^^^^^^^^^^ File "/usr/lib/python3/dist-packages/Cython/Build/Dependencies.py", line 859, in create_extension_list kwds = deps.distutils_info(file, aliases, base).values ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/usr/lib/python3/dist-packages/Cython/Build/Dependencies.py", line 707, in distutils_info return (self.transitive_merge(filename, self.distutils_info0, DistutilsInfo.merge) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/usr/lib/python3/dist-packages/Cython/Build/Dependencies.py", line 716, in transitive_merge return self.transitive_merge_helper( ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/usr/lib/python3/dist-packages/Cython/Build/Dependencies.py", line 728, in transitive_merge_helper for next in outgoing(node): ^^^^^^^^^^^^^^ File "Cython/Utils.py", line 129, in Cython.Utils.cached_method.wrapper File "/usr/lib/python3/dist-packages/Cython/Build/Dependencies.py", line 629, in cimported_files pxd_file = self.find_pxd(module, filename) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "Cython/Utils.py", line 129, in Cython.Utils.cached_method.wrapper File "/usr/lib/python3/dist-packages/Cython/Build/Dependencies.py", line 610, in find_pxd pxd = self.context.find_pxd_file(relative, source_file_path=filename) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/usr/lib/python3/dist-packages/Cython/Compiler/Main.py", line 281, in find_pxd_file pxd = self.search_include_directories( ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/usr/lib/python3/dist-packages/Cython/Compiler/Main.py", line 309, in search_include_directories return search_include_directories( ^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "Cython/Utils.py", line 90, in Cython.Utils.cached_function.wrapper File "/usr/lib/python3/dist-packages/Cython/Compiler/Main.py", line 703, in search_include_directories path = os.path.join(dirname, dotted_filename) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "", line 76, in join TypeError: expected str, bytes or os.PathLike object, not get_numpy_include ERROR Backend subprocess exited when trying to invoke build_wheel E: pybuild pybuild:389: build: plugin pyproject failed with: exit code=1: python3.11 -m build --skip-dependency-check --no-isolation --wheel --outdir /build/reproducible-path/opentsne-1.0.0/.pybuild/cpython3_3.11_opentsne dh_auto_build: error: pybuild --build -i python{version} -p "3.12 3.11" returned exit code 13 make: *** [debian/rules:16: build] Error 25 dpkg-buildpackage: error: debian/rules build subprocess returned exit status 2 I: copying local configuration E: Failed autobuilding of package I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/15179 and its subdirectories Tue Apr 23 09:17:51 UTC 2024 W: No second build log, what happened?