Sun May 26 12:08:59 UTC 2024 I: starting to build python-anndata/unstable/amd64 on jenkins on '2024-05-26 12:08' Sun May 26 12:08:59 UTC 2024 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/amd64_2/7948/console.log Sun May 26 12:08:59 UTC 2024 I: Downloading source for unstable/python-anndata=0.10.6-1 --2024-05-26 12:08:59-- http://deb.debian.org/debian/pool/main/p/python-anndata/python-anndata_0.10.6-1.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2983 (2.9K) [text/prs.lines.tag] Saving to: ‘python-anndata_0.10.6-1.dsc’ 0K .. 100% 422M=0s 2024-05-26 12:08:59 (422 MB/s) - ‘python-anndata_0.10.6-1.dsc’ saved [2983/2983] Sun May 26 12:08:59 UTC 2024 I: python-anndata_0.10.6-1.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: python-anndata Binary: python3-anndata Architecture: all Version: 0.10.6-1 Maintainer: Debian Med Packaging Team Uploaders: Diane Trout , Steffen Moeller Homepage: https://github.com/theislab/anndata Standards-Version: 4.6.2 Vcs-Browser: https://salsa.debian.org/med-team/python-anndata Vcs-Git: https://salsa.debian.org/med-team/python-anndata.git Testsuite: autopkgtest Testsuite-Triggers: python3-all, python3-boltons, python3-dask, python3-distributed, python3-h5py, python3-importlib-metadata, python3-joblib, python3-matplotlib, python3-numba, python3-openpyxl, python3-pytest, python3-pytest-cov, python3-pytest-mock, python3-setuptools-scm, python3-sklearn, python3-xlrd, python3-zarr Build-Depends: dh-sequence-python3, python3-setuptools, python3-all, debhelper-compat (= 13), pybuild-plugin-pyproject, python3-distributed , python3-h5py, python3-importlib-metadata, python3-hatchling, python3-hatch-vcs, python3-natsort, python3-numpy, python3-pandas, python3-packaging, python3-scipy, python3-setuptools-scm, python3-pytest , python3-pytest-cov , python3-pytest-mock , python3-array-api-compat , python3-boltons , python3-joblib , python3-httpx , python3-openpyxl , python3-sklearn , python3-xlrd , python3-zarr , flit Package-List: python3-anndata deb python optional arch=all Checksums-Sha1: 9b2f78f923a02750f0ff97c7c3029ab3d46fb1f9 509188 python-anndata_0.10.6.orig.tar.gz d5d88f6e35ad732ef6ed35452053b6909dbe7baf 7852 python-anndata_0.10.6-1.debian.tar.xz Checksums-Sha256: 4cd8eebfaebc93bb88e9b1df07d658ad97766226fc480100f2162bec1f64599d 509188 python-anndata_0.10.6.orig.tar.gz ac60bd5cf94473cea9fbce1ba8da562d055a35bac58c4dc07e447da0129746f5 7852 python-anndata_0.10.6-1.debian.tar.xz Files: debd5a08277b7de55547c981fa94b27e 509188 python-anndata_0.10.6.orig.tar.gz 7965c6289c611f1e77a5fe7c1ba65b64 7852 python-anndata_0.10.6-1.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQIzBAEBCgAdFiEETQVcMeSBIEX5AQ11mQ04NnM013AFAmYGI3MACgkQmQ04NnM0 13Ag5A/+PNVBSWg2fX4ZOqakYXD0q7mij+boNkIG3gs5IVi/hGS8PWB0kpA5Qd91 Pf3rxfiwC6XIJLHYI59WUMY8MUmHk/JTXp386D+9gN+nfTPwAi2/mnGoj7ASuAE8 ZiyZoJDs6R/ZI+b7z6Hn4U5tobc8tzwnowJAjj8KY7dEVf+rDKuUDCz7IUkujJOh 0k0M6rF2dUH5+b5NCedmsOSy7giTVB7mqUD+SlBOgqrGWb+Kolx3Mdt2M743lu7u 6x9HYc6BpVVygJoMqlcmbRV8OAN+Xk6imL0Gji9YtPUB/slwYii1/pEosG7U0sYo eJJNHygRaNVoB6VHAkF4B8UCNryYHrCbqonVqV5pPmPYbicoeb6MQMCBqHSEaEox mJGIrFBBQ2RykIRc1XaiymXS8Zv8ENk2o78szguAzFSWGgBPQAkX+Svk55Cx7jPs kOkliSISV1XyHok4c1XbJM6Hbk1G/V0phzEAqlVEx7TmT89p4/tMzDFQQBg/wyfV Sq5dvqkyyntO/7YBoVF+Zm5k8ZsQ6eYiO21QMoTHBNMLdu0or9+pspc7/SV0LgpN p1gWiM9YUxyuGBQGmC2Q6/i0/F7/b+V+pQAlymxlhNnZjms1AMsZMNEWAz/s9r0K 67Uf1mvksBuRMk4CGmTnZOvUmRCBS2xX3BpOinwtiyNukYsFNIU= =PZ1D -----END PGP SIGNATURE----- Sun May 26 12:08:59 UTC 2024 I: Checking whether the package is not for us Sun May 26 12:08:59 UTC 2024 I: Starting 1st build on remote node ionos5-amd64.debian.net. Sun May 26 12:08:59 UTC 2024 I: Preparing to do remote build '1' on ionos5-amd64.debian.net. Sun May 26 12:18:30 UTC 2024 I: Deleting $TMPDIR on ionos5-amd64.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Sat Jun 28 06:32:00 -12 2025 I: pbuilder-time-stamp: 1751135520 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [python-anndata_0.10.6-1.dsc] I: copying [./python-anndata_0.10.6.orig.tar.gz] I: copying [./python-anndata_0.10.6-1.debian.tar.xz] I: Extracting source gpgv: Signature made Fri Mar 29 02:12:03 2024 gpgv: using RSA key 4D055C31E4812045F9010D75990D38367334D770 gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./python-anndata_0.10.6-1.dsc: no acceptable signature found dpkg-source: info: extracting python-anndata in python-anndata-0.10.6 dpkg-source: info: unpacking python-anndata_0.10.6.orig.tar.gz dpkg-source: info: unpacking python-anndata_0.10.6-1.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying 32bit_test_fail_skip dpkg-source: info: applying ignore_test_importing_scanpy.patch dpkg-source: info: applying ignore_numba_failures.patch dpkg-source: info: applying scanpy_not_finished_yet.patch dpkg-source: info: applying skip-awkward-tests.patch dpkg-source: info: applying skip-cupy-tests.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/1376825/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='amd64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=42 ' DISTRIBUTION='unstable' HOME='/root' HOST_ARCH='amd64' IFS=' ' INVOCATION_ID='def1beefc45047fcace5ae378058eef2' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='1376825' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.rukLTbN0/pbuilderrc_Tb12 --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.rukLTbN0/b1 --logfile b1/build.log python-anndata_0.10.6-1.dsc' SUDO_GID='110' SUDO_UID='105' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://213.165.73.152:3128' I: uname -a Linux ionos5-amd64 6.7.12+bpo-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.7.12-1~bpo12+1 (2024-05-06) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Jun 27 14:06 /bin -> usr/bin I: user script /srv/workspace/pbuilder/1376825/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: amd64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: dh-sequence-python3, python3-setuptools, python3-all, debhelper-compat (= 13), pybuild-plugin-pyproject, python3-distributed, python3-h5py, python3-importlib-metadata, python3-hatchling, python3-hatch-vcs, python3-natsort, python3-numpy, python3-pandas, python3-packaging, python3-scipy, python3-setuptools-scm, python3-pytest, python3-pytest-cov, python3-pytest-mock, python3-array-api-compat, python3-boltons, python3-joblib, python3-httpx, python3-openpyxl, python3-sklearn, python3-xlrd, python3-zarr, flit dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19718 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on dh-sequence-python3; however: Package dh-sequence-python3 is not installed. pbuilder-satisfydepends-dummy depends on python3-setuptools; however: Package python3-setuptools is not installed. pbuilder-satisfydepends-dummy depends on python3-all; however: Package python3-all is not installed. pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on pybuild-plugin-pyproject; however: Package pybuild-plugin-pyproject is not installed. pbuilder-satisfydepends-dummy depends on python3-distributed; however: Package python3-distributed is not installed. pbuilder-satisfydepends-dummy depends on python3-h5py; however: Package python3-h5py is not installed. pbuilder-satisfydepends-dummy depends on python3-importlib-metadata; however: Package python3-importlib-metadata is not installed. pbuilder-satisfydepends-dummy depends on python3-hatchling; however: Package python3-hatchling is not installed. pbuilder-satisfydepends-dummy depends on python3-hatch-vcs; however: Package python3-hatch-vcs is not installed. pbuilder-satisfydepends-dummy depends on python3-natsort; however: Package python3-natsort is not installed. pbuilder-satisfydepends-dummy depends on python3-numpy; however: Package python3-numpy is not installed. pbuilder-satisfydepends-dummy depends on python3-pandas; however: Package python3-pandas is not installed. pbuilder-satisfydepends-dummy depends on python3-packaging; however: Package python3-packaging is not installed. pbuilder-satisfydepends-dummy depends on python3-scipy; however: Package python3-scipy is not installed. pbuilder-satisfydepends-dummy depends on python3-setuptools-scm; however: Package python3-setuptools-scm is not installed. pbuilder-satisfydepends-dummy depends on python3-pytest; however: Package python3-pytest is not installed. pbuilder-satisfydepends-dummy depends on python3-pytest-cov; however: Package python3-pytest-cov is not installed. pbuilder-satisfydepends-dummy depends on python3-pytest-mock; however: Package python3-pytest-mock is not installed. pbuilder-satisfydepends-dummy depends on python3-array-api-compat; however: Package python3-array-api-compat is not installed. pbuilder-satisfydepends-dummy depends on python3-boltons; however: Package python3-boltons is not installed. pbuilder-satisfydepends-dummy depends on python3-joblib; however: Package python3-joblib is not installed. pbuilder-satisfydepends-dummy depends on python3-httpx; however: Package python3-httpx is not installed. pbuilder-satisfydepends-dummy depends on python3-openpyxl; however: Package python3-openpyxl is not installed. pbuilder-satisfydepends-dummy depends on python3-sklearn; however: Package python3-sklearn is not installed. pbuilder-satisfydepends-dummy depends on python3-xlrd; however: Package python3-xlrd is not installed. pbuilder-satisfydepends-dummy depends on python3-zarr; however: Package python3-zarr is not installed. pbuilder-satisfydepends-dummy depends on flit; however: Package flit is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} ca-certificates{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} docutils-common{a} dwz{a} file{a} flit{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libaec0{a} libarchive-zip-perl{a} libblas3{a} libblosc1{a} libbrotli1{a} libcom-err2{a} libcurl4t64{a} libdebhelper-perl{a} libelf1t64{a} libexpat1{a} libfile-stripnondeterminism-perl{a} libgfortran5{a} libgssapi-krb5-2{a} libhdf5-103-1t64{a} libhdf5-hl-100t64{a} libicu72{a} libjs-jquery{a} libjs-jquery-hotkeys{a} libjs-jquery-isonscreen{a} libjs-jquery-metadata{a} libjs-jquery-tablesorter{a} libjs-jquery-throttle-debounce{a} libjs-sphinxdoc{a} libjs-underscore{a} libjson-perl{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} liblapack3{a} liblbfgsb0{a} libldap-2.5-0{a} liblzf1{a} libmagic-mgc{a} libmagic1t64{a} libnghttp2-14{a} libpipeline1{a} libproc2-0{a} libpsl5t64{a} libpython3-stdlib{a} libpython3.11-minimal{a} libpython3.11-stdlib{a} libpython3.12-minimal{a} libpython3.12-stdlib{a} libreadline8t64{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libsnappy1v5{a} libssh2-1t64{a} libsz2{a} libtool{a} libuchardet0{a} libxml2{a} libxslt1.1{a} libyaml-0-2{a} m4{a} man-db{a} media-types{a} netbase{a} openssl{a} po-debconf{a} procps{a} pybuild-plugin-pyproject{a} python-babel-localedata{a} python3{a} python3-alabaster{a} python3-all{a} python3-anyio{a} python3-array-api-compat{a} python3-asciitree{a} python3-babel{a} python3-boltons{a} python3-bs4{a} python3-build{a} python3-certifi{a} python3-chardet{a} python3-charset-normalizer{a} python3-click{a} python3-cloudpickle{a} python3-colorama{a} python3-coverage{a} python3-dask{a} python3-dateutil{a} python3-decorator{a} python3-distributed{a} python3-distutils{a} python3-docutils{a} python3-et-xmlfile{a} python3-fasteners{a} python3-fsspec{a} python3-h11{a} python3-h5py{a} python3-h5py-serial{a} python3-hatch-vcs{a} python3-hatchling{a} python3-httpcore{a} python3-httpx{a} python3-idna{a} python3-imagesize{a} python3-importlib-metadata{a} python3-iniconfig{a} python3-installer{a} python3-jinja2{a} python3-joblib{a} python3-lib2to3{a} python3-locket{a} python3-lxml{a} python3-markdown-it{a} python3-markupsafe{a} python3-mdurl{a} python3-minimal{a} python3-monotonic{a} python3-more-itertools{a} python3-msgpack{a} python3-natsort{a} python3-numcodecs{a} python3-numpy{a} python3-openpyxl{a} python3-packaging{a} python3-pandas{a} python3-pandas-lib{a} python3-partd{a} python3-pathspec{a} python3-pkg-resources{a} python3-pluggy{a} python3-psutil{a} python3-pydata-sphinx-theme{a} python3-pygments{a} python3-pyproject-hooks{a} python3-pytest{a} python3-pytest-cov{a} python3-pytest-mock{a} python3-requests{a} python3-rich{a} python3-roman{a} python3-scipy{a} python3-setuptools{a} python3-setuptools-scm{a} python3-six{a} python3-sklearn{a} python3-sklearn-lib{a} python3-sniffio{a} python3-snowballstemmer{a} python3-sortedcontainers{a} python3-soupsieve{a} python3-sphinx{a} python3-sphinx-copybutton{a} python3-tblib{a} python3-threadpoolctl{a} python3-toml{a} python3-tomli-w{a} python3-toolz{a} python3-tornado{a} python3-trove-classifiers{a} python3-typing-extensions{a} python3-tz{a} python3-urllib3{a} python3-wheel{a} python3-xlrd{a} python3-yaml{a} python3-zarr{a} python3-zict{a} python3-zipp{a} python3.11{a} python3.11-minimal{a} python3.12{a} python3.12-minimal{a} readline-common{a} sensible-utils{a} sgml-base{a} sphinx-common{a} tzdata{a} xml-core{a} The following packages are RECOMMENDED but will NOT be installed: curl git javascript-common krb5-locales libarchive-cpio-perl libjson-xs-perl libldap-common libltdl-dev libmail-sendmail-perl libpaper-utils libsasl2-modules lynx psmisc publicsuffix python3-blosc python3-bottleneck python3-cssselect python3-dropbox python3-fusepy python3-html5lib python3-libarchive-c python3-matplotlib python3-numba python3-numexpr python3-odf python3-paramiko python3-pil python3-pygit2 python3-simplejson python3-tables python3-zfpy python3-zmq wget 0 packages upgraded, 192 newly installed, 0 to remove and 0 not upgraded. Need to get 108 MB of archives. After unpacking 522 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian unstable/main amd64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [326 kB] Get: 2 http://deb.debian.org/debian unstable/main amd64 libjs-jquery-hotkeys all 0~20130707+git2d51e3a9+dfsg-2.1 [11.5 kB] Get: 3 http://deb.debian.org/debian unstable/main amd64 libpython3.11-minimal amd64 3.11.9-1 [817 kB] Get: 4 http://deb.debian.org/debian unstable/main amd64 libexpat1 amd64 2.6.2-1 [103 kB] Get: 5 http://deb.debian.org/debian unstable/main amd64 python3.11-minimal amd64 3.11.9-1 [1879 kB] Get: 6 http://deb.debian.org/debian unstable/main amd64 python3-minimal amd64 3.11.8-1 [26.3 kB] Get: 7 http://deb.debian.org/debian unstable/main amd64 media-types all 10.1.0 [26.9 kB] Get: 8 http://deb.debian.org/debian unstable/main amd64 netbase all 6.4 [12.8 kB] Get: 9 http://deb.debian.org/debian unstable/main amd64 tzdata all 2024a-4 [255 kB] Get: 10 http://deb.debian.org/debian unstable/main amd64 readline-common all 8.2-4 [69.3 kB] Get: 11 http://deb.debian.org/debian unstable/main amd64 libreadline8t64 amd64 8.2-4 [167 kB] Get: 12 http://deb.debian.org/debian unstable/main amd64 libpython3.11-stdlib amd64 3.11.9-1 [1792 kB] Get: 13 http://deb.debian.org/debian unstable/main amd64 python3.11 amd64 3.11.9-1 [602 kB] Get: 14 http://deb.debian.org/debian unstable/main amd64 libpython3-stdlib amd64 3.11.8-1 [9332 B] Get: 15 http://deb.debian.org/debian unstable/main amd64 python3 amd64 3.11.8-1 [27.4 kB] Get: 16 http://deb.debian.org/debian unstable/main amd64 libpython3.12-minimal amd64 3.12.3-1 [809 kB] Get: 17 http://deb.debian.org/debian unstable/main amd64 python3.12-minimal amd64 3.12.3-1 [2139 kB] Get: 18 http://deb.debian.org/debian unstable/main amd64 sgml-base all 1.31 [15.4 kB] Get: 19 http://deb.debian.org/debian unstable/main amd64 libproc2-0 amd64 2:4.0.4-4 [64.6 kB] Get: 20 http://deb.debian.org/debian unstable/main amd64 procps amd64 2:4.0.4-4 [880 kB] Get: 21 http://deb.debian.org/debian unstable/main amd64 sensible-utils all 0.0.22 [22.4 kB] Get: 22 http://deb.debian.org/debian unstable/main amd64 openssl amd64 3.2.1-3 [1360 kB] Get: 23 http://deb.debian.org/debian unstable/main amd64 ca-certificates all 20240203 [158 kB] Get: 24 http://deb.debian.org/debian unstable/main amd64 libmagic-mgc amd64 1:5.45-3 [314 kB] Get: 25 http://deb.debian.org/debian unstable/main amd64 libmagic1t64 amd64 1:5.45-3 [105 kB] Get: 26 http://deb.debian.org/debian unstable/main amd64 file amd64 1:5.45-3 [42.9 kB] Get: 27 http://deb.debian.org/debian unstable/main amd64 gettext-base amd64 0.21-14+b1 [161 kB] Get: 28 http://deb.debian.org/debian unstable/main amd64 libuchardet0 amd64 0.0.8-1+b1 [68.8 kB] Get: 29 http://deb.debian.org/debian unstable/main amd64 groff-base amd64 1.23.0-4 [1180 kB] Get: 30 http://deb.debian.org/debian unstable/main amd64 bsdextrautils amd64 2.40.1-1 [94.1 kB] Get: 31 http://deb.debian.org/debian unstable/main amd64 libpipeline1 amd64 1.5.7-2 [38.0 kB] Get: 32 http://deb.debian.org/debian unstable/main amd64 man-db amd64 2.12.1-1 [1411 kB] Get: 33 http://deb.debian.org/debian unstable/main amd64 m4 amd64 1.4.19-4 [287 kB] Get: 34 http://deb.debian.org/debian unstable/main amd64 autoconf all 2.71-3 [332 kB] Get: 35 http://deb.debian.org/debian unstable/main amd64 autotools-dev all 20220109.1 [51.6 kB] Get: 36 http://deb.debian.org/debian unstable/main amd64 automake all 1:1.16.5-1.3 [823 kB] Get: 37 http://deb.debian.org/debian unstable/main amd64 autopoint all 0.21-14 [496 kB] Get: 38 http://deb.debian.org/debian unstable/main amd64 libdebhelper-perl all 13.15.3 [88.0 kB] Get: 39 http://deb.debian.org/debian unstable/main amd64 libtool all 2.4.7-7 [517 kB] Get: 40 http://deb.debian.org/debian unstable/main amd64 dh-autoreconf all 20 [17.1 kB] Get: 41 http://deb.debian.org/debian unstable/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 42 http://deb.debian.org/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB] Get: 43 http://deb.debian.org/debian unstable/main amd64 dh-strip-nondeterminism all 1.14.0-1 [8448 B] Get: 44 http://deb.debian.org/debian unstable/main amd64 libelf1t64 amd64 0.191-1+b1 [189 kB] Get: 45 http://deb.debian.org/debian unstable/main amd64 dwz amd64 0.15-1+b1 [110 kB] Get: 46 http://deb.debian.org/debian unstable/main amd64 libicu72 amd64 72.1-4+b1 [9395 kB] Get: 47 http://deb.debian.org/debian unstable/main amd64 libxml2 amd64 2.12.7+dfsg-2 [670 kB] Get: 48 http://deb.debian.org/debian unstable/main amd64 gettext amd64 0.21-14+b1 [1301 kB] Get: 49 http://deb.debian.org/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 50 http://deb.debian.org/debian unstable/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 51 http://deb.debian.org/debian unstable/main amd64 debhelper all 13.15.3 [901 kB] Get: 52 http://deb.debian.org/debian unstable/main amd64 python3-pkg-resources all 68.1.2-2 [241 kB] Get: 53 http://deb.debian.org/debian unstable/main amd64 python3-lib2to3 all 3.12.3-3.1 [77.7 kB] Get: 54 http://deb.debian.org/debian unstable/main amd64 python3-distutils all 3.12.3-3.1 [131 kB] Get: 55 http://deb.debian.org/debian unstable/main amd64 python3-setuptools all 68.1.2-2 [468 kB] Get: 56 http://deb.debian.org/debian unstable/main amd64 dh-python all 6.20240422 [107 kB] Get: 57 http://deb.debian.org/debian unstable/main amd64 xml-core all 0.19 [20.1 kB] Get: 58 http://deb.debian.org/debian unstable/main amd64 docutils-common all 0.20.1+dfsg-3 [128 kB] Get: 59 http://deb.debian.org/debian unstable/main amd64 python3-roman all 3.3-3 [9880 B] Get: 60 http://deb.debian.org/debian unstable/main amd64 python3-docutils all 0.20.1+dfsg-3 [389 kB] Get: 61 http://deb.debian.org/debian unstable/main amd64 python3-certifi all 2023.11.17-1 [155 kB] Get: 62 http://deb.debian.org/debian unstable/main amd64 python3-charset-normalizer all 3.3.2-1 [51.6 kB] Get: 63 http://deb.debian.org/debian unstable/main amd64 python3-idna all 3.6-2 [37.0 kB] Get: 64 http://deb.debian.org/debian unstable/main amd64 python3-six all 1.16.0-6 [16.3 kB] Get: 65 http://deb.debian.org/debian unstable/main amd64 python3-urllib3 all 1.26.18-2 [116 kB] Get: 66 http://deb.debian.org/debian unstable/main amd64 python3-chardet all 5.2.0+dfsg-1 [107 kB] Get: 67 http://deb.debian.org/debian unstable/main amd64 python3-requests all 2.31.0+dfsg-2 [68.7 kB] Get: 68 http://deb.debian.org/debian unstable/main amd64 python3-tomli-w all 1.0.0-2 [8012 B] Get: 69 http://deb.debian.org/debian unstable/main amd64 flit all 3.9.0-2 [93.4 kB] Get: 70 http://deb.debian.org/debian unstable/main amd64 libaec0 amd64 1.1.3-1 [23.4 kB] Get: 71 http://deb.debian.org/debian unstable/main amd64 libblas3 amd64 3.12.0-3 [148 kB] Get: 72 http://deb.debian.org/debian unstable/main amd64 libsnappy1v5 amd64 1.2.1-1 [29.1 kB] Get: 73 http://deb.debian.org/debian unstable/main amd64 libblosc1 amd64 1.21.5+ds-1+b1 [49.6 kB] Get: 74 http://deb.debian.org/debian unstable/main amd64 libbrotli1 amd64 1.1.0-2+b3 [305 kB] Get: 75 http://deb.debian.org/debian unstable/main amd64 libcom-err2 amd64 1.47.1-1 [22.9 kB] Get: 76 http://deb.debian.org/debian unstable/main amd64 libkrb5support0 amd64 1.20.1-6+b1 [33.3 kB] Get: 77 http://deb.debian.org/debian unstable/main amd64 libk5crypto3 amd64 1.20.1-6+b1 [79.8 kB] Get: 78 http://deb.debian.org/debian unstable/main amd64 libkeyutils1 amd64 1.6.3-3 [8952 B] Get: 79 http://deb.debian.org/debian unstable/main amd64 libkrb5-3 amd64 1.20.1-6+b1 [333 kB] Get: 80 http://deb.debian.org/debian unstable/main amd64 libgssapi-krb5-2 amd64 1.20.1-6+b1 [135 kB] Get: 81 http://deb.debian.org/debian unstable/main amd64 libsasl2-modules-db amd64 2.1.28+dfsg1-6 [19.5 kB] Get: 82 http://deb.debian.org/debian unstable/main amd64 libsasl2-2 amd64 2.1.28+dfsg1-6 [56.9 kB] Get: 83 http://deb.debian.org/debian unstable/main amd64 libldap-2.5-0 amd64 2.5.17+dfsg-1 [186 kB] Get: 84 http://deb.debian.org/debian unstable/main amd64 libnghttp2-14 amd64 1.61.0-1+b1 [75.6 kB] Get: 85 http://deb.debian.org/debian unstable/main amd64 libpsl5t64 amd64 0.21.2-1.1 [56.8 kB] Get: 86 http://deb.debian.org/debian unstable/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d.1-2+b4 [58.5 kB] Get: 87 http://deb.debian.org/debian unstable/main amd64 libssh2-1t64 amd64 1.11.0-5 [215 kB] Get: 88 http://deb.debian.org/debian unstable/main amd64 libcurl4t64 amd64 8.8.0-1 [441 kB] Get: 89 http://deb.debian.org/debian unstable/main amd64 libgfortran5 amd64 14.1.0-1 [836 kB] Get: 90 http://deb.debian.org/debian unstable/main amd64 libsz2 amd64 1.1.3-1 [7740 B] Get: 91 http://deb.debian.org/debian unstable/main amd64 libhdf5-103-1t64 amd64 1.10.10+repack-3.3 [1241 kB] Get: 92 http://deb.debian.org/debian unstable/main amd64 libhdf5-hl-100t64 amd64 1.10.10+repack-3.3 [63.3 kB] Get: 93 http://deb.debian.org/debian unstable/main amd64 libjs-jquery-isonscreen all 1.2.0-1.1 [3196 B] Get: 94 http://deb.debian.org/debian unstable/main amd64 libjs-jquery-metadata all 12-4 [6532 B] Get: 95 http://deb.debian.org/debian unstable/main amd64 libjs-jquery-tablesorter all 1:2.31.3+dfsg1-3 [184 kB] Get: 96 http://deb.debian.org/debian unstable/main amd64 libjs-jquery-throttle-debounce all 1.1+dfsg.1-2 [12.2 kB] Get: 97 http://deb.debian.org/debian unstable/main amd64 libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [116 kB] Get: 98 http://deb.debian.org/debian unstable/main amd64 libjs-sphinxdoc all 7.2.6-8 [150 kB] Get: 99 http://deb.debian.org/debian unstable/main amd64 libjson-perl all 4.10000-1 [87.5 kB] Get: 100 http://deb.debian.org/debian unstable/main amd64 liblapack3 amd64 3.12.0-3 [2407 kB] Get: 101 http://deb.debian.org/debian unstable/main amd64 liblbfgsb0 amd64 3.0+dfsg.4-1+b1 [29.1 kB] Get: 102 http://deb.debian.org/debian unstable/main amd64 liblzf1 amd64 3.6-4+b1 [10.4 kB] Get: 103 http://deb.debian.org/debian unstable/main amd64 libpython3.12-stdlib amd64 3.12.3-1 [1951 kB] Get: 104 http://deb.debian.org/debian unstable/main amd64 libxslt1.1 amd64 1.1.35-1+b1 [232 kB] Get: 105 http://deb.debian.org/debian unstable/main amd64 libyaml-0-2 amd64 0.2.5-1+b1 [52.6 kB] Get: 106 http://deb.debian.org/debian unstable/main amd64 python3-typing-extensions all 4.11.0-1 [67.2 kB] Get: 107 http://deb.debian.org/debian unstable/main amd64 python3-more-itertools all 10.2.0-1 [59.9 kB] Get: 108 http://deb.debian.org/debian unstable/main amd64 python3-zipp all 1.0.0-6 [6696 B] Get: 109 http://deb.debian.org/debian unstable/main amd64 python3-importlib-metadata all 4.12.0-1 [24.9 kB] Get: 110 http://deb.debian.org/debian unstable/main amd64 python3-packaging all 24.0-1 [45.5 kB] Get: 111 http://deb.debian.org/debian unstable/main amd64 python3-pyproject-hooks all 1.0.0-2 [10.6 kB] Get: 112 http://deb.debian.org/debian unstable/main amd64 python3-toml all 0.10.2-1 [16.2 kB] Get: 113 http://deb.debian.org/debian unstable/main amd64 python3-wheel all 0.43.0-1 [52.5 kB] Get: 114 http://deb.debian.org/debian unstable/main amd64 python3-build all 1.2.1-1 [34.1 kB] Get: 115 http://deb.debian.org/debian unstable/main amd64 python3-installer all 0.7.0+dfsg1-3 [18.6 kB] Get: 116 http://deb.debian.org/debian unstable/main amd64 pybuild-plugin-pyproject all 6.20240422 [11.1 kB] Get: 117 http://deb.debian.org/debian unstable/main amd64 python-babel-localedata all 2.14.0-1 [5701 kB] Get: 118 http://deb.debian.org/debian unstable/main amd64 python3-alabaster all 0.7.12-1 [20.8 kB] Get: 119 http://deb.debian.org/debian unstable/main amd64 python3.12 amd64 3.12.3-1 [659 kB] Get: 120 http://deb.debian.org/debian unstable/main amd64 python3-all amd64 3.11.8-1 [1056 B] Get: 121 http://deb.debian.org/debian unstable/main amd64 python3-sniffio all 1.3.0-2 [7076 B] Get: 122 http://deb.debian.org/debian unstable/main amd64 python3-anyio all 4.3.0-1 [56.5 kB] Get: 123 http://deb.debian.org/debian unstable/main amd64 python3-array-api-compat all 1.4-1 [22.8 kB] Get: 124 http://deb.debian.org/debian unstable/main amd64 python3-asciitree all 0.3.3-4 [5612 B] Get: 125 http://deb.debian.org/debian unstable/main amd64 python3-tz all 2024.1-2 [30.9 kB] Get: 126 http://deb.debian.org/debian unstable/main amd64 python3-babel all 2.14.0-1 [111 kB] Get: 127 http://deb.debian.org/debian unstable/main amd64 python3-boltons all 24.0.0-1 [146 kB] Get: 128 http://deb.debian.org/debian unstable/main amd64 python3-soupsieve all 2.5-1 [38.1 kB] Get: 129 http://deb.debian.org/debian unstable/main amd64 python3-bs4 all 4.12.3-1 [133 kB] Get: 130 http://deb.debian.org/debian unstable/main amd64 python3-colorama all 0.4.6-4 [36.2 kB] Get: 131 http://deb.debian.org/debian unstable/main amd64 python3-click all 8.1.7-1 [94.0 kB] Get: 132 http://deb.debian.org/debian unstable/main amd64 python3-cloudpickle all 3.0.0-2 [25.4 kB] Get: 133 http://deb.debian.org/debian unstable/main amd64 python3-coverage amd64 7.2.7+dfsg1-1+b1 [170 kB] Get: 134 http://deb.debian.org/debian unstable/main amd64 python3-fsspec all 2024.3.1-1 [115 kB] Get: 135 http://deb.debian.org/debian unstable/main amd64 python3-toolz all 0.12.1-1 [43.9 kB] Get: 136 http://deb.debian.org/debian unstable/main amd64 python3-locket all 1.0.0-2 [5820 B] Get: 137 http://deb.debian.org/debian unstable/main amd64 python3-partd all 1.4.1-1 [15.2 kB] Get: 138 http://deb.debian.org/debian unstable/main amd64 python3-yaml amd64 6.0.1-2 [177 kB] Get: 139 http://deb.debian.org/debian unstable/main amd64 python3-dask all 2024.1.1+dfsg-1 [930 kB] Get: 140 http://deb.debian.org/debian unstable/main amd64 python3-dateutil all 2.9.0-2 [79.4 kB] Get: 141 http://deb.debian.org/debian unstable/main amd64 python3-decorator all 5.1.1-5 [15.1 kB] Get: 142 http://deb.debian.org/debian unstable/main amd64 python3-markupsafe amd64 2.1.5-1 [14.5 kB] Get: 143 http://deb.debian.org/debian unstable/main amd64 python3-jinja2 all 3.1.3-1 [119 kB] Get: 144 http://deb.debian.org/debian unstable/main amd64 python3-msgpack amd64 1.0.3-3+b1 [96.5 kB] Get: 145 http://deb.debian.org/debian unstable/main amd64 python3-psutil amd64 5.9.8-2 [225 kB] Get: 146 http://deb.debian.org/debian unstable/main amd64 python3-sortedcontainers all 2.4.0-2 [31.9 kB] Get: 147 http://deb.debian.org/debian unstable/main amd64 python3-tblib all 3.0.0-4 [13.5 kB] Get: 148 http://deb.debian.org/debian unstable/main amd64 python3-tornado amd64 6.4.0-1 [347 kB] Get: 149 http://deb.debian.org/debian unstable/main amd64 python3-zict all 3.0.0-2 [29.7 kB] Get: 150 http://deb.debian.org/debian unstable/main amd64 python3-distributed all 2023.12.1+ds-4 [1128 kB] Get: 151 http://deb.debian.org/debian unstable/main amd64 python3-et-xmlfile all 1.0.1-2.1 [9180 B] Get: 152 http://deb.debian.org/debian unstable/main amd64 python3-monotonic all 1.6-2 [5728 B] Get: 153 http://deb.debian.org/debian unstable/main amd64 python3-fasteners all 0.18-2 [14.0 kB] Get: 154 http://deb.debian.org/debian unstable/main amd64 python3-h11 all 0.14.0-1 [50.1 kB] Get: 155 http://deb.debian.org/debian unstable/main amd64 python3-numpy amd64 1:1.26.4+ds-10 [5465 kB] Get: 156 http://deb.debian.org/debian unstable/main amd64 python3-h5py-serial amd64 3.10.0-1+b3 [1400 kB] Get: 157 http://deb.debian.org/debian unstable/main amd64 python3-h5py all 3.10.0-1 [14.4 kB] Get: 158 http://deb.debian.org/debian unstable/main amd64 python3-pathspec all 0.12.1-1 [28.1 kB] Get: 159 http://deb.debian.org/debian unstable/main amd64 python3-pluggy all 1.5.0-1 [26.9 kB] Get: 160 http://deb.debian.org/debian unstable/main amd64 python3-trove-classifiers all 2024.1.31-1 [9968 B] Get: 161 http://deb.debian.org/debian unstable/main amd64 python3-hatchling all 1.24.2-1 [53.2 kB] Get: 162 http://deb.debian.org/debian unstable/main amd64 python3-setuptools-scm all 8.0.4-2 [39.5 kB] Get: 163 http://deb.debian.org/debian unstable/main amd64 python3-hatch-vcs all 0.4.0-1 [8336 B] Get: 164 http://deb.debian.org/debian unstable/main amd64 python3-httpcore all 1.0.4-1 [44.5 kB] Get: 165 http://deb.debian.org/debian unstable/main amd64 python3-pygments all 2.17.2+dfsg-1 [818 kB] Get: 166 http://deb.debian.org/debian unstable/main amd64 python3-mdurl all 0.1.2-1 [9444 B] Get: 167 http://deb.debian.org/debian unstable/main amd64 python3-markdown-it all 3.0.0-2 [62.5 kB] Get: 168 http://deb.debian.org/debian unstable/main amd64 python3-rich all 13.7.1-1 [201 kB] Get: 169 http://deb.debian.org/debian unstable/main amd64 python3-httpx all 0.27.0-1 [76.8 kB] Get: 170 http://deb.debian.org/debian unstable/main amd64 python3-imagesize all 1.4.1-1 [6688 B] Get: 171 http://deb.debian.org/debian unstable/main amd64 python3-iniconfig all 1.1.1-2 [6396 B] Get: 172 http://deb.debian.org/debian unstable/main amd64 python3-joblib all 1.3.2-2 [218 kB] Get: 173 http://deb.debian.org/debian unstable/main amd64 python3-lxml amd64 5.2.1-1 [1995 kB] Get: 174 http://deb.debian.org/debian unstable/main amd64 python3-natsort all 8.0.2-2 [39.0 kB] Get: 175 http://deb.debian.org/debian unstable/main amd64 python3-numcodecs amd64 0.12.1+ds-1+b1 [469 kB] Get: 176 http://deb.debian.org/debian unstable/main amd64 python3-openpyxl all 3.1.2+dfsg-6 [165 kB] Get: 177 http://deb.debian.org/debian unstable/main amd64 python3-pandas-lib amd64 2.1.4+dfsg-8 [7882 kB] Get: 178 http://deb.debian.org/debian unstable/main amd64 python3-pandas all 2.1.4+dfsg-8 [3015 kB] Get: 179 http://deb.debian.org/debian unstable/main amd64 sphinx-common all 7.2.6-8 [702 kB] Get: 180 http://deb.debian.org/debian unstable/main amd64 python3-snowballstemmer all 2.2.0-4 [58.0 kB] Get: 181 http://deb.debian.org/debian unstable/main amd64 python3-sphinx all 7.2.6-8 [552 kB] Get: 182 http://deb.debian.org/debian unstable/main amd64 python3-pydata-sphinx-theme all 0.15.2.is.0.7.2-1 [1076 kB] Get: 183 http://deb.debian.org/debian unstable/main amd64 python3-pytest all 8.1.2-1 [246 kB] Get: 184 http://deb.debian.org/debian unstable/main amd64 python3-pytest-cov all 5.0.0-1 [26.8 kB] Get: 185 http://deb.debian.org/debian unstable/main amd64 python3-pytest-mock all 3.12.0-1.1 [17.6 kB] Get: 186 http://deb.debian.org/debian unstable/main amd64 python3-scipy amd64 1.11.4-10 [19.5 MB] Get: 187 http://deb.debian.org/debian unstable/main amd64 python3-threadpoolctl all 3.1.0-1 [21.2 kB] Get: 188 http://deb.debian.org/debian unstable/main amd64 python3-sklearn-lib amd64 1.4.2+dfsg-1 [6606 kB] Get: 189 http://deb.debian.org/debian unstable/main amd64 python3-sklearn all 1.4.2+dfsg-1 [2247 kB] Get: 190 http://deb.debian.org/debian unstable/main amd64 python3-sphinx-copybutton all 0.4.0-5 [16.1 kB] Get: 191 http://deb.debian.org/debian unstable/main amd64 python3-xlrd all 2.0.1-2 [88.9 kB] Get: 192 http://deb.debian.org/debian unstable/main amd64 python3-zarr all 2.18.1+ds-1 [1311 kB] Fetched 108 MB in 8s (13.7 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libjs-jquery. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19718 files and directories currently installed.) Preparing to unpack .../libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... Selecting previously unselected package libjs-jquery-hotkeys. Preparing to unpack .../libjs-jquery-hotkeys_0~20130707+git2d51e3a9+dfsg-2.1_all.deb ... Unpacking libjs-jquery-hotkeys (0~20130707+git2d51e3a9+dfsg-2.1) ... Selecting previously unselected package libpython3.11-minimal:amd64. Preparing to unpack .../libpython3.11-minimal_3.11.9-1_amd64.deb ... Unpacking libpython3.11-minimal:amd64 (3.11.9-1) ... Selecting previously unselected package libexpat1:amd64. Preparing to unpack .../libexpat1_2.6.2-1_amd64.deb ... Unpacking libexpat1:amd64 (2.6.2-1) ... Selecting previously unselected package python3.11-minimal. Preparing to unpack .../python3.11-minimal_3.11.9-1_amd64.deb ... Unpacking python3.11-minimal (3.11.9-1) ... Setting up libpython3.11-minimal:amd64 (3.11.9-1) ... Setting up libexpat1:amd64 (2.6.2-1) ... Setting up python3.11-minimal (3.11.9-1) ... Selecting previously unselected package python3-minimal. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20060 files and directories currently installed.) Preparing to unpack .../0-python3-minimal_3.11.8-1_amd64.deb ... Unpacking python3-minimal (3.11.8-1) ... Selecting previously unselected package media-types. Preparing to unpack .../1-media-types_10.1.0_all.deb ... Unpacking media-types (10.1.0) ... Selecting previously unselected package netbase. Preparing to unpack .../2-netbase_6.4_all.deb ... Unpacking netbase (6.4) ... 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Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8 to /lib/x86_64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8.2 to /lib/x86_64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8 to /lib/x86_64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8.2 to /lib/x86_64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' Unpacking libreadline8t64:amd64 (8.2-4) ... Selecting previously unselected package libpython3.11-stdlib:amd64. Preparing to unpack .../6-libpython3.11-stdlib_3.11.9-1_amd64.deb ... Unpacking libpython3.11-stdlib:amd64 (3.11.9-1) ... Selecting previously unselected package python3.11. Preparing to unpack .../7-python3.11_3.11.9-1_amd64.deb ... Unpacking python3.11 (3.11.9-1) ... Selecting previously unselected package libpython3-stdlib:amd64. 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Setting up libpsl5t64:amd64 (0.21.2-1.1) ... Setting up libnghttp2-14:amd64 (1.61.0-1+b1) ... Setting up gettext-base (0.21-14+b1) ... Setting up m4 (1.4.19-4) ... Setting up libcom-err2:amd64 (1.47.1-1) ... Setting up file (1:5.45-3) ... Setting up libjs-jquery-throttle-debounce (1.1+dfsg.1-2) ... Setting up libaec0:amd64 (1.1.3-1) ... Setting up libelf1t64:amd64 (0.191-1+b1) ... Setting up python-babel-localedata (2.14.0-1) ... Setting up libsnappy1v5:amd64 (1.2.1-1) ... Setting up libkrb5support0:amd64 (1.20.1-6+b1) ... Setting up libsasl2-modules-db:amd64 (2.1.28+dfsg1-6) ... Setting up tzdata (2024a-4) ... Current default time zone: 'Etc/UTC' Local time is now: Sat Jun 28 18:35:03 UTC 2025. Universal Time is now: Sat Jun 28 18:35:03 UTC 2025. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up autotools-dev (20220109.1) ... Setting up libblas3:amd64 (3.12.0-3) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode Setting up librtmp1:amd64 (2.4+20151223.gitfa8646d.1-2+b4) ... Setting up liblzf1:amd64 (3.6-4+b1) ... Setting up libproc2-0:amd64 (2:4.0.4-4) ... Setting up autopoint (0.21-14) ... Setting up libk5crypto3:amd64 (1.20.1-6+b1) ... Setting up libsasl2-2:amd64 (2.1.28+dfsg1-6) ... Setting up libgfortran5:amd64 (14.1.0-1) ... Setting up autoconf (2.71-3) ... Setting up dwz (0.15-1+b1) ... Setting up sensible-utils (0.0.22) ... Setting up libuchardet0:amd64 (0.0.8-1+b1) ... Setting up procps (2:4.0.4-4) ... Setting up libjson-perl (4.10000-1) ... Setting up libblosc1:amd64 (1.21.5+ds-1+b1) ... Setting up netbase (6.4) ... Setting up sgml-base (1.31) ... Setting up libkrb5-3:amd64 (1.20.1-6+b1) ... Setting up libssh2-1t64:amd64 (1.11.0-5) ... Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... Setting up libjs-jquery-hotkeys (0~20130707+git2d51e3a9+dfsg-2.1) ... Setting up openssl (3.2.1-3) ... Setting up readline-common (8.2-4) ... Setting up libxml2:amd64 (2.12.7+dfsg-2) ... Setting up libsz2:amd64 (1.1.3-1) ... Setting up libjs-underscore (1.13.4~dfsg+~1.11.4-3) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.14.0-1) ... Setting up python3.12-minimal (3.12.3-1) ... Setting up liblapack3:amd64 (3.12.0-3) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode Setting up gettext (0.21-14+b1) ... Setting up libtool (2.4.7-7) ... Setting up libldap-2.5-0:amd64 (2.5.17+dfsg-1) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up ca-certificates (20240203) ... Updating certificates in /etc/ssl/certs... 146 added, 0 removed; done. Setting up libjs-jquery-metadata (12-4) ... Setting up libjs-jquery-isonscreen (1.2.0-1.1) ... Setting up libgssapi-krb5-2:amd64 (1.20.1-6+b1) ... Setting up libjs-sphinxdoc (7.2.6-8) ... Setting up libreadline8t64:amd64 (8.2-4) ... Setting up dh-strip-nondeterminism (1.14.0-1) ... Setting up libjs-jquery-tablesorter (1:2.31.3+dfsg1-3) ... Setting up groff-base (1.23.0-4) ... Setting up xml-core (0.19) ... Setting up libxslt1.1:amd64 (1.1.35-1+b1) ... Setting up liblbfgsb0:amd64 (3.0+dfsg.4-1+b1) ... Setting up libpython3.12-stdlib:amd64 (3.12.3-1) ... Setting up libcurl4t64:amd64 (8.8.0-1) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libpython3.11-stdlib:amd64 (3.11.9-1) ... Setting up python3.12 (3.12.3-1) ... Setting up man-db (2.12.1-1) ... Not building database; man-db/auto-update is not 'true'. Setting up sphinx-common (7.2.6-8) ... Setting up libhdf5-103-1t64:amd64 (1.10.10+repack-3.3) ... Setting up libpython3-stdlib:amd64 (3.11.8-1) ... Setting up libhdf5-hl-100t64:amd64 (1.10.10+repack-3.3) ... Setting up python3.11 (3.11.9-1) ... Setting up debhelper (13.15.3) ... Setting up python3 (3.11.8-1) ... Setting up python3-sortedcontainers (2.4.0-2) ... Setting up python3-markupsafe (2.1.5-1) ... Setting up python3-wheel (0.43.0-1) ... Setting up python3-psutil (5.9.8-2) ... Setting up python3-tz (2024.1-2) ... Setting up python3-natsort (8.0.2-2) ... Setting up python3-cloudpickle (3.0.0-2) ... Setting up python3-monotonic (1.6-2) ... Setting up python3-six (1.16.0-6) ... Setting up python3-roman (3.3-3) ... Setting up python3-decorator (5.1.1-5) ... Setting up python3-jinja2 (3.1.3-1) ... Setting up python3-packaging (24.0-1) ... Setting up python3-pyproject-hooks (1.0.0-2) ... Setting up python3-certifi (2023.11.17-1) ... Setting up python3-snowballstemmer (2.2.0-4) ... Setting up python3-mdurl (0.1.2-1) ... Setting up python3-idna (3.6-2) ... Setting up python3-h11 (0.14.0-1) ... Setting up python3-typing-extensions (4.11.0-1) ... Setting up python3-fasteners (0.18-2) ... Setting up python3-asciitree (0.3.3-4) ... Setting up python3-toml (0.10.2-1) ... Setting up python3-installer (0.7.0+dfsg1-3) ... Setting up python3-urllib3 (1.26.18-2) ... Setting up python3-pluggy (1.5.0-1) ... Setting up python3-markdown-it (3.0.0-2) ... Setting up python3-trove-classifiers (2024.1.31-1) ... Setting up python3-lxml:amd64 (5.2.1-1) ... Setting up python3-et-xmlfile (1.0.1-2.1) ... Setting up python3-xlrd (2.0.1-2) ... Setting up python3-toolz (0.12.1-1) ... Setting up python3-dateutil (2.9.0-2) ... Setting up python3-msgpack (1.0.3-3+b1) ... Setting up python3-build (1.2.1-1) ... Setting up python3-zict (3.0.0-2) ... Setting up python3-pathspec (0.12.1-1) ... Setting up python3-lib2to3 (3.12.3-3.1) ... Setting up python3-locket (1.0.0-2) ... Setting up python3-tomli-w (1.0.0-2) ... Setting up python3-soupsieve (2.5-1) ... Setting up python3-imagesize (1.4.1-1) ... Setting up python3-pkg-resources (68.1.2-2) ... Setting up python3-distutils (3.12.3-3.1) ... python3.12: can't get files for byte-compilation Setting up python3-partd (1.4.1-1) ... Setting up python3-more-itertools (10.2.0-1) ... Setting up python3-httpcore (1.0.4-1) ... Setting up python3-iniconfig (1.1.1-2) ... Setting up python3-sniffio (1.3.0-2) ... Setting up python3-tornado (6.4.0-1) ... Setting up python3-setuptools (68.1.2-2) ... Setting up python3-tblib (3.0.0-4) ... Setting up python3-anyio (4.3.0-1) ... Setting up python3-joblib (1.3.2-2) ... Setting up python3-babel (2.14.0-1) ... update-alternatives: using /usr/bin/pybabel-python3 to provide /usr/bin/pybabel (pybabel) in auto mode Setting up python3-colorama (0.4.6-4) ... Setting up python3-boltons (24.0.0-1) ... Setting up python3-charset-normalizer (3.3.2-1) ... Setting up python3-pytest (8.1.2-1) ... Setting up python3-alabaster (0.7.12-1) ... Setting up python3-fsspec (2024.3.1-1) ... Setting up python3-threadpoolctl (3.1.0-1) ... Setting up python3-array-api-compat (1.4-1) ... Setting up python3-all (3.11.8-1) ... Setting up python3-coverage (7.2.7+dfsg1-1+b1) ... Setting up python3-yaml (6.0.1-2) ... Setting up python3-pytest-cov (5.0.0-1) ... Setting up python3-zipp (1.0.0-6) ... Setting up python3-click (8.1.7-1) ... Setting up python3-setuptools-scm (8.0.4-2) ... Setting up python3-bs4 (4.12.3-1) ... Setting up python3-pygments (2.17.2+dfsg-1) ... Setting up python3-chardet (5.2.0+dfsg-1) ... Setting up python3-openpyxl (3.1.2+dfsg-6) ... Setting up python3-requests (2.31.0+dfsg-2) ... Setting up python3-numpy (1:1.26.4+ds-10) ... Setting up python3-pytest-mock (3.12.0-1.1) ... Setting up python3-hatchling (1.24.2-1) ... Setting up python3-hatch-vcs (0.4.0-1) ... Setting up dh-python (6.20240422) ... Setting up python3-scipy (1.11.4-10) ... Setting up python3-importlib-metadata (4.12.0-1) ... Setting up python3-rich (13.7.1-1) ... Setting up pybuild-plugin-pyproject (6.20240422) ... Setting up python3-numcodecs (0.12.1+ds-1+b1) ... Setting up python3-pandas-lib:amd64 (2.1.4+dfsg-8) ... Setting up python3-sklearn-lib:amd64 (1.4.2+dfsg-1) ... Setting up python3-dask (2024.1.1+dfsg-1) ... Setting up python3-h5py-serial (3.10.0-1+b3) ... Setting up python3-distributed (2023.12.1+ds-4) ... Setting up python3-pandas (2.1.4+dfsg-8) ... Setting up python3-httpx (0.27.0-1) ... Setting up python3-h5py (3.10.0-1) ... Setting up python3-sklearn (1.4.2+dfsg-1) ... Processing triggers for libc-bin (2.38-11) ... Processing triggers for sgml-base (1.31) ... Setting up docutils-common (0.20.1+dfsg-3) ... Processing triggers for sgml-base (1.31) ... Setting up python3-docutils (0.20.1+dfsg-3) ... Setting up flit (3.9.0-2) ... Setting up python3-sphinx (7.2.6-8) ... Setting up python3-sphinx-copybutton (0.4.0-5) ... Setting up python3-pydata-sphinx-theme (0.15.2.is.0.7.2-1) ... Setting up python3-zarr (2.18.1+ds-1) ... Processing triggers for ca-certificates (20240203) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/python-anndata-0.10.6/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../python-anndata_0.10.6-1_source.changes dpkg-buildpackage: info: source package python-anndata dpkg-buildpackage: info: source version 0.10.6-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Diane Trout dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 debian/rules clean dh clean --buildsystem=pybuild dh_auto_clean -O--buildsystem=pybuild dh_autoreconf_clean -O--buildsystem=pybuild dh_clean -O--buildsystem=pybuild debian/rules binary dh binary --buildsystem=pybuild dh_update_autotools_config -O--buildsystem=pybuild dh_autoreconf -O--buildsystem=pybuild dh_auto_configure -O--buildsystem=pybuild dh_auto_build -O--buildsystem=pybuild I: pybuild plugin_pyproject:129: Building wheel for python3.12 with "build" module I: pybuild base:311: python3.12 -m build --skip-dependency-check --no-isolation --wheel --outdir /build/reproducible-path/python-anndata-0.10.6/.pybuild/cpython3_3.12_anndata * Building wheel... Successfully built anndata-0.10.6-py3-none-any.whl I: pybuild plugin_pyproject:144: Unpacking wheel built for python3.12 with "installer" module I: pybuild plugin_pyproject:129: Building wheel for python3.11 with "build" module I: pybuild base:311: python3.11 -m build --skip-dependency-check --no-isolation --wheel --outdir /build/reproducible-path/python-anndata-0.10.6/.pybuild/cpython3_3.11_anndata * Building wheel... Successfully built anndata-0.10.6-py3-none-any.whl I: pybuild plugin_pyproject:144: Unpacking wheel built for python3.11 with "installer" module dh_auto_test -O--buildsystem=pybuild I: pybuild base:311: cd /build/reproducible-path/python-anndata-0.10.6/.pybuild/cpython3_3.12_anndata/build; python3.12 -m pytest -v ============================= test session starts ============================== platform linux -- Python 3.12.3, pytest-8.1.2, pluggy-1.5.0 -- /usr/bin/python3.12 cachedir: .pytest_cache rootdir: /build/reproducible-path/python-anndata-0.10.6/.pybuild/cpython3_3.12_anndata/build configfile: pyproject.toml testpaths: anndata, docs/concatenation.rst plugins: mock-3.12.0, cov-5.0.0, anyio-4.3.0 collecting ... collected 10 items anndata/_core/anndata.py::anndata._core.anndata.AnnData.concatenate PASSED [ 10%] anndata/_core/anndata.py::anndata._core.anndata.AnnData.obs_names_make_unique PASSED [ 20%] anndata/_core/anndata.py::anndata._core.anndata.AnnData.var_names_make_unique PASSED [ 30%] anndata/_core/merge.py::anndata._core.merge.concat PASSED [ 40%] anndata/_core/merge.py::anndata._core.merge.gen_reindexer PASSED [ 50%] anndata/_core/sparse_dataset.py::anndata._core.sparse_dataset.sparse_dataset PASSED [ 60%] anndata/_io/utils.py::anndata._io.utils.report_read_key_on_error PASSED [ 70%] anndata/_io/utils.py::anndata._io.utils.report_write_key_on_error PASSED [ 80%] anndata/_warnings.py::anndata._warnings.ImplicitModificationWarning PASSED [ 90%] anndata/utils.py::anndata.utils.make_index_unique PASSED [100%] =============================== warnings summary =============================== ../../../../../../usr/lib/python3/dist-packages/_pytest/config/__init__.py:1439 /usr/lib/python3/dist-packages/_pytest/config/__init__.py:1439: PytestConfigWarning: Unknown config option: filterwarnings_when_strict self._warn_or_fail_if_strict(f"Unknown config option: {key}\n") anndata/_core/anndata.py::anndata._core.anndata.AnnData.concatenate :1: FutureWarning: Use anndata.concat instead of AnnData.concatenate, AnnData.concatenate is deprecated and will be removed in the future. See the tutorial for concat at: https://anndata.readthedocs.io/en/latest/concatenation.html anndata/_core/anndata.py::anndata._core.anndata.AnnData.concatenate :1: FutureWarning: Use anndata.concat instead of AnnData.concatenate, AnnData.concatenate is deprecated and will be removed in the future. See the tutorial for concat at: https://anndata.readthedocs.io/en/latest/concatenation.html anndata/_core/anndata.py::anndata._core.anndata.AnnData.concatenate :1: FutureWarning: Use anndata.concat instead of AnnData.concatenate, AnnData.concatenate is deprecated and will be removed in the future. See the tutorial for concat at: https://anndata.readthedocs.io/en/latest/concatenation.html anndata/_core/anndata.py::anndata._core.anndata.AnnData.obs_names_make_unique anndata/_core/anndata.py::anndata._core.anndata.AnnData.var_names_make_unique anndata/utils.py::anndata.utils.make_index_unique /build/reproducible-path/python-anndata-0.10.6/.pybuild/cpython3_3.12_anndata/build/anndata/_core/anndata.py:1820: UserWarning: Variable names are not unique. To make them unique, call `.var_names_make_unique`. utils.warn_names_duplicates("var") anndata/_core/merge.py::anndata._core.merge.concat anndata/_core/merge.py::anndata._core.merge.concat anndata/_core/merge.py::anndata._core.merge.concat anndata/_core/merge.py::anndata._core.merge.concat /build/reproducible-path/python-anndata-0.10.6/.pybuild/cpython3_3.12_anndata/build/anndata/_core/aligned_df.py:67: ImplicitModificationWarning: Transforming to str index. warnings.warn("Transforming to str index.", ImplicitModificationWarning) anndata/_core/merge.py::anndata._core.merge.concat anndata/_core/merge.py::anndata._core.merge.concat anndata/_core/merge.py::anndata._core.merge.concat anndata/_core/merge.py::anndata._core.merge.concat /build/reproducible-path/python-anndata-0.10.6/.pybuild/cpython3_3.12_anndata/build/anndata/_core/anndata.py:1818: UserWarning: Observation names are not unique. To make them unique, call `.obs_names_make_unique`. utils.warn_names_duplicates("obs") -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html ======================= 10 passed, 15 warnings in 0.69s ======================== I: pybuild base:311: cd /build/reproducible-path/python-anndata-0.10.6/.pybuild/cpython3_3.11_anndata/build; python3.11 -m pytest -v ============================= test session starts ============================== platform linux -- Python 3.11.9, pytest-8.1.2, pluggy-1.5.0 -- /usr/bin/python3.11 cachedir: .pytest_cache rootdir: /build/reproducible-path/python-anndata-0.10.6/.pybuild/cpython3_3.11_anndata/build configfile: pyproject.toml testpaths: anndata, docs/concatenation.rst plugins: mock-3.12.0, cov-5.0.0, anyio-4.3.0 collecting ... collected 10 items anndata/_core/anndata.py::anndata._core.anndata.AnnData.concatenate PASSED [ 10%] anndata/_core/anndata.py::anndata._core.anndata.AnnData.obs_names_make_unique PASSED [ 20%] anndata/_core/anndata.py::anndata._core.anndata.AnnData.var_names_make_unique PASSED [ 30%] anndata/_core/merge.py::anndata._core.merge.concat PASSED [ 40%] anndata/_core/merge.py::anndata._core.merge.gen_reindexer PASSED [ 50%] anndata/_core/sparse_dataset.py::anndata._core.sparse_dataset.sparse_dataset PASSED [ 60%] anndata/_io/utils.py::anndata._io.utils.report_read_key_on_error PASSED [ 70%] anndata/_io/utils.py::anndata._io.utils.report_write_key_on_error PASSED [ 80%] anndata/_warnings.py::anndata._warnings.ImplicitModificationWarning PASSED [ 90%] anndata/utils.py::anndata.utils.make_index_unique PASSED [100%] =============================== warnings summary =============================== ../../../../../../usr/lib/python3/dist-packages/_pytest/config/__init__.py:1439 /usr/lib/python3/dist-packages/_pytest/config/__init__.py:1439: PytestConfigWarning: Unknown config option: filterwarnings_when_strict self._warn_or_fail_if_strict(f"Unknown config option: {key}\n") anndata/_core/anndata.py::anndata._core.anndata.AnnData.concatenate :1: FutureWarning: Use anndata.concat instead of AnnData.concatenate, AnnData.concatenate is deprecated and will be removed in the future. See the tutorial for concat at: https://anndata.readthedocs.io/en/latest/concatenation.html anndata/_core/anndata.py::anndata._core.anndata.AnnData.concatenate :1: FutureWarning: Use anndata.concat instead of AnnData.concatenate, AnnData.concatenate is deprecated and will be removed in the future. See the tutorial for concat at: https://anndata.readthedocs.io/en/latest/concatenation.html anndata/_core/anndata.py::anndata._core.anndata.AnnData.concatenate :1: FutureWarning: Use anndata.concat instead of AnnData.concatenate, AnnData.concatenate is deprecated and will be removed in the future. See the tutorial for concat at: https://anndata.readthedocs.io/en/latest/concatenation.html anndata/_core/anndata.py::anndata._core.anndata.AnnData.obs_names_make_unique anndata/_core/anndata.py::anndata._core.anndata.AnnData.var_names_make_unique anndata/utils.py::anndata.utils.make_index_unique /build/reproducible-path/python-anndata-0.10.6/.pybuild/cpython3_3.11_anndata/build/anndata/_core/anndata.py:1820: UserWarning: Variable names are not unique. To make them unique, call `.var_names_make_unique`. utils.warn_names_duplicates("var") anndata/_core/merge.py::anndata._core.merge.concat anndata/_core/merge.py::anndata._core.merge.concat anndata/_core/merge.py::anndata._core.merge.concat anndata/_core/merge.py::anndata._core.merge.concat /build/reproducible-path/python-anndata-0.10.6/.pybuild/cpython3_3.11_anndata/build/anndata/_core/aligned_df.py:67: ImplicitModificationWarning: Transforming to str index. warnings.warn("Transforming to str index.", ImplicitModificationWarning) anndata/_core/merge.py::anndata._core.merge.concat anndata/_core/merge.py::anndata._core.merge.concat anndata/_core/merge.py::anndata._core.merge.concat anndata/_core/merge.py::anndata._core.merge.concat /build/reproducible-path/python-anndata-0.10.6/.pybuild/cpython3_3.11_anndata/build/anndata/_core/anndata.py:1818: UserWarning: Observation names are not unique. To make them unique, call `.obs_names_make_unique`. utils.warn_names_duplicates("obs") -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html ======================= 10 passed, 15 warnings in 1.38s ======================== debian/rules execute_after_dh_auto_test make[1]: Entering directory '/build/reproducible-path/python-anndata-0.10.6' rm -v /build/reproducible-path/python-anndata-0.10.6/.pybuild/cpython3_*_anndata/build/test.h5ad removed '/build/reproducible-path/python-anndata-0.10.6/.pybuild/cpython3_3.11_anndata/build/test.h5ad' removed '/build/reproducible-path/python-anndata-0.10.6/.pybuild/cpython3_3.12_anndata/build/test.h5ad' rm -vr /build/reproducible-path/python-anndata-0.10.6/.pybuild/cpython3_*_anndata/build/tmp.zarr removed '/build/reproducible-path/python-anndata-0.10.6/.pybuild/cpython3_3.11_anndata/build/tmp.zarr/.zgroup' removed '/build/reproducible-path/python-anndata-0.10.6/.pybuild/cpython3_3.11_anndata/build/tmp.zarr/X/.zarray' removed '/build/reproducible-path/python-anndata-0.10.6/.pybuild/cpython3_3.11_anndata/build/tmp.zarr/X/0' removed directory '/build/reproducible-path/python-anndata-0.10.6/.pybuild/cpython3_3.11_anndata/build/tmp.zarr/X' removed directory '/build/reproducible-path/python-anndata-0.10.6/.pybuild/cpython3_3.11_anndata/build/tmp.zarr' removed '/build/reproducible-path/python-anndata-0.10.6/.pybuild/cpython3_3.12_anndata/build/tmp.zarr/.zgroup' removed '/build/reproducible-path/python-anndata-0.10.6/.pybuild/cpython3_3.12_anndata/build/tmp.zarr/X/.zarray' removed '/build/reproducible-path/python-anndata-0.10.6/.pybuild/cpython3_3.12_anndata/build/tmp.zarr/X/0' removed directory '/build/reproducible-path/python-anndata-0.10.6/.pybuild/cpython3_3.12_anndata/build/tmp.zarr/X' removed directory '/build/reproducible-path/python-anndata-0.10.6/.pybuild/cpython3_3.12_anndata/build/tmp.zarr' make[1]: Leaving directory '/build/reproducible-path/python-anndata-0.10.6' create-stamp debian/debhelper-build-stamp dh_testroot -O--buildsystem=pybuild dh_prep -O--buildsystem=pybuild dh_auto_install --destdir=debian/python3-anndata/ -O--buildsystem=pybuild I: pybuild plugin_pyproject:178: Copying package built for python3.12 to destdir I: pybuild plugin_pyproject:178: Copying package built for python3.11 to destdir dh_installdocs -O--buildsystem=pybuild dh_installchangelogs -O--buildsystem=pybuild dh_python3 -O--buildsystem=pybuild dh_installsystemduser -O--buildsystem=pybuild dh_perl -O--buildsystem=pybuild dh_link -O--buildsystem=pybuild dh_strip_nondeterminism -O--buildsystem=pybuild dh_compress -O--buildsystem=pybuild dh_fixperms -O--buildsystem=pybuild dh_missing -O--buildsystem=pybuild dh_installdeb -O--buildsystem=pybuild dh_gencontrol -O--buildsystem=pybuild dh_md5sums -O--buildsystem=pybuild dh_builddeb -O--buildsystem=pybuild dpkg-deb: building package 'python3-anndata' in '../python3-anndata_0.10.6-1_all.deb'. dpkg-genbuildinfo --build=binary -O../python-anndata_0.10.6-1_amd64.buildinfo dpkg-genchanges --build=binary -O../python-anndata_0.10.6-1_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: including full source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/1376825 and its subdirectories I: Current time: Sat Jun 28 06:41:28 -12 2025 I: pbuilder-time-stamp: 1751136088 Sun May 26 12:18:31 UTC 2024 I: 1st build successful. Starting 2nd build on remote node ionos1-amd64.debian.net. Sun May 26 12:18:31 UTC 2024 I: Preparing to do remote build '2' on ionos1-amd64.debian.net. Sun May 26 12:24:55 UTC 2024 I: Deleting $TMPDIR on ionos1-amd64.debian.net. Sun May 26 12:24:57 UTC 2024 I: python-anndata_0.10.6-1_amd64.changes: Format: 1.8 Date: Thu, 28 Mar 2024 18:36:47 -0700 Source: python-anndata Binary: python3-anndata Architecture: all Version: 0.10.6-1 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Diane Trout Description: python3-anndata - annotated gene by sample numpy matrix Closes: 1044072 Changes: python-anndata (0.10.6-1) unstable; urgency=medium . [ Andreas Tille ] * New upstream version (Closes: #1044072) * Build-Depends: s/dh-python/dh-sequence-python3/ (routine-update) * Set upstream metadata fields: Repository. * Build-Depends: python3-hatchling, python3-hatch-vcs, python3-httpx * Patch out the need for scanpy for documentation example . [ Diane Trout ] * Add python3-distributed as a build and autopkgtest dependency * Add skip-awkward.patch to tell pytest to skip tests that depend on awkward. * Add skip-cupy-tests.patch to skip cupy dependent tests. * New upstream release 0.10.6-1 * Refresh patches * Add python3-pytest-mock as test and autopkgtest dependency Checksums-Sha1: f3a9f072e6d90059afd4cb6688b91a3071e1ae83 10265 python-anndata_0.10.6-1_amd64.buildinfo ff562974c905725caa930f22431a376f7ec9a94b 89668 python3-anndata_0.10.6-1_all.deb Checksums-Sha256: 15e3a8d477d7388c0d26f27d821a452de92cf3b4da903d13ba138e29170ec305 10265 python-anndata_0.10.6-1_amd64.buildinfo f8f595a4f4a9cfe450021f7cb57c22ded022bd6f692895452725078a97d50ab0 89668 python3-anndata_0.10.6-1_all.deb Files: 0e14eed786b3f4197a453da3c8917516 10265 python optional python-anndata_0.10.6-1_amd64.buildinfo 27d8737b359329caa95ebe7216a3ab9f 89668 python optional python3-anndata_0.10.6-1_all.deb Sun May 26 12:24:58 UTC 2024 I: diffoscope 268 will be used to compare the two builds: Running as unit: rb-diffoscope-amd64_2-7948.service # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.rukLTbN0/python-anndata_0.10.6-1.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.rukLTbN0/python-anndata_0.10.6-1.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.rukLTbN0/python-anndata_0.10.6-1.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.rukLTbN0/b1/python-anndata_0.10.6-1_amd64.changes /srv/reproducible-results/rbuild-debian/r-b-build.rukLTbN0/b2/python-anndata_0.10.6-1_amd64.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 0.393s) 0.393s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.019s) 0.019s 12 calls diffoscope.comparators.binary.FilesystemFile ## specialize (total time: 0.000s) 0.000s 1 call specialize Finished with result: success Main processes terminated with: code=exited/status=0 Service runtime: 768ms CPU time consumed: 764ms Sun May 26 12:25:00 UTC 2024 I: diffoscope 268 found no differences in the changes files, and a .buildinfo file also exists. Sun May 26 12:25:00 UTC 2024 I: python-anndata from unstable built successfully and reproducibly on amd64. Sun May 26 12:25:01 UTC 2024 I: Submitting .buildinfo files to external archives: Sun May 26 12:25:01 UTC 2024 I: Submitting 12K b1/python-anndata_0.10.6-1_amd64.buildinfo.asc Sun May 26 12:25:02 UTC 2024 I: Submitting 12K b2/python-anndata_0.10.6-1_amd64.buildinfo.asc Sun May 26 12:25:03 UTC 2024 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Sun May 26 12:25:03 UTC 2024 I: Done submitting .buildinfo files. Sun May 26 12:25:03 UTC 2024 I: Removing signed python-anndata_0.10.6-1_amd64.buildinfo.asc files: removed './b1/python-anndata_0.10.6-1_amd64.buildinfo.asc' removed './b2/python-anndata_0.10.6-1_amd64.buildinfo.asc'