Sun May 26 08:34:18 UTC 2024 I: starting to build shapeit4/trixie/i386 on jenkins on '2024-05-26 08:33' Sun May 26 08:34:18 UTC 2024 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/i386_11/14126/console.log Sun May 26 08:34:18 UTC 2024 I: Downloading source for trixie/shapeit4=4.2.2+dfsg-1 --2024-05-26 08:34:19-- http://deb.debian.org/debian/pool/main/s/shapeit4/shapeit4_4.2.2%2bdfsg-1.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2134 (2.1K) [text/prs.lines.tag] Saving to: ‘shapeit4_4.2.2+dfsg-1.dsc’ 0K .. 100% 280M=0s 2024-05-26 08:34:19 (280 MB/s) - ‘shapeit4_4.2.2+dfsg-1.dsc’ saved [2134/2134] Sun May 26 08:34:19 UTC 2024 I: shapeit4_4.2.2+dfsg-1.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: shapeit4 Binary: shapeit4, shapeit4-example Architecture: any all Version: 4.2.2+dfsg-1 Maintainer: Debian Med Packaging Team Uploaders: Dylan Aïssi Homepage: https://odelaneau.github.io/shapeit4/ Standards-Version: 4.6.0 Vcs-Browser: https://salsa.debian.org/med-team/shapeit4 Vcs-Git: https://salsa.debian.org/med-team/shapeit4.git Testsuite: autopkgtest Build-Depends: debhelper-compat (= 13), libboost-iostreams-dev, libboost-program-options-dev, libbz2-dev, libhts-dev, libssl-dev Package-List: shapeit4 deb science optional arch=any shapeit4-example deb doc optional arch=all Checksums-Sha1: 74489c1b97358dbbfa9245812b131d8df69cc742 58962780 shapeit4_4.2.2+dfsg.orig.tar.xz e019b0ec958bd082337abbf437e5a1aea5d92a76 5200 shapeit4_4.2.2+dfsg-1.debian.tar.xz Checksums-Sha256: 0a8c5da94ab21a092a6acb77e795d91a40c5034a2ee80b9ffa679cd95114937c 58962780 shapeit4_4.2.2+dfsg.orig.tar.xz d42b9df3505c3874e9c18d676af83ef315e84afb57dc7036737a2f71af121bc0 5200 shapeit4_4.2.2+dfsg-1.debian.tar.xz Files: f3e35676c663d0ecba185a9b98cd95c5 58962780 shapeit4_4.2.2+dfsg.orig.tar.xz 0e07e040f73ac50205869fe79f473919 5200 shapeit4_4.2.2+dfsg-1.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQIzBAEBCgAdFiEEmjwHvQbeL0FugTpdYS7xYT4FD1QFAmFEidwACgkQYS7xYT4F D1Qb4RAAqTHiJ8+FbSoRqNnKtGk9hQXBr2hehl0lrN6zuc41Jk8wy8Q9mlOS3BSp Ki4oYYNjhTs8gLuttkdo4oRnF6DBeeqw8NTZ77osUkFYVZ7kJzokGvN+px/XKJDK uTAAllhoNIoUsA9iz0ACg4r6kAZJ5v/X5AoZ+Y+CQa5uUBzCFObtCIyj8Qyk7EIT dzWe4taxmUQaHmLSjtkGrk0bS6UiNoQzdqNpNZpRBrneKqyXYxA5Xy7rKfO5MeOE YO0Imv/Gtnvfz/3MXdtHWcwELvQZYmHrPymEqs7+ogElSKTMoOxyzOQ9t/2x6BRh dLZjS7vQmfAhfrMJRXChxUiD+m9cGif6lQSW8iVpnaUywMjgV4hwSysTmxpWiMZF 61wbV4yNu8SiemB36fN2vGbKmM6lvMrfTK5Hs9AP/VVxCPCVpreLfQ8arS624kaH vLr6LfMny44Hg3YtEf0bzJUZ9vc49Mb0DeQbIvEhJXP4xbQ0metnAkA18EH/3e+t VmQe19uJSV3R7UF+mfA7oLS5pDF+Ut21gRmcMwSuTqn4klWKD0PIJFj+aWHGKwPz qBHXc4WUJ2HcKj79h5e+OP6xLZoo4bWmzvf1nq+fTbJg+Oz6uE+KMjmy9r6ms13p jf9/Y1TxKqhrUC6PfV/xYoTtEIAJn+PHgcDmNvjm3+IHOojIATo= =RH/t -----END PGP SIGNATURE----- Sun May 26 08:34:19 UTC 2024 I: Checking whether the package is not for us Sun May 26 08:34:19 UTC 2024 I: Starting 1st build on remote node ionos6-i386.debian.net. Sun May 26 08:34:19 UTC 2024 I: Preparing to do remote build '1' on ionos6-i386.debian.net. Sun May 26 08:42:10 UTC 2024 I: Deleting $TMPDIR on ionos6-i386.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Sat Jun 28 02:57:37 -12 2025 I: pbuilder-time-stamp: 1751122657 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: using eatmydata during job I: Copying source file I: copying [shapeit4_4.2.2+dfsg-1.dsc] I: copying [./shapeit4_4.2.2+dfsg.orig.tar.xz] I: copying [./shapeit4_4.2.2+dfsg-1.debian.tar.xz] I: Extracting source gpgv: Signature made Fri Sep 17 12:28:12 2021 gpgv: using RSA key 9A3C07BD06DE2F416E813A5D612EF1613E050F54 gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./shapeit4_4.2.2+dfsg-1.dsc: no acceptable signature found dpkg-source: info: extracting shapeit4 in shapeit4-4.2.2+dfsg dpkg-source: info: unpacking shapeit4_4.2.2+dfsg.orig.tar.xz dpkg-source: info: unpacking shapeit4_4.2.2+dfsg-1.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying use_shared_libs.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/12218/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='i386' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=22 ' DISTRIBUTION='trixie' HOME='/root' HOST_ARCH='i386' IFS=' ' INVOCATION_ID='0824b0f011394984b36fb5d897604114' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' LD_LIBRARY_PATH='/usr/lib/libeatmydata' LD_PRELOAD='libeatmydata.so' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='12218' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.uuZuo4Nt/pbuilderrc_jgii --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.uuZuo4Nt/b1 --logfile b1/build.log shapeit4_4.2.2+dfsg-1.dsc' SUDO_GID='112' SUDO_UID='107' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://213.165.73.152:3128' I: uname -a Linux ionos6-i386 6.1.0-21-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.90-1 (2024-05-03) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Jun 25 17:47 /bin -> usr/bin I: user script /srv/workspace/pbuilder/12218/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: i386 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), libboost-iostreams-dev, libboost-program-options-dev, libbz2-dev, libhts-dev, libssl-dev dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19685 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on libboost-iostreams-dev; however: Package libboost-iostreams-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-program-options-dev; however: Package libboost-program-options-dev is not installed. pbuilder-satisfydepends-dummy depends on libbz2-dev; however: Package libbz2-dev is not installed. pbuilder-satisfydepends-dummy depends on libhts-dev; however: Package libhts-dev is not installed. pbuilder-satisfydepends-dummy depends on libssl-dev; however: Package libssl-dev is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} icu-devtools{a} intltool-debian{a} libarchive-zip-perl{a} libboost-iostreams-dev{a} libboost-iostreams1.83-dev{a} libboost-program-options-dev{a} libboost-program-options1.83-dev{a} libboost-program-options1.83.0{a} libboost-regex1.83-dev{a} libboost-regex1.83.0{a} libboost1.83-dev{a} libbrotli1{a} libbz2-dev{a} libcom-err2{a} libcurl3t64-gnutls{a} libcurl4-gnutls-dev{a} libdebhelper-perl{a} libdeflate-dev{a} libdeflate0{a} libelf1t64{a} libfile-stripnondeterminism-perl{a} libgssapi-krb5-2{a} libhts-dev{a} libhts3t64{a} libhtscodecs2{a} libicu-dev{a} libicu72{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} libldap-2.5-0{a} liblzma-dev{a} libmagic-mgc{a} libmagic1t64{a} libnghttp2-14{a} libpipeline1{a} libpsl5t64{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libssh2-1t64{a} libssl-dev{a} libtool{a} libuchardet0{a} libxml2{a} m4{a} man-db{a} po-debconf{a} sensible-utils{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: bzip2-doc ca-certificates curl krb5-locales libarchive-cpio-perl libldap-common libltdl-dev libmail-sendmail-perl libsasl2-modules lynx publicsuffix wget 0 packages upgraded, 64 newly installed, 0 to remove and 0 not upgraded. Need to get 51.4 MB of archives. After unpacking 325 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian trixie/main i386 sensible-utils all 0.0.22 [22.4 kB] Get: 2 http://deb.debian.org/debian trixie/main i386 libmagic-mgc i386 1:5.45-3 [314 kB] Get: 3 http://deb.debian.org/debian trixie/main i386 libmagic1t64 i386 1:5.45-3 [114 kB] Get: 4 http://deb.debian.org/debian trixie/main i386 file i386 1:5.45-3 [42.9 kB] Get: 5 http://deb.debian.org/debian trixie/main i386 gettext-base i386 0.21-14+b1 [162 kB] Get: 6 http://deb.debian.org/debian trixie/main i386 libuchardet0 i386 0.0.8-1+b1 [69.1 kB] Get: 7 http://deb.debian.org/debian trixie/main i386 groff-base i386 1.23.0-4 [1194 kB] Get: 8 http://deb.debian.org/debian trixie/main i386 bsdextrautils i386 2.40.1-1 [98.5 kB] Get: 9 http://deb.debian.org/debian trixie/main i386 libpipeline1 i386 1.5.7-2 [39.7 kB] Get: 10 http://deb.debian.org/debian trixie/main i386 man-db i386 2.12.1-1 [1421 kB] Get: 11 http://deb.debian.org/debian trixie/main i386 m4 i386 1.4.19-4 [293 kB] Get: 12 http://deb.debian.org/debian trixie/main i386 autoconf all 2.71-3 [332 kB] Get: 13 http://deb.debian.org/debian trixie/main i386 autotools-dev all 20220109.1 [51.6 kB] Get: 14 http://deb.debian.org/debian trixie/main i386 automake all 1:1.16.5-1.3 [823 kB] Get: 15 http://deb.debian.org/debian trixie/main i386 autopoint all 0.21-14 [496 kB] Get: 16 http://deb.debian.org/debian trixie/main i386 libdebhelper-perl all 13.15.3 [88.0 kB] Get: 17 http://deb.debian.org/debian trixie/main i386 libtool all 2.4.7-7 [517 kB] Get: 18 http://deb.debian.org/debian trixie/main i386 dh-autoreconf all 20 [17.1 kB] Get: 19 http://deb.debian.org/debian trixie/main i386 libarchive-zip-perl all 1.68-1 [104 kB] Get: 20 http://deb.debian.org/debian trixie/main i386 libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB] Get: 21 http://deb.debian.org/debian trixie/main i386 dh-strip-nondeterminism all 1.14.0-1 [8448 B] Get: 22 http://deb.debian.org/debian trixie/main i386 libelf1t64 i386 0.191-1+b1 [194 kB] Get: 23 http://deb.debian.org/debian trixie/main i386 dwz i386 0.15-1+b1 [116 kB] Get: 24 http://deb.debian.org/debian trixie/main i386 libicu72 i386 72.1-4+b1 [9549 kB] Get: 25 http://deb.debian.org/debian trixie/main i386 libxml2 i386 2.9.14+dfsg-1.3+b3 [727 kB] Get: 26 http://deb.debian.org/debian trixie/main i386 gettext i386 0.21-14+b1 [1311 kB] Get: 27 http://deb.debian.org/debian trixie/main i386 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 28 http://deb.debian.org/debian trixie/main i386 po-debconf all 1.0.21+nmu1 [248 kB] Get: 29 http://deb.debian.org/debian trixie/main i386 debhelper all 13.15.3 [901 kB] Get: 30 http://deb.debian.org/debian trixie/main i386 icu-devtools i386 72.1-4+b1 [216 kB] Get: 31 http://deb.debian.org/debian trixie/main i386 libboost1.83-dev i386 1.83.0-2.1+b1 [10.6 MB] Get: 32 http://deb.debian.org/debian trixie/main i386 libboost-regex1.83.0 i386 1.83.0-2.1+b1 [328 kB] Get: 33 http://deb.debian.org/debian trixie/main i386 libicu-dev i386 72.1-4+b1 [10.6 MB] Get: 34 http://deb.debian.org/debian trixie/main i386 libboost-regex1.83-dev i386 1.83.0-2.1+b1 [347 kB] Get: 35 http://deb.debian.org/debian trixie/main i386 libboost-iostreams1.83-dev i386 1.83.0-2.1+b1 [264 kB] Get: 36 http://deb.debian.org/debian trixie/main i386 libboost-iostreams-dev i386 1.83.0.2+b2 [3588 B] Get: 37 http://deb.debian.org/debian trixie/main i386 libboost-program-options1.83.0 i386 1.83.0-2.1+b1 [358 kB] Get: 38 http://deb.debian.org/debian trixie/main i386 libboost-program-options1.83-dev i386 1.83.0-2.1+b1 [388 kB] Get: 39 http://deb.debian.org/debian trixie/main i386 libboost-program-options-dev i386 1.83.0.2+b2 [3616 B] Get: 40 http://deb.debian.org/debian trixie/main i386 libbrotli1 i386 1.1.0-2+b3 [314 kB] Get: 41 http://deb.debian.org/debian trixie/main i386 libbz2-dev i386 1.0.8-5.1 [31.4 kB] Get: 42 http://deb.debian.org/debian trixie/main i386 libcom-err2 i386 1.47.1-1 [23.1 kB] Get: 43 http://deb.debian.org/debian trixie/main i386 libkrb5support0 i386 1.20.1-6+b1 [36.1 kB] Get: 44 http://deb.debian.org/debian trixie/main i386 libk5crypto3 i386 1.20.1-6+b1 [83.2 kB] Get: 45 http://deb.debian.org/debian trixie/main i386 libkeyutils1 i386 1.6.3-3 [9432 B] Get: 46 http://deb.debian.org/debian trixie/main i386 libkrb5-3 i386 1.20.1-6+b1 [360 kB] Get: 47 http://deb.debian.org/debian trixie/main i386 libgssapi-krb5-2 i386 1.20.1-6+b1 [145 kB] Get: 48 http://deb.debian.org/debian trixie/main i386 libsasl2-modules-db i386 2.1.28+dfsg1-6 [20.5 kB] Get: 49 http://deb.debian.org/debian trixie/main i386 libsasl2-2 i386 2.1.28+dfsg1-6 [60.6 kB] Get: 50 http://deb.debian.org/debian trixie/main i386 libldap-2.5-0 i386 2.5.17+dfsg-1 [198 kB] Get: 51 http://deb.debian.org/debian trixie/main i386 libnghttp2-14 i386 1.61.0-1+b1 [84.0 kB] Get: 52 http://deb.debian.org/debian trixie/main i386 libpsl5t64 i386 0.21.2-1.1 [57.4 kB] Get: 53 http://deb.debian.org/debian trixie/main i386 librtmp1 i386 2.4+20151223.gitfa8646d.1-2+b4 [62.0 kB] Get: 54 http://deb.debian.org/debian trixie/main i386 libssh2-1t64 i386 1.11.0-5 [225 kB] Get: 55 http://deb.debian.org/debian trixie/main i386 libcurl3t64-gnutls i386 8.8.0-1 [469 kB] Get: 56 http://deb.debian.org/debian trixie/main i386 libcurl4-gnutls-dev i386 8.8.0-1 [593 kB] Get: 57 http://deb.debian.org/debian trixie/main i386 libdeflate0 i386 1.20-1 [46.9 kB] Get: 58 http://deb.debian.org/debian trixie/main i386 libdeflate-dev i386 1.20-1 [56.0 kB] Get: 59 http://deb.debian.org/debian trixie/main i386 libhtscodecs2 i386 1.6.0-1+b1 [68.5 kB] Get: 60 http://deb.debian.org/debian trixie/main i386 libhts3t64 i386 1.19+ds-1.1+b1 [491 kB] Get: 61 http://deb.debian.org/debian trixie/main i386 liblzma-dev i386 5.6.1+really5.4.5-1 [304 kB] Get: 62 http://deb.debian.org/debian trixie/main i386 zlib1g-dev i386 1:1.3.dfsg+really1.3.1-1 [915 kB] Get: 63 http://deb.debian.org/debian trixie/main i386 libhts-dev i386 1.19+ds-1.1+b1 [1660 kB] Get: 64 http://deb.debian.org/debian trixie/main i386 libssl-dev i386 3.2.1-3 [2744 kB] Fetched 51.4 MB in 3s (16.1 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package sensible-utils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19685 files and directories currently installed.) Preparing to unpack .../00-sensible-utils_0.0.22_all.deb ... Unpacking sensible-utils (0.0.22) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../01-libmagic-mgc_1%3a5.45-3_i386.deb ... Unpacking libmagic-mgc (1:5.45-3) ... Selecting previously unselected package libmagic1t64:i386. Preparing to unpack .../02-libmagic1t64_1%3a5.45-3_i386.deb ... Unpacking libmagic1t64:i386 (1:5.45-3) ... Selecting previously unselected package file. Preparing to unpack .../03-file_1%3a5.45-3_i386.deb ... Unpacking file (1:5.45-3) ... Selecting previously unselected package gettext-base. Preparing to unpack .../04-gettext-base_0.21-14+b1_i386.deb ... Unpacking gettext-base (0.21-14+b1) ... Selecting previously unselected package libuchardet0:i386. Preparing to unpack .../05-libuchardet0_0.0.8-1+b1_i386.deb ... Unpacking libuchardet0:i386 (0.0.8-1+b1) ... Selecting previously unselected package groff-base. Preparing to unpack .../06-groff-base_1.23.0-4_i386.deb ... Unpacking groff-base (1.23.0-4) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../07-bsdextrautils_2.40.1-1_i386.deb ... Unpacking bsdextrautils (2.40.1-1) ... Selecting previously unselected package libpipeline1:i386. Preparing to unpack .../08-libpipeline1_1.5.7-2_i386.deb ... Unpacking libpipeline1:i386 (1.5.7-2) ... Selecting previously unselected package man-db. Preparing to unpack .../09-man-db_2.12.1-1_i386.deb ... Unpacking man-db (2.12.1-1) ... Selecting previously unselected package m4. Preparing to unpack .../10-m4_1.4.19-4_i386.deb ... Unpacking m4 (1.4.19-4) ... Selecting previously unselected package autoconf. Preparing to unpack .../11-autoconf_2.71-3_all.deb ... Unpacking autoconf (2.71-3) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../12-autotools-dev_20220109.1_all.deb ... Unpacking autotools-dev (20220109.1) ... Selecting previously unselected package automake. Preparing to unpack .../13-automake_1%3a1.16.5-1.3_all.deb ... Unpacking automake (1:1.16.5-1.3) ... Selecting previously unselected package autopoint. Preparing to unpack .../14-autopoint_0.21-14_all.deb ... Unpacking autopoint (0.21-14) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../15-libdebhelper-perl_13.15.3_all.deb ... Unpacking libdebhelper-perl (13.15.3) ... Selecting previously unselected package libtool. Preparing to unpack .../16-libtool_2.4.7-7_all.deb ... Unpacking libtool (2.4.7-7) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../17-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../18-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../19-libfile-stripnondeterminism-perl_1.14.0-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.14.0-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../20-dh-strip-nondeterminism_1.14.0-1_all.deb ... Unpacking dh-strip-nondeterminism (1.14.0-1) ... Selecting previously unselected package libelf1t64:i386. Preparing to unpack .../21-libelf1t64_0.191-1+b1_i386.deb ... Unpacking libelf1t64:i386 (0.191-1+b1) ... Selecting previously unselected package dwz. Preparing to unpack .../22-dwz_0.15-1+b1_i386.deb ... Unpacking dwz (0.15-1+b1) ... Selecting previously unselected package libicu72:i386. Preparing to unpack .../23-libicu72_72.1-4+b1_i386.deb ... Unpacking libicu72:i386 (72.1-4+b1) ... Selecting previously unselected package libxml2:i386. Preparing to unpack .../24-libxml2_2.9.14+dfsg-1.3+b3_i386.deb ... Unpacking libxml2:i386 (2.9.14+dfsg-1.3+b3) ... Selecting previously unselected package gettext. Preparing to unpack .../25-gettext_0.21-14+b1_i386.deb ... Unpacking gettext (0.21-14+b1) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../26-intltool-debian_0.35.0+20060710.6_all.deb ... Unpacking intltool-debian (0.35.0+20060710.6) ... Selecting previously unselected package po-debconf. Preparing to unpack .../27-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../28-debhelper_13.15.3_all.deb ... Unpacking debhelper (13.15.3) ... Selecting previously unselected package icu-devtools. Preparing to unpack .../29-icu-devtools_72.1-4+b1_i386.deb ... Unpacking icu-devtools (72.1-4+b1) ... Selecting previously unselected package libboost1.83-dev:i386. Preparing to unpack .../30-libboost1.83-dev_1.83.0-2.1+b1_i386.deb ... Unpacking libboost1.83-dev:i386 (1.83.0-2.1+b1) ... Selecting previously unselected package libboost-regex1.83.0:i386. Preparing to unpack .../31-libboost-regex1.83.0_1.83.0-2.1+b1_i386.deb ... Unpacking libboost-regex1.83.0:i386 (1.83.0-2.1+b1) ... Selecting previously unselected package libicu-dev:i386. Preparing to unpack .../32-libicu-dev_72.1-4+b1_i386.deb ... Unpacking libicu-dev:i386 (72.1-4+b1) ... Selecting previously unselected package libboost-regex1.83-dev:i386. Preparing to unpack .../33-libboost-regex1.83-dev_1.83.0-2.1+b1_i386.deb ... Unpacking libboost-regex1.83-dev:i386 (1.83.0-2.1+b1) ... Selecting previously unselected package libboost-iostreams1.83-dev:i386. Preparing to unpack .../34-libboost-iostreams1.83-dev_1.83.0-2.1+b1_i386.deb ... Unpacking libboost-iostreams1.83-dev:i386 (1.83.0-2.1+b1) ... Selecting previously unselected package libboost-iostreams-dev:i386. Preparing to unpack .../35-libboost-iostreams-dev_1.83.0.2+b2_i386.deb ... Unpacking libboost-iostreams-dev:i386 (1.83.0.2+b2) ... Selecting previously unselected package libboost-program-options1.83.0:i386. Preparing to unpack .../36-libboost-program-options1.83.0_1.83.0-2.1+b1_i386.deb ... Unpacking libboost-program-options1.83.0:i386 (1.83.0-2.1+b1) ... Selecting previously unselected package libboost-program-options1.83-dev:i386. Preparing to unpack .../37-libboost-program-options1.83-dev_1.83.0-2.1+b1_i386.deb ... Unpacking libboost-program-options1.83-dev:i386 (1.83.0-2.1+b1) ... Selecting previously unselected package libboost-program-options-dev:i386. Preparing to unpack .../38-libboost-program-options-dev_1.83.0.2+b2_i386.deb ... Unpacking libboost-program-options-dev:i386 (1.83.0.2+b2) ... Selecting previously unselected package libbrotli1:i386. Preparing to unpack .../39-libbrotli1_1.1.0-2+b3_i386.deb ... Unpacking libbrotli1:i386 (1.1.0-2+b3) ... Selecting previously unselected package libbz2-dev:i386. Preparing to unpack .../40-libbz2-dev_1.0.8-5.1_i386.deb ... Unpacking libbz2-dev:i386 (1.0.8-5.1) ... Selecting previously unselected package libcom-err2:i386. Preparing to unpack .../41-libcom-err2_1.47.1-1_i386.deb ... Unpacking libcom-err2:i386 (1.47.1-1) ... Selecting previously unselected package libkrb5support0:i386. Preparing to unpack .../42-libkrb5support0_1.20.1-6+b1_i386.deb ... Unpacking libkrb5support0:i386 (1.20.1-6+b1) ... Selecting previously unselected package libk5crypto3:i386. Preparing to unpack .../43-libk5crypto3_1.20.1-6+b1_i386.deb ... Unpacking libk5crypto3:i386 (1.20.1-6+b1) ... Selecting previously unselected package libkeyutils1:i386. Preparing to unpack .../44-libkeyutils1_1.6.3-3_i386.deb ... Unpacking libkeyutils1:i386 (1.6.3-3) ... Selecting previously unselected package libkrb5-3:i386. Preparing to unpack .../45-libkrb5-3_1.20.1-6+b1_i386.deb ... Unpacking libkrb5-3:i386 (1.20.1-6+b1) ... Selecting previously unselected package libgssapi-krb5-2:i386. Preparing to unpack .../46-libgssapi-krb5-2_1.20.1-6+b1_i386.deb ... Unpacking libgssapi-krb5-2:i386 (1.20.1-6+b1) ... Selecting previously unselected package libsasl2-modules-db:i386. Preparing to unpack .../47-libsasl2-modules-db_2.1.28+dfsg1-6_i386.deb ... Unpacking libsasl2-modules-db:i386 (2.1.28+dfsg1-6) ... Selecting previously unselected package libsasl2-2:i386. Preparing to unpack .../48-libsasl2-2_2.1.28+dfsg1-6_i386.deb ... Unpacking libsasl2-2:i386 (2.1.28+dfsg1-6) ... Selecting previously unselected package libldap-2.5-0:i386. Preparing to unpack .../49-libldap-2.5-0_2.5.17+dfsg-1_i386.deb ... Unpacking libldap-2.5-0:i386 (2.5.17+dfsg-1) ... Selecting previously unselected package libnghttp2-14:i386. Preparing to unpack .../50-libnghttp2-14_1.61.0-1+b1_i386.deb ... Unpacking libnghttp2-14:i386 (1.61.0-1+b1) ... Selecting previously unselected package libpsl5t64:i386. Preparing to unpack .../51-libpsl5t64_0.21.2-1.1_i386.deb ... Unpacking libpsl5t64:i386 (0.21.2-1.1) ... Selecting previously unselected package librtmp1:i386. Preparing to unpack .../52-librtmp1_2.4+20151223.gitfa8646d.1-2+b4_i386.deb ... Unpacking librtmp1:i386 (2.4+20151223.gitfa8646d.1-2+b4) ... Selecting previously unselected package libssh2-1t64:i386. Preparing to unpack .../53-libssh2-1t64_1.11.0-5_i386.deb ... Unpacking libssh2-1t64:i386 (1.11.0-5) ... Selecting previously unselected package libcurl3t64-gnutls:i386. Preparing to unpack .../54-libcurl3t64-gnutls_8.8.0-1_i386.deb ... Unpacking libcurl3t64-gnutls:i386 (8.8.0-1) ... Selecting previously unselected package libcurl4-gnutls-dev:i386. Preparing to unpack .../55-libcurl4-gnutls-dev_8.8.0-1_i386.deb ... Unpacking libcurl4-gnutls-dev:i386 (8.8.0-1) ... Selecting previously unselected package libdeflate0:i386. Preparing to unpack .../56-libdeflate0_1.20-1_i386.deb ... Unpacking libdeflate0:i386 (1.20-1) ... Selecting previously unselected package libdeflate-dev:i386. Preparing to unpack .../57-libdeflate-dev_1.20-1_i386.deb ... Unpacking libdeflate-dev:i386 (1.20-1) ... Selecting previously unselected package libhtscodecs2:i386. Preparing to unpack .../58-libhtscodecs2_1.6.0-1+b1_i386.deb ... Unpacking libhtscodecs2:i386 (1.6.0-1+b1) ... Selecting previously unselected package libhts3t64:i386. Preparing to unpack .../59-libhts3t64_1.19+ds-1.1+b1_i386.deb ... Unpacking libhts3t64:i386 (1.19+ds-1.1+b1) ... Selecting previously unselected package liblzma-dev:i386. Preparing to unpack .../60-liblzma-dev_5.6.1+really5.4.5-1_i386.deb ... Unpacking liblzma-dev:i386 (5.6.1+really5.4.5-1) ... Selecting previously unselected package zlib1g-dev:i386. Preparing to unpack .../61-zlib1g-dev_1%3a1.3.dfsg+really1.3.1-1_i386.deb ... Unpacking zlib1g-dev:i386 (1:1.3.dfsg+really1.3.1-1) ... Selecting previously unselected package libhts-dev:i386. Preparing to unpack .../62-libhts-dev_1.19+ds-1.1+b1_i386.deb ... Unpacking libhts-dev:i386 (1.19+ds-1.1+b1) ... Selecting previously unselected package libssl-dev:i386. Preparing to unpack .../63-libssl-dev_3.2.1-3_i386.deb ... Unpacking libssl-dev:i386 (3.2.1-3) ... Setting up libhtscodecs2:i386 (1.6.0-1+b1) ... Setting up libpipeline1:i386 (1.5.7-2) ... Setting up libboost-program-options1.83.0:i386 (1.83.0-2.1+b1) ... Setting up libkeyutils1:i386 (1.6.3-3) ... Setting up libboost1.83-dev:i386 (1.83.0-2.1+b1) ... Setting up libicu72:i386 (72.1-4+b1) ... Setting up bsdextrautils (2.40.1-1) ... Setting up libmagic-mgc (1:5.45-3) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libboost-regex1.83.0:i386 (1.83.0-2.1+b1) ... Setting up libdebhelper-perl (13.15.3) ... Setting up libbrotli1:i386 (1.1.0-2+b3) ... Setting up libmagic1t64:i386 (1:5.45-3) ... Setting up libboost-program-options1.83-dev:i386 (1.83.0-2.1+b1) ... Setting up libpsl5t64:i386 (0.21.2-1.1) ... Setting up libnghttp2-14:i386 (1.61.0-1+b1) ... Setting up libdeflate0:i386 (1.20-1) ... Setting up gettext-base (0.21-14+b1) ... Setting up m4 (1.4.19-4) ... Setting up libcom-err2:i386 (1.47.1-1) ... Setting up file (1:5.45-3) ... Setting up libelf1t64:i386 (0.191-1+b1) ... Setting up libkrb5support0:i386 (1.20.1-6+b1) ... Setting up libsasl2-modules-db:i386 (2.1.28+dfsg1-6) ... Setting up autotools-dev (20220109.1) ... Setting up libboost-program-options-dev:i386 (1.83.0.2+b2) ... Setting up librtmp1:i386 (2.4+20151223.gitfa8646d.1-2+b4) ... Setting up libssl-dev:i386 (3.2.1-3) ... Setting up autopoint (0.21-14) ... Setting up icu-devtools (72.1-4+b1) ... Setting up libk5crypto3:i386 (1.20.1-6+b1) ... Setting up libsasl2-2:i386 (2.1.28+dfsg1-6) ... Setting up autoconf (2.71-3) ... Setting up liblzma-dev:i386 (5.6.1+really5.4.5-1) ... Setting up zlib1g-dev:i386 (1:1.3.dfsg+really1.3.1-1) ... Setting up dwz (0.15-1+b1) ... Setting up sensible-utils (0.0.22) ... Setting up libuchardet0:i386 (0.0.8-1+b1) ... Setting up libkrb5-3:i386 (1.20.1-6+b1) ... Setting up libssh2-1t64:i386 (1.11.0-5) ... Setting up libdeflate-dev:i386 (1.20-1) ... Setting up libicu-dev:i386 (72.1-4+b1) ... Setting up libxml2:i386 (2.9.14+dfsg-1.3+b3) ... Setting up libbz2-dev:i386 (1.0.8-5.1) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.14.0-1) ... Setting up gettext (0.21-14+b1) ... Setting up libtool (2.4.7-7) ... Setting up libldap-2.5-0:i386 (2.5.17+dfsg-1) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up libgssapi-krb5-2:i386 (1.20.1-6+b1) ... Setting up libboost-regex1.83-dev:i386 (1.83.0-2.1+b1) ... Setting up dh-strip-nondeterminism (1.14.0-1) ... Setting up groff-base (1.23.0-4) ... Setting up libboost-iostreams1.83-dev:i386 (1.83.0-2.1+b1) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libcurl3t64-gnutls:i386 (8.8.0-1) ... Setting up libboost-iostreams-dev:i386 (1.83.0.2+b2) ... Setting up libcurl4-gnutls-dev:i386 (8.8.0-1) ... Setting up man-db (2.12.1-1) ... Not building database; man-db/auto-update is not 'true'. Setting up libhts3t64:i386 (1.19+ds-1.1+b1) ... Setting up libhts-dev:i386 (1.19+ds-1.1+b1) ... Setting up debhelper (13.15.3) ... Processing triggers for libc-bin (2.38-11) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/shapeit4-4.2.2+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../shapeit4_4.2.2+dfsg-1_source.changes dpkg-buildpackage: info: source package shapeit4 dpkg-buildpackage: info: source version 4.2.2+dfsg-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Dylan Aïssi dpkg-source --before-build . dpkg-buildpackage: info: host architecture i386 debian/rules clean dh clean dh_auto_clean make -j22 clean make[1]: Entering directory '/build/reproducible-path/shapeit4-4.2.2+dfsg' rm -f obj/*.o bin/shapeit4.2 make[1]: Leaving directory '/build/reproducible-path/shapeit4-4.2.2+dfsg' dh_clean debian/rules binary dh binary dh_update_autotools_config dh_autoreconf dh_auto_configure dh_auto_build make -j22 "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/reproducible-path/shapeit4-4.2.2+dfsg' g++ -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/shapeit4-4.2.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -c src/containers/variant_map.cpp -o obj/variant_map.o -Isrc -I/build/reproducible-path/shapeit4-4.2.2+dfsg/debian/.debhelper/generated/_source/home/Tools/htslib-1.11 -I/usr/include g++ -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/shapeit4-4.2.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -c src/containers/genotype_set.cpp -o obj/genotype_set.o -Isrc -I/build/reproducible-path/shapeit4-4.2.2+dfsg/debian/.debhelper/generated/_source/home/Tools/htslib-1.11 -I/usr/include g++ -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/shapeit4-4.2.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -c src/containers/bitmatrix.cpp -o obj/bitmatrix.o -Isrc -I/build/reproducible-path/shapeit4-4.2.2+dfsg/debian/.debhelper/generated/_source/home/Tools/htslib-1.11 -I/usr/include g++ -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/shapeit4-4.2.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -c src/containers/haplotype_set.cpp -o obj/haplotype_set.o -Isrc -I/build/reproducible-path/shapeit4-4.2.2+dfsg/debian/.debhelper/generated/_source/home/Tools/htslib-1.11 -I/usr/include g++ -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/shapeit4-4.2.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -c src/io/genotype_reader1.cpp -o obj/genotype_reader1.o -Isrc -I/build/reproducible-path/shapeit4-4.2.2+dfsg/debian/.debhelper/generated/_source/home/Tools/htslib-1.11 -I/usr/include g++ -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/shapeit4-4.2.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -c src/io/genotype_reader2.cpp -o obj/genotype_reader2.o -Isrc -I/build/reproducible-path/shapeit4-4.2.2+dfsg/debian/.debhelper/generated/_source/home/Tools/htslib-1.11 -I/usr/include g++ -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/shapeit4-4.2.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -c src/io/gmap_reader.cpp -o obj/gmap_reader.o -Isrc -I/build/reproducible-path/shapeit4-4.2.2+dfsg/debian/.debhelper/generated/_source/home/Tools/htslib-1.11 -I/usr/include g++ -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/shapeit4-4.2.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -c src/io/graph_writer.cpp -o obj/graph_writer.o -Isrc -I/build/reproducible-path/shapeit4-4.2.2+dfsg/debian/.debhelper/generated/_source/home/Tools/htslib-1.11 -I/usr/include g++ -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/shapeit4-4.2.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -c src/io/haplotype_writer.cpp -o obj/haplotype_writer.o -Isrc -I/build/reproducible-path/shapeit4-4.2.2+dfsg/debian/.debhelper/generated/_source/home/Tools/htslib-1.11 -I/usr/include g++ -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/shapeit4-4.2.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -c src/models/haplotype_segment_double.cpp -o obj/haplotype_segment_double.o -Isrc -I/build/reproducible-path/shapeit4-4.2.2+dfsg/debian/.debhelper/generated/_source/home/Tools/htslib-1.11 -I/usr/include g++ -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/shapeit4-4.2.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -c src/models/haplotype_segment_single.cpp -o obj/haplotype_segment_single.o -Isrc -I/build/reproducible-path/shapeit4-4.2.2+dfsg/debian/.debhelper/generated/_source/home/Tools/htslib-1.11 -I/usr/include g++ -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/shapeit4-4.2.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -c src/objects/hmm_parameters.cpp -o obj/hmm_parameters.o -Isrc -I/build/reproducible-path/shapeit4-4.2.2+dfsg/debian/.debhelper/generated/_source/home/Tools/htslib-1.11 -I/usr/include g++ -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/shapeit4-4.2.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -c src/objects/variant.cpp -o obj/variant.o -Isrc -I/build/reproducible-path/shapeit4-4.2.2+dfsg/debian/.debhelper/generated/_source/home/Tools/htslib-1.11 -I/usr/include g++ -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/shapeit4-4.2.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -c src/objects/compute_job.cpp -o obj/compute_job.o -Isrc -I/build/reproducible-path/shapeit4-4.2.2+dfsg/debian/.debhelper/generated/_source/home/Tools/htslib-1.11 -I/usr/include g++ -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/shapeit4-4.2.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -c src/objects/genotype/genotype_sweep.cpp -o obj/genotype_sweep.o -Isrc -I/build/reproducible-path/shapeit4-4.2.2+dfsg/debian/.debhelper/generated/_source/home/Tools/htslib-1.11 -I/usr/include g++ -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/shapeit4-4.2.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -c src/objects/genotype/genotype_mask.cpp -o obj/genotype_mask.o -Isrc -I/build/reproducible-path/shapeit4-4.2.2+dfsg/debian/.debhelper/generated/_source/home/Tools/htslib-1.11 -I/usr/include g++ -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/shapeit4-4.2.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -c src/objects/genotype/genotype_build.cpp -o obj/genotype_build.o -Isrc -I/build/reproducible-path/shapeit4-4.2.2+dfsg/debian/.debhelper/generated/_source/home/Tools/htslib-1.11 -I/usr/include g++ -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/shapeit4-4.2.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -c src/objects/genotype/genotype_managment.cpp -o obj/genotype_managment.o -Isrc -I/build/reproducible-path/shapeit4-4.2.2+dfsg/debian/.debhelper/generated/_source/home/Tools/htslib-1.11 -I/usr/include g++ -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/shapeit4-4.2.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -c src/objects/genotype/genotype_prune.cpp -o obj/genotype_prune.o -Isrc -I/build/reproducible-path/shapeit4-4.2.2+dfsg/debian/.debhelper/generated/_source/home/Tools/htslib-1.11 -I/usr/include g++ -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/shapeit4-4.2.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -c src/phaser/phaser_finalise.cpp -o obj/phaser_finalise.o -Isrc -I/build/reproducible-path/shapeit4-4.2.2+dfsg/debian/.debhelper/generated/_source/home/Tools/htslib-1.11 -I/usr/include g++ -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/shapeit4-4.2.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -c src/phaser/phaser_parameters.cpp -o obj/phaser_parameters.o -Isrc -I/build/reproducible-path/shapeit4-4.2.2+dfsg/debian/.debhelper/generated/_source/home/Tools/htslib-1.11 -I/usr/include g++ -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/shapeit4-4.2.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -c src/phaser/phaser_initialise.cpp -o obj/phaser_initialise.o -Isrc -I/build/reproducible-path/shapeit4-4.2.2+dfsg/debian/.debhelper/generated/_source/home/Tools/htslib-1.11 -I/usr/include In file included from src/containers/haplotype_set.h:27, from src/objects/compute_job.h:27, from src/models/haplotype_segment_single.h:26, from src/phaser/phaser_header.h:29, from src/phaser/phaser_finalise.cpp:22: src/containers/bitmatrix.h: In function 'unsigned int abracadabra(const unsigned int&, const unsigned int&)': src/containers/bitmatrix.h:28:116: warning: right shift count >= width of type [-Wshift-count-overflow] 28 | return static_cast((static_cast(i1) * static_cast(i2)) >> 32); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ In file included from src/containers/haplotype_set.h:27, from src/objects/compute_job.h:27, from src/models/haplotype_segment_single.h:26, from src/phaser/phaser_header.h:29, from src/phaser/phaser_parameters.cpp:23: src/containers/bitmatrix.h: In function 'unsigned int abracadabra(const unsigned int&, const unsigned int&)': src/containers/bitmatrix.h:28:116: warning: right shift count >= width of type [-Wshift-count-overflow] 28 | return static_cast((static_cast(i1) * static_cast(i2)) >> 32); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ In file included from src/containers/bitmatrix.cpp:22: src/containers/bitmatrix.h: In function 'unsigned int abracadabra(const unsigned int&, const unsigned int&)': src/containers/bitmatrix.h:28:116: warning: right shift count >= width of type [-Wshift-count-overflow] 28 | return static_cast((static_cast(i1) * static_cast(i2)) >> 32); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ In file included from src/containers/haplotype_set.h:27, from src/containers/haplotype_set.cpp:22: src/containers/bitmatrix.h: In function 'unsigned int abracadabra(const unsigned int&, const unsigned int&)': src/containers/bitmatrix.h:28:116: warning: right shift count >= width of type [-Wshift-count-overflow] 28 | return static_cast((static_cast(i1) * static_cast(i2)) >> 32); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ In file included from src/containers/haplotype_set.h:27, from src/io/haplotype_writer.h:28, from src/io/haplotype_writer.cpp:22: src/containers/bitmatrix.h: In function 'unsigned int abracadabra(const unsigned int&, const unsigned int&)': src/containers/bitmatrix.h:28:116: warning: right shift count >= width of type [-Wshift-count-overflow] 28 | return static_cast((static_cast(i1) * static_cast(i2)) >> 32); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ In file included from src/containers/haplotype_set.h:27, from src/objects/compute_job.h:27, from src/objects/compute_job.cpp:22: src/containers/bitmatrix.h: In function 'unsigned int abracadabra(const unsigned int&, const unsigned int&)': src/containers/bitmatrix.h:28:116: warning: right shift count >= width of type [-Wshift-count-overflow] 28 | return static_cast((static_cast(i1) * static_cast(i2)) >> 32); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ In file included from src/containers/haplotype_set.h:27, from src/objects/compute_job.h:27, from src/models/haplotype_segment_single.h:26, from src/phaser/phaser_header.h:29, from src/phaser/phaser_initialise.cpp:22: src/containers/bitmatrix.h: In function 'unsigned int abracadabra(const unsigned int&, const unsigned int&)': src/containers/bitmatrix.h:28:116: warning: right shift count >= width of type [-Wshift-count-overflow] 28 | return static_cast((static_cast(i1) * static_cast(i2)) >> 32); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ In file included from src/containers/haplotype_set.h:27, from src/io/genotype_reader.h:28, from src/io/genotype_reader2.cpp:22: src/containers/bitmatrix.h: In function 'unsigned int abracadabra(const unsigned int&, const unsigned int&)': src/containers/bitmatrix.h:28:116: warning: right shift count >= width of type [-Wshift-count-overflow] 28 | return static_cast((static_cast(i1) * static_cast(i2)) >> 32); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ In file included from src/containers/haplotype_set.h:27, from src/objects/compute_job.h:27, from src/models/haplotype_segment_single.h:26, from src/models/haplotype_segment_single.cpp:22: src/containers/bitmatrix.h: In function 'unsigned int abracadabra(const unsigned int&, const unsigned int&)': src/containers/bitmatrix.h:28:116: warning: right shift count >= width of type [-Wshift-count-overflow] 28 | return static_cast((static_cast(i1) * static_cast(i2)) >> 32); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ In file included from src/containers/haplotype_set.h:27, from src/io/genotype_reader.h:28, from src/io/genotype_reader1.cpp:22: src/containers/bitmatrix.h: In function 'unsigned int abracadabra(const unsigned int&, const unsigned int&)': src/containers/bitmatrix.h:28:116: warning: right shift count >= width of type [-Wshift-count-overflow] 28 | return static_cast((static_cast(i1) * static_cast(i2)) >> 32); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ g++ -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/shapeit4-4.2.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -c src/phaser/phaser_algorithm.cpp -o obj/phaser_algorithm.o -Isrc -I/build/reproducible-path/shapeit4-4.2.2+dfsg/debian/.debhelper/generated/_source/home/Tools/htslib-1.11 -I/usr/include g++ -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/shapeit4-4.2.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -c src/phaser/phaser_management.cpp -o obj/phaser_management.o -Isrc -I/build/reproducible-path/shapeit4-4.2.2+dfsg/debian/.debhelper/generated/_source/home/Tools/htslib-1.11 -I/usr/include In file included from src/containers/haplotype_set.h:27, from src/objects/compute_job.h:27, from src/models/haplotype_segment_double.h:26, from src/models/haplotype_segment_double.cpp:22: src/containers/bitmatrix.h: In function 'unsigned int abracadabra(const unsigned int&, const unsigned int&)': src/containers/bitmatrix.h:28:116: warning: right shift count >= width of type [-Wshift-count-overflow] 28 | return static_cast((static_cast(i1) * static_cast(i2)) >> 32); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ g++ -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/shapeit4-4.2.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -c src/modules/pbwt_solver.cpp -o obj/pbwt_solver.o -Isrc -I/build/reproducible-path/shapeit4-4.2.2+dfsg/debian/.debhelper/generated/_source/home/Tools/htslib-1.11 -I/usr/include g++ -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/shapeit4-4.2.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -c src/modules/builder.cpp -o obj/builder.o -Isrc -I/build/reproducible-path/shapeit4-4.2.2+dfsg/debian/.debhelper/generated/_source/home/Tools/htslib-1.11 -I/usr/include g++ -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/shapeit4-4.2.2+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -c src/main.cpp -o obj/main.o -Isrc -I/build/reproducible-path/shapeit4-4.2.2+dfsg/debian/.debhelper/generated/_source/home/Tools/htslib-1.11 -I/usr/include In file included from src/containers/haplotype_set.h:27, from src/objects/compute_job.h:27, from src/models/haplotype_segment_single.h:26, from src/phaser/phaser_header.h:29, from src/phaser/phaser_algorithm.cpp:22: src/containers/bitmatrix.h: In function 'unsigned int abracadabra(const unsigned int&, const unsigned int&)': src/containers/bitmatrix.h:28:116: warning: right shift count >= width of type [-Wshift-count-overflow] 28 | return static_cast((static_cast(i1) * static_cast(i2)) >> 32); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ In file included from src/containers/haplotype_set.h:27, from src/modules/pbwt_solver.h:26, from src/modules/pbwt_solver.cpp:22: src/containers/bitmatrix.h: In function 'unsigned int abracadabra(const unsigned int&, const unsigned int&)': src/containers/bitmatrix.h:28:116: warning: right shift count >= width of type [-Wshift-count-overflow] 28 | return static_cast((static_cast(i1) * static_cast(i2)) >> 32); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ In file included from src/containers/haplotype_set.h:27, from src/objects/compute_job.h:27, from src/models/haplotype_segment_single.h:26, from src/phaser/phaser_header.h:29, from src/phaser/phaser_management.cpp:22: src/containers/bitmatrix.h: In function 'unsigned int abracadabra(const unsigned int&, const unsigned int&)': src/containers/bitmatrix.h:28:116: warning: right shift count >= width of type [-Wshift-count-overflow] 28 | return static_cast((static_cast(i1) * static_cast(i2)) >> 32); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ In file included from src/containers/haplotype_set.h:27, from src/objects/compute_job.h:27, from src/models/haplotype_segment_single.h:26, from src/phaser/phaser_header.h:29, from src/main.cpp:23: src/containers/bitmatrix.h: In function 'unsigned int abracadabra(const unsigned int&, const unsigned int&)': src/containers/bitmatrix.h:28:116: warning: right shift count >= width of type [-Wshift-count-overflow] 28 | return static_cast((static_cast(i1) * static_cast(i2)) >> 32); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ g++ -std=c++11 -Wl,-z,relro -Wl,-z,now -O3 obj/variant_map.o obj/genotype_set.o obj/bitmatrix.o obj/haplotype_set.o obj/genotype_reader1.o obj/genotype_reader2.o obj/gmap_reader.o obj/graph_writer.o obj/haplotype_writer.o obj/haplotype_segment_double.o obj/haplotype_segment_single.o obj/hmm_parameters.o obj/variant.o obj/compute_job.o obj/genotype_sweep.o obj/genotype_mask.o obj/genotype_build.o obj/genotype_managment.o obj/genotype_prune.o obj/phaser_finalise.o obj/phaser_parameters.o obj/phaser_initialise.o obj/phaser_algorithm.o obj/phaser_management.o obj/pbwt_solver.o obj/builder.o obj/main.o -lhts -lboost_iostreams -lboost_program_options -o bin/shapeit4.2 -lz -lbz2 -lm -lpthread -llzma -lcurl -lssl -lcrypto make[1]: Leaving directory '/build/reproducible-path/shapeit4-4.2.2+dfsg' dh_auto_test create-stamp debian/debhelper-build-stamp dh_prep dh_auto_install dh_install dh_installdocs dh_installchangelogs dh_installman dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'shapeit4-example' in '../shapeit4-example_4.2.2+dfsg-1_all.deb'. dpkg-deb: building package 'shapeit4-dbgsym' in '../shapeit4-dbgsym_4.2.2+dfsg-1_i386.deb'. dpkg-deb: building package 'shapeit4' in '../shapeit4_4.2.2+dfsg-1_i386.deb'. dpkg-genbuildinfo --build=binary -O../shapeit4_4.2.2+dfsg-1_i386.buildinfo dpkg-genchanges --build=binary -O../shapeit4_4.2.2+dfsg-1_i386.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: including full source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/12218 and its subdirectories I: Current time: Sat Jun 28 03:05:02 -12 2025 I: pbuilder-time-stamp: 1751123102 Sun May 26 08:42:11 UTC 2024 I: 1st build successful. Starting 2nd build on remote node ionos2-i386.debian.net. Sun May 26 08:42:11 UTC 2024 I: Preparing to do remote build '2' on ionos2-i386.debian.net. Sun May 26 08:43:45 UTC 2024 I: Deleting $TMPDIR on ionos2-i386.debian.net. Sun May 26 08:43:45 UTC 2024 I: shapeit4_4.2.2+dfsg-1_i386.changes: Format: 1.8 Date: Fri, 17 Sep 2021 14:24:24 +0200 Source: shapeit4 Binary: shapeit4 shapeit4-dbgsym shapeit4-example Architecture: i386 all Version: 4.2.2+dfsg-1 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Dylan Aïssi Description: shapeit4 - fast and accurate method for estimation of haplotypes (phasing) shapeit4-example - fast and accurate method for estimation of haplotypes (phasing) - Changes: shapeit4 (4.2.2+dfsg-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.6.0 (routine-update) Checksums-Sha1: 3177ef132bdb35ae9c3500c3a4f9105c6543f547 3915480 shapeit4-dbgsym_4.2.2+dfsg-1_i386.deb a0588f1806e27c38f76a91eeb42755d10af8e573 52265128 shapeit4-example_4.2.2+dfsg-1_all.deb 578ff54049b9d027471a7ee66bb376148480846b 6817 shapeit4_4.2.2+dfsg-1_i386.buildinfo eb4a81cc1b8ed141cba89cd91ee919dbb744f185 213928 shapeit4_4.2.2+dfsg-1_i386.deb Checksums-Sha256: c064820e5e3a7e64ee95fee70161906a6485b778c739325c75c5a946ebf4b451 3915480 shapeit4-dbgsym_4.2.2+dfsg-1_i386.deb e162c54fc9f9620323c2c1d4f4bf49943e8a7dee7541bc98f4512e8c7d97bff2 52265128 shapeit4-example_4.2.2+dfsg-1_all.deb 05a935e93a82a5de74eb90bae3354f094213e8b47145f0914f2819dab08529d7 6817 shapeit4_4.2.2+dfsg-1_i386.buildinfo 1b7ad336f1153a5ac6020a289fbac223090140549556b13b4eeffc3a1f014ce1 213928 shapeit4_4.2.2+dfsg-1_i386.deb Files: fd18012da8ddf628adcb48fe0013a014 3915480 debug optional shapeit4-dbgsym_4.2.2+dfsg-1_i386.deb 6d47a24ae760e549febabe0ddd725e99 52265128 doc optional shapeit4-example_4.2.2+dfsg-1_all.deb 9baf39dc0077fc693fd7e3476c7fadb4 6817 science optional shapeit4_4.2.2+dfsg-1_i386.buildinfo 8678dc78f8ba232d22fe09051ecc78f5 213928 science optional shapeit4_4.2.2+dfsg-1_i386.deb Sun May 26 08:43:47 UTC 2024 I: diffoscope 268 will be used to compare the two builds: Running as unit: rb-diffoscope-i386_11-14126.service # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.uuZuo4Nt/shapeit4_4.2.2+dfsg-1.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.uuZuo4Nt/shapeit4_4.2.2+dfsg-1.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.uuZuo4Nt/shapeit4_4.2.2+dfsg-1.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.uuZuo4Nt/b1/shapeit4_4.2.2+dfsg-1_i386.changes /srv/reproducible-results/rbuild-debian/r-b-build.uuZuo4Nt/b2/shapeit4_4.2.2+dfsg-1_i386.changes ## close_archive (total time: 0.001s) 0.000s 20 calls diffoscope.comparators.xz.XzContainer 0.000s 10 calls diffoscope.comparators.deb.DebContainer 0.000s 14 calls diffoscope.comparators.tar.TarContainer 0.000s 6 calls diffoscope.comparators.deb.DebTarContainer ## command (total time: 326.439s) 160.156s 1034 calls readelf 148.772s 117 calls diff 15.427s 176 calls objdump 1.100s 2 calls objcopy 0.632s 20 calls xz 0.189s 22 calls strings 0.080s 1 call cmp 0.080s 1 call cmp (external) 0.002s 18 calls cmp (internal) ## compare_files (cumulative) (total time: 1009.812s) 193.327s 1 call abc.DotChangesFile 193.176s 2 calls abc.DebFile 193.085s 4 calls abc.XzFile 192.672s 2 calls abc.DebDataTarFile 192.208s 2 calls abc.ElfFile 43.512s 10 calls diffoscope.comparators.elf.ElfCodeSection 0.965s 35 calls diffoscope.comparators.elf.ElfSection 0.768s 3 calls diffoscope.comparators.elf.ElfStringSection 0.062s 2 calls abc.TarFile 0.014s 1 call abc.TextFile 0.011s 1 call diffoscope.comparators.elf.MonkeyPatchedElfSection 0.011s 2 calls abc.Md5sumsFile ## container_extract (total time: 0.998s) 0.633s 20 calls diffoscope.comparators.xz.XzContainer 0.305s 24 calls diffoscope.comparators.deb.DebContainer 0.048s 12 calls diffoscope.comparators.deb.DebTarContainer 0.011s 18 calls diffoscope.comparators.tar.TarContainer ## diff (total time: 10.736s) 10.736s 1107 calls linediff ## has_same_content_as (total time: 0.085s) 0.081s 3 calls abc.DebFile 0.001s 4 calls abc.Md5sumsFile 0.001s 4 calls abc.TextFile 0.001s 3 calls diffoscope.comparators.utils.libarchive.LibarchiveSymlink 0.000s 2 calls abc.DebDataTarFile 0.000s 4 calls abc.XzFile 0.000s 35 calls diffoscope.comparators.elf.ElfSection 0.000s 2 calls abc.ElfFile 0.000s 2 calls abc.TarFile 0.000s 1 call abc.DotChangesFile 0.000s 10 calls diffoscope.comparators.elf.ElfCodeSection 0.000s 3 calls diffoscope.comparators.elf.ElfStringSection 0.000s 1 call diffoscope.comparators.elf.MonkeyPatchedElfSection ## main (total time: 224.842s) 224.842s 2 calls outputs 0.001s 1 call cleanup ## open_archive (total time: 0.001s) 0.000s 20 calls diffoscope.comparators.xz.XzContainer 0.000s 14 calls diffoscope.comparators.tar.TarContainer 0.000s 10 calls diffoscope.comparators.deb.DebContainer 0.000s 6 calls diffoscope.comparators.deb.DebTarContainer ## output (total time: 30.512s) 20.648s 1 call html 5.919s 1 call text 3.945s 1 call json ## recognizes (total time: 1.542s) 0.615s 12 calls diffoscope.comparators.binary.FilesystemFile 0.441s 1808 calls diffoscope.comparators.utils.libarchive.LibarchiveMember 0.364s 900 calls diffoscope.comparators.utils.archive.ArchiveMember 0.121s 324 calls diffoscope.comparators.debian.DebControlMember ## specialize (total time: 0.153s) 0.153s 74 calls specialize Finished with result: success Main processes terminated with: code=exited/status=1 Service runtime: 3min 45.227s CPU time consumed: 4min 35.412s Sun May 26 08:47:34 UTC 2024 W: Diffoscope claims the build is reproducible, but there is a diffoscope file. Please investigate. Sun May 26 08:47:34 UTC 2024 E: shapeit4 failed to build reproducibly in trixie on i386. Sun May 26 08:49:57 UTC 2024 I: Submitting .buildinfo files to external archives: Sun May 26 08:49:57 UTC 2024 I: Submitting 8.0K b1/shapeit4_4.2.2+dfsg-1_i386.buildinfo.asc Sun May 26 08:49:59 UTC 2024 I: Submitting 8.0K b2/shapeit4_4.2.2+dfsg-1_i386.buildinfo.asc Sun May 26 08:50:00 UTC 2024 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Sun May 26 08:50:00 UTC 2024 I: Done submitting .buildinfo files. Sun May 26 08:50:00 UTC 2024 I: Removing signed shapeit4_4.2.2+dfsg-1_i386.buildinfo.asc files: removed './b1/shapeit4_4.2.2+dfsg-1_i386.buildinfo.asc' removed './b2/shapeit4_4.2.2+dfsg-1_i386.buildinfo.asc'