Sat Jun 1 05:40:33 UTC 2024 I: starting to build scythe/unstable/amd64 on jenkins on '2024-06-01 05:40' Sat Jun 1 05:40:33 UTC 2024 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/amd64_16/22491/console.log Sat Jun 1 05:40:33 UTC 2024 I: Downloading source for unstable/scythe=0.994+git20141017.20d3cff-4 --2024-06-01 05:40:33-- http://deb.debian.org/debian/pool/main/s/scythe/scythe_0.994%2bgit20141017.20d3cff-4.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2254 (2.2K) [text/prs.lines.tag] Saving to: ‘scythe_0.994+git20141017.20d3cff-4.dsc’ 0K .. 100% 290M=0s 2024-06-01 05:40:33 (290 MB/s) - ‘scythe_0.994+git20141017.20d3cff-4.dsc’ saved [2254/2254] Sat Jun 1 05:40:33 UTC 2024 I: scythe_0.994+git20141017.20d3cff-4.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: scythe Binary: scythe Architecture: any Version: 0.994+git20141017.20d3cff-4 Maintainer: Debian Med Packaging Team Uploaders: Kevin Murray Homepage: https://github.com/vsbuffalo/scythe Standards-Version: 4.7.0 Vcs-Browser: https://salsa.debian.org/med-team/scythe Vcs-Git: https://salsa.debian.org/med-team/scythe.git Testsuite: autopkgtest Build-Depends: debhelper-compat (= 13), zlib1g-dev, markdown , check Package-List: scythe deb science optional arch=any Checksums-Sha1: cd4c9135e947cfff0f9290be34ee516c77fabd1a 327436 scythe_0.994+git20141017.20d3cff.orig.tar.xz 3ed836467167ed4a4844bbed63e1dab0d654d172 6556 scythe_0.994+git20141017.20d3cff-4.debian.tar.xz Checksums-Sha256: 7af94d252296eedc9b4d6bea9133f11b25329001530f13b1cf7b517104f5e9d2 327436 scythe_0.994+git20141017.20d3cff.orig.tar.xz b9af2d19fb3d968e6c71daedca6b446f15cb31c3183c4c70caf17f764dc26402 6556 scythe_0.994+git20141017.20d3cff-4.debian.tar.xz Files: da02cf814fe5e4b589d33de5a243d53c 327436 scythe_0.994+git20141017.20d3cff.orig.tar.xz f71ba3be126d7006d7a5f766278c9b43 6556 scythe_0.994+git20141017.20d3cff-4.debian.tar.xz Dgit: 9c93e21906ae47f0204efbf85f7e7f93ce926131 debian archive/debian/0.994+git20141017.20d3cff-4 https://git.dgit.debian.org/scythe -----BEGIN PGP SIGNATURE----- iQJIBAEBCgAyFiEEj5GyJ8fW8rGUjII2eTz2fo8NEdoFAmZBCT8UHGVtb2xsaWVy QGRlYmlhbi5vcmcACgkQeTz2fo8NEdqNBhAAwa55ssYTeEeARxHFjF+HVDY2Z8As UlunSk+ji1gyJuCYB9nnAgEeo0Ed34tYwgIdkWevsAhi2Aq88KQr3NbIQuzPQ7nl oebzEiwM7OPa+ISRrTZ/UO3KCXcBzRQXaAP75B05OOKcN7LZLad4PNoABHetVixB Bv+/s2P6CrqzvKjrgITgVgawBCW0/d326IpoFvirEAjJaIYFepY2X6RX/SrNw8rf Yp6pGno7wrkMrfcc4oORdCKmI82yJAIhDf6f9Kq0zu565E8uSr1ZLyL0YQVtSm9w MZXXnHoUPgXb3fTGF/rKyLuK51wb4grKjIV2hV73sEZkvkSwGvSpysirA4n81C2e kbFa+WyKJhquE5OK5bAKHhG6SX9+Ik0KmmDzJyK+TAIW7iKD0tlQpuDH/065v3Mq z1/1I6YDXAIBAVsSZD6TCSUbL3uGwTrMBMk3Pv+x+DMTBcrqGxCi/ZPNGdtKzqHf 8VomDL1FLH9IpokrSLxDQLbY2oHtpfxUQc2oQasVvF8QEmMpN5Sp6PJkeGpcpIES NUGxE1GQ2OeNc0wj1d0Y3dVgULaHZ/PIeZDtjTWdsKaDL/yyredSuGJ8wHqR9/Ew vUlLJST8V+f6u+I0MUYxrwDdJarzX18N0O+LnCOShghUdIl+TYVVeMjLmfeqLQeq o75uIQAEwECM2gU= =J+s/ -----END PGP SIGNATURE----- Sat Jun 1 05:40:33 UTC 2024 I: Checking whether the package is not for us Sat Jun 1 05:40:33 UTC 2024 I: Starting 1st build on remote node ionos15-amd64.debian.net. Sat Jun 1 05:40:33 UTC 2024 I: Preparing to do remote build '1' on ionos15-amd64.debian.net. Sat Jun 1 05:41:09 UTC 2024 I: Deleting $TMPDIR on ionos15-amd64.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Fri Jul 4 00:03:35 -12 2025 I: pbuilder-time-stamp: 1751630615 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [scythe_0.994+git20141017.20d3cff-4.dsc] I: copying [./scythe_0.994+git20141017.20d3cff.orig.tar.xz] I: copying [./scythe_0.994+git20141017.20d3cff-4.debian.tar.xz] I: Extracting source gpgv: Signature made Sun May 12 18:23:59 2024 gpgv: using RSA key 8F91B227C7D6F2B1948C8236793CF67E8F0D11DA gpgv: issuer "emollier@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./scythe_0.994+git20141017.20d3cff-4.dsc: no acceptable signature found dpkg-source: info: extracting scythe in scythe-0.994+git20141017.20d3cff dpkg-source: info: unpacking scythe_0.994+git20141017.20d3cff.orig.tar.xz dpkg-source: info: unpacking scythe_0.994+git20141017.20d3cff-4.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying 0001-Makefile-cleaning-for-debian.patch dpkg-source: info: applying 0002-Fix-typos-in-binary.patch dpkg-source: info: applying 0003-Get-package-version-from-dpkg-parsechangelog.patch dpkg-source: info: applying 0004-Include-CPPFLAGS-in-CFLAGS.patch dpkg-source: info: applying 0005-treat-VERSION-as-string.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/2490838/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='amd64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=42 ' DISTRIBUTION='unstable' HOME='/root' HOST_ARCH='amd64' IFS=' ' INVOCATION_ID='cc6b42704214453ba2ef00d4e5a5da46' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='2490838' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.dwuPOTUa/pbuilderrc_nE1D --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.dwuPOTUa/b1 --logfile b1/build.log scythe_0.994+git20141017.20d3cff-4.dsc' SUDO_GID='111' SUDO_UID='106' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://213.165.73.152:3128' I: uname -a Linux ionos15-amd64 6.7.12+bpo-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.7.12-1~bpo12+1 (2024-05-06) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Jun 30 14:05 /bin -> usr/bin I: user script /srv/workspace/pbuilder/2490838/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: amd64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), zlib1g-dev, markdown, check dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19719 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on zlib1g-dev; however: Package zlib1g-dev is not installed. pbuilder-satisfydepends-dummy depends on markdown; however: Package markdown is not installed. pbuilder-satisfydepends-dummy depends on check; however: Package check is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} check{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libdebhelper-perl{a} libelf1t64{a} libfile-stripnondeterminism-perl{a} libicu72{a} libmagic-mgc{a} libmagic1t64{a} libpipeline1{a} libsubunit-dev{a} libsubunit0{a} libtool{a} libuchardet0{a} libxml2{a} m4{a} man-db{a} markdown{a} po-debconf{a} sensible-utils{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: curl libarchive-cpio-perl libltdl-dev libmail-sendmail-perl lynx wget 0 packages upgraded, 34 newly installed, 0 to remove and 0 not upgraded. Need to get 20.1 MB of archives. After unpacking 75.4 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian unstable/main amd64 sensible-utils all 0.0.22 [22.4 kB] Get: 2 http://deb.debian.org/debian unstable/main amd64 libmagic-mgc amd64 1:5.45-3 [314 kB] Get: 3 http://deb.debian.org/debian unstable/main amd64 libmagic1t64 amd64 1:5.45-3 [105 kB] Get: 4 http://deb.debian.org/debian unstable/main amd64 file amd64 1:5.45-3 [42.9 kB] Get: 5 http://deb.debian.org/debian unstable/main amd64 gettext-base amd64 0.21-14+b1 [161 kB] Get: 6 http://deb.debian.org/debian unstable/main amd64 libuchardet0 amd64 0.0.8-1+b1 [68.8 kB] Get: 7 http://deb.debian.org/debian unstable/main amd64 groff-base amd64 1.23.0-4 [1180 kB] Get: 8 http://deb.debian.org/debian unstable/main amd64 bsdextrautils amd64 2.40.1-4 [95.7 kB] Get: 9 http://deb.debian.org/debian unstable/main amd64 libpipeline1 amd64 1.5.7-2 [38.0 kB] Get: 10 http://deb.debian.org/debian unstable/main amd64 man-db amd64 2.12.1-1 [1411 kB] Get: 11 http://deb.debian.org/debian unstable/main amd64 m4 amd64 1.4.19-4 [287 kB] Get: 12 http://deb.debian.org/debian unstable/main amd64 autoconf all 2.71-3 [332 kB] Get: 13 http://deb.debian.org/debian unstable/main amd64 autotools-dev all 20220109.1 [51.6 kB] Get: 14 http://deb.debian.org/debian unstable/main amd64 automake all 1:1.16.5-1.3 [823 kB] Get: 15 http://deb.debian.org/debian unstable/main amd64 autopoint all 0.21-14 [496 kB] Get: 16 http://deb.debian.org/debian unstable/main amd64 libsubunit0 amd64 1.4.2-3 [6160 B] Get: 17 http://deb.debian.org/debian unstable/main amd64 libsubunit-dev amd64 1.4.2-3 [7080 B] Get: 18 http://deb.debian.org/debian unstable/main amd64 check amd64 0.15.2-2+b1 [113 kB] Get: 19 http://deb.debian.org/debian unstable/main amd64 libdebhelper-perl all 13.15.3 [88.0 kB] Get: 20 http://deb.debian.org/debian unstable/main amd64 libtool all 2.4.7-7 [517 kB] Get: 21 http://deb.debian.org/debian unstable/main amd64 dh-autoreconf all 20 [17.1 kB] Get: 22 http://deb.debian.org/debian unstable/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 23 http://deb.debian.org/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB] Get: 24 http://deb.debian.org/debian unstable/main amd64 dh-strip-nondeterminism all 1.14.0-1 [8448 B] Get: 25 http://deb.debian.org/debian unstable/main amd64 libelf1t64 amd64 0.191-1+b1 [189 kB] Get: 26 http://deb.debian.org/debian unstable/main amd64 dwz amd64 0.15-1+b1 [110 kB] Get: 27 http://deb.debian.org/debian unstable/main amd64 libicu72 amd64 72.1-4+b1 [9395 kB] Get: 28 http://deb.debian.org/debian unstable/main amd64 libxml2 amd64 2.12.7+dfsg-2 [670 kB] Get: 29 http://deb.debian.org/debian unstable/main amd64 gettext amd64 0.21-14+b1 [1301 kB] Get: 30 http://deb.debian.org/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 31 http://deb.debian.org/debian unstable/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 32 http://deb.debian.org/debian unstable/main amd64 debhelper all 13.15.3 [901 kB] Get: 33 http://deb.debian.org/debian unstable/main amd64 markdown all 1.0.1-12 [17.7 kB] Get: 34 http://deb.debian.org/debian unstable/main amd64 zlib1g-dev amd64 1:1.3.dfsg+really1.3.1-1 [919 kB] Fetched 20.1 MB in 3s (5837 kB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package sensible-utils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19719 files and directories currently installed.) Preparing to unpack .../00-sensible-utils_0.0.22_all.deb ... Unpacking sensible-utils (0.0.22) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../01-libmagic-mgc_1%3a5.45-3_amd64.deb ... Unpacking libmagic-mgc (1:5.45-3) ... Selecting previously unselected package libmagic1t64:amd64. Preparing to unpack .../02-libmagic1t64_1%3a5.45-3_amd64.deb ... Unpacking libmagic1t64:amd64 (1:5.45-3) ... Selecting previously unselected package file. Preparing to unpack .../03-file_1%3a5.45-3_amd64.deb ... Unpacking file (1:5.45-3) ... Selecting previously unselected package gettext-base. Preparing to unpack .../04-gettext-base_0.21-14+b1_amd64.deb ... Unpacking gettext-base (0.21-14+b1) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../05-libuchardet0_0.0.8-1+b1_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.8-1+b1) ... Selecting previously unselected package groff-base. Preparing to unpack .../06-groff-base_1.23.0-4_amd64.deb ... Unpacking groff-base (1.23.0-4) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../07-bsdextrautils_2.40.1-4_amd64.deb ... Unpacking bsdextrautils (2.40.1-4) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../08-libpipeline1_1.5.7-2_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.7-2) ... Selecting previously unselected package man-db. Preparing to unpack .../09-man-db_2.12.1-1_amd64.deb ... Unpacking man-db (2.12.1-1) ... Selecting previously unselected package m4. Preparing to unpack .../10-m4_1.4.19-4_amd64.deb ... Unpacking m4 (1.4.19-4) ... Selecting previously unselected package autoconf. Preparing to unpack .../11-autoconf_2.71-3_all.deb ... Unpacking autoconf (2.71-3) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../12-autotools-dev_20220109.1_all.deb ... Unpacking autotools-dev (20220109.1) ... Selecting previously unselected package automake. Preparing to unpack .../13-automake_1%3a1.16.5-1.3_all.deb ... Unpacking automake (1:1.16.5-1.3) ... Selecting previously unselected package autopoint. Preparing to unpack .../14-autopoint_0.21-14_all.deb ... Unpacking autopoint (0.21-14) ... Selecting previously unselected package libsubunit0:amd64. Preparing to unpack .../15-libsubunit0_1.4.2-3_amd64.deb ... Unpacking libsubunit0:amd64 (1.4.2-3) ... Selecting previously unselected package libsubunit-dev:amd64. Preparing to unpack .../16-libsubunit-dev_1.4.2-3_amd64.deb ... Unpacking libsubunit-dev:amd64 (1.4.2-3) ... Selecting previously unselected package check:amd64. Preparing to unpack .../17-check_0.15.2-2+b1_amd64.deb ... Unpacking check:amd64 (0.15.2-2+b1) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../18-libdebhelper-perl_13.15.3_all.deb ... Unpacking libdebhelper-perl (13.15.3) ... Selecting previously unselected package libtool. Preparing to unpack .../19-libtool_2.4.7-7_all.deb ... Unpacking libtool (2.4.7-7) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../20-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../21-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../22-libfile-stripnondeterminism-perl_1.14.0-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.14.0-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../23-dh-strip-nondeterminism_1.14.0-1_all.deb ... Unpacking dh-strip-nondeterminism (1.14.0-1) ... Selecting previously unselected package libelf1t64:amd64. Preparing to unpack .../24-libelf1t64_0.191-1+b1_amd64.deb ... Unpacking libelf1t64:amd64 (0.191-1+b1) ... Selecting previously unselected package dwz. Preparing to unpack .../25-dwz_0.15-1+b1_amd64.deb ... Unpacking dwz (0.15-1+b1) ... Selecting previously unselected package libicu72:amd64. Preparing to unpack .../26-libicu72_72.1-4+b1_amd64.deb ... Unpacking libicu72:amd64 (72.1-4+b1) ... Selecting previously unselected package libxml2:amd64. Preparing to unpack .../27-libxml2_2.12.7+dfsg-2_amd64.deb ... Unpacking libxml2:amd64 (2.12.7+dfsg-2) ... Selecting previously unselected package gettext. Preparing to unpack .../28-gettext_0.21-14+b1_amd64.deb ... Unpacking gettext (0.21-14+b1) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../29-intltool-debian_0.35.0+20060710.6_all.deb ... Unpacking intltool-debian (0.35.0+20060710.6) ... Selecting previously unselected package po-debconf. Preparing to unpack .../30-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../31-debhelper_13.15.3_all.deb ... Unpacking debhelper (13.15.3) ... Selecting previously unselected package markdown. Preparing to unpack .../32-markdown_1.0.1-12_all.deb ... Unpacking markdown (1.0.1-12) ... Selecting previously unselected package zlib1g-dev:amd64. Preparing to unpack .../33-zlib1g-dev_1%3a1.3.dfsg+really1.3.1-1_amd64.deb ... Unpacking zlib1g-dev:amd64 (1:1.3.dfsg+really1.3.1-1) ... Setting up libpipeline1:amd64 (1.5.7-2) ... Setting up libicu72:amd64 (72.1-4+b1) ... Setting up bsdextrautils (2.40.1-4) ... Setting up libmagic-mgc (1:5.45-3) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libdebhelper-perl (13.15.3) ... Setting up libmagic1t64:amd64 (1:5.45-3) ... Setting up gettext-base (0.21-14+b1) ... Setting up m4 (1.4.19-4) ... Setting up file (1:5.45-3) ... Setting up libsubunit0:amd64 (1.4.2-3) ... Setting up libelf1t64:amd64 (0.191-1+b1) ... Setting up autotools-dev (20220109.1) ... Setting up autopoint (0.21-14) ... Setting up autoconf (2.71-3) ... Setting up zlib1g-dev:amd64 (1:1.3.dfsg+really1.3.1-1) ... Setting up dwz (0.15-1+b1) ... Setting up sensible-utils (0.0.22) ... Setting up libuchardet0:amd64 (0.0.8-1+b1) ... Setting up libxml2:amd64 (2.12.7+dfsg-2) ... Setting up markdown (1.0.1-12) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.14.0-1) ... Setting up gettext (0.21-14+b1) ... Setting up libtool (2.4.7-7) ... Setting up libsubunit-dev:amd64 (1.4.2-3) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up check:amd64 (0.15.2-2+b1) ... Setting up dh-strip-nondeterminism (1.14.0-1) ... Setting up groff-base (1.23.0-4) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.12.1-1) ... Not building database; man-db/auto-update is not 'true'. Setting up debhelper (13.15.3) ... Processing triggers for libc-bin (2.38-11) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/scythe-0.994+git20141017.20d3cff/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../scythe_0.994+git20141017.20d3cff-4_source.changes dpkg-buildpackage: info: source package scythe dpkg-buildpackage: info: source version 0.994+git20141017.20d3cff-4 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Étienne Mollier dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 debian/rules clean dh clean dh_auto_clean make -j42 distclean make[1]: Entering directory '/build/reproducible-path/scythe-0.994+git20141017.20d3cff' rm -rf *.o ./scythe ./test-scythe ./libscythe.so *.dSYM rm -rf *.tar.gz make[1]: Leaving directory '/build/reproducible-path/scythe-0.994+git20141017.20d3cff' dh_clean debian/rules binary dh binary dh_update_autotools_config dh_autoreconf dh_auto_configure dh_auto_build make -j42 "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/reproducible-path/scythe-0.994+git20141017.20d3cff' cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/scythe-0.994+git20141017.20d3cff=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -pedantic -DVERSION='"0.994+git20141017.20d3cff-4"' -std=gnu99 -fPIC -c src/match.c -o match.o cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/scythe-0.994+git20141017.20d3cff=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -pedantic -DVERSION='"0.994+git20141017.20d3cff-4"' -std=gnu99 -fPIC -c src/util.c -o util.o cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/scythe-0.994+git20141017.20d3cff=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -pedantic -DVERSION='"0.994+git20141017.20d3cff-4"' -std=gnu99 -fPIC -c src/prob.c -o prob.o cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/scythe-0.994+git20141017.20d3cff=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -pedantic -DVERSION='"0.994+git20141017.20d3cff-4"' -std=gnu99 -fPIC -c src/scythe.c -o scythe.o src/scythe.c: In function 'main': src/scythe.c:135:37: warning: statement will never be executed [-Wswitch-unreachable] 135 | if (long_options[option_index].flag != 0) | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/scythe-0.994+git20141017.20d3cff=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -pedantic -DVERSION='"0.994+git20141017.20d3cff-4"' -std=gnu99 -fPIC -c src/tests/tests.c -o tests.o cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/scythe-0.994+git20141017.20d3cff=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -pedantic -DVERSION='"0.994+git20141017.20d3cff-4"' -std=gnu99 -fPIC -shared -o libscythe.so match.o util.o prob.o -Wl,-z,relro -Wl,-z,now -lz -lm cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/scythe-0.994+git20141017.20d3cff=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -pedantic -DVERSION='"0.994+git20141017.20d3cff-4"' -std=gnu99 -fPIC match.o util.o prob.o tests.o -o test-scythe -Wl,-z,relro -Wl,-z,now -lz -lm -lcheck cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/scythe-0.994+git20141017.20d3cff=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -pedantic -DVERSION='"0.994+git20141017.20d3cff-4"' -std=gnu99 -fPIC match.o util.o prob.o scythe.o -o scythe -Wl,-z,relro -Wl,-z,now -lz -lm make[1]: Leaving directory '/build/reproducible-path/scythe-0.994+git20141017.20d3cff' debian/rules execute_after_dh_auto_build make[1]: Entering directory '/build/reproducible-path/scythe-0.994+git20141017.20d3cff' markdown README.md > README.html make[1]: Leaving directory '/build/reproducible-path/scythe-0.994+git20141017.20d3cff' dh_auto_test make -j42 test make[1]: Entering directory '/build/reproducible-path/scythe-0.994+git20141017.20d3cff' ./test-scythe PASSED TEST 'score_sequence' PASSED TEST 'sum of score_sequence' tests: 2 passed: 2 failed: 0 make[1]: Leaving directory '/build/reproducible-path/scythe-0.994+git20141017.20d3cff' create-stamp debian/debhelper-build-stamp dh_prep dh_auto_install --destdir=debian/scythe/ dh_install dh_installdocs dh_installchangelogs dh_installman dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'scythe' in '../scythe_0.994+git20141017.20d3cff-4_amd64.deb'. dpkg-deb: building package 'scythe-dbgsym' in '../scythe-dbgsym_0.994+git20141017.20d3cff-4_amd64.deb'. dpkg-genbuildinfo --build=binary -O../scythe_0.994+git20141017.20d3cff-4_amd64.buildinfo dpkg-genchanges --build=binary -O../scythe_0.994+git20141017.20d3cff-4_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/2490838 and its subdirectories I: Current time: Fri Jul 4 00:04:08 -12 2025 I: pbuilder-time-stamp: 1751630648 Sat Jun 1 05:41:10 UTC 2024 I: 1st build successful. Starting 2nd build on remote node ionos11-amd64.debian.net. Sat Jun 1 05:41:10 UTC 2024 I: Preparing to do remote build '2' on ionos11-amd64.debian.net. Sat Jun 1 05:44:14 UTC 2024 I: Deleting $TMPDIR on ionos11-amd64.debian.net. Sat Jun 1 05:44:15 UTC 2024 I: scythe_0.994+git20141017.20d3cff-4_amd64.changes: Format: 1.8 Date: Sun, 12 May 2024 20:10:50 +0200 Source: scythe Binary: scythe scythe-dbgsym Architecture: amd64 Version: 0.994+git20141017.20d3cff-4 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Étienne Mollier Description: scythe - Bayesian adaptor trimmer for sequencing reads Closes: 1048084 Changes: scythe (0.994+git20141017.20d3cff-4) unstable; urgency=medium . * Team upload. * d/control: declare compliance to standards version 4.7.0. * d/{control,rules}: make documentation aware of nodoc profile. This prevents production of the README.html and in return allows running builds without markdown for the nodoc build profile. * d/clean: new: cleanup README.html. (Closes: #1048084) Checksums-Sha1: 0ea211802ccd9ab7f35db02e38c16267782486c9 24788 scythe-dbgsym_0.994+git20141017.20d3cff-4_amd64.deb 243e4cbdb9bade210548a48bdce4ae6b59d6e963 5236 scythe_0.994+git20141017.20d3cff-4_amd64.buildinfo 8d2c9fd16317b1e2d4dbcc9e6d8f950103e1f753 18208 scythe_0.994+git20141017.20d3cff-4_amd64.deb Checksums-Sha256: 76f6bba1666d0eafa82a44f75e47f76f3b639e99b6b597fc459525ae758d5fb0 24788 scythe-dbgsym_0.994+git20141017.20d3cff-4_amd64.deb 5a893a834f10c0f66fd55c323f61f9a9e374e1f35e42ffaa7ba02ff6ed9cbc3e 5236 scythe_0.994+git20141017.20d3cff-4_amd64.buildinfo 5d90859fa7dd258e71fee1be812402b928a96a0d5465ff53bce8ab0f1f7d0284 18208 scythe_0.994+git20141017.20d3cff-4_amd64.deb Files: 6aacc8e0304423bd714604c5dda92bea 24788 debug optional scythe-dbgsym_0.994+git20141017.20d3cff-4_amd64.deb de5f4ed149713aae3c6e022dbf45d0aa 5236 science optional scythe_0.994+git20141017.20d3cff-4_amd64.buildinfo 81eb5e2af7013a638c42782973ae4ec6 18208 science optional scythe_0.994+git20141017.20d3cff-4_amd64.deb Sat Jun 1 05:44:16 UTC 2024 I: diffoscope 268 will be used to compare the two builds: Running as unit: rb-diffoscope-amd64_16-22491.service # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.dwuPOTUa/scythe_0.994+git20141017.20d3cff-4.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.dwuPOTUa/scythe_0.994+git20141017.20d3cff-4.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.dwuPOTUa/scythe_0.994+git20141017.20d3cff-4.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.dwuPOTUa/b1/scythe_0.994+git20141017.20d3cff-4_amd64.changes /srv/reproducible-results/rbuild-debian/r-b-build.dwuPOTUa/b2/scythe_0.994+git20141017.20d3cff-4_amd64.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 0.624s) 0.624s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.138s) 0.138s 12 calls diffoscope.comparators.binary.FilesystemFile ## specialize (total time: 0.000s) 0.000s 1 call specialize Finished with result: success Main processes terminated with: code=exited/status=0 Service runtime: 1.135s CPU time consumed: 1.134s Sat Jun 1 05:44:18 UTC 2024 I: diffoscope 268 found no differences in the changes files, and a .buildinfo file also exists. Sat Jun 1 05:44:18 UTC 2024 I: scythe from unstable built successfully and reproducibly on amd64. Sat Jun 1 05:44:19 UTC 2024 I: Submitting .buildinfo files to external archives: Sat Jun 1 05:44:19 UTC 2024 I: Submitting 8.0K b1/scythe_0.994+git20141017.20d3cff-4_amd64.buildinfo.asc Sat Jun 1 05:44:20 UTC 2024 I: Submitting 8.0K b2/scythe_0.994+git20141017.20d3cff-4_amd64.buildinfo.asc Sat Jun 1 05:44:21 UTC 2024 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Sat Jun 1 05:44:21 UTC 2024 I: Done submitting .buildinfo files. Sat Jun 1 05:44:21 UTC 2024 I: Removing signed scythe_0.994+git20141017.20d3cff-4_amd64.buildinfo.asc files: removed './b1/scythe_0.994+git20141017.20d3cff-4_amd64.buildinfo.asc' removed './b2/scythe_0.994+git20141017.20d3cff-4_amd64.buildinfo.asc'