Tue May 21 02:26:22 UTC 2024 I: starting to build racon/unstable/amd64 on jenkins on '2024-05-21 02:26' Tue May 21 02:26:22 UTC 2024 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/amd64_8/21901/console.log Tue May 21 02:26:22 UTC 2024 I: Downloading source for unstable/racon=1.5.0-3 --2024-05-21 02:26:22-- http://deb.debian.org/debian/pool/main/r/racon/racon_1.5.0-3.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2106 (2.1K) [text/prs.lines.tag] Saving to: ‘racon_1.5.0-3.dsc’ 0K .. 100% 213M=0s 2024-05-21 02:26:22 (213 MB/s) - ‘racon_1.5.0-3.dsc’ saved [2106/2106] Tue May 21 02:26:22 UTC 2024 I: racon_1.5.0-3.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: racon Binary: racon Architecture: any Version: 1.5.0-3 Maintainer: Debian Med Packaging Team Uploaders: Cédric Lood , Andreas Tille Homepage: https://github.com/lbcb-sci/racon Standards-Version: 4.6.1 Vcs-Browser: https://salsa.debian.org/med-team/racon Vcs-Git: https://salsa.debian.org/med-team/racon.git Testsuite: autopkgtest Build-Depends: debhelper-compat (= 13), cmake, libgtest-dev, libbioparser-dev, libcereal-dev, libedlib-dev (>= 1.2.7-3~), libspoa-dev, libthread-pool-dev (>= 3.0.2), rampler Package-List: racon deb science optional arch=any Checksums-Sha1: c508bea6f7b627e1796f2017669a8e99ed548ddd 3084154 racon_1.5.0.orig.tar.gz 5d5d6ba7f343bf6ee3124a052eb1858b9431dbf1 20652 racon_1.5.0-3.debian.tar.xz Checksums-Sha256: 58fdbbd88f0990b18e3139280aa4fa81e138a9cf0761edd66c43982af784d395 3084154 racon_1.5.0.orig.tar.gz 87ebd723dfb828888b59a5ed30143aa24ec3798c933f41e00196dacc3874d911 20652 racon_1.5.0-3.debian.tar.xz Files: de1982c33464fc7cec8a172931a6cf00 3084154 racon_1.5.0.orig.tar.gz face5096f46b2ce6c9c836bb01cf1603 20652 racon_1.5.0-3.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCgAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAmM1k2ERHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtHvaQ/+N79w1AElJT5zodwml2cN53AhsH46O5QP JzGAY+aYLx/AZ9C6VIbd6eiTsZ+qNDSWLqqd/ABykcNbZEA+dBiRpX08U4/5OCNi zhXwtP+rO9w0znNpX6S8jUHMnC9yFlwW4t/1GmNAZ42byGm1vA5/6IXTkg2icHL0 8SSvibSqiZgNhiitaMPnKs1fSQA2ymTONHczdKuSRjTzpVkADmdpQch3j0TwZmF5 /hcYo4651y2NbVVJRbTEwPNoDXUE3TaXo0UZVojz5sOYHDQBGcbrai64O7ycB7Pd w+y3JfPaHzfRm23vsnO6PbpG+GFOflG54PIlNHa0Z90QHGZSlZym2gjvU36M2fa9 t3ZMnBLcUBkvTPWJeis9H3mv1/gmFtomkxf0cMz928nSwO8P1MvhoyrCu66q7PzO sOI8KxZ4tdbz+JvwHaa/FBrwl+n1krpXMD8PwoGxsLrY0a/gErVXooD3YoeTzv6d U/xsrofS7jo8CIaWTT2aMoK5JN5YRbk12zH2hWnJw/7XOKBcnTbIhQjRpf4AwfjS X8IJf9txoPJEn1atb/Af7F4FqOmMoAwlDsJPrftzo9bPpfaUocqekHZZJsMro9Xi fbm+SfYqW1SkeLNSR2twNJG1r+eZm6dNsipnerAsTGM7ejcAoyu0LjtZnpoGgS/5 41EO1XUq4VQ= =933u -----END PGP SIGNATURE----- Tue May 21 02:26:22 UTC 2024 I: Checking whether the package is not for us Tue May 21 02:26:22 UTC 2024 I: Starting 1st build on remote node ionos15-amd64.debian.net. Tue May 21 02:26:22 UTC 2024 I: Preparing to do remote build '1' on ionos15-amd64.debian.net. Tue May 21 02:28:26 UTC 2024 I: Deleting $TMPDIR on ionos15-amd64.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Sun Jun 22 20:49:24 -12 2025 I: pbuilder-time-stamp: 1750668564 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [racon_1.5.0-3.dsc] I: copying [./racon_1.5.0.orig.tar.gz] I: copying [./racon_1.5.0-3.debian.tar.xz] I: Extracting source gpgv: Signature made Thu Sep 29 12:45:21 2022 gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./racon_1.5.0-3.dsc: no acceptable signature found dpkg-source: info: extracting racon in racon-1.5.0 dpkg-source: info: unpacking racon_1.5.0.orig.tar.gz dpkg-source: info: unpacking racon_1.5.0-3.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying use_debian_packaged_libs.patch dpkg-source: info: applying remove_buildpath dpkg-source: info: applying py3 I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/2967243/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='amd64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=42 ' DISTRIBUTION='unstable' HOME='/root' HOST_ARCH='amd64' IFS=' ' INVOCATION_ID='a31e032d27db497c9aaa5d10add288f9' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='2967243' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.YCVQZTGV/pbuilderrc_Rkdc --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.YCVQZTGV/b1 --logfile b1/build.log racon_1.5.0-3.dsc' SUDO_GID='111' SUDO_UID='106' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://213.165.73.152:3128' I: uname -a Linux ionos15-amd64 6.6.13+bpo-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.6.13-1~bpo12+1 (2024-02-15) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Jun 22 14:05 /bin -> usr/bin I: user script /srv/workspace/pbuilder/2967243/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: amd64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), cmake, libgtest-dev, libbioparser-dev, libcereal-dev, libedlib-dev (>= 1.2.7-3~), libspoa-dev, libthread-pool-dev (>= 3.0.2), rampler dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19718 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on cmake; however: Package cmake is not installed. pbuilder-satisfydepends-dummy depends on libgtest-dev; however: Package libgtest-dev is not installed. pbuilder-satisfydepends-dummy depends on libbioparser-dev; however: Package libbioparser-dev is not installed. pbuilder-satisfydepends-dummy depends on libcereal-dev; however: Package libcereal-dev is not installed. pbuilder-satisfydepends-dummy depends on libedlib-dev (>= 1.2.7-3~); however: Package libedlib-dev is not installed. pbuilder-satisfydepends-dummy depends on libspoa-dev; however: Package libspoa-dev is not installed. pbuilder-satisfydepends-dummy depends on libthread-pool-dev (>= 3.0.2); however: Package libthread-pool-dev is not installed. pbuilder-satisfydepends-dummy depends on rampler; however: Package rampler is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} cmake{a} cmake-data{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} googletest{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libarchive13t64{a} libbioparser-dev{a} libbiosoup-dev{a} libbrotli1{a} libcereal-dev{a} libcom-err2{a} libcurl4t64{a} libdata-optlist-perl{a} libdebhelper-perl{a} libedlib-dev{a} libedlib1{a} libelf1t64{a} libexpat1{a} libfile-stripnondeterminism-perl{a} libgssapi-krb5-2{a} libgtest-dev{a} libicu72{a} libjsoncpp25{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} libldap-2.5-0{a} libmagic-mgc{a} libmagic1t64{a} libnghttp2-14{a} libparams-util-perl{a} libpipeline1{a} libproc2-0{a} libpsl5t64{a} librhash0{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libspoa-dev{a} libspoa7.0.0{a} libssh2-1t64{a} libsub-exporter-perl{a} libsub-install-perl{a} libsub-override-perl{a} libsub-prototype-perl{a} libthread-pool-dev{a} libtool{a} libuchardet0{a} libuv1t64{a} libxml2{a} m4{a} man-db{a} po-debconf{a} procps{a} rampler{a} rapidjson-dev{a} sensible-utils{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl krb5-locales libarchive-cpio-perl libldap-common libltdl-dev libmail-sendmail-perl libsasl2-modules lynx psmisc publicsuffix wget 0 packages upgraded, 72 newly installed, 0 to remove and 0 not upgraded. Need to get 38.0 MB of archives. After unpacking 143 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian unstable/main amd64 libproc2-0 amd64 2:4.0.4-4 [64.6 kB] Get: 2 http://deb.debian.org/debian unstable/main amd64 procps amd64 2:4.0.4-4 [880 kB] Get: 3 http://deb.debian.org/debian unstable/main amd64 sensible-utils all 0.0.22 [22.4 kB] Get: 4 http://deb.debian.org/debian unstable/main amd64 libmagic-mgc amd64 1:5.45-3 [314 kB] Get: 5 http://deb.debian.org/debian unstable/main amd64 libmagic1t64 amd64 1:5.45-3 [105 kB] Get: 6 http://deb.debian.org/debian unstable/main amd64 file amd64 1:5.45-3 [42.9 kB] Get: 7 http://deb.debian.org/debian unstable/main amd64 gettext-base amd64 0.21-14+b1 [161 kB] Get: 8 http://deb.debian.org/debian unstable/main amd64 libuchardet0 amd64 0.0.8-1+b1 [68.8 kB] Get: 9 http://deb.debian.org/debian unstable/main amd64 groff-base amd64 1.23.0-4 [1180 kB] Get: 10 http://deb.debian.org/debian unstable/main amd64 bsdextrautils amd64 2.40.1-1 [94.1 kB] Get: 11 http://deb.debian.org/debian unstable/main amd64 libpipeline1 amd64 1.5.7-2 [38.0 kB] Get: 12 http://deb.debian.org/debian unstable/main amd64 man-db amd64 2.12.1-1 [1411 kB] Get: 13 http://deb.debian.org/debian unstable/main amd64 m4 amd64 1.4.19-4 [287 kB] Get: 14 http://deb.debian.org/debian unstable/main amd64 autoconf all 2.71-3 [332 kB] Get: 15 http://deb.debian.org/debian unstable/main amd64 autotools-dev all 20220109.1 [51.6 kB] Get: 16 http://deb.debian.org/debian unstable/main amd64 automake all 1:1.16.5-1.3 [823 kB] Get: 17 http://deb.debian.org/debian unstable/main amd64 autopoint all 0.21-14 [496 kB] Get: 18 http://deb.debian.org/debian unstable/main amd64 libicu72 amd64 72.1-4+b1 [9395 kB] Get: 19 http://deb.debian.org/debian unstable/main amd64 libxml2 amd64 2.9.14+dfsg-1.3+b3 [692 kB] Get: 20 http://deb.debian.org/debian unstable/main amd64 libarchive13t64 amd64 3.7.2-2 [346 kB] Get: 21 http://deb.debian.org/debian unstable/main amd64 libbrotli1 amd64 1.1.0-2+b3 [305 kB] Get: 22 http://deb.debian.org/debian unstable/main amd64 libkrb5support0 amd64 1.20.1-6+b1 [33.3 kB] Get: 23 http://deb.debian.org/debian unstable/main amd64 libcom-err2 amd64 1.47.1~rc2-1 [22.6 kB] Get: 24 http://deb.debian.org/debian unstable/main amd64 libk5crypto3 amd64 1.20.1-6+b1 [79.8 kB] Get: 25 http://deb.debian.org/debian unstable/main amd64 libkeyutils1 amd64 1.6.3-3 [8952 B] Get: 26 http://deb.debian.org/debian unstable/main amd64 libkrb5-3 amd64 1.20.1-6+b1 [333 kB] Get: 27 http://deb.debian.org/debian unstable/main amd64 libgssapi-krb5-2 amd64 1.20.1-6+b1 [135 kB] Get: 28 http://deb.debian.org/debian unstable/main amd64 libsasl2-modules-db amd64 2.1.28+dfsg1-6 [19.5 kB] Get: 29 http://deb.debian.org/debian unstable/main amd64 libsasl2-2 amd64 2.1.28+dfsg1-6 [56.9 kB] Get: 30 http://deb.debian.org/debian unstable/main amd64 libldap-2.5-0 amd64 2.5.17+dfsg-1 [186 kB] Get: 31 http://deb.debian.org/debian unstable/main amd64 libnghttp2-14 amd64 1.61.0-1+b1 [75.6 kB] Get: 32 http://deb.debian.org/debian unstable/main amd64 libpsl5t64 amd64 0.21.2-1.1 [56.8 kB] Get: 33 http://deb.debian.org/debian unstable/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d.1-2+b4 [58.5 kB] Get: 34 http://deb.debian.org/debian unstable/main amd64 libssh2-1t64 amd64 1.11.0-4.1+b2 [215 kB] Get: 35 http://deb.debian.org/debian unstable/main amd64 libcurl4t64 amd64 8.7.1-5 [441 kB] Get: 36 http://deb.debian.org/debian unstable/main amd64 libexpat1 amd64 2.6.2-1 [103 kB] Get: 37 http://deb.debian.org/debian unstable/main amd64 libjsoncpp25 amd64 1.9.5-6+b2 [81.9 kB] Get: 38 http://deb.debian.org/debian unstable/main amd64 librhash0 amd64 1.4.3-3+b1 [132 kB] Get: 39 http://deb.debian.org/debian unstable/main amd64 libuv1t64 amd64 1.48.0-4 [148 kB] Get: 40 http://deb.debian.org/debian unstable/main amd64 cmake-data all 3.29.3-1 [2167 kB] Get: 41 http://deb.debian.org/debian unstable/main amd64 cmake amd64 3.29.3-1+b1 [10.7 MB] Get: 42 http://deb.debian.org/debian unstable/main amd64 libdebhelper-perl all 13.15.3 [88.0 kB] Get: 43 http://deb.debian.org/debian unstable/main amd64 libtool all 2.4.7-7 [517 kB] Get: 44 http://deb.debian.org/debian unstable/main amd64 dh-autoreconf all 20 [17.1 kB] Get: 45 http://deb.debian.org/debian unstable/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 46 http://deb.debian.org/debian unstable/main amd64 libparams-util-perl amd64 1.102-3 [24.0 kB] Get: 47 http://deb.debian.org/debian unstable/main amd64 libsub-install-perl all 0.929-1 [10.5 kB] Get: 48 http://deb.debian.org/debian unstable/main amd64 libdata-optlist-perl all 0.114-1 [10.6 kB] Get: 49 http://deb.debian.org/debian unstable/main amd64 libsub-exporter-perl all 0.990-1 [50.6 kB] Get: 50 http://deb.debian.org/debian unstable/main amd64 libsub-prototype-perl amd64 0.03-2+b2 [9744 B] Get: 51 http://deb.debian.org/debian unstable/main amd64 libsub-override-perl all 0.11-1 [10.4 kB] Get: 52 http://deb.debian.org/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.13.1-1 [19.4 kB] Get: 53 http://deb.debian.org/debian unstable/main amd64 dh-strip-nondeterminism all 1.13.1-1 [8620 B] Get: 54 http://deb.debian.org/debian unstable/main amd64 libelf1t64 amd64 0.191-1+b1 [189 kB] Get: 55 http://deb.debian.org/debian unstable/main amd64 dwz amd64 0.15-1+b1 [110 kB] Get: 56 http://deb.debian.org/debian unstable/main amd64 gettext amd64 0.21-14+b1 [1301 kB] Get: 57 http://deb.debian.org/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 58 http://deb.debian.org/debian unstable/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 59 http://deb.debian.org/debian unstable/main amd64 debhelper all 13.15.3 [901 kB] Get: 60 http://deb.debian.org/debian unstable/main amd64 googletest all 1.14.0-1 [512 kB] Get: 61 http://deb.debian.org/debian unstable/main amd64 libbiosoup-dev all 0.11.0-2 [8000 B] Get: 62 http://deb.debian.org/debian unstable/main amd64 zlib1g-dev amd64 1:1.3.dfsg+really1.3.1-1 [919 kB] Get: 63 http://deb.debian.org/debian unstable/main amd64 libbioparser-dev all 3.1.0-1 [9108 B] Get: 64 http://deb.debian.org/debian unstable/main amd64 rapidjson-dev all 1.1.0+dfsg2-7.2 [97.8 kB] Get: 65 http://deb.debian.org/debian unstable/main amd64 libcereal-dev amd64 1.3.2+dfsg-5 [221 kB] Get: 66 http://deb.debian.org/debian unstable/main amd64 libedlib1 amd64 1.2.7-5 [17.7 kB] Get: 67 http://deb.debian.org/debian unstable/main amd64 libedlib-dev amd64 1.2.7-5 [22.5 kB] Get: 68 http://deb.debian.org/debian unstable/main amd64 libgtest-dev amd64 1.14.0-1+b1 [250 kB] Get: 69 http://deb.debian.org/debian unstable/main amd64 libspoa7.0.0 amd64 4.1.4-1 [70.3 kB] Get: 70 http://deb.debian.org/debian unstable/main amd64 libspoa-dev amd64 4.1.4-1 [9400 B] Get: 71 http://deb.debian.org/debian unstable/main amd64 libthread-pool-dev amd64 4.0.0-2 [7312 B] Get: 72 http://deb.debian.org/debian unstable/main amd64 rampler amd64 2.1.1-1 [21.2 kB] Fetched 38.0 MB in 0s (121 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libproc2-0:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19718 files and directories currently installed.) Preparing to unpack .../00-libproc2-0_2%3a4.0.4-4_amd64.deb ... Unpacking libproc2-0:amd64 (2:4.0.4-4) ... Selecting previously unselected package procps. Preparing to unpack .../01-procps_2%3a4.0.4-4_amd64.deb ... Unpacking procps (2:4.0.4-4) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../02-sensible-utils_0.0.22_all.deb ... 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Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/racon-1.5.0/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../racon_1.5.0-3_source.changes dpkg-buildpackage: info: source package racon dpkg-buildpackage: info: source version 1.5.0-3 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 debian/rules clean dh clean --buildsystem=cmake dh_auto_clean -O--buildsystem=cmake dh_autoreconf_clean -O--buildsystem=cmake dh_clean -O--buildsystem=cmake debian/rules binary dh binary --buildsystem=cmake dh_update_autotools_config -O--buildsystem=cmake dh_autoreconf -O--buildsystem=cmake debian/rules override_dh_auto_configure make[1]: Entering directory '/build/reproducible-path/racon-1.5.0' dh_auto_configure -- -Dracon_build_tests=ON -Dracon_build_wrapper=ON cd obj-x86_64-linux-gnu && DEB_PYTHON_INSTALL_LAYOUT=deb cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DFETCHCONTENT_FULLY_DISCONNECTED=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run -DCMAKE_SKIP_INSTALL_ALL_DEPENDENCY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/x86_64-linux-gnu -Dracon_build_tests=ON -Dracon_build_wrapper=ON .. -- The CXX compiler identification is GNU 13.2.0 -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Configuring done 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make[3]: Entering directory '/build/reproducible-path/racon-1.5.0/obj-x86_64-linux-gnu' [ 40%] Building CXX object CMakeFiles/racon.dir/src/polisher.cpp.o [ 40%] Building CXX object CMakeFiles/racon.dir/src/overlap.cpp.o [ 40%] Building CXX object CMakeFiles/racon.dir/src/window.cpp.o [ 40%] Building CXX object CMakeFiles/racon.dir/src/sequence.cpp.o [ 50%] Building CXX object CMakeFiles/racon.dir/src/logger.cpp.o /usr/bin/c++ -I/build/reproducible-path/racon-1.5.0/src -g -O2 -ffile-prefix-map=/build/reproducible-path/racon-1.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -pedantic -std=c++11 -pthread -MD -MT CMakeFiles/racon.dir/src/overlap.cpp.o -MF CMakeFiles/racon.dir/src/overlap.cpp.o.d -o CMakeFiles/racon.dir/src/overlap.cpp.o -c /build/reproducible-path/racon-1.5.0/src/overlap.cpp /usr/bin/c++ -I/build/reproducible-path/racon-1.5.0/src -g -O2 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-ffile-prefix-map=/build/reproducible-path/racon-1.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -pedantic -std=c++11 -pthread -MD -MT CMakeFiles/racon.dir/src/sequence.cpp.o -MF CMakeFiles/racon.dir/src/sequence.cpp.o.d -o CMakeFiles/racon.dir/src/sequence.cpp.o -c /build/reproducible-path/racon-1.5.0/src/sequence.cpp /usr/bin/c++ -I/build/reproducible-path/racon-1.5.0/src -g -O2 -ffile-prefix-map=/build/reproducible-path/racon-1.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -pedantic -std=c++11 -pthread -MD -MT CMakeFiles/racon.dir/src/window.cpp.o -MF CMakeFiles/racon.dir/src/window.cpp.o.d -o CMakeFiles/racon.dir/src/window.cpp.o -c /build/reproducible-path/racon-1.5.0/src/window.cpp [ 60%] Linking CXX static library lib/libracon.a /usr/bin/cmake -P CMakeFiles/racon.dir/cmake_clean_target.cmake /usr/bin/cmake -E cmake_link_script CMakeFiles/racon.dir/link.txt --verbose=1 /usr/bin/ar qc lib/libracon.a CMakeFiles/racon.dir/src/logger.cpp.o CMakeFiles/racon.dir/src/polisher.cpp.o CMakeFiles/racon.dir/src/overlap.cpp.o CMakeFiles/racon.dir/src/sequence.cpp.o CMakeFiles/racon.dir/src/window.cpp.o /usr/bin/ranlib lib/libracon.a make[3]: Leaving directory '/build/reproducible-path/racon-1.5.0/obj-x86_64-linux-gnu' [ 60%] Built target racon make -f CMakeFiles/racon_exe.dir/build.make CMakeFiles/racon_exe.dir/depend make -f CMakeFiles/racon_test.dir/build.make CMakeFiles/racon_test.dir/depend make[3]: Entering directory '/build/reproducible-path/racon-1.5.0/obj-x86_64-linux-gnu' cd /build/reproducible-path/racon-1.5.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/racon-1.5.0 /build/reproducible-path/racon-1.5.0 /build/reproducible-path/racon-1.5.0/obj-x86_64-linux-gnu /build/reproducible-path/racon-1.5.0/obj-x86_64-linux-gnu /build/reproducible-path/racon-1.5.0/obj-x86_64-linux-gnu/CMakeFiles/racon_exe.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/racon-1.5.0/obj-x86_64-linux-gnu' cd /build/reproducible-path/racon-1.5.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/racon-1.5.0 /build/reproducible-path/racon-1.5.0 /build/reproducible-path/racon-1.5.0/obj-x86_64-linux-gnu /build/reproducible-path/racon-1.5.0/obj-x86_64-linux-gnu /build/reproducible-path/racon-1.5.0/obj-x86_64-linux-gnu/CMakeFiles/racon_test.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/racon-1.5.0/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/racon-1.5.0/obj-x86_64-linux-gnu' make -f CMakeFiles/racon_test.dir/build.make CMakeFiles/racon_test.dir/build make -f CMakeFiles/racon_exe.dir/build.make CMakeFiles/racon_exe.dir/build make[3]: Entering directory '/build/reproducible-path/racon-1.5.0/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/racon-1.5.0/obj-x86_64-linux-gnu' [ 80%] Building CXX object CMakeFiles/racon_test.dir/test/racon_test.cpp.o [ 80%] Building CXX object CMakeFiles/racon_exe.dir/src/main.cpp.o /usr/bin/c++ -DVERSION=\"1.5.0\" -I/build/reproducible-path/racon-1.5.0/src -g -O2 -ffile-prefix-map=/build/reproducible-path/racon-1.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -pedantic -std=c++11 -MD -MT CMakeFiles/racon_exe.dir/src/main.cpp.o -MF CMakeFiles/racon_exe.dir/src/main.cpp.o.d -o CMakeFiles/racon_exe.dir/src/main.cpp.o -c /build/reproducible-path/racon-1.5.0/src/main.cpp /usr/bin/c++ -DTEST_DATA=\"/build/reproducible-path/racon-1.5.0/test/data/\" -I/build/reproducible-path/racon-1.5.0/src -g -O2 -ffile-prefix-map=/build/reproducible-path/racon-1.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -pedantic -std=c++14 -DGTEST_HAS_PTHREAD=1 -MD -MT CMakeFiles/racon_test.dir/test/racon_test.cpp.o -MF CMakeFiles/racon_test.dir/test/racon_test.cpp.o.d -o CMakeFiles/racon_test.dir/test/racon_test.cpp.o -c /build/reproducible-path/racon-1.5.0/test/racon_test.cpp [ 90%] Linking CXX executable bin/racon /usr/bin/cmake -E cmake_link_script CMakeFiles/racon_exe.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/racon-1.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -pedantic -Wl,-z,relro -Wl,-z,now CMakeFiles/racon_exe.dir/src/main.cpp.o -o bin/racon lib/libracon.a -ledlib -lspoa -lpthread -lz make[3]: Leaving directory '/build/reproducible-path/racon-1.5.0/obj-x86_64-linux-gnu' [ 90%] Built target racon_exe [100%] Linking CXX executable bin/racon_test /usr/bin/cmake -E cmake_link_script CMakeFiles/racon_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/racon-1.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -pedantic -Wl,-z,relro -Wl,-z,now CMakeFiles/racon_test.dir/test/racon_test.cpp.o -o bin/racon_test lib/libracon.a -ledlib -lspoa -pthread -lz /usr/lib/x86_64-linux-gnu/libgtest_main.a /usr/lib/x86_64-linux-gnu/libgtest.a make[3]: Leaving directory '/build/reproducible-path/racon-1.5.0/obj-x86_64-linux-gnu' [100%] Built target racon_test make[2]: Leaving directory '/build/reproducible-path/racon-1.5.0/obj-x86_64-linux-gnu' /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/racon-1.5.0/obj-x86_64-linux-gnu/CMakeFiles 0 make[1]: Leaving directory '/build/reproducible-path/racon-1.5.0/obj-x86_64-linux-gnu' debian/rules override_dh_auto_test make[1]: Entering directory '/build/reproducible-path/racon-1.5.0' cd test && ../obj-*/bin/racon_test Running main() from ./googletest/src/gtest_main.cc [==========] Running 15 tests from 2 test suites. [----------] Global test environment set-up. [----------] 5 tests from RaconInitializeTest [ RUN ] RaconInitializeTest.PolisherTypeError [ OK ] RaconInitializeTest.PolisherTypeError (1 ms) [ RUN ] RaconInitializeTest.WindowLengthError [ OK ] RaconInitializeTest.WindowLengthError (0 ms) [ RUN ] RaconInitializeTest.SequencesPathExtensionError [ OK ] RaconInitializeTest.SequencesPathExtensionError (1 ms) [ RUN ] RaconInitializeTest.OverlapsPathExtensionError [ OK ] RaconInitializeTest.OverlapsPathExtensionError (3 ms) [ RUN ] RaconInitializeTest.TargetPathExtensionError [ OK ] RaconInitializeTest.TargetPathExtensionError (3 ms) [----------] 5 tests from RaconInitializeTest (10 ms total) [----------] 10 tests from RaconPolishingTest [ RUN ] RaconPolishingTest.ConsensusWithQualities [racon::Polisher::initialize] loaded target sequences 0.000487 s [racon::Polisher::initialize] loaded sequences 0.031351 s [racon::Polisher::initialize] loaded overlaps 0.000353 s [racon::Polisher::initialize] aligning overlaps [=> ] 0.019997 s [racon::Polisher::initialize] aligning overlaps [==> ] 0.029459 s [racon::Polisher::initialize] aligning overlaps [===> ] 0.040444 s [racon::Polisher::initialize] aligning overlaps [====> ] 0.048910 s [racon::Polisher::initialize] aligning overlaps [=====> ] 0.059767 s [racon::Polisher::initialize] aligning overlaps [======> ] 0.069492 s [racon::Polisher::initialize] aligning overlaps [=======> ] 0.092977 s [racon::Polisher::initialize] aligning overlaps [========> ] 0.104616 s [racon::Polisher::initialize] aligning overlaps [=========> ] 0.115259 s [racon::Polisher::initialize] aligning overlaps [==========> ] 0.124564 s [racon::Polisher::initialize] aligning overlaps [===========> ] 0.136125 s [racon::Polisher::initialize] aligning overlaps [============> ] 0.146031 s [racon::Polisher::initialize] aligning overlaps [=============> ] 0.156883 s [racon::Polisher::initialize] aligning overlaps [==============> ] 0.162415 s [racon::Polisher::initialize] aligning overlaps [===============> ] 0.170242 s [racon::Polisher::initialize] aligning overlaps [================> ] 0.191164 s [racon::Polisher::initialize] aligning overlaps [=================> ] 0.198184 s [racon::Polisher::initialize] aligning overlaps [==================> ] 0.207212 s [racon::Polisher::initialize] aligning overlaps [===================>] 0.219627 s [racon::Polisher::initialize] aligning overlaps [====================] 0.227707 s [racon::Polisher::initialize] transformed data into windows 0.001667 s [racon::Polisher::polish] generating consensus [=> ] 0.018267 s [racon::Polisher::polish] generating consensus [==> ] 0.032982 s [racon::Polisher::polish] generating consensus [===> ] 0.046534 s [racon::Polisher::polish] generating consensus [====> ] 0.067067 s [racon::Polisher::polish] generating consensus [=====> ] 0.075979 s [racon::Polisher::polish] generating consensus [======> ] 0.083842 s [racon::Polisher::polish] generating consensus [=======> ] 0.091245 s [racon::Polisher::polish] generating consensus [========> ] 0.099923 s [racon::Polisher::polish] generating consensus [=========> ] 0.110965 s [racon::Polisher::polish] generating consensus [==========> ] 0.123079 s [racon::Polisher::polish] generating consensus [===========> ] 0.143051 s [racon::Polisher::polish] generating consensus [============> ] 0.167658 s [racon::Polisher::polish] generating consensus [=============> ] 0.201561 s [racon::Polisher::polish] generating consensus [==============> ] 0.233748 s [racon::Polisher::polish] generating consensus [===============> ] 0.257718 s [racon::Polisher::polish] generating consensus [================> ] 0.274472 s [racon::Polisher::polish] generating consensus [=================> ] 0.296944 s [racon::Polisher::polish] generating consensus [==================> ] 0.309518 s [racon::Polisher::polish] generating consensus [===================>] 0.326949 s [racon::Polisher::polish] generating consensus [====================] 0.392293 s [racon::Polisher::] total = 0.666425 s [ OK ] RaconPolishingTest.ConsensusWithQualities (676 ms) [ RUN ] RaconPolishingTest.ConsensusWithoutQualities [racon::Polisher::initialize] loaded target sequences 0.000398 s [racon::Polisher::initialize] loaded sequences 0.012447 s [racon::Polisher::initialize] loaded overlaps 0.000262 s [racon::Polisher::initialize] aligning overlaps [=> ] 0.016911 s [racon::Polisher::initialize] aligning overlaps [==> ] 0.025864 s [racon::Polisher::initialize] aligning overlaps [===> ] 0.037793 s [racon::Polisher::initialize] aligning overlaps [====> ] 0.046154 s [racon::Polisher::initialize] aligning overlaps [=====> ] 0.056820 s [racon::Polisher::initialize] aligning overlaps [======> ] 0.066384 s [racon::Polisher::initialize] aligning overlaps [=======> ] 0.089528 s [racon::Polisher::initialize] aligning overlaps [========> ] 0.101105 s [racon::Polisher::initialize] aligning overlaps [=========> ] 0.110535 s [racon::Polisher::initialize] aligning overlaps [==========> ] 0.118761 s [racon::Polisher::initialize] aligning overlaps [===========> ] 0.130726 s [racon::Polisher::initialize] aligning overlaps [============> ] 0.140359 s [racon::Polisher::initialize] aligning overlaps [=============> ] 0.151182 s [racon::Polisher::initialize] aligning overlaps [==============> ] 0.156685 s [racon::Polisher::initialize] aligning overlaps [===============> ] 0.164060 s [racon::Polisher::initialize] aligning overlaps [================> ] 0.179270 s [racon::Polisher::initialize] aligning overlaps [=================> ] 0.184787 s [racon::Polisher::initialize] aligning overlaps [==================> ] 0.193653 s [racon::Polisher::initialize] aligning overlaps [===================>] 0.205850 s [racon::Polisher::initialize] aligning overlaps [====================] 0.221494 s [racon::Polisher::initialize] transformed data into windows 0.000478 s [racon::Polisher::polish] generating consensus [=> ] 0.020778 s [racon::Polisher::polish] generating consensus [==> ] 0.039355 s [racon::Polisher::polish] generating consensus [===> ] 0.059386 s [racon::Polisher::polish] generating consensus [====> ] 0.075460 s [racon::Polisher::polish] generating consensus [=====> ] 0.085778 s [racon::Polisher::polish] generating consensus [======> ] 0.095506 s [racon::Polisher::polish] generating consensus [=======> ] 0.107596 s [racon::Polisher::polish] generating consensus [========> ] 0.118860 s [racon::Polisher::polish] generating consensus [=========> ] 0.131012 s [racon::Polisher::polish] generating consensus [==========> ] 0.149266 s [racon::Polisher::polish] generating consensus [===========> ] 0.178523 s [racon::Polisher::polish] generating consensus [============> ] 0.207947 s [racon::Polisher::polish] generating consensus [=============> ] 0.246601 s [racon::Polisher::polish] generating consensus [==============> ] 0.286127 s [racon::Polisher::polish] generating consensus [===============> ] 0.321974 s [racon::Polisher::polish] generating consensus [================> ] 0.353476 s [racon::Polisher::polish] generating consensus [=================> ] 0.385219 s [racon::Polisher::polish] generating consensus [==================> ] 0.403074 s [racon::Polisher::polish] generating consensus [===================>] 0.423952 s [racon::Polisher::polish] generating consensus [====================] 0.536911 s [racon::Polisher::] total = 0.782878 s [ OK ] RaconPolishingTest.ConsensusWithoutQualities (793 ms) [ RUN ] RaconPolishingTest.ConsensusWithQualitiesAndAlignments [racon::Polisher::initialize] loaded target sequences 0.000409 s [racon::Polisher::initialize] loaded sequences 0.029517 s [racon::Polisher::initialize] loaded overlaps 0.017190 s [racon::Polisher::initialize] aligning overlaps [=> ] 0.002409 s [racon::Polisher::initialize] aligning overlaps [==> ] 0.002504 s [racon::Polisher::initialize] aligning overlaps [===> ] 0.002630 s [racon::Polisher::initialize] aligning overlaps [====> ] 0.002777 s [racon::Polisher::initialize] aligning overlaps [=====> ] 0.002793 s [racon::Polisher::initialize] aligning overlaps [======> ] 0.002869 s [racon::Polisher::initialize] aligning overlaps [=======> ] 0.002985 s [racon::Polisher::initialize] aligning overlaps [========> ] 0.003143 s [racon::Polisher::initialize] aligning overlaps [=========> ] 0.003214 s [racon::Polisher::initialize] aligning overlaps [==========> ] 0.003310 s [racon::Polisher::initialize] aligning overlaps [===========> ] 0.003415 s [racon::Polisher::initialize] aligning overlaps [============> ] 0.003581 s [racon::Polisher::initialize] aligning overlaps [=============> ] 0.003758 s [racon::Polisher::initialize] aligning overlaps [==============> ] 0.003961 s [racon::Polisher::initialize] aligning overlaps [===============> ] 0.004175 s [racon::Polisher::initialize] aligning overlaps [================> ] 0.004333 s [racon::Polisher::initialize] aligning overlaps [=================> ] 0.004347 s [racon::Polisher::initialize] aligning overlaps [==================> ] 0.004414 s [racon::Polisher::initialize] aligning overlaps [===================>] 0.004426 s [racon::Polisher::initialize] aligning overlaps [====================] 0.004440 s [racon::Polisher::initialize] transformed data into windows 0.001574 s [racon::Polisher::polish] generating consensus [=> ] 0.018802 s [racon::Polisher::polish] generating consensus [==> ] 0.034788 s [racon::Polisher::polish] generating consensus [===> ] 0.047840 s [racon::Polisher::polish] generating consensus [====> ] 0.058703 s [racon::Polisher::polish] generating consensus [=====> ] 0.066745 s [racon::Polisher::polish] generating consensus [======> ] 0.074075 s [racon::Polisher::polish] generating consensus [=======> ] 0.081911 s [racon::Polisher::polish] generating consensus [========> ] 0.090438 s [racon::Polisher::polish] generating consensus [=========> ] 0.100070 s [racon::Polisher::polish] generating consensus [==========> ] 0.113197 s [racon::Polisher::polish] generating consensus [===========> ] 0.133043 s [racon::Polisher::polish] generating consensus [============> ] 0.155816 s [racon::Polisher::polish] generating consensus [=============> ] 0.188654 s [racon::Polisher::polish] generating consensus [==============> ] 0.221379 s [racon::Polisher::polish] generating consensus [===============> ] 0.251299 s [racon::Polisher::polish] generating consensus [================> ] 0.270733 s [racon::Polisher::polish] generating consensus [=================> ] 0.296285 s [racon::Polisher::polish] generating consensus [==================> ] 0.310625 s [racon::Polisher::polish] generating consensus [===================>] 0.323955 s [racon::Polisher::polish] generating consensus [====================] 0.387166 s [racon::Polisher::] total = 0.452772 s [ OK ] RaconPolishingTest.ConsensusWithQualitiesAndAlignments (462 ms) [ RUN ] RaconPolishingTest.ConsensusWithoutQualitiesAndWithAlignments [racon::Polisher::initialize] loaded target sequences 0.000405 s [racon::Polisher::initialize] loaded sequences 0.012455 s [racon::Polisher::initialize] loaded overlaps 0.016857 s [racon::Polisher::initialize] aligning overlaps [=> ] 0.001851 s [racon::Polisher::initialize] aligning overlaps [==> ] 0.001946 s [racon::Polisher::initialize] aligning overlaps [===> ] 0.002075 s [racon::Polisher::initialize] aligning overlaps [====> ] 0.002197 s [racon::Polisher::initialize] aligning overlaps [=====> ] 0.002211 s [racon::Polisher::initialize] aligning overlaps [======> ] 0.002289 s [racon::Polisher::initialize] aligning overlaps [=======> ] 0.002441 s [racon::Polisher::initialize] aligning overlaps [========> ] 0.002614 s [racon::Polisher::initialize] aligning overlaps [=========> ] 0.002666 s [racon::Polisher::initialize] aligning overlaps [==========> ] 0.002738 s [racon::Polisher::initialize] aligning overlaps [===========> ] 0.002849 s [racon::Polisher::initialize] aligning overlaps [============> ] 0.003029 s [racon::Polisher::initialize] aligning overlaps [=============> ] 0.003108 s [racon::Polisher::initialize] aligning overlaps [==============> ] 0.003227 s [racon::Polisher::initialize] aligning overlaps [===============> ] 0.003355 s [racon::Polisher::initialize] aligning overlaps [================> ] 0.003517 s [racon::Polisher::initialize] aligning overlaps [=================> ] 0.003576 s [racon::Polisher::initialize] aligning overlaps [==================> ] 0.003665 s [racon::Polisher::initialize] aligning overlaps [===================>] 0.003732 s [racon::Polisher::initialize] aligning overlaps [====================] 0.003746 s [racon::Polisher::initialize] transformed data into windows 0.000445 s [racon::Polisher::polish] generating consensus [=> ] 0.018663 s [racon::Polisher::polish] generating consensus [==> ] 0.036551 s [racon::Polisher::polish] generating consensus [===> ] 0.055471 s [racon::Polisher::polish] generating consensus [====> ] 0.070247 s [racon::Polisher::polish] generating consensus [=====> ] 0.079071 s [racon::Polisher::polish] generating consensus [======> ] 0.086240 s [racon::Polisher::polish] generating consensus [=======> ] 0.096246 s [racon::Polisher::polish] generating consensus [========> ] 0.107586 s [racon::Polisher::polish] generating consensus [=========> ] 0.119465 s [racon::Polisher::polish] generating consensus [==========> ] 0.137734 s [racon::Polisher::polish] generating consensus [===========> ] 0.160691 s [racon::Polisher::polish] generating consensus [============> ] 0.188752 s [racon::Polisher::polish] generating consensus [=============> ] 0.231479 s [racon::Polisher::polish] generating consensus [==============> ] 0.263485 s [racon::Polisher::polish] generating consensus [===============> ] 0.295829 s [racon::Polisher::polish] generating consensus [================> ] 0.326166 s [racon::Polisher::polish] generating consensus [=================> ] 0.357711 s [racon::Polisher::polish] generating consensus [==================> ] 0.373291 s [racon::Polisher::polish] generating consensus [===================>] 0.390699 s [racon::Polisher::polish] generating consensus [====================] 0.487061 s [racon::Polisher::] total = 0.528857 s [ OK ] RaconPolishingTest.ConsensusWithoutQualitiesAndWithAlignments (532 ms) [ RUN ] RaconPolishingTest.ConsensusWithQualitiesLargerWindow [racon::Polisher::initialize] loaded target sequences 0.000429 s [racon::Polisher::initialize] loaded sequences 0.029561 s [racon::Polisher::initialize] loaded overlaps 0.000323 s [racon::Polisher::initialize] aligning overlaps [=> ] 0.018583 s [racon::Polisher::initialize] aligning overlaps [==> ] 0.032852 s [racon::Polisher::initialize] aligning overlaps [===> ] 0.043148 s [racon::Polisher::initialize] aligning overlaps [====> ] 0.054797 s [racon::Polisher::initialize] aligning overlaps [=====> ] 0.062832 s [racon::Polisher::initialize] aligning overlaps [======> ] 0.066973 s [racon::Polisher::initialize] aligning overlaps [=======> ] 0.090142 s [racon::Polisher::initialize] aligning overlaps [========> ] 0.101815 s [racon::Polisher::initialize] aligning overlaps [=========> ] 0.111146 s [racon::Polisher::initialize] aligning overlaps [==========> ] 0.119331 s [racon::Polisher::initialize] aligning overlaps [===========> ] 0.130737 s [racon::Polisher::initialize] aligning overlaps [============> ] 0.140667 s [racon::Polisher::initialize] aligning overlaps [=============> ] 0.151477 s [racon::Polisher::initialize] aligning overlaps [==============> ] 0.156980 s [racon::Polisher::initialize] aligning overlaps [===============> ] 0.164396 s [racon::Polisher::initialize] aligning overlaps [================> ] 0.179438 s [racon::Polisher::initialize] aligning overlaps [=================> ] 0.184905 s [racon::Polisher::initialize] aligning overlaps [==================> ] 0.197436 s [racon::Polisher::initialize] aligning overlaps [===================>] 0.213295 s [racon::Polisher::initialize] aligning overlaps [====================] 0.221899 s [racon::Polisher::initialize] transformed data into windows 0.001556 s [racon::Polisher::polish] generating consensus [=> ] 0.058380 s [racon::Polisher::polish] generating consensus [==> ] 0.058413 s [racon::Polisher::polish] generating consensus [===> ] 0.109802 s [racon::Polisher::polish] generating consensus [====> ] 0.109850 s [racon::Polisher::polish] generating consensus [=====> ] 0.131869 s [racon::Polisher::polish] generating consensus [======> ] 0.131901 s [racon::Polisher::polish] generating consensus [=======> ] 0.157513 s [racon::Polisher::polish] generating consensus [========> ] 0.157567 s [racon::Polisher::polish] generating consensus [=========> ] 0.181796 s [racon::Polisher::polish] generating consensus [==========> ] 0.227925 s [racon::Polisher::polish] generating consensus [===========> ] 0.247490 s [racon::Polisher::polish] generating consensus [============> ] 0.333574 s [racon::Polisher::polish] generating consensus [=============> ] 0.349025 s [racon::Polisher::polish] generating consensus [==============> ] 0.435291 s [racon::Polisher::polish] generating consensus [===============> ] 0.436415 s [racon::Polisher::polish] generating consensus [================> ] 0.492541 s [racon::Polisher::polish] generating consensus [=================> ] 0.508689 s [racon::Polisher::polish] generating consensus [==================> ] 0.538413 s [racon::Polisher::polish] generating consensus [===================>] 0.556655 s [racon::Polisher::polish] generating consensus [====================] 0.676411 s [racon::Polisher::] total = 0.940918 s [ OK ] RaconPolishingTest.ConsensusWithQualitiesLargerWindow (969 ms) [ RUN ] RaconPolishingTest.ConsensusWithQualitiesEditDistance [racon::Polisher::initialize] loaded target sequences 0.000398 s [racon::Polisher::initialize] loaded sequences 0.029590 s [racon::Polisher::initialize] loaded overlaps 0.000271 s [racon::Polisher::initialize] aligning overlaps [=> ] 0.017537 s [racon::Polisher::initialize] aligning overlaps [==> ] 0.034558 s [racon::Polisher::initialize] aligning overlaps [===> ] 0.042778 s [racon::Polisher::initialize] aligning overlaps [====> ] 0.052765 s [racon::Polisher::initialize] aligning overlaps [=====> ] 0.059762 s [racon::Polisher::initialize] aligning overlaps [======> ] 0.064419 s [racon::Polisher::initialize] aligning overlaps [=======> ] 0.081310 s [racon::Polisher::initialize] aligning overlaps [========> ] 0.097223 s [racon::Polisher::initialize] aligning overlaps [=========> ] 0.102021 s [racon::Polisher::initialize] aligning overlaps [==========> ] 0.110246 s [racon::Polisher::initialize] aligning overlaps [===========> ] 0.121577 s [racon::Polisher::initialize] aligning overlaps [============> ] 0.135421 s [racon::Polisher::initialize] aligning overlaps [=============> ] 0.142343 s [racon::Polisher::initialize] aligning overlaps [==============> ] 0.151943 s [racon::Polisher::initialize] aligning overlaps [===============> ] 0.165265 s [racon::Polisher::initialize] aligning overlaps [================> ] 0.187778 s [racon::Polisher::initialize] aligning overlaps [=================> ] 0.193242 s [racon::Polisher::initialize] aligning overlaps [==================> ] 0.202096 s [racon::Polisher::initialize] aligning overlaps [===================>] 0.211845 s [racon::Polisher::initialize] aligning overlaps [====================] 0.219889 s [racon::Polisher::initialize] transformed data into windows 0.001714 s [racon::Polisher::polish] generating consensus [=> ] 0.017540 s [racon::Polisher::polish] generating consensus [==> ] 0.031984 s [racon::Polisher::polish] generating consensus [===> ] 0.045011 s [racon::Polisher::polish] generating consensus [====> ] 0.056040 s [racon::Polisher::polish] generating consensus [=====> ] 0.063295 s [racon::Polisher::polish] generating consensus [======> ] 0.070926 s [racon::Polisher::polish] generating consensus [=======> ] 0.078264 s [racon::Polisher::polish] generating consensus [========> ] 0.086770 s [racon::Polisher::polish] generating consensus [=========> ] 0.097376 s [racon::Polisher::polish] generating consensus [==========> ] 0.108857 s [racon::Polisher::polish] generating consensus [===========> ] 0.128478 s [racon::Polisher::polish] generating consensus [============> ] 0.152701 s [racon::Polisher::polish] generating consensus [=============> ] 0.184688 s [racon::Polisher::polish] generating consensus [==============> ] 0.215405 s [racon::Polisher::polish] generating consensus [===============> ] 0.238463 s [racon::Polisher::polish] generating consensus [================> ] 0.254407 s [racon::Polisher::polish] generating consensus [=================> ] 0.276065 s [racon::Polisher::polish] generating consensus [==================> ] 0.288212 s [racon::Polisher::polish] generating consensus [===================>] 0.304849 s [racon::Polisher::polish] generating consensus [====================] 0.374733 s [racon::Polisher::] total = 0.636978 s [ OK ] RaconPolishingTest.ConsensusWithQualitiesEditDistance (640 ms) [ RUN ] RaconPolishingTest.FragmentCorrectionWithQualities [racon::Polisher::initialize] loaded target sequences 0.029531 s [racon::Polisher::initialize] loaded sequences 0.029502 s [racon::Polisher::initialize] loaded overlaps 0.006966 s [racon::Polisher::initialize] aligning overlaps [=> ] 0.019026 s [racon::Polisher::initialize] aligning overlaps [==> ] 0.033422 s [racon::Polisher::initialize] aligning overlaps [===> ] 0.038872 s [racon::Polisher::initialize] aligning overlaps [====> ] 0.048510 s [racon::Polisher::initialize] aligning overlaps [=====> ] 0.057636 s [racon::Polisher::initialize] aligning overlaps [======> ] 0.067228 s [racon::Polisher::initialize] aligning overlaps [=======> ] 0.083299 s [racon::Polisher::initialize] aligning overlaps [========> ] 0.092746 s [racon::Polisher::initialize] aligning overlaps [=========> ] 0.107266 s [racon::Polisher::initialize] aligning overlaps [==========> ] 0.119059 s [racon::Polisher::initialize] aligning overlaps [===========> ] 0.131835 s [racon::Polisher::initialize] aligning overlaps [============> ] 0.151595 s [racon::Polisher::initialize] aligning overlaps [=============> ] 0.165303 s [racon::Polisher::initialize] aligning overlaps [==============> ] 0.181273 s [racon::Polisher::initialize] aligning overlaps [===============> ] 0.191929 s [racon::Polisher::initialize] aligning overlaps [================> ] 0.209540 s [racon::Polisher::initialize] aligning overlaps [=================> ] 0.220083 s [racon::Polisher::initialize] aligning overlaps [==================> ] 0.228705 s [racon::Polisher::initialize] aligning overlaps [===================>] 0.236797 s [racon::Polisher::initialize] aligning overlaps [====================] 0.251745 s [racon::Polisher::initialize] transformed data into windows 0.002793 s [racon::Polisher::polish] generating consensus [=> ] 0.019120 s [racon::Polisher::polish] generating consensus [==> ] 0.033679 s [racon::Polisher::polish] generating consensus [===> ] 0.048730 s [racon::Polisher::polish] generating consensus [====> ] 0.049035 s [racon::Polisher::polish] generating consensus [=====> ] 0.059535 s [racon::Polisher::polish] generating consensus [======> ] 0.066214 s [racon::Polisher::polish] generating consensus [=======> ] 0.076446 s [racon::Polisher::polish] generating consensus [========> ] 0.077185 s [racon::Polisher::polish] generating consensus [=========> ] 0.097061 s [racon::Polisher::polish] generating consensus [==========> ] 0.106509 s [racon::Polisher::polish] generating consensus [===========> ] 0.114952 s [racon::Polisher::polish] generating consensus [============> ] 0.117882 s [racon::Polisher::polish] generating consensus [=============> ] 0.127326 s [racon::Polisher::polish] generating consensus [==============> ] 0.127568 s [racon::Polisher::polish] generating consensus [===============> ] 0.149260 s [racon::Polisher::polish] generating consensus [================> ] 0.149571 s [racon::Polisher::polish] generating consensus [=================> ] 0.188207 s [racon::Polisher::polish] generating consensus [==================> ] 0.202448 s [racon::Polisher::polish] generating consensus [===================>] 0.216593 s [racon::Polisher::polish] generating consensus [====================] 0.221765 s [racon::Polisher::] total = 0.542696 s [ OK ] RaconPolishingTest.FragmentCorrectionWithQualities (545 ms) [ RUN ] RaconPolishingTest.FragmentCorrectionWithQualitiesFull [racon::Polisher::initialize] loaded target sequences 0.029411 s [racon::Polisher::initialize] loaded sequences 0.029473 s [racon::Polisher::initialize] loaded overlaps 0.006635 s [racon::Polisher::initialize] aligning overlaps [=> ] 0.280842 s [racon::Polisher::initialize] aligning overlaps [==> ] 0.464357 s [racon::Polisher::initialize] aligning overlaps [===> ] 0.641759 s [racon::Polisher::initialize] aligning overlaps [====> ] 0.890481 s [racon::Polisher::initialize] aligning overlaps [=====> ] 1.109281 s [racon::Polisher::initialize] aligning overlaps [======> ] 1.262114 s [racon::Polisher::initialize] aligning overlaps [=======> ] 1.466833 s [racon::Polisher::initialize] aligning overlaps [========> ] 1.727696 s [racon::Polisher::initialize] aligning overlaps [=========> ] 1.969643 s [racon::Polisher::initialize] aligning overlaps [==========> ] 2.211619 s [racon::Polisher::initialize] aligning overlaps [===========> ] 2.398156 s [racon::Polisher::initialize] aligning overlaps [============> ] 2.662957 s [racon::Polisher::initialize] aligning overlaps [=============> ] 2.931241 s [racon::Polisher::initialize] aligning overlaps [==============> ] 3.152162 s [racon::Polisher::initialize] aligning overlaps [===============> ] 3.460114 s [racon::Polisher::initialize] aligning overlaps [================> ] 3.740976 s [racon::Polisher::initialize] aligning overlaps [=================> ] 3.988590 s [racon::Polisher::initialize] aligning overlaps [==================> ] 4.255838 s [racon::Polisher::initialize] aligning overlaps [===================>] 4.534802 s [racon::Polisher::initialize] aligning overlaps [====================] 4.782114 s [racon::Polisher::initialize] transformed data into windows 0.044294 s [racon::Polisher::polish] generating consensus [=> ] 0.711730 s [racon::Polisher::polish] generating consensus [==> ] 1.242784 s [racon::Polisher::polish] generating consensus [===> ] 1.776189 s [racon::Polisher::polish] generating consensus [====> ] 2.213220 s [racon::Polisher::polish] generating consensus [=====> ] 2.731735 s [racon::Polisher::polish] generating consensus [======> ] 3.297336 s [racon::Polisher::polish] generating consensus [=======> ] 3.880511 s [racon::Polisher::polish] generating consensus [========> ] 4.309765 s [racon::Polisher::polish] generating consensus [=========> ] 4.864222 s [racon::Polisher::polish] generating consensus [==========> ] 5.510802 s [racon::Polisher::polish] generating consensus [===========> ] 6.061480 s [racon::Polisher::polish] generating consensus [============> ] 6.641800 s [racon::Polisher::polish] generating consensus [=============> ] 7.142680 s [racon::Polisher::polish] generating consensus [==============> ] 7.686858 s [racon::Polisher::polish] generating consensus [===============> ] 8.275534 s [racon::Polisher::polish] generating consensus [================> ] 8.596346 s [racon::Polisher::polish] generating consensus [=================> ] 9.253130 s [racon::Polisher::polish] generating consensus [==================> ] 9.869319 s [racon::Polisher::polish] generating consensus [===================>] 10.460869 s [racon::Polisher::polish] generating consensus [====================] 10.883323 s [racon::Polisher::] total = 15.778079 s [ OK ] RaconPolishingTest.FragmentCorrectionWithQualitiesFull (15781 ms) [ RUN ] RaconPolishingTest.FragmentCorrectionWithoutQualitiesFull [racon::Polisher::initialize] loaded target sequences 0.012607 s [racon::Polisher::initialize] loaded sequences 0.012562 s [racon::Polisher::initialize] loaded overlaps 0.006643 s [racon::Polisher::initialize] aligning overlaps [=> ] 0.279647 s [racon::Polisher::initialize] aligning overlaps [==> ] 0.463320 s [racon::Polisher::initialize] aligning overlaps [===> ] 0.636285 s [racon::Polisher::initialize] aligning overlaps [====> ] 0.882161 s [racon::Polisher::initialize] aligning overlaps [=====> ] 1.096275 s [racon::Polisher::initialize] aligning overlaps [======> ] 1.246897 s [racon::Polisher::initialize] aligning overlaps [=======> ] 1.449765 s [racon::Polisher::initialize] aligning overlaps [========> ] 1.710054 s [racon::Polisher::initialize] aligning overlaps [=========> ] 1.949843 s [racon::Polisher::initialize] aligning overlaps [==========> ] 2.191145 s [racon::Polisher::initialize] aligning overlaps [===========> ] 2.377113 s [racon::Polisher::initialize] aligning overlaps [============> ] 2.640715 s [racon::Polisher::initialize] aligning overlaps [=============> ] 2.908512 s [racon::Polisher::initialize] aligning overlaps [==============> ] 3.139679 s [racon::Polisher::initialize] aligning overlaps [===============> ] 3.436311 s [racon::Polisher::initialize] aligning overlaps [================> ] 3.712937 s [racon::Polisher::initialize] aligning overlaps [=================> ] 3.956514 s [racon::Polisher::initialize] aligning overlaps [==================> ] 4.238985 s [racon::Polisher::initialize] aligning overlaps [===================>] 4.540698 s [racon::Polisher::initialize] aligning overlaps [====================] 4.769889 s [racon::Polisher::initialize] transformed data into windows 0.011620 s [racon::Polisher::polish] generating consensus [=> ] 0.964401 s [racon::Polisher::polish] generating consensus [==> ] 1.668779 s [racon::Polisher::polish] generating consensus [===> ] 2.399061 s [racon::Polisher::polish] generating consensus [====> ] 2.950209 s [racon::Polisher::polish] generating consensus [=====> ] 3.635767 s [racon::Polisher::polish] generating consensus [======> ] 4.383669 s [racon::Polisher::polish] generating consensus [=======> ] 5.177067 s [racon::Polisher::polish] generating consensus [========> ] 5.750842 s [racon::Polisher::polish] generating consensus [=========> ] 6.507945 s [racon::Polisher::polish] generating consensus [==========> ] 7.379763 s [racon::Polisher::polish] generating consensus [===========> ] 8.113958 s [racon::Polisher::polish] generating consensus [============> ] 8.902229 s [racon::Polisher::polish] generating consensus [=============> ] 9.630534 s [racon::Polisher::polish] generating consensus [==============> ] 10.377331 s [racon::Polisher::polish] generating consensus [===============> ] 11.134449 s [racon::Polisher::polish] generating consensus [================> ] 11.540010 s [racon::Polisher::polish] generating consensus [=================> ] 12.527551 s [racon::Polisher::polish] generating consensus [==================> ] 13.427945 s [racon::Polisher::polish] generating consensus [===================>] 14.247268 s [racon::Polisher::polish] generating consensus [====================] 14.758414 s [racon::Polisher::] total = 19.573647 s [ OK ] RaconPolishingTest.FragmentCorrectionWithoutQualitiesFull (19577 ms) [ RUN ] RaconPolishingTest.FragmentCorrectionWithQualitiesFullMhap [racon::Polisher::initialize] loaded target sequences 0.029506 s [racon::Polisher::initialize] loaded sequences 0.029606 s [racon::Polisher::initialize] loaded overlaps 0.006640 s [racon::Polisher::initialize] aligning overlaps [=> ] 0.293377 s [racon::Polisher::initialize] aligning overlaps [==> ] 0.479548 s [racon::Polisher::initialize] aligning overlaps [===> ] 0.653647 s [racon::Polisher::initialize] aligning overlaps [====> ] 0.893622 s [racon::Polisher::initialize] aligning overlaps [=====> ] 1.097442 s [racon::Polisher::initialize] aligning overlaps [======> ] 1.247368 s [racon::Polisher::initialize] aligning overlaps [=======> ] 1.450798 s [racon::Polisher::initialize] aligning overlaps [========> ] 1.711466 s [racon::Polisher::initialize] aligning overlaps [=========> ] 1.963866 s [racon::Polisher::initialize] aligning overlaps [==========> ] 2.193032 s [racon::Polisher::initialize] aligning overlaps [===========> ] 2.379046 s [racon::Polisher::initialize] aligning overlaps [============> ] 2.642837 s [racon::Polisher::initialize] aligning overlaps [=============> ] 2.936898 s [racon::Polisher::initialize] aligning overlaps [==============> ] 3.187765 s [racon::Polisher::initialize] aligning overlaps [===============> ] 3.487491 s [racon::Polisher::initialize] aligning overlaps [================> ] 3.765297 s [racon::Polisher::initialize] aligning overlaps [=================> ] 3.999687 s [racon::Polisher::initialize] aligning overlaps [==================> ] 4.297791 s [racon::Polisher::initialize] aligning overlaps [===================>] 4.601998 s [racon::Polisher::initialize] aligning overlaps [====================] 4.795371 s [racon::Polisher::initialize] transformed data into windows 0.043492 s [racon::Polisher::polish] generating consensus [=> ] 0.696711 s [racon::Polisher::polish] generating consensus [==> ] 1.221182 s [racon::Polisher::polish] generating consensus [===> ] 1.787499 s [racon::Polisher::polish] generating consensus [====> ] 2.243274 s [racon::Polisher::polish] generating consensus [=====> ] 2.762438 s [racon::Polisher::polish] generating consensus [======> ] 3.351003 s [racon::Polisher::polish] generating consensus [=======> ] 3.940606 s [racon::Polisher::polish] generating consensus [========> ] 4.371424 s [racon::Polisher::polish] generating consensus [=========> ] 4.928877 s [racon::Polisher::polish] generating consensus [==========> ] 5.579394 s [racon::Polisher::polish] generating consensus [===========> ] 6.132935 s [racon::Polisher::polish] generating consensus [============> ] 6.715715 s [racon::Polisher::polish] generating consensus [=============> ] 7.229407 s [racon::Polisher::polish] generating consensus [==============> ] 7.782202 s [racon::Polisher::polish] generating consensus [===============> ] 8.387635 s [racon::Polisher::polish] generating consensus [================> ] 8.716125 s [racon::Polisher::polish] generating consensus [=================> ] 9.394037 s [racon::Polisher::polish] generating consensus [==================> ] 10.022487 s [racon::Polisher::polish] generating consensus [===================>] 10.622282 s [racon::Polisher::polish] generating consensus [====================] 10.940844 s [racon::Polisher::] total = 15.847809 s [ OK ] RaconPolishingTest.FragmentCorrectionWithQualitiesFullMhap (15851 ms) [----------] 10 tests from RaconPolishingTest (55831 ms total) [----------] Global test environment tear-down [==========] 15 tests from 2 test suites ran. (55841 ms total) [ PASSED ] 15 tests. make[1]: Leaving directory '/build/reproducible-path/racon-1.5.0' create-stamp debian/debhelper-build-stamp dh_testroot -O--buildsystem=cmake dh_prep -O--buildsystem=cmake dh_auto_install --destdir=debian/racon/ -O--buildsystem=cmake cd obj-x86_64-linux-gnu && make -j42 install DESTDIR=/build/reproducible-path/racon-1.5.0/debian/racon AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/reproducible-path/racon-1.5.0/obj-x86_64-linux-gnu' /usr/bin/cmake -S/build/reproducible-path/racon-1.5.0 -B/build/reproducible-path/racon-1.5.0/obj-x86_64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 preinstall make[2]: Entering directory '/build/reproducible-path/racon-1.5.0/obj-x86_64-linux-gnu' make[2]: Nothing to be done for 'preinstall'. make[2]: Leaving directory '/build/reproducible-path/racon-1.5.0/obj-x86_64-linux-gnu' Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "None" -- Installing: /build/reproducible-path/racon-1.5.0/debian/racon/usr/bin/racon make[1]: Leaving directory '/build/reproducible-path/racon-1.5.0/obj-x86_64-linux-gnu' dh_install -O--buildsystem=cmake dh_installdocs -O--buildsystem=cmake dh_installchangelogs -O--buildsystem=cmake dh_installexamples -O--buildsystem=cmake dh_installman -O--buildsystem=cmake dh_installsystemduser -O--buildsystem=cmake dh_lintian -O--buildsystem=cmake dh_perl -O--buildsystem=cmake dh_link -O--buildsystem=cmake dh_strip_nondeterminism -O--buildsystem=cmake dh_compress -O--buildsystem=cmake dh_fixperms -O--buildsystem=cmake dh_missing -O--buildsystem=cmake dh_dwz -a -O--buildsystem=cmake dh_strip -a -O--buildsystem=cmake dh_makeshlibs -a -O--buildsystem=cmake dh_shlibdeps -a -O--buildsystem=cmake dh_installdeb -O--buildsystem=cmake dh_gencontrol -O--buildsystem=cmake dh_md5sums -O--buildsystem=cmake dh_builddeb -O--buildsystem=cmake dpkg-deb: building package 'racon-dbgsym' in '../racon-dbgsym_1.5.0-3_amd64.deb'. dpkg-deb: building package 'racon' in '../racon_1.5.0-3_amd64.deb'. dpkg-genbuildinfo --build=binary -O../racon_1.5.0-3_amd64.buildinfo dpkg-genchanges --build=binary -O../racon_1.5.0-3_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/2967243 and its subdirectories I: Current time: Sun Jun 22 20:51:25 -12 2025 I: pbuilder-time-stamp: 1750668685 Tue May 21 02:28:26 UTC 2024 I: 1st build successful. Starting 2nd build on remote node ionos11-amd64.debian.net. Tue May 21 02:28:26 UTC 2024 I: Preparing to do remote build '2' on ionos11-amd64.debian.net. Tue May 21 02:32:23 UTC 2024 I: Deleting $TMPDIR on ionos11-amd64.debian.net. Tue May 21 02:32:23 UTC 2024 I: racon_1.5.0-3_amd64.changes: Format: 1.8 Date: Thu, 29 Sep 2022 14:39:55 +0200 Source: racon Binary: racon racon-dbgsym Architecture: amd64 Version: 1.5.0-3 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Andreas Tille Description: racon - consensus module for raw de novo DNA assembly of long uncorrected Changes: racon (1.5.0-3) unstable; urgency=medium . * Standards-Version: 4.6.1 (routine-update) * Drop patch making racon compatible to old libthread_pool Checksums-Sha1: d0d9e8beecd3e470d4fc3ec19926e91d47c94933 1006140 racon-dbgsym_1.5.0-3_amd64.deb e7e8f6bd71b5de5265b9af9ca63d9b8267daa21c 6500 racon_1.5.0-3_amd64.buildinfo 8e6e4e8ef1ddb5446a7372ffabf865838e9c9a90 3115368 racon_1.5.0-3_amd64.deb Checksums-Sha256: d61e3307067f286463317163c91e96993c64118c20918f3b84442813607d4dde 1006140 racon-dbgsym_1.5.0-3_amd64.deb d06ddd9d4384c0c8406e1ed4d62c5676d3585520930ed5a005314b86dee52c03 6500 racon_1.5.0-3_amd64.buildinfo 19d9210e14aa3c9135fd8f397c6d6c621a36a837b9c8b1caa6f9e067b1b38836 3115368 racon_1.5.0-3_amd64.deb Files: b5ef1d061b5e835df62570d10777cd09 1006140 debug optional racon-dbgsym_1.5.0-3_amd64.deb 9964491a9c2d1f8fb7c0c58d08756625 6500 science optional racon_1.5.0-3_amd64.buildinfo cce9eb8f6d7369c3061376350aa68f3f 3115368 science optional racon_1.5.0-3_amd64.deb Tue May 21 02:32:25 UTC 2024 I: diffoscope 266 will be used to compare the two builds: Running as unit: rb-diffoscope-amd64_8-21901.service # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.YCVQZTGV/racon_1.5.0-3.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.YCVQZTGV/racon_1.5.0-3.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.YCVQZTGV/racon_1.5.0-3.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.YCVQZTGV/b1/racon_1.5.0-3_amd64.changes /srv/reproducible-results/rbuild-debian/r-b-build.YCVQZTGV/b2/racon_1.5.0-3_amd64.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 0.418s) 0.418s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.058s) 0.058s 12 calls diffoscope.comparators.binary.FilesystemFile ## specialize (total time: 0.000s) 0.000s 1 call specialize Finished with result: success Main processes terminated with: code=exited/status=0 Service runtime: 762ms CPU time consumed: 762ms Tue May 21 02:32:26 UTC 2024 I: diffoscope 266 found no differences in the changes files, and a .buildinfo file also exists. Tue May 21 02:32:26 UTC 2024 I: racon from unstable built successfully and reproducibly on amd64. Tue May 21 02:32:27 UTC 2024 I: Submitting .buildinfo files to external archives: Tue May 21 02:32:27 UTC 2024 I: Submitting 8.0K b1/racon_1.5.0-3_amd64.buildinfo.asc Tue May 21 02:32:28 UTC 2024 I: Submitting 8.0K b2/racon_1.5.0-3_amd64.buildinfo.asc Tue May 21 02:32:29 UTC 2024 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Tue May 21 02:32:29 UTC 2024 I: Done submitting .buildinfo files. Tue May 21 02:32:29 UTC 2024 I: Removing signed racon_1.5.0-3_amd64.buildinfo.asc files: removed './b1/racon_1.5.0-3_amd64.buildinfo.asc' removed './b2/racon_1.5.0-3_amd64.buildinfo.asc'